Query 013079
Match_columns 450
No_of_seqs 427 out of 3493
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 00:11:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013079.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013079hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 4.7E-64 1E-68 489.2 40.1 386 38-442 5-395 (396)
2 COG2873 MET17 O-acetylhomoseri 100.0 3.7E-63 8.1E-68 461.7 33.8 388 38-441 5-425 (426)
3 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 4.7E-62 1E-66 481.9 41.5 376 43-440 2-386 (386)
4 PLN02242 methionine gamma-lyas 100.0 5.5E-61 1.2E-65 482.6 46.8 403 36-443 13-417 (418)
5 PRK08861 cystathionine gamma-s 100.0 1.2E-59 2.5E-64 467.7 42.4 375 41-444 6-386 (388)
6 PRK08249 cystathionine gamma-s 100.0 3.9E-59 8.4E-64 467.2 43.8 384 40-444 8-396 (398)
7 PRK08114 cystathionine beta-ly 100.0 3E-59 6.5E-64 462.7 42.0 378 41-442 6-394 (395)
8 PRK09028 cystathionine beta-ly 100.0 3.4E-59 7.5E-64 463.8 42.3 381 41-445 5-391 (394)
9 PRK06702 O-acetylhomoserine am 100.0 9.7E-59 2.1E-63 464.2 42.4 391 39-445 5-428 (432)
10 PRK08134 O-acetylhomoserine am 100.0 2.5E-58 5.4E-63 464.5 44.3 396 34-445 2-431 (433)
11 PRK08248 O-acetylhomoserine am 100.0 4.5E-58 9.9E-63 462.8 43.3 388 40-443 8-429 (431)
12 TIGR01328 met_gam_lyase methio 100.0 1E-57 2.2E-62 456.7 43.8 383 41-442 4-391 (391)
13 PRK08133 O-succinylhomoserine 100.0 1.3E-57 2.9E-62 456.0 42.9 381 39-440 5-389 (390)
14 PRK05967 cystathionine beta-ly 100.0 1E-57 2.2E-62 452.4 41.2 375 38-443 10-393 (395)
15 KOG0053 Cystathionine beta-lya 100.0 6E-58 1.3E-62 439.9 37.3 383 39-443 20-408 (409)
16 PRK07812 O-acetylhomoserine am 100.0 4.8E-57 1E-61 454.6 44.8 390 39-444 12-434 (436)
17 PRK07504 O-succinylhomoserine 100.0 3.2E-57 6.9E-62 454.1 43.3 386 37-443 7-397 (398)
18 PRK05613 O-acetylhomoserine am 100.0 6.1E-57 1.3E-61 454.0 42.8 391 36-442 9-437 (437)
19 PRK07810 O-succinylhomoserine 100.0 8.8E-57 1.9E-61 450.9 43.0 380 39-439 14-402 (403)
20 PRK08045 cystathionine gamma-s 100.0 6E-57 1.3E-61 449.7 41.5 374 41-443 5-384 (386)
21 PRK05939 hypothetical protein; 100.0 9.1E-57 2E-61 449.6 42.9 371 53-441 5-396 (397)
22 PRK06084 O-acetylhomoserine am 100.0 9.4E-57 2E-61 452.9 42.5 386 42-443 4-424 (425)
23 PRK07049 methionine gamma-lyas 100.0 1.3E-56 2.8E-61 452.6 43.3 391 34-441 11-426 (427)
24 PRK08574 cystathionine gamma-s 100.0 4.1E-56 8.8E-61 443.9 41.7 376 42-442 4-385 (385)
25 PRK07503 methionine gamma-lyas 100.0 9.1E-56 2E-60 444.3 44.1 386 40-444 9-399 (403)
26 TIGR01325 O_suc_HS_sulf O-succ 100.0 3.7E-56 7.9E-61 444.7 41.0 366 53-439 12-380 (380)
27 PRK06234 methionine gamma-lyas 100.0 1.5E-55 3.2E-60 442.6 44.3 388 36-442 4-398 (400)
28 PRK06176 cystathionine gamma-s 100.0 1.3E-55 2.9E-60 439.4 40.7 372 41-442 3-379 (380)
29 TIGR02080 O_succ_thio_ly O-suc 100.0 2.2E-55 4.7E-60 438.2 41.2 371 42-441 5-381 (382)
30 PRK06767 methionine gamma-lyas 100.0 3.4E-55 7.4E-60 438.6 42.7 376 40-442 5-386 (386)
31 PLN02509 cystathionine beta-ly 100.0 2.2E-55 4.8E-60 443.7 40.9 374 38-441 84-461 (464)
32 PRK08776 cystathionine gamma-s 100.0 5.1E-55 1.1E-59 438.0 41.7 374 41-443 13-392 (405)
33 PRK07671 cystathionine beta-ly 100.0 5.3E-55 1.1E-59 435.0 41.4 371 40-440 2-377 (377)
34 cd00614 CGS_like CGS_like: Cys 100.0 9.7E-55 2.1E-59 433.5 41.9 364 56-440 1-369 (369)
35 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 9.7E-55 2.1E-59 439.2 41.7 383 42-440 3-418 (418)
36 PRK05994 O-acetylhomoserine am 100.0 2.3E-54 4.9E-59 436.6 43.5 385 41-441 8-426 (427)
37 PRK06460 hypothetical protein; 100.0 1.3E-54 2.8E-59 432.4 41.0 370 40-442 2-375 (376)
38 TIGR01324 cysta_beta_ly_B cyst 100.0 2.4E-54 5.2E-59 429.3 41.0 360 53-442 12-377 (377)
39 TIGR01329 cysta_beta_ly_E cyst 100.0 4.6E-54 1E-58 428.7 41.1 359 54-442 14-376 (378)
40 PRK07811 cystathionine gamma-s 100.0 5.9E-54 1.3E-58 429.4 41.5 373 38-441 10-388 (388)
41 PRK08064 cystathionine beta-ly 100.0 1.3E-53 2.7E-58 427.3 41.4 377 39-445 5-386 (390)
42 PRK07050 cystathionine beta-ly 100.0 7.2E-53 1.6E-57 421.7 42.3 376 40-442 9-392 (394)
43 PRK06434 cystathionine gamma-l 100.0 6.1E-53 1.3E-57 418.2 39.1 371 41-441 9-384 (384)
44 PRK05968 hypothetical protein; 100.0 3.2E-51 6.8E-56 409.9 42.1 375 42-443 10-388 (389)
45 PRK07269 cystathionine gamma-s 100.0 1.2E-51 2.6E-56 408.4 38.5 354 39-440 5-363 (364)
46 PRK08247 cystathionine gamma-s 100.0 2.5E-49 5.3E-54 393.8 39.5 356 41-442 5-365 (366)
47 PRK07582 cystathionine gamma-l 100.0 1.7E-49 3.7E-54 394.5 38.4 356 43-442 6-366 (366)
48 COG1104 NifS Cysteine sulfinat 100.0 4.8E-49 1E-53 378.1 24.5 342 62-442 6-374 (386)
49 KOG1549 Cysteine desulfurase N 100.0 3E-34 6.5E-39 276.7 22.8 340 63-443 49-416 (428)
50 COG0520 csdA Selenocysteine ly 100.0 3.8E-32 8.3E-37 270.9 28.9 336 64-444 29-404 (405)
51 PRK09295 bifunctional cysteine 100.0 4.3E-32 9.4E-37 274.6 27.8 335 63-444 29-403 (406)
52 COG0436 Aspartate/tyrosine/aro 100.0 2.4E-31 5.1E-36 265.6 31.3 276 98-427 64-375 (393)
53 TIGR03403 nifS_epsilon cystein 100.0 8.6E-32 1.9E-36 270.3 27.4 342 63-443 5-373 (382)
54 PRK02948 cysteine desulfurase; 100.0 9.4E-32 2E-36 269.9 25.0 343 64-443 7-372 (381)
55 PRK10874 cysteine sulfinate de 100.0 4.8E-31 1E-35 266.6 29.6 333 64-444 26-397 (401)
56 TIGR03392 FeS_syn_CsdA cystein 100.0 7.7E-31 1.7E-35 264.8 30.0 333 64-444 23-394 (398)
57 PLN02651 cysteine desulfurase 100.0 3.2E-31 6.8E-36 264.4 23.6 331 64-433 6-364 (364)
58 TIGR03402 FeS_nifS cysteine de 100.0 1.4E-30 2.9E-35 261.4 26.5 341 63-443 5-370 (379)
59 PLN02855 Bifunctional selenocy 100.0 4.5E-30 9.8E-35 261.2 27.4 330 73-443 49-416 (424)
60 TIGR02006 IscS cysteine desulf 100.0 2.8E-30 6.1E-35 260.8 24.6 339 64-443 10-375 (402)
61 TIGR01979 sufS cysteine desulf 100.0 1.3E-29 2.7E-34 256.4 28.2 328 73-444 35-400 (403)
62 PRK07681 aspartate aminotransf 100.0 7.8E-29 1.7E-33 250.2 31.2 244 100-373 70-343 (399)
63 PRK05957 aspartate aminotransf 100.0 1.8E-28 3.8E-33 246.7 32.7 290 97-441 67-385 (389)
64 PRK06207 aspartate aminotransf 100.0 1.6E-28 3.4E-33 248.1 32.0 273 98-425 81-384 (405)
65 cd06453 SufS_like Cysteine des 100.0 3.4E-29 7.4E-34 250.7 26.3 329 65-439 7-373 (373)
66 PRK07324 transaminase; Validat 100.0 1.4E-28 3E-33 246.0 29.9 250 91-372 56-326 (373)
67 PRK06290 aspartate aminotransf 100.0 1.9E-28 4.2E-33 247.4 31.1 286 99-442 81-406 (410)
68 PRK12414 putative aminotransfe 100.0 4.5E-28 9.8E-33 243.3 31.9 219 99-328 70-312 (384)
69 PLN00175 aminotransferase fami 100.0 5.7E-28 1.2E-32 244.4 31.4 243 101-373 93-365 (413)
70 PF00266 Aminotran_5: Aminotra 100.0 6.4E-29 1.4E-33 248.5 24.1 328 64-435 6-371 (371)
71 PLN03026 histidinol-phosphate 100.0 3.7E-28 8E-33 243.4 29.6 283 96-441 83-378 (380)
72 KOG0257 Kynurenine aminotransf 100.0 2.3E-28 5E-33 233.0 24.9 242 89-360 61-344 (420)
73 PRK06108 aspartate aminotransf 100.0 2E-27 4.4E-32 238.6 32.2 244 99-372 65-336 (382)
74 PRK06425 histidinol-phosphate 100.0 6.6E-28 1.4E-32 237.4 28.1 281 93-441 34-329 (332)
75 PRK08960 hypothetical protein; 100.0 2.7E-27 5.9E-32 238.0 32.6 280 100-434 70-377 (387)
76 TIGR03540 DapC_direct LL-diami 100.0 2E-27 4.3E-32 238.8 31.1 283 101-443 69-381 (383)
77 PRK08068 transaminase; Reviewe 100.0 1.3E-27 2.9E-32 240.4 29.8 285 99-444 70-385 (389)
78 PRK07682 hypothetical protein; 100.0 1.5E-27 3.3E-32 239.2 29.8 272 99-425 57-358 (378)
79 PRK09082 methionine aminotrans 100.0 1.1E-27 2.4E-32 240.7 28.4 286 99-443 71-384 (386)
80 PLN02187 rooty/superroot1 100.0 2.8E-27 6E-32 242.1 31.8 217 99-325 108-359 (462)
81 PRK07366 succinyldiaminopimela 100.0 1.7E-27 3.7E-32 239.6 29.3 242 100-372 69-344 (388)
82 COG0079 HisC Histidinol-phosph 100.0 3.2E-27 7E-32 231.9 30.4 288 93-443 51-352 (356)
83 PRK03158 histidinol-phosphate 100.0 8.7E-28 1.9E-32 239.3 26.6 279 97-441 62-357 (359)
84 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.2E-27 2.6E-32 241.5 27.9 331 65-439 25-397 (397)
85 PRK01533 histidinol-phosphate 100.0 1E-27 2.2E-32 238.8 27.0 276 97-441 62-355 (366)
86 PRK07179 hypothetical protein; 100.0 1.2E-26 2.7E-31 234.8 34.9 312 74-447 75-400 (407)
87 PRK14807 histidinol-phosphate 100.0 5.9E-27 1.3E-31 232.5 31.9 243 96-374 56-311 (351)
88 TIGR01822 2am3keto_CoA 2-amino 100.0 1.2E-26 2.5E-31 234.0 34.5 316 73-447 58-391 (393)
89 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 6.5E-27 1.4E-31 235.1 32.4 257 61-328 25-305 (387)
90 PRK04781 histidinol-phosphate 100.0 6.2E-27 1.3E-31 233.3 31.4 287 93-443 53-361 (364)
91 TIGR03537 DapC succinyldiamino 100.0 7.9E-27 1.7E-31 231.5 32.0 244 101-374 38-310 (350)
92 PRK15481 transcriptional regul 100.0 6.6E-27 1.4E-31 238.5 32.1 249 102-387 124-395 (431)
93 PRK14012 cysteine desulfurase; 100.0 8.4E-28 1.8E-32 243.1 24.9 339 64-443 10-377 (404)
94 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 9.1E-27 2E-31 232.6 32.0 263 56-328 7-292 (370)
95 TIGR03235 DNA_S_dndA cysteine 100.0 1E-27 2.2E-32 238.2 25.0 320 64-422 5-353 (353)
96 PRK08912 hypothetical protein; 100.0 5.1E-27 1.1E-31 236.1 29.8 242 101-372 65-338 (387)
97 PRK02731 histidinol-phosphate 100.0 3.6E-27 7.9E-32 235.5 28.1 279 100-442 68-363 (367)
98 PRK05942 aspartate aminotransf 100.0 1.2E-26 2.5E-31 234.0 31.8 283 101-444 75-388 (394)
99 TIGR01264 tyr_amTase_E tyrosin 100.0 8.8E-27 1.9E-31 235.4 30.7 231 99-360 73-338 (401)
100 PRK07777 aminotransferase; Val 100.0 1.6E-26 3.4E-31 232.5 32.1 254 101-387 63-349 (387)
101 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.6E-26 3.5E-31 230.3 31.8 245 73-328 18-286 (361)
102 PRK09276 LL-diaminopimelate am 100.0 1.3E-26 2.8E-31 233.0 31.0 242 101-372 71-342 (385)
103 PTZ00433 tyrosine aminotransfe 100.0 7.5E-27 1.6E-31 236.6 29.3 267 101-425 77-390 (412)
104 PRK07683 aminotransferase A; V 100.0 3.1E-26 6.6E-31 230.3 33.4 219 99-328 65-311 (387)
105 PRK08361 aspartate aminotransf 100.0 9.6E-27 2.1E-31 234.4 29.5 244 99-372 70-344 (391)
106 PRK09105 putative aminotransfe 100.0 7E-27 1.5E-31 233.2 28.3 277 98-443 77-368 (370)
107 PRK09147 succinyldiaminopimela 100.0 1.6E-26 3.4E-31 233.2 30.9 238 102-372 68-344 (396)
108 PRK08153 histidinol-phosphate 100.0 1.3E-26 2.9E-31 231.4 29.8 284 100-442 68-366 (369)
109 PRK05764 aspartate aminotransf 100.0 2.1E-26 4.6E-31 232.1 31.6 217 100-327 69-316 (393)
110 PRK07309 aromatic amino acid a 100.0 3.3E-26 7.2E-31 230.3 32.8 231 101-360 69-328 (391)
111 PRK01688 histidinol-phosphate 100.0 4.3E-27 9.4E-32 233.3 25.9 281 93-439 51-350 (351)
112 PRK06225 aspartate aminotransf 100.0 2.7E-26 5.8E-31 230.3 31.9 288 100-443 67-378 (380)
113 COG1167 ARO8 Transcriptional r 100.0 2.6E-26 5.5E-31 234.3 31.7 275 114-442 155-453 (459)
114 PRK02610 histidinol-phosphate 100.0 1.5E-26 3.2E-31 231.5 29.5 244 99-374 66-336 (374)
115 PRK04870 histidinol-phosphate 100.0 8.4E-27 1.8E-31 231.9 27.4 278 99-441 63-354 (356)
116 PRK05387 histidinol-phosphate 100.0 8.6E-27 1.9E-31 231.6 27.4 242 98-374 59-313 (353)
117 PLN00143 tyrosine/nicotianamin 100.0 2.1E-26 4.6E-31 232.9 30.7 231 101-360 76-343 (409)
118 PRK13355 bifunctional HTH-doma 100.0 2.6E-26 5.6E-31 238.8 31.7 217 100-328 186-439 (517)
119 PLN00145 tyrosine/nicotianamin 100.0 3.8E-26 8.3E-31 232.1 32.2 213 100-324 95-344 (430)
120 PLN02656 tyrosine transaminase 100.0 2.9E-26 6.3E-31 232.0 30.7 213 100-324 74-323 (409)
121 TIGR01977 am_tr_V_EF2568 cyste 100.0 1E-26 2.2E-31 233.0 27.1 328 74-441 18-375 (376)
122 PRK06348 aspartate aminotransf 100.0 4.5E-26 9.7E-31 228.9 31.5 282 101-442 68-379 (384)
123 PTZ00377 alanine aminotransfer 100.0 4E-26 8.7E-31 235.4 31.9 290 100-445 116-479 (481)
124 TIGR01141 hisC histidinol-phos 100.0 1.8E-26 3.9E-31 228.7 28.2 277 98-439 53-345 (346)
125 PRK07337 aminotransferase; Val 100.0 8E-26 1.7E-30 227.5 33.0 284 100-443 68-384 (388)
126 PRK09148 aminotransferase; Val 100.0 7.8E-26 1.7E-30 228.6 32.9 232 101-361 70-330 (405)
127 PRK03317 histidinol-phosphate 100.0 1.6E-26 3.5E-31 230.9 27.5 219 98-328 64-303 (368)
128 PRK05664 threonine-phosphate d 100.0 4.7E-26 1E-30 224.0 30.3 269 102-445 52-328 (330)
129 COG1168 MalY Bifunctional PLP- 100.0 1.2E-25 2.5E-30 212.6 30.9 296 89-442 54-387 (388)
130 PRK06107 aspartate aminotransf 100.0 6.1E-26 1.3E-30 229.3 31.2 214 99-323 74-314 (402)
131 TIGR03538 DapC_gpp succinyldia 100.0 5.9E-26 1.3E-30 228.8 31.0 252 101-388 66-356 (393)
132 PRK05166 histidinol-phosphate 100.0 4.5E-26 9.7E-31 227.9 29.5 275 102-442 74-368 (371)
133 TIGR01265 tyr_nico_aTase tyros 100.0 8.8E-26 1.9E-30 228.2 31.7 270 98-426 72-384 (403)
134 PRK00950 histidinol-phosphate 100.0 2E-26 4.2E-31 229.7 25.7 278 99-442 69-359 (361)
135 PRK08636 aspartate aminotransf 100.0 3.1E-25 6.8E-30 224.2 34.4 242 101-371 73-353 (403)
136 PRK09265 aminotransferase AlaT 100.0 2E-25 4.4E-30 225.7 32.8 283 101-440 74-400 (404)
137 PRK07568 aspartate aminotransf 100.0 1.2E-25 2.7E-30 226.8 31.0 241 100-372 67-338 (397)
138 PLN02450 1-aminocyclopropane-1 100.0 1.9E-25 4E-30 229.0 32.6 287 101-442 88-431 (468)
139 TIGR00858 bioF 8-amino-7-oxono 100.0 3.5E-25 7.6E-30 220.3 33.7 308 74-439 37-359 (360)
140 PRK04635 histidinol-phosphate 100.0 6.8E-26 1.5E-30 225.1 28.2 278 94-440 55-350 (354)
141 PRK08056 threonine-phosphate d 100.0 9.3E-26 2E-30 224.3 28.9 278 99-442 55-352 (356)
142 cd06454 KBL_like KBL_like; thi 100.0 3.8E-25 8.2E-30 219.3 33.1 310 74-442 22-348 (349)
143 PRK06358 threonine-phosphate d 99.9 1.3E-25 2.7E-30 223.1 29.3 277 97-437 52-351 (354)
144 PRK08363 alanine aminotransfer 99.9 2.1E-25 4.5E-30 225.2 31.2 216 99-324 70-316 (398)
145 PRK07550 hypothetical protein; 99.9 3.2E-25 6.9E-30 223.0 32.1 284 101-441 69-383 (386)
146 PRK03321 putative aminotransfe 99.9 5.1E-26 1.1E-30 225.9 25.9 276 98-439 56-349 (352)
147 PRK06836 aspartate aminotransf 99.9 4.1E-25 9E-30 222.6 32.3 242 99-374 73-350 (394)
148 TIGR01140 L_thr_O3P_dcar L-thr 99.9 2.5E-25 5.3E-30 218.9 29.6 277 93-439 41-329 (330)
149 PLN02607 1-aminocyclopropane-1 99.9 4.7E-25 1E-29 224.4 32.5 287 100-441 96-437 (447)
150 PLN02376 1-aminocyclopropane-1 99.9 4.1E-25 8.9E-30 227.4 32.0 285 101-440 96-437 (496)
151 PRK08175 aminotransferase; Val 99.9 4E-25 8.6E-30 222.9 31.3 243 101-372 69-343 (395)
152 PRK14809 histidinol-phosphate 99.9 1.7E-25 3.7E-30 222.6 27.4 244 99-386 65-325 (357)
153 PRK06959 putative threonine-ph 99.9 3E-25 6.5E-30 218.9 28.4 274 95-443 50-335 (339)
154 PRK05958 8-amino-7-oxononanoat 99.9 2.6E-24 5.6E-29 216.2 35.4 311 74-442 60-384 (385)
155 PRK07908 hypothetical protein; 99.9 2.5E-24 5.5E-29 213.5 34.4 272 100-439 59-345 (349)
156 PRK07590 L,L-diaminopimelate a 99.9 2.2E-25 4.7E-30 225.8 27.3 251 91-372 70-365 (409)
157 PRK14808 histidinol-phosphate 99.9 7.1E-25 1.5E-29 215.9 29.8 239 96-374 53-302 (335)
158 PRK06855 aminotransferase; Val 99.9 1.4E-24 3E-29 221.1 32.3 231 101-361 75-345 (433)
159 cd06451 AGAT_like Alanine-glyo 99.9 4.4E-25 9.6E-30 219.5 27.6 291 98-442 31-354 (356)
160 PRK03967 histidinol-phosphate 99.9 6.7E-25 1.5E-29 216.4 27.8 212 95-323 51-274 (337)
161 PRK05839 hypothetical protein; 99.9 1.1E-24 2.5E-29 217.9 29.2 264 100-425 65-356 (374)
162 PRK07392 threonine-phosphate d 99.9 1.5E-24 3.2E-29 216.1 29.5 274 99-436 57-354 (360)
163 PRK07865 N-succinyldiaminopime 99.9 1.9E-24 4E-29 215.7 29.8 236 102-374 65-325 (364)
164 PLN02231 alanine transaminase 99.9 3.5E-24 7.5E-29 221.8 32.6 299 90-445 161-531 (534)
165 PLN02724 Molybdenum cofactor s 99.9 8.1E-25 1.8E-29 237.4 28.9 352 64-442 41-485 (805)
166 PRK13392 5-aminolevulinate syn 99.9 7E-24 1.5E-28 214.9 33.0 293 99-447 91-399 (410)
167 TIGR03539 DapC_actino succinyl 99.9 3.4E-24 7.3E-29 213.2 29.6 223 115-374 81-319 (357)
168 PLN02483 serine palmitoyltrans 99.9 1.8E-23 3.9E-28 215.0 35.2 291 97-444 144-465 (489)
169 TIGR03542 DAPAT_plant LL-diami 99.9 4.7E-24 1E-28 215.5 30.0 245 98-373 74-359 (402)
170 PF00155 Aminotran_1_2: Aminot 99.9 2E-24 4.2E-29 215.4 26.3 249 91-374 38-326 (363)
171 TIGR01821 5aminolev_synth 5-am 99.9 2.7E-23 5.8E-28 210.1 34.1 293 97-445 88-396 (402)
172 PRK13520 L-tyrosine decarboxyl 99.9 7.8E-24 1.7E-28 211.7 29.6 313 64-443 27-369 (371)
173 TIGR01825 gly_Cac_T_rel pyrido 99.9 3E-23 6.4E-28 208.6 33.6 295 91-442 70-378 (385)
174 KOG0259 Tyrosine aminotransfer 99.9 2.3E-23 5E-28 195.6 29.8 215 98-325 102-354 (447)
175 PRK06939 2-amino-3-ketobutyrat 99.9 4.8E-23 1E-27 207.9 33.8 290 97-444 85-392 (397)
176 PLN03227 serine palmitoyltrans 99.9 4.8E-23 1E-27 206.8 33.6 300 93-442 39-379 (392)
177 PRK13393 5-aminolevulinate syn 99.9 7.1E-23 1.5E-27 207.2 34.0 291 98-444 89-395 (406)
178 PRK09440 avtA valine--pyruvate 99.9 2.2E-23 4.8E-28 211.7 29.8 296 101-443 76-413 (416)
179 PLN02721 threonine aldolase 99.9 1.6E-23 3.5E-28 208.0 28.2 282 98-442 39-349 (353)
180 TIGR02326 transamin_PhnW 2-ami 99.9 3.2E-23 6.9E-28 206.8 29.7 289 97-442 33-359 (363)
181 PTZ00376 aspartate aminotransf 99.9 3.2E-23 6.9E-28 209.6 29.7 222 91-324 66-338 (404)
182 PRK08354 putative aminotransfe 99.9 3.7E-23 8.1E-28 201.8 28.9 159 101-276 42-205 (311)
183 PLN02409 serine--glyoxylate am 99.9 2.3E-23 5E-28 210.1 28.3 297 94-441 37-368 (401)
184 PRK09064 5-aminolevulinate syn 99.9 1.4E-22 3.1E-27 205.2 34.0 293 97-445 89-397 (407)
185 PLN02368 alanine transaminase 99.9 2.1E-23 4.6E-28 209.7 27.7 217 102-330 110-385 (407)
186 PRK13479 2-aminoethylphosphona 99.9 5.4E-23 1.2E-27 205.5 30.4 291 99-444 37-362 (368)
187 PRK09275 aspartate aminotransf 99.9 1.7E-23 3.7E-28 214.1 27.0 144 116-267 163-328 (527)
188 cd06502 TA_like Low-specificit 99.9 4.7E-23 1E-27 203.4 29.1 285 97-441 30-337 (338)
189 cd00609 AAT_like Aspartate ami 99.9 2.5E-22 5.4E-27 198.5 33.7 288 96-440 33-349 (350)
190 TIGR01814 kynureninase kynuren 99.9 1.9E-23 4.1E-28 211.4 26.1 318 64-442 34-404 (406)
191 PRK08637 hypothetical protein; 99.9 1.4E-22 3.1E-27 203.7 32.3 255 89-373 36-346 (388)
192 PRK09257 aromatic amino acid a 99.9 3.6E-23 7.9E-28 208.7 27.7 215 100-324 70-333 (396)
193 TIGR03812 tyr_de_CO2_Arch tyro 99.9 8.2E-23 1.8E-27 204.5 29.7 309 66-442 29-373 (373)
194 TIGR01437 selA_rel uncharacter 99.9 5.4E-23 1.2E-27 204.5 26.5 296 97-442 43-362 (363)
195 PTZ00094 serine hydroxymethylt 99.9 4.9E-23 1.1E-27 210.7 26.9 335 60-444 37-407 (452)
196 PLN02672 methionine S-methyltr 99.9 1.1E-22 2.4E-27 220.1 30.8 218 100-330 735-996 (1082)
197 TIGR03801 asp_4_decarbox aspar 99.9 1.1E-22 2.4E-27 207.8 29.0 144 116-267 157-327 (521)
198 PLN03032 serine decarboxylase; 99.9 6.1E-23 1.3E-27 202.6 26.2 244 71-327 38-318 (374)
199 PRK05937 8-amino-7-oxononanoat 99.9 3.8E-22 8.3E-27 199.3 31.1 307 65-444 19-349 (370)
200 cd00616 AHBA_syn 3-amino-5-hyd 99.9 8E-22 1.7E-26 195.7 32.3 304 97-440 16-352 (352)
201 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.3E-22 7.1E-27 198.6 29.3 288 99-442 31-354 (355)
202 PLN02822 serine palmitoyltrans 99.9 1.2E-21 2.7E-26 201.1 33.9 291 97-442 152-474 (481)
203 cd00613 GDC-P Glycine cleavage 99.9 3.2E-22 7E-27 202.0 29.2 288 98-439 63-398 (398)
204 TIGR01788 Glu-decarb-GAD gluta 99.9 5E-22 1.1E-26 200.1 29.0 275 66-374 50-383 (431)
205 cd00378 SHMT Serine-glycine hy 99.9 3E-22 6.6E-27 202.5 26.7 330 61-442 23-382 (402)
206 PRK02769 histidine decarboxyla 99.9 4.4E-22 9.4E-27 197.9 26.8 245 71-328 37-316 (380)
207 PLN02397 aspartate transaminas 99.9 1.5E-21 3.3E-26 198.1 30.4 224 91-324 85-356 (423)
208 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.2E-21 4.7E-26 191.3 29.3 206 98-322 53-272 (346)
209 PRK10534 L-threonine aldolase; 99.9 1.8E-21 3.9E-26 191.9 28.1 242 97-374 32-296 (333)
210 PRK00854 rocD ornithine--oxo-a 99.9 3.1E-21 6.6E-26 195.1 28.8 287 97-442 81-398 (401)
211 PRK00011 glyA serine hydroxyme 99.9 2.6E-21 5.6E-26 196.5 28.2 283 63-374 31-336 (416)
212 PRK13238 tnaA tryptophanase/L- 99.9 3.2E-21 6.9E-26 196.4 28.7 225 91-331 72-343 (460)
213 PRK03244 argD acetylornithine 99.9 2.3E-21 4.9E-26 195.8 27.0 288 95-442 81-391 (398)
214 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.7E-20 3.7E-25 187.8 33.1 306 98-442 32-376 (379)
215 cd06450 DOPA_deC_like DOPA dec 99.9 7.8E-22 1.7E-26 195.3 23.1 281 80-441 19-344 (345)
216 TIGR00474 selA seryl-tRNA(sec) 99.9 9E-22 1.9E-26 198.9 21.8 245 65-323 89-371 (454)
217 COG0156 BioF 7-keto-8-aminopel 99.9 3.3E-20 7.2E-25 182.1 31.9 287 97-442 82-387 (388)
218 TIGR02379 ECA_wecE TDP-4-keto- 99.9 4.1E-20 8.9E-25 184.4 33.1 309 98-442 30-374 (376)
219 PRK04073 rocD ornithine--oxo-a 99.9 5.3E-21 1.2E-25 192.8 26.8 286 97-442 80-394 (396)
220 TIGR00707 argD acetylornithine 99.9 9.4E-21 2E-25 190.0 27.2 286 96-441 66-377 (379)
221 cd00610 OAT_like Acetyl ornith 99.9 5.1E-21 1.1E-25 194.2 25.3 289 97-441 77-411 (413)
222 TIGR03588 PseC UDP-4-keto-6-de 99.9 2.8E-20 6E-25 186.7 30.0 306 98-442 28-379 (380)
223 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.2E-19 2.7E-24 181.5 33.8 309 98-442 30-373 (375)
224 KOG1368 Threonine aldolase [Am 99.9 4.6E-21 1E-25 174.6 21.0 311 62-440 25-363 (384)
225 PLN02955 8-amino-7-oxononanoat 99.9 9.6E-20 2.1E-24 182.9 32.3 286 99-444 147-460 (476)
226 PRK13034 serine hydroxymethylt 99.9 5.6E-20 1.2E-24 186.0 29.3 253 61-329 32-311 (416)
227 PRK04311 selenocysteine syntha 99.9 8.8E-21 1.9E-25 192.3 23.1 240 73-324 103-377 (464)
228 KOG0256 1-aminocyclopropane-1- 99.9 6.6E-20 1.4E-24 174.0 27.2 267 101-425 123-442 (471)
229 cd00617 Tnase_like Tryptophana 99.9 4.7E-20 1E-24 185.5 27.7 221 97-331 51-318 (431)
230 PRK02627 acetylornithine amino 99.9 1.3E-20 2.9E-25 190.1 23.7 252 96-374 78-355 (396)
231 PRK00451 glycine dehydrogenase 99.9 4.1E-20 8.8E-25 189.5 27.3 291 99-442 112-445 (447)
232 COG4992 ArgD Ornithine/acetylo 99.9 1.1E-20 2.4E-25 182.1 21.2 290 95-443 80-400 (404)
233 PRK01278 argD acetylornithine 99.9 2.1E-20 4.5E-25 188.2 24.1 252 97-374 71-349 (389)
234 COG0399 WecE Predicted pyridox 99.9 5.7E-19 1.2E-23 172.1 28.8 322 73-443 18-371 (374)
235 PRK05093 argD bifunctional N-s 99.9 1.4E-19 3E-24 183.0 25.1 286 97-442 80-397 (403)
236 TIGR03246 arg_catab_astC succi 99.9 2.6E-19 5.6E-24 180.4 27.0 253 97-374 75-356 (397)
237 COG2008 GLY1 Threonine aldolas 99.9 5.4E-19 1.2E-23 167.2 27.2 311 62-443 3-341 (342)
238 PTZ00125 ornithine aminotransf 99.8 3.6E-19 7.8E-24 179.9 25.7 254 98-374 72-356 (400)
239 PRK07505 hypothetical protein; 99.8 4.5E-18 9.8E-23 171.9 33.5 192 74-277 67-276 (402)
240 PF01041 DegT_DnrJ_EryC1: DegT 99.8 5.7E-19 1.2E-23 175.9 26.3 307 98-440 24-363 (363)
241 PRK02936 argD acetylornithine 99.8 5.5E-19 1.2E-23 177.1 24.8 286 97-441 69-375 (377)
242 PRK12381 bifunctional succinyl 99.8 7.6E-19 1.7E-23 177.6 25.5 292 96-445 78-403 (406)
243 cd00615 Orn_deC_like Ornithine 99.8 9.8E-20 2.1E-24 176.2 17.7 159 96-265 56-234 (294)
244 PF06838 Met_gamma_lyase: Meth 99.8 1E-18 2.2E-23 165.0 22.9 259 97-374 52-332 (403)
245 PRK04366 glycine dehydrogenase 99.8 1.6E-18 3.4E-23 178.5 26.5 165 98-272 112-297 (481)
246 PRK15407 lipopolysaccharide bi 99.8 6.8E-18 1.5E-22 171.3 30.7 211 98-324 62-329 (438)
247 cd00611 PSAT_like Phosphoserin 99.8 7.6E-19 1.7E-23 174.4 23.1 313 66-443 7-354 (355)
248 KOG0633 Histidinol phosphate a 99.8 2.2E-18 4.7E-23 154.5 21.4 287 98-438 68-374 (375)
249 KOG0634 Aromatic amino acid am 99.8 8.6E-18 1.9E-22 160.9 26.8 277 116-442 126-464 (472)
250 COG0075 Serine-pyruvate aminot 99.8 2.2E-17 4.7E-22 160.9 30.1 226 96-329 35-290 (383)
251 TIGR01885 Orn_aminotrans ornit 99.8 6.8E-18 1.5E-22 170.6 27.1 289 97-442 77-399 (401)
252 PRK05355 3-phosphoserine/phosp 99.8 5.9E-18 1.3E-22 167.9 25.5 292 89-444 35-357 (360)
253 PLN02414 glycine dehydrogenase 99.8 2.6E-18 5.7E-23 186.0 24.7 293 99-444 568-906 (993)
254 PRK03080 phosphoserine aminotr 99.8 8E-18 1.7E-22 168.5 26.5 285 97-444 46-372 (378)
255 TIGR01364 serC_1 phosphoserine 99.8 1.2E-17 2.5E-22 165.0 26.2 307 73-444 8-347 (349)
256 PRK13580 serine hydroxymethylt 99.8 3.3E-17 7.1E-22 164.8 27.9 282 61-374 53-392 (493)
257 cd01494 AAT_I Aspartate aminot 99.8 3.2E-18 6.9E-23 151.0 17.0 153 101-264 2-169 (170)
258 PLN02624 ornithine-delta-amino 99.8 3.6E-17 7.8E-22 168.0 27.0 254 96-374 114-405 (474)
259 PLN00144 acetylornithine trans 99.8 4.8E-17 1E-21 162.9 27.0 252 97-374 55-340 (382)
260 PRK04260 acetylornithine amino 99.8 3.8E-17 8.2E-22 163.7 25.2 278 102-441 69-373 (375)
261 PRK04612 argD acetylornithine 99.8 5.3E-17 1.1E-21 163.6 25.0 257 96-374 79-364 (408)
262 TIGR03531 selenium_SpcS O-phos 99.8 1.7E-16 3.6E-21 159.6 28.3 210 99-323 105-344 (444)
263 TIGR00713 hemL glutamate-1-sem 99.8 6.5E-17 1.4E-21 164.6 24.5 222 97-325 86-342 (423)
264 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.9E-16 4.1E-21 157.2 26.7 220 97-331 69-336 (450)
265 TIGR01366 serC_3 phosphoserine 99.8 4.8E-17 1E-21 161.7 22.5 289 98-443 40-358 (361)
266 PRK03715 argD acetylornithine 99.8 1.1E-16 2.3E-21 161.0 23.9 289 97-442 76-390 (395)
267 PRK09792 4-aminobutyrate trans 99.8 3.9E-16 8.4E-21 158.3 26.9 296 93-442 77-418 (421)
268 COG1103 Archaea-specific pyrid 99.8 1.6E-15 3.5E-20 136.9 27.5 219 96-324 58-299 (382)
269 PRK08117 4-aminobutyrate amino 99.8 4.2E-16 9.1E-21 158.9 27.2 255 96-374 83-388 (433)
270 PF01212 Beta_elim_lyase: Beta 99.7 4.5E-18 9.8E-23 162.7 10.9 225 92-330 24-277 (290)
271 PRK08088 4-aminobutyrate amino 99.7 2E-15 4.4E-20 153.5 29.5 196 96-297 81-313 (425)
272 PRK08360 4-aminobutyrate amino 99.7 1.2E-15 2.6E-20 155.2 27.7 240 97-360 82-365 (443)
273 TIGR03372 putres_am_tran putre 99.7 7.9E-16 1.7E-20 155.9 26.0 294 96-441 114-440 (442)
274 PRK05964 adenosylmethionine--8 99.7 1.4E-15 2.9E-20 154.7 27.5 292 96-443 82-420 (423)
275 TIGR00700 GABAtrnsam 4-aminobu 99.7 2.5E-15 5.4E-20 152.5 29.1 192 95-294 72-308 (420)
276 PRK11522 putrescine--2-oxoglut 99.7 7.6E-16 1.7E-20 157.1 24.9 258 96-374 121-410 (459)
277 TIGR02407 ectoine_ectB diamino 99.7 1.5E-15 3.3E-20 153.5 26.4 293 97-442 76-409 (412)
278 PRK06777 4-aminobutyrate amino 99.7 1.2E-15 2.5E-20 154.8 25.5 242 95-360 79-359 (421)
279 PLN02271 serine hydroxymethylt 99.7 5.6E-15 1.2E-19 149.4 29.9 282 61-374 152-491 (586)
280 PLN03226 serine hydroxymethylt 99.7 2E-15 4.2E-20 154.4 27.2 259 61-331 38-341 (475)
281 COG0160 GabT 4-aminobutyrate a 99.7 2E-15 4.3E-20 150.1 25.2 251 99-374 99-404 (447)
282 PRK09264 diaminobutyrate--2-ox 99.7 3.5E-15 7.6E-20 151.6 27.2 299 97-447 80-422 (425)
283 KOG1360 5-aminolevulinate synt 99.7 6.4E-15 1.4E-19 139.5 25.0 325 61-442 174-521 (570)
284 PLN02760 4-aminobutyrate:pyruv 99.7 4.4E-15 9.6E-20 152.9 25.3 241 97-360 131-428 (504)
285 COG4100 Cystathionine beta-lya 99.7 4E-15 8.6E-20 136.2 22.0 266 87-374 56-343 (416)
286 PRK13237 tyrosine phenol-lyase 99.7 1.6E-14 3.4E-19 144.0 28.0 223 92-331 73-343 (460)
287 PRK08593 4-aminobutyrate amino 99.7 1E-14 2.2E-19 148.6 27.2 255 96-374 82-390 (445)
288 PLN02880 tyrosine decarboxylas 99.7 9.2E-15 2E-19 150.2 26.9 244 76-330 99-407 (490)
289 PRK06058 4-aminobutyrate amino 99.7 9.4E-15 2E-19 149.1 26.8 255 96-374 96-401 (443)
290 PRK07495 4-aminobutyrate amino 99.7 5.5E-15 1.2E-19 149.8 24.8 298 95-443 79-423 (425)
291 PLN02263 serine decarboxylase 99.7 2.2E-14 4.7E-19 144.2 28.3 235 83-327 114-385 (470)
292 PRK05769 4-aminobutyrate amino 99.7 1.2E-14 2.5E-19 148.1 26.4 287 96-442 94-436 (441)
293 COG0001 HemL Glutamate-1-semia 99.7 1.2E-14 2.7E-19 141.9 25.3 243 91-360 86-364 (432)
294 PRK04013 argD acetylornithine/ 99.7 6.4E-15 1.4E-19 145.9 23.8 164 95-268 62-247 (364)
295 TIGR00461 gcvP glycine dehydro 99.7 1.1E-14 2.4E-19 156.3 27.1 220 98-330 529-791 (939)
296 PRK06105 aminotransferase; Pro 99.7 6.8E-15 1.5E-19 150.5 24.5 245 93-360 86-386 (460)
297 PRK00062 glutamate-1-semialdeh 99.7 3.1E-15 6.7E-20 152.1 21.4 237 97-360 88-360 (426)
298 PRK05367 glycine dehydrogenase 99.7 6.3E-15 1.4E-19 160.7 24.6 293 99-444 542-874 (954)
299 KOG1359 Glycine C-acetyltransf 99.7 4.2E-15 9.1E-20 135.6 19.4 310 74-444 88-411 (417)
300 COG0112 GlyA Glycine/serine hy 99.7 3E-14 6.5E-19 136.0 26.0 282 61-374 30-340 (413)
301 PRK06918 4-aminobutyrate amino 99.7 1.8E-14 3.8E-19 147.6 26.2 216 96-322 94-357 (451)
302 PRK05367 glycine dehydrogenase 99.7 1.5E-14 3.2E-19 157.8 26.5 275 99-440 121-437 (954)
303 PRK05965 hypothetical protein; 99.7 2.4E-14 5.1E-19 146.5 26.3 299 96-448 87-454 (459)
304 COG3977 Alanine-alpha-ketoisov 99.7 1.6E-14 3.4E-19 132.3 22.0 297 98-442 77-412 (417)
305 COG0076 GadB Glutamate decarbo 99.7 1.5E-14 3.2E-19 146.5 23.8 265 62-361 67-381 (460)
306 PRK12403 putative aminotransfe 99.7 2.3E-14 4.9E-19 146.7 25.5 242 97-360 96-389 (460)
307 PRK06541 hypothetical protein; 99.7 3.5E-14 7.6E-19 145.2 25.9 239 96-360 92-386 (460)
308 PRK06082 4-aminobutyrate amino 99.7 2.8E-14 6.2E-19 145.8 25.2 297 95-445 109-455 (459)
309 PRK07678 aminotransferase; Val 99.7 4E-14 8.6E-19 144.6 26.1 255 96-374 86-404 (451)
310 PLN02414 glycine dehydrogenase 99.7 3.1E-14 6.7E-19 154.7 26.6 276 99-442 148-466 (993)
311 PLN02590 probable tyrosine dec 99.7 1.5E-13 3.3E-18 141.5 30.4 219 102-330 173-455 (539)
312 PRK07481 hypothetical protein; 99.7 1E-13 2.2E-18 141.6 28.4 241 96-360 83-382 (449)
313 PRK06062 hypothetical protein; 99.7 4.2E-14 9.1E-19 144.3 25.3 244 95-360 91-379 (451)
314 PRK09221 beta alanine--pyruvat 99.6 4.6E-14 1E-18 143.8 25.2 289 96-442 89-440 (445)
315 PRK07482 hypothetical protein; 99.6 2.2E-14 4.9E-19 146.7 22.9 242 95-360 90-389 (461)
316 PRK13360 omega amino acid--pyr 99.6 5.6E-14 1.2E-18 143.1 25.6 219 96-323 86-362 (442)
317 PRK07046 aminotransferase; Val 99.6 4.6E-14 1E-18 143.9 24.9 170 97-273 113-307 (453)
318 PRK07986 adenosylmethionine--8 99.6 6.7E-14 1.5E-18 141.7 24.9 291 96-443 83-421 (428)
319 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 3.1E-15 6.7E-20 148.1 14.5 213 97-321 64-315 (417)
320 TIGR03799 NOD_PanD_pyr putativ 99.6 2E-13 4.3E-18 140.8 28.3 204 117-330 162-427 (522)
321 PRK12566 glycine dehydrogenase 99.6 6.4E-14 1.4E-18 149.5 25.3 150 96-254 540-709 (954)
322 TIGR00709 dat 2,4-diaminobutyr 99.6 7.5E-14 1.6E-18 142.4 24.9 240 96-360 79-366 (442)
323 PRK12389 glutamate-1-semialdeh 99.6 9E-14 1.9E-18 141.3 25.2 219 96-322 90-340 (428)
324 PRK06943 adenosylmethionine--8 99.6 1.7E-13 3.6E-18 139.9 26.6 239 96-360 94-389 (453)
325 PRK05639 4-aminobutyrate amino 99.6 2.9E-13 6.2E-18 138.2 28.2 290 98-442 95-444 (457)
326 PF00464 SHMT: Serine hydroxym 99.6 4.6E-14 1E-18 139.2 21.4 243 104-374 71-356 (399)
327 PLN02482 glutamate-1-semialdeh 99.6 7.5E-14 1.6E-18 142.7 23.4 219 97-323 137-387 (474)
328 KOG2862 Alanine-glyoxylate ami 99.6 2.8E-13 6E-18 124.9 24.2 220 99-326 50-304 (385)
329 PRK05630 adenosylmethionine--8 99.6 2.2E-13 4.9E-18 137.8 26.0 290 96-442 80-417 (422)
330 PRK06173 adenosylmethionine--8 99.6 9.7E-14 2.1E-18 140.7 23.1 256 96-374 84-387 (429)
331 PRK07036 hypothetical protein; 99.6 1.1E-13 2.4E-18 141.8 23.6 241 96-360 92-389 (466)
332 PRK08742 adenosylmethionine--8 99.6 4.7E-13 1E-17 137.0 26.8 172 96-273 104-329 (472)
333 PRK07483 hypothetical protein; 99.6 4.4E-13 9.6E-18 136.5 25.6 240 96-360 70-366 (443)
334 TIGR03251 LAT_fam L-lysine 6-t 99.6 2.5E-13 5.3E-18 138.2 23.6 289 96-441 82-430 (431)
335 PRK06916 adenosylmethionine--8 99.6 1.7E-13 3.6E-18 140.3 22.5 241 97-360 97-392 (460)
336 KOG1402 Ornithine aminotransfe 99.6 3.6E-13 7.7E-18 125.0 22.0 240 98-360 100-370 (427)
337 PRK07480 putative aminotransfe 99.6 5.4E-13 1.2E-17 136.3 25.2 242 96-360 91-385 (456)
338 PRK06148 hypothetical protein; 99.6 4.8E-13 1E-17 148.6 26.4 257 95-374 659-969 (1013)
339 TIGR00508 bioA adenosylmethion 99.6 7E-13 1.5E-17 134.6 25.5 291 96-443 85-424 (427)
340 PRK06917 hypothetical protein; 99.6 7E-13 1.5E-17 135.2 25.5 305 96-447 71-443 (447)
341 COG0161 BioA Adenosylmethionin 99.6 4.6E-13 9.9E-18 132.5 22.9 296 93-444 82-446 (449)
342 PRK06938 diaminobutyrate--2-ox 99.6 9.4E-13 2E-17 134.8 26.0 240 96-360 103-391 (464)
343 PRK06149 hypothetical protein; 99.6 8.1E-13 1.8E-17 146.6 27.0 257 95-374 620-929 (972)
344 PRK07030 adenosylmethionine--8 99.6 1.3E-12 2.7E-17 133.9 26.3 241 96-360 87-383 (466)
345 PRK00615 glutamate-1-semialdeh 99.5 5.6E-13 1.2E-17 135.1 21.5 171 96-273 90-291 (433)
346 PRK15029 arginine decarboxylas 99.5 4E-13 8.8E-18 142.3 20.5 155 97-262 203-397 (755)
347 KOG1404 Alanine-glyoxylate ami 99.5 9.1E-13 2E-17 125.2 20.2 247 91-360 84-374 (442)
348 PRK06931 diaminobutyrate--2-ox 99.5 2.8E-12 6.1E-17 131.1 24.4 240 96-360 98-385 (459)
349 TIGR02617 tnaA_trp_ase tryptop 99.5 4.3E-12 9.4E-17 125.1 24.1 247 62-330 45-351 (467)
350 PRK13578 ornithine decarboxyla 99.5 5E-12 1.1E-16 132.9 25.6 153 98-262 173-366 (720)
351 COG1448 TyrB Aspartate/tyrosin 99.5 1.8E-11 3.8E-16 116.9 26.6 249 101-374 71-367 (396)
352 PRK08297 L-lysine aminotransfe 99.5 1.2E-11 2.5E-16 126.2 27.1 253 96-374 89-402 (443)
353 PF00282 Pyridoxal_deC: Pyrido 99.5 8.1E-13 1.8E-17 131.4 17.3 222 97-328 73-360 (373)
354 PF00202 Aminotran_3: Aminotra 99.5 3.1E-13 6.6E-18 133.2 13.7 238 94-360 54-338 (339)
355 PLN02974 adenosylmethionine-8- 99.5 2.3E-11 5E-16 130.9 28.6 197 95-297 405-706 (817)
356 KOG1401 Acetylornithine aminot 99.5 8.3E-12 1.8E-16 119.6 22.3 223 91-322 90-347 (433)
357 KOG1357 Serine palmitoyltransf 99.5 4E-13 8.6E-18 129.6 12.8 217 98-328 181-429 (519)
358 TIGR01365 serC_2 phosphoserine 99.5 1.4E-11 3.1E-16 122.0 24.1 287 94-442 34-370 (374)
359 PLN02452 phosphoserine transam 99.5 9.6E-12 2.1E-16 123.1 22.4 282 98-444 51-362 (365)
360 TIGR00699 GABAtrns_euk 4-amino 99.5 6.3E-12 1.4E-16 127.9 20.5 287 96-442 98-463 (464)
361 COG3844 Kynureninase [Amino ac 99.4 2.4E-11 5.2E-16 113.0 21.9 284 101-442 78-403 (407)
362 KOG0258 Alanine aminotransfera 99.4 3.2E-11 7E-16 114.5 22.1 203 60-274 79-324 (475)
363 PRK06209 glutamate-1-semialdeh 99.4 2.3E-11 5E-16 123.8 20.9 165 100-271 89-271 (431)
364 TIGR00461 gcvP glycine dehydro 99.4 2.2E-10 4.8E-15 123.5 25.6 276 99-440 109-426 (939)
365 PRK12462 phosphoserine aminotr 99.3 5.3E-10 1.2E-14 109.8 25.7 283 98-444 48-361 (364)
366 PRK15400 lysine decarboxylase 99.3 7E-10 1.5E-14 116.8 27.2 145 98-253 194-371 (714)
367 PRK15399 lysine decarboxylase 99.3 1E-09 2.3E-14 115.4 27.8 151 98-262 194-378 (713)
368 PF12897 Aminotran_MocR: Alani 99.3 8.3E-10 1.8E-14 105.8 24.0 282 98-434 68-405 (425)
369 COG0403 GcvP Glycine cleavage 99.3 1.6E-09 3.5E-14 104.8 26.0 282 100-442 121-447 (450)
370 PF02347 GDC-P: Glycine cleava 99.3 9.2E-10 2E-14 109.3 22.3 214 99-323 110-364 (429)
371 PF03841 SelA: L-seryl-tRNA se 99.2 1.1E-11 2.3E-16 119.2 6.5 164 102-275 50-236 (367)
372 COG1921 SelA Selenocysteine sy 99.2 9E-10 2E-14 106.9 19.3 160 102-275 71-246 (395)
373 KOG1358 Serine palmitoyltransf 99.2 6.3E-10 1.4E-14 106.0 17.3 153 101-266 141-317 (467)
374 TIGR03811 tyr_de_CO2_Ent tyros 99.2 4E-09 8.7E-14 110.1 22.7 225 91-324 115-476 (608)
375 COG1982 LdcC Arginine/lysine/o 99.1 4E-09 8.6E-14 106.9 20.0 153 99-262 70-243 (557)
376 KOG1383 Glutamate decarboxylas 99.1 7.1E-09 1.5E-13 101.2 20.6 287 101-447 122-452 (491)
377 KOG1403 Predicted alanine-glyo 99.1 3.2E-09 6.8E-14 97.8 14.5 292 100-444 88-440 (452)
378 PF04864 Alliinase_C: Allinase 99.0 9E-09 2E-13 97.5 16.6 288 99-442 43-362 (363)
379 PRK12566 glycine dehydrogenase 99.0 9.9E-08 2.2E-12 102.8 25.2 213 99-327 124-379 (954)
380 COG1003 GcvP Glycine cleavage 99.0 3.5E-08 7.6E-13 95.6 19.0 216 98-322 108-363 (496)
381 KOG1412 Aspartate aminotransfe 98.9 7.4E-07 1.6E-11 82.9 22.0 231 118-374 103-374 (410)
382 KOG2467 Glycine/serine hydroxy 98.8 3.3E-06 7.1E-11 80.4 24.3 305 36-374 21-377 (477)
383 KOG0628 Aromatic-L-amino-acid/ 98.7 5.6E-06 1.2E-10 81.1 23.2 254 91-374 101-427 (511)
384 KOG0629 Glutamate decarboxylas 98.6 1.9E-06 4.1E-11 83.5 15.7 216 102-325 144-415 (510)
385 PF05889 SLA_LP_auto_ag: Solub 98.6 3.1E-06 6.7E-11 82.6 17.1 152 115-277 75-250 (389)
386 COG3033 TnaA Tryptophanase [Am 98.6 1.7E-05 3.7E-10 75.4 21.1 219 98-331 78-354 (471)
387 COG1932 SerC Phosphoserine ami 98.4 3E-05 6.6E-10 74.4 18.7 285 98-444 49-362 (365)
388 KOG1405 4-aminobutyrate aminot 98.3 3.7E-05 8.1E-10 73.0 16.9 176 178-386 255-450 (484)
389 KOG1411 Aspartate aminotransfe 98.2 3.8E-05 8.2E-10 72.8 14.5 226 126-374 129-394 (427)
390 KOG2040 Glycine dehydrogenase 98.1 0.00022 4.7E-09 72.8 17.3 217 98-323 581-836 (1001)
391 KOG2040 Glycine dehydrogenase 97.9 0.0033 7.3E-08 64.4 22.4 138 103-250 167-309 (1001)
392 PLN02994 1-aminocyclopropane-1 97.1 0.0012 2.6E-08 57.1 6.4 51 100-153 97-153 (153)
393 KOG3843 Predicted serine hydro 97.0 0.01 2.2E-07 54.6 11.7 166 102-277 60-252 (432)
394 KOG3846 L-kynurenine hydrolase 96.9 0.0067 1.4E-07 57.0 9.9 158 104-265 116-292 (465)
395 KOG2790 Phosphoserine aminotra 95.3 1 2.2E-05 42.4 14.9 244 98-373 51-326 (370)
396 PF05368 NmrA: NmrA-like famil 73.9 26 0.00056 32.1 9.4 57 166-224 43-99 (233)
397 PRK10886 DnaA initiator-associ 72.1 52 0.0011 29.6 10.5 40 180-224 102-141 (196)
398 cd02070 corrinoid_protein_B12- 65.3 67 0.0014 28.9 9.9 80 142-224 83-170 (201)
399 PF02310 B12-binding: B12 bind 65.3 23 0.00049 28.6 6.3 68 158-228 20-90 (121)
400 TIGR00511 ribulose_e2b2 ribose 63.9 69 0.0015 31.0 10.2 103 112-225 113-223 (301)
401 PRK08535 translation initiatio 63.1 63 0.0014 31.4 9.8 104 111-225 117-228 (310)
402 cd02067 B12-binding B12 bindin 62.0 36 0.00078 27.5 6.9 64 158-224 19-86 (119)
403 PRK02261 methylaspartate mutas 60.5 67 0.0014 27.0 8.4 59 158-219 23-82 (137)
404 PLN02476 O-methyltransferase 60.4 1.1E+02 0.0025 29.1 10.8 122 97-228 102-230 (278)
405 PRK05638 threonine synthase; V 57.1 85 0.0018 32.2 10.1 84 79-176 83-167 (442)
406 PRK08329 threonine synthase; V 54.5 68 0.0015 31.7 8.6 84 79-176 75-159 (347)
407 PLN02589 caffeoyl-CoA O-methyl 54.3 1.8E+02 0.0039 27.2 10.9 121 98-228 64-192 (247)
408 PF07085 DRTGG: DRTGG domain; 53.5 83 0.0018 24.8 7.5 49 169-224 42-90 (105)
409 PRK08335 translation initiatio 53.2 1.7E+02 0.0037 27.9 10.6 106 109-225 104-217 (275)
410 COG0296 GlgB 1,4-alpha-glucan 51.0 15 0.00033 39.0 3.5 37 197-233 205-241 (628)
411 COG1088 RfbB dTDP-D-glucose 4, 49.9 70 0.0015 30.8 7.3 112 142-254 27-173 (340)
412 TIGR01501 MthylAspMutase methy 48.8 64 0.0014 27.1 6.3 67 151-220 14-81 (134)
413 PF01596 Methyltransf_3: O-met 48.2 82 0.0018 28.6 7.4 121 98-228 30-157 (205)
414 COG1066 Sms Predicted ATP-depe 47.9 2.4E+02 0.0053 28.6 11.0 52 173-224 152-215 (456)
415 COG1954 GlpP Glycerol-3-phosph 47.9 33 0.00071 30.0 4.4 46 177-228 12-59 (181)
416 cd06448 L-Ser-dehyd Serine deh 47.9 1.8E+02 0.0039 28.2 10.3 112 79-203 19-136 (316)
417 PRK13937 phosphoheptose isomer 47.5 1.9E+02 0.0041 25.6 9.6 34 187-224 105-138 (188)
418 COG1587 HemD Uroporphyrinogen- 45.9 1.3E+02 0.0027 28.1 8.6 105 104-228 41-155 (248)
419 PRK06450 threonine synthase; V 45.7 1.2E+02 0.0025 30.0 8.6 107 79-202 68-175 (338)
420 smart00642 Aamy Alpha-amylase 45.5 19 0.00042 31.4 2.8 29 201-229 65-93 (166)
421 CHL00200 trpA tryptophan synth 44.9 1.4E+02 0.0031 28.2 8.7 85 138-225 116-208 (263)
422 TIGR03772 anch_rpt_subst ancho 44.9 1.9E+02 0.0042 30.0 10.3 70 141-223 371-449 (479)
423 COG0552 FtsY Signal recognitio 44.8 76 0.0017 31.0 6.9 130 127-263 153-304 (340)
424 COG1184 GCD2 Translation initi 44.5 2.5E+02 0.0054 27.1 10.2 101 114-225 119-227 (301)
425 COG0108 RibB 3,4-dihydroxy-2-b 43.4 52 0.0011 29.6 5.1 36 188-224 155-190 (203)
426 PF01008 IF-2B: Initiation fac 42.8 1E+02 0.0022 29.2 7.7 102 114-225 107-216 (282)
427 COG0036 Rpe Pentose-5-phosphat 42.5 2.7E+02 0.0059 25.5 10.0 123 134-276 77-214 (220)
428 cd02072 Glm_B12_BD B12 binding 42.4 96 0.0021 25.8 6.3 62 156-220 17-79 (128)
429 TIGR03573 WbuX N-acetyl sugar 42.3 1.4E+02 0.0031 29.4 8.7 115 102-227 43-168 (343)
430 TIGR00640 acid_CoA_mut_C methy 41.9 1.2E+02 0.0025 25.4 6.9 67 150-219 14-81 (132)
431 cd02071 MM_CoA_mut_B12_BD meth 41.8 1.1E+02 0.0024 24.9 6.7 66 156-224 17-86 (122)
432 KOG1465 Translation initiation 41.3 3.4E+02 0.0073 26.2 11.0 103 115-227 163-272 (353)
433 COG1606 ATP-utilizing enzymes 41.3 86 0.0019 29.4 6.3 98 115-228 19-122 (269)
434 COG1737 RpiR Transcriptional r 40.5 1.9E+02 0.0041 27.5 9.1 71 166-244 155-226 (281)
435 TIGR02370 pyl_corrinoid methyl 40.5 1.7E+02 0.0037 26.2 8.2 98 143-247 86-194 (197)
436 TIGR00524 eIF-2B_rel eIF-2B al 40.0 1.8E+02 0.0038 28.2 8.7 88 133-225 142-237 (303)
437 PF13460 NAD_binding_10: NADH( 39.9 2.2E+02 0.0048 24.4 8.9 83 126-220 8-90 (183)
438 TIGR02026 BchE magnesium-proto 39.5 90 0.0019 32.6 7.1 60 166-228 35-101 (497)
439 COG0352 ThiE Thiamine monophos 39.4 70 0.0015 29.2 5.5 92 178-272 24-120 (211)
440 COG1091 RfbD dTDP-4-dehydrorha 37.9 1.7E+02 0.0037 28.0 8.1 56 173-228 34-104 (281)
441 KOG2865 NADH:ubiquinone oxidor 37.8 2.3E+02 0.005 27.3 8.6 97 117-221 65-170 (391)
442 cd04795 SIS SIS domain. SIS (S 37.8 1.6E+02 0.0036 21.6 7.7 53 167-224 25-79 (87)
443 COG0742 N6-adenine-specific me 37.6 3E+02 0.0065 24.6 9.5 112 94-215 19-139 (187)
444 cd05013 SIS_RpiR RpiR-like pro 37.2 2.2E+02 0.0048 22.9 9.1 33 187-223 59-91 (139)
445 COG0373 HemA Glutamyl-tRNA red 37.1 3.2E+02 0.007 27.7 10.2 85 128-227 188-274 (414)
446 COG2870 RfaE ADP-heptose synth 36.5 62 0.0013 32.4 4.9 48 177-226 129-178 (467)
447 PRK12724 flagellar biosynthesi 36.1 2.1E+02 0.0046 29.2 8.7 99 127-228 238-344 (432)
448 PLN02522 ATP citrate (pro-S)-l 35.7 5.9E+02 0.013 27.4 12.4 118 147-272 62-183 (608)
449 COG2102 Predicted ATPases of P 34.9 2.1E+02 0.0045 26.3 7.7 121 116-252 3-148 (223)
450 PF00926 DHBP_synthase: 3,4-di 34.6 81 0.0018 28.3 5.0 36 188-224 151-186 (194)
451 PRK06372 translation initiatio 34.4 4E+02 0.0086 25.1 10.1 97 116-224 88-190 (253)
452 PRK13936 phosphoheptose isomer 34.4 3.4E+02 0.0073 24.2 10.7 34 187-224 110-143 (197)
453 KOG1663 O-methyltransferase [S 34.3 3.8E+02 0.0083 24.8 12.7 124 97-228 57-185 (237)
454 PRK08091 ribulose-phosphate 3- 33.5 2.5E+02 0.0054 25.9 8.2 66 173-244 126-205 (228)
455 TIGR01470 cysG_Nterm siroheme 33.4 3.5E+02 0.0077 24.3 9.2 92 115-227 10-103 (205)
456 COG1087 GalE UDP-glucose 4-epi 33.1 3.8E+02 0.0082 26.0 9.4 84 133-221 16-111 (329)
457 TIGR00160 MGSA methylglyoxal s 33.0 99 0.0022 26.2 4.9 49 179-227 63-112 (143)
458 cd02069 methionine_synthase_B1 32.8 3.8E+02 0.0083 24.4 9.8 79 143-224 90-174 (213)
459 PF14258 DUF4350: Domain of un 32.3 1.9E+02 0.0041 20.7 6.2 58 161-225 13-70 (70)
460 PRK08246 threonine dehydratase 32.3 1.3E+02 0.0028 29.1 6.5 83 79-176 40-123 (310)
461 PRK12723 flagellar biosynthesi 32.3 5.4E+02 0.012 25.9 11.2 80 146-228 213-297 (388)
462 cd01078 NAD_bind_H4MPT_DH NADP 32.3 3.5E+02 0.0076 23.8 11.7 85 135-228 46-130 (194)
463 PRK05678 succinyl-CoA syntheta 32.0 1.5E+02 0.0032 28.6 6.7 111 148-273 51-162 (291)
464 PRK09441 cytoplasmic alpha-amy 31.8 38 0.00082 35.1 2.9 31 198-228 73-103 (479)
465 PF00128 Alpha-amylase: Alpha 31.8 30 0.00066 32.8 2.1 31 198-228 44-74 (316)
466 PRK06371 translation initiatio 31.7 3.8E+02 0.0082 26.3 9.5 84 137-225 164-255 (329)
467 PRK11557 putative DNA-binding 31.6 4.4E+02 0.0095 24.7 10.1 22 202-223 185-206 (278)
468 TIGR00506 ribB 3,4-dihydroxy-2 31.6 1.1E+02 0.0024 27.6 5.4 35 189-224 157-191 (199)
469 PRK00014 ribB 3,4-dihydroxy-2- 31.5 1.1E+02 0.0023 28.3 5.4 35 189-224 172-206 (230)
470 TIGR00649 MG423 conserved hypo 30.9 3E+02 0.0064 27.9 9.2 75 140-220 318-401 (422)
471 PLN02672 methionine S-methyltr 30.5 3.8E+02 0.0082 31.0 10.4 122 101-227 428-565 (1082)
472 COG4472 Uncharacterized protei 30.4 1.2E+02 0.0026 22.8 4.4 34 412-446 2-35 (88)
473 KOG2741 Dimeric dihydrodiol de 30.0 1.1E+02 0.0023 30.1 5.3 71 148-228 58-131 (351)
474 TIGR02402 trehalose_TreZ malto 30.0 45 0.00097 35.2 3.1 35 197-231 151-185 (542)
475 cd01455 vWA_F11C1-5a_type Von 29.8 91 0.002 27.9 4.5 33 192-224 115-147 (191)
476 cd01137 PsaA Metal binding pro 29.6 1.9E+02 0.0041 27.7 7.1 68 141-223 177-253 (287)
477 PRK07048 serine/threonine dehy 29.1 2.5E+02 0.0054 27.2 8.0 85 79-176 42-127 (321)
478 PRK00910 ribB 3,4-dihydroxy-2- 29.0 1.3E+02 0.0028 27.6 5.4 35 189-224 168-202 (218)
479 PLN02970 serine racemase 29.0 4.5E+02 0.0097 25.6 9.8 85 79-176 45-130 (328)
480 PLN02379 pfkB-type carbohydrat 28.6 3.5E+02 0.0075 26.9 9.0 36 189-227 177-212 (367)
481 PRK11337 DNA-binding transcrip 28.6 4.6E+02 0.01 24.8 9.7 34 187-224 186-219 (292)
482 cd02065 B12-binding_like B12 b 28.5 2.5E+02 0.0055 22.4 6.9 61 166-228 26-89 (125)
483 cd01018 ZntC Metal binding pro 28.5 4.4E+02 0.0095 24.7 9.4 69 141-224 170-245 (266)
484 PLN02591 tryptophan synthase 28.4 5E+02 0.011 24.3 9.5 84 138-224 103-194 (250)
485 COG0074 SucD Succinyl-CoA synt 28.3 3.1E+02 0.0068 26.2 7.9 116 142-272 45-161 (293)
486 PRK15482 transcriptional regul 28.2 5E+02 0.011 24.5 9.8 33 187-223 181-213 (285)
487 PRK01792 ribB 3,4-dihydroxy-2- 28.1 1.3E+02 0.0029 27.4 5.3 35 189-224 167-201 (214)
488 PRK13602 putative ribosomal pr 28.1 1.4E+02 0.003 22.6 4.7 46 178-227 16-61 (82)
489 COG0300 DltE Short-chain dehyd 28.0 4E+02 0.0086 25.3 8.7 58 126-184 14-74 (265)
490 TIGR02104 pulA_typeI pullulana 27.8 42 0.00092 36.0 2.5 34 198-231 221-254 (605)
491 PRK06036 translation initiatio 27.8 4.2E+02 0.0091 26.1 9.1 82 137-225 175-265 (339)
492 cd01563 Thr-synth_1 Threonine 27.7 4.9E+02 0.011 25.1 9.8 84 79-176 41-125 (324)
493 TIGR02990 ectoine_eutA ectoine 27.4 5.1E+02 0.011 24.1 11.4 93 126-226 107-213 (239)
494 PRK13111 trpA tryptophan synth 27.4 4.1E+02 0.0089 25.0 8.8 80 142-224 119-205 (258)
495 COG2984 ABC-type uncharacteriz 26.9 3.3E+02 0.0072 26.5 8.0 58 166-227 187-247 (322)
496 PRK11302 DNA-binding transcrip 26.9 4.6E+02 0.01 24.6 9.3 34 187-224 174-207 (284)
497 COG1105 FruK Fructose-1-phosph 26.8 3.6E+02 0.0077 26.2 8.3 36 191-227 131-167 (310)
498 cd02068 radical_SAM_B12_BD B12 26.8 2.8E+02 0.0062 22.4 6.9 60 166-228 15-77 (127)
499 PRK05772 translation initiatio 26.5 5.4E+02 0.012 25.6 9.7 86 135-225 193-286 (363)
500 PLN03013 cysteine synthase 26.4 1.9E+02 0.0042 29.5 6.7 52 117-176 178-230 (429)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-64 Score=489.24 Aligned_cols=386 Identities=38% Similarity=0.581 Sum_probs=351.3
Q ss_pred CCChhHHHhh-cCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCe
Q 013079 38 WEDPAAALAS-ARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA 116 (450)
Q Consensus 38 ~~~~~~~~~~-~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~ 116 (450)
.+.+.+++++ |+.....+|++++|||.++||.+++.+.....+... ...|.|+|.+||++..|++.+|+++|++.
T Consensus 5 ~~~~~T~~v~~g~~~~~~~gav~~PI~~tStf~~~~~~~~~~~~~~~----~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~ 80 (396)
T COG0626 5 KLSLTTRLVHAGRRPDDLTGAVNPPIYLTSTFVFDSAGEGLDAFAGE----EGGYDYSRTGNPTRDALEEALAELEGGED 80 (396)
T ss_pred ccccceeeEEcccccccCCCcccCCeeeeeeecccChhhhhhhcccc----ccCcccccCCCccHHHHHHHHHHhhCCCc
Confidence 3467788888 445667899999999999999999987776666333 45699999999999999999999999999
Q ss_pred EEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEe
Q 013079 117 AYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE 196 (450)
Q Consensus 117 ~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~ 196 (450)
++.++| |+.||..++..++++||+|++++..|+++...+..++++ +|+++++++..+.+++++++..++|++|++|
T Consensus 81 ~~afsS---GmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~-~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lE 156 (396)
T COG0626 81 AFAFSS---GMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQK-FGVEVTFVDPGDDEALEAAIKEPNTKLVFLE 156 (396)
T ss_pred EEEecC---cHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHh-cCeEEEEECCCChHHHHHHhcccCceEEEEe
Confidence 999999 999999999999999999999999999999999988888 9999999998888888888823699999999
Q ss_pred cCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHH-HHHHHHH
Q 013079 197 SISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAN-LVNSMMD 274 (450)
Q Consensus 197 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~-~~~~l~~ 274 (450)
+|.||+..+.||++|+++|+++|+++|+|++| +++.++|+++|+|++++|++|+++|+++.++|+++++.+ +.+.+..
T Consensus 157 tPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~ 236 (396)
T COG0626 157 TPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFF 236 (396)
T ss_pred CCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHH
Confidence 99999999999999999999999999999999 889999999999999999999999999999998876654 4555433
Q ss_pred HhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcC
Q 013079 275 LHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFG 352 (450)
Q Consensus 275 ~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g 352 (450)
... ...|..+++..||+++++++++..|++++.+++..++++|++++. +|.||++++||+|+++++++. |+|
T Consensus 237 ~~~---~~~G~~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~---g~g 310 (396)
T COG0626 237 AQR---ANTGAVLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMT---GYG 310 (396)
T ss_pred HHH---hhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcC---CCc
Confidence 222 158999999999999999999999999999999999999999987 899999999999999999987 699
Q ss_pred cEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHH
Q 013079 353 GLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRW 432 (450)
Q Consensus 353 ~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i 432 (450)
++++|++++.+.+.+|++.|+... +++|+|+.+|++++|+.++|..++.+.+...|+++++||+|+| .|+++++|
T Consensus 311 g~~Sf~l~~~~~~~~f~~~L~l~~----~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG-lEd~eDLi 385 (396)
T COG0626 311 GLFSFELKNEEAAKKFLDSLKLFK----LAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG-LEDVEDLI 385 (396)
T ss_pred eEEEEEeCChHHHHHHHHhCCccE----EeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEec-CCCHHHHH
Confidence 999999996567899999999744 7999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHh
Q 013079 433 SQFEKALSRM 442 (450)
Q Consensus 433 ~~l~~al~~~ 442 (450)
++|++||+++
T Consensus 386 ~Dl~~Al~~~ 395 (396)
T COG0626 386 ADLEQALAKA 395 (396)
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 2
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-63 Score=461.75 Aligned_cols=388 Identities=33% Similarity=0.512 Sum_probs=353.2
Q ss_pred CCChhHHHhhcCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeE
Q 013079 38 WEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (450)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~ 117 (450)
.+.+.+..+|+....+.+|+...|||++|+|.|++.+.....|.-+ .-++.|+|..||+.+.|+++||.++|.-..
T Consensus 5 ~~~f~T~~vHag~~d~~t~ara~PIyqtTsy~F~d~~haa~lF~l~----~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa 80 (426)
T COG2873 5 NWGFETLAVHAGQEDPTTGARAVPIYQTTSYVFDDTDHAAALFGLK----EPGNIYTRIMNPTTDVLEERIAALEGGVAA 80 (426)
T ss_pred ccCcchhhhcCCCCCCCCCceecceeeeeeeecCCHHHHHHHhCCC----cCCceeeeccCchHHHHHHHHHHhhcchhh
Confidence 3567788888655578889999999999999999999999888755 346899999999999999999999999899
Q ss_pred EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEec
Q 013079 118 YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFES 197 (450)
Q Consensus 118 ~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~ 197 (450)
+.++| |++|+..++..++++||+|+.++..|+++...+...+++ +|++++|++.+|++.++++| +++||+|++|+
T Consensus 81 ~a~aS---G~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~-~Gi~v~fvd~~d~~~~~~aI-~~nTkavf~Et 155 (426)
T COG2873 81 LAVAS---GQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKR-LGIEVRFVDPDDPENFEAAI-DENTKAVFAET 155 (426)
T ss_pred hhhcc---chHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHh-cCcEEEEeCCCCHHHHHHHh-CcccceEEEEe
Confidence 99999 999999999999999999999999999999999888887 99999999999999999999 99999999999
Q ss_pred CCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCH--HHH-----
Q 013079 198 ISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPA--NLV----- 269 (450)
Q Consensus 198 ~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~--~~~----- 269 (450)
..||-+.+.|+++|+++||++|+++|||+++ +++.+.|.+.|+|+|++|++|++|++|..|||.++-.. ++.
T Consensus 156 igNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rf 235 (426)
T COG2873 156 IGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRF 235 (426)
T ss_pred ccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCC
Confidence 9999999999999999999999999999999 77889999999999999999999999999999886332 111
Q ss_pred ----------------H------HHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--
Q 013079 270 ----------------N------SMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL-- 325 (450)
Q Consensus 270 ----------------~------~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~-- 325 (450)
+ -+.+.|....+..|.++++..|++.+.+++++..|++++.+++.+++++|+.||.
T Consensus 236 P~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~ 315 (426)
T COG2873 236 PEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVA 315 (426)
T ss_pred cccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCee
Confidence 1 0112333456789999999999999999999999999999999999999999987
Q ss_pred eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhccccccccccccccccccccccccccCCCCC
Q 013079 326 KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELN 404 (450)
Q Consensus 326 ~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~ 404 (450)
+|+||+++++|+|.+++++..+ |+|++++|.+++ .+...+|++.|+..- .....|.+.|++.+|++++|+.++
T Consensus 316 ~V~YpgL~~~~~h~la~kyl~~--g~g~vltF~~kgg~ea~~~fi~~l~L~s----~laNvGD~rsLvIHPAsTTH~ql~ 389 (426)
T COG2873 316 WVNYPGLASHPYHALAKKYLPK--GAGAVLTFGVKGGYEAGKKFIDALKLFS----HLANIGDARSLVIHPASTTHRQLS 389 (426)
T ss_pred eeecCCCCCCcchhHHHhhccC--CCceEEEEEecChHHHHHHHHHHHHHHH----hhccccccceeEecCcccchhcCC
Confidence 8999999999999999999875 889999999994 478899999998633 577999999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 405 AEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 405 ~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
++++.++|+.+++||+|+| .|+++|++.+|++||++
T Consensus 390 ~ee~~~aGv~~~~IRlSVG-IEd~~DiiaDl~qAl~~ 425 (426)
T COG2873 390 EEEQAAAGVTPDLIRLSVG-IEDIDDIIADLEQALEA 425 (426)
T ss_pred HHHHHhcCCCCCcEEEEec-cCCHHHHHHHHHHHHhc
Confidence 9999999999999999999 99999999999999975
No 3
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=4.7e-62 Score=481.89 Aligned_cols=376 Identities=41% Similarity=0.645 Sum_probs=323.2
Q ss_pred HHHhh-cCCCC-CCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEe
Q 013079 43 AALAS-ARHEF-GEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCT 120 (450)
Q Consensus 43 ~~~~~-~~~~~-~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~t 120 (450)
|+++| |++.. ..+++++|||+.|+||.+++.+++ +.+.+. ...|.|+|.++|++..++++||+++|++.++++
T Consensus 2 T~~vh~g~~~~~~~~~~v~~pi~~sstf~~~~~~~~-~~~~~~----~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~ 76 (386)
T PF01053_consen 2 TLLVHAGRDPDEDQTGAVNPPIYQSSTFVFDSAEEL-DAFAGE----EKGYIYSRYGNPTVRALEQRLAALEGGEDALLF 76 (386)
T ss_dssp HHHHHTTTTGGTSTTTBSS--B---SBBBBSSHHHH-HHHTTS----SSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEE
T ss_pred cceEeCCCCCCCCCCCCeeCCccccccCcccchHHH-HhhcCC----CCCcceeccccccHHHHHHHHHHhhcccceeec
Confidence 44555 55544 478999999999999999999888 666554 445999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCC
Q 013079 121 ASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 200 (450)
Q Consensus 121 sg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~N 200 (450)
+| |+.|+.+++.+++++||+|+++...|+++...++.++++ .|+++.+++..|++++++++ +++|++|++|+|.|
T Consensus 77 ~S---GmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~-~gv~v~~~d~~d~~~l~~~l-~~~t~~v~~EspsN 151 (386)
T PF01053_consen 77 SS---GMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPR-FGVEVTFVDPTDLEALEAAL-RPNTKLVFLESPSN 151 (386)
T ss_dssp SS---HHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHH-TTSEEEEESTTSHHHHHHHH-CTTEEEEEEESSBT
T ss_pred cc---hHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcc-cCcEEEEeCchhHHHHHhhc-cccceEEEEEcCCC
Confidence 99 999999999999999999999999999999999877776 89999999999999999999 88999999999999
Q ss_pred CcccccCHHHHHHHHHhcC-CEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcC--HHHHHHHHHHh
Q 013079 201 PTLAVANIPELSRLAHDKG-VTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGP--ANLVNSMMDLH 276 (450)
Q Consensus 201 ptG~v~~l~~I~~la~~~g-i~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~--~~~~~~l~~~~ 276 (450)
|+..+.|+++|+++|+++| ++++||+++ +++.++|+++|+|++++|++|+++|+++.+||+++.+ .++.+.++..+
T Consensus 152 P~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~ 231 (386)
T PF01053_consen 152 PTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR 231 (386)
T ss_dssp TTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh
Confidence 9999999999999999998 999999999 7888999999999999999999999999999999865 47778887766
Q ss_pred hhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 277 QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 277 ~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
. ..|..+++..|+++.++++++..|++++.+++..++++|++++. +|.||+++++|+|+++++++. |+|++
T Consensus 232 ~----~~G~~~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~---g~ggl 304 (386)
T PF01053_consen 232 R----LLGATLSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMS---GGGGL 304 (386)
T ss_dssp H----HHT-B--HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCS---SCTSE
T ss_pred h----hcCccchHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeeccc---ccCce
Confidence 6 78999999999999999999999999999999999999999987 899999999999999999987 78889
Q ss_pred EEEEeCCHH-HHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHH
Q 013079 355 LCLDMETEE-KANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWS 433 (450)
Q Consensus 355 ~~~~l~~~~-~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~ 433 (450)
++|++++.. .+.+|++.|+... +++|+|+.+|++++|...+|..++++.+..+|+++++||||+| +|+++|+|+
T Consensus 305 ~sf~l~~~~~~~~~f~~~l~l~~----~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG-lEd~~dLi~ 379 (386)
T PF01053_consen 305 LSFELKGGEEAARRFLDALKLFS----IAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG-LEDPDDLIA 379 (386)
T ss_dssp EEEEESSHHHHHHHHHHH-SSSE----ESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE---SS-HHHHHH
T ss_pred eEEEeccchhhhHhHHhhhhhHh----hhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEec-cCCHHHHHH
Confidence 999999764 7899999999733 7999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHH
Q 013079 434 QFEKALS 440 (450)
Q Consensus 434 ~l~~al~ 440 (450)
+|.+||+
T Consensus 380 Dl~~AL~ 386 (386)
T PF01053_consen 380 DLEQALE 386 (386)
T ss_dssp HHHHHHH
T ss_pred HHHHhcC
Confidence 9999985
No 4
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=5.5e-61 Score=482.64 Aligned_cols=403 Identities=86% Similarity=1.304 Sum_probs=358.1
Q ss_pred CCCCChhHHHhhcCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC
Q 013079 36 AAWEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE 115 (450)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~ 115 (450)
.++.||...++|..+....+++++||||+|+||.+++.+.+.+++.+..+.+...|.|+|..+|++++|++.+|+++|.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~ 92 (418)
T PLN02242 13 SKEEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTE 92 (418)
T ss_pred hcCCChHHHHhcCCCCCCCCCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCC
Confidence 45678999999987776666888999999999999999888888865433222358999999999999999999999999
Q ss_pred eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcC-CceEEE
Q 013079 116 AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQG-RTKVLY 194 (450)
Q Consensus 116 ~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~-~t~lv~ 194 (450)
.+++|+| |++|+.+++.+++++||+|+++.+.|+++...+...+.+..|+++++++..|++++++++ ++ +|++|+
T Consensus 93 ~~l~~~s---G~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i-~~~~tklV~ 168 (418)
T PLN02242 93 AAYCTAS---GMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAV-VPGKTKVLY 168 (418)
T ss_pred eEEEEcc---HHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhc-CcCCCEEEE
Confidence 9999999 999999999999999999999999999998877555544479999999988999999999 76 599999
Q ss_pred EecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHH
Q 013079 195 FESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD 274 (450)
Q Consensus 195 i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~ 274 (450)
+++|+||||.+.|+++|+++|+++|+++|+|++|..+.+++..+|+|++++|+||+++++|+++||++++++++++.++.
T Consensus 169 lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~ 248 (418)
T PLN02242 169 FESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMD 248 (418)
T ss_pred EecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHH
Confidence 99999999999999999999999999999999997777788888999999999999999999888999999999888876
Q ss_pred HhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 275 LHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 275 ~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
.+.+.....|..+.++.|++.++.++++..|++++.+++++++++|++++.+|.+|+++++|+|++++++++...|+|++
T Consensus 249 ~~~~~~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~ 328 (418)
T PLN02242 249 LHHGALMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGL 328 (418)
T ss_pred HhhhhhhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeE
Confidence 64421235677888889999888999999999999999999999999998899999999999999999998655689999
Q ss_pred EEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC-HHHHHH
Q 013079 355 LCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT-LDQRWS 433 (450)
Q Consensus 355 ~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~-~~~~i~ 433 (450)
++|++++.+.+.+|++.++....+..+++|+|+++|++++|++++|..++++.+...|+++++||||+| .|+ .+|+|+
T Consensus 329 ~sf~l~~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvG-lE~~~~dli~ 407 (418)
T PLN02242 329 LCLDMDTEERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVG-YTGTLEQRWS 407 (418)
T ss_pred EEEEECCHHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec-CCCCHHHHHH
Confidence 999999878899999999863222237999999999999999999999999999999999999999999 995 999999
Q ss_pred HHHHHHHHhh
Q 013079 434 QFEKALSRMQ 443 (450)
Q Consensus 434 ~l~~al~~~~ 443 (450)
+|++||++++
T Consensus 408 dl~~al~~~~ 417 (418)
T PLN02242 408 QFEKALSAMK 417 (418)
T ss_pred HHHHHHHHhh
Confidence 9999999874
No 5
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.2e-59 Score=467.75 Aligned_cols=375 Identities=29% Similarity=0.425 Sum_probs=335.2
Q ss_pred hhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
+.+.++|.. .....+++++||||+++||.+++.. . ...|.|+|+++|+.+.|+++||+++|++.+++
T Consensus 6 ~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~--------~----~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivv 73 (388)
T PRK08861 6 PATIAVRTGIESDSQYHAVVPPIYLSTNYGFPAFG--------E----VPKYDYTRSGNPNRGLLEQTLSELESGKGAVV 73 (388)
T ss_pred cccceeECCCCCCCCCCCccCCcccCcceEeCCcC--------c----cCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Confidence 445555533 3334468999999999999998731 1 23588999999999999999999999999999
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
|+| |++|+++++.+++++||+|+++.+.|++....+.....+ .|+++.+++..|++++++++ +++|++|++++|+
T Consensus 74 t~g---g~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~-~gi~v~~vd~~d~e~l~~~i-~~~tklV~lesP~ 148 (388)
T PRK08861 74 TNC---GTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANK-GDFKVQFVDQSDAAALDAAL-AKKPKLILLETPS 148 (388)
T ss_pred ECC---HHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhc-CCeEEEEECCCCHHHHHHhc-CcCCeEEEEECCC
Confidence 999 999999999999999999999999999877766544444 68999999888999999999 7899999999999
Q ss_pred CCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhh
Q 013079 200 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQ 277 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~ 277 (450)
||||.+.|+++|.++|+++|+++|+|++| .++...|.++|+|++++|+||+++++++.+||+++. ++++.++++..+.
T Consensus 149 NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~ 228 (388)
T PRK08861 149 NPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGN 228 (388)
T ss_pred CCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHh
Confidence 99999999999999999999999999999 566678888999999999999999988777898876 4567777776665
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
..|..+++..+++++++++++..|++++.+++..++++|+++|. +|.||+++++|+|+++++++. |+|+++
T Consensus 229 ----~~G~~~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~---g~gg~~ 301 (388)
T PRK08861 229 ----CIGATGTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQS---GFGSML 301 (388)
T ss_pred ----ccCCCCChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCC---CCCceE
Confidence 67999999999999999999999999999999999999999987 899999999999999999885 799999
Q ss_pred EEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 356 CLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 356 ~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
+|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .|+.+|+|++
T Consensus 302 sf~~~~~~~~~~~f~~~l~l~~----~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG-lE~~~dli~D 376 (388)
T PRK08861 302 SFEFAGSFEQLKVFVKALALFS----LAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVG-LEDAQDLIAD 376 (388)
T ss_pred EEEeCCCHHHHHHHHhcCCcce----EccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHH
Confidence 99997 4677889999999743 7999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHhhh
Q 013079 435 FEKALSRMQD 444 (450)
Q Consensus 435 l~~al~~~~~ 444 (450)
|++||+++.+
T Consensus 377 l~~al~~~~~ 386 (388)
T PRK08861 377 LDQAFAKAAE 386 (388)
T ss_pred HHHHHHHHHh
Confidence 9999998865
No 6
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3.9e-59 Score=467.21 Aligned_cols=384 Identities=33% Similarity=0.570 Sum_probs=343.6
Q ss_pred ChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Q 013079 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (450)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~ 118 (450)
++.+.++|.. .....++++.||||.++||.+++.+++.+.+.+. ...|.|+|+.+|+++++++.||+++|++.++
T Consensus 8 ~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i 83 (398)
T PRK08249 8 GVGTKAVWAGEKEYLPYGATQVPVVLSVAYGYDDIDEWYDVALGK----KPGHIYSRNTNPTVQAFEEKVRILEGAEAAT 83 (398)
T ss_pred CcccceeeCCCCCCCCCCCccCCccCCcceecCCHHHHHHhhcCC----cCCccccCCCChHHHHHHHHHHHHhCCCeEE
Confidence 3555566643 3334568999999999999999988777766543 2458999999999999999999999999999
Q ss_pred EecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecC
Q 013079 119 CTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESI 198 (450)
Q Consensus 119 ~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~ 198 (450)
+++| |++|+.+++.+++++||+|+++.+.|+++...+...+++ .|+++.+++..|++++++++ +++|++|++++|
T Consensus 84 ~~ss---G~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~-~Gi~v~~vd~~d~e~l~~~i-~~~tklV~ie~p 158 (398)
T PRK08249 84 AFST---GMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPR-MGVDVTLCETGDHEQIEAEI-AKGCDLLYLETP 158 (398)
T ss_pred EeCC---hHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhh-CCeEEEEcCCCCHHHHHHhc-CCCCeEEEEECC
Confidence 9999 999999999999999999999999999988777655555 79999999988999999999 889999999999
Q ss_pred CCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh
Q 013079 199 SNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ 277 (450)
Q Consensus 199 ~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~ 277 (450)
+||||.+.|+++|.++|+++|+++|+|++| .++...+...++|++++|+||+++++|+++||++++++++++.++..+.
T Consensus 159 ~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~ 238 (398)
T PRK08249 159 TNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYRE 238 (398)
T ss_pred CCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999999999999 4555566677999999999999999998888999999999888877665
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
..|..+++..+++++++++++..|++++.+++..+.++|++++. +|.||+++++|+|+++++++. |+|+++
T Consensus 239 ----~~g~~~s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~---g~g~~~ 311 (398)
T PRK08249 239 ----INGATMDPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMR---GFGGIL 311 (398)
T ss_pred ----hcCCCCCHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCC---CCCceE
Confidence 57788899999999999999999999999999999999999986 899999999999999999985 799999
Q ss_pred EEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 356 CLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 356 ~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
+|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .|+.+|+|++
T Consensus 312 sf~~~~~~~~~~~f~~~l~l~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~d 386 (398)
T PRK08249 312 SFVLKGGMDTVKRLLPKLRYAH----RAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVG-IEDTEDLIAD 386 (398)
T ss_pred EEEEcCCHHHHHHHHHhCCcce----EccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHH
Confidence 99997 5566889999999743 7999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHhhh
Q 013079 435 FEKALSRMQD 444 (450)
Q Consensus 435 l~~al~~~~~ 444 (450)
|.+||+.+..
T Consensus 387 l~~al~~~~~ 396 (398)
T PRK08249 387 LEQAFAHLES 396 (398)
T ss_pred HHHHHHHhhh
Confidence 9999998754
No 7
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=3e-59 Score=462.71 Aligned_cols=378 Identities=21% Similarity=0.362 Sum_probs=332.4
Q ss_pred hhHHHhh-cCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 41 PAAALAS-ARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 41 ~~~~~~~-~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
+.+.++| +......+|+++||||.++||.+++.+++.+.+.+. ....|.|+|.+||+++.|+++||+++|++.+++
T Consensus 6 ~~t~~~~~~~~~~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~---~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~~ 82 (395)
T PRK08114 6 LDTQLVNAGRSKKYTQGSVNSVIQRASSLVFDSVEAKKHATRNR---ANGELFYGRRGTLTHFSLQEAMCELEGGAGCAL 82 (395)
T ss_pred cchheEeCCCCCCCCCCCccCCeeCCCceecCCHHHHHHhhccC---cCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Confidence 4455555 432333458999999999999999998888777543 123589999999999999999999999999999
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
++| ||+|+++++.+++++||+|++++..|+++...+...+++ .|+++.+++..|.+++++++ +++|++|++++|+
T Consensus 83 ~~S---GmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~-~Gi~v~~vd~~d~~~l~~~l-~~~TrlV~~Etps 157 (395)
T PRK08114 83 YPC---GAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSK-LGVTTTWFDPLIGADIAKLI-QPNTKVVFLESPG 157 (395)
T ss_pred EhH---HHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHh-cCcEEEEECCCCHHHHHHhc-CCCceEEEEECCC
Confidence 999 999999999999999999999999999999988777776 89999999988999999999 8899999999999
Q ss_pred CCcccccCHHHHHHHHHhc--CCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh
Q 013079 200 NPTLAVANIPELSRLAHDK--GVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH 276 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~--gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~ 276 (450)
||+|.+.|+++|+++||++ |++++||++| .++.++|.++|+|++++|+||+++++++.++|+++.+++.++.++..+
T Consensus 158 Np~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~ 237 (395)
T PRK08114 158 SITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENS 237 (395)
T ss_pred CCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHH
Confidence 9999999999999999998 4999999999 777799999999999999999999999999998888887777666554
Q ss_pred hhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 277 QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 277 ~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
. ..|..+++..|+++.++++++..|++++.+++..++++|+++|. +|.||+++++|+|+++++++. |+|++
T Consensus 238 ~----~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~---g~gg~ 310 (395)
T PRK08114 238 Y----LMGQMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFT---GSSGL 310 (395)
T ss_pred H----hccCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCC---CCceE
Confidence 4 67999999999999999999999999999999999999999987 899999999999999999986 78999
Q ss_pred EEEEeCC---HHHHHHHHHHhhccccccccccccccccccccc--cccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHH
Q 013079 355 LCLDMET---EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSC--SGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLD 429 (450)
Q Consensus 355 ~~~~l~~---~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~--~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~ 429 (450)
++|++++ .+.+.+|++.|+... +++|+|+.+|++++ |...++.. +++ ..++.+++||||+| .|+.+
T Consensus 311 ~sf~l~~~~~~~~~~~f~~~l~l~~----~a~SlGg~~SLi~~~~~~~~~~~~-~~~---~~~~~~~liRlSvG-lEd~~ 381 (395)
T PRK08114 311 FSFVLKKKLTDEQLANYLDNFSLFS----MAYSWGGFESLILANQPEEIAAIR-PAG---EVDFTGTLIRLHIG-LEDVD 381 (395)
T ss_pred EEEEecCcccHHHHHHHHHhCCcce----eecccCCccceeccCCchhhhccC-Chh---HhcCCCCeEEEEec-cCCHH
Confidence 9999974 567889999998743 79999999999984 44444333 322 34677799999999 99999
Q ss_pred HHHHHHHHHHHHh
Q 013079 430 QRWSQFEKALSRM 442 (450)
Q Consensus 430 ~~i~~l~~al~~~ 442 (450)
++|++|.+||+++
T Consensus 382 DLi~Dl~~Al~~~ 394 (395)
T PRK08114 382 DLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999865
No 8
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=3.4e-59 Score=463.80 Aligned_cols=381 Identities=25% Similarity=0.386 Sum_probs=335.6
Q ss_pred hhHHHhhcCC-CCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 41 PAAALASARH-EFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 41 ~~~~~~~~~~-~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
|.+.++|... ....+|+++|||+.++||.++..+.+...+.+.. ...|.|+|..+|+...||+.||++++++.+++
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~---~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~ 81 (394)
T PRK09028 5 KATKIVSAGRDKKWTKGVINPPVFRASTVVFDTVAEMRHAAKNRA---NGEMFYGRRGTPTHFAFQAAIVELEGGAGTAL 81 (394)
T ss_pred ccceeEEcCCCCCCCCCCccCCeeCCCCcccCCHHHHHHHhccCc---cCCceecCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 4455556433 2233589999999999999999888887775432 13488999999999999999999999999999
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
|+| |++|+++++.+++++||+||++++.|+++...+...+.+ .|+++.+++..+.+++++++ +++|++|++++|+
T Consensus 82 ~~s---G~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~-~Gi~v~~v~~~~~e~l~~~l-~~~TklV~lesps 156 (394)
T PRK09028 82 YPS---GAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKG-FGIETTYYDPMIGEGIRELI-RPNTKVLFLESPG 156 (394)
T ss_pred ECC---HHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhh-cceEEEEECCCCHHHHHHhc-CcCceEEEEECCC
Confidence 999 999999999999999999999999999998877655665 89999999887888999999 8899999999999
Q ss_pred CCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhh
Q 013079 200 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG 278 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~ 278 (450)
||||.+.|+++|+++|+++|+++++|++| .++.++|.++|+|++++|+||+++|+++.++|+++.++++++.+...+.
T Consensus 157 NPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~- 235 (394)
T PRK09028 157 SITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSY- 235 (394)
T ss_pred CCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHH-
Confidence 99999999999999999999999999999 7777899999999999999999999999999998888877777765554
Q ss_pred hhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013079 279 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 356 (450)
Q Consensus 279 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 356 (450)
..|..+++..|+++.++++++..|++++.+++..++++|++++. +|.||+++++|+|+++++++. |+|++++
T Consensus 236 ---~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~---g~gg~~s 309 (394)
T PRK09028 236 ---LMGQCTSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFS---GSNGLFS 309 (394)
T ss_pred ---hcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhcc---CCCceEE
Confidence 67899999999999999999999999999999999999999986 899999999999999999986 7899999
Q ss_pred EEeC--CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 357 LDME--TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 357 ~~l~--~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
|+++ +.+.+.+|++.|+... +++|+|+.+|++.+|+++++... ....++.+++||||+| .|+.+|+|++
T Consensus 310 f~l~~~~~~~~~~f~~~l~l~~----~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svG-lEd~~dLi~D 380 (394)
T PRK09028 310 FVLKQGDPKAVTALVEGMQHFK----MGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIG-LEDVDDLIAD 380 (394)
T ss_pred EEECCCCHHHHHHHHHhCCcce----EecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeC-cCCHHHHHHH
Confidence 9997 4567889999999643 79999999999999987764433 2236788899999999 9999999999
Q ss_pred HHHHHHHhhhc
Q 013079 435 FEKALSRMQDS 445 (450)
Q Consensus 435 l~~al~~~~~~ 445 (450)
|.+||++.+.+
T Consensus 381 l~~Al~~~~~~ 391 (394)
T PRK09028 381 LEAGFERYNAV 391 (394)
T ss_pred HHHHHHHHHHH
Confidence 99999987643
No 9
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=9.7e-59 Score=464.17 Aligned_cols=391 Identities=28% Similarity=0.426 Sum_probs=341.1
Q ss_pred CChhHHHhhcCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Q 013079 39 EDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (450)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~ 118 (450)
++|.+.++|.......+|+++|||+.+|||.+++.+.+...+... .++|.|+|.++|+++.|++.||+++|++.++
T Consensus 5 ~~~~t~~~~~g~~~~~~~~~~~PI~~sst~~f~~~~~~~~~~~~~----~~g~~ysR~~nPtv~~lE~~la~leg~~~av 80 (432)
T PRK06702 5 WGKGTICVQGGYTPKNGEPRVLPLYQSTTYKYDTSDDLAALFNLE----AEGYIYTRIGNPTLAAFEQKLAELEGGVGAV 80 (432)
T ss_pred CCcchHheeCCCCCCCCCCccCCccCCcceecCCHHHHHHHHhcc----ccCceeECCCCcHHHHHHHHHHHHhCCCcEE
Confidence 457777777442233478999999999999999988777766533 2458899999999999999999999999999
Q ss_pred EecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEec
Q 013079 119 CTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFES 197 (450)
Q Consensus 119 ~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~ 197 (450)
+|+| ||+|+.+++.+++++||+||++.+.|.++...+...+.+ .|+++++++.. |+++++++| +++|++|++++
T Consensus 81 ~~~S---G~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~-~Gi~v~~vd~~~d~~~l~~~I-~~~Tk~I~~e~ 155 (432)
T PRK06702 81 ATAS---GQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRK-LGIDVTFFNPNLTADEIVALA-NDKTKLVYAES 155 (432)
T ss_pred EECC---HHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHhC-CcCCeEEEEEc
Confidence 9999 999999999999999999999999999998886655555 89999999984 999999999 88999999999
Q ss_pred CCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHH---------
Q 013079 198 ISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAN--------- 267 (450)
Q Consensus 198 ~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~--------- 267 (450)
|+||++.+.|+++|+++|+++|+++++|++| .++.++|.++|+|++++|+||+++++++.+||+++....
T Consensus 156 pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~ 235 (432)
T PRK06702 156 LGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYP 235 (432)
T ss_pred CCCccccccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCccccccccc
Confidence 9999999999999999999999999999999 788889999999999999999999999999998873221
Q ss_pred -HHH-----------------H-HHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--e
Q 013079 268 -LVN-----------------S-MMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--K 326 (450)
Q Consensus 268 -~~~-----------------~-l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~ 326 (450)
++. . +...+.......|..+++..+++++++++++..|++++.+++..++++|++++. +
T Consensus 236 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~ 315 (432)
T PRK06702 236 ELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEW 315 (432)
T ss_pred ccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcce
Confidence 110 0 101111122356789999999999999999999999999999999999999986 7
Q ss_pred eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCH
Q 013079 327 VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNA 405 (450)
Q Consensus 327 v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~ 405 (450)
|.||+++++|+|++++++++. |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++.+|++++|..++.
T Consensus 316 V~yPgl~~~p~~~l~~~~~~~--g~gg~~sf~l~~~~~~~~~f~~~l~l~~----~a~slGg~~Slv~~p~~~th~~~~~ 389 (432)
T PRK06702 316 VNYPGLDSNENYSLAQKYLKK--GASGVLTFGIKGGLEAAKEFIANVKLAT----LVTHVADARTCVIHPASTTHRQLSA 389 (432)
T ss_pred EECCCCCCCccHHHHHHhCcC--CCceEEEEEecCCHHHHHHHHHhCccce----eccccCCCCcceECCCCCCcccCCH
Confidence 999999999999999999853 78999999997 5677889999999743 8999999999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Q 013079 406 EEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDS 445 (450)
Q Consensus 406 ~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~ 445 (450)
+.+...|+++++||||+| .|+.+|++++|++||+.=++.
T Consensus 390 ~~~~~~Gi~~~liRlSvG-lEd~eDLi~Dl~~Al~~~~~~ 428 (432)
T PRK06702 390 EDQRLAGVTSDLIRLSVG-IEDVSDIIADLEAALVGGKQH 428 (432)
T ss_pred HHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHhcCccc
Confidence 999999999999999999 999999999999999865443
No 10
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.5e-58 Score=464.50 Aligned_cols=396 Identities=30% Similarity=0.478 Sum_probs=344.3
Q ss_pred ccCCCCChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHh
Q 013079 34 TAAAWEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALE 112 (450)
Q Consensus 34 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~ 112 (450)
+|.+..++.+.++|.. .....+|+++|||+.++||.+++.+++.+.+... ...|.|+|..+|+++++++.+|+++
T Consensus 2 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~----~~~~~y~R~~~p~~~~le~~lA~l~ 77 (433)
T PRK08134 2 PGMSPPGFDTLALHAGAAPDPATGARAVPIHLTTSFVFRDSDHAAALFNLE----RAGHVYSRISNPTVAVLEERVAALE 77 (433)
T ss_pred CCCCCCCcchhheeCCCCCCCCCCCccCCccCCCccccCCHHHHHHhhccc----ccCceeecCcChHHHHHHHHHHHHh
Confidence 4556667777777754 3345578999999999999999998888776543 2468999999999999999999999
Q ss_pred CCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceE
Q 013079 113 GTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKV 192 (450)
Q Consensus 113 g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~l 192 (450)
|++.+++|+| ||+|+++++.+++++||+||++..+|+++...+...+.+ .|+++++++.+|++++++++ +++|++
T Consensus 78 g~~~av~~sS---Gt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~-~Gi~v~~vd~~d~~~l~~~i-~~~Tkl 152 (433)
T PRK08134 78 GGVGAIATAS---GQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRR-FGIETTFVKPGDIDGWRAAI-RPNTRL 152 (433)
T ss_pred CCCcEEEeCC---HHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhh-CCeEEEEECCCCHHHHHHhc-CCCCeE
Confidence 9999999999 999999999999999999999999999988877655555 79999999998999999999 889999
Q ss_pred EEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHH---
Q 013079 193 LYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANL--- 268 (450)
Q Consensus 193 v~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~--- 268 (450)
|++++++||+|.+.|+++|+++|+++|+++|+|++| .+....+.++|+|++++|+||+++++|+.+||+++....+
T Consensus 153 V~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~ 232 (433)
T PRK08134 153 LFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWE 232 (433)
T ss_pred EEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccc
Confidence 999999999999999999999999999999999999 6666778888999999999999999999998877642110
Q ss_pred --------HH-----------------H-HHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013079 269 --------VN-----------------S-MMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 269 --------~~-----------------~-l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
.. . +...+.......|..+++..|++++++++++..|++++.+++..++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~ 312 (433)
T PRK08134 233 ASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLAS 312 (433)
T ss_pred cccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0 011111122356888999999999999999999999999999999999999
Q ss_pred CCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccccccccccccccc
Q 013079 323 LGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSST 399 (450)
Q Consensus 323 ~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~ 399 (450)
++. +|.||+++++|+|++++++++. |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++
T Consensus 313 ~p~V~~V~yP~l~~~p~~~~~~~~~~~--g~gg~~s~~l~~~~~~~~~f~~~l~l~~----~~~slG~~~sL~~~p~~~~ 386 (433)
T PRK08134 313 HPAVARVAHPELESHPDHALAKRLLPR--GAGSVFSFDLKGGRAAGRKFIESLKLFS----HLANVGDARSLVIHPASTT 386 (433)
T ss_pred CCCccEEECCCCCCCccHHHHHHhCCC--CCceEEEEEecCCHHHHHHHHHhCCcce----eccccCCCCceeeCCCccC
Confidence 986 8999999999999999998742 78999999997 5567889999999743 7999999999999999999
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Q 013079 400 SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDS 445 (450)
Q Consensus 400 ~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~ 445 (450)
|..++++.++.+|+++++||||+| +|+.+++|++|.+||++++..
T Consensus 387 h~~~~~~~~~~~Gi~~~liRlsvG-lE~~~dli~dl~~Al~~~~~~ 431 (433)
T PRK08134 387 HFRMDAAALAAAGIGEGTIRLSIG-LEDADDLIDDLKRALKAAEKA 431 (433)
T ss_pred cccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHHhhhhc
Confidence 999999999999999999999999 999999999999999987643
No 11
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4.5e-58 Score=462.82 Aligned_cols=388 Identities=32% Similarity=0.515 Sum_probs=338.5
Q ss_pred ChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Q 013079 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (450)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~ 118 (450)
++.+.++|.. .....+|++.+|||.++||.+++.+++.+.+... ...|.|+|..+|+.+.|++.||+++|++.++
T Consensus 8 ~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~Le~~lA~leg~~~al 83 (431)
T PRK08248 8 RLETLAIHAGQEIDPTTGSRAVPIYQTTSYGFRDSEHAANLFSLK----EFGNIYTRIMNPTTDVFEKRIAALEGGIGAL 83 (431)
T ss_pred CcchhheeCCcCCCCCCCCccCCeeCCCccccCCHHHHHhhhccc----cCCceeECCCCchHHHHHHHHHHHhCCCcEE
Confidence 4556666643 3334578999999999999999998888776543 2358899999999999999999999999999
Q ss_pred EecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecC
Q 013079 119 CTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESI 198 (450)
Q Consensus 119 ~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~ 198 (450)
+|+| |++|+.+++..++++||+|+++.+.|+++...+...+.+ .|+++++++..|++++++++ ++++++|++++|
T Consensus 84 ~~~s---G~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~-~Gv~v~~vd~~d~e~l~~ai-~~~tklV~l~sp 158 (431)
T PRK08248 84 AVSS---GQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPK-LGITVKFVDPSDPENFEAAI-TDKTKALFAETI 158 (431)
T ss_pred EECC---HHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHh-CCEEEEEECCCCHHHHHHhc-CCCCeEEEEECC
Confidence 9999 999999999999999999999999999888777655555 79999999999999999999 789999999999
Q ss_pred CCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHH--------
Q 013079 199 SNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLV-------- 269 (450)
Q Consensus 199 ~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~-------- 269 (450)
+||||.+.|+++|+++|+++|+++|+|++| .++...+.++|+|++++|+||+++++|+++||+++.+.+..
T Consensus 159 ~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~ 238 (431)
T PRK08248 159 GNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFP 238 (431)
T ss_pred CCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccc
Confidence 999999999999999999999999999999 55666777889999999999999999999988777543210
Q ss_pred ---------------HHH------HHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--e
Q 013079 270 ---------------NSM------MDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--K 326 (450)
Q Consensus 270 ---------------~~l------~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~ 326 (450)
+.+ ...+.......|..+++..|++++++++++..|++++.+++..++++|++++. +
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~ 318 (431)
T PRK08248 239 GLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEW 318 (431)
T ss_pred cccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcce
Confidence 100 01111122367899999999999999999999999999999999999999986 8
Q ss_pred eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCH
Q 013079 327 VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNA 405 (450)
Q Consensus 327 v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~ 405 (450)
|.||+++++|+|+++++++++ |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..+++
T Consensus 319 V~yPgl~s~p~~~~~~~~~~~--g~gg~~sf~l~~~~~~~~~f~~~l~l~~----~~~slG~~~sl~~~p~~~~h~~~~~ 392 (431)
T PRK08248 319 VSYPGLPSHPSYELAKKYLPK--GQGAILTFGIKGGVEAGKKLIDSVKLFS----HLANVGDSKSLIIHPASTTHQQLSE 392 (431)
T ss_pred EECCCCCCCccHHHHHHhCcC--CCceEEEEEecCCHHHHHHHHHhCCcce----eccccCCCCeeeeCCCcCccccCCH
Confidence 999999999999999998853 68999999997 5567889999999743 7999999999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 406 EEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 406 ~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
+++..+|+++++||||+| +|+.+|++++|++||++++
T Consensus 393 ~~~~~~gi~~~liRlsvG-lEd~~dL~~Dl~~Al~~~~ 429 (431)
T PRK08248 393 EEQLAAGVTPGLVRLSVG-TEAIDDILDDLRQAIRQSQ 429 (431)
T ss_pred HHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999 9999999999999999765
No 12
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=1e-57 Score=456.69 Aligned_cols=383 Identities=37% Similarity=0.581 Sum_probs=339.0
Q ss_pred hhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
+.+.++|.. .....+|+++||||.++||.+++.+.+.+.|.+. ...|.|+|+++|++++|+++||+++|.+.+++
T Consensus 4 ~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~ 79 (391)
T TIGR01328 4 FATRAIHAGYPPKDQFGALTPPIYQTSTFVFDSCEQGGNRFAGQ----ESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVA 79 (391)
T ss_pred cccceeeCCccCCCCCCCccCCcccCcceecCChHHHHHhhcCC----cCCCceeCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 445555533 3334578999999999999999988888877543 24689999999999999999999999999999
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
++| |++|+.+++.+++++||+|+++.+.|+++...+...... .|+++.+++.+|++++++++ +++|++|++++|+
T Consensus 80 ~~s---G~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~-~G~~~~~vd~~d~e~l~~~i-~~~tklV~le~p~ 154 (391)
T TIGR01328 80 TSS---GMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTK-FGIQVDFINMAIPEEVKAHI-KDNTKIVYFETPA 154 (391)
T ss_pred ECC---HHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhc-CCeEEEEECCCCHHHHHHhh-ccCCeEEEEECCC
Confidence 999 999999999999999999999999999887777655554 79999999999999999999 8899999999999
Q ss_pred CCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhh
Q 013079 200 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG 278 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~ 278 (450)
||+|.+.|+++|.++|+++|+++|+|++| .++...+...++|++++|++|+++++|+++||++++++++++.++.....
T Consensus 155 Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~ 234 (391)
T TIGR01328 155 NPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIK 234 (391)
T ss_pred CCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 45555677779999999999999999998889999999988887654321
Q ss_pred hhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013079 279 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 356 (450)
Q Consensus 279 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 356 (450)
...|..+++..|++++++++++..|++++.++++.+.++|++++. +|.||+++++|+|++++++++ |+|++++
T Consensus 235 --~~~g~~l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~---~~g~~~s 309 (391)
T TIGR01328 235 --DMTGSVISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMR---MGGGMIT 309 (391)
T ss_pred --hCCCCCCCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCC---CCCceEE
Confidence 134667888888888889999999999999999999999999975 899999999999999999986 7899999
Q ss_pred EEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013079 357 LDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 435 (450)
Q Consensus 357 ~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 435 (450)
|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+...|+++++||||+| +|+.++++++|
T Consensus 310 ~~~~~~~~~~~~f~~~l~~~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl 384 (391)
T TIGR01328 310 FELKGGFAGAKKLLNNLKLIR----LAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVG-LEDADDLIADL 384 (391)
T ss_pred EEeCCCHHHHHHHHHhCCcce----EecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHHH
Confidence 9997 5567889999999743 7999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHh
Q 013079 436 EKALSRM 442 (450)
Q Consensus 436 ~~al~~~ 442 (450)
++||.++
T Consensus 385 ~~al~~~ 391 (391)
T TIGR01328 385 KQALDAL 391 (391)
T ss_pred HHHHhhC
Confidence 9999864
No 13
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=1.3e-57 Score=455.98 Aligned_cols=381 Identities=34% Similarity=0.564 Sum_probs=337.5
Q ss_pred CChhHHHhhcCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Q 013079 39 EDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (450)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~ 118 (450)
+++.+.++|.......++++.+|||.++||.+++.+++...+.+. ...+.|+|+.+|+++++++++|+++|++.++
T Consensus 5 ~~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~la~l~g~~~~v 80 (390)
T PRK08133 5 LGFDTLAVRAGQLRSPFGEHSEALFLTSSFVFESAAEAAARFAGE----EPGNIYSRFTNPTVTMFQERLAALEGAEACV 80 (390)
T ss_pred CCcchhheeCCCCCCCCCCccCCccCCCCcccCCHHHHHHhhcCC----cCCceeECCCChHHHHHHHHHHHHhCCCcEE
Confidence 346666677543334578899999999999999876665555332 2347799999999999999999999999999
Q ss_pred EecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecC
Q 013079 119 CTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESI 198 (450)
Q Consensus 119 ~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~ 198 (450)
+|+| |++|+.+++.+++++||+||++++.|+++...+...... .|+++++++.+|++++++++ +++|++|++++|
T Consensus 81 ~~ss---G~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~~i-~~~tklV~ie~p 155 (390)
T PRK08133 81 ATAS---GMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFAR-FGIETTFVDLTDLDAWRAAV-RPNTKLFFLETP 155 (390)
T ss_pred EECC---HHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHH-cCcEEEEECCCCHHHHHHhc-CcCCeEEEEECC
Confidence 9999 999999999999999999999999999988776555554 79999999999999999999 889999999999
Q ss_pred CCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh
Q 013079 199 SNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ 277 (450)
Q Consensus 199 ~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~ 277 (450)
+||+|.+.|+++|+++|+++|+++|+|++| .+....+...|+|++++|+||+++++|+++||+++.++++++++.....
T Consensus 156 ~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~ 235 (390)
T PRK08133 156 SNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLR 235 (390)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHH
Confidence 999999999999999999999999999998 5555677778999999999999999999998999998888777765444
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
..|..+++..++.++++++++..|++++.+++..+.++|++++. ++.||+++++|+|+++++++. |+|+++
T Consensus 236 ----~~g~~~~~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~---g~g~~~ 308 (390)
T PRK08133 236 ----TAGPTLSPFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQK---GGGAIV 308 (390)
T ss_pred ----HhCCCCCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCC---CCceEE
Confidence 56778888889898899999999999999999999999999975 899999999999999999875 799999
Q ss_pred EEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 356 CLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 356 ~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
+|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .|+.+++|++
T Consensus 309 s~~l~~~~~~~~~f~~~l~l~~----~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~d 383 (390)
T PRK08133 309 SFEVKGGREAAWRVIDATRLIS----ITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVG-LEDVADIKAD 383 (390)
T ss_pred EEEEcCCHHHHHHHHHhCCcce----EeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHH
Confidence 99997 5667889999999743 7999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHH
Q 013079 435 FEKALS 440 (450)
Q Consensus 435 l~~al~ 440 (450)
|++||+
T Consensus 384 l~~al~ 389 (390)
T PRK08133 384 LARGLA 389 (390)
T ss_pred HHHHhh
Confidence 999986
No 14
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1e-57 Score=452.38 Aligned_cols=375 Identities=24% Similarity=0.401 Sum_probs=330.6
Q ss_pred CCChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCe
Q 013079 38 WEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA 116 (450)
Q Consensus 38 ~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~ 116 (450)
.+++.+.++|+. .....+|++.|||+++|||.+++.+++.. . ...|.|+|.++|+++.|++.|+.+++.+.
T Consensus 10 ~~~~~t~~~~~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~----~----~~~y~YsR~gnPt~~~Le~~la~le~~~~ 81 (395)
T PRK05967 10 KAGINTRLAHDGNDPGDYHGFVNPPVVHASTVLFPDAETMAT----R----GQKYTYGTRGTPTTDALCKAIDALEGSAG 81 (395)
T ss_pred cCCcccceeeCCCCCCCCCCCccCCccCCcceecCChHHhhc----c----cCCCccCCCCChHHHHHHHHHHHHhCCCC
Confidence 345667677754 33455799999999999999999876632 1 23589999999999999999999999988
Q ss_pred EEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEe
Q 013079 117 AYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE 196 (450)
Q Consensus 117 ~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~ 196 (450)
.++++| |++|+++++.+++++||+||++++.|+++...+...+++ .|+++++++..+.+++++++ +++|++|+++
T Consensus 82 ~v~~sS---G~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~-~Gi~v~~vd~~~~e~l~~al-~~~TklV~le 156 (395)
T PRK05967 82 TILVPS---GLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKR-LGVEVEYYDPEIGAGIAKLM-RPNTKVVHTE 156 (395)
T ss_pred EEEECc---HHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHh-cCeEEEEeCCCCHHHHHHhc-CcCceEEEEE
Confidence 999999 999999999999999999999999999998877666665 89999999887888899999 8899999999
Q ss_pred cCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHH
Q 013079 197 SISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL 275 (450)
Q Consensus 197 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~ 275 (450)
+|+||++.+.|+++|+++|+++|+++++|++| .++.++|.++|+|++++|++|+++|+++.++|+++.+++.++++...
T Consensus 157 sPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~ 236 (395)
T PRK05967 157 APGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEA 236 (395)
T ss_pred CCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHH
Confidence 99999999999999999999999999999999 77788999999999999999999999999999888888777777655
Q ss_pred hhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCc
Q 013079 276 HQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGG 353 (450)
Q Consensus 276 ~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~ 353 (450)
+. ..|..+++..|++++++++++..|++++.+++..++++|++++. +|.||+++++|+|+++++++. |+|+
T Consensus 237 ~~----~~G~~~~p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~---g~gg 309 (395)
T PRK05967 237 HG----TLGLCAGPDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFS---GASG 309 (395)
T ss_pred HH----HcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCC---CCce
Confidence 44 67899999999999999999999999999999999999999986 899999999999999999886 7999
Q ss_pred EEEEEeC-C----HHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCH
Q 013079 354 LLCLDME-T----EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTL 428 (450)
Q Consensus 354 ~~~~~l~-~----~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~ 428 (450)
+++|+++ + .+.+.+|++.|+... +++|+|+.+|+++++ . ++.+.....|+.+++||||+| .|+.
T Consensus 310 ~~sf~l~~~~~~~~~~~~~f~~~l~l~~----~~~slG~~~sLi~~~-~-----~~~~~~~~~~~~~~liRlSvG-lEd~ 378 (395)
T PRK05967 310 IFSFVLAAGPEKGKAKAHAFLDALEIFG----LGYSWGGYESLALHV-K-----LGDRTVAKAPYAGPVIRLQIG-LEDV 378 (395)
T ss_pred EEEEEEcCCCcccHHHHHHHHHhCCcce----EccCCCCcceeeeeC-C-----CChhHhhhccCCCCeEEEEec-cCCH
Confidence 9999997 3 577889999999743 799999999999873 2 233334345788899999999 9999
Q ss_pred HHHHHHHHHHHHHhh
Q 013079 429 DQRWSQFEKALSRMQ 443 (450)
Q Consensus 429 ~~~i~~l~~al~~~~ 443 (450)
++++++|.+||+++.
T Consensus 379 ~dLi~Dl~~Al~~~~ 393 (395)
T PRK05967 379 PDLKADLERGFAAAS 393 (395)
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999998764
No 15
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-58 Score=439.93 Aligned_cols=383 Identities=38% Similarity=0.540 Sum_probs=341.2
Q ss_pred CChhHHHhhcCCCCCC--CCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCe
Q 013079 39 EDPAAALASARHEFGE--HGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA 116 (450)
Q Consensus 39 ~~~~~~~~~~~~~~~~--~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~ 116 (450)
.++.+++.|....... ++++.|||+.++++.+... +....-+....+|.|+|.++|++..+++.|+++.|++.
T Consensus 20 ~~~~t~~~~~g~~~~~~~~~~v~~pI~~~~s~tfk~~-----~~~~~~~~~~~~~~Ysr~~nPt~~~le~~iaal~ga~~ 94 (409)
T KOG0053|consen 20 SHLDTNLLHAGQDPEKAIHNAVAPPIYATLSTTFKQD-----LNEGEHGGNLDGYDYSRSGNPTRDVLESGIAALEGAAH 94 (409)
T ss_pred cccchhhhhcccccchhccccccCceecccceeeccc-----CccccccccccccccccCCCCchHHHHHHHHHHhCCce
Confidence 4688888885443333 8999999995555444432 11111111122699999999999999999999999999
Q ss_pred EEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEe
Q 013079 117 AYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE 196 (450)
Q Consensus 117 ~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~ 196 (450)
+++++| |+.|+..++..++.+|++|+.....|.++...++.+.++ +|++..+++.+|++++++++ .++|++|++|
T Consensus 95 ~l~fsS---GmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~-~gie~~~vd~~~~~~~~~~i-~~~t~~V~~E 169 (409)
T KOG0053|consen 95 ALLFSS---GMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPK-FGGEGDFVDVDDLKKILKAI-KENTKAVFLE 169 (409)
T ss_pred EEEecc---cHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHH-hCceeeeechhhHHHHHHhh-ccCceEEEEE
Confidence 999999 999999999999999999999999999999999999886 99999999999999999999 7899999999
Q ss_pred cCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcC-HHHHHHHHH
Q 013079 197 SISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMD 274 (450)
Q Consensus 197 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~ 274 (450)
+|.||++.+.||++|+++|+++|+++|||+++ +++.++|+.+|+|+|++|++|+++|+++.|||.++.+ .++.++++.
T Consensus 170 SPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~ 249 (409)
T KOG0053|consen 170 SPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKF 249 (409)
T ss_pred CCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHH
Confidence 99999999999999999999999999999999 6778999999999999999999999999999999886 888999988
Q ss_pred HhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcC
Q 013079 275 LHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFG 352 (450)
Q Consensus 275 ~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g 352 (450)
.+. ..|+.+++..+++..++++++..|++++.+++..++++|++++. ++.||++++||+|++++++.++ ++|
T Consensus 250 ~~~----~lg~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g--~~G 323 (409)
T KOG0053|consen 250 LQE----DLGWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKG--GYG 323 (409)
T ss_pred HHH----HhcCCCCHHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcC--Ccc
Confidence 776 88999999999999999999999999999999999999999987 7999999999999999999885 344
Q ss_pred cEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHH
Q 013079 353 GLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRW 432 (450)
Q Consensus 353 ~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i 432 (450)
+++++.+.+.+.+.+|++.|+... +++|+|+++|++++|+.++|.. +.+++.+.|+++++||||+| .|+.++++
T Consensus 324 ~l~~~~~~~~~~a~kf~~~LK~~~----~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVG-iEd~~dL~ 397 (409)
T KOG0053|consen 324 GLSSVIFGNEEHAKKFYDALKLFT----KAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVG-IEDIEDLI 397 (409)
T ss_pred eEEEEEcCCHHHHHHHHHhhhhhh----cccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEec-cCCHHHHH
Confidence 555555668888999999999743 7999999999999999999999 99999999999999999999 99999999
Q ss_pred HHHHHHHHHhh
Q 013079 433 SQFEKALSRMQ 443 (450)
Q Consensus 433 ~~l~~al~~~~ 443 (450)
.+|.+||+.+.
T Consensus 398 ~d~~~Al~~~~ 408 (409)
T KOG0053|consen 398 KDFQQALEKAK 408 (409)
T ss_pred HHHHHHHHhhc
Confidence 99999998763
No 16
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4.8e-57 Score=454.62 Aligned_cols=390 Identities=29% Similarity=0.460 Sum_probs=339.1
Q ss_pred CChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeE
Q 013079 39 EDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (450)
Q Consensus 39 ~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~ 117 (450)
+++.+.+++.. .....+|++.|||+.|+||.+++.+.+.+.+... .+.|.|+|..+|+++.|++.||+++|++.+
T Consensus 12 ~~~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~----~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~a 87 (436)
T PRK07812 12 WSFETKQIHAGQTPDPATNARALPIYQTTSYTFDDTDHAAALFGLA----EPGNIYTRIMNPTQDVVEQRIAALEGGVAA 87 (436)
T ss_pred CCcchhheeCCCCCCCCCCCccCCCcCCCCcccCCHHHHHHhhcCC----cCCccccCCCCchHHHHHHHHHHHhCCCeE
Confidence 45667677744 3344568999999999999999988777766432 345889999999999999999999999999
Q ss_pred EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC-CCCHHHHHHhhhcCCceEEEEe
Q 013079 118 YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD-ISDHEMVNSAIVQGRTKVLYFE 196 (450)
Q Consensus 118 ~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~-~~d~~~l~~ai~~~~t~lv~i~ 196 (450)
++++| ||+|+.+++.+++++||+|+++...|+++...+...+++ .|+++.+++ ..|++++++++ +++|++|+++
T Consensus 88 v~~sS---G~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~-~Gi~v~~vdd~~d~e~l~~ai-~~~tklV~ie 162 (436)
T PRK07812 88 LLLAS---GQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPK-LGIEVSFVEDPDDLDAWRAAV-RPNTKAFFAE 162 (436)
T ss_pred EEEcc---HHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhc-CeEEEEEECCCCCHHHHHHhC-CCCCeEEEEE
Confidence 99999 999999999999999999999999999988777665665 799999995 56899999999 8899999999
Q ss_pred cCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHH------
Q 013079 197 SISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLV------ 269 (450)
Q Consensus 197 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~------ 269 (450)
+|+||+|.+.|+++|+++|+++|+++|+|+++ .+....+.++|+|+++.|+||++|++|..+||+++.+..+.
T Consensus 163 ~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~ 242 (436)
T PRK07812 163 TISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRF 242 (436)
T ss_pred CCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccc
Confidence 99999999999999999999999999999998 66777888889999999999999999998988877532110
Q ss_pred ----------------H----H-HHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--e
Q 013079 270 ----------------N----S-MMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--K 326 (450)
Q Consensus 270 ----------------~----~-l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~ 326 (450)
+ . +...+.......|..+++..|++++++++++..|++++.+++..++++|++++. +
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~ 322 (436)
T PRK07812 243 PGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVAS 322 (436)
T ss_pred cccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 0 0 001111122367899999999999999999999999999999999999999986 8
Q ss_pred eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCH
Q 013079 327 VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNA 405 (450)
Q Consensus 327 v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~ 405 (450)
|.||+++++|+|++++++++. |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..+++
T Consensus 323 V~yPgl~s~p~~~~~~~~~~~--g~gg~~sf~l~~~~~~~~~f~~~l~l~~----~a~slG~~~sLi~~p~~~~h~~~~~ 396 (436)
T PRK07812 323 VNYAGLPSSPWYERAKRLAPK--GTGAVLSFELAGGVEAGKAFVNALTLHS----HVANIGDVRSLVIHPASTTHSQLTP 396 (436)
T ss_pred EECCCCCCCccHHHHHHhCcC--CCceEEEEEecCCHHHHHHHHHhCCcce----EecccCCCcceeeCCCCCCcccCCH
Confidence 999999999999999998742 78999999997 4566889999999743 7999999999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 406 EEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 406 ~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
++++.+|+++++||||+| +|+.+++|++|.+||++++.
T Consensus 397 ~~~~~~gi~~~liRlSvG-lEd~~dli~dl~~Al~~~~~ 434 (436)
T PRK07812 397 EEQLATGVTPGLVRLAVG-IEGIDDILADLEAGFAAAKA 434 (436)
T ss_pred HHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHHhhhc
Confidence 999999999999999999 99999999999999998764
No 17
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=3.2e-57 Score=454.13 Aligned_cols=386 Identities=32% Similarity=0.505 Sum_probs=341.0
Q ss_pred CCCChhHHHhhcCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCe
Q 013079 37 AWEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA 116 (450)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~ 116 (450)
+.+++.+.++|..+....++++.+|||.++++.+++.+.+...+... ...|.|+|+++|+.++|++.||+++|++.
T Consensus 7 ~~~~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~Le~~lA~l~G~~~ 82 (398)
T PRK07504 7 RKWRPATRLVHSGTLRSQFGETSEALFLTQGFVYDTAEAAEARFKGE----DPGFIYSRYSNPTVDMFEKRMCALEGAED 82 (398)
T ss_pred ccCCcccceeeCCCCCCCCCCCcCCeECCCCccCCCHHHHHHHhccC----cCCceeecCCCchHHHHHHHHHHHhCCCe
Confidence 44566676777543335578899999999999999887776655443 34589999999999999999999999999
Q ss_pred EEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEe
Q 013079 117 AYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE 196 (450)
Q Consensus 117 ~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~ 196 (450)
++++++ |+.|+..++..++++||+|+++.+.|+++...+....++ .|+++++++..|++++++++ +++|++|+++
T Consensus 83 ~~~~~s---G~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~-~G~~v~~vd~~d~e~l~~ai-~~~tklV~le 157 (398)
T PRK07504 83 ARATAS---GMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPR-YGIESTLVDGLDLDNWEKAV-RPNTKVFFLE 157 (398)
T ss_pred eeEecC---HHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhh-cCeEEEEECCCCHHHHHHhc-CcCceEEEEE
Confidence 888999 999999888888999999999999999988776555554 79999999988999999999 8899999999
Q ss_pred cCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHH-HHHH
Q 013079 197 SISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVN-SMMD 274 (450)
Q Consensus 197 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~-~l~~ 274 (450)
+|+||+|.+.|+++|.++|+++|+++|+|++| .++...+..+|+|++++|+||+++++|+++||+++++++++. .++.
T Consensus 158 sp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~ 237 (398)
T PRK07504 158 SPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQD 237 (398)
T ss_pred CCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999999999 455567778899999999999999999999889988877664 3443
Q ss_pred HhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcC
Q 013079 275 LHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFG 352 (450)
Q Consensus 275 ~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g 352 (450)
... ..|..+++..|++++++++++..|++++.+++..+.++|++++. +|.||+++++|+|++++++++ |+|
T Consensus 238 ~~~----~~g~~~s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~---g~g 310 (398)
T PRK07504 238 YFR----HTGPSLSPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMT---GGS 310 (398)
T ss_pred HHH----HhCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCC---CCc
Confidence 333 56788999999999999999999999999999999999999875 899999999999999999986 789
Q ss_pred cEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHH
Q 013079 353 GLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQR 431 (450)
Q Consensus 353 ~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~ 431 (450)
++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|++++|..++++.+...|+++++||||+| .|+.+|+
T Consensus 311 ~~~s~~~~~~~~~~~~~~~~l~~~~----~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl 385 (398)
T PRK07504 311 TLVAFELKGGKEAAFRFLNALKIVR----ISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAG-LEDTDDL 385 (398)
T ss_pred cEEEEEeCCCHHHHHHHHHhCCcce----ecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEec-cCCHHHH
Confidence 99999996 5677889999999743 7999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHhh
Q 013079 432 WSQFEKALSRMQ 443 (450)
Q Consensus 432 i~~l~~al~~~~ 443 (450)
+++|++||++++
T Consensus 386 ~~dl~~al~~~~ 397 (398)
T PRK07504 386 IEDLAAALKKVR 397 (398)
T ss_pred HHHHHHHHHhhh
Confidence 999999998764
No 18
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=6.1e-57 Score=453.97 Aligned_cols=391 Identities=29% Similarity=0.411 Sum_probs=336.8
Q ss_pred CCCCChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCC
Q 013079 36 AAWEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGT 114 (450)
Q Consensus 36 ~~~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~ 114 (450)
.+++++.+.+++.. .....+|+++||||.|+||.+++.+.+...+... ...|.|+|..+|+++.+++++|+++|+
T Consensus 9 ~~~~~~~t~~~~~~~~~~~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~----~~~~~Y~r~~~pt~~~le~~la~l~g~ 84 (437)
T PRK05613 9 ADQWGFETRSIHAGQSVDSDTSARNLPIYQTTSYVFDSAEHAKQRFALE----DLGPIYSRLTNPTVEALENRIASLEGG 84 (437)
T ss_pred cccCCcchHheeCCCCCCCCCCCccCCEeCCCCcccCCHHHHHHhhccc----cCCceeeCccChHHHHHHHHHHHHhCC
Confidence 34456777777754 3344578999999999999999987776655432 235889999999999999999999999
Q ss_pred CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC-CCCHHHHHHhhhcCCceEE
Q 013079 115 EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD-ISDHEMVNSAIVQGRTKVL 193 (450)
Q Consensus 115 ~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~-~~d~~~l~~ai~~~~t~lv 193 (450)
+..++++| |++|+.+++.+++++||+||+++.+|+++...+...+.+ .|+++++++ ..|++++++++ +++|++|
T Consensus 85 ~~~v~fsS---G~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~-~Gi~v~~vd~~~d~e~l~~~l-~~~tk~V 159 (437)
T PRK05613 85 VHAVAFAS---GQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNR-LGIEVTFVENPDDPESWQAAV-QPNTKAF 159 (437)
T ss_pred CeEEEeCC---HHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHh-cCeEEEEECCCCCHHHHHHhC-CccCeEE
Confidence 99999999 999999999988999999999999999997666555555 799999997 45899999999 8899999
Q ss_pred EEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHH---
Q 013079 194 YFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLV--- 269 (450)
Q Consensus 194 ~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~--- 269 (450)
+++++.||+|.++|+++|+++|+++|+++|+|+++ .+..+++.++|+|++++|+||+++++|..+||+++.+..+.
T Consensus 160 ~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~ 239 (437)
T PRK05613 160 FGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTV 239 (437)
T ss_pred EEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccc
Confidence 99999999999999999999999999999999998 55567888889999999999999999988889887532210
Q ss_pred ---------------------------H-H-HHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH
Q 013079 270 ---------------------------N-S-MMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRM 320 (450)
Q Consensus 270 ---------------------------~-~-l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L 320 (450)
. . +...+.......|..+++..|+++.++++++..|++++.+++..++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L 319 (437)
T PRK05613 240 ERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFL 319 (437)
T ss_pred cccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0011111233679999999999999999999999999999999999999
Q ss_pred HhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccccccccccccc
Q 013079 321 KKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGS 397 (450)
Q Consensus 321 ~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~ 397 (450)
+++|. +|.||+++++|+|+++++++.. |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+
T Consensus 320 ~~hp~V~~V~yPgl~~~p~~~~~~~~~~~--g~gg~~sf~l~~~~~~~~~f~~~l~l~~----~~~slG~~~sLv~~p~~ 393 (437)
T PRK05613 320 NNHEKVAKVNFAGLKDSPWYATKEKLGLK--YTGSVLSFDIKGGKDEAWAFIDALKLHS----NLANIGDVRSLVVHPAT 393 (437)
T ss_pred HcCCCcceEECCCCCCCccHHHHHHhcCC--CCceEEEEEecCCHHHHHHHHHhCCcce----EccCCCCCchhhcCCCc
Confidence 99986 8999999999999999998642 68999999997 5677889999999743 79999999999999999
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 398 STSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 398 ~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
++|..++.+.+..+|+++++||||+| +|+.+|+|++|.+||+++
T Consensus 394 ~~h~~~~~~~~~~~Gi~~~liRlsvG-lE~~~dLi~Dl~~Al~~~ 437 (437)
T PRK05613 394 TTHSQSDEAGLARAGITQATVRLSVG-IEDIDDIIADLEGGFAAI 437 (437)
T ss_pred cCCccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999 999999999999999853
No 19
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=8.8e-57 Score=450.92 Aligned_cols=380 Identities=30% Similarity=0.466 Sum_probs=338.0
Q ss_pred CChhHHHhhcCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Q 013079 39 EDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (450)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~ 118 (450)
+++.+.++|.......++++.+||+.++||.+++.+.+.+.+.+. ...|.|+|+++|++++|+++||+++|.+.++
T Consensus 14 ~~~~t~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~----~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al 89 (403)
T PRK07810 14 VSQATIGVRGGLLRSGFEETAEALYLTSGYVYESAAAAEAAFTGE----LDRFVYSRYGNPTVSMFEERLRLIEGAEACF 89 (403)
T ss_pred CCcchhheeCCCCCCCCCCccCCccCCCccccCCHHHHHHHhccC----cCCcceeCCCCchHHHHHHHHHHHhCCCcEE
Confidence 567777777543234578999999999999999988877776543 2358899999999999999999999999999
Q ss_pred EecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecC
Q 013079 119 CTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESI 198 (450)
Q Consensus 119 ~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~ 198 (450)
+++| |+.|+..++.+++++||+|+++...|+++...+...+.+ .|+++++++..|++++++++ +++|++|++++|
T Consensus 90 ~~~s---G~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~ai-~~~tklV~~esp 164 (403)
T PRK07810 90 ATAS---GMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPR-WGVETVFVDGEDLSQWEEAL-SVPTQAVFFETP 164 (403)
T ss_pred EECC---hHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHH-cCcEEEEECCCCHHHHHHhc-CcCceEEEEECC
Confidence 9999 999999999999999999999998888877666555554 79999999999999999999 889999999999
Q ss_pred CCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHH-HHHHHh
Q 013079 199 SNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVN-SMMDLH 276 (450)
Q Consensus 199 ~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~-~l~~~~ 276 (450)
+||+|.+.|+++|+++|+++|+++|+|++| .+....+.++|+|++++|++|+++++|+++||+++++++.+. .++...
T Consensus 165 ~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~ 244 (403)
T PRK07810 165 SNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLM 244 (403)
T ss_pred CCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHH
Confidence 999999999999999999999999999999 556667788899999999999999999999999998876554 455443
Q ss_pred hhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 277 QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 277 ~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
. ..|..+++..+++++++++++..|++++.+++.++.++|++++. +|.||+++++|+|++++++++ |+|++
T Consensus 245 ~----~~g~~~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~---g~g~~ 317 (403)
T PRK07810 245 R----HTGPALSAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMS---GGGTV 317 (403)
T ss_pred H----HhCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCC---CCceE
Confidence 3 56778899999999999999999999999999999999999986 899999999999999999986 78999
Q ss_pred EEEEeCC-----HHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHH
Q 013079 355 LCLDMET-----EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLD 429 (450)
Q Consensus 355 ~~~~l~~-----~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~ 429 (450)
++|++++ .+.+.+|++.|+... +++|+|+.+|++.+|++++|..++.+.+...|+++++||||+| +|+.+
T Consensus 318 ~s~~l~~~~~~~~~~~~~f~~~l~l~~----~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svG-lE~~~ 392 (403)
T PRK07810 318 VTFELDAPEDAAKKRAFEVLDKLRVID----ISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVG-LEDTD 392 (403)
T ss_pred EEEEEcCCCCcCHHHHHHHHHhCCceE----EeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEec-cCCHH
Confidence 9999974 566789999998743 7999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHH
Q 013079 430 QRWSQFEKAL 439 (450)
Q Consensus 430 ~~i~~l~~al 439 (450)
++|++|.+||
T Consensus 393 dli~dl~~Al 402 (403)
T PRK07810 393 DLIADLDRAL 402 (403)
T ss_pred HHHHHHHHhh
Confidence 9999999987
No 20
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=6e-57 Score=449.67 Aligned_cols=374 Identities=30% Similarity=0.432 Sum_probs=330.1
Q ss_pred hhHHHhh-cCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 41 PAAALAS-ARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 41 ~~~~~~~-~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
+.+.++| +......+|+++|||+.++||.+++.+. ...|.|+|+++|+.+.|+++||+++|.+.+++
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~------------~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~ 72 (386)
T PRK08045 5 QATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNE------------PRAHDYSRRGNPTRDVVQRALAELEGGAGAVL 72 (386)
T ss_pred cccceeEcCCCCCCCCCCccCCccCCcceecCCccc------------cCCceeeCCCCccHHHHHHHHHHHhCCCeEEE
Confidence 3344455 4333345689999999999999987431 12488999999999999999999999989999
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
|+| |++|+.+++.+++++||+|+++.+.|+++...+...... .++++.+++..|++++++++ +++|++|++++|+
T Consensus 73 ~~s---g~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~-~gi~v~~vd~~d~e~l~~~l-~~~tklV~l~sP~ 147 (386)
T PRK08045 73 TNT---GMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKR-GCYRVLFVDQGDEQALRAAL-AEKPKLVLVESPS 147 (386)
T ss_pred ECC---HHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh-CCeEEEEeCCCCHHHHHHhc-ccCCeEEEEECCC
Confidence 999 999999999999999999999999999877776655544 56788888877999999999 7899999999999
Q ss_pred CCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhh
Q 013079 200 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQ 277 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~ 277 (450)
||||.+.|+++|.++|+++|+++++|++| .+....+..+++|++++|+||+++++++.++|+++. ++++++.+...+.
T Consensus 148 NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~ 227 (386)
T PRK08045 148 NPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWAN 227 (386)
T ss_pred CCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999 555567788899999999999999888777788865 5777777765555
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
..|..+++..+++++++++++..|++++.+++..++++|++++. +|.||+++++|+|++++++++ |+|+++
T Consensus 228 ----~~g~~~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~---g~g~~~ 300 (386)
T PRK08045 228 ----NIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQK---GFGAML 300 (386)
T ss_pred ----hcCCCCCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCC---CCCceE
Confidence 66888999999999999999999999999999999999999986 899999999999999999875 799999
Q ss_pred EEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 356 CLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 356 ~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
+|+++ +.+.+.+|++.|+... +++|+|+.+|++++|++++|..++++.+..+|+++++||||+| .|+.+|++++
T Consensus 301 s~~~~~~~~~~~~f~~~l~~~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~d 375 (386)
T PRK08045 301 SFELDGDEQTLRRFLGGLSLFT----LAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG-IEDGEDLIAD 375 (386)
T ss_pred EEEecCcHHHHHHHHHhcccee----EeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHH
Confidence 99997 4566789999999743 7999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHhh
Q 013079 435 FEKALSRMQ 443 (450)
Q Consensus 435 l~~al~~~~ 443 (450)
|++||+++.
T Consensus 376 l~~al~~~~ 384 (386)
T PRK08045 376 LENGFRAAN 384 (386)
T ss_pred HHHHHHHhh
Confidence 999999875
No 21
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=9.1e-57 Score=449.57 Aligned_cols=371 Identities=30% Similarity=0.530 Sum_probs=328.0
Q ss_pred CCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHH
Q 013079 53 GEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISS 132 (450)
Q Consensus 53 ~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~ 132 (450)
..+|+++|||+.++||.+++.+++.+.+... ...|.|+|.++|+++.|+++||+++|++.++++++ |++|+..
T Consensus 5 ~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~----~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ss---G~~Ai~~ 77 (397)
T PRK05939 5 IEHGAVHKPIHTSVTYGYEDARDLIDVFQGK----KPGFTYARQGTPTTAALEAKITKMEGGVGTVCFAT---GMAAIAA 77 (397)
T ss_pred CCCCCccCCccCCCCeecCCHHHHHHhhcCC----cCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCC---HHHHHHH
Confidence 4568999999999999999988888877653 23589999999999999999999999999999999 9999999
Q ss_pred HHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHH
Q 013079 133 VLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELS 212 (450)
Q Consensus 133 al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~ 212 (450)
++.+++++||+|+++++.|+++...+.. +.+ .|+++++++..|++++++++ +++|++|++++|+||+|.+.|+++|+
T Consensus 78 ~l~all~~Gd~Vv~~~~~y~~t~~~~~~-l~~-~G~~v~~v~~~d~e~l~~~l-~~~tklV~vesp~NptG~v~dl~~I~ 154 (397)
T PRK05939 78 VFLTLLRAGDHLVSSQFLFGNTNSLFGT-LRG-LGVEVTMVDATDVQNVAAAI-RPNTRMVFVETIANPGTQVADLAGIG 154 (397)
T ss_pred HHHHHcCCCCEEEECCCccccHHHHHHH-HHh-cCCEEEEECCCCHHHHHHhC-CCCCeEEEEECCCCCCCCHHhHHHHH
Confidence 9999999999999999999987766643 344 79999999999999999999 88999999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHH--------HHHH----------HH
Q 013079 213 RLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAN--------LVNS----------MM 273 (450)
Q Consensus 213 ~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~--------~~~~----------l~ 273 (450)
++|+++|+++|+|++| .+..+++..+|+|++++|+||+++++|+++||+++.+.. +... +.
T Consensus 155 ~la~~~gi~livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (397)
T PRK05939 155 ALCRERGLLYVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLT 234 (397)
T ss_pred HHHHHcCCEEEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHH
Confidence 9999999999999999 666778888899999999999999999999777664321 1111 11
Q ss_pred HHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCc
Q 013079 274 DLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGF 351 (450)
Q Consensus 274 ~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~ 351 (450)
..+.......|..+++..++++.++++++..|++++.+++..++++|+++|. +|.||+++++|+|+++++++. |+
T Consensus 235 ~~~~~~~~~~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~---g~ 311 (397)
T PRK05939 235 QIRKKGLRDMGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFR---HY 311 (397)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhcc---CC
Confidence 2222222367889999999999999999999999999999999999999986 899999999999999999985 79
Q ss_pred CcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHH
Q 013079 352 GGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQR 431 (450)
Q Consensus 352 g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~ 431 (450)
|++++|++++.+.+.+|++.++... +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .||++|+
T Consensus 312 g~l~sf~~~~~~~~~~f~~~l~l~~----~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svG-lEd~~dL 386 (397)
T PRK05939 312 GGLLSFELADGIDCFDFLNRLKLVI----KATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVG-IEDEADL 386 (397)
T ss_pred ceEEEEEeCCHHHHHHHHHhCCcce----EccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeC-CCCHHHH
Confidence 9999999986667889999998633 7999999999999999999999999999899999999999999 9999999
Q ss_pred HHHHHHHHHH
Q 013079 432 WSQFEKALSR 441 (450)
Q Consensus 432 i~~l~~al~~ 441 (450)
+++|.+||++
T Consensus 387 i~dl~~Al~~ 396 (397)
T PRK05939 387 IADFEQALDA 396 (397)
T ss_pred HHHHHHHHhc
Confidence 9999999974
No 22
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=9.4e-57 Score=452.91 Aligned_cols=386 Identities=31% Similarity=0.468 Sum_probs=334.5
Q ss_pred hHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEe
Q 013079 42 AAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCT 120 (450)
Q Consensus 42 ~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~t 120 (450)
.+.+++.. .....+++++|||+.++||.+++.+++.+.+.+. ...|.|+|..+|+.++|++.||+++|.+.++++
T Consensus 4 ~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~----~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~ 79 (425)
T PRK06084 4 ETLAIHAGYSPDPTTKAVAVPIYQTTSYAFDDTQHGADLFDLK----VPGNIYTRIMNPTNDVLEQRVAALEGGVGALAV 79 (425)
T ss_pred chhheeCCcCCCCCCCCccCCEeCCCCcccCCHHHHHHhhccc----cCCccccCCCCchHHHHHHHHHHHhCCCceeEe
Confidence 34455533 3334568999999999999999988888776543 235899999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCC
Q 013079 121 ASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 200 (450)
Q Consensus 121 sg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~N 200 (450)
+| |++|+.+++.+++++||+|+++.+.|+++...+...++. .|+++.+++..|++++++++ +++|++|++++|+|
T Consensus 80 ss---G~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~-~gi~v~~~d~~d~e~le~ai-~~~tklV~lesp~N 154 (425)
T PRK06084 80 AS---GMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPR-IGIETRFAAHDDIAALEALI-DERTKAVFCESIGN 154 (425)
T ss_pred hh---HHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhccc-ceeEEEEECCCCHHHHHHHh-ccCCcEEEEeCCCC
Confidence 99 999999999999999999999999999888777666654 78999999988999999999 78899999999999
Q ss_pred CcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHH--HH-------
Q 013079 201 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANL--VN------- 270 (450)
Q Consensus 201 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~--~~------- 270 (450)
|+|.+.|+++|.++|+++|+++|+|++| .++...+..+|+|++++|+||+++++|+++||+++.+... ..
T Consensus 155 PtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~ 234 (425)
T PRK06084 155 PAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFAL 234 (425)
T ss_pred CCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccc
Confidence 9999999999999999999999999999 6666778888999999999999999999998888753221 00
Q ss_pred ---------------------HHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--ee
Q 013079 271 ---------------------SMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KV 327 (450)
Q Consensus 271 ---------------------~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v 327 (450)
.+...+.......|..+++..|++++++++++..|++++.+++..++++|++++. +|
T Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V 314 (425)
T PRK06084 235 LNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWV 314 (425)
T ss_pred cccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0001111112356888999999999999999999999999999999999999986 89
Q ss_pred eCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHH
Q 013079 328 LYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAE 406 (450)
Q Consensus 328 ~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~ 406 (450)
.||+++++|+|.++++++.+ |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++
T Consensus 315 ~yP~l~~~p~~~~~~~~~~g--~~gg~~s~~~~~~~~~~~~f~~~l~l~~----~~~slG~~~slv~~p~~~~h~~~~~~ 388 (425)
T PRK06084 315 KYAGLPDHPEHELARRYMGG--KPASILSFGIKGGQAAGARFIDALKLVV----RLVNIGDAKSLACHPASTTHRQLNDE 388 (425)
T ss_pred ECCCCCCcccHHHHHHhCCC--CcceEEEEEecCCHHHHHHHHHhCCcce----eccccCCCceeeeCCCcCCcccCCHH
Confidence 99999999999999998862 37999999997 5556789999999743 79999999999999999999999999
Q ss_pred HHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 407 EKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 407 ~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
.+..+|+++++||||+| +||.+++|++|.+||++.+
T Consensus 389 ~~~~~gi~~~liR~svG-lEd~~dLi~dl~~Al~~~~ 424 (425)
T PRK06084 389 ELEKAGVSRDMVRLSIG-IEHIDDIIADLAQALDASK 424 (425)
T ss_pred HHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHHhhh
Confidence 99999999999999999 9999999999999998764
No 23
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=1.3e-56 Score=452.58 Aligned_cols=391 Identities=26% Similarity=0.404 Sum_probs=338.0
Q ss_pred ccCCCCChhHHHhhcCC-CCCCCCcccccccccCccccCCHHHHHHhhcCCCCC------CCCCccccCCCChhHHHHHH
Q 013079 34 TAAAWEDPAAALASARH-EFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGP------DRDFFIYSRHFNPTVLNLSR 106 (450)
Q Consensus 34 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n------~~~~~~y~r~~~~~~~~l~~ 106 (450)
.|.+++++.+++++..+ ....+|+++||||.+|||.+++.+++.+++....++ ....|.|+|+++|+...|++
T Consensus 11 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~ 90 (427)
T PRK07049 11 IGNRELHPETQMLNYGYDPELSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVED 90 (427)
T ss_pred cCCCcCCcccceeeCCCCCCCCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHH
Confidence 34555667777777442 333468999999999999999998888876543221 12358899999999999999
Q ss_pred HHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCee-EEEeCCCCHHHHHHhh
Q 013079 107 QMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT-TTFVDISDHEMVNSAI 185 (450)
Q Consensus 107 ~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~-v~~v~~~d~~~l~~ai 185 (450)
.||+++|.+.+++++| |++|+.+++.+++++||+|+++.|.|+++...+...+.. .|++ +.+.+..|++++++++
T Consensus 91 ~lA~leg~~~~iv~~s---G~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~-~Gi~~v~~~~~~d~~~l~~~l 166 (427)
T PRK07049 91 RLAVYEGAESAALFSS---GMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRN-FGVGAVGFADGLSEAAIGAAA 166 (427)
T ss_pred HHHHHhCCCcEEEEcc---HHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHh-cCcEEEEEeCCCCHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999998876554444 6887 4444455788887766
Q ss_pred h----cCCceEEEEecCCCCcccccCHHHHHHHHHh------cCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCcccc-
Q 013079 186 V----QGRTKVLYFESISNPTLAVANIPELSRLAHD------KGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISG- 253 (450)
Q Consensus 186 ~----~~~t~lv~i~~~~NptG~v~~l~~I~~la~~------~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~- 253 (450)
. ++++++|++++|+||||.+.|+++|.++++. +++++|+|++| +++...+...++|++++|+||++++
T Consensus 167 ~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~ 246 (427)
T PRK07049 167 EAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGH 246 (427)
T ss_pred HhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCC
Confidence 2 2579999999999999999999999999987 79999999998 6666777788999999999999996
Q ss_pred CccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCC
Q 013079 254 GADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPG 331 (450)
Q Consensus 254 ~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~ 331 (450)
+|.|+ ||+++++++++.+...+. ..|..+++..++++.+.++++..|++++.++++.+.++|++++. +|.||+
T Consensus 247 ~glr~-G~vv~~~~l~~~l~~~~~----~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~ 321 (427)
T PRK07049 247 SDLVA-GAVLGRKALIRQVRALRS----AIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLP 321 (427)
T ss_pred CCcEE-EEEECCHHHHHHHHHHHH----hcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 67775 999999999888887666 56888899999999999999999999999999999999999975 899998
Q ss_pred C--CCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHH
Q 013079 332 L--EDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEK 408 (450)
Q Consensus 332 ~--~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~ 408 (450)
+ +++|+|++++++++ |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++.+.+
T Consensus 322 ~l~~~~~~~~~~~~~~~---g~g~~~s~~~~~~~~~~~~f~~~l~l~~----~~~slG~~~sli~~~~~~~h~~~~~~~~ 394 (427)
T PRK07049 322 FLDPDSAYGAVYKRQCT---GAGSTFSFDIKGGQAAAFRFLNALQIFK----LAVSLGGTESLASHPASMTHSGVPADVR 394 (427)
T ss_pred CCCCCCccHHHHHhhCC---CCccEEEEEEcCCHHHHHHHHHcCcccE----EcccCCCCCceeeCCCccccccCCHHHH
Confidence 5 99999999999885 79999999997 5567889999999743 7999999999999999999999999999
Q ss_pred HhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 409 ALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 409 ~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
..+|+++++||||+| +|+.+|+|++|.+||++
T Consensus 395 ~~~gi~~~liR~svG-lE~~~dl~~dl~~al~~ 426 (427)
T PRK07049 395 ERIGVLESTIRLSIG-IEHPDDLIADLAQALDA 426 (427)
T ss_pred HhcCCCcCeEEEEeC-cCCHHHHHHHHHHHHhc
Confidence 999999999999999 99999999999999974
No 24
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=4.1e-56 Score=443.88 Aligned_cols=376 Identities=29% Similarity=0.472 Sum_probs=328.4
Q ss_pred hHHHhhcCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEec
Q 013079 42 AAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTA 121 (450)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ts 121 (450)
.+.++++......+++++||||.++||.+++.+. +.+. ...|.|+|..+|+++++++.+|+++|++.+++++
T Consensus 4 ~t~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~----~~~~----~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~ 75 (385)
T PRK08574 4 GTDAVRGYRGSDPYGSLQPPIYLTALFRQEGEAY----PSDR----GFDLKYSREENPTLRPLEEALAKLEGGVDALAFN 75 (385)
T ss_pred cceeeecCCCCCCCCCccCCccCCcceecCcchh----hcCC----cCCceEECCCCccHHHHHHHHHHHhCCCcEEEeC
Confidence 3444453333344689999999999998876522 2221 2358999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcC-CceEEEEecCCC
Q 013079 122 SDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQG-RTKVLYFESISN 200 (450)
Q Consensus 122 g~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~-~t~lv~i~~~~N 200 (450)
| |++|+.+++.+++++||+|+++.+.|+++...+... .. .|+++.+++. |++++++++ ++ +|++|++++|+|
T Consensus 76 s---G~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~-~~-~g~~v~~~~~-d~~~l~~~i-~~~~tklV~ie~p~N 148 (385)
T PRK08574 76 S---GMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSL-EK-FGVKVVLAYP-STEDIIEAI-KEGRTKLVFIETMTN 148 (385)
T ss_pred C---HHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHh-hc-cCcEEEEECC-CHHHHHHhc-CccCceEEEEECCCC
Confidence 9 999999999999999999999999999998877543 43 7889888764 689999999 66 899999999999
Q ss_pred CcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEE-EcCHHHHHHHHHHhhh
Q 013079 201 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAV-CGPANLVNSMMDLHQG 278 (450)
Q Consensus 201 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l-~~~~~~~~~l~~~~~~ 278 (450)
|+|.+.|+++|+++|+++|+++|+|++| .++.+.+...|+|++++|+||+++++|+++||++ +.++++++.++..+.
T Consensus 149 PtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~- 227 (385)
T PRK08574 149 PTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRR- 227 (385)
T ss_pred CCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHH-
Confidence 9999999999999999999999999999 6666778888999999999999999998888855 557788888876665
Q ss_pred hhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013079 279 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 356 (450)
Q Consensus 279 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 356 (450)
..|..+++..+++++++++++..|++++.+++.++.++|++++. +|.||+++++|+|+++++++++ .|+|++++
T Consensus 228 ---~~g~~~~p~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~-~g~g~~~s 303 (385)
T PRK08574 228 ---RLGTIMQPFEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGK-DLYGGVVS 303 (385)
T ss_pred ---hcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCC-CCcceEEE
Confidence 56778888999999999999999999999999999999999986 8999999999999999998842 26899999
Q ss_pred EEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013079 357 LDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 435 (450)
Q Consensus 357 ~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 435 (450)
|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .|+.+++|++|
T Consensus 304 ~~l~~~~~~~~~~~~~l~l~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dli~dl 378 (385)
T PRK08574 304 FRVKGGRDAVLKFLRSLKLIK----PSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVG-LEDVEDLIEDL 378 (385)
T ss_pred EEeCCCHHHHHHHHHcCCcce----EccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHH
Confidence 9997 5677899999999743 7999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHh
Q 013079 436 EKALSRM 442 (450)
Q Consensus 436 ~~al~~~ 442 (450)
++||+++
T Consensus 379 ~~al~~~ 385 (385)
T PRK08574 379 DQALGSI 385 (385)
T ss_pred HHHHhcC
Confidence 9999764
No 25
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=9.1e-56 Score=444.27 Aligned_cols=386 Identities=36% Similarity=0.520 Sum_probs=338.7
Q ss_pred ChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Q 013079 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (450)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~ 118 (450)
++.+.++|.. .....+|++.|||+.|+||.+++.+++.+.+.+. ...|.|+|+.+|.++++++.||+++|++.++
T Consensus 9 ~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i 84 (403)
T PRK07503 9 GFSTRAIHHGYDPLDHGGALVPPVYLTATFAFPTAEYGAECFAGE----EEGHFYSRISNPTLALLEQRMASLEGGEAAV 84 (403)
T ss_pred CccchheeCCCCCCCCCCCccCCcccCcceecCChHHHHHhhccc----cCCceeeCCCCchHHHHHHHHHHHhCCCcEE
Confidence 3555556643 3345578999999999999999998888877543 3468999999999999999999999999899
Q ss_pred EecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecC
Q 013079 119 CTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESI 198 (450)
Q Consensus 119 ~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~ 198 (450)
+++| |+.|+.+++.+++++||+|+++.+.|.++...+...... .|+++++++.+|++++++++ +++|++|++++|
T Consensus 85 ~~~s---G~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~~i-~~~tklV~le~p 159 (403)
T PRK07503 85 ALAS---GMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGE-FGVTVRHVDLTDPAALKAAI-SDKTRMVYFETP 159 (403)
T ss_pred EEcC---HHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhh-CCEEEEEeCCCCHHHHHHhc-CccCcEEEEeCC
Confidence 9999 999999999988999999999999998777666544554 79999999999999999999 789999999999
Q ss_pred CCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh
Q 013079 199 SNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ 277 (450)
Q Consensus 199 ~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~ 277 (450)
+||+|.+.|+++|.++|+++|+++|+|++| .++...+..+++|++++|+||+++++|+.+||+++.+++++++++....
T Consensus 160 ~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~ 239 (403)
T PRK07503 160 ANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGL 239 (403)
T ss_pred CCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhH
Confidence 999999999999999999999999999999 4455566677999999999999999887778999988888888764311
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
. ...|..+++..+++++++++++..|++++.+++..+.++|++++. +|.+|+++++|+|++++++++ |+|+++
T Consensus 240 ~--~~~g~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~---~~g~~~ 314 (403)
T PRK07503 240 K--DMTGAVMSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMA---LPGGMI 314 (403)
T ss_pred H--hCcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCC---CCCceE
Confidence 1 145778889999999999999999999999999999999999985 789999999999999999876 789999
Q ss_pred EEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 356 CLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 356 ~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
+|.++ +.+.+.+|++.++... +++|+|+++|++++|.+++|..++++++..+|+++++||||+| +|+.+|+|++
T Consensus 315 s~~~~~~~~~~~~~~~~l~l~~----~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~d 389 (403)
T PRK07503 315 AFELKGGIAAGRRFMNALQLFA----RAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVG-LEDVADILAD 389 (403)
T ss_pred EEEECCCHHHHHHHHHhCCcce----eecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEe-cCCHHHHHHH
Confidence 99997 5666789999998633 6899999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHhhh
Q 013079 435 FEKALSRMQD 444 (450)
Q Consensus 435 l~~al~~~~~ 444 (450)
|.+||+++..
T Consensus 390 l~~Al~~~~~ 399 (403)
T PRK07503 390 LAQALDACAV 399 (403)
T ss_pred HHHHHHHHHH
Confidence 9999997753
No 26
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=3.7e-56 Score=444.71 Aligned_cols=366 Identities=35% Similarity=0.568 Sum_probs=329.8
Q ss_pred CCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHH
Q 013079 53 GEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISS 132 (450)
Q Consensus 53 ~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~ 132 (450)
..++++.+|||.++||.+++.+++...+.+. ...|.|+|+.+|..+++++.||+++|++.+++++| |++|+.+
T Consensus 12 ~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~s---G~~Ai~~ 84 (380)
T TIGR01325 12 TEFREHAEALFLTSSFVYDSAAHAADRFAGE----IPGFVYSRYANPTVAAFEERIAALEGAERAVATAT---GMSAIQA 84 (380)
T ss_pred CCCCCccCCeeCCcceecCCHHHHHHhhccc----cCCcceecCCCchHHHHHHHHHHHhCCCcEEEECC---HHHHHHH
Confidence 4568899999999999999877666665443 23588999999999999999999999999999999 9999999
Q ss_pred HHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHH
Q 013079 133 VLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELS 212 (450)
Q Consensus 133 al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~ 212 (450)
++.+++++||+|+++.+.|++....+.....+ .|+++.+++.+|++++++++ ++++++|++++|+||+|.+.|+++|.
T Consensus 85 al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~-~g~~v~~v~~~d~~~l~~~i-~~~tklV~le~p~np~g~~~dl~~I~ 162 (380)
T TIGR01325 85 ALMTLLQAGDHVVASRSLFGSTVGFISEILPR-FGIEVSFVDPTDLNAWEAAV-KPNTKLVFVETPSNPLGELVDIAALA 162 (380)
T ss_pred HHHHHhCCCCEEEEecCCcchHHHHHHHHHHH-hCCEEEEECCCCHHHHHHhc-CCCceEEEEECCCCCCCeeeCHHHHH
Confidence 99999999999999999998877666555554 79999999998999999999 78999999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHH
Q 013079 213 RLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKV 291 (450)
Q Consensus 213 ~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~ 291 (450)
++|+++|+++|+|++| .++...+.++|+|++++|+||+++++|+++||++++++++++.++.... ..|..+++..
T Consensus 163 ~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~----~~g~~~~p~~ 238 (380)
T TIGR01325 163 ELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLR----HTGPAMSPFN 238 (380)
T ss_pred HHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHH----hhCCCCCHHH
Confidence 9999999999999999 4556677788999999999999999999888999999888888776554 5677788888
Q ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHH
Q 013079 292 AFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLM 369 (450)
Q Consensus 292 a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~ 369 (450)
++.++++++++..|++++.+++..+.++|+++|. +|.||+++++|+|+++++++. |+|++++|++++.+.+.+|+
T Consensus 239 a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~---g~g~~~s~~l~~~~~~~~f~ 315 (380)
T TIGR01325 239 AWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQS---GGGTVIGFDVADRAAAWKVL 315 (380)
T ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCC---CCceEEEEEECCHHHHHHHH
Confidence 8889999999999999999999999999999975 899999999999999999885 78999999998777789999
Q ss_pred HHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013079 370 NYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 370 ~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 439 (450)
+.|+... +++|+|+.+|++.+|.+++|..++++.+...|+++++||||+| .|+.++++++|++||
T Consensus 316 ~~l~~~~----~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl~~al 380 (380)
T TIGR01325 316 DAVELVS----ITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVG-LEDVDDLIADLKRAL 380 (380)
T ss_pred HcCCcce----EcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHhhC
Confidence 9999743 7999999999999999999999999999999999999999999 999999999999985
No 27
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.5e-55 Score=442.64 Aligned_cols=388 Identities=39% Similarity=0.546 Sum_probs=341.4
Q ss_pred CCCCChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCC
Q 013079 36 AAWEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGT 114 (450)
Q Consensus 36 ~~~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~ 114 (450)
++++++.+.+++.. .....++++.+|++.++|+.++..+++...+... ..+|.|+|+++|...+|++.||+++|.
T Consensus 4 ~~~~~~~t~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~r~~~p~~~~Le~~iA~~~g~ 79 (400)
T PRK06234 4 IKKMGFATKAIHGGHIGDKQFGSLATPIYQTSTFIFDSAEQGGRRFAGE----ESGYIYSRLGNPTSTEVENKLALLEGG 79 (400)
T ss_pred cccCCccchheECCCCCCCCCCCccCCcccccceecCChHHHHHhhccC----cCCCcccCCCCccHHHHHHHHHHHhCC
Confidence 45566666666643 3344578999999999999999987777666442 235779999999999999999999999
Q ss_pred CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEE
Q 013079 115 EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLY 194 (450)
Q Consensus 115 ~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~ 194 (450)
+.+++++| |++|+.+++.+++++||+|+++.+.|+.+...+...+.. .|+++++++..|++++++++ +++|++|+
T Consensus 80 ~~~l~~~s---G~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~-~G~~v~~vd~~d~e~l~~~i-~~~tklI~ 154 (400)
T PRK06234 80 EAAVVAAS---GMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTR-YGVEVTFVDTSNLEEVRNAL-KANTKVVY 154 (400)
T ss_pred CcEEEEcC---HHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhh-CCeEEEEECCCCHHHHHHHh-ccCCeEEE
Confidence 99999999 999999999999999999999999999888776555554 79999999999999999999 88999999
Q ss_pred EecCCCCcccccCHHHHHHHHHhc--CCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHH
Q 013079 195 FESISNPTLAVANIPELSRLAHDK--GVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNS 271 (450)
Q Consensus 195 i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~ 271 (450)
+++|+||||.+.|+++|.++|+++ |+++++|++| .+....+...++|++++|+||+++++|+++||++++++++++.
T Consensus 155 iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~ 234 (400)
T PRK06234 155 LETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQ 234 (400)
T ss_pred EECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHHHHHH
Confidence 999999999999999999999997 9999999999 4444566777899999999999999999888999999888887
Q ss_pred HHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCC
Q 013079 272 MMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEY 349 (450)
Q Consensus 272 l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~ 349 (450)
++..... ...|..+++..+++..++++++..|++++.+++.++.++|++++. +|.+|+++++|+|++++++++
T Consensus 235 l~~~~~~--~~~g~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~--- 309 (400)
T PRK06234 235 VKLFGIK--DMTGSVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMS--- 309 (400)
T ss_pred HHHHHHH--HhcCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCC---
Confidence 7643211 145778889999999999999999999999999999999999886 899999999999999999886
Q ss_pred CcCcEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCH
Q 013079 350 GFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTL 428 (450)
Q Consensus 350 g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~ 428 (450)
|+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+...|+++++||||+| .|+.
T Consensus 310 ~~g~l~s~~l~~~~~~~~~f~~~l~~~~----~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG-lE~~ 384 (400)
T PRK06234 310 LPGAMISFELKGGVEEGKVVMNNVKLAT----LAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVG-LEDV 384 (400)
T ss_pred CCCceEEEEecCcHHHHHHHHHhCCcce----EeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeC-CCCH
Confidence 78999999997 5566889999999743 8999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHh
Q 013079 429 DQRWSQFEKALSRM 442 (450)
Q Consensus 429 ~~~i~~l~~al~~~ 442 (450)
+|++++|.+||+++
T Consensus 385 ~dl~~dl~~al~~~ 398 (400)
T PRK06234 385 DDIIADLKQALDLI 398 (400)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 28
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=1.3e-55 Score=439.42 Aligned_cols=372 Identities=33% Similarity=0.537 Sum_probs=327.7
Q ss_pred hhHHHhh-cCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 41 PAAALAS-ARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 41 ~~~~~~~-~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
+.+.+++ +......+|+++|||+.++||.+++.. . ...|.|+|+++|++..|++++|+++|++.+++
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~-----------~-~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~ 70 (380)
T PRK06176 3 MQTKLIHGGISEDTTTGAVSVPIYQTSTYRQDAIG-----------R-PKGYEYSRSGNPTRFALEELIADLEGGVKGFA 70 (380)
T ss_pred ccceeeECCCCCCCCCCCccCCcccCCceecCCCC-----------C-cCCCcccCCCChhHHHHHHHHHHHhCCCCEEE
Confidence 4444455 322234468999999999999888721 1 23589999999999999999999999999999
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
++| ||.|+.+++ .++++||+|+++++.|++....+.....+ .|+++++++..|++++++++ +++|++|++++|+
T Consensus 71 ~~S---G~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~-~gi~v~~vd~~d~e~l~~ai-~~~t~lV~lesP~ 144 (380)
T PRK06176 71 FAS---GLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVK-NGLSCTIIDTSDLSQIKKAI-KPNTKALYLETPS 144 (380)
T ss_pred ECC---HHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHh-cCeEEEEcCCCCHHHHHHhc-CcCceEEEEECCC
Confidence 999 999998766 56799999999999999988777665555 79999999999999999999 8899999999999
Q ss_pred CCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhh
Q 013079 200 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQ 277 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~ 277 (450)
||+|.+.|+++|+++|+++|+++|+|++| .++...+..+++|++++|++|+++++++.+||+++. ++++.++++..+.
T Consensus 145 Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~ 224 (380)
T PRK06176 145 NPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQN 224 (380)
T ss_pred CCCceecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 455556778899999999999999999888898876 4567777766655
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
..|..+++..++...++++++..|++++.+++.++.++|++++. ++.+|+++++|+|+++++++. |+|+++
T Consensus 225 ----~~G~~~~~~~~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~---g~g~~~ 297 (380)
T PRK06176 225 ----AIGGVLGPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMR---GFSGML 297 (380)
T ss_pred ----HhcCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCC---CCceEE
Confidence 56777788888999999999999999999999999999999986 899999999999999999885 799999
Q ss_pred EEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013079 356 CLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 435 (450)
Q Consensus 356 ~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 435 (450)
+|++++.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .|+.+|+|++|
T Consensus 298 s~~~~~~~~~~~f~~~l~~~~----~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dli~dl 372 (380)
T PRK06176 298 SFTLKNDSEAVAFVESLKLFI----LGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVG-IEHEQDLLEDL 372 (380)
T ss_pred EEEECCHHHHHHHHHcCCcce----EccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEec-cCCHHHHHHHH
Confidence 999987778899999999743 7999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHh
Q 013079 436 EKALSRM 442 (450)
Q Consensus 436 ~~al~~~ 442 (450)
++||+++
T Consensus 373 ~~Al~~~ 379 (380)
T PRK06176 373 EQAFAKI 379 (380)
T ss_pred HHHHhhc
Confidence 9999864
No 29
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=2.2e-55 Score=438.20 Aligned_cols=371 Identities=33% Similarity=0.469 Sum_probs=326.1
Q ss_pred hHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEe
Q 013079 42 AAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCT 120 (450)
Q Consensus 42 ~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~t 120 (450)
.++++|.. .....+|+++|||+.++|+.+++.. . ...|.|+|+++|+.+++++.||+++|++.+++|
T Consensus 5 ~t~~~~~~~~~~~~~~~~~~pi~~ss~~~~~~~~-----------~-~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~ 72 (382)
T TIGR02080 5 ATIAVRSGLNSDTQYGCVVPPIYLSTTYNFTGFN-----------E-PRAYDYSRSGNPTRDLLQQALAELEGGAGAVVT 72 (382)
T ss_pred ccceeecCCCCCCCCCCccCCeeCCceeEeCCcC-----------c-cCCCcccCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 34455533 2223468999999999999886531 1 124789999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCC
Q 013079 121 ASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 200 (450)
Q Consensus 121 sg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~N 200 (450)
+| |++|+.+++.+++++||+|+++.+.|+++...+..+... .++++.+++.+|++++++++ +++|++|++++|+|
T Consensus 73 ~g---g~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~-~~~~v~~~d~~d~~~l~~ai-~~~tklV~l~~p~N 147 (382)
T TIGR02080 73 NT---GMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKK-GCFRVLFVDQGDEQALRAAL-AQKPKLVLIETPSN 147 (382)
T ss_pred cC---HHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh-cCeEEEEECCCCHHHHHHhc-CcCceEEEEECCCC
Confidence 99 999999999999999999999999999888777555443 57889988888999999999 78899999999999
Q ss_pred CcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhhh
Q 013079 201 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQG 278 (450)
Q Consensus 201 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~ 278 (450)
|||.+.|+++|.++|+++|+++++|++| .+....+..+++|++++|+||++++++..++|+++. ++++++++...+.
T Consensus 148 PtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~- 226 (382)
T TIGR02080 148 PLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWAN- 226 (382)
T ss_pred CCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHH-
Confidence 9999999999999999999999999999 455566777899999999999999776656688755 6778888876666
Q ss_pred hhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013079 279 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 356 (450)
Q Consensus 279 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 356 (450)
..|..+++..+++++++++++..|++++.+++..+.++|++++. +|.||+++++|+|+++++++. |+|++++
T Consensus 227 ---~~g~~~sp~~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~---g~g~~~s 300 (382)
T TIGR02080 227 ---NLGVTGGAFDSYLTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQK---GFGAMLS 300 (382)
T ss_pred ---ccCCCCCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCC---CCCceEE
Confidence 67888999999999999999999999999999999999999987 899999999999999999875 7999999
Q ss_pred EEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013079 357 LDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 435 (450)
Q Consensus 357 ~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 435 (450)
|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .|+.++++++|
T Consensus 301 ~~~~~~~~~~~~f~~~l~~~~----~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvG-lE~~~dl~~dl 375 (382)
T TIGR02080 301 FELKGGEQTVRRFLGGLSLFT----LAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVG-LEDADDLIADL 375 (382)
T ss_pred EEecCcHHHHHHHHHcCCcce----EeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEec-cCCHHHHHHHH
Confidence 9997 4566789999999743 7999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHH
Q 013079 436 EKALSR 441 (450)
Q Consensus 436 ~~al~~ 441 (450)
.+||++
T Consensus 376 ~~al~~ 381 (382)
T TIGR02080 376 EQGLRA 381 (382)
T ss_pred HHHHhh
Confidence 999974
No 30
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=3.4e-55 Score=438.62 Aligned_cols=376 Identities=32% Similarity=0.488 Sum_probs=328.9
Q ss_pred ChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Q 013079 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (450)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~ 118 (450)
++.+.++|.. .....+|+++|||+.|+||.+++.+.+.+++.+. ...|.|+|+++|++++|++.||+++|.+.++
T Consensus 5 ~~~t~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~----~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al 80 (386)
T PRK06767 5 HMETALIHHGYTSEEHKGSLTPPLFQTSTFTFETAQQGEASFAGV----DPSYIYSRLGNPTVKLFEERMAVLEGGEEAL 80 (386)
T ss_pred CcccceeeCCCCCCCCCCCccCCccCccceecCCHHHHHHhhccC----cCCccccCCCCcchHHHHHHHHHHhCCCcEE
Confidence 3556666643 3334568999999999999999998888887654 2358899999999999999999999999999
Q ss_pred EecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecC
Q 013079 119 CTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESI 198 (450)
Q Consensus 119 ~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~ 198 (450)
+++| |++|+.+++.+++++||+|+++.+.|+++...+.....+ .|+++.+++..|++++++++ +++|++|++++|
T Consensus 81 ~~~s---G~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~-~gi~~~~~~~~d~~~l~~~i-~~~tklV~lesp 155 (386)
T PRK06767 81 AFGS---GMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEK-FMITHSFCDMETEADIENKI-RPNTKLIFVETP 155 (386)
T ss_pred EECC---HHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhh-cCeEEEEeCCCCHHHHHHhh-CcCceEEEEeCC
Confidence 9999 999999999999999999999999999888777655554 68899998888999999999 789999999999
Q ss_pred CCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHH-Hh
Q 013079 199 SNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD-LH 276 (450)
Q Consensus 199 ~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~-~~ 276 (450)
+||+|.+.|+++|.++|+++|+++|+|++| .+....+...|+|++++|+||+++++|+++||+++++++.+..+.. .+
T Consensus 156 ~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~ 235 (386)
T PRK06767 156 INPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMR 235 (386)
T ss_pred CCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHH
Confidence 999999999999999999999999999999 5555566777999999999999999999988999999887766543 33
Q ss_pred hhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 277 QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 277 ~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
. ..|+.+++..+++.+++++++..|++++.+++.+++++|++++. .+.+| +|++++++++ +.|++
T Consensus 236 ~----~~g~~~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~---~~gg~ 302 (386)
T PRK06767 236 K----DIGGIMAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMK---RGGGV 302 (386)
T ss_pred H----HhCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCC---CCCce
Confidence 3 45666778888888899999999999999999999999999875 57776 6789999886 68999
Q ss_pred EEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHH
Q 013079 355 LCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWS 433 (450)
Q Consensus 355 ~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~ 433 (450)
++|+++ +.+.+.+|++.|+.. + +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .|+.+|+++
T Consensus 303 vsf~l~~~~~~~~~f~~~l~~~---~-~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG-lE~~~dl~~ 377 (386)
T PRK06767 303 ISFSIKGGKEETQAFINDLHFI---T-IAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG-LESWEDIVS 377 (386)
T ss_pred EEEEEcCCHHHHHHHHHhCCcc---E-EecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHH
Confidence 999997 556788999999874 3 8999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHh
Q 013079 434 QFEKALSRM 442 (450)
Q Consensus 434 ~l~~al~~~ 442 (450)
+|.+||.++
T Consensus 378 dl~~al~~~ 386 (386)
T PRK06767 378 DLEQALKKI 386 (386)
T ss_pred HHHHHHhhC
Confidence 999999753
No 31
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=2.2e-55 Score=443.75 Aligned_cols=374 Identities=29% Similarity=0.473 Sum_probs=327.8
Q ss_pred CCChhHHHhhcCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeE
Q 013079 38 WEDPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (450)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~ 117 (450)
..++.+.++|.......+++++|||+.++||.+++.. . ...|.|+|.++|+++.+++.+|++++.+.+
T Consensus 84 ~~~~~t~~~~~~~~~~~~~~~~~Pi~~sst~~~~~~~--------~----~~~~~Y~r~gnpt~~aLE~~lA~leg~e~a 151 (464)
T PLN02509 84 EASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAI--------E----NGPYDYTRSGNPTRDALESLLAKLDKADRA 151 (464)
T ss_pred CCCcchHheeCCCCCCCCCCccCCccccceecCcccc--------c----cCCCccCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 4456677777553334578999999999999877621 1 135889999999999999999999999999
Q ss_pred EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEec
Q 013079 118 YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFES 197 (450)
Q Consensus 118 ~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~ 197 (450)
++++| |++|+.+++ .++++||+||++.+.|+++...+.....+ .|+++.+++..|++++++++ +++|++|++++
T Consensus 152 i~~~S---G~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~-~G~~v~~vd~~d~e~l~~ai-~~~TklV~les 225 (464)
T PLN02509 152 FCFTS---GMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPR-SGVVVKRVNTTNLDEVAAAI-GPQTKLVWLES 225 (464)
T ss_pred EEeCc---HHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHH-CCeEEEEeCCCCHHHHHHhC-CcCCeEEEEEC
Confidence 99999 999987655 57899999999999999988776554444 79999999988999999999 88999999999
Q ss_pred CCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHH
Q 013079 198 ISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDL 275 (450)
Q Consensus 198 ~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~ 275 (450)
|+||+|.+.|+++|+++|+++|+++|+|++| .++...+..+++|++++|++|+++++++.+||+++. ++.+.+.++..
T Consensus 226 PsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~ 305 (464)
T PLN02509 226 PTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFL 305 (464)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHH
Confidence 9999999999999999999999999999999 566667777899999999999999988877898875 44555655544
Q ss_pred hhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCc
Q 013079 276 HQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGG 353 (450)
Q Consensus 276 ~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~ 353 (450)
+. ..|..+++..|++.+++++++..|++++.++++++.++|++++. +|.||+++++|+|++++++++ |+|+
T Consensus 306 ~~----~~g~~l~p~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~---g~gg 378 (464)
T PLN02509 306 QN----SEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAK---GAGS 378 (464)
T ss_pred HH----hcCCCcCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCC---CCce
Confidence 44 45666788999999999999999999999999999999999986 899999999999999999986 7999
Q ss_pred EEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHH
Q 013079 354 LLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWS 433 (450)
Q Consensus 354 ~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~ 433 (450)
+++|.+.+.+.+.+|++.|+... +++|+|+.+|++++|++++|..++++++.++|+++++||||+| .|+.+|+|+
T Consensus 379 ~~sf~~~~~~~~~~f~~~l~l~~----~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvG-lE~~~DLi~ 453 (464)
T PLN02509 379 VFSFITGSVALSKHLVETTKYFS----IAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG-IEDVDDLIS 453 (464)
T ss_pred EEEEEeCCHHHHHHHHHcCCcce----EcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHH
Confidence 99999987777889999999633 8999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHH
Q 013079 434 QFEKALSR 441 (450)
Q Consensus 434 ~l~~al~~ 441 (450)
+|++||+.
T Consensus 454 Dl~~Al~~ 461 (464)
T PLN02509 454 DLDIAFRT 461 (464)
T ss_pred HHHHHHcc
Confidence 99999974
No 32
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=5.1e-55 Score=438.05 Aligned_cols=374 Identities=32% Similarity=0.471 Sum_probs=328.1
Q ss_pred hhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
+.++++|.. .....+|++.|||+.++||.+++.. . ...|.|+|+.+|+.+.|+++||+++|++..++
T Consensus 13 ~~t~~~~~~~~~~~~~~~~~~pi~~ss~~~~~~~~-----------~-~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~ 80 (405)
T PRK08776 13 AATAAVRAGIDRDTAYGAVTPPIVLSSNFSFDGFG-----------N-KRQYDYTRSGNPTRDLLGEALAELEGGAGGVI 80 (405)
T ss_pred ccchheeCCCCCCCCCCCccCCEeccceEEeCCCC-----------c-ccCCcccCCCChHHHHHHHHHHHHhCCCceEE
Confidence 445556643 3334578999999999999887621 0 12578999999999999999999999988999
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
++| |++|+++++.+++++||+|+++.|.|++....+.....+ .|+++.+++..|++++++++ +++|++|++++|+
T Consensus 81 ~~s---G~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~-~g~~v~~v~~~d~~~l~~~i-~~~tklV~l~~P~ 155 (405)
T PRK08776 81 TAT---GMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKK-GHFALITADLTDPRSLADAL-AQSPKLVLIETPS 155 (405)
T ss_pred EcC---HHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHh-cCcEEEEECCCCHHHHHHhc-CcCCeEEEEECCC
Confidence 999 999999999999999999999999999977666554444 68899999888999999999 7899999999999
Q ss_pred CCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhh
Q 013079 200 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQ 277 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~ 277 (450)
||||.+.|+++|+++|+++|+++|+|++| .+....+..+|+|++++|+||+++++|+.++|+++. ++++.+++...+.
T Consensus 156 NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~ 235 (405)
T PRK08776 156 NPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWAN 235 (405)
T ss_pred CCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999 555567778899999999999999888777788765 5677777765554
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
..|..+++..+++..+++++++.|++++.+++..+.++|++++. +|.||+++++|+|++++++++ |+|+++
T Consensus 236 ----~~g~~~s~~~a~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~---g~g~~~ 308 (405)
T PRK08776 236 ----ALGLTGSPFDAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQK---GFGAML 308 (405)
T ss_pred ----hcCCCCCHHHHHHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCC---CCceEE
Confidence 45666788899998899999999999999999999999999986 899999999999999999885 799999
Q ss_pred EEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 356 CLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 356 ~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
+|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .|+.+|+|++
T Consensus 309 s~~~~~~~~~~~~f~~~l~l~~----~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svG-lE~~~dli~d 383 (405)
T PRK08776 309 SFELEGGEAAVRAFVDGLRYFT----LAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVG-IESAEDLLID 383 (405)
T ss_pred EEEEcCCHHHHHHHHHhCCcce----EccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHH
Confidence 99997 5666789999999743 7999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHhh
Q 013079 435 FEKALSRMQ 443 (450)
Q Consensus 435 l~~al~~~~ 443 (450)
|++||+++.
T Consensus 384 l~~al~~~~ 392 (405)
T PRK08776 384 LRAGLARAE 392 (405)
T ss_pred HHHHHHHhH
Confidence 999999864
No 33
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=5.3e-55 Score=435.03 Aligned_cols=371 Identities=36% Similarity=0.578 Sum_probs=327.2
Q ss_pred ChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Q 013079 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (450)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~ 118 (450)
++.+.++++. .....+|+++|||+.++||.+++.. . ...|.|+|+++|+...|++.+|+++|.+..+
T Consensus 2 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~----~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~ 69 (377)
T PRK07671 2 RAKTKLIHGGIIGDPSTGAVSVPIYQVSTYKQEAVG--------K----HQGYEYSRTGNPTRAALEELIAVLEGGHAGF 69 (377)
T ss_pred CcccceeeCCCCCCCCCCCccCCccCCcceecCCCC--------C----cCCCCcCCCCChHHHHHHHHHHHHhCCCceE
Confidence 3455566643 3344578999999999999887631 1 2358899999999999999999999999999
Q ss_pred EecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecC
Q 013079 119 CTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESI 198 (450)
Q Consensus 119 ~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~ 198 (450)
++++ |+.++.+++ .++++||+|+++++.|++....+.....+ .|+++++++..|++++++++ +++|++|++++|
T Consensus 70 ~~~s---G~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~-~G~~v~~v~~~d~~~l~~ai-~~~tklV~le~P 143 (377)
T PRK07671 70 AFGS---GMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNR-FGIEHTFVDTSNLEEVEEAI-RPNTKAIYVETP 143 (377)
T ss_pred EeCC---HHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhc-CCeEEEEECCCCHHHHHHhc-CCCCeEEEEECC
Confidence 9999 999988765 57899999999999999777666555554 79999999988999999999 889999999999
Q ss_pred CCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHh
Q 013079 199 SNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLH 276 (450)
Q Consensus 199 ~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~ 276 (450)
+||+|.+.|+++|.++|+++|+++|+|++| .++...+..+++|++++|++|+++++++.++|+++. ++++++++...+
T Consensus 144 ~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~ 223 (377)
T PRK07671 144 TNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQ 223 (377)
T ss_pred CCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHH
Confidence 999999999999999999999999999999 545566777899999999999999988767787765 567888887766
Q ss_pred hhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 277 QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 277 ~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
. ..|..+++..+++++++++++..|++++.+++..+.++|++++. +|.+|+++++|+|+++++++. |+|++
T Consensus 224 ~----~~g~~~~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~---g~g~~ 296 (377)
T PRK07671 224 N----STGGILGPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQAN---GFGGM 296 (377)
T ss_pred H----hhcCCCCHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCC---CCCce
Confidence 6 56888999999999999999999999999999999999999976 899999999999999999885 78999
Q ss_pred EEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 355 LCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 355 ~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
++|++.+.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .|+.+++|++
T Consensus 297 ~s~~~~~~~~~~~f~~~l~l~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~d 371 (377)
T PRK07671 297 ISFDVGSEETANKVLERLQYFT----LAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVG-IEDGEDLIED 371 (377)
T ss_pred EEEEeCCHHHHHHHHHhCCcce----EccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHH
Confidence 9999987778899999999643 7999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHH
Q 013079 435 FEKALS 440 (450)
Q Consensus 435 l~~al~ 440 (450)
|.+||+
T Consensus 372 l~~al~ 377 (377)
T PRK07671 372 LAQALA 377 (377)
T ss_pred HHHHhC
Confidence 999974
No 34
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=9.7e-55 Score=433.50 Aligned_cols=364 Identities=43% Similarity=0.671 Sum_probs=329.2
Q ss_pred CcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHH
Q 013079 56 GGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLM 135 (450)
Q Consensus 56 ~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~ 135 (450)
|+++|||+.|+||.+++.+.+...+... ...|.|+|+.+|+.++|++++|+++|.+.+++++| |++|+.+++.
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~s---G~~Ai~~~l~ 73 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALR----EGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSS---GMAAISTVLL 73 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCC----cCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcC---HHHHHHHHHH
Confidence 4689999999999999988887776543 34689999999999999999999999999999999 9999999999
Q ss_pred HhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHH
Q 013079 136 QLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLA 215 (450)
Q Consensus 136 ~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la 215 (450)
+++++||+|+++.+.|+++...+...... .|+++.+++.+|++++++++ ++++++|++++|+||+|.+.|+++|+++|
T Consensus 74 ~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~-~g~~~~~v~~~d~~~l~~~i-~~~~~~v~~e~~~np~g~~~dl~~i~~la 151 (369)
T cd00614 74 ALLKAGDHVVASDDLYGGTYRLFERLLPK-LGIEVTFVDPDDPEALEAAI-KPETKLVYVESPTNPTLKVVDIEAIAELA 151 (369)
T ss_pred HHcCCCCEEEECCCCcchHHHHHHHHHhh-cCeEEEEeCCCCHHHHHHhc-CCCCeEEEEECCCCCCCeecCHHHHHHHH
Confidence 99999999999999999988777655554 79999999999999999999 77899999999999999999999999999
Q ss_pred HhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCH-HHHHHHHHHhhhhhhccCCCchHHHHH
Q 013079 216 HDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQGALMLLGPTMNPKVAF 293 (450)
Q Consensus 216 ~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~~~~~~~g~~~~~~~a~ 293 (450)
+++|+++|+|++| .++...+..+++|++++|++|+++++|..++|++++++ ++++.++..+. ..|..+++..++
T Consensus 152 ~~~g~~livD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~----~~g~~~~p~~a~ 227 (369)
T cd00614 152 HEHGALLVVDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRL----ALGTILSPFDAW 227 (369)
T ss_pred HHcCCEEEEECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHH----hhCCCCCHHHHH
Confidence 9999999999999 55556777889999999999999998876779999876 88888876655 467778888999
Q ss_pred HHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHH
Q 013079 294 ELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMN 370 (450)
Q Consensus 294 ~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~ 370 (450)
++++.++++..|++++.++++++.++|++++. +|.+|+++++|+|++++++++ |.|++++|.++ +.+.+.+|++
T Consensus 228 ~~l~~l~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~---g~g~i~s~~l~~~~~~~~~f~~ 304 (369)
T cd00614 228 LLLRGLKTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMS---GYGGVFSFELKGGLEAAKKFLN 304 (369)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcC---CCceEEEEEeCCCHHHHHHHHH
Confidence 98899999999999999999999999999975 789999999999999999876 78999999997 6777899999
Q ss_pred HhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 371 YLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 371 ~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
.|+... +++|+|+.+|++++|.+.+|..++++.+...|+++++||||+| .|+.+++|++|.+||+
T Consensus 305 ~l~~~~----~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svG-lE~~~dl~~dl~~al~ 369 (369)
T cd00614 305 ALKLFS----LAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVG-IEDVEDLIADLEQALK 369 (369)
T ss_pred cCCcce----EcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeC-cCCHHHHHHHHHHhhC
Confidence 999743 7999999999999999999999999889899999999999999 9999999999999973
No 35
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=9.7e-55 Score=439.18 Aligned_cols=383 Identities=33% Similarity=0.520 Sum_probs=326.0
Q ss_pred hHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEe
Q 013079 42 AAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCT 120 (450)
Q Consensus 42 ~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~t 120 (450)
.+.++|+. .....+|++.|||+.++||.+++.+++...+... ..++.|+|+.+|+.++|+++||+++|.+.+++|
T Consensus 3 ~t~~~~~~~~~~~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~----~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~ 78 (418)
T TIGR01326 3 ETLQLHAGQEPDPTTGSRAVPIYQTTSYVFDSTEHAAALFGLQ----EAGNIYSRLMNPTTDVLEQRIAALEGGVAALAV 78 (418)
T ss_pred cceeEECCCCCCCCCCCccCCccCCCCeecCCHHHHHHhhccC----cCCceeECCCChhHHHHHHHHHHHhCCCeEEEE
Confidence 34455543 3334468999999999999999987766654322 234789999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCC
Q 013079 121 ASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISN 200 (450)
Q Consensus 121 sg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~N 200 (450)
+| |++|+..++.+++++||+|+++.+.|+++...+...... .|+++++++.+|++++++++ ++++++|++++|+|
T Consensus 79 ~s---G~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~-~G~~v~~v~~~d~~~l~~~l-~~~t~~V~le~p~N 153 (418)
T TIGR01326 79 AS---GQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKR-LGIEVRFVDPDDPEEFEKAI-DENTKAVFAETIGN 153 (418)
T ss_pred cc---HHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHH-cCcEEEEECCCCHHHHHHhc-CcCCeEEEEECCCC
Confidence 99 999999999999999999999999999887776555554 79999999988999999999 88999999999999
Q ss_pred CcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHH---------
Q 013079 201 PTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVN--------- 270 (450)
Q Consensus 201 ptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~--------- 270 (450)
|+|.+.|+++|.++|+++|+++|+|++| .++...+...++|++++|+||+++++|+++||+++.++.+..
T Consensus 154 Ptg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~ 233 (418)
T TIGR01326 154 PAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFT 233 (418)
T ss_pred CCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEeccccccccccccccc
Confidence 9999999999999999999999999999 455566777789999999999999999999666654422110
Q ss_pred -------------------HHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeC
Q 013079 271 -------------------SMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLY 329 (450)
Q Consensus 271 -------------------~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~ 329 (450)
.+...+.......|..+++..++.+.++++++..|++++.+++..++++|.+++. .|.|
T Consensus 234 ~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~y 313 (418)
T TIGR01326 234 TPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNY 313 (418)
T ss_pred CCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 0001111122355777889999999999999999999999999999999999975 8999
Q ss_pred CCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHH
Q 013079 330 PGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEK 408 (450)
Q Consensus 330 p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~ 408 (450)
|+++++|+|+++++++.. |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+
T Consensus 314 P~l~~~~~~~~~~~~~~~--g~g~~~s~~l~~~~~~~~~f~~~l~l~~----~~~slG~~~sl~~~~~~~~h~~~~~~~~ 387 (418)
T TIGR01326 314 PGLASHPHHALAKKYLPK--GFGAVLSFEIKGGREAGKKFIDALKLAS----HLANVGDAKSLVIHPASTTHQQLSEEEQ 387 (418)
T ss_pred CCCCCCccHHHHHHhccC--CCcceEEEEecCCHHHHHHHHHhCCcce----eccccCCCCceeeCCCCCCcccCCHHHH
Confidence 999999999999998842 78999999996 5566789999999743 7999999999999999999999999999
Q ss_pred HhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 409 ALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 409 ~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
..+|+++++||||+| .|+.+|+|++|.+||+
T Consensus 388 ~~~gi~~~liR~svG-lE~~~dl~~dl~~Al~ 418 (418)
T TIGR01326 388 LKAGVTPGLIRLSVG-IENIDDIIADLEQALE 418 (418)
T ss_pred HhcCCCCCeEEEEec-CCCHHHHHHHHHHhhC
Confidence 999999999999999 9999999999999984
No 36
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.3e-54 Score=436.61 Aligned_cols=385 Identities=31% Similarity=0.458 Sum_probs=332.4
Q ss_pred hhHHHhh-cCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 41 PAAALAS-ARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 41 ~~~~~~~-~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
+.+.++| +......+|+++|||+.++||.+++.+++...+... ...+.|+|..+|+...|++.||+++|.+.+++
T Consensus 8 ~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~----~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~ 83 (427)
T PRK05994 8 FATLAVHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQ----AFGNIYTRITNPTNAVLEERVAALEGGTAALA 83 (427)
T ss_pred cchhheECCcCCCCCCCCccCCCcCCCCcccCCHHHHHHhhccc----cCCcceECCCCccHHHHHHHHHHHhCCCcEEE
Confidence 4455555 433344468999999999999999987777665432 22478999999999999999999999999999
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
++| |++|+.+++.+++++||+||++.+.|++....+.....+ .|+++++++.+|++++++++ +++|++|++++|+
T Consensus 84 ~~S---G~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~ai-~~~tklV~vesp~ 158 (427)
T PRK05994 84 VAS---GHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKS-FGWQVRWADADDPASFERAI-TPRTKAIFIESIA 158 (427)
T ss_pred EcC---HHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHh-cCcEEEEECCCCHHHHHHhc-CcCCeEEEEECCC
Confidence 999 999999999999999999999999999887766554444 79999999999999999999 8899999999999
Q ss_pred CCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHH-----------
Q 013079 200 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAN----------- 267 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~----------- 267 (450)
||+|.+.|+++|.++|+++|+++|+|++| .++...+.++|+|+++.|+||+++++|+.+||+++....
T Consensus 159 NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~ 238 (427)
T PRK05994 159 NPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPM 238 (427)
T ss_pred CCCCeecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCcccccccccccc
Confidence 99999999999999999999999999999 677778888999999999999999999999888764211
Q ss_pred ------------HHHHHH---H---HhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--ee
Q 013079 268 ------------LVNSMM---D---LHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KV 327 (450)
Q Consensus 268 ------------~~~~l~---~---~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v 327 (450)
+.+.+. . .+.......|..+++..|+++.++++++..|++++.+++..+.++|+++|. +|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v 318 (427)
T PRK05994 239 LSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWV 318 (427)
T ss_pred ccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 111111 0 000012356888999999999999999999999999999999999999986 89
Q ss_pred eCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHH
Q 013079 328 LYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAE 406 (450)
Q Consensus 328 ~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~ 406 (450)
.||+++++|+|+++++++.. |+|++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|++++|..++++
T Consensus 319 ~yP~l~~~~~~~~~~~~~~~--g~g~~~sf~l~~~~~~~~~~~~~l~l~~----~~~s~G~~~sl~~~p~~~~h~~~~~~ 392 (427)
T PRK05994 319 NYAGLPDDPYHALAQKYSPK--GAGAVFTFGLKGGYEAGVKLVSSLKLFS----HLANIGDTRSLVIHPASTTHRQLTDE 392 (427)
T ss_pred ECCCCCCCccHHHHHHhcCC--CceEEEEEEecCCHHHHHHHHHhCCcce----eccccCCCcceeeCCCCCCcccCCHH
Confidence 99999999999999998642 78999999997 5677889999999743 79999999999999999999999999
Q ss_pred HHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 407 EKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 407 ~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
.+...|+++++||||+| +|+.+++|++|.+||++
T Consensus 393 ~~~~~gi~~~liRlsvG-lE~~~dli~dl~~Al~~ 426 (427)
T PRK05994 393 QKVAAGAGPDVVRLSIG-IEDVDDIIADLEQALAK 426 (427)
T ss_pred HHHhcCCCCCcEEEEec-cCCHHHHHHHHHHHHhh
Confidence 99999999999999999 99999999999999975
No 37
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-54 Score=432.38 Aligned_cols=370 Identities=30% Similarity=0.518 Sum_probs=319.6
Q ss_pred ChhHHHhhcCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 40 DPAAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
.+.+.++|... ...+|++.|||+.++||.+++. ..|.|+|..+|..++|+++||+++|.+..++
T Consensus 2 ~~~t~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~---------------~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~ 65 (376)
T PRK06460 2 KDATRTVREDI-DEATGAITTPIYQTTAYHYPEG---------------EKYRYSREANPTVLELTKKIVELENAEMGVA 65 (376)
T ss_pred CcceeeeecCC-CCCCCCccCCccCCcceeeCCC---------------CCcceeCCCCccHHHHHHHHHHHhCCCcEEE
Confidence 35555556332 2346899999999999988762 2588999999999999999999999988888
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
++| |++|+..++.+++++||+|+++.+.|++....+...... .|+++..++.++.+.+++.+ ++++++|++++|+
T Consensus 66 ~~s---G~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~-~G~~v~~~~~~~~~~l~~~~-~~~tklV~l~sp~ 140 (376)
T PRK06460 66 FSS---GMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKN-WGVNVDASNPGSDNIIEKAK-SKRYDVVFVENIT 140 (376)
T ss_pred eCC---HHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHh-hCcEEEEECCCCHHHHHHhc-CCCceEEEEECCC
Confidence 899 999999999999999999999998887665555444444 78999998877766666655 6789999999999
Q ss_pred CCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhh
Q 013079 200 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG 278 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~ 278 (450)
||||.+.|+++|.++|+++|+++|+|++| .++...+...++|+++.|+||+++++++.++|++++++++++.++..+.
T Consensus 141 NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~- 219 (376)
T PRK06460 141 NPLLRVVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRR- 219 (376)
T ss_pred CCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHH-
Confidence 99999999999999999999999999999 4444455566899999999999987765456999999999988887665
Q ss_pred hhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013079 279 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLC 356 (450)
Q Consensus 279 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 356 (450)
..+..+++..++.++++.+++..|++++.++++++.++|++++. +|.||+++++|+|++++++++ |+|++++
T Consensus 220 ---~~g~~~~~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~---g~gg~~s 293 (376)
T PRK06460 220 ---TLGTSLDPHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLK---GFGGVLS 293 (376)
T ss_pred ---hcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCC---CCceEEE
Confidence 45666777788888889999999999999999999999999976 899999999999999999886 7899999
Q ss_pred EEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013079 357 LDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 435 (450)
Q Consensus 357 ~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 435 (450)
|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+.++|+++++||||+| .||.++++++|
T Consensus 294 ~~~~~~~~~~~~~~~~l~~~~----~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl 368 (376)
T PRK06460 294 FEVNGGQESALKVMKSLKLII----PAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVG-IEDVNDLIEDL 368 (376)
T ss_pred EEEcCcHHHHHHHHHhCCcce----eccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHH
Confidence 9997 5567889999998643 7999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHh
Q 013079 436 EKALSRM 442 (450)
Q Consensus 436 ~~al~~~ 442 (450)
++||.++
T Consensus 369 ~~al~~~ 375 (376)
T PRK06460 369 DRALSTL 375 (376)
T ss_pred HHHHHhh
Confidence 9999864
No 38
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=2.4e-54 Score=429.28 Aligned_cols=360 Identities=25% Similarity=0.440 Sum_probs=314.6
Q ss_pred CCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHH
Q 013079 53 GEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISS 132 (450)
Q Consensus 53 ~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~ 132 (450)
..+|++.|||++++||.+++.+++. + . ...|.|+|.+||+...|+++||+++|++.+++|+| |++|+.+
T Consensus 12 ~~~~~~~~pi~~~st~~~~~~~~~~--~-----~-~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~s---G~~Ai~~ 80 (377)
T TIGR01324 12 FSQGSVNPPLQRASTVLFDSHAAQR--R-----A-KGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPS---GLAAVTN 80 (377)
T ss_pred CCCCCccCCeeCCCceeeCChhhhc--C-----C-cCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECc---HHHHHHH
Confidence 4468999999999999998854331 1 1 34689999999999999999999999999999999 9999999
Q ss_pred HHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHH
Q 013079 133 VLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELS 212 (450)
Q Consensus 133 al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~ 212 (450)
++.+++++||+|+++++.|+++...+.....+ .|+++.+++..+.+++++++ +++|++|++++|+||+|.+.|+++|+
T Consensus 81 al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~-~gi~v~~~d~~~~e~l~~~i-~~~tklV~lesp~Np~g~~~dl~~I~ 158 (377)
T TIGR01324 81 SILAFVKAGDHVLMVDSAYEPTRYFCDIVLKR-MGVDITYYDPLIGEDIATLI-QPNTKVLFLEAPSSITFEIQDIPAIA 158 (377)
T ss_pred HHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHh-cCcEEEEECCCCHHHHHHhc-CCCceEEEEECCCCCCCcHHHHHHHH
Confidence 99999999999999999999887766444444 78999998876668899999 88999999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHH
Q 013079 213 RLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKV 291 (450)
Q Consensus 213 ~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~ 291 (450)
++|+++|+++++|++| .+..+.+.++|+|++++|++|+++++++.+||+++.+++.++.+..... ..|..+++..
T Consensus 159 ~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~----~~G~~l~p~~ 234 (377)
T TIGR01324 159 KAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSY----LMGQMVDADD 234 (377)
T ss_pred HHHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHH----HhCCCCCHHH
Confidence 9999999999999999 6667788999999999999999999998888999998887777764443 6788899999
Q ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--CHHHHHH
Q 013079 292 AFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--TEEKANR 367 (450)
Q Consensus 292 a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--~~~~~~~ 367 (450)
++..+++++++..|++++.+++..++++|++++. +|+||+++++|+|++++++++ |+|++++|+++ +.+.+.+
T Consensus 235 a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~---~~g~~~s~~l~~~~~~~~~~ 311 (377)
T TIGR01324 235 AYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFS---GSSGLFSFVLQRLTQKQVHA 311 (377)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhcc---CCCceEEEEECCCCHHHHHH
Confidence 9999999999999999999999999999999986 899999999999999999886 78999999997 4567889
Q ss_pred HHHHhhccccccccccccccccccccccc-cccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 368 LMNYLQNYAQFGFMAVSLGYYETLMSCSG-SSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 368 ~~~~l~~~~~~g~i~vs~G~~~s~~~~~~-~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
|++.|+.. + +++|+|+.+|+++++. +++|. .+...|+.+++||||+| .|+.+|+|++|.+||+++
T Consensus 312 ~~~~l~~~---~-~~~slG~~~sl~~~~~~~~~~~-----~~~~~~~~~~liR~svG-lE~~~dl~~dl~~al~~~ 377 (377)
T TIGR01324 312 FLDHLQLF---G-LGYSWGGYESLALCNQPELGHR-----PNIKRNLEGPLIRVHIG-LENVDDLKADLKAGFEAI 377 (377)
T ss_pred HHHhCCcc---e-EeccCCCccceeecCCCCCCHH-----HHHhccCCCCEEEEEeC-CCCHHHHHHHHHHHHhcC
Confidence 99999973 3 8999999999987432 23332 23456788899999999 999999999999999864
No 39
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=4.6e-54 Score=428.72 Aligned_cols=359 Identities=31% Similarity=0.475 Sum_probs=320.3
Q ss_pred CCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHH
Q 013079 54 EHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSV 133 (450)
Q Consensus 54 ~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~a 133 (450)
.+|+++|||+.++||.+++.+. ...|.|+|.++|+++++++.+|+++|++.+++++| |+.|++++
T Consensus 14 ~~~~~~~pi~~~~~~~~~~~~~------------~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~s---G~~al~~~ 78 (378)
T TIGR01329 14 PYDASSMPIYQTATFKQPLAIE------------NGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSS---GMAALDVI 78 (378)
T ss_pred CCCCcCCCeecCcceecCCccc------------cCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECC---HHHHHHHH
Confidence 3689999999999998876321 13588999999999999999999999999999999 99999987
Q ss_pred HHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHH
Q 013079 134 LMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSR 213 (450)
Q Consensus 134 l~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~ 213 (450)
+. ++++||+|+++++.|+++...+.....+ .|+++++++..|++++++++ +++|++|++++|+||+|.+.|+++|++
T Consensus 79 l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~-~G~~v~~vd~~d~~~le~~i-~~~tklv~le~psnptg~v~dl~~I~~ 155 (378)
T TIGR01329 79 TR-LLNNGDEIIAGDDLYGGTDRLLTQVVPR-SGVVVVHVDTTDLDKVKAAL-GPKTKLVLLESPTNPLQKIVDIRKISE 155 (378)
T ss_pred HH-HhCCCCEEEEcCCCchHHHHHHHHHHHH-cCcEEEEeCCCCHHHHHHhc-CcCceEEEEECCCCCCCeeecHHHHHH
Confidence 76 7899999999999999988776555454 79999999999999999999 789999999999999999999999999
Q ss_pred HHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhhhhhhccCCCchHHH
Q 013079 214 LAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKV 291 (450)
Q Consensus 214 la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~ 291 (450)
+|+++|+++|+|++| .+....+..+|+|++++|++|+++++++.++|+++. ++.+.++++..+. ..|..+++..
T Consensus 156 la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~----~~G~~~~~~~ 231 (378)
T TIGR01329 156 MAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQN----STGSGLAPFD 231 (378)
T ss_pred HHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHH----hcCCcCCHHH
Confidence 999999999999998 666677788899999999999999887666799876 5556677766554 4677788888
Q ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHH
Q 013079 292 AFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLM 369 (450)
Q Consensus 292 a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~ 369 (450)
++++.++++++..|+++..+++..++++|++++. ++.+|+++++|+|+++++++. |+|++++|.+.+.+.+.+|+
T Consensus 232 a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~---g~~~~~sf~~~~~~~~~~~~ 308 (378)
T TIGR01329 232 CWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAK---GAGSVLSFETGSVALSKRLV 308 (378)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCC---CcceEEEEEECCHHHHHHHH
Confidence 8888999999999999999999999999999986 899999999999999999874 78999999998766688999
Q ss_pred HHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 370 NYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 370 ~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
+.|+. |+ +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| .|+.+|++++|++||+++
T Consensus 309 ~~L~~---~~-i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-lE~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 309 EATKL---FS-ITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG-IEDVDDLISDLDIAFVTA 376 (378)
T ss_pred HhCcC---cc-cccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHHHHHhc
Confidence 99986 43 8999999999999999999999999999999999999999999 999999999999999865
No 40
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=5.9e-54 Score=429.41 Aligned_cols=373 Identities=35% Similarity=0.501 Sum_probs=324.1
Q ss_pred CCChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCe
Q 013079 38 WEDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA 116 (450)
Q Consensus 38 ~~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~ 116 (450)
++++.+++++.. .....+|+++|||+.++||.+++.+.+ .+.|.|+|+++|.+++|+++||+++|.+.
T Consensus 10 ~~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~-----------~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~ 78 (388)
T PRK07811 10 NQGFATRAIHAGYEPDPATGAVNPPIYASSTFAQDGVGGL-----------RGGYEYARTGNPTRTALEEQLAALEGGAY 78 (388)
T ss_pred CCCcccceeeCCCCCCCCCCCccCCccCCcceecCCcccc-----------cCCCcccCCCCccHHHHHHHHHHHhCCCc
Confidence 345666666643 334457899999999999988764321 13478999999999999999999999999
Q ss_pred EEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEe
Q 013079 117 AYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE 196 (450)
Q Consensus 117 ~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~ 196 (450)
.++++| |++|+.+++.+++++||+|+++.+.|+++...+.....+ .|+++.+++..|++++++++ +++|++|+++
T Consensus 79 ~i~~~s---G~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~-~gi~~~~~d~~d~e~l~~~i-~~~tklV~ie 153 (388)
T PRK07811 79 GRAFSS---GMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTR-WGVEYTPVDLSDLDAVRAAI-TPRTKLIWVE 153 (388)
T ss_pred eEEeCC---HHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcC-CCeEEEEeCCCCHHHHHHhc-CcCCeEEEEE
Confidence 999999 999999999999999999999999999887777655555 79999999988999999999 7899999999
Q ss_pred cCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHH
Q 013079 197 SISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMD 274 (450)
Q Consensus 197 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~ 274 (450)
+|+||+|.+.|+++|+++|+++|+++|+|++| .+....+...++|++++|++|+++++++.+||+++. ++++.+.+..
T Consensus 154 ~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~ 233 (388)
T PRK07811 154 TPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAF 233 (388)
T ss_pred CCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999 444456777899999999999999988777798876 5667676665
Q ss_pred HhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcC
Q 013079 275 LHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFG 352 (450)
Q Consensus 275 ~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g 352 (450)
.+. ..|...++..++++.+.++++..|+++..+++..+.++|++++. +|.||+++++|+|+++++++. |+|
T Consensus 234 ~~~----~~g~~~s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~---g~g 306 (388)
T PRK07811 234 LQN----GAGAVPGPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMR---GFG 306 (388)
T ss_pred HHH----hcCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcC---CCC
Confidence 544 45667778888888889999999999999999999999999986 899999999999999999885 799
Q ss_pred cEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHH
Q 013079 353 GLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQR 431 (450)
Q Consensus 353 ~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~ 431 (450)
++++|+++ +.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++.+ ..|+++++||||+| .|+.+++
T Consensus 307 ~~~s~~~~~~~~~~~~f~~~l~~~~----~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svG-lE~~~dl 378 (388)
T PRK07811 307 GMVSVRLAGGEEAARDFCARTKVFT----LAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVG-IEDVADL 378 (388)
T ss_pred ceEEEEeCCCHHHHHHHHHhCCcce----eeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeC-CCCHHHH
Confidence 99999997 5677889999999743 79999999999999999999988855 35999999999999 9999999
Q ss_pred HHHHHHHHHH
Q 013079 432 WSQFEKALSR 441 (450)
Q Consensus 432 i~~l~~al~~ 441 (450)
+++|.+||++
T Consensus 379 ~~dl~~al~~ 388 (388)
T PRK07811 379 LADLEQALGQ 388 (388)
T ss_pred HHHHHHHhhC
Confidence 9999999863
No 41
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.3e-53 Score=427.30 Aligned_cols=377 Identities=33% Similarity=0.511 Sum_probs=330.2
Q ss_pred CChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeE
Q 013079 39 EDPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (450)
Q Consensus 39 ~~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~ 117 (450)
+++.+.+++.. .....+|++++||+.|+||.+++.+. ...|.|+|..+|..++++++||+++|++..
T Consensus 5 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~------------~~~~~y~r~~~p~~~~le~~lA~l~g~~~~ 72 (390)
T PRK08064 5 YSIDTLLLHNQYKHDKQTGAVNVPIYHASTFHQFDFDT------------FGKYDYSRSGNPTREALEDIIAELEGGTKG 72 (390)
T ss_pred CCcccceeeCCCCCCCCCCCccCCcccCcceecCcccc------------cCCCcccCCCChhHHHHHHHHHHHhCCCCe
Confidence 34556566633 33445799999999999998877532 124789999999999999999999999888
Q ss_pred EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEec
Q 013079 118 YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFES 197 (450)
Q Consensus 118 ~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~ 197 (450)
+++++ |+.|+.+++. ++++||+|+++++.|+++...+.....+ .|+++.+++.+|++++++++ +++|++|++++
T Consensus 73 v~~~s---G~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~-~G~~v~~v~~~d~~~l~~~l-~~~tklV~l~~ 146 (390)
T PRK08064 73 FAFAS---GMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSR-FGIEHTFVDMTNLEEVAQNI-KPNTKLFYVET 146 (390)
T ss_pred EEECC---HHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHH-cCCEEEEECCCCHHHHHHhc-CCCceEEEEEC
Confidence 99999 9999998886 7789999999999999877766555554 79999999998999999999 88999999999
Q ss_pred CCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHH
Q 013079 198 ISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDL 275 (450)
Q Consensus 198 ~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~ 275 (450)
|+||||.+.|+++|.++|+++|+++|+|++| .+....+.++|+|+++.|+||+++++++.++|+++. ++++++.++..
T Consensus 147 p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~ 226 (390)
T PRK08064 147 PSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFL 226 (390)
T ss_pred CCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999 444456677899999999999999887766798765 56788888777
Q ss_pred hhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCc
Q 013079 276 HQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGG 353 (450)
Q Consensus 276 ~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~ 353 (450)
+. ..|...++..++...++++++..|++++.+++..+.++|++++. ++.+|+++++|+|++++++++ |+|+
T Consensus 227 ~~----~~g~~~~~~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~---g~gg 299 (390)
T PRK08064 227 QN----SFGAVLGVQDCWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQAT---SAGA 299 (390)
T ss_pred HH----hcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCC---Ccce
Confidence 66 56777888888888899999999999999999999999999985 899999999999999999776 7999
Q ss_pred EEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHH
Q 013079 354 LLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWS 433 (450)
Q Consensus 354 ~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~ 433 (450)
+++|++++.+.+.+|++.++... +++|+|+.+|++++|++++|..++.+.+..+|+++++||+|+| .|+++++|+
T Consensus 300 ~~sf~~~~~~~~~~f~~~l~l~~----~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvG-le~~~dli~ 374 (390)
T PRK08064 300 VLSFTLQSEEAVRQFVSHVKLPV----FAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVG-LENVDDLIA 374 (390)
T ss_pred EEEEEECCHHHHHHHHHhCCcce----EcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHH
Confidence 99999998778889999998633 6999999999999999999999999999899999999999999 999999999
Q ss_pred HHHHHHHHhhhc
Q 013079 434 QFEKALSRMQDS 445 (450)
Q Consensus 434 ~l~~al~~~~~~ 445 (450)
+|.+||+++++-
T Consensus 375 dl~~Al~~~~~~ 386 (390)
T PRK08064 375 DFEQALSYVEEP 386 (390)
T ss_pred HHHHHHHhcccC
Confidence 999999997543
No 42
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=7.2e-53 Score=421.74 Aligned_cols=376 Identities=24% Similarity=0.330 Sum_probs=324.3
Q ss_pred ChhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Q 013079 40 DPAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAY 118 (450)
Q Consensus 40 ~~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~ 118 (450)
++.+.++|.. .....+|+++||||.++||.+++.+++...+.+. ...|.|+|+++|++++|++.+|+++|++.++
T Consensus 9 ~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~----~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l 84 (394)
T PRK07050 9 ALQTRIVQPDDQIPPGFRSFVTPVARASTVVFPDLATMRALDWRQ----DVQWRYGLHATPTSLALAQRLAEIEGGRHAL 84 (394)
T ss_pred CccchheECCCCCCCCCCCccCCeeCCcceecCCHHHHHhhcccc----cCCcccCCCCCHHHHHHHHHHHHHhCCCeEE
Confidence 4656666643 3334578999999999999999988887666432 2458899999999999999999999999999
Q ss_pred EecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecC
Q 013079 119 CTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESI 198 (450)
Q Consensus 119 ~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~ 198 (450)
+|+| |++|+.+++.+++++||+|+++++.|.++...+...... .|+++.+++..+.+++++++ +++|++|++++|
T Consensus 85 ~~~s---gt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~-~Gi~v~~vd~~~~~~l~~~i-~~~tklV~le~p 159 (394)
T PRK07050 85 LQPS---GLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARD-FGITVRFYDPLIGAGIADLI-QPNTRLIWLEAP 159 (394)
T ss_pred Eecc---HHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHh-cCeEEEEECCCCHHHHHHhc-CCCCeEEEEECC
Confidence 9999 999999999999999999999999999988766444444 79999999877888899999 889999999999
Q ss_pred CCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHh
Q 013079 199 SNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLH 276 (450)
Q Consensus 199 ~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~ 276 (450)
+||+|.+.++++|+++|+++|+++|+|++| .+..+++..+|+|++++|++|+++++++.+||+++. +++++++++..+
T Consensus 160 ~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~ 239 (394)
T PRK07050 160 GSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLAR 239 (394)
T ss_pred CCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999 666788888999999999999999887766787654 678888887766
Q ss_pred hhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 277 QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 277 ~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
. ..|..+++..++.++++++++..|++++.+++.++.++|++++. ++.+|+++++|+|.++++++. ++|++
T Consensus 240 ~----~~G~~~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~---~~g~~ 312 (394)
T PRK07050 240 M----RLGIGVSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFT---GAGGL 312 (394)
T ss_pred H----hcCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCC---CCceE
Confidence 6 56888889999999999999999999999999999999999975 899999999999999998775 78999
Q ss_pred EEEEeCC---HHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHH
Q 013079 355 LCLDMET---EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQR 431 (450)
Q Consensus 355 ~~~~l~~---~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~ 431 (450)
++|.++. .+.+.+|++.|+... +++|+|+.+|++. |.++++.... ...+.+++||||+| .|+.+++
T Consensus 313 ~s~~l~~~~~~~~~~~~~~~l~~~~----~~~s~G~~~sl~~-~~~~~~~~~~-----~~~~~~~~iR~svG-lE~~~dl 381 (394)
T PRK07050 313 FSVVFDERYSPAQVDAFVEALELFA----IGWSWGGACSLAM-PYDVASMRTA-----KWPHRGTLVRLYIG-LEDEADL 381 (394)
T ss_pred EEEEECCCCCHHHHHHHHHcCCCCe----eccccCCccceEe-eCcccccchh-----hcCCCCCEEEEEeC-cCCHHHH
Confidence 9999973 467899999999743 8999999999987 6554444432 23366799999999 9999999
Q ss_pred HHHHHHHHHHh
Q 013079 432 WSQFEKALSRM 442 (450)
Q Consensus 432 i~~l~~al~~~ 442 (450)
+++|.+||++.
T Consensus 382 ~~dl~~al~~~ 392 (394)
T PRK07050 382 IADLEQALEAA 392 (394)
T ss_pred HHHHHHHHHHh
Confidence 99999999865
No 43
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=6.1e-53 Score=418.17 Aligned_cols=371 Identities=31% Similarity=0.497 Sum_probs=321.4
Q ss_pred hhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
+.++++|+. .....+|++++||+.++||.+++.+.+....... ...|.|+|.++|++++|++++|+++|++.+++
T Consensus 9 ~~t~~~~~~~~~~~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~----~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~ 84 (384)
T PRK06434 9 FNTRAVQSGELRDPRFGNVTTPIFETSTFVYPNSEKEAYMDSTR----GMPYIYTRWGNPTVQAFEEKYAVLENAEHALS 84 (384)
T ss_pred cccceeECCCCCCCCCCCccCCeeCCcceecCChHHhhhccccc----cCCcceeCCCChhHHHHHHHHHHHhCCCcEEE
Confidence 556666644 3334578999999999999999876654222111 23589999999999999999999999999999
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
++| ||.|+++++.+++++||+||++...|+++...+...+.+ .|+++++++.++.+.+. +..+++++|++++|+
T Consensus 85 ~sS---G~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~-~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~s 158 (384)
T PRK06434 85 FSS---GMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKT-LGIHVDYIDTDRLNSLD--FDPSNYDLIYAESIT 158 (384)
T ss_pred eCC---HHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHh-cCcEEEEECCCChhhee--ecCCCeeEEEEEcCC
Confidence 999 999999999999999999999999999888777666665 89999999987666655 423479999999999
Q ss_pred CCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhh
Q 013079 200 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQ 277 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~ 277 (450)
||++.+.|+++|+++|++++ +++|+++ +++...|...|+|++++|.+|+++++++.+||+++. ++++.++++..+.
T Consensus 159 npt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~ 236 (384)
T PRK06434 159 NPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRK 236 (384)
T ss_pred CCCceeecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHH
Confidence 99999999999999999998 5679999 777778888999999999999999988878898866 5567777765554
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
..|..+++..|++.+++++++..|++++++++..+.++|+++|. +|.||+++ +++++++ |+|+++
T Consensus 237 ----~~G~~~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~---g~g~~~ 303 (384)
T PRK06434 237 ----TLGSNPDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLR---GFGGML 303 (384)
T ss_pred ----hcCCCCCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcC---CCCceE
Confidence 56778889999999999999999999999999999999999986 89999974 7888875 799999
Q ss_pred EEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013079 356 CLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 435 (450)
Q Consensus 356 ~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 435 (450)
+|++++.+.+.+|++.|+... +++|+|+.+|++++|.+++|..++++.+..+|+++++||||+| +|+++|+|++|
T Consensus 304 sf~l~~~~~~~~f~~~l~l~~----~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvG-lEd~~dLi~dl 378 (384)
T PRK06434 304 SFELRSMEDVHKFIRNLEIPM----VAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIG-IEDIDDLIKDI 378 (384)
T ss_pred EEEECCHHHHHHHHHhCCcce----EccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeC-cCCHHHHHHHH
Confidence 999987777899999999743 7999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHH
Q 013079 436 EKALSR 441 (450)
Q Consensus 436 ~~al~~ 441 (450)
.+||.+
T Consensus 379 ~~Al~~ 384 (384)
T PRK06434 379 ENALSK 384 (384)
T ss_pred HHHhcC
Confidence 999863
No 44
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-51 Score=409.85 Aligned_cols=375 Identities=32% Similarity=0.469 Sum_probs=325.3
Q ss_pred hHHHhhcCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEec
Q 013079 42 AAALASARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTA 121 (450)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ts 121 (450)
...++|+.+...++++++|||+.++||.+++.+++...+... ...|.|+|+.+|++++|++.+|+++|++.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~ 85 (389)
T PRK05968 10 LAALITAHDEGNAFDAVVPPIFQTSLFTFDSYDEMEDVYAGE----KVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFA 85 (389)
T ss_pred hhheeecCCCccCCCCccCCccCCcceecCCHHHHHHhhcCC----CCCccccCCCChhHHHHHHHHHHHhCCCcEEEEC
Confidence 456667666667889999999999999999998888887643 2458899999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCC
Q 013079 122 SDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 201 (450)
Q Consensus 122 g~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~Np 201 (450)
| |+.|+.+++.+++++||+|+++.+.|+++...+...... .|+++++++.+|++++++++ ++|++|++++|+|+
T Consensus 86 s---G~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~~i--~~tklV~ie~pt~~ 159 (389)
T PRK05968 86 S---GMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKR-MGVEVDYVDGRDEEAVAKAL--PGAKLLYLESPTSW 159 (389)
T ss_pred C---HHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHH-cCceEEEeCCCCHHHHHHhc--ccCCEEEEECCCCC
Confidence 9 999999999988999999999999999987766555544 79999999999999999987 47899999999999
Q ss_pred cccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhh
Q 013079 202 TLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL 280 (450)
Q Consensus 202 tG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~ 280 (450)
++.+.|+++|+++|+++|+++|+|++| .+....+..+|+|++++|+||+++++|+.+||+++.+++++++++..+..
T Consensus 160 ~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~-- 237 (389)
T PRK05968 160 VFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYP-- 237 (389)
T ss_pred CCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHH--
Confidence 999999999999999999999999999 54446677789999999999999998876679999998888887654331
Q ss_pred hccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013079 281 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 358 (450)
Q Consensus 281 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 358 (450)
..|..+++..|+.++++++++..|++++.++++++.++|++++. .+.+|+++++|.. .+ .|+|++++|+
T Consensus 238 -~~g~~~~~~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~-----~~---~g~g~~~sf~ 308 (389)
T PRK05968 238 -YLGAKLSPFEAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPA-----GL---SGTSGLFSFI 308 (389)
T ss_pred -hCCCCCChHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHH-----hC---CCCceEEEEE
Confidence 34567788889999999999999999999999999999999975 7888999988842 22 3789999999
Q ss_pred eCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCC-CHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013079 359 METEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSEL-NAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 437 (450)
Q Consensus 359 l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~-~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 437 (450)
+++...+.+|++.|+..+ +++|+|+.||+++ |+++++... +.+.+...|+++++||+|+| .|+++++|++|++
T Consensus 309 ~~~~~~~~~f~~~L~~~~----~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvG-lE~~~dl~~dl~~ 382 (389)
T PRK05968 309 FREGIDVRAFADALKLFR----LGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVG-LEGTEALWADLEQ 382 (389)
T ss_pred ECCHHHHHHHHHhCCccE----EecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHHHH
Confidence 985556889999998643 8999999999998 888887774 47778889999999999999 9999999999999
Q ss_pred HHHHhh
Q 013079 438 ALSRMQ 443 (450)
Q Consensus 438 al~~~~ 443 (450)
||++..
T Consensus 383 al~~~~ 388 (389)
T PRK05968 383 ALAAAS 388 (389)
T ss_pred HHHHhh
Confidence 998764
No 45
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1.2e-51 Score=408.38 Aligned_cols=354 Identities=31% Similarity=0.472 Sum_probs=308.4
Q ss_pred CChhHHHhhcCC-CCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeE
Q 013079 39 EDPAAALASARH-EFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAA 117 (450)
Q Consensus 39 ~~~~~~~~~~~~-~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~ 117 (450)
+++.+.++|+.. ....+++++||||.|+||.+++. +. ...|.|+|+++|++++|+++||+++|++.+
T Consensus 5 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~-----------~~-~~~~~Y~R~~~p~~~~le~~lA~leg~~~~ 72 (364)
T PRK07269 5 LHINTILAQAGIKSDEATGALVTPLHFSTTYQHPEF-----------GQ-STGFDYTRTKNPTRAKLEETLAAIESADYA 72 (364)
T ss_pred CCcccceeeCCCCCCCCCCCccCCccCCcceecCCC-----------CC-cCCcceeCCCCccHHHHHHHHHHHhCCCeE
Confidence 345666667543 33446899999999999988762 11 235899999999999999999999999999
Q ss_pred EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEec
Q 013079 118 YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFES 197 (450)
Q Consensus 118 ~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~ 197 (450)
++++| |++|+.+++. ++++||+||++.+.|++....+....+. .++.+.+. .|++++++++ +++|++|++++
T Consensus 73 v~~~s---G~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~-~~~~~~~~--~d~~~l~~~i-~~~TklV~les 144 (364)
T PRK07269 73 LATSS---GMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKE-GRFHFTYA--NTEEELIAAI-EEDTDIVYIET 144 (364)
T ss_pred EEeCC---HHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhc-CcEEEEec--CCHHHHHHhc-CcCceEEEEEC
Confidence 99999 9999999884 6799999999999999888766544443 45666664 4899999999 88999999999
Q ss_pred CCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHH
Q 013079 198 ISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDL 275 (450)
Q Consensus 198 ~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~ 275 (450)
|+||+|.+.|+++|+++|+++|+++++|++| .++...|...|+|++++|+||+++++|+.+||+++. ++++.++++..
T Consensus 145 P~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~ 224 (364)
T PRK07269 145 PTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYN 224 (364)
T ss_pred CCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHH
Confidence 9999999999999999999999999999998 666678888899999999999999999888899876 56777777655
Q ss_pred hhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCc
Q 013079 276 HQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGG 353 (450)
Q Consensus 276 ~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~ 353 (450)
+. ..|..+++..|+++.++++++..|++++++++..+.++|++++. +|.||+ .|+
T Consensus 225 ~~----~~G~~~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg-------------------~gg 281 (364)
T PRK07269 225 LN----TTGAVLSPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG-------------------KGG 281 (364)
T ss_pred HH----HhCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC-------------------cCc
Confidence 44 56788899999999999999999999999999999999999874 788885 688
Q ss_pred EEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHH
Q 013079 354 LLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWS 433 (450)
Q Consensus 354 ~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~ 433 (450)
+++|.+.+.+.+.+|++.++... +++|+|+.+|++++|++.+|..++.+.+..+|+++++||||+| .|+.+++|+
T Consensus 282 ~~sf~~~~~~~~~~f~~~l~~~~----~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvG-lE~~~dli~ 356 (364)
T PRK07269 282 MISFKVADETRIPHILNSLKVFT----FAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIG-IEDARDLIA 356 (364)
T ss_pred EEEEEECCHHHHHHHHHhCCcce----EccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHH
Confidence 99999987777889999998643 7999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHH
Q 013079 434 QFEKALS 440 (450)
Q Consensus 434 ~l~~al~ 440 (450)
+|++||+
T Consensus 357 dl~~al~ 363 (364)
T PRK07269 357 DLKQALE 363 (364)
T ss_pred HHHHHhc
Confidence 9999985
No 46
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=2.5e-49 Score=393.82 Aligned_cols=356 Identities=29% Similarity=0.490 Sum_probs=307.1
Q ss_pred hhHHHhhcC-CCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Q 013079 41 PAAALASAR-HEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYC 119 (450)
Q Consensus 41 ~~~~~~~~~-~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ 119 (450)
+.+.++|.. .....+|+++|||+.+|||.+++. ++ ...|.|+|+++|+.++|+++||+++|++..++
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~-----------~~-~~~~~y~r~~~pt~~~le~~la~l~g~~~~~~ 72 (366)
T PRK08247 5 IETKLAQIGNRSDERTGTVNPPVYFSTAYRHEGI-----------GE-STGFDYSRTGNPTRGVLEQAIADLEGGDQGFA 72 (366)
T ss_pred cchhheeCCCCCCCCCCCccCCcccCcccccCCC-----------CC-cCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 345555533 333457999999999999987662 11 23589999999999999999999999999999
Q ss_pred ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCC
Q 013079 120 TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 120 tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
++| |++|+.+++ .++++||+|+++++.|++....+.....+ .|+++.+++..|++++++++ +++|++|++++|+
T Consensus 73 ~~s---G~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~-~G~~v~~vd~~d~~~l~~~i-~~~tklv~le~P~ 146 (366)
T PRK08247 73 CSS---GMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKK-WNVRFVYVNTASLKAIEQAI-TPNTKAIFIETPT 146 (366)
T ss_pred EcC---HHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhc-cCceEEEECCCCHHHHHHhc-ccCceEEEEECCC
Confidence 999 999999876 57789999999999999987777655555 79999999999999999999 7899999999999
Q ss_pred CCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcC-HHHHHHHHHHhh
Q 013079 200 NPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQ 277 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~ 277 (450)
||+|.+.++++|+++|+++|+++|+|++| .++...+...++|++++|+||++++++..++|+++.+ +++.+.+...+.
T Consensus 147 NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~ 226 (366)
T PRK08247 147 NPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQN 226 (366)
T ss_pred CCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHH
Confidence 99999999999999999999999999999 6666677777999999999999998877667999886 677777776655
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
..+..+++..++++.++++++..|+++++++++.+.++|++++. .+.+|+ .|+++
T Consensus 227 ----~~g~~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~-------------------~gg~~ 283 (366)
T PRK08247 227 ----AAGAVLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG-------------------RGGML 283 (366)
T ss_pred ----hcCCCCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC-------------------cCcEE
Confidence 45666777788888889999999999999999999999999864 466664 57899
Q ss_pred EEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013079 356 CLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 435 (450)
Q Consensus 356 ~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 435 (450)
+|.+++.+.+.+|++.++... +++|+|+.+|++.+|++.+|..++++.+...|+++++||||+| .|+.++++++|
T Consensus 284 sf~~~~~~~~~~~~~~l~~~~----~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svG-lE~~~dl~~dl 358 (366)
T PRK08247 284 SFRLQDEEWVNPFLKSLKLIT----FAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVG-IENVEDLIADL 358 (366)
T ss_pred EEEECCHHHHHHHHHcCCcce----EccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHHHHHHHH
Confidence 999987666778999888633 7999999999999999999999999999899999999999999 99999999999
Q ss_pred HHHHHHh
Q 013079 436 EKALSRM 442 (450)
Q Consensus 436 ~~al~~~ 442 (450)
++||+++
T Consensus 359 ~~al~~~ 365 (366)
T PRK08247 359 KQAFKQV 365 (366)
T ss_pred HHHHhhc
Confidence 9999864
No 47
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.7e-49 Score=394.45 Aligned_cols=356 Identities=28% Similarity=0.364 Sum_probs=300.7
Q ss_pred HHHhh-cCCCCCCCCcccccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEec
Q 013079 43 AALAS-ARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTA 121 (450)
Q Consensus 43 ~~~~~-~~~~~~~~~~~~~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~ts 121 (450)
++++| +......+|+++|||+.++||.+++.+ . ...|.|+|+++|...+|+++||+++ .+.+++++
T Consensus 6 t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~----~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~~ 72 (366)
T PRK07582 6 TRSVHAGGPEAVPGEPVLPGPVFAAPYHLSPGE--------P----TGPDTYGRASNPTWRALEAALGELE-GAEALVFP 72 (366)
T ss_pred cceeeCCCCCCCCCCCccCCccccceEEccCcc--------c----cCCceeECCCCccHHHHHHHHHHHc-CCCEEEEC
Confidence 44455 323234468999999999999988521 1 2347799999999999999999999 67788889
Q ss_pred ChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCC
Q 013079 122 SDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNP 201 (450)
Q Consensus 122 g~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~Np 201 (450)
+ |++|+.+++.+++++||+|+++.+.|+++...+...+.+ .|+++++++.++... .+ .+++++|++++|+||
T Consensus 73 s---G~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~-~G~~v~~v~~~~~~~---~~-~~~t~lV~le~p~NP 144 (366)
T PRK07582 73 S---GMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAP-LGVTVREAPTAGMAE---AA-LAGADLVLAETPSNP 144 (366)
T ss_pred C---HHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhc-CeEEEEEECCCChHH---Hh-ccCceEEEEECCCCC
Confidence 9 999999999999999999999999999988776555554 799999998765432 34 468999999999999
Q ss_pred cccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhhhh
Q 013079 202 TLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGA 279 (450)
Q Consensus 202 tG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~ 279 (450)
+|.+.|+++|+++|+++|+++++|++| .+....+.++++|++++|+||+++++++.++||++. ++++++++...+.
T Consensus 145 tg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~-- 222 (366)
T PRK07582 145 GLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRL-- 222 (366)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHH--
Confidence 999999999999999999999999998 556667778899999999999998765444599886 5778888877666
Q ss_pred hhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEE
Q 013079 280 LMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCL 357 (450)
Q Consensus 280 ~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~ 357 (450)
..|..+++..++++.++++++..|++++.+++..++++|++++. +|.||+++++|+|+++++++. |+|++++|
T Consensus 223 --~~g~~~~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~---~~gg~~s~ 297 (366)
T PRK07582 223 --LAGAIPGPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMR---RFGGLVSF 297 (366)
T ss_pred --HhCCCCCHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCC---CCcceEEE
Confidence 56778889999999999999999999999999999999999986 899999999999999999986 79999999
Q ss_pred EeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013079 358 DMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 437 (450)
Q Consensus 358 ~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 437 (450)
++++.+.+.+|++.++... +++|+|+.+|++.++... ..++++++||+|+| .|+++++|++|.+
T Consensus 298 ~~~~~~~~~~~~~~l~~~~----~~~s~G~~~sl~~~~~~~-----------~~~~~~~liR~svG-lE~~~dli~dl~~ 361 (366)
T PRK07582 298 ELADAAAAERFVAASRLVV----AATSFGGVHTSADRRARW-----------GDAVPEGFVRLSCG-IEDTDDLVADLER 361 (366)
T ss_pred EeCCHHHHHHHHHhCCcce----ecccCCCccchhhhHHHc-----------CCCCCCCeEEEEec-cCCHHHHHHHHHH
Confidence 9998888889999998633 799999999987443211 12367899999999 9999999999999
Q ss_pred HHHHh
Q 013079 438 ALSRM 442 (450)
Q Consensus 438 al~~~ 442 (450)
||+++
T Consensus 362 al~~~ 366 (366)
T PRK07582 362 ALDAL 366 (366)
T ss_pred HHhhC
Confidence 99864
No 48
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-49 Score=378.06 Aligned_cols=342 Identities=18% Similarity=0.166 Sum_probs=276.2
Q ss_pred ccccCccccCCH-HHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHh-
Q 013079 62 IEASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQL- 137 (450)
Q Consensus 62 i~~att~~~~~~-~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l- 137 (450)
-|+|||++.+++ +.|.+++...||||+|.|.||+.+...++++|++||+++|++ .++|||| |||++|++|+++
T Consensus 6 D~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG---~TEsnNlaI~g~~ 82 (386)
T COG1104 6 DNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSG---ATESNNLAIKGAA 82 (386)
T ss_pred cccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecC---CcHHHHHHHHhhH
Confidence 368999999985 999999999999999999999999999999999999999975 5899999 999999999983
Q ss_pred -cc----CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccC
Q 013079 138 -CS----SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVAN 207 (450)
Q Consensus 138 -~~----~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~ 207 (450)
.. .|.|||++..+|+++...++.+ .+ .|++|+|++++ |+++|+++| +++|.+|+|+++||++|++||
T Consensus 83 ~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~-~g~~Vtyl~V~~~G~v~~e~L~~al-~~~T~LVSim~aNnE~G~IQp 159 (386)
T COG1104 83 LAYRNAQKGKHIITSAIEHPAVLNTCRYL-ER-QGFEVTYLPVDSNGLVDLEQLEEAL-RPDTILVSIMHANNETGTIQP 159 (386)
T ss_pred HhhhcccCCCeEEEcccccHHHHHHHHHH-Hh-cCCeEEEeCCCCCCeEcHHHHHHhc-CCCceEEEEEecccCeeeccc
Confidence 22 4789999999999999999655 44 69999999987 999999999 899999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHH-HHH-HHHHhhhhhhcc
Q 013079 208 IPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANL-VNS-MMDLHQGALMLL 283 (450)
Q Consensus 208 l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~-~~~-l~~~~~~~~~~~ 283 (450)
+++|+++|+++|++||+|++| +++..++..+++|+++.|.||++||+| + |+++.++.. +.+ +.+..+....+.
T Consensus 160 I~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkG--i-GaLyv~~~~~~~p~i~GGgQE~g~Rs 236 (386)
T COG1104 160 IAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKG--I-GALYVRPGVRLEPLIHGGGQERGLRS 236 (386)
T ss_pred HHHHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCc--e-EEEEECCCCccCceeccCcCCCCCCC
Confidence 999999999999999999998 888899988899999999999999999 6 777655432 232 333333233345
Q ss_pred CCCchHHHHHH---HHccCCcHHHHHHHHHHHHHHHHHHHHhC-CC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013079 284 GPTMNPKVAFE---LSERIPHLGLRMKEHCHRALIFARRMKKL-GL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 358 (450)
Q Consensus 284 g~~~~~~~a~~---~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 358 (450)
|+...+..+.+ +....+.+.....+...++++|.+.|.+. +. .++....++ ..++++|.
T Consensus 237 GTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~r----------------lP~~~~~~ 300 (386)
T COG1104 237 GTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPR----------------LPNILNFS 300 (386)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccC----------------CCCeEEEE
Confidence 54443333322 11244556777788889999999999876 43 333222222 34499999
Q ss_pred eCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCC----CeEEEEeCCCCCHHHHHHH
Q 013079 359 METEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISA----GLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 359 l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~----~~iRiS~g~~~~~~~~i~~ 434 (450)
|++.+ ++.++..|+..+ |++|+|++||.....+ ++++.+||+++ +.|||||| ..+++++++.
T Consensus 301 f~gv~-gE~ll~~L~~~g----I~vStGSACsS~~~~p--------ShVL~AmG~~~e~a~~siR~S~g-~~tt~eei~~ 366 (386)
T COG1104 301 FPGVE-GESLLLALDLAG----IAVSTGSACSSGSLEP--------SHVLRAMGISEELAHGSIRFSLG-RFTTEEEIDA 366 (386)
T ss_pred eCCCc-HHHHHHhccccC----eEEeccccccCCCCCc--------cHHHHHcCCChHHhCccEEEEcC-CCCCHHHHHH
Confidence 99876 788898998655 8999999988765444 35677777763 67999999 9898888888
Q ss_pred HHHHHHHh
Q 013079 435 FEKALSRM 442 (450)
Q Consensus 435 l~~al~~~ 442 (450)
+.+++.++
T Consensus 367 ~~~~l~~~ 374 (386)
T COG1104 367 AAEALKEI 374 (386)
T ss_pred HHHHHHHH
Confidence 87777654
No 49
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-34 Score=276.72 Aligned_cols=340 Identities=18% Similarity=0.182 Sum_probs=240.8
Q ss_pred cccCccccCC-HHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhcc
Q 013079 63 EASATFTVME-PETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLCS 139 (450)
Q Consensus 63 ~~att~~~~~-~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~~ 139 (450)
++||++..+. +++|.+++...++||.+. .|+......+++.|+.+|+++|++ .++||+| +||+++++++++..
T Consensus 49 ~~at~p~~~~Vldam~~~~~~~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~---ATEs~Nlvl~~v~~ 124 (428)
T KOG1549|consen 49 NQATGPMDPRVLDAMLPYLLEYLGNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSG---ATESNNLVLKGVAR 124 (428)
T ss_pred cCcCCCCCHHHHHHHHHHHHHhhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCC---chHHHHHHHHHhhc
Confidence 3566666665 499999999999999987 788888888999999999999985 4899999 99999999998743
Q ss_pred -CCC----EEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHH
Q 013079 140 -SGG----HVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIP 209 (450)
Q Consensus 140 -~gd----~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~ 209 (450)
.+| +||+.+.+|+++...+..+.. .|++++++++. |.+.++++| +++|++|.|+++||.+|.++|++
T Consensus 125 ~~~~~~~k~iitl~~eH~~v~~s~~~l~~--~g~~Vt~lpv~~~~~~d~~~~~~~i-~~~T~lv~I~~Vnn~~gv~~Pv~ 201 (428)
T KOG1549|consen 125 FFGDKTKKHIITLQTEHPCVLDSCRALQE--EGLEVTYLPVEDSGLVDISKLREAI-RSKTRLVSIMHVNNEIGVLQPVK 201 (428)
T ss_pred cccccccceEEEecccCcchhHHHHHHHh--cCeEEEEeccCccccccHHHHHHhc-CCCceEEEEEecccCccccccHH
Confidence 455 999999999999998865544 58999999876 889999999 89999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCH---HHH--HHHHHHhhhhhhc
Q 013079 210 ELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPA---NLV--NSMMDLHQGALML 282 (450)
Q Consensus 210 ~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~---~~~--~~l~~~~~~~~~~ 282 (450)
+|.++|+++|+.+|+|++| +....++.++++|+++.|+||+||++| + |+++.++ .+. ..+.+..+.....
T Consensus 202 EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~--i-GaLYvr~~~~~~~~~p~~~GGgq~r~~r 278 (428)
T KOG1549|consen 202 EIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPG--I-GALYVRRKRPRLRVEPPLSGGGQERGLR 278 (428)
T ss_pred HHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCc--c-eEEEEccCCCcccccCcccCCccccccc
Confidence 9999999999999999998 888899999999999999999999999 6 8887764 111 1111111100112
Q ss_pred cCCCchHH-----HHHHHH-ccCCcHHHHHHHHHHHHHHHHHHHHh-CCC-eeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 283 LGPTMNPK-----VAFELS-ERIPHLGLRMKEHCHRALIFARRMKK-LGL-KVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 283 ~g~~~~~~-----~a~~~~-~~~~~l~~~~~~~~~~~~~l~~~L~~-~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
.|....+. .|.... +........+ .+....+...+.. .+. ....++- ..+.++
T Consensus 279 sGT~~~~~~~~~gsA~e~~~~~~~~~~~~~---~~~~~~ll~~i~~~~~~~~~~G~~~----------------~~~~~~ 339 (428)
T KOG1549|consen 279 SGTVATPLAVGLGSAAEFVNKEMAYDEAII---KRLSEKLLMGIGQSLPEVTLNGSGK----------------SRYPGL 339 (428)
T ss_pred cCCcCchhhhhhHHHHHHHHhhcchhHHHH---HHHHHHHHHHHhhhCchhhccCCcc----------------cccccc
Confidence 22221111 111111 1111122222 2233344444322 221 2222221 125568
Q ss_pred EEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 355 LCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 355 ~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
++|.++-.+ ...++..++. +..+.|.+|+.-..+++......+.+. ..-...||||+| +.+++++++.
T Consensus 340 ~~~~~~~~~-g~~~~~~~~~------~~l~s~~a~~~~~~epsy~l~~~G~~~----~~~~~~iRis~G-~y~t~~di~~ 407 (428)
T KOG1549|consen 340 VSLSFPYVE-GESLLMDLKD------VALSSGSACTSASLEPSYVLRAIGVDE----DLAHSSIRISIG-RYTTEEDIDY 407 (428)
T ss_pred eeeeccccc-Ccchhhhhhh------hhhcccchhhcCCCCcchhhhhcCcch----hhhcceeEEeee-eeCcHHHHHH
Confidence 888887322 3445566665 788999888765433333222222111 112577999999 9999999999
Q ss_pred HHHHHHHhh
Q 013079 435 FEKALSRMQ 443 (450)
Q Consensus 435 l~~al~~~~ 443 (450)
+.+++.+..
T Consensus 408 ~~~~i~~~v 416 (428)
T KOG1549|consen 408 LVDAIKKLV 416 (428)
T ss_pred HHHHHHHHH
Confidence 998887754
No 50
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.8e-32 Score=270.91 Aligned_cols=336 Identities=17% Similarity=0.188 Sum_probs=254.5
Q ss_pred ccCccccCC-HHHHHHhhcCCCCCCC-CCccccCCCChhHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHHHHHh-
Q 013079 64 ASATFTVME-PETMRRMFAGELGPDR-DFFIYSRHFNPTVLNLSRQMAALEGTE---AAYCTASDKAGMSAISSVLMQL- 137 (450)
Q Consensus 64 ~att~~~~~-~~~~~~~~~~~~~n~~-~~~~y~r~~~~~~~~l~~~iA~l~g~~---~~~~tsg~~~gt~ai~~al~~l- 137 (450)
.+++..... ++++.++++...+|+. +.|..+.......+++|+.+|+++|++ .++||+| .|+|++++..++
T Consensus 29 aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~---tT~aln~va~~l~ 105 (405)
T COG0520 29 AATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRG---TTEALNLVARGLG 105 (405)
T ss_pred cccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCC---hhHHHHHHHHHhh
Confidence 445552223 5888888887778876 467777777778999999999999976 3899999 999999999988
Q ss_pred --ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHH
Q 013079 138 --CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPE 210 (450)
Q Consensus 138 --~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~ 210 (450)
.++||+||++..+|++....|.....+ .|.++++++.+ ++++++..+ +++|++|.+.+++|.||.+.|+++
T Consensus 106 ~~~~~gdeIv~s~~EH~sn~~pw~~~~~~-~Ga~v~~i~~~~~g~~~~~~~~~~i-~~~Tklvais~vSn~tG~~~pv~~ 183 (405)
T COG0520 106 RSLKPGDEIVVSDLEHHSNIVPWQELAKR-TGAKVRVIPLDDDGLLDLDALEKLI-TPKTKLVALSHVSNVTGTVNPVKE 183 (405)
T ss_pred hhhcCCCEEEEccCcchhhHHHHHHHHHh-cCcEEEEEecCCCCCcCHHHHHHhc-CCCceEEEEECccccccccchHHH
Confidence 688999999999999999999766665 79999999864 688999988 899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCC-ccccCccceEEEEEcCHHHHHHHHHHhhh---------
Q 013079 211 LSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISK-FISGGADIIAGAVCGPANLVNSMMDLHQG--------- 278 (450)
Q Consensus 211 I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK-~~g~~g~~igG~l~~~~~~~~~l~~~~~~--------- 278 (450)
|+++||++|+++++|.+| +++..++.++|+|++.+|.|| .+||.| + |++++++++.+.+.....+
T Consensus 184 I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~G--i-GvLy~r~~~l~~l~P~~~gg~~~~~~~~ 260 (405)
T COG0520 184 IAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTG--I-GVLYVRKELLEELEPFLGGGGMIEYVSR 260 (405)
T ss_pred HHHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCc--e-EEEEEchHHHhhcCCcccCCCceeeecc
Confidence 999999999999999998 777888889999999999999 555546 5 9999999988876221110
Q ss_pred ---------hhhccCCCchHHHHHHHHccCCc-----HHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHH
Q 013079 279 ---------ALMLLGPTMNPKVAFELSERIPH-----LGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKS 343 (450)
Q Consensus 279 ---------~~~~~g~~~~~~~a~~~~~~~~~-----l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~ 343 (450)
....-.+++....+..+...++. +....++.+++.+++.+.|++++. ++..|..
T Consensus 261 ~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~----------- 329 (405)
T COG0520 261 DEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPD----------- 329 (405)
T ss_pred cccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-----------
Confidence 11122333333332222222222 223344457888889999998875 7766652
Q ss_pred HhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeC
Q 013079 344 MANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVG 423 (450)
Q Consensus 344 ~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g 423 (450)
...+++++|.+++.. ...+...|... | |++..|..|.... .+..++ .+.+|+|++
T Consensus 330 -----~~r~~~vsF~v~~~~-~~dv~~~L~~~---g-I~vr~g~~ca~p~--------------~~~~~~-~~~iR~S~~ 384 (405)
T COG0520 330 -----ADRGGIVSFNVKGIH-PHDVATLLDEK---G-IAVRAGHHCAQPL--------------HRLLGV-DATIRASLH 384 (405)
T ss_pred -----ccCceEEEEEeCCCC-HHHHHHHHHhC---C-eEEEeccccccHH--------------HHhcCC-CCceEEEEe
Confidence 025779999999653 45555566543 3 7888887764321 112333 345999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhh
Q 013079 424 YLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 424 ~~~~~~~~i~~l~~al~~~~~ 444 (450)
..+++++|+.|.++|+++.+
T Consensus 385 -~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 385 -LYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred -ecCCHHHHHHHHHHHHHHhh
Confidence 99999999999999998754
No 51
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=4.3e-32 Score=274.56 Aligned_cols=335 Identities=16% Similarity=0.180 Sum_probs=240.1
Q ss_pred cccCccccCC-HHHHHHhhcCCCCCCC-CCccccCCCChhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHh
Q 013079 63 EASATFTVME-PETMRRMFAGELGPDR-DFFIYSRHFNPTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQL 137 (450)
Q Consensus 63 ~~att~~~~~-~~~~~~~~~~~~~n~~-~~~~y~r~~~~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l 137 (450)
++++++..+. .+++.++++..++|+. +.|..+.......+++|+.||+++|+ +.++||+| +|+++++++.++
T Consensus 29 ~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g---~t~~l~~~~~~~ 105 (406)
T PRK09295 29 SAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRG---TTEGINLVANSW 105 (406)
T ss_pred CcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCC---HHHHHHHHHHHh
Confidence 3455565445 4888888887777874 45655666667789999999999986 36899999 999999998763
Q ss_pred ----ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCH
Q 013079 138 ----CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANI 208 (450)
Q Consensus 138 ----~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l 208 (450)
+++||+|++++++|++....+.....+ .|+++.+++.+ |+++|++++ +++|++|++++++||||.++|+
T Consensus 106 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-~g~~v~~v~~~~~~~~d~~~l~~~i-~~~t~lv~l~~~~n~tG~~~~~ 183 (406)
T PRK09295 106 GNSNVRAGDNIIISEMEHHANIVPWQMLCAR-VGAELRVIPLNPDGTLQLETLPALF-DERTRLLAITHVSNVLGTENPL 183 (406)
T ss_pred hhhcCCCcCEEEECcchhhHHHHHHHHHHHH-cCcEEEEEecCCCCCCCHHHHHHhc-CCCcEEEEEecchhcccccCCH
Confidence 578999999999999876655444333 68888888653 789999999 8899999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhh-------
Q 013079 209 PELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA------- 279 (450)
Q Consensus 209 ~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~------- 279 (450)
++|.++|+++|+++++|++| +....+...+++|+++.|+||.+|++| + |+++.++++++.+.....+.
T Consensus 184 ~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~~~~~g~~~~~~~~ 260 (406)
T PRK09295 184 AEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTG--I-GILYVKEALLQEMPPWEGGGSMIATVS 260 (406)
T ss_pred HHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCC--c-EEEEEchHhHhhCCCcccCCceeeeee
Confidence 99999999999999999998 434445556689999999999999877 5 89988887765542111100
Q ss_pred -----------hhccCCCchHHHHHHHHccCCc-----HHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHH
Q 013079 280 -----------LMLLGPTMNPKVAFELSERIPH-----LGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLK 342 (450)
Q Consensus 280 -----------~~~~g~~~~~~~a~~~~~~~~~-----l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~ 342 (450)
.....++++......+...++. +....++..++++++.+.|++++ .++..|.
T Consensus 261 ~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~----------- 329 (406)
T PRK09295 261 LTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ----------- 329 (406)
T ss_pred cCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-----------
Confidence 0011223332222222222222 23344556778888888888774 3555442
Q ss_pred HHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEe
Q 013079 343 SMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSV 422 (450)
Q Consensus 343 ~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~ 422 (450)
..+++++|.+++.. ...+...|.. +| |.++.|+.|+.. ....++. ++.||+|+
T Consensus 330 -------~~~~iv~~~~~~~~-~~~~~~~L~~---~g-I~v~~g~~c~~~--------------~~~~~~~-~~~iRiS~ 382 (406)
T PRK09295 330 -------NRLGVIAFNLGKHH-AYDVGSFLDN---YG-IAVRTGHHCAMP--------------LMAYYNV-PAMCRASL 382 (406)
T ss_pred -------CCceEEEEEECCcC-HHHHHHHHHh---CC-eEEeccccchHH--------------HHHHHCC-CCEEEEEc
Confidence 12468999988532 3455556654 33 788888776531 1122343 36899999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhh
Q 013079 423 GYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 423 g~~~~~~~~i~~l~~al~~~~~ 444 (450)
+ ..+++++++.|.++|+++.+
T Consensus 383 ~-~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 383 A-MYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred c-CCCCHHHHHHHHHHHHHHHH
Confidence 9 99999999999999988754
No 52
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-31 Score=265.56 Aligned_cols=276 Identities=22% Similarity=0.250 Sum_probs=208.7
Q ss_pred ChhHHHHHHHHHHHh----C----CCe-EEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCe
Q 013079 98 NPTVLNLSRQMAALE----G----TEA-AYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI 168 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~----g----~~~-~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~ 168 (450)
.....+||+.||+.+ | ++. +++|+| +++|+..++.+++.+||+|++++|.|+.+...+. +.|.
T Consensus 64 ~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~G---a~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~-----~~gg 135 (393)
T COG0436 64 SAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAG---AKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVK-----LAGG 135 (393)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCC---HHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHH-----hcCC
Confidence 334556666666654 3 234 899999 9999999999999999999999999999998875 4677
Q ss_pred eEEEeCC-----C---CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc--
Q 013079 169 TTTFVDI-----S---DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-- 235 (450)
Q Consensus 169 ~v~~v~~-----~---d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-- 235 (450)
++.+++. + |+++|++++ +++||+|++++||||||.+.+ +++|+++|++||+++|+|++|..+.++.
T Consensus 136 ~~v~v~l~~~~~~f~~d~~~l~~~i-~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~ 214 (393)
T COG0436 136 KPVPVPLDEEENGFKPDLEDLEAAI-TPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAE 214 (393)
T ss_pred EEEEEeCCcCccCCcCCHHHHHhhc-CccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCC
Confidence 7777763 1 799999999 789999999999999999975 7899999999999999999997766543
Q ss_pred ----cCC----CCeEEEeCCCCccccCccceEEEEEcC-HHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCC---cHH
Q 013079 236 ----ARL----GADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP---HLG 303 (450)
Q Consensus 236 ----~~~----g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~---~l~ 303 (450)
.++ ...+++.|+||.++++|+|+ ||++++ +++++.+...++ ....+.+++.|.++..++...+ .+.
T Consensus 215 ~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRv-G~~v~~~~~l~~~~~~~~~-~~~~~~~~~~Q~aa~~aL~~~~~~~~~~ 292 (393)
T COG0436 215 HPSILELAGARDRTITINSFSKTYGMTGWRI-GWVVGPPEELIAALRKLKS-YLTSCAPTPAQYAAIAALNGPQSDEVVE 292 (393)
T ss_pred cCCHhhcCCCcceEEEEecccccccccccce-eEeecChHHHHHHHHHHHH-hcccCCCHHHHHHHHHHhcCccchHHHH
Confidence 111 24689999999999999999 999998 788888876655 3334567777878877777553 334
Q ss_pred HHHHHHHHHHHHHHHHHHhCC-CeeeC-CCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccc
Q 013079 304 LRMKEHCHRALIFARRMKKLG-LKVLY-PGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFM 381 (450)
Q Consensus 304 ~~~~~~~~~~~~l~~~L~~~~-~~v~~-p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i 381 (450)
...+.+.++++.+.+.|.+.+ +.+.. |. .+..++..++...+...|...|-. ..| +
T Consensus 293 ~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~-------------------Ga~Y~~~~i~~~~d~~~f~~~Ll~--~~g-V 350 (393)
T COG0436 293 EMREEYRERRDLLVEALNEIGGLSVVKPPE-------------------GAFYLFPKIPELLDSEEFAKKLLE--EAG-V 350 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeeeccCCC-------------------eeEEEEeecCCCCCHHHHHHHHHH--hCC-E
Confidence 444678999999999999886 55554 32 456778888743345667666643 233 5
Q ss_pred ccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC
Q 013079 382 AVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT 427 (450)
Q Consensus 382 ~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~ 427 (450)
++..|+.... ...+++||||++ ..+
T Consensus 351 ~v~PG~~Fg~--------------------~~g~~~vRis~~-~~~ 375 (393)
T COG0436 351 AVVPGSGFGE--------------------PPGEGYVRLSLA-TSE 375 (393)
T ss_pred EEecccccCC--------------------CCCCCeEEEEEe-cCH
Confidence 6666643211 013689999999 543
No 53
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=8.6e-32 Score=270.29 Aligned_cols=342 Identities=14% Similarity=0.123 Sum_probs=241.4
Q ss_pred cccCccccCCH-HHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhc
Q 013079 63 EASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLC 138 (450)
Q Consensus 63 ~~att~~~~~~-~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~ 138 (450)
+++||+..+.+ +.+.+++...++||.+.|.|+....+.+++.++++++.+++ +.++||+| +++++++++.++.
T Consensus 5 ~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g---~teal~~~~~~~~ 81 (382)
T TIGR03403 5 NNATTMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSC---ATESNNWVLKGVY 81 (382)
T ss_pred CcCCCCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCC---HHHHHHHHHHHHH
Confidence 46777776664 88888888889999988888877677777777888877764 57899999 9999999998752
Q ss_pred -----cC-CCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccC
Q 013079 139 -----SS-GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVAN 207 (450)
Q Consensus 139 -----~~-gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~ 207 (450)
++ +++|+++..+|+++...+. .+.. .|.++.+++.+ |++++++++ ++++++|++++++||||.+.|
T Consensus 82 ~~~~~~~~~~~vi~~~~e~ps~~~~~~-~~~~-~G~~v~~v~~~~~g~~d~~~l~~~i-~~~t~lv~~~~~~n~tG~~~~ 158 (382)
T TIGR03403 82 FDEILKGGKNHIITTEVEHPAVRATCA-FLES-LGVEVTYLPINEQGTITAEQVREAI-TEKTALVSVMWANNETGMIFP 158 (382)
T ss_pred HhhcccCCCCEEEEcCCccHHHHHHHH-HHHH-CCCEEEEEecCCCCCCCHHHHHHhc-ccCCeEEEEEcccCCCccccC
Confidence 45 4689999999999887764 3333 68899888764 789999999 788999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHH-HHHHH-HHhhhhhhcc
Q 013079 208 IPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANL-VNSMM-DLHQGALMLL 283 (450)
Q Consensus 208 l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~-~~~l~-~~~~~~~~~~ 283 (450)
+++|.++|+++|+++|+|+++ +....+..+.++|+++.|+||++|++| + |+++.++.. +.+.. ..........
T Consensus 159 ~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G--~-g~l~vr~~~~~~p~~~g~~~~~~~~~ 235 (382)
T TIGR03403 159 IKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKG--V-GGLYIRKGVELTPLFHGGEHMGGRRS 235 (382)
T ss_pred HHHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCc--e-EEEEECCCCCCCCcccCCCCCCCccc
Confidence 999999999999999999998 445556667789999999999999888 5 666544332 11111 0000000012
Q ss_pred CC--CchHHHHHHHHccC-CcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013079 284 GP--TMNPKVAFELSERI-PHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 359 (450)
Q Consensus 284 g~--~~~~~~a~~~~~~~-~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 359 (450)
|. .+...++..+++.. +.++...++..++++++.+.|++++. .+..|.-. ..++++.|.+
T Consensus 236 gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~----------------~~~~~~~~~~ 299 (382)
T TIGR03403 236 GTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREH----------------RVPNTILISI 299 (382)
T ss_pred CCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCC----------------CcCCEEEEEe
Confidence 21 11221222222211 22444456678888899999987654 55443211 1234778888
Q ss_pred CCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCC----CCeEEEEeCCCCCHHHHHHHH
Q 013079 360 ETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS----AGLVRMSVGYLGTLDQRWSQF 435 (450)
Q Consensus 360 ~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~----~~~iRiS~g~~~~~~~~i~~l 435 (450)
++.+ ...++..|... | |.++.|+.|+..... +...+.++|.+ .+.||+|++ ..+++++++.|
T Consensus 300 ~~~~-~~~~~~~L~~~---g-I~v~~g~~c~~~~~~--------~~~v~~~~g~~~~~~~~~iR~s~~-~~~t~~did~~ 365 (382)
T TIGR03403 300 KGVE-GEAMLWDLNKA---G-IAASTGSACASEDLE--------ANPVMVAIGADKELAHTAIRLSLS-RFTTEEEIDYT 365 (382)
T ss_pred CCCC-HHHHHHhhccC---C-EEEEchhccCCCCCC--------cCHHHHHcCCChHHhCeeEEEECC-CCCCHHHHHHH
Confidence 7543 45566666643 3 899999887643221 12445556654 378999999 98999999999
Q ss_pred HHHHHHhh
Q 013079 436 EKALSRMQ 443 (450)
Q Consensus 436 ~~al~~~~ 443 (450)
.++|+++.
T Consensus 366 ~~~l~~~~ 373 (382)
T TIGR03403 366 IEVFKKAV 373 (382)
T ss_pred HHHHHHHH
Confidence 88887654
No 54
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=9.4e-32 Score=269.94 Aligned_cols=343 Identities=15% Similarity=0.128 Sum_probs=244.0
Q ss_pred ccCccccCC-HHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhc--
Q 013079 64 ASATFTVME-PETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLC-- 138 (450)
Q Consensus 64 ~att~~~~~-~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~-- 138 (450)
++++++.+. .+++.++++..++||++.|..++......+++|+.+|+++|+ +.+++|+| +++++++++.+++
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g---~t~a~~~~~~~~~~~ 83 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSG---GTESNYLAIQSLLNA 83 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCc---HHHHHHHHHHHHHHh
Confidence 456665555 488888888888999888877777677899999999999985 46899999 9999999988775
Q ss_pred --cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHH
Q 013079 139 --SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 211 (450)
Q Consensus 139 --~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I 211 (450)
++|++|+++..+|+++...+. .... .|.++..++.+ |++++++++ ++++++|++++++||||.+.|+++|
T Consensus 84 ~~~~g~~vv~~~~~h~s~~~~~~-~~~~-~g~~v~~v~~~~~~~~d~~~l~~~l-~~~~~lv~~~~~~n~tG~~~~~~~I 160 (381)
T PRK02948 84 LPQNKKHIITTPMEHASIHSYFQ-SLES-QGYTVTEIPVDKSGLIRLVDLERAI-TPDTVLASIQHANSEIGTIQPIAEI 160 (381)
T ss_pred ccCCCCEEEECCcccHHHHHHHH-HHHh-CCCEEEEEeeCCCCCCCHHHHHHhc-CCCCEEEEEECCcCCcEeehhHHHH
Confidence 468999999999998877763 2233 68888877653 789999998 7889999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHH-HHHHHHHh--h-hhhhccCC
Q 013079 212 SRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANL-VNSMMDLH--Q-GALMLLGP 285 (450)
Q Consensus 212 ~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~-~~~l~~~~--~-~~~~~~g~ 285 (450)
.++|+++|+++|+|+++ +....+..++++|+++.|+||++|++| + |+++.++++ +..+.... . .....+.+
T Consensus 161 ~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~ 237 (381)
T PRK02948 161 GALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKG--V-GAVYINPQVRWKPVFPGTTHEKGFRPGTVN 237 (381)
T ss_pred HHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCc--E-EEEEEcCCCCCCCcccCCCCCCCcCCCCcc
Confidence 99999999999999886 445556666789999999999999888 5 777666543 11111000 0 00001112
Q ss_pred CchHHHHHHHHccC-CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHH
Q 013079 286 TMNPKVAFELSERI-PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEK 364 (450)
Q Consensus 286 ~~~~~~a~~~~~~~-~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~ 364 (450)
.+...++..++... +.+.+..++..++++++.+.|++++.++...+.. .. ....+++|.+++..
T Consensus 238 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~---~~-----------~~~~i~~~~~~~~~- 302 (381)
T PRK02948 238 VPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHS---TS-----------CLPHIIGVTIKGIE- 302 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCC---cc-----------CcCCEEEEEeCCCC-
Confidence 22222332333222 4455666778889999999999887644322101 00 12347888887533
Q ss_pred HHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCC----CCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 365 ANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS----AGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 365 ~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~----~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
...+...|.. .| |.++.|+.|+.....++ ....++|.+ .+.||||+| ..+++++++.|.++|.
T Consensus 303 ~~~~~~~l~~---~g-I~v~~g~~c~~~~~~p~--------~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~l~~~l~ 369 (381)
T PRK02948 303 GQYTMLECNR---RG-IAISTGSACQVGKQEPS--------KTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDTTIHALE 369 (381)
T ss_pred HHHHHHhccc---CC-EEEEchHhcCCCCCCCC--------HHHHHcCCChHHhCceEEEEcC-CCCCHHHHHHHHHHHH
Confidence 4556666654 34 78898988765333222 233334431 478999999 9999999999999988
Q ss_pred Hhh
Q 013079 441 RMQ 443 (450)
Q Consensus 441 ~~~ 443 (450)
++.
T Consensus 370 ~~~ 372 (381)
T PRK02948 370 TIG 372 (381)
T ss_pred HHH
Confidence 764
No 55
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=4.8e-31 Score=266.60 Aligned_cols=333 Identities=17% Similarity=0.189 Sum_probs=235.8
Q ss_pred ccCccccCC-HHHHHHhhcCCCCCCC-CCccccCCCChhHHHHHHHHHHHhCC-C--eEEEecChHHHHHHHHHHHHHh-
Q 013079 64 ASATFTVME-PETMRRMFAGELGPDR-DFFIYSRHFNPTVLNLSRQMAALEGT-E--AAYCTASDKAGMSAISSVLMQL- 137 (450)
Q Consensus 64 ~att~~~~~-~~~~~~~~~~~~~n~~-~~~~y~r~~~~~~~~l~~~iA~l~g~-~--~~~~tsg~~~gt~ai~~al~~l- 137 (450)
+++++..+. .+++.++++..++|+. +.|..++......+++|+.+|+++|+ + .++||+| +|+++++++.++
T Consensus 26 a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~---~t~~i~~~~~~~~ 102 (401)
T PRK10874 26 AATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRG---TTESINLVAQSYA 102 (401)
T ss_pred CcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC---HHHHHHHHHHHhh
Confidence 344444334 4888888887777864 35656666667789999999999997 3 4899999 999999999887
Q ss_pred ---ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHH
Q 013079 138 ---CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIP 209 (450)
Q Consensus 138 ---~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~ 209 (450)
+++||+|++++++|++....+.....+ .|+++++++.+ |++++++++ +++|++|++++++||||.+.|++
T Consensus 103 ~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-~g~~v~~v~~~~~~~~d~~~l~~~i-~~~t~lv~i~~~~n~tG~~~~~~ 180 (401)
T PRK10874 103 RPRLQPGDEIIVSEAEHHANLVPWLMVAQQ-TGAKVVKLPLGADRLPDVDLLPELI-TPRTRILALGQMSNVTGGCPDLA 180 (401)
T ss_pred hccCCCcCEEEECCcchHHHHHHHHHHHHH-hCCEEEEEecCCCCcCCHHHHHHhc-CcCcEEEEEeCCcccccCcCCHH
Confidence 378999999999999865555443333 68888887753 789999999 88999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhh--------
Q 013079 210 ELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA-------- 279 (450)
Q Consensus 210 ~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~-------- 279 (450)
+|+++|+++|+++|+|++| +.+..+...+++|+++.|+||.+|++| + |+++.++++++.+.....+.
T Consensus 181 ~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (401)
T PRK10874 181 RAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTG--I-GVLYGKSELLEAMSPWQGGGKMLTEVSF 257 (401)
T ss_pred HHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCc--c-EEEEEchHHHhcCCCeecCCcceEeecc
Confidence 9999999999999999999 455556556689999999999999887 5 99988888877653221100
Q ss_pred ---------hhccCCCchH---HHHHHHHccCC--cHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHH
Q 013079 280 ---------LMLLGPTMNP---KVAFELSERIP--HLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSM 344 (450)
Q Consensus 280 ---------~~~~g~~~~~---~~a~~~~~~~~--~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~ 344 (450)
.....++++. .+...++..+. ......++..++++++.+.|++++ ..+..+.
T Consensus 258 ~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~------------- 324 (401)
T PRK10874 258 DGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQ------------- 324 (401)
T ss_pred CccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-------------
Confidence 0011112221 11222221111 122233445667888888888763 3443321
Q ss_pred hccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC
Q 013079 345 ANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY 424 (450)
Q Consensus 345 ~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~ 424 (450)
.+++++|.+++.. ...+.+.|... | |.++.|..|+. .....+|. .+.||||++
T Consensus 325 ------~~~i~~~~~~~~~-~~~~~~~L~~~---g-I~v~~g~~~~~--------------~~~~~~g~-~~~iRiS~~- 377 (401)
T PRK10874 325 ------DSSLLAFDFAGVH-HSDLVTLLAEY---G-IALRAGQHCAQ--------------PLLAALGV-TGTLRASFA- 377 (401)
T ss_pred ------CCcEEEEEECCcC-HHHHHHHHHHC---C-cEEeccccchH--------------HHHHHhCC-CCEEEEEec-
Confidence 2348888887533 35566666543 3 67787766531 11222343 378999999
Q ss_pred CCCHHHHHHHHHHHHHHhhh
Q 013079 425 LGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 425 ~~~~~~~i~~l~~al~~~~~ 444 (450)
..+++++++.|.++|+++.+
T Consensus 378 ~~nt~edid~ll~al~~~~~ 397 (401)
T PRK10874 378 PYNTQSDVDALVNAVDRALE 397 (401)
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 98899999999999887643
No 56
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=7.7e-31 Score=264.81 Aligned_cols=333 Identities=17% Similarity=0.136 Sum_probs=233.6
Q ss_pred ccCccccCC-HHHHHHhhcCCCCCCC-CCccccCCCChhHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHHHHHh-
Q 013079 64 ASATFTVME-PETMRRMFAGELGPDR-DFFIYSRHFNPTVLNLSRQMAALEGTE---AAYCTASDKAGMSAISSVLMQL- 137 (450)
Q Consensus 64 ~att~~~~~-~~~~~~~~~~~~~n~~-~~~~y~r~~~~~~~~l~~~iA~l~g~~---~~~~tsg~~~gt~ai~~al~~l- 137 (450)
+++++..+. .+++.++++...+||. +.|..++......+++|+.+|+++|++ .+++|+| +|+++++++.++
T Consensus 23 a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g---~t~~l~~~~~~~~ 99 (398)
T TIGR03392 23 AATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRG---TTESINLVAQSYA 99 (398)
T ss_pred ccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCC---hHHHHHHHHHHhh
Confidence 344444444 4777787776667774 345455445567889999999999963 5899999 999999999887
Q ss_pred ---ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHH
Q 013079 138 ---CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIP 209 (450)
Q Consensus 138 ---~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~ 209 (450)
+++||+|++++++|++....+.....+ .|+++++++.+ |++++++++ +++|++|++++++||||.+.|++
T Consensus 100 ~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~-~g~~v~~v~~~~~~~~~~~~l~~~i-~~~t~lv~i~~~~n~tG~~~~~~ 177 (398)
T TIGR03392 100 RPRLQPGDEIIVSEAEHHANLIPWLMVAQQ-TGAKVVKLPIGADLLPDIRQLPELL-TPRTRILALGQMSNVTGGCPDLA 177 (398)
T ss_pred hccCCCCCEEEECCcchhHHHHHHHHHHHH-cCcEEEEEecCCCCCcCHHHHHHHh-ccCceEEEEECccccccccCCHH
Confidence 478999999999998865444333333 68888888754 789999999 88999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhh--------
Q 013079 210 ELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA-------- 279 (450)
Q Consensus 210 ~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~-------- 279 (450)
+|+++|+++|+++++|++| +.+..+...+++|+++.|+||.+|++| + |+++.++++++.+.....+.
T Consensus 178 ~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (398)
T TIGR03392 178 RAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTG--I-GVLYGKTELLEAMPPWQGGGKMLSHVSF 254 (398)
T ss_pred HHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCc--e-EEEEEcHHHHhhCCCeecCCceEeeccc
Confidence 9999999999999999999 444445555689999999999999877 5 99998888776653221100
Q ss_pred ---------hhccCCCchH---HHHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHH
Q 013079 280 ---------LMLLGPTMNP---KVAFELSERI--PHLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSM 344 (450)
Q Consensus 280 ---------~~~~g~~~~~---~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~ 344 (450)
.....+++.. ..+..++..+ ..+....++..++++++.+.|++++ .++..+.
T Consensus 255 ~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~------------- 321 (398)
T TIGR03392 255 DGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCP------------- 321 (398)
T ss_pred cccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-------------
Confidence 0011122222 1111222111 1223334455777888888888764 3433221
Q ss_pred hccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC
Q 013079 345 ANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY 424 (450)
Q Consensus 345 ~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~ 424 (450)
.+++++|.+++.. .+.+.+.|... | |.++.|+.|+. .....+|. ++.||||++
T Consensus 322 ------~~~i~~~~~~~~~-~~~l~~~L~~~---g-I~v~~g~~~~~--------------~~~~~~g~-~~~iRvS~~- 374 (398)
T TIGR03392 322 ------GSSLLAFDFAGVH-HSDLAALLAES---G-IALRAGQHCAQ--------------PLMAALGV-SGTLRASFA- 374 (398)
T ss_pred ------CCcEEEEEeCCcC-HHHHHHHHHhC---C-EEEecCccchH--------------HHHHHhCC-CCEEEEEee-
Confidence 2348988887543 45666677643 3 78888876642 11122343 378999999
Q ss_pred CCCHHHHHHHHHHHHHHhhh
Q 013079 425 LGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 425 ~~~~~~~i~~l~~al~~~~~ 444 (450)
..+++++++.|.++|+++.+
T Consensus 375 ~~~t~~ei~~l~~~l~~~~~ 394 (398)
T TIGR03392 375 PYNTQQDVDALVDAVGAALE 394 (398)
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 88999999999999887644
No 57
>PLN02651 cysteine desulfurase
Probab=99.98 E-value=3.2e-31 Score=264.40 Aligned_cols=331 Identities=19% Similarity=0.185 Sum_probs=235.1
Q ss_pred ccCccccCC-HHHHHHhhcCCCCCCCC-CccccCCCChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHh--
Q 013079 64 ASATFTVME-PETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQL-- 137 (450)
Q Consensus 64 ~att~~~~~-~~~~~~~~~~~~~n~~~-~~~y~r~~~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l-- 137 (450)
++++++.+. .+++.+++...++||.+ .|.+++.....++++++.+++++|++ .++||+| +|+++++++.++
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~---~t~a~~~~l~~~~~ 82 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSG---ATESNNLAIKGVMH 82 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCC---HHHHHHHHHHHHHH
Confidence 455555455 48888888777889876 67777666778999999999999975 6899999 999999888665
Q ss_pred --ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHH
Q 013079 138 --CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPE 210 (450)
Q Consensus 138 --~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~ 210 (450)
.++||+|+++..+|+++...+... .+ .|+++++++.+ |++++++++ ++++++|++++++|+||.+.|+++
T Consensus 83 ~~~~~g~~vl~~~~~h~s~~~~~~~~-~~-~g~~v~~v~~~~~~~~d~~~l~~~i-~~~t~lv~v~~~~n~tG~~~~l~~ 159 (364)
T PLN02651 83 FYKDKKKHVITTQTEHKCVLDSCRHL-QQ-EGFEVTYLPVKSDGLVDLDELAAAI-RPDTALVSVMAVNNEIGVIQPVEE 159 (364)
T ss_pred hccCCCCEEEEcccccHHHHHHHHHH-Hh-cCCEEEEEccCCCCcCCHHHHHHhc-CCCcEEEEEECCCCCceecccHHH
Confidence 367899999999999987776433 23 68888888753 799999999 889999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhh---hccCC
Q 013079 211 LSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL---MLLGP 285 (450)
Q Consensus 211 I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~---~~~g~ 285 (450)
|.++|+++|+++++|++| +.+.+++.++++|+++.|.||++|++| + |+++.+++....+.....+.. ....+
T Consensus 160 I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G--~-g~l~v~~~~~~~l~p~~~g~~~~~~~~~G 236 (364)
T PLN02651 160 IGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKG--V-GALYVRRRPRVRLEPLMSGGGQERGRRSG 236 (364)
T ss_pred HHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCc--e-EEEEEcCCCCCCCCccccCCCccCCccCC
Confidence 999999999999999998 556677788899999999999987777 4 777666544333221111000 01122
Q ss_pred CchHHHHHHHHccCC----cHHHHHHHHHHHHHHHHHHHHh-C-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013079 286 TMNPKVAFELSERIP----HLGLRMKEHCHRALIFARRMKK-L-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 359 (450)
Q Consensus 286 ~~~~~~a~~~~~~~~----~l~~~~~~~~~~~~~l~~~L~~-~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 359 (450)
+++......+...++ ..+...++..++++++.+.|++ . +.++..|.-+.. ...++++|.+
T Consensus 237 T~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~--------------~~~~i~~~~~ 302 (364)
T PLN02651 237 TENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEK--------------RYPGTLNLSF 302 (364)
T ss_pred CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCccc--------------CcCCEEEEEe
Confidence 322222222111222 2333345567788888888875 3 446665531110 1345999999
Q ss_pred CCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCC----CCeEEEEeCCCCCHHHHHH
Q 013079 360 ETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS----AGLVRMSVGYLGTLDQRWS 433 (450)
Q Consensus 360 ~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~----~~~iRiS~g~~~~~~~~i~ 433 (450)
++.+ .+.+...|.. |+++.|+.|+......+ ...+.+|.. .+.||+|++ ..+++++|+
T Consensus 303 ~~~~-~~~~~~~L~~------i~v~~g~~c~~~~~~~~--------~~~~~~g~~~~~~~~~vR~S~~-~~~t~~did 364 (364)
T PLN02651 303 AYVE-GESLLMGLKE------VAVSSGSACTSASLEPS--------YVLRALGVPEEMAHGSLRLGVG-RFTTEEEVD 364 (364)
T ss_pred CCCC-HHHHHHHhCC------EEEEchhhcCCCCCCcC--------HHHHHcCCChHHhCceEEEEcC-CCCCHHHcC
Confidence 8543 5567777764 78999988876433333 334455554 378999999 888887764
No 58
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.98 E-value=1.4e-30 Score=261.35 Aligned_cols=341 Identities=17% Similarity=0.152 Sum_probs=238.1
Q ss_pred cccCccccCCH-HHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhc-
Q 013079 63 EASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLC- 138 (450)
Q Consensus 63 ~~att~~~~~~-~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~- 138 (450)
+++++++.+++ +++.+++...++||.+.|.++......++++|+.+++++|++ .++||+| +|+++++++.+++
T Consensus 5 ~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~---~t~a~~~al~~~~~ 81 (379)
T TIGR03402 5 NNATTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSG---GTESDNTAIKSALA 81 (379)
T ss_pred CcCCCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCc---HHHHHHHHHHHHHH
Confidence 34566665554 888888877788988766666556677899999999999975 5899999 9999999998764
Q ss_pred --cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHH
Q 013079 139 --SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 211 (450)
Q Consensus 139 --~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I 211 (450)
.+|++|+++..+|+++...+... .+ .|+++.+++.+ |++++++++ ++++++|++++++||||.+.|+++|
T Consensus 82 ~~~~~~~vv~~~~~~~s~~~~~~~~-~~-~G~~v~~v~~~~~g~~~~~~l~~~i-~~~~~lv~i~~~~n~tG~~~~~~~I 158 (379)
T TIGR03402 82 AQPEKRHIITTAVEHPAVLSLCQHL-EK-QGYKVTYLPVDEEGRLDLEELRAAI-TDDTALVSVMWANNETGTIFPIEEI 158 (379)
T ss_pred hcCCCCeEEEcccccHHHHHHHHHH-HH-cCCEEEEEccCCCCcCCHHHHHHhc-CCCcEEEEEEcccCCeeecccHHHH
Confidence 45689999999999887766433 23 58888888753 789999999 8899999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHH-HHHH-HHhhhhhhccCCCc
Q 013079 212 SRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLV-NSMM-DLHQGALMLLGPTM 287 (450)
Q Consensus 212 ~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~-~~l~-~~~~~~~~~~g~~~ 287 (450)
.++|+++|+++|+|++| +....+..+.++|+++.|.||++|++| + |+++.+++.. .+.. ..........| ++
T Consensus 159 ~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G--~-g~l~v~~~~~~~p~~~g~~~~~~~~~g-t~ 234 (379)
T TIGR03402 159 GEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKG--V-GALYIRKGTRFRPLLRGGHQERGRRAG-TE 234 (379)
T ss_pred HHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCc--e-EEEEECCCCCCCCcccCCccCCCcCCC-Cc
Confidence 99999999999999998 445556667799999999999888777 5 7776554321 1110 00000001122 22
Q ss_pred hHHHHH---HHHc-cCCcHHHHHHHHHHHHHHHHHHHHh-CCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013079 288 NPKVAF---ELSE-RIPHLGLRMKEHCHRALIFARRMKK-LGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 361 (450)
Q Consensus 288 ~~~~a~---~~~~-~~~~l~~~~~~~~~~~~~l~~~L~~-~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 361 (450)
+..... .++. ..+.+....++..++++++.+.|++ ++. .+..+... ..+++++|.++.
T Consensus 235 ~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~ 298 (379)
T TIGR03402 235 NVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTK----------------RLPNTVNISFEY 298 (379)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCcc----------------CCCCEEEEEecC
Confidence 211111 1111 1123444445667788888888875 543 44332210 123477777764
Q ss_pred HHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCC----CCeEEEEeCCCCCHHHHHHHHHH
Q 013079 362 EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS----AGLVRMSVGYLGTLDQRWSQFEK 437 (450)
Q Consensus 362 ~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~----~~~iRiS~g~~~~~~~~i~~l~~ 437 (450)
.+ ...+...|... | |.++.|+.|+.....++ ....++|.. .+.||+|++ ..+++++|+.+.+
T Consensus 299 ~~-~~~~~~~l~~~---g-I~v~~g~~c~~~~~~~~--------~~~~~lg~~~~~~~~~vR~S~~-~~~t~~di~~~~~ 364 (379)
T TIGR03402 299 IE-GEAILLLLDME---G-ICASSGSACTSGSLEPS--------HVLRAMGVPHTAAHGSIRFSLS-RYNTEEDIDYVLE 364 (379)
T ss_pred CC-HHHHHHhhccC---C-EEEEchhhcCCCCCCcC--------HHHHHcCCChhhcCceEEEEcC-CCCCHHHHHHHHH
Confidence 43 45677777653 3 78899988765432222 344455653 478999999 9888888888888
Q ss_pred HHHHhh
Q 013079 438 ALSRMQ 443 (450)
Q Consensus 438 al~~~~ 443 (450)
+|+++.
T Consensus 365 ~l~~~~ 370 (379)
T TIGR03402 365 VLPPII 370 (379)
T ss_pred HHHHHH
Confidence 887653
No 59
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.97 E-value=4.5e-30 Score=261.22 Aligned_cols=330 Identities=17% Similarity=0.184 Sum_probs=232.7
Q ss_pred HHHHHHhhcCCCCCCCC-CccccCCCChhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHh----ccCCCEE
Q 013079 73 PETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQL----CSSGGHV 144 (450)
Q Consensus 73 ~~~~~~~~~~~~~n~~~-~~~y~r~~~~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l----~~~gd~V 144 (450)
.+++.+++....+|+.+ .|..+.......+++|+.||+++|+ +.++||+| +|+++++++.++ +++||+|
T Consensus 49 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g---~t~al~~i~~~~~~~~~~~gd~v 125 (424)
T PLN02855 49 LDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRN---ATEAINLVAYTWGLANLKPGDEV 125 (424)
T ss_pred HHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCC---HHHHHHHHHHHhhhhcCCCcCEE
Confidence 47777877766677654 3433444445678999999999997 36899999 999999998763 5789999
Q ss_pred EEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcC
Q 013079 145 VAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKG 219 (450)
Q Consensus 145 i~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~g 219 (450)
+++.++|++....+.....+ .|+++.+++.+ |++++++++ +++|++|++++++||||.+.|+++|+++|+++|
T Consensus 126 l~~~~~~~s~~~~~~~~a~~-~g~~v~~v~~~~~~~~~~~~l~~~i-~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g 203 (424)
T PLN02855 126 ILSVAEHHSNIVPWQLVAQK-TGAVLKFVGLTPDEVLDVEQLKELL-SEKTKLVATHHVSNVLGSILPVEDIVHWAHAVG 203 (424)
T ss_pred EECCCccHHHHHHHHHHHHH-cCCEEEEEecCCCCCcCHHHHHHHh-ccCceEEEEeCccccccccCCHHHHHHHHHHcC
Confidence 99999999877666544343 68888888753 789999999 789999999999999999999999999999999
Q ss_pred CEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhh-----------------h
Q 013079 220 VTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA-----------------L 280 (450)
Q Consensus 220 i~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~-----------------~ 280 (450)
+++++|++| +...++...+++|+++.|+||++|++| + |+++.++++++.+.....+. .
T Consensus 204 ~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 280 (424)
T PLN02855 204 AKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTG--I-GFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPS 280 (424)
T ss_pred CEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCc--c-EEEEEchhhhhcCCCEecCCCceeeeecCccccCCChh
Confidence 999999998 334455556689999999999988777 5 99988887776653221100 0
Q ss_pred hccCCCchHHHHHHHHccCC-----cHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 281 MLLGPTMNPKVAFELSERIP-----HLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 281 ~~~g~~~~~~~a~~~~~~~~-----~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
....+++.....+.+...++ .+....++..++++++.+.|++++ .++..|.. ..+. ..+++
T Consensus 281 r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~-~~~~------------~r~~~ 347 (424)
T PLN02855 281 RFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKP-SEGV------------GRAAL 347 (424)
T ss_pred hccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCc-cccc------------CcccE
Confidence 01122222222211111222 233444556778888888888774 46654421 0011 23669
Q ss_pred EEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 355 LCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 355 ~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
++|.+++.. ...+.+.|... +| |.++.|..|+.. ....+|+ ++.||||++ ..+++++++.
T Consensus 348 v~~~~~~~~-~~~v~~~L~~~--~g-I~v~~g~~c~~~--------------~~~~~g~-~~~iRiS~~-~ynt~~di~~ 407 (424)
T PLN02855 348 CAFNVEGIH-PTDLSTFLDQQ--HG-VAIRSGHHCAQP--------------LHRYLGV-NASARASLY-FYNTKEEVDA 407 (424)
T ss_pred EEEEECCcC-HHHHHHHhccc--CC-EEEechhhhhHH--------------HHHHhCC-CCeEEEEec-cCCCHHHHHH
Confidence 999998543 45677777642 34 677888766521 1123454 378999999 9888888999
Q ss_pred HHHHHHHhh
Q 013079 435 FEKALSRMQ 443 (450)
Q Consensus 435 l~~al~~~~ 443 (450)
|.++|+++.
T Consensus 408 l~~~l~~~~ 416 (424)
T PLN02855 408 FIHALKDTI 416 (424)
T ss_pred HHHHHHHHH
Confidence 888887654
No 60
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.97 E-value=2.8e-30 Score=260.84 Aligned_cols=339 Identities=17% Similarity=0.149 Sum_probs=230.2
Q ss_pred ccCccccCC-HHHHHHhhcCCCCCCCC-CccccCCCChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhc-
Q 013079 64 ASATFTVME-PETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLC- 138 (450)
Q Consensus 64 ~att~~~~~-~~~~~~~~~~~~~n~~~-~~~y~r~~~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~- 138 (450)
++++++.+. .+++.+++...++||.+ .|.++......++++++.||+++|++ .++||+| +|+++++++.++.
T Consensus 10 aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g---~t~a~~~~l~~l~~ 86 (402)
T TIGR02006 10 AATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSG---ATESNNLAIKGIAH 86 (402)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCC---HHHHHHHHHHHHHH
Confidence 355555555 47777887767888864 45555555567899999999999965 6899999 9999999887653
Q ss_pred ---cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHH
Q 013079 139 ---SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPE 210 (450)
Q Consensus 139 ---~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~ 210 (450)
++||+|+++.++|+++...+... .+ .|+++.+++.+ |++++++++ ++++++|++++++||||.+.|+++
T Consensus 87 ~~~~~g~~Vi~~~~~h~s~~~~~~~~-~~-~g~~v~~v~~~~~~~~d~~~l~~~l-~~~~~lv~v~~~~n~tG~~~~~~~ 163 (402)
T TIGR02006 87 FYKSKGNHIITSKTEHKAVLDTCRYL-ER-EGFEVTYLPPKSNGLIDLEELKAAI-RDDTILVSIMHVNNEIGVIQDIAA 163 (402)
T ss_pred hhcCCCCEEEECCCccHHHHHHHHHH-Hh-cCCEEEEEccCCCCcCCHHHHHHhc-CCCCEEEEEECCCcCceecccHHH
Confidence 57899999999999988776432 33 58888888754 899999999 788999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhh----hhccC
Q 013079 211 LSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA----LMLLG 284 (450)
Q Consensus 211 I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~----~~~~g 284 (450)
|.++|+++|+++|+|+++ +...++....++|+++.|+||++|++| + |+++.+++....+.....+. ....|
T Consensus 164 I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G--~-G~l~~~~~~~~~~~~~~~g~~~~~~~~~g 240 (402)
T TIGR02006 164 IGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKG--I-GALYVRRKPRVRLEALIHGGGHERGMRSG 240 (402)
T ss_pred HHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCc--e-EEEEEccCCCCCCCceecCCCccCCccCC
Confidence 999999999999999998 445556666789999999999998777 5 66655443222221111100 00122
Q ss_pred CCchHH-HHH-HHHcc-CCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 285 PTMNPK-VAF-ELSER-IPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 285 ~~~~~~-~a~-~~~~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+..... .+. .+++. .+.+..+.++..++++++.+.|++++. .+..+.... ..+++.|.|+
T Consensus 241 t~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~----------------~p~~~~v~f~ 304 (402)
T TIGR02006 241 TLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHR----------------VPGNLNVSFN 304 (402)
T ss_pred CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCcccc----------------CCCeEEEEEe
Confidence 221111 111 12211 123455556678888888888887653 333221111 1123334444
Q ss_pred CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCC----CCeEEEEeCCCCCHHHHHHHHH
Q 013079 361 TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS----AGLVRMSVGYLGTLDQRWSQFE 436 (450)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~----~~~iRiS~g~~~~~~~~i~~l~ 436 (450)
... .+.+...++. +.++.|..|+.....+ .....++|++ .+.||+|+| ..+++++++.|.
T Consensus 305 ~~~-~~~~~~~l~~------i~v~~G~~c~~~~~~~--------~~~l~~lg~~~~~~~~~vR~S~~-~~~t~edid~l~ 368 (402)
T TIGR02006 305 YVE-GESLIMALKD------LAVSSGSACTSASLEP--------SYVLRALGINDELAHSSIRFTIG-RFTTEEEIDYAV 368 (402)
T ss_pred CcC-HHHHHHhcCC------EEEechhhcCCCCCCc--------cHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHH
Confidence 221 3345555543 6888887775432222 2334456664 478999999 888888888888
Q ss_pred HHHHHhh
Q 013079 437 KALSRMQ 443 (450)
Q Consensus 437 ~al~~~~ 443 (450)
++|.++.
T Consensus 369 ~~l~~~~ 375 (402)
T TIGR02006 369 KLVKSAI 375 (402)
T ss_pred HHHHHHH
Confidence 8887664
No 61
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=1.3e-29 Score=256.41 Aligned_cols=328 Identities=16% Similarity=0.181 Sum_probs=232.7
Q ss_pred HHHHHHhhcCCCCCCCC-CccccCCCChhHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHHHHHh----ccCCCEE
Q 013079 73 PETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE---AAYCTASDKAGMSAISSVLMQL----CSSGGHV 144 (450)
Q Consensus 73 ~~~~~~~~~~~~~n~~~-~~~y~r~~~~~~~~l~~~iA~l~g~~---~~~~tsg~~~gt~ai~~al~~l----~~~gd~V 144 (450)
.+++.++++..++||.+ .|.+++......+++++.+|+++|++ .+++|+| +++++++++.++ +++||+|
T Consensus 35 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g---~t~~l~~~~~~~~~~~~~~g~~v 111 (403)
T TIGR01979 35 IDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRG---TTESINLVAYSWGDSNLKAGDEI 111 (403)
T ss_pred HHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCC---HHHHHHHHHHHhhhhcCCCCCEE
Confidence 47777787777788764 45555555567889999999999965 5899999 999999988765 5789999
Q ss_pred EEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcC
Q 013079 145 VAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKG 219 (450)
Q Consensus 145 i~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~g 219 (450)
++++++|++....+...... .|.++++++.+ |++++++++ +++|++|++++++||||.+.|+++|.++|+++|
T Consensus 112 l~~~~~~~s~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~l~~~i-~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~ 189 (403)
T TIGR01979 112 VISEMEHHANIVPWQLLAER-TGATLKFIPLDDDGTLDLDDLEKLL-TEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVG 189 (403)
T ss_pred EECcchhhHHHHHHHHHHHh-cCcEEEEEecCCCCCCCHHHHHHHh-ccCCeEEEEEcccccccccCCHHHHHHHHHHcC
Confidence 99999999876655444333 68888888753 789999999 889999999999999999999999999999999
Q ss_pred CEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhh-----------------h
Q 013079 220 VTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA-----------------L 280 (450)
Q Consensus 220 i~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~-----------------~ 280 (450)
+++|+|++| +....+...+++|+++.|+||++|++| + |+++.++++++.+.....++ .
T Consensus 190 ~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G--~-g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 266 (403)
T TIGR01979 190 AKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTG--I-GVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPH 266 (403)
T ss_pred CEEEEEchhhcCccccCccccCCCEEEEecccccCCCC--c-eEEEEchHHHhcCCCeecCCCceeecccCccccCCChh
Confidence 999999998 333455556689999999999999777 5 89988887766553211100 0
Q ss_pred hccCCCchHHH---HHHHHccCC--cHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 281 MLLGPTMNPKV---AFELSERIP--HLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 281 ~~~g~~~~~~~---a~~~~~~~~--~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
....++++... +..++..+. ......++..++++++.+.|++++ .++..|.-+. ..+++
T Consensus 267 ~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~---------------~~~~~ 331 (403)
T TIGR01979 267 KFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAE---------------DRGGI 331 (403)
T ss_pred hcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcc---------------ccCce
Confidence 01111222221 112221111 133445566778888888888774 4665443110 13568
Q ss_pred EEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 355 LCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 355 ~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
+.|.+++.. ...+.+.|.. .| |.++.|+.|+.- ....++. ++.||||+| ..+++++++.
T Consensus 332 v~~~~~~~~-~~~~~~~L~~---~g-I~v~~g~~~~~~--------------~~~~~~~-~~~iRiS~~-~~~t~~di~~ 390 (403)
T TIGR01979 332 ISFNVEGVH-PHDVGTILDE---EG-IAVRSGHHCAQP--------------LMRRFGV-PATCRASFY-IYNTEEDIDA 390 (403)
T ss_pred EEEEeCCcC-HHHHHHHHhh---CC-EEEcchhhhhHH--------------HHHHhCC-CCEEEEEec-cCCCHHHHHH
Confidence 999987543 4556666664 33 677777655321 1112332 478999999 8888889999
Q ss_pred HHHHHHHhhh
Q 013079 435 FEKALSRMQD 444 (450)
Q Consensus 435 l~~al~~~~~ 444 (450)
|.++|+++.+
T Consensus 391 l~~~l~~~~~ 400 (403)
T TIGR01979 391 LVEALKKVRK 400 (403)
T ss_pred HHHHHHHHHH
Confidence 9998887654
No 62
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=7.8e-29 Score=250.15 Aligned_cols=244 Identities=14% Similarity=0.150 Sum_probs=184.0
Q ss_pred hHHHHHHHHHHHhC--------C-CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 100 TVLNLSRQMAALEG--------T-EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 100 ~~~~l~~~iA~l~g--------~-~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
....+|+.||++++ . +++++|+| +++++.+++.+++++||+|+++.|+|+.+...+. ..|.++
T Consensus 70 G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G---~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~-----~~G~~~ 141 (399)
T PRK07681 70 GIQEFHEAVTEYYNNTHNVILNADKEVLLLMG---SQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQ-----MAGATS 141 (399)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCeEEECCC---cHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH-----hcCCEE
Confidence 45567777777653 3 56899999 9999999999999999999999999999988775 368888
Q ss_pred EEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----
Q 013079 171 TFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP----- 235 (450)
Q Consensus 171 ~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~----- 235 (450)
..++.+ |++++++++ .+++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++.
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~~-~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~ 220 (399)
T PRK07681 142 YYMPLKKENDFLPDLELIPEEI-ADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPIS 220 (399)
T ss_pred EEEecCCCCCCcCCHHHHHHhc-cccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCC
Confidence 777653 688898888 778999999999999999987 7788999999999999999996554321
Q ss_pred -cC----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-CCcHHHHHHHH
Q 013079 236 -AR----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEH 309 (450)
Q Consensus 236 -~~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~ 309 (450)
.. ...+++++|+||.+|.+|+|+ ||+++++++++.+....... ....+.+.+.++..++.. .+++.+..+.+
T Consensus 221 ~~~~~~~~~~~i~~~S~SK~~~~~GlRi-G~~i~~~~l~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 298 (399)
T PRK07681 221 FLSVPGAKEVGVEINSLSKSYSLAGSRI-GYMIGNEEIVRALTQFKSNT-DYGVFLPIQKAACAALRNGAAFCEKNRGIY 298 (399)
T ss_pred hhhCCCCcccEEEEeecccccCCcccee-EEEecCHHHHHHHHHHHhhc-ccCCCHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 11 135789999999999999998 99999999998887665411 122333444555444443 24455555667
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013079 310 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 373 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~ 373 (450)
.++++.+.+.|+++++.+..|. .|.++|+.++.......|...+.
T Consensus 299 ~~~~~~l~~~L~~~g~~~~~p~-------------------~g~f~~~~l~~~~~~~~~~~~l~ 343 (399)
T PRK07681 299 QERRDTLVDGFRTFGWNVDKPA-------------------GSMFVWAEIPKGWTSLSFAYALM 343 (399)
T ss_pred HHHHHHHHHHHHHCCCcccCCC-------------------eeeEEEEECCCCCCHHHHHHHHH
Confidence 8888999999998765543332 46789999874323455666654
No 63
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.8e-28 Score=246.68 Aligned_cols=290 Identities=15% Similarity=0.190 Sum_probs=207.6
Q ss_pred CChhHHHHHHHHHHHhCC-----CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 97 FNPTVLNLSRQMAALEGT-----EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~-----~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
..+.++.+++.+++.+|. +.+++|+| +++++..++..++.+||+|++++|.|..+...+. ..|+++.
T Consensus 67 ~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G---~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~ 138 (389)
T PRK05957 67 IPPLLEAITQKLQQDNGIELNNEQAIVVTAG---SNMAFMNAILAITDPGDEIILNTPYYFNHEMAIT-----MAGCQPI 138 (389)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCeEEEeCC---hHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHH-----hcCCEEE
Confidence 346678888888888773 35899999 9999999999889999999999999988766553 2688888
Q ss_pred EeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------c-
Q 013079 172 FVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------A- 236 (450)
Q Consensus 172 ~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~- 236 (450)
+++.+ |++++++++ ++++++|++.+||||||.+.+ +++|+++|+++|+++|+|++|..+.++. .
T Consensus 139 ~v~~~~~~~~d~~~l~~~i-~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~ 217 (389)
T PRK05957 139 LVPTDDNYQLQPEAIEQAI-TPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGS 217 (389)
T ss_pred EeecCCCCCcCHHHHHHhc-CcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhh
Confidence 87654 789999999 788999999999999999987 8899999999999999999986554321 1
Q ss_pred ---CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-CCcHHHHHHHHHHH
Q 013079 237 ---RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHCHR 312 (450)
Q Consensus 237 ---~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~~~ 312 (450)
.....+++.|+||.+|++|+|+ ||++.++++++.+....... ....+.+.+..+...+.. ..++.+..+++.++
T Consensus 218 ~~~~~~~~i~~~S~SK~~g~~GlRi-G~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 295 (389)
T PRK05957 218 IPGSGNHTISLYSLSKAYGFASWRI-GYMVIPIHLLEAIKKIQDTI-LICPPVVSQYAALGALQVGKSYCQQHLPEIAQV 295 (389)
T ss_pred CCCccCcEEEEecchhhccCcccee-EEEecCHHHHHHHHHHHhhc-ccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 1135689999999999999998 99999999998887765411 122233445544444433 23456666678888
Q ss_pred HHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccc
Q 013079 313 ALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYET 390 (450)
Q Consensus 313 ~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s 390 (450)
++.+.+.|++++. .+..| ..|.++|++++...+..+|.+.+.. ..| +.+..|+.+.
T Consensus 296 r~~l~~~L~~~~~~~~~~~~-------------------~gg~~~~~~~~~~~~~~~~~~~l~~--~~g-v~v~pg~~f~ 353 (389)
T PRK05957 296 RQILLKSLGQLQDRCTLHPA-------------------NGAFYCFLKVNTDLNDFELVKQLIR--EYR-VAVIPGTTFG 353 (389)
T ss_pred HHHHHHHHHhcCCCccccCC-------------------CeeEEEEEeCCCCCChHHHHHHHHH--HCC-EEEccchhhC
Confidence 9999999987643 22111 2466788988743335567776632 123 5666554321
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHH---HHHHHHHHHH
Q 013079 391 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQR---WSQFEKALSR 441 (450)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~---i~~l~~al~~ 441 (450)
. ..+++||||+| ..+.+++ ++.|.+.+++
T Consensus 354 ~---------------------~~~~~iRis~~-~~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 354 M---------------------KNGCYLRIAYG-ALQKATAKEGIERLVQGLKT 385 (389)
T ss_pred C---------------------CCCCEEEEEEe-cCCHHHHHHHHHHHHHHHHh
Confidence 0 01468999999 6555444 4444444443
No 64
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.6e-28 Score=248.12 Aligned_cols=273 Identities=19% Similarity=0.203 Sum_probs=196.3
Q ss_pred ChhHHHHHHHHHHHhCC-----CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 98 NPTVLNLSRQMAALEGT-----EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~-----~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
.+.++.+.+.+++.+|. +++++|+| +++++.+++..++++||+|++++|.|+.+...+. ..|.++..
T Consensus 81 ~~LR~aia~~l~~~~g~~~~~~~~I~it~G---a~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~-----~~g~~v~~ 152 (405)
T PRK06207 81 ADIRELLAARLAAFTGAPVDAADELIITPG---TQGALFLAVAATVARGDKVAIVQPDYFANRKLVE-----FFEGEMVP 152 (405)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCEEEeCC---cHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHH-----HcCCEEEE
Confidence 34455666666666563 56899999 9999999999999999999999999999887775 25666666
Q ss_pred eCCC----------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-----
Q 013079 173 VDIS----------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS----- 234 (450)
Q Consensus 173 v~~~----------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~----- 234 (450)
++.+ |+++|++++ ++++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++
T Consensus 153 v~~~~~~~~~~~~~d~~~l~~~~-~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~ 231 (405)
T PRK06207 153 VQLDYLSADKRAGLDLDQLEEAF-KAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYT 231 (405)
T ss_pred EeccccCcccCCCcCHHHHHHhh-hhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCC
Confidence 5532 789999988 778999999999999999986 778899999999999999999665431
Q ss_pred -ccC----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccC-CcHHHHHHH
Q 013079 235 -PAR----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKE 308 (450)
Q Consensus 235 -~~~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~ 308 (450)
... .+..+++.|+||.++.+|+|+ ||+++++++++.+....... ....+.+.+.++..++... .++..++++
T Consensus 232 ~~~~~~~~~~~vi~i~SfSK~~~lpGlRi-G~ii~~~~l~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~ 309 (405)
T PRK06207 232 HLRALPIDPENVITIMGPSKTESLSGYRL-GVAFGSPAIIDRMEKLQAIV-SLRAAGYSQAVLRTWFSEPDGWMKDRIAR 309 (405)
T ss_pred chhcCCCCcCcEEEEecchhhccCcccce-EEEEcCHHHHHHHHHHHhHh-ccCCCHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 111 245699999999999999998 99999999998887765421 1222333444444444322 346667777
Q ss_pred HHHHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-HHHHHHHHHhhccccccccccccc
Q 013079 309 HCHRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-EKANRLMNYLQNYAQFGFMAVSLG 386 (450)
Q Consensus 309 ~~~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-~~~~~~~~~l~~~~~~g~i~vs~G 386 (450)
+.++++.+.+.|+++ +..+..|. .|.++|++++.. .....|...+.. +.| +.+..|
T Consensus 310 ~~~~r~~l~~~L~~~~~~~~~~p~-------------------gg~fl~~~l~~~~~~~~~~~~~l~~--~~g-V~v~pG 367 (405)
T PRK06207 310 HQAIRDDLLRVLRGVEGVFVRAPQ-------------------AGSYLFPRLPRLAVSLHDFVKILRL--QAG-VIVTPG 367 (405)
T ss_pred HHHHHHHHHHHHhcCCCceecCCC-------------------eeEEEEEeCcccCCCHHHHHHHHHH--hcC-EEEeCc
Confidence 788888899999876 33433232 467899998741 224567776642 123 455555
Q ss_pred cccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC
Q 013079 387 YYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL 425 (450)
Q Consensus 387 ~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~ 425 (450)
+.+. +..++++|||++ .
T Consensus 368 ~~F~---------------------~~~~~~~Ris~~-~ 384 (405)
T PRK06207 368 TEFS---------------------PHTADSIRLNFS-Q 384 (405)
T ss_pred hHhC---------------------CCCCCeEEEEec-C
Confidence 3210 012478999999 6
No 65
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=3.4e-29 Score=250.68 Aligned_cols=329 Identities=18% Similarity=0.199 Sum_probs=233.3
Q ss_pred cCccccCC-HHHHHHhhcCCCCCCCC-CccccCCCChhHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHHHHHhcc
Q 013079 65 SATFTVME-PETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE---AAYCTASDKAGMSAISSVLMQLCS 139 (450)
Q Consensus 65 att~~~~~-~~~~~~~~~~~~~n~~~-~~~y~r~~~~~~~~l~~~iA~l~g~~---~~~~tsg~~~gt~ai~~al~~l~~ 139 (450)
+++++.+. .+.+.+++...++||.+ .|.++........++++.+++++|.+ .+++|+| +++++++++.++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g---~t~a~~~~~~~l~~ 83 (373)
T cd06453 7 ATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRN---TTEAINLVAYGLGR 83 (373)
T ss_pred cccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCC---HHHHHHHHHHHhhh
Confidence 34444444 48888888888888765 56666555667889999999999976 6899999 99999999999877
Q ss_pred ---CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHH
Q 013079 140 ---SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 211 (450)
Q Consensus 140 ---~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I 211 (450)
+||+|++++++|++....+...... .|.++++++.+ |++++++++ .+++++|++++++||||.+.|+++|
T Consensus 84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~d~~~l~~~l-~~~~~~v~~~~~~~~tG~~~~~~~i 161 (373)
T cd06453 84 ANKPGDEIVTSVMEHHSNIVPWQQLAER-TGAKLKVVPVDDDGQLDLEALEKLL-TERTKLVAVTHVSNVLGTINPVKEI 161 (373)
T ss_pred cCCCCCEEEECcchhHHHHHHHHHHHhh-cCcEEEEeecCCCCCcCHHHHHHHh-cCCceEEEEeCcccccCCcCCHHHH
Confidence 8999999999999876554333333 68888888764 899999999 7799999999999999999999999
Q ss_pred HHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhh---------
Q 013079 212 SRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL--------- 280 (450)
Q Consensus 212 ~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~--------- 280 (450)
.++|+++|+++|+|+++ +....+....++|+++.|++|+++++| + |+++.++++++.+.....+..
T Consensus 162 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g--~-g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 238 (373)
T cd06453 162 GEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTG--I-GVLYGKEELLEEMPPYGGGGEMIEEVSFEE 238 (373)
T ss_pred HHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCC--c-EEEEEchHHhhcCCCeecCCCccccccccc
Confidence 99999999999999998 333334445689999999999999855 5 899888888776654321110
Q ss_pred --------hccCCCchHH---HHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhc
Q 013079 281 --------MLLGPTMNPK---VAFELSERI--PHLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMAN 346 (450)
Q Consensus 281 --------~~~g~~~~~~---~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~ 346 (450)
.....++... +...++..+ ..+..+.++..++++++.+.|++++ .++..+. .
T Consensus 239 ~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~------------- 304 (373)
T cd06453 239 TTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDA-E------------- 304 (373)
T ss_pred cccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCc-c-------------
Confidence 0111122211 111112111 2344555666788888999998875 3544221 0
Q ss_pred cCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCC
Q 013079 347 KEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLG 426 (450)
Q Consensus 347 ~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~ 426 (450)
..+++++|.+++. ...++.+.|... | +.++.|+.|+.- ....+|. .+.||||+| ..
T Consensus 305 ---~~~~~~~~~~~~~-~~~~i~~~l~~~---g-i~i~~g~~~~~~--------------~~~~~~~-~~~iRis~~-~~ 360 (373)
T cd06453 305 ---DRAGVVSFNLEGI-HPHDVATILDQY---G-IAVRAGHHCAQP--------------LMRRLGV-PGTVRASFG-LY 360 (373)
T ss_pred ---ccCCeEEEEECCc-CHHHHHHHHHHC---C-EEeccCccchhH--------------HHHHhCC-CCeEEEEec-CC
Confidence 2356899998753 245677776642 3 556666544321 1112332 478999999 98
Q ss_pred CHHHHHHHHHHHH
Q 013079 427 TLDQRWSQFEKAL 439 (450)
Q Consensus 427 ~~~~~i~~l~~al 439 (450)
++++.++.|.++|
T Consensus 361 ~t~~di~~~~~~l 373 (373)
T cd06453 361 NTEEEIDALVEAL 373 (373)
T ss_pred CCHHHHHHHHhhC
Confidence 9999999988764
No 66
>PRK07324 transaminase; Validated
Probab=99.97 E-value=1.4e-28 Score=245.97 Aligned_cols=250 Identities=17% Similarity=0.178 Sum_probs=185.3
Q ss_pred ccccCCCChhHHHHHHHHHHHhC---CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccC
Q 013079 91 FIYSRHFNPTVLNLSRQMAALEG---TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACN 167 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~g---~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g 167 (450)
+.|+.. ....+||+.||++++ ++++++|+| +++|+.+++.+++.+||+|+++.|.|..+...+. ..|
T Consensus 56 ~~Y~~~--~G~~~lr~~ia~~~~~~~~~~vi~t~G---~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~-----~~g 125 (373)
T PRK07324 56 LTYGWI--EGSPEFKEAVASLYQNVKPENILQTNG---ATGANFLVLYALVEPGDHVISVYPTYQQLYDIPE-----SLG 125 (373)
T ss_pred ccCCCC--CCCHHHHHHHHHHhcCCChhhEEEcCC---hHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-----HcC
Confidence 345542 234579999999874 467899999 9999999999999999999999999998877664 367
Q ss_pred eeEEEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc--
Q 013079 168 ITTTFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-- 235 (450)
Q Consensus 168 ~~v~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-- 235 (450)
.++++++.+ |++++++++ ++++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++.
T Consensus 126 ~~v~~v~~~~~~~~~~d~~~l~~~~-~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~ 204 (373)
T PRK07324 126 AEVDYWQLKEENGWLPDLDELRRLV-RPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGST 204 (373)
T ss_pred CEEEEEecccccCCCCCHHHHHHhC-CCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCC
Confidence 788777642 788998888 789999999999999999988 8899999999999999999996654421
Q ss_pred ---cCC-CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCc-HHHHHHHHH
Q 013079 236 ---ARL-GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPH-LGLRMKEHC 310 (450)
Q Consensus 236 ---~~~-g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~-l~~~~~~~~ 310 (450)
.+. +..+++.|+||.+|++|+|+ ||+++++++++.+...+.. .....+.+.+..+..++...+. +....+.++
T Consensus 205 ~s~~~~~~~~I~~~s~SK~~~~~G~Ri-G~i~~~~~li~~~~~~~~~-~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~ 282 (373)
T PRK07324 205 PSIADLYEKGISTNSMSKTYSLPGIRV-GWIAANEEVIDILRKYRDY-TMICAGVFDDMLASLALEHRDAILERNRKIVR 282 (373)
T ss_pred CChhhccCCEEEEecchhhcCCcccee-EEEecCHHHHHHHHHHhCc-EEecCChHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 111 35688999999999999999 9999999999998877652 2233445555555555443322 333344467
Q ss_pred HHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHh
Q 013079 311 HRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYL 372 (450)
Q Consensus 311 ~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l 372 (450)
++++.+.+.|++++. .+..|. .|..+++.++.......|.+++
T Consensus 283 ~~~~~l~~~l~~~~~~~~~~p~-------------------gg~~~~i~~~~~~~~~~~~~~l 326 (373)
T PRK07324 283 TNLAILDEWVAKEPRVSYVKPK-------------------AVSTSFVKLDVDMPSEDFCLKL 326 (373)
T ss_pred HHHHHHHHHHhcCCCceEECCC-------------------ceEEEEEEeCCCCCHHHHHHHH
Confidence 788888888887643 444443 3445666665222345676665
No 67
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.9e-28 Score=247.40 Aligned_cols=286 Identities=17% Similarity=0.162 Sum_probs=204.8
Q ss_pred hhHHHHHHHHHHHh----C-----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCe
Q 013079 99 PTVLNLSRQMAALE----G-----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI 168 (450)
Q Consensus 99 ~~~~~l~~~iA~l~----g-----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~ 168 (450)
.....+++.+|+++ | ++ ++++|+| +++++..++.+++++||+|+++.|.|+.+...++ ..|.
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~G---s~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~g~ 152 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIG---SKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTK-----YYGG 152 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccC---HHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHH-----HcCC
Confidence 34566777777764 3 23 5899999 9999999999999999999999999999888775 3677
Q ss_pred eEEEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC----
Q 013079 169 TTTFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS---- 234 (450)
Q Consensus 169 ~v~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~---- 234 (450)
++..++.+ |++++++++ .+++++|++++||||||.+.+ +++|+++|+++|++||+|++|..+.++
T Consensus 153 ~v~~v~~~~~~~~~~d~~~l~~~~-~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~ 231 (410)
T PRK06290 153 EVYNLPLLEENNFLPDLDSIPKDI-KEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPL 231 (410)
T ss_pred EEEEEecCCCcCCcCCHHHHHHhh-cccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCc
Confidence 77777653 788888888 778999999999999999987 678888899999999999999554321
Q ss_pred -ccC----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHH
Q 013079 235 -PAR----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEH 309 (450)
Q Consensus 235 -~~~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~ 309 (450)
... .+.+++++|+||.+|++|+|+ ||+++++++++.+....... ......+.+.++..++...+++....+++
T Consensus 232 s~~~~~~~~~~~I~i~SfSK~~g~~GlRi-G~ii~~~~l~~~l~~~~~~~-~~~~~~~~q~aa~~~l~~~~~~~~~~~~~ 309 (410)
T PRK06290 232 SFLSVPGAKEVGVEIHSLSKAYNMTGWRL-AFVVGNELIVKAFATVKDNN-DSGQFIAIQKAGIYALDHPEITEKIREKY 309 (410)
T ss_pred ChhcCCCccccEEEEeechhhcCCchhhe-EeEEeCHHHHHHHHHHHhcc-ccCCcHHHHHHHHHHhhCcHHHHHHHHHH
Confidence 111 146799999999999999999 99999999998887665421 11122344555544544444455566677
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-------HHHHHHHHHhhccccccccc
Q 013079 310 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-------EKANRLMNYLQNYAQFGFMA 382 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-------~~~~~~~~~l~~~~~~g~i~ 382 (450)
.++++.+.+.|+++++.+..|. .|.++|+.++.. ....+|.+.|...+ + +.
T Consensus 310 ~~~~~~l~~~L~~~g~~~~~p~-------------------g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~--~-v~ 367 (410)
T PRK06290 310 SRRLDKLVKILNEVGFKAEMPG-------------------GTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEK--L-IS 367 (410)
T ss_pred HHHHHHHHHHHHhCCCeecCCC-------------------eeeEEEEECCCccccCCCCCCHHHHHHHHHHhC--C-EE
Confidence 8889999999998876544332 355778888732 13556777765421 1 22
Q ss_pred cccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC----CCCHHHHHHHHHHHHHHh
Q 013079 383 VSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY----LGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 383 vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~----~~~~~~~i~~l~~al~~~ 442 (450)
+-.| .. ..+++||++++ .++.+++++.|.++|.++
T Consensus 368 ~~p~----------~~---------------~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 368 TVPW----------DD---------------AGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred EECC----------cc---------------ccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 1111 10 02689999983 355666666666666554
No 68
>PRK12414 putative aminotransferase; Provisional
Probab=99.97 E-value=4.5e-28 Score=243.32 Aligned_cols=219 Identities=18% Similarity=0.230 Sum_probs=168.4
Q ss_pred hhHHHHHHHHHHHhCC-----CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 99 PTVLNLSRQMAALEGT-----EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~-----~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
+.++.+++.+++++|. +.+++|+| +++++.+++++++.+||+|+++.|+|..+...+. ..|.++..+
T Consensus 70 ~lr~~ia~~l~~~~g~~~~~~~~i~it~g---~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~v 141 (384)
T PRK12414 70 ALREALAEKTERLYGARYDPASEVTVIAS---ASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVR-----LQGATPVAI 141 (384)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEECC---hHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHH-----HcCCEEEEE
Confidence 4556666666677675 35899999 9999999999999999999999999998877765 256666666
Q ss_pred CCC------CHHHHHHhhhcCCceEEEEecCCCCccccc---CHHHHHHHHHhcCCEEEEeCCCCCCCCC-----c-cC-
Q 013079 174 DIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTFSPLVLS-----P-AR- 237 (450)
Q Consensus 174 ~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~~~~~~~-----~-~~- 237 (450)
+.+ |++.|++++ ++++++|++++||||||.+. ++++|+++|+++|+++|+|++|..+.++ + ..
T Consensus 142 ~~~~~~~~~d~~~l~~~l-~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 220 (384)
T PRK12414 142 KLSPEDFRVNWDEVAAAI-TPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARH 220 (384)
T ss_pred ecCccccccCHHHHHhhc-CcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccC
Confidence 543 789999988 77899999999999999985 5788899999999999999999655432 1 11
Q ss_pred ---CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013079 238 ---LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRAL 314 (450)
Q Consensus 238 ---~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 314 (450)
.+..+++.|+||.+|.+|+|+ ||+++++++++.+...... .....+.+.+.++..++..........+.++++++
T Consensus 221 ~~~~~~~i~~~SfSK~~~~pGlRi-G~~v~~~~l~~~l~~~~~~-~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~ 298 (384)
T PRK12414 221 RELAERSVIVSSFGKSYHVTGWRV-GYCLAPAELMDEIRKVHQF-MVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRD 298 (384)
T ss_pred cCccCcEEEEecccccccCccceE-EEEecCHHHHHHHHHHHhh-eecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 135699999999999999999 9999999999888776541 12334555565555555443333344456788899
Q ss_pred HHHHHHHhCCCeee
Q 013079 315 IFARRMKKLGLKVL 328 (450)
Q Consensus 315 ~l~~~L~~~~~~v~ 328 (450)
.+.+.|++++..+.
T Consensus 299 ~l~~~L~~~g~~~~ 312 (384)
T PRK12414 299 LLARELAGSRFELL 312 (384)
T ss_pred HHHHHHHhCCCeec
Confidence 99999998765543
No 69
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=5.7e-28 Score=244.43 Aligned_cols=243 Identities=19% Similarity=0.219 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 101 VLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
..+||+.+|+++ | .+ .+++|+| +++|+.+++.+++++||+|++++|.|+.+...+. ..|.++.
T Consensus 93 ~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G---~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~ 164 (413)
T PLN00175 93 VPELNSAIAERFKKDTGLVVDPEKEVTVTSG---CTEAIAATILGLINPGDEVILFAPFYDSYEATLS-----MAGAKIK 164 (413)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEeCC---HHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHH-----HcCCEEE
Confidence 445666666554 3 23 5889999 9999999999999999999999999999887775 3577777
Q ss_pred EeCCC------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cC
Q 013079 172 FVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----AR 237 (450)
Q Consensus 172 ~v~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~~ 237 (450)
.++.+ |+++|++++ .+++++|++++||||||.+.+ +++|+++|+++++++|+|++|..+.++. ..
T Consensus 165 ~v~~~~~~~~~~~~~l~~~~-~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~ 243 (413)
T PLN00175 165 TVTLRPPDFAVPEDELKAAF-TSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMAS 243 (413)
T ss_pred EEECCcccCCCCHHHHHHhc-CcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhh
Confidence 77643 688999988 778999999999999999975 7789999999999999999996654321 11
Q ss_pred ----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccC-CcHHHHHHHHHHH
Q 013079 238 ----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCHR 312 (450)
Q Consensus 238 ----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~~ 312 (450)
.+..++++|+||.++.+|+|+ ||+++++++++.+...... .....+.+.+.++..++... .++....+++.++
T Consensus 244 ~~~~~~~vi~i~SfSK~~~~~G~Ri-G~~v~~~~l~~~l~~~~~~-~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~ 321 (413)
T PLN00175 244 LPGMYERTVTMNSLGKTFSLTGWKI-GWAIAPPHLTWGVRQAHSF-LTFATATPMQWAAVAALRAPESYYEELKRDYSAK 321 (413)
T ss_pred CCCCcCcEEEEecchhhccCcchhe-eeeEeCHHHHHHHHHHHhh-ccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 146799999999999999999 9999999999888766541 12334445555555555433 3455566678889
Q ss_pred HHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--CHHHHHHHHHHhh
Q 013079 313 ALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--TEEKANRLMNYLQ 373 (450)
Q Consensus 313 ~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--~~~~~~~~~~~l~ 373 (450)
++.+.+.|++++..+..|. .|.++++.+. +......|...|.
T Consensus 322 ~~~l~~~L~~~g~~~~~p~-------------------g~~f~~~~~~~~~~~~~~~~~~~ll 365 (413)
T PLN00175 322 KDILVEGLKEVGFKVYPSS-------------------GTYFVMVDHTPFGFENDIAFCEYLI 365 (413)
T ss_pred HHHHHHHHHHCCCeecCCC-------------------eeEEEEEeccccCCCCHHHHHHHHH
Confidence 9999999998866544332 3557888874 2212456666653
No 70
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.97 E-value=6.4e-29 Score=248.51 Aligned_cols=328 Identities=20% Similarity=0.223 Sum_probs=235.7
Q ss_pred ccCccccCC-HHHHHHhhcCCCCCCC-CCccccCCCChhHHHHHHHHHHHhCCCe---EEEecChHHHHHHHHHHHHHh-
Q 013079 64 ASATFTVME-PETMRRMFAGELGPDR-DFFIYSRHFNPTVLNLSRQMAALEGTEA---AYCTASDKAGMSAISSVLMQL- 137 (450)
Q Consensus 64 ~att~~~~~-~~~~~~~~~~~~~n~~-~~~~y~r~~~~~~~~l~~~iA~l~g~~~---~~~tsg~~~gt~ai~~al~~l- 137 (450)
+++++..+. .+++.+.+...++||. +.+.+++.....++++++.+|+++|++. ++|++| +|++++.++.++
T Consensus 6 ~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~---~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 6 AGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSN---GTEALNAVASSLL 82 (371)
T ss_dssp SSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESS---HHHHHHHHHHHHH
T ss_pred CCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccc---cchhhhhhhhccc
Confidence 455555555 4888888888888883 4455666667888999999999999765 799999 999999999998
Q ss_pred --ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHH
Q 013079 138 --CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPE 210 (450)
Q Consensus 138 --~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~ 210 (450)
+++|++|++++.+|++....+.....+ .|.++++++.+ |++++++++ ++++++|++.+.+|.+|.+.|+++
T Consensus 83 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~-~g~~v~~i~~~~~~~~~~~~~~~~l-~~~~~lv~~~~~~~~tG~~~pi~~ 160 (371)
T PF00266_consen 83 NPLKPGDEVLVTSNEHPSNRYPWEEIAKR-KGAEVRVIPADPGGSLDLEDLEEAL-NPDTRLVSISHVENSTGVRNPIEE 160 (371)
T ss_dssp HHGTTTCEEEEEESSHHHHHHHHHHHHHH-TTEEEEEEEEGTTSSCSHHHHHHHH-HTTESEEEEESBETTTTBBSSHHH
T ss_pred ccccccccccccccccccccccccccccc-chhhhccccccccchhhhhhhhhhh-ccccceEEeecccccccEEeeece
Confidence 789999999999999999777655444 68888887643 899999999 799999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhh----------
Q 013079 211 LSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG---------- 278 (450)
Q Consensus 211 I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~---------- 278 (450)
|.++||++|+++++|.++ +...++..++++|++++|.+|++||+| + |+++.+++.++++.....+
T Consensus 161 I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G--~-g~l~v~~~~~~~~~p~~~~~~~~~~~~~~ 237 (371)
T PF00266_consen 161 IAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPG--L-GFLYVRPEAIERLRPAKPGGGYLDFPSLQ 237 (371)
T ss_dssp HHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSST--E-EEEEEEHHHHHHHHTSSSSSSTTTHHHHH
T ss_pred ehhhhhccCCceeEechhccccccccccccccceeeecccccCCCCc--h-hhheehhhhhhccccccccccccccccch
Confidence 999999999999999998 666677778899999999999777777 5 8998888888777322110
Q ss_pred -------hhhccCCCchHHHHHHHHccCCc-----HHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHh
Q 013079 279 -------ALMLLGPTMNPKVAFELSERIPH-----LGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMA 345 (450)
Q Consensus 279 -------~~~~~g~~~~~~~a~~~~~~~~~-----l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~ 345 (450)
.....+++++......+...++. ++...++..++.+++.+.|.+++. .+..|...
T Consensus 238 ~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~------------ 305 (371)
T PF00266_consen 238 EYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDE------------ 305 (371)
T ss_dssp HHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCG------------
T ss_pred hcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeeccc------------
Confidence 01122334333322222122222 233445568888899999999876 44443211
Q ss_pred ccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC
Q 013079 346 NKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL 425 (450)
Q Consensus 346 ~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~ 425 (450)
...+++++|.+++.+ ...+...|...+ |.++.|..|.... ... .+. .+.||+|++ .
T Consensus 306 ---~~~~~i~~~~~~~~~-~~~~~~~L~~~~----I~~~~G~~~~~~~------------~~~--~~~-~~~iRvS~~-~ 361 (371)
T PF00266_consen 306 ---PRRPSIVSFNLPGSD-ADDVVKYLEERG----IAVSTGSACAGPS------------LDI--LGM-GGVIRVSLH-Y 361 (371)
T ss_dssp ---GBGTTEEEEEETTSS-HHHHHHHHHHHT----EEEEESTTTCHHH------------HHH--HHT-TTEEEEE-G-T
T ss_pred ---ccccceEEEeecCCC-HHHHHHHHhhcC----EEEeccCcccHHH------------HHH--hCC-CCEEEEecc-C
Confidence 135779999998543 355555555422 6777787665110 011 112 289999999 9
Q ss_pred CCHHHHHHHH
Q 013079 426 GTLDQRWSQF 435 (450)
Q Consensus 426 ~~~~~~i~~l 435 (450)
.++++++++|
T Consensus 362 ~nt~~dv~~l 371 (371)
T PF00266_consen 362 YNTEEDVDRL 371 (371)
T ss_dssp TSSHHHHHHH
T ss_pred CCCHHHHhhC
Confidence 9999998876
No 71
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=3.7e-28 Score=243.37 Aligned_cols=283 Identities=15% Similarity=0.144 Sum_probs=205.7
Q ss_pred CCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 96 HFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
+..+...+||+.||++++. +.+++|+| +++++.+++..++++||+|++++|.|+.+...+. ..|.++..+
T Consensus 83 Yp~~~~~~lr~~ia~~~~~~~~~I~~t~G---a~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~-----~~g~~~~~v 154 (380)
T PLN03026 83 YPDPESRRLRAALAEDSGLESENILVGCG---ADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAA-----VNGAEVIKV 154 (380)
T ss_pred CCCCCHHHHHHHHHHHhCcChhhEEEcCC---HHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHH-----HcCCEEEEe
Confidence 3445578899999999985 45899999 9999999999999999999999999987776554 267788777
Q ss_pred CCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc------cCCCCeE
Q 013079 174 DIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP------ARLGADV 242 (450)
Q Consensus 174 ~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~------~~~g~di 242 (450)
+.+ |++++++++.++++++|++++||||||.+.+.+++.++++.. +++|+|++|..+.... ...+..+
T Consensus 155 ~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~vi 233 (380)
T PLN03026 155 PRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLI 233 (380)
T ss_pred ecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEE
Confidence 653 788998887456899999999999999999999999999865 8999999995553221 1225789
Q ss_pred EEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013079 243 VVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 243 ~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
+++|+||.+|++|+|+ ||+++++++++.+...+.. ...+.+.+.++..++...+++.+..+++.++++++.+.|++
T Consensus 234 v~~SfSK~~glaGlRi-Gy~~~~~~~i~~l~~~~~~---~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~ 309 (380)
T PLN03026 234 VLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKE 309 (380)
T ss_pred EEecchHhhcCccccc-eeeecCHHHHHHHHHhcCC---CCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999888766542 22233444454444443344555566678888999999998
Q ss_pred CCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCC
Q 013079 323 LGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSE 402 (450)
Q Consensus 323 ~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~ 402 (450)
++.....|. .|+++++.++.......|.+.|... | +.+..++. +
T Consensus 310 ~~~~~~~p~-------------------~~~f~~~~~~~~~~~~~~~~~l~~~---g-I~v~~~~~------~------- 353 (380)
T PLN03026 310 VPFLEPYPS-------------------DANFILCRVTSGRDAKKLKEDLAKM---G-VMVRHYNS------K------- 353 (380)
T ss_pred CCCCeECCC-------------------CCeEEEEECCCCCCHHHHHHHHHHC---C-eEEEECCC------C-------
Confidence 764222332 4668999887322245676666542 2 44443211 0
Q ss_pred CCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 403 LNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 403 ~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
+ .+++||||+| . .+..+.|.++|++
T Consensus 354 ---------~-~~~~lRis~~-~---~~~~~~l~~al~~ 378 (380)
T PLN03026 354 ---------E-LKGYIRVSVG-K---PEHTDALMEALKQ 378 (380)
T ss_pred ---------C-CCCEEEEecC-C---HHHHHHHHHHHHH
Confidence 1 1478999999 4 2334555555543
No 72
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.97 E-value=2.3e-28 Score=233.01 Aligned_cols=242 Identities=23% Similarity=0.287 Sum_probs=190.8
Q ss_pred CCccccC-CC-ChhHHHHHHHHHHHhCC-----CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHh
Q 013079 89 DFFIYSR-HF-NPTVLNLSRQMAALEGT-----EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHF 161 (450)
Q Consensus 89 ~~~~y~r-~~-~~~~~~l~~~iA~l~g~-----~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~ 161 (450)
+.+.|+| ++ .+.++.|++.+++++|. +++++|+| +.+|+..++++++.+||+||+.+|.|.+|.....
T Consensus 61 ~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~G---A~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~-- 135 (420)
T KOG0257|consen 61 STNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAG---ANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVV-- 135 (420)
T ss_pred hhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecC---chHHHHHHHHHHcCCCCEEEEecCcchhhhhHHh--
Confidence 4456665 23 35678888899987763 45899999 9999999999999999999999999999998875
Q ss_pred CCCccCeeEEEeCCC-------------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEe
Q 013079 162 FPRACNITTTFVDIS-------------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 162 ~~~~~g~~v~~v~~~-------------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD 225 (450)
+.|...++++.. |.++++.++ +++||+|++++||||||.+.+ |++|+++|++||+++|+|
T Consensus 136 ---maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~-t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisD 211 (420)
T KOG0257|consen 136 ---MAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKI-TEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISD 211 (420)
T ss_pred ---hcCCcceeeccccccccccCccccCChHHHHhhc-cCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEh
Confidence 466666666542 899999999 999999999999999999965 889999999999999999
Q ss_pred CCCCCCCCCccC----------CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHH
Q 013079 226 NTFSPLVLSPAR----------LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFEL 295 (450)
Q Consensus 226 ~~~~~~~~~~~~----------~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~ 295 (450)
++|..+.+++.+ ....+-++|++|.+|..|||+ ||+++++.++..+....+.. .+..+++.+.+...+
T Consensus 212 evYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrl-GW~igp~~L~~~~~~vh~~~-~~~~~Tp~q~A~a~a 289 (420)
T KOG0257|consen 212 EVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRL-GWAIGPKHLYSALFPVHQNF-VFTCPTPIQEASAAA 289 (420)
T ss_pred hHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeee-eeeechHHhhhhHHHHhhcc-ccccCcHHHHHHHHH
Confidence 999666555432 247899999999999999999 99999888888887766632 233344444443332
Q ss_pred Hc-cC--------CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 296 SE-RI--------PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 296 ~~-~~--------~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
.. .+ .......+.++++++.|.+.|.+++.++..|. .+.+++.+++
T Consensus 290 ~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~-------------------gayyl~adfs 344 (420)
T KOG0257|consen 290 FALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPE-------------------GAYYLWADFS 344 (420)
T ss_pred HhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-------------------CceEEEEecc
Confidence 22 11 22334667789999999999999988887665 4568888887
No 73
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2e-27 Score=238.63 Aligned_cols=244 Identities=19% Similarity=0.181 Sum_probs=177.5
Q ss_pred hhHHHHHHHHHHHhC----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 99 PTVLNLSRQMAALEG----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
+.++.+.+.+.+.+| .+++++|+| +++++.+++..++++||+|++++|.|+.+...+. ..|.++..++
T Consensus 65 ~lr~~la~~~~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-----~~g~~~~~v~ 136 (382)
T PRK06108 65 ELREALARYVSRLHGVATPPERIAVTSS---GVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPK-----ILGARVVCVP 136 (382)
T ss_pred HHHHHHHHHHHHHhCCCcCcceEEEeCC---hHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHH-----HCCCEEEEee
Confidence 334444444444445 367899999 9999999999999999999999999998887764 3677877776
Q ss_pred CC--------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-----c--c
Q 013079 175 IS--------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS-----P--A 236 (450)
Q Consensus 175 ~~--------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~-----~--~ 236 (450)
.+ |++++++++ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.+. + .
T Consensus 137 ~~~~~~~~~~d~~~l~~~~-~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 215 (382)
T PRK06108 137 LDFGGGGWTLDLDRLLAAI-TPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFL 215 (382)
T ss_pred CCCCCCCccCCHHHHHHhc-CccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHh
Confidence 52 688999988 778999999999999999865 678999999999999999998555332 0 1
Q ss_pred C----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-CCcHHHHHHHHHH
Q 013079 237 R----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHCH 311 (450)
Q Consensus 237 ~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~~ 311 (450)
. .+.++++.|+||.+|++|+|+ ||+++++++++.+..... ......+.+.+.++..++.. .+++.+..+++.+
T Consensus 216 ~~~~~~~~~i~~~S~SK~~g~~G~Ri-G~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 293 (382)
T PRK06108 216 DIAEPDDRIIFVNSFSKNWAMTGWRL-GWLVAPPALGQVLEKLIE-YNTSCVAQFVQRAAVAALDEGEDFVAELVARLRR 293 (382)
T ss_pred hcCCCcCCEEEEeechhhccCcccce-eeeeCCHHHHHHHHHHHH-hcccCCChHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 1 135799999999999999998 999999999888876543 11122334444444444443 2345556667788
Q ss_pred HHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHh
Q 013079 312 RALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYL 372 (450)
Q Consensus 312 ~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l 372 (450)
+++.+.+.|++++ ..+..|. .|.++++.++.......|.+.|
T Consensus 294 ~~~~l~~~L~~~~~~~~~~p~-------------------~g~~~~~~l~~~~~~~~~~~~l 336 (382)
T PRK06108 294 SRDHLVDALRALPGVEVAKPD-------------------GAMYAFFRIPGVTDSLALAKRL 336 (382)
T ss_pred HHHHHHHHHHhCCCCcccCCC-------------------eeEEEEEeCCCCCCHHHHHHHH
Confidence 8889999998763 3433221 3557788887432345666665
No 74
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=6.6e-28 Score=237.39 Aligned_cols=281 Identities=11% Similarity=0.105 Sum_probs=194.9
Q ss_pred ccCCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 93 YSRHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 93 y~r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
..+|..+...+|+++||+++|. +.+++|+| +++++.+++. ++.+| .|++.+|+|+.+...++ ..|.++
T Consensus 34 ~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~G---s~~~l~~~~~-~~~~~-~vv~~~P~y~~y~~~~~-----~~G~~v 103 (332)
T PRK06425 34 ISIYPEISYTDIEDQIKIYTQGLKIKVLIGPG---LTHFIYRLLS-YINVG-NIIIVEPNFNEYKGYAF-----THGIRI 103 (332)
T ss_pred cccCcCcCHHHHHHHHHHHhCCCcceEEECCC---HHHHHHHHHH-HhCCC-cEEEeCCChHHHHHHHH-----HcCCeE
Confidence 4567788899999999999986 45899999 9999999986 56776 57777999999988875 368888
Q ss_pred EEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc----c----CCC
Q 013079 171 TFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP----A----RLG 239 (450)
Q Consensus 171 ~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~----~----~~g 239 (450)
..++.++.+...+.+...++++|++++||||||.+.+ +++|+++|+++++++|+||+|..+..+. . ..+
T Consensus 104 ~~vp~~~~~~~~~~l~~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~ 183 (332)
T PRK06425 104 SALPFNLINNNPEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYG 183 (332)
T ss_pred EEEeCCcccCcHHHHhhcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCC
Confidence 8887642111122332347899999999999999977 5677888899999999999996664321 1 124
Q ss_pred CeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHc-cCCc-HHHHHHHHHHHHHHHH
Q 013079 240 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE-RIPH-LGLRMKEHCHRALIFA 317 (450)
Q Consensus 240 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-~~~~-l~~~~~~~~~~~~~l~ 317 (450)
..++++|+||.+|++|+|+ ||+++++++++.+..... ... .+..++..+.. ..+. +....+.++++++.+.
T Consensus 184 ~vi~~~SfSK~~~l~GlRi-Gy~v~~~~li~~l~~~~~----~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~ 256 (332)
T PRK06425 184 NVIIGRSLTKILGIPSLRI-GYIATDDYNMKISRKITE----PWS--VCDPAIDFIRSIDLDYVAKHSLDIMENERSYLI 256 (332)
T ss_pred CEEEEeecHHhcCCchhhh-eeeecCHHHHHHHHHcCC----CCc--cCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999 999999999988876433 111 12222212111 1122 3344566788899999
Q ss_pred HHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccccccccccc
Q 013079 318 RRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGS 397 (450)
Q Consensus 318 ~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~ 397 (450)
+.|++++..+..|. .|+++++.+++ ...|.+.|... | +.+..|+...
T Consensus 257 ~~L~~~g~~~~~~~-------------------~g~f~~~~~~~---~~~~~~~l~~~---g-i~v~~~~~f~------- 303 (332)
T PRK06425 257 NNLEAMGFRAAGDP-------------------SANFITFMIPD---AHDFYSYLLKN---G-ILVRLLDDYE------- 303 (332)
T ss_pred HHHHHCCCEECCCC-------------------CceEEEEEcCC---HHHHHHHHHHC---C-eEEEECCCCC-------
Confidence 99998876543232 36689998872 45566666542 3 4544442210
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 398 STSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 398 ~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
+..+++||||+| . .+..+.|.++|++
T Consensus 304 --------------~~~~~~iRis~~-~---~~~~~~l~~al~~ 329 (332)
T PRK06425 304 --------------CLGEQYIRIAIR-R---RSFNIKLVNALRN 329 (332)
T ss_pred --------------CCCCCEEEEEeC-C---HHHHHHHHHHHHH
Confidence 111478999999 3 2334455555554
No 75
>PRK08960 hypothetical protein; Provisional
Probab=99.96 E-value=2.7e-27 Score=238.02 Aligned_cols=280 Identities=19% Similarity=0.190 Sum_probs=197.0
Q ss_pred hHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 100 TVLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 100 ~~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
...++|+.+|++++ .+++++|+| +++|+++++..++.+||+|++++|+|+.+...+. ..|.++.
T Consensus 70 g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G---~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-----~~g~~~~ 141 (387)
T PRK08960 70 GLPALREAIAGFYAQRYGVDVDPERILVTPG---GSGALLLASSLLVDPGKHWLLADPGYPCNRHFLR-----LVEGAAQ 141 (387)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEEccC---cHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-----hcCCeEE
Confidence 45667888888752 467899999 9999999999999999999999999999988775 2455665
Q ss_pred EeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----c
Q 013079 172 FVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----A 236 (450)
Q Consensus 172 ~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~ 236 (450)
.++.+ |++++++++ +++++++++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++. .
T Consensus 142 ~v~~~~~~~~~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~ 220 (387)
T PRK08960 142 LVPVGPDSRYQLTPALVERHW-NADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVL 220 (387)
T ss_pred EEecCcccCCCCCHHHHHHHh-CccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChh
Confidence 55432 688999988 778999999999999999987 5577778999999999999996554321 1
Q ss_pred CC-CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-C-CcHHHHHHHHHHHH
Q 013079 237 RL-GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-I-PHLGLRMKEHCHRA 313 (450)
Q Consensus 237 ~~-g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~-~~l~~~~~~~~~~~ 313 (450)
.. ...++++|+||.+|++|+|+ ||+++++++++.+....... ....+.+.+.++..++.. . .++....+.+.+++
T Consensus 221 ~~~~~vi~~~S~SK~~g~~GlRi-G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~ 298 (387)
T PRK08960 221 EVDDDAFVLNSFSKYFGMTGWRL-GWLVAPPAAVPELEKLAQNL-YISASTPAQHAALACFEPETLAILEARRAEFARRR 298 (387)
T ss_pred hccCCEEEEeecccccCCcccEE-EEEEcCHHHHHHHHHHHhhh-ccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Confidence 12 35689999999999999998 99999999998887665421 122344455544444432 1 34555556678889
Q ss_pred HHHHHHHHhCCCee-eCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhcccccccccccccccccc
Q 013079 314 LIFARRMKKLGLKV-LYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGFMAVSLGYYETL 391 (450)
Q Consensus 314 ~~l~~~L~~~~~~v-~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~ 391 (450)
+.+.+.|++++..+ ..|. .|.++|++++. ......|...+.. +.| +.+..|+.+..
T Consensus 299 ~~l~~~L~~~~~~~~~~p~-------------------g~~f~~~~~~~~~~~~~~~~~~ll~--~~g-i~v~pg~~f~~ 356 (387)
T PRK08960 299 DFLLPALRELGFGIAVEPQ-------------------GAFYLYADISAFGGDAFAFCRHFLE--TEH-VAFTPGLDFGR 356 (387)
T ss_pred HHHHHHHHhcCCcCCcCCC-------------------eeEEEEEeccccCCCHHHHHHHHHH--hCC-EEEcCchHhCC
Confidence 99999998876533 2232 46688988863 1224566655421 123 45555533210
Q ss_pred ccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 392 MSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
+..+++||||++ . +.+.+.+.
T Consensus 357 --------------------~~~~~~iRi~~~-~-~~~~l~~a 377 (387)
T PRK08960 357 --------------------HQAGQHVRFAYT-Q-SLPRLQEA 377 (387)
T ss_pred --------------------CCCCCeEEEEec-C-CHHHHHHH
Confidence 012468999999 6 33433333
No 76
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=2e-27 Score=238.75 Aligned_cols=283 Identities=18% Similarity=0.190 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHh----CC----C-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 101 VLNLSRQMAALE----GT----E-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 101 ~~~l~~~iA~l~----g~----~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
..++|+.+|+++ |. + .+++|+| +++++..++..++++||+|++++|+|+.+...+. ..|.++.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G---~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-----~~G~~v~ 140 (383)
T TIGR03540 69 MLAYRQAVADWYKRRFGVELDPETEVLSLIG---SKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTL-----FAGGEPY 140 (383)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCeEEECCC---cHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHH-----hcCCEEE
Confidence 355667776654 32 3 4788999 9999999999999999999999999999887764 3677777
Q ss_pred EeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------
Q 013079 172 FVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ 235 (450)
Q Consensus 172 ~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------ 235 (450)
.++.+ |++++++++ .+++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++.
T Consensus 141 ~v~~~~~~g~~~d~~~l~~~~-~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~ 219 (383)
T TIGR03540 141 EMPLKEENGFLPDFDAIPEDI-AKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSF 219 (383)
T ss_pred EEecCcccCCccCHHHHHhhc-cccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCc
Confidence 76642 678898888 778999999999999999987 6899999999999999999995543211
Q ss_pred cC----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-CCcHHHHHHHHH
Q 013079 236 AR----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHC 310 (450)
Q Consensus 236 ~~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~ 310 (450)
.. ...++++.|+||.+|.+|+|+ ||+++++++++.+....... ....+.+.+.++..++.. .+++.+..+.+.
T Consensus 220 ~~~~~~~~~~i~~~SfSK~~g~~GlRi-G~~i~~~~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 297 (383)
T TIGR03540 220 LEVDGAKDVGIEFHSLSKTYNMTGWRI-GMAVGNADLIAGLGKVKTNV-DSGVFQAIQYAAIAALNGPQDVVKEIRKIYQ 297 (383)
T ss_pred ccCCCcccCEEEEEecccccCCcccee-eEEeCCHHHHHHHHHHHHhc-ccCCChHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 11 135688999999999999999 99999999998887665411 112222344444444433 244555566678
Q ss_pred HHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccc
Q 013079 311 HRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYET 390 (450)
Q Consensus 311 ~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s 390 (450)
++++.+.+.|++++..+..|. .|.++|+.+++......|.+.+.. +.| +.+..|+.+.
T Consensus 298 ~~~~~~~~~L~~~~~~~~~~~-------------------~~~~~~~~l~~~~~~~~~~~~ll~--~~g-i~v~~g~~f~ 355 (383)
T TIGR03540 298 RRRDLLLEALKKIGIDVEKPK-------------------ATFYVWVPVPEGYTSAEFAARLLE--ETG-VVVTPGVGFG 355 (383)
T ss_pred HHHHHHHHHHHhCCCEecCCC-------------------cceEEEEECCCCCCHHHHHHHHHH--HCC-EEEecchhhC
Confidence 889999999998876554332 355789998743235567766532 122 4555443320
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 391 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
. ...++||||+| .. . +.|.++++.+.
T Consensus 356 ~---------------------~~~~~~Ris~~-~~-~----~~l~~~l~~l~ 381 (383)
T TIGR03540 356 E---------------------YGEGYIRISLT-VP-D----ERLEEAVARIK 381 (383)
T ss_pred c---------------------cCCCeEEEEec-CC-H----HHHHHHHHHHh
Confidence 0 01478999999 64 2 35666666554
No 77
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=1.3e-27 Score=240.44 Aligned_cols=285 Identities=15% Similarity=0.145 Sum_probs=202.0
Q ss_pred hhHHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 99 PTVLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 99 ~~~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
+...+||+++|+++ | .+ ++++|+| +++++..++..++++||+|++++|+|+.+...+. ..|.+
T Consensus 70 ~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G---~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-----~~g~~ 141 (389)
T PRK08068 70 RGYPFLKEAAADFYKREYGVTLDPETEVAILFG---GKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVA-----LARAQ 141 (389)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC---cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----hcCCE
Confidence 34567888888875 3 24 5889999 9999999999999999999999999999887765 36777
Q ss_pred EEEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccCH---HHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013079 170 TTFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVANI---PELSRLAHDKGVTVVVDNTFSPLVLSP---- 235 (450)
Q Consensus 170 v~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l---~~I~~la~~~gi~livD~~~~~~~~~~---- 235 (450)
+..++.+ |++++++++ .+++++|++++||||||.+.+. ++|+++|+++++++|+|++|..+.++.
T Consensus 142 ~~~i~~~~~~~~~~d~~~l~~~~-~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~ 220 (389)
T PRK08068 142 FETMPLIAENNFLPDYTKIPEEV-AEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPV 220 (389)
T ss_pred EEEeecccccCCCCCHHHHHHhc-cccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCc
Confidence 7777653 678888888 6789999999999999999875 688889999999999999995543321
Q ss_pred --cC----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccC-CCchHHHHHHHHc-cCCcHHHHHH
Q 013079 236 --AR----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLG-PTMNPKVAFELSE-RIPHLGLRMK 307 (450)
Q Consensus 236 --~~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g-~~~~~~~a~~~~~-~~~~l~~~~~ 307 (450)
.. .+..+++.|+||.+|.+|+|+ ||+++++++++.+....... ..+ ..+.+.++...+. ..+++....+
T Consensus 221 s~~~~~~~~~~~i~~~S~SK~~g~~GlRi-G~~~~~~~l~~~l~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 297 (389)
T PRK08068 221 SFLQTPGAKDVGIELYTLSKTFNMAGWRV-AFAVGNESVIEAINLLQDHL--FVSLFGAIQDAAIEALLSDQSCVAELVA 297 (389)
T ss_pred ChhhCCCccCCEEEEecchhccCCcccee-EeEecCHHHHHHHHHHHhhc--cCCCChHHHHHHHHHHhCcHHHHHHHHH
Confidence 11 135689999999999999999 99999999999887765521 112 1223344333332 2344555666
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccc
Q 013079 308 EHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGY 387 (450)
Q Consensus 308 ~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~ 387 (450)
++.++++.+.+.|+++++.+..|. .|.++|+.+++......|.+.+... .| +.+..|.
T Consensus 298 ~~~~~r~~~~~~L~~~g~~~~~~~-------------------g~~~~~v~~~~~~~~~~~~~~l~~~--~g-i~v~pg~ 355 (389)
T PRK08068 298 RYESRRNAFISACREIGWEVDAPK-------------------GSFFAWMPVPKGYTSEQFADLLLEK--AH-VAVAPGN 355 (389)
T ss_pred HHHHHHHHHHHHHHHCCCcccCCC-------------------eeEEEEEECCCCCCHHHHHHHHHHh--CC-EEEecch
Confidence 788889999999988875543222 3456799987432355676666531 22 4554442
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 388 YETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 388 ~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
... ...+++||||++ ..+ +.|.++++++.+
T Consensus 356 ~f~---------------------~~~~~~iRi~~~-~~~-----~~l~~al~~l~~ 385 (389)
T PRK08068 356 GFG---------------------EHGEGYVRVGLL-TDE-----ERLREAVERIGK 385 (389)
T ss_pred HhC---------------------ccCCCeEEEEEc-CCH-----HHHHHHHHHHHH
Confidence 210 011478999999 632 355566665544
No 78
>PRK07682 hypothetical protein; Validated
Probab=99.96 E-value=1.5e-27 Score=239.16 Aligned_cols=272 Identities=19% Similarity=0.232 Sum_probs=195.6
Q ss_pred hhHHHHHHHHHHHhC--------CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 99 PTVLNLSRQMAALEG--------TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g--------~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
+....+|+.+|++++ .+ ++++|+| +++|+.+++..++++||+|++++|+|+.+...+. ..|.+
T Consensus 57 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G---~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-----~~g~~ 128 (378)
T PRK07682 57 AGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVG---ASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVT-----LAGGV 128 (378)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCC---hHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHH-----HcCCE
Confidence 445667777777763 23 6899999 9999999999999999999999999998877765 24556
Q ss_pred EEEeCC-------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013079 170 TTFVDI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---- 235 (450)
Q Consensus 170 v~~v~~-------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---- 235 (450)
+..++. .|++++++++ .+++++|++++||||||.+.+ +++|+++|+++++++|+|++|..+.++.
T Consensus 129 ~~~~~~~~~~~~~~d~~~l~~~~-~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 207 (378)
T PRK07682 129 PVPVATTLENEFKVQPAQIEAAI-TAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTS 207 (378)
T ss_pred EEEeecCCccCCCCCHHHHHhhc-CcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCC
Confidence 555543 2789999988 778999999999999999975 8899999999999999999996554321
Q ss_pred -cC----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-CCcHHHHHHHH
Q 013079 236 -AR----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEH 309 (450)
Q Consensus 236 -~~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~ 309 (450)
.. ...++++.|+||.++.+|+|+ ||+++++++++.+..... ......+.+.+.++..++.. ..++....+.+
T Consensus 208 ~~~~~~~~~~~i~~~S~SK~~~~~GlR~-G~~~~~~~~i~~l~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~ 285 (378)
T PRK07682 208 FASIKGMRERTILISGFSKGFAMTGWRL-GFIAAPVYFSEAMLKIHQ-YSMMCAPTMAQFAALEALRAGNDDVIRMRDSY 285 (378)
T ss_pred hhhcccccCCEEEEecCcccccChhhhh-hhhhcCHHHHHHHHHHHH-hhccCCCHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 11 146799999999999999999 999999999998876554 11123344455555444443 23455556667
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhccccccccccccccc
Q 013079 310 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYY 388 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~ 388 (450)
+++++.+.+.|++++..+..|. .|.++|+.++ .......|.+.+.. ..| +.+..|..
T Consensus 286 ~~~~~~~~~~L~~~~~~~~~p~-------------------g~~~~~~~~~~~~~~~~~~~~~ll~--~~g-v~v~pg~~ 343 (378)
T PRK07682 286 RKRRNFFVTSFNEIGLTCHVPG-------------------GAFYAFPSISSTGLSSEEFAEQLLL--EEK-VAVVPGSV 343 (378)
T ss_pred HHHHHHHHHHHHHCCCccCCCC-------------------eeEEEEEeccCCCCCHHHHHHHHHH--hCC-EEEcCchh
Confidence 8999999999998866543332 3457777774 11124566666532 123 45555533
Q ss_pred cccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC
Q 013079 389 ETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL 425 (450)
Q Consensus 389 ~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~ 425 (450)
+. .-.+++||||++ .
T Consensus 344 f~---------------------~~~~~~iRis~~-~ 358 (378)
T PRK07682 344 FG---------------------ESGEGFIRCSYA-T 358 (378)
T ss_pred hC---------------------cCCCCeEEEEeC-C
Confidence 20 001478999999 6
No 79
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=1.1e-27 Score=240.75 Aligned_cols=286 Identities=17% Similarity=0.163 Sum_probs=201.5
Q ss_pred hhHHHHHHHHHHHhCC----C-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 99 PTVLNLSRQMAALEGT----E-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~----~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
+.++.+.+.+.++++. + .+++|+| +++|+.+++.+++.+||+|+++.|.|.++...++ ..|.++..+
T Consensus 71 ~lr~~~a~~l~~~~~~~~~~~~~i~~t~G---~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~-----~~g~~~~~~ 142 (386)
T PRK09082 71 ALREAIAAKTARLYGRQYDADSEITVTAG---ATEALFAAILALVRPGDEVIVFDPSYDSYAPAIE-----LAGGRAVRV 142 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCC---HHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHH-----HcCCEEEEE
Confidence 3456666666666664 2 5899999 9999999999999999999999999999887775 257777777
Q ss_pred CCC------CHHHHHHhhhcCCceEEEEecCCCCcccc---cCHHHHHHHHHhcCCEEEEeCCCCCCCCC------ccC-
Q 013079 174 DIS------DHEMVNSAIVQGRTKVLYFESISNPTLAV---ANIPELSRLAHDKGVTVVVDNTFSPLVLS------PAR- 237 (450)
Q Consensus 174 ~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v---~~l~~I~~la~~~gi~livD~~~~~~~~~------~~~- 237 (450)
+.+ |++++++++ ++++++|++++|+||||.+ .++++|.++|+++|+++|+|++|..+.++ ...
T Consensus 143 ~~~~~~~~~d~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~ 221 (386)
T PRK09082 143 ALQPPDFRVDWQRFAAAI-SPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRH 221 (386)
T ss_pred ecCcccccCCHHHHHHhc-CccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhC
Confidence 653 788999988 7789999999999999988 46889999999999999999998554332 111
Q ss_pred ---CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHc-cCCcHHHHHHHHHHHH
Q 013079 238 ---LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE-RIPHLGLRMKEHCHRA 313 (450)
Q Consensus 238 ---~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-~~~~l~~~~~~~~~~~ 313 (450)
.+..++++|+||.+|.+|+|+ ||+++++++++.+...... .....+.+.+.++...+. ..+++.+..+.+++++
T Consensus 222 ~~~~~~~i~~~S~SK~~~~~G~Ri-G~iv~~~~l~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 299 (386)
T PRK09082 222 PELRERAFVVSSFGKTYHVTGWKV-GYCVAPAALSAEFRKVHQY-NTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKR 299 (386)
T ss_pred cCccCcEEEEeechhhccchhhhh-hhhhCCHHHHHHHHHHHhh-hcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 146799999999999999999 9999999999888776541 113344445554444443 3334444555678889
Q ss_pred HHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHh-hccccccccccccccccc
Q 013079 314 LIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYL-QNYAQFGFMAVSLGYYET 390 (450)
Q Consensus 314 ~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~~~l-~~~~~~g~i~vs~G~~~s 390 (450)
+.+.+.|++.+..+..| ..|.++|+.++. ......|...| .. .| +.+..|+...
T Consensus 300 ~~~~~~L~~~~~~~~~~-------------------~g~~~~~~~~~~~~~~~~~~~~~~l~~~---~~-v~v~pg~~f~ 356 (386)
T PRK09082 300 DRFRAALANSRFKLLPC-------------------EGTYFQLVDYSAISDLDDVEFCQWLTRE---HG-VAAIPLSVFY 356 (386)
T ss_pred HHHHHHHHhCCCcccCC-------------------CeeEEEEEeccccCCCCHHHHHHHHHHh---CC-EEEeCcHHhC
Confidence 99999998866554322 245678888862 11245566654 32 23 4555443210
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 391 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
. .+...+.+|||++ . + ++ .+.+++++++
T Consensus 357 ~-------------------~~~~~~~~Ri~~~-~-~-~~---~l~~~~~rl~ 384 (386)
T PRK09082 357 A-------------------DPFPHRLVRLCFA-K-Q-EE---TLDAAAERLC 384 (386)
T ss_pred C-------------------CCCCCCEEEEEec-C-C-HH---HHHHHHHHHh
Confidence 0 0112578999999 6 3 22 4444444443
No 80
>PLN02187 rooty/superroot1
Probab=99.96 E-value=2.8e-27 Score=242.10 Aligned_cols=217 Identities=16% Similarity=0.165 Sum_probs=163.1
Q ss_pred hhHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 99 PTVLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
.....+|+.||++++ .+++++|+| +++|+.+++.+++++||+|++++|+|+.+...+. ..|.++
T Consensus 108 ~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G---~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~-----~~g~~~ 179 (462)
T PLN02187 108 AGILPARRAVADYMNRDLPHKLTPEDIFLTAG---CNQGIEIVFESLARPNANILLPRPGFPHYDARAA-----YSGLEV 179 (462)
T ss_pred CChHHHHHHHHHHHHHhcCCCCCcccEEEeCC---HHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHH-----HcCCEE
Confidence 346678888888763 467899999 9999999999999999999999999999876664 257777
Q ss_pred EEeCC---C----CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----
Q 013079 171 TFVDI---S----DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP----- 235 (450)
Q Consensus 171 ~~v~~---~----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~----- 235 (450)
..++. + |++++++++ ++++++|++++||||||.+.+ +++|+++|+++|+++|+||+|..+.+..
T Consensus 180 ~~~~l~~~~~~~~d~~~l~~~~-~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s 258 (462)
T PLN02187 180 RKFDLLPEKEWEIDLEGIEAIA-DENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVS 258 (462)
T ss_pred EEEeCccccCCccCHHHHHHhc-CCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcee
Confidence 77654 1 789999988 788999999999999999976 7889999999999999999996654321
Q ss_pred -cCC---CCeEEEeCCCCccccCccceEEEEEcC-H-HH---HHHHHHHhhhhhhccC-CCchHHHHHHHHcc--CCcHH
Q 013079 236 -ARL---GADVVVHSISKFISGGADIIAGAVCGP-A-NL---VNSMMDLHQGALMLLG-PTMNPKVAFELSER--IPHLG 303 (450)
Q Consensus 236 -~~~---g~di~~~S~sK~~g~~g~~igG~l~~~-~-~~---~~~l~~~~~~~~~~~g-~~~~~~~a~~~~~~--~~~l~ 303 (450)
..+ ...++++|+||.|+.+|+|+ ||++++ + .+ ++.+...+.......+ +.+.+.++..++.. .+++.
T Consensus 259 ~~~~~~~~~vi~l~SfSK~f~~pGlRi-G~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~ 337 (462)
T PLN02187 259 MGKFASIVPVLTLAGISKGWVVPGWKI-GWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFA 337 (462)
T ss_pred HHHhccCCcEEEEecchhhcCCcccee-EEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHH
Confidence 111 24689999999999999999 999873 3 22 3455444432211112 34445555444432 23455
Q ss_pred HHHHHHHHHHHHHHHHHHhCCC
Q 013079 304 LRMKEHCHRALIFARRMKKLGL 325 (450)
Q Consensus 304 ~~~~~~~~~~~~l~~~L~~~~~ 325 (450)
...+.+.++++.+.+.|++++.
T Consensus 338 ~~~~~l~~~r~~l~~~L~~~~~ 359 (462)
T PLN02187 338 KKNKILKHNVDLVCDRLKDIPC 359 (462)
T ss_pred HHHHHHHHHHHHHHHHHhhCCC
Confidence 6666788899999999988754
No 81
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=1.7e-27 Score=239.65 Aligned_cols=242 Identities=13% Similarity=0.138 Sum_probs=176.8
Q ss_pred hHHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 100 TVLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 100 ~~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
...+||+.||+++ | .+ .+++|+| +++++.+++..++.+||+|++++|+|+.+...+. ..|.++
T Consensus 69 G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G---s~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~ 140 (388)
T PRK07366 69 GTLDFREAAAQWYEQRFGLAVDPETEVLPLIG---SQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVY-----LAGGQI 140 (388)
T ss_pred CCHHHHHHHHHHHHHhhCCcCCCcCeEEECCC---cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----hcCCEE
Confidence 3456777777765 3 34 5889999 9999999999999999999999999999987775 367777
Q ss_pred EEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----
Q 013079 171 TFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP----- 235 (450)
Q Consensus 171 ~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~----- 235 (450)
..++.+ |++++++.+ .+++++|++++||||||.+.+ +++|+++|+++|+++|+||+|..+.++.
T Consensus 141 ~~v~~~~~~~~~~d~~~l~~~~-~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~ 219 (388)
T PRK07366 141 YPMPLRAENDFLPVFADIPTEV-LAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPP 219 (388)
T ss_pred EEEECCCccCCCCCHHHHHHhh-cccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCC
Confidence 777653 567787777 668999999999999999976 5678889999999999999996654321
Q ss_pred --cCC----CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCC-CchHHHHHHHHc-cCCcHHHHHH
Q 013079 236 --ARL----GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGP-TMNPKVAFELSE-RIPHLGLRMK 307 (450)
Q Consensus 236 --~~~----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~-~~~~~~a~~~~~-~~~~l~~~~~ 307 (450)
..+ ...++++|+||.+|.+|+|+ ||+++++++++.+....... ..+. ...+..+...+. ..+++....+
T Consensus 220 ~~~~~~~~~~~vi~~~SfSK~~g~~GlRi-G~~v~~~~li~~l~~~~~~~--~~~~~~~~~~~a~~~l~~~~~~l~~~~~ 296 (388)
T PRK07366 220 SILQADPEKSVSIEFFTLSKSYNMGGFRI-GFAIGNAQLIQALRQVKAVV--DFNQYRGILNGAIAALTGPQATVQQTVQ 296 (388)
T ss_pred ChhhCCCCcccEEEEeecccccCCcchhh-eehcCCHHHHHHHHHHHhhc--ccCCCHHHHHHHHHHHhCcHHHHHHHHH
Confidence 111 24588999999999999999 99999999999887765521 1122 111223323322 2234555666
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHh
Q 013079 308 EHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYL 372 (450)
Q Consensus 308 ~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~~~~~l 372 (450)
.+.++++.+.+.|++++..+..|. .|.++|+.++.. ....+|.+.+
T Consensus 297 ~~~~~r~~l~~~L~~~~~~~~~p~-------------------~g~f~~~~~~~~~~~~~~~~~~~l 344 (388)
T PRK07366 297 IFRQRRDAFINALHQIGWPVPLPE-------------------ATMYVWAKLPEPWQGNSVEFCTQL 344 (388)
T ss_pred HHHHHHHHHHHHHHHCCCcccCCC-------------------eeEEEEEECCcccCCCHHHHHHHH
Confidence 778889999999988765433332 577899998742 1134565554
No 82
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=3.2e-27 Score=231.94 Aligned_cols=288 Identities=18% Similarity=0.212 Sum_probs=218.2
Q ss_pred ccCCCChhHHHHHHHHHHHhC-C--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 93 YSRHFNPTVLNLSRQMAALEG-T--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 93 y~r~~~~~~~~l~~~iA~l~g-~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
+.||.++...++++.+|++++ . +.+++++| ++|.+..+++.++.+||.|+++.|+|..+...++ ..|.+
T Consensus 51 ~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnG---sde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~-----~~g~~ 122 (356)
T COG0079 51 LNRYPDPDYRELRAALAEYYGVVDPENVLVGNG---SDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQ-----LAGAE 122 (356)
T ss_pred hccCCCCcHHHHHHHHHHHhCCCCcceEEEcCC---hHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHH-----hcCCe
Confidence 557778889999999999999 4 46788999 9999999999999999999999999999988775 47888
Q ss_pred EEEeCC----CCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc--CCEEEEeCCCCCCCC-Ccc----CC
Q 013079 170 TTFVDI----SDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSPLVL-SPA----RL 238 (450)
Q Consensus 170 v~~v~~----~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~~~~-~~~----~~ 238 (450)
+..++. .|++.+.+++ ++++++|++++||||||...+.++|.+++... +.++|+||+|.+|.- +.. ..
T Consensus 123 ~~~v~~~~~~~d~~~~~~~~-~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~ 201 (356)
T COG0079 123 VVKVPLKEFRLDLDAILAAI-RDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYP 201 (356)
T ss_pred EEEecccccccCHHHHHHhh-hcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCC
Confidence 888876 4788999888 66899999999999999999888887777753 889999999965543 111 23
Q ss_pred CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHH
Q 013079 239 GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFAR 318 (450)
Q Consensus 239 g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~ 318 (450)
+..+++.|+||+||.+|.|+ ||+++++++++.+...+.. +.-+.+...++..++...+++....++....++++.+
T Consensus 202 ~nlivlRTfSKa~gLAGlRl-Gy~ia~~~~i~~l~~vr~p---~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~ 277 (356)
T COG0079 202 PNLIVLRTFSKAFGLAGLRV-GYAIANPELIAALNKVRPP---FNVSSPALAAAIAALRDADYLEESVERIREERERLYA 277 (356)
T ss_pred CCEEEEEecHHhhhcchhce-eeccCCHHHHHHHHHhcCC---CCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 45799999999999999999 9999999999999988762 2234445555555555556677778888999999999
Q ss_pred HHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccc
Q 013079 319 RMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSS 398 (450)
Q Consensus 319 ~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~ 398 (450)
.|+.++..-.+|. .++++.+.++..+ +..+.+.|... | +.+... .
T Consensus 278 ~l~~~~~~~v~pS-------------------~aNFvlv~~~~~~-~~~l~~~L~~~---g-iivR~~-----------~ 322 (356)
T COG0079 278 ALKALGLFGVFPS-------------------QANFVLVRVPDAE-AAALAEALLKK---G-ILVRDC-----------S 322 (356)
T ss_pred HHHhCCCCeecCC-------------------CCcEEEEECCCcc-HHHHHHHHHHC---C-EEEEeC-----------C
Confidence 9999874323454 3568999988633 45666776542 2 222111 0
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 399 TSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 399 ~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
. .+..++++|||+| . .++- +.|.++|.++.
T Consensus 323 ~-----------~~~~~~~lRitvg-t--~een-~~ll~AL~~~~ 352 (356)
T COG0079 323 S-----------VGLLPGYLRITVG-T--PEEN-DRLLAALREVL 352 (356)
T ss_pred C-----------CCCCCCeEEEEeC-C--HHHH-HHHHHHHHHHH
Confidence 0 1233679999999 3 2332 56666665543
No 83
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=8.7e-28 Score=239.27 Aligned_cols=279 Identities=20% Similarity=0.197 Sum_probs=203.7
Q ss_pred CChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 97 FNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
......++++.+|++++. +++++|+| +++++..++.+++++||+|++++|+|+.+...+. ..|.++..++
T Consensus 62 p~~g~~~lr~~ia~~~~~~~~~i~~t~G---~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~-----~~g~~~~~~~ 133 (359)
T PRK03158 62 PDGYAPELRTKVAKHLGVDEEQLLFGAG---LDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAI-----IEGAEVREVP 133 (359)
T ss_pred CCCcHHHHHHHHHHHhCCCHHHEEECCC---HHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHH-----HcCCeEEEEe
Confidence 334577899999999985 46899999 9999999999999999999999999999877664 2577777776
Q ss_pred CC----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc---c------CCC
Q 013079 175 IS----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP---A------RLG 239 (450)
Q Consensus 175 ~~----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~---~------~~g 239 (450)
.+ |++++++++ ++++++|++++||||||.+.+.++|.++++. +|+++|+||+|..+.+.. . ..+
T Consensus 134 ~~~~~~d~~~l~~~~-~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 212 (359)
T PRK03158 134 LKDGGHDLEAMLKAI-DEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYE 212 (359)
T ss_pred cCCCCcCHHHHHHhc-CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcC
Confidence 53 789998888 7889999999999999999999999998876 599999999995543211 1 125
Q ss_pred CeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH
Q 013079 240 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARR 319 (450)
Q Consensus 240 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~ 319 (450)
.++++.|+||.+|++|+|+ ||+++++++++.+...+.. ...+.+.+.++..++...+++....+.+.++++.+.+.
T Consensus 213 ~vi~~~S~SK~~g~~GlRi-G~~v~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 288 (359)
T PRK03158 213 NLIVLRTFSKAYGLAALRV-GYGIASEELIEKLNIARPP---FNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAF 288 (359)
T ss_pred CEEEEEechHhhcCcchhh-ehhcCCHHHHHHHHHhcCC---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999 9999999999888766541 23344555555555543334444445567778888888
Q ss_pred HHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccccccccccccc
Q 013079 320 MKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSST 399 (450)
Q Consensus 320 L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~ 399 (450)
|++++..+ .|. .|.++++.++. ....+.+.|... | +.+..|+..
T Consensus 289 l~~~~~~~-~~~-------------------~g~~i~~~~~~--~~~~~~~~l~~~---g-v~v~~g~~f---------- 332 (359)
T PRK03158 289 CKEYGLFY-YPS-------------------QTNFIFVDTGR--DANELFEALLKK---G-YIVRSGAAL---------- 332 (359)
T ss_pred HHHCCCee-CCC-------------------cCcEEEEECCC--CHHHHHHHHHHC---C-eEEeeCCCC----------
Confidence 88876544 232 35688888752 234566666532 3 555555321
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 400 SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 400 ~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
+. +++||||++ . .+..+.+.++|++
T Consensus 333 ------------~~-~~~iRi~~~-~---~~~~~~l~~al~~ 357 (359)
T PRK03158 333 ------------GF-PTGVRITIG-L---KEQNDKIIELLKE 357 (359)
T ss_pred ------------CC-CCeEEEecC-C---HHHHHHHHHHHHH
Confidence 11 478999999 3 3334444444443
No 84
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.96 E-value=1.2e-27 Score=241.54 Aligned_cols=331 Identities=14% Similarity=0.136 Sum_probs=222.9
Q ss_pred cCccccCC-HHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHh---c
Q 013079 65 SATFTVME-PETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQL---C 138 (450)
Q Consensus 65 att~~~~~-~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l---~ 138 (450)
+++++.+. .+++.+.+.....++.+.|.++....+..+++++.+++++|++ .+++++| +++++++++.++ +
T Consensus 25 ~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~---~t~~l~~~~~~~~~~~ 101 (397)
T TIGR01976 25 AGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGAN---ATSLTFLLSRAISRRW 101 (397)
T ss_pred ccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCC---HHHHHHHHHHHHHhcC
Confidence 33333333 4777777765555555555544444466899999999999974 4899999 999998877665 5
Q ss_pred cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHH
Q 013079 139 SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELS 212 (450)
Q Consensus 139 ~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~ 212 (450)
++||+|++++++|.+....+...... .|.++.+++.+ |++++++++ +++|++|++++|+||||.+.|+++|.
T Consensus 102 ~~gd~vl~~~~~~~s~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~~i-~~~~~lv~i~~~~n~tG~~~~~~~i~ 179 (397)
T TIGR01976 102 GPGDEVIVTRLDHEANISPWLQAAER-AGAKVKWARVDEATGELHPDDLASLL-SPRTRLVAVTAASNTLGSIVDLAAIT 179 (397)
T ss_pred CCCCEEEEcCCchHhHHHHHHHHHHh-cCCEEEEEeccccCCCcCHHHHHHhc-CCCceEEEEeCCCCCCCccCCHHHHH
Confidence 78999999999998876655333333 68888887653 689999999 78899999999999999999999999
Q ss_pred HHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhh------hhccC
Q 013079 213 RLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA------LMLLG 284 (450)
Q Consensus 213 ~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~------~~~~g 284 (450)
++|+++|+++++|+++ +....+..+.++|+++.|+||++|+ ++ |+++.++++++.+......+ .....
T Consensus 180 ~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~---~~-G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 255 (397)
T TIGR01976 180 ELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGP---HM-GILWGRPELLMNLPPYKLTFSYDTGPERFEL 255 (397)
T ss_pred HHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCC---ce-EEEEEcHHHHhhCCCccccCccCCCcchhcC
Confidence 9999999999999998 3333455556899999999999974 35 99988888877664322111 00111
Q ss_pred CCchHH------HHHHHHccCC-------------cHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHH
Q 013079 285 PTMNPK------VAFELSERIP-------------HLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSM 344 (450)
Q Consensus 285 ~~~~~~------~a~~~~~~~~-------------~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~ 344 (450)
++++.. .+...+.... .+....++..++++++.+.|++++ .++..+.-. .
T Consensus 256 gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~---~------- 325 (397)
T TIGR01976 256 GTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARL---A------- 325 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCc---c-------
Confidence 222211 1111111111 022223344667788888888776 466544200 0
Q ss_pred hccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCC--CCeEEEEe
Q 013079 345 ANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGIS--AGLVRMSV 422 (450)
Q Consensus 345 ~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~--~~~iRiS~ 422 (450)
..++++.|.+++.. ...+.+.|... | |.++.|+.|.. ......+++ .+.||||+
T Consensus 326 -----~~~~~~~~~~~~~~-~~~l~~~L~~~---g-I~v~~~~~~~~--------------~~~~~~~~~~~~~~iRis~ 381 (397)
T TIGR01976 326 -----ARVPTVSFTVHGLP-PQRVVRRLADQ---G-IDAWAGHFYAV--------------RLLRRLGLNDEGGVVRVGL 381 (397)
T ss_pred -----CCCceEEEEeCCcC-HHHHHHHHHHC---C-eEEEeCccchH--------------HHHHHhCCCCCCCeEEEEe
Confidence 13568888887532 45677777653 3 66776655431 111223443 46899999
Q ss_pred CCCCCHHHHHHHHHHHH
Q 013079 423 GYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 423 g~~~~~~~~i~~l~~al 439 (450)
+ ..+++++++.|.++|
T Consensus 382 ~-~~~t~~di~~l~~~l 397 (397)
T TIGR01976 382 A-HYNTAEEVDRLLEAL 397 (397)
T ss_pred e-ccCCHHHHHHHHHhC
Confidence 9 888888899887764
No 85
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=1e-27 Score=238.78 Aligned_cols=276 Identities=14% Similarity=0.154 Sum_probs=199.0
Q ss_pred CChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 97 FNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
......++++.||++++. +++++|+| +++++.+++.+++++||+|+++.|+|+.+...+. ..|.++..++
T Consensus 62 p~~g~~~Lr~aia~~~~~~~~~I~vt~G---s~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~-----~~g~~v~~v~ 133 (366)
T PRK01533 62 PDGGATTLRQTIANKLHVKMEQVLCGSG---LDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAI-----IEGCEVKEVA 133 (366)
T ss_pred CCCCHHHHHHHHHHHhCCCcceEEECCC---HHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHH-----HcCCEEEEee
Confidence 344567899999999975 56899999 9999999999999999999999999999988775 3688888877
Q ss_pred CC----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHH---hcCCEEEEeCCCCCCCCC-----cc----CC
Q 013079 175 IS----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAH---DKGVTVVVDNTFSPLVLS-----PA----RL 238 (450)
Q Consensus 175 ~~----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~---~~gi~livD~~~~~~~~~-----~~----~~ 238 (450)
.+ |++++++++ ++++++|++++||||||.+.+.+++.++++ +++ ++|+||+|..+... .. ..
T Consensus 134 ~~~~~~d~~~l~~~~-~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~ 211 (366)
T PRK01533 134 LNNGVYDLDEISSVV-DNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKH 211 (366)
T ss_pred cCCCCcCHHHHHHHh-CcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccC
Confidence 64 799999988 778999999999999999998666655554 444 67889998443221 11 12
Q ss_pred CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHH
Q 013079 239 GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFAR 318 (450)
Q Consensus 239 g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~ 318 (450)
+..+++.|+||.+|++|+|+ ||+++++++++.+...+.. ...+.+.+.++..++...++.....+...++++++.+
T Consensus 212 ~~vi~~~SfSK~~~l~GlRi-G~~i~~~~~~~~l~~~~~~---~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~ 287 (366)
T PRK01533 212 KNILVLRTFSKAYGLASFRV-GYAVGHEELIEKLNVVRLP---FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYES 287 (366)
T ss_pred CCEEEEeCchHHhcChHHHH-hHHhCCHHHHHHHHHhcCC---CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999 9999999999988766531 2334445555555554433444444556777788888
Q ss_pred HHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccc
Q 013079 319 RMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSS 398 (450)
Q Consensus 319 ~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~ 398 (450)
.|+.+++.+..| .|+++++.+++ ...+.+.|... | +.|..
T Consensus 288 ~l~~~g~~~~~~--------------------~~nf~~~~~~~---~~~~~~~l~~~---G-I~Vr~------------- 327 (366)
T PRK01533 288 FCKENEIPFYQS--------------------QTNFIFLPVEN---GGEIYEACAHA---G-FIIRP------------- 327 (366)
T ss_pred HHHhCCCccCCC--------------------cCcEEEEeCCC---HHHHHHHHHHC---C-cEEcc-------------
Confidence 888776544322 36689998863 34566666642 2 33221
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 399 TSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 399 ~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
. +++||||+|..++.+.+++.|.+.++.
T Consensus 328 --------------~-~~~iRis~~~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 328 --------------F-PNGVRITVGTREQNEGVISVLQQHFEN 355 (366)
T ss_pred --------------C-CCceEEeCCCHHHHHHHHHHHHHHHHh
Confidence 0 257999999335555555555555443
No 86
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=1.2e-26 Score=234.78 Aligned_cols=312 Identities=15% Similarity=0.169 Sum_probs=219.3
Q ss_pred HHHHHhhcCCCCCC--CCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCc
Q 013079 74 ETMRRMFAGELGPD--RDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLY 151 (450)
Q Consensus 74 ~~~~~~~~~~~~n~--~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y 151 (450)
+++.+.++....++ ++.|. .+.+...+|+++||+++|.+.+++|+| |++|+.+++++++.+||+|++..+.|
T Consensus 75 ~a~~~~~~~~~~~~~~s~~~~---~~~~~~~~le~~la~~~g~~~~~~~~s---G~~An~~~l~~l~~~g~~v~~~~~~h 148 (407)
T PRK07179 75 KAQIAALQEEGDSLVMSAVFL---HDDSPKPQFEKKLAAFTGFESCLLCQS---GWAANVGLLQTIADPNTPVYIDFFAH 148 (407)
T ss_pred HHHHHHHHHhCCCCCcccccc---CCchHHHHHHHHHHHHhCCCcEEEECC---HHHHHHHHHHHhCCCCCEEEEECCcC
Confidence 56666665544444 23332 234578899999999999999999999 99999999999999999999999999
Q ss_pred hhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCC-
Q 013079 152 GGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSP- 230 (450)
Q Consensus 152 ~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~- 230 (450)
.+....+. ..|.++..++..|+++|++++.+.++++|++++++||||.++|+++|.++|+++|+++|+|++|+.
T Consensus 149 ~s~~~~~~-----~~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g 223 (407)
T PRK07179 149 MSLWEGVR-----AAGAQAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLG 223 (407)
T ss_pred HHHHHHHH-----HCCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECccccc
Confidence 98876653 257777777777999999999333588999999999999999999999999999999999999832
Q ss_pred -CCCC------ccC--CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHH-H-HHHccC
Q 013079 231 -LVLS------PAR--LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVA-F-ELSERI 299 (450)
Q Consensus 231 -~~~~------~~~--~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a-~-~~~~~~ 299 (450)
+... ... .++|+++.|+||.+|++ + |++++++++++.+....... ...++...+..+ . .++...
T Consensus 224 ~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~---~-G~l~~~~~~~~~~~~~~~~~-~~~~t~~~~~~aa~~aal~~~ 298 (407)
T PRK07179 224 THGPQGAGLVAELGLTSRVHFITASLAKAFAGR---A-GIITCPRELAEYVPFVSYPA-IFSSTLLPHEIAGLEATLEVI 298 (407)
T ss_pred CcCCCCCchHHhcCCCCCCCEEEeechHhhhcc---C-eEEEeCHHHHHHHHHhCcCe-eeCCCCCHHHHHHHHHHHHHH
Confidence 2111 111 14689999999999853 4 99999888877665433211 112222222222 1 222233
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccc
Q 013079 300 PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFG 379 (450)
Q Consensus 300 ~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g 379 (450)
.....+.+++.++++++.+.|++++..+. +.++++++.++.......+.+.|... |
T Consensus 299 ~~~~~~~~~l~~~~~~l~~~L~~~g~~v~---------------------~~~~i~~l~~~~~~~~~~~~~~L~~~---G 354 (407)
T PRK07179 299 ESADDRRARLHANARFLREGLSELGYNIR---------------------SESQIIALETGSERNTEVLRDALEER---N 354 (407)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHcCCCCC---------------------CCCCEEEEEeCCHHHHHHHHHHHHHC---C
Confidence 33445667788899999999988765432 13458888887544456677777642 3
Q ss_pred ccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhcCC
Q 013079 380 FMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDSGV 447 (450)
Q Consensus 380 ~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~~~ 447 (450)
+.++ ....|.. ....+.||||++ ...+++.++.+.++|.++.++.+
T Consensus 355 -I~~~------~~~~p~~--------------~~~~~~lRis~~-~~~t~edi~~~~~~l~~~~~~~~ 400 (407)
T PRK07179 355 -VFGA------VFCAPAT--------------PKNRNLIRLSLN-ADLTASDLDRVLEVCREARDEVD 400 (407)
T ss_pred -ceEe------eecCCCC--------------CCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHhhC
Confidence 2211 1111111 012478999999 88888889999888888766555
No 87
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=5.9e-27 Score=232.49 Aligned_cols=243 Identities=14% Similarity=0.175 Sum_probs=183.0
Q ss_pred CCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 96 HFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
+..+....+|+.+|++++. +++++|+| +++++.+++.+++++||+|+++.|.|..+...+. ..|.++..+
T Consensus 56 y~~~~~~~lr~~ia~~~~~~~~~i~it~G---~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~v 127 (351)
T PRK14807 56 YPDPTAEKLREELARYCSVVPTNIFVGNG---SDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSK-----IAGAVEIPV 127 (351)
T ss_pred CCCccHHHHHHHHHHHhCCCcccEEEecC---HHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHH-----HcCCeEEEe
Confidence 3345568899999999985 56899999 9999999999999999999999999998776654 257777777
Q ss_pred CCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCC-c---c-CCCCeEE
Q 013079 174 DIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLS-P---A-RLGADVV 243 (450)
Q Consensus 174 ~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~-~---~-~~g~di~ 243 (450)
+.+ |++++++++...++++|++++|+||||.+.+.+++.++|++++.++|+|++|..+... . . ..+..++
T Consensus 128 ~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~ 207 (351)
T PRK14807 128 KLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIV 207 (351)
T ss_pred ecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEE
Confidence 653 7899999883348999999999999999999999999999988899999999544311 1 1 2256899
Q ss_pred EeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC
Q 013079 244 VHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL 323 (450)
Q Consensus 244 ~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 323 (450)
++|+||.+|.+|+|+ ||+++++++++.+...... ...+.+.+.++..++.. .++.+..+.+.++++.+.+.|++.
T Consensus 208 ~~S~SK~~~~~GlRi-G~~v~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~r~~l~~~l~~~ 282 (351)
T PRK14807 208 LRTLSKAFGLAGLRV-GYAVANENILKYLNLVKSP---YNINSLSQVIALKVLRT-GVLKERVNYILNERERLIKELSKI 282 (351)
T ss_pred EecchHhcccchhce-eeeecCHHHHHHHHHccCC---CCcCHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999 9999999999888765431 12233444444444432 345556666778888899999775
Q ss_pred C-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 324 G-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 324 ~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
+ ..+ .|. .|+++++.+++. ..+.+.|..
T Consensus 283 ~g~~~-~~~-------------------~~~~~~i~~~~~---~~~~~~l~~ 311 (351)
T PRK14807 283 PGIKV-YPS-------------------KTNFILVKFKDA---DYVYQGLLE 311 (351)
T ss_pred CCcEE-CcC-------------------CccEEEEEcCCH---HHHHHHHHH
Confidence 3 333 232 356888888753 455555553
No 88
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.96 E-value=1.2e-26 Score=233.98 Aligned_cols=316 Identities=13% Similarity=0.152 Sum_probs=219.5
Q ss_pred HHHHHHhhcCC-CCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCc
Q 013079 73 PETMRRMFAGE-LGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLY 151 (450)
Q Consensus 73 ~~~~~~~~~~~-~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y 151 (450)
.+++.+.++.. ++++++.|..|. .+...++|+.||+++|.+.+++++| |++|++.++.+++++||+|++++++|
T Consensus 58 ~~~~~~~~~~~~~~~~~s~~~~G~--~~~~~~le~~ia~~~g~~~~ii~~~---~~~a~~~~~~~l~~~gd~vi~~~~~~ 132 (393)
T TIGR01822 58 IQAAKDALDEHGFGMSSVRFICGT--QDIHKELEAKIAAFLGTEDTILYAS---CFDANGGLFETLLGAEDAIISDALNH 132 (393)
T ss_pred HHHHHHHHHHhCCCCCCcCcccCC--hHHHHHHHHHHHHHhCCCcEEEECc---hHHHHHHHHHHhCCCCCEEEEecccc
Confidence 36666666552 566666666554 6778999999999999999999999 99999999999999999999999999
Q ss_pred hhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhc---C--CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeC
Q 013079 152 GGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ---G--RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDN 226 (450)
Q Consensus 152 ~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~---~--~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~ 226 (450)
+++...+. . .+.....+...|++++++++.+ . ++++|++++++||||.+.|+++|+++|+++|+++|+|+
T Consensus 133 ~s~~~~~~-~----~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De 207 (393)
T TIGR01822 133 ASIIDGVR-L----CKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDE 207 (393)
T ss_pred HHHHHHHH-h----cCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEEC
Confidence 99887763 2 2333333445689999988832 2 78899999999999999999999999999999999999
Q ss_pred CC-CCC-CCC------ccC--CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHH--HHHH
Q 013079 227 TF-SPL-VLS------PAR--LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK--VAFE 294 (450)
Q Consensus 227 ~~-~~~-~~~------~~~--~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~--~a~~ 294 (450)
+| .++ ... ... .++|+++.|+||++++ +++ ||+++++++++.+....... ...++.+... ++..
T Consensus 208 ~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g--~r~-G~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~a~~~ 283 (393)
T TIGR01822 208 CHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGG--ASG-GFTTARKEVVELLRQRSRPY-LFSNSLPPAVVGASIK 283 (393)
T ss_pred CccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhC--CCc-EEEEeCHHHHHHHHHhCccc-eecCCCCHHHHHHHHH
Confidence 98 222 111 111 2579999999999874 455 99999999988876543211 1222222221 1222
Q ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 295 LSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 295 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
++...+......+++.++++++.+.|++.+..+..+ .++++.+.+++......|.+.|..
T Consensus 284 al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--------------------~~~~~~i~~~~~~~~~~l~~~L~~ 343 (393)
T TIGR01822 284 VLEMLEASNELRDRLWANTRYFRERMEAAGFDIKPA--------------------DHPIIPVMLYDAVLAQRFARRLLE 343 (393)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCCCCCC--------------------CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 222223334455677888899999998766543211 234677777654456778877764
Q ss_pred cccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhcCC
Q 013079 375 YAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDSGV 447 (450)
Q Consensus 375 ~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~~~ 447 (450)
. | +.++ |... +.. .-....||||++ ..++++.++.+.++|.++.+..+
T Consensus 344 ~---g-I~v~-~~~~-----~~~--------------~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~~~~ 391 (393)
T TIGR01822 344 E---G-IYVT-GFFY-----PVV--------------PKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGRELG 391 (393)
T ss_pred C---C-eeEe-eeCC-----CCC--------------CCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 2 3 4544 3211 100 001246999999 88888888888888887755443
No 89
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=6.5e-27 Score=235.05 Aligned_cols=257 Identities=17% Similarity=0.205 Sum_probs=194.1
Q ss_pred cccccCccccCCHHHHHHhhcCCCCCCCC-CccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc
Q 013079 61 SIEASATFTVMEPETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS 139 (450)
Q Consensus 61 pi~~att~~~~~~~~~~~~~~~~~~n~~~-~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~ 139 (450)
||.+-........+++.+++. .++||++ .|.+++...+.++++++.+|+++|.+++++|+| +++|+.+++.++++
T Consensus 25 ~~~~~~p~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g---~t~a~~~al~~l~~ 100 (387)
T PRK09331 25 PIQRGGILTPEARKALIEYGD-GYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHG---AREGKFAVMHSLCK 100 (387)
T ss_pred hhhcCCCCCHHHHHHHHHHHh-ccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCC---HHHHHHHHHHHhcC
Confidence 555544444334688888884 5578877 788888888999999999999999999999999 99999999999999
Q ss_pred CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC-------CCHHHHHHhhhc------CCceEEEEecCCCCccccc
Q 013079 140 SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI-------SDHEMVNSAIVQ------GRTKVLYFESISNPTLAVA 206 (450)
Q Consensus 140 ~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~-------~d~~~l~~ai~~------~~t~lv~i~~~~NptG~v~ 206 (450)
+||+|+++.++|.+....+. ..|.++.+++. .|++++++++.+ +++++|++++|+|++|.+.
T Consensus 101 ~gd~Vlv~~~~h~s~~~~~~-----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~ 175 (387)
T PRK09331 101 KGDYVVLDGLAHYTSYVAAE-----RAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA 175 (387)
T ss_pred CCCEEEECCCchHHHHHHHH-----HcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc
Confidence 99999999999998876653 36888888876 279999998832 3789999999999999999
Q ss_pred CHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhh----
Q 013079 207 NIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL---- 280 (450)
Q Consensus 207 ~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~---- 280 (450)
|+++|+++|+++|+++|+|++| +.+.++...+++|+++.|+||++++++ ++ |+++.++++++.+........
T Consensus 176 ~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~-~~-G~l~~~~~~i~~~~~~~~~~~~~~~ 253 (387)
T PRK09331 176 DAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASA-PS-GVLATTEEYADKVFRTSRKFGVKEV 253 (387)
T ss_pred cHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCC-CE-EEEEECHHHHhhcccccCCCcccce
Confidence 9999999999999999999999 334566667789999999999998543 45 899999888877654322110
Q ss_pred hccCCCch--HHHH-HHHHccCCcHHHHHHHHHHHHHHHHHHHHhC-CCeee
Q 013079 281 MLLGPTMN--PKVA-FELSERIPHLGLRMKEHCHRALIFARRMKKL-GLKVL 328 (450)
Q Consensus 281 ~~~g~~~~--~~~a-~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~v~ 328 (450)
...+.+.. +..+ ...+........+.+++.++++++.+.|+++ ++++.
T Consensus 254 ~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~~ 305 (387)
T PRK09331 254 ELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQL 305 (387)
T ss_pred eeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 01222221 1111 1111111122234455677788899999998 56654
No 90
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=6.2e-27 Score=233.30 Aligned_cols=287 Identities=21% Similarity=0.237 Sum_probs=204.0
Q ss_pred ccCCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCC-CEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 93 YSRHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 93 y~r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
..+++.+...+|++.||++++. +++++|+| +++++.+++.+++.+| |.|+++.|.|..+...++ ..|.+
T Consensus 53 ~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G---~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~-----~~g~~ 124 (364)
T PRK04781 53 TRRYPDPQPPGLRSALAALYGCAPEQLLIGRG---SDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCAR-----LQNAP 124 (364)
T ss_pred hccCCCCCHHHHHHHHHHHhCcChHHEEEeCC---HHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHH-----HcCCE
Confidence 3455556678999999999986 45899999 9999999999998888 799999999987776554 25777
Q ss_pred EEEeCCC--------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc----
Q 013079 170 TTFVDIS--------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP---- 235 (450)
Q Consensus 170 v~~v~~~--------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~---- 235 (450)
+..++.+ |++++.+++..+++++|++++||||||.+.+.+++.++++. +++++|+||+|..+...+
T Consensus 125 ~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~ 204 (364)
T PRK04781 125 LVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVG 204 (364)
T ss_pred EEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHH
Confidence 7777641 56776554436789999999999999999998888877764 478999999996664322
Q ss_pred --cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccC--CcHHHHHHHHHH
Q 013079 236 --ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI--PHLGLRMKEHCH 311 (450)
Q Consensus 236 --~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~--~~l~~~~~~~~~ 311 (450)
...+..++++|+||.+|.+|+|+ ||+++++++++.+...+.. ...+.+.+..+..++... ....+.++++.+
T Consensus 205 ~~~~~~~vi~~~SfSK~~gl~GlRv-Gy~v~~~~l~~~l~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 280 (364)
T PRK04781 205 LLARYDNLAVLRTLSKAHALAAARI-GSLIANAELIAVLRRCQAP---YPVPTPCAALAEQALSAPALAVTARRVAEVRA 280 (364)
T ss_pred HHhhCCCEEEEecChhhccccccee-eeeeCCHHHHHHHHhccCC---CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 12256799999999999999999 9999999999988876541 222334444443344332 234455667788
Q ss_pred HHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccc
Q 013079 312 RALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYET 390 (450)
Q Consensus 312 ~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s 390 (450)
+++.+.+.|++++. ....|. .|.++++++++. ..+.+.+... | +.+..|...
T Consensus 281 ~r~~l~~~L~~~~~~~~~~p~-------------------~g~f~~~~~~~~---~~~~~~l~~~---g-I~v~~~~~~- 333 (364)
T PRK04781 281 ERERLHAALAQLPGVRRVYPS-------------------QGNFLLVRFDDA---EAAFQALLAA---G-VVVRDQRAA- 333 (364)
T ss_pred HHHHHHHHHHhCCCCCeECCC-------------------CCcEEEEEcCCH---HHHHHHHHHC---C-eEEeeCCCC-
Confidence 89999999988743 223343 467899998743 4556666542 2 454444210
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 391 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
.+. +++||||+| . .+..+.|.++|++++
T Consensus 334 --------------------~~~-~~~~Ris~~-~---~~~~~~l~~al~~~~ 361 (364)
T PRK04781 334 --------------------PRL-SDALRITLG-T---PEQNDRVLAALQRTQ 361 (364)
T ss_pred --------------------CCC-CCeEEEeCC-C---HHHHHHHHHHHHHHH
Confidence 011 478999999 4 334455666665543
No 91
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=7.9e-27 Score=231.51 Aligned_cols=244 Identities=19% Similarity=0.195 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCC---CEEEEeCCCchhHHHHHHHhCCCccCe
Q 013079 101 VLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSG---GHVVAARTLYGGTHALLTHFFPRACNI 168 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~g---d~Vi~~~~~y~~~~~~~~~~~~~~~g~ 168 (450)
...||+.+++++ | .+ ++++|+| +++|+..++..++++| |+|+++.|+|+.+...+. ..|.
T Consensus 38 ~~~lr~aia~~~~~~~g~~~~~~~~Iiit~G---s~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~-----~~g~ 109 (350)
T TIGR03537 38 TKALREAISGWFERRFGVKLDPDAQVLPSAG---SKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGAL-----FAGG 109 (350)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEcCC---hHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHH-----hcCC
Confidence 455666666664 4 34 7899999 9999999999998887 699999999999988875 3678
Q ss_pred eEEEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC--c-
Q 013079 169 TTTFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS--P- 235 (450)
Q Consensus 169 ~v~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~--~- 235 (450)
++..++.+ |++++++++ +++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.+. +
T Consensus 110 ~~~~v~~~~~~~~~~d~~~l~~~~-~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 188 (350)
T TIGR03537 110 EPTAVKLKKEDGFLLRLEKVEKSI-LEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPH 188 (350)
T ss_pred EEEEcccCcccCCccCHHHHHHhh-hhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCC
Confidence 88777653 788999988 778999999999999999988 889999999999999999999554321 1
Q ss_pred --c--CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHH
Q 013079 236 --A--RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCH 311 (450)
Q Consensus 236 --~--~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~ 311 (450)
. ..+..+++.|+||.+|++|+|+ ||+++++++.+.+...+.... ...+...+.++...+....++.++.+++.+
T Consensus 189 ~~~~~~~~~~i~~~s~SK~~g~~GlRi-G~~~~~~~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~ 266 (350)
T TIGR03537 189 SALEVGIENVLAFHSLSKRSGMTGYRS-GFVAGDEKLISFLRKLRANFG-VASPDFVQAAAKAAWSDDNHVLERRKIFKR 266 (350)
T ss_pred chhhcCcCCEEEEeecccccCCccccc-eeeecCHHHHHHHHHHHHhhc-cCCCHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 1 1245699999999999999998 999999999988887654221 111112333333333333445556666788
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 312 RALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 312 ~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
+++.+.+.|++++..+..|. .|.++++.++.......+.+.|..
T Consensus 267 ~~~~~~~~l~~~g~~~~~~~-------------------g~~~~~~~~~~~~~~~~l~~~L~~ 310 (350)
T TIGR03537 267 KRDLFIEFFNKVGLEYLYPD-------------------ATFYLWVKVPSGIDAKDYALRLLE 310 (350)
T ss_pred HHHHHHHHHHHCCCcccCCC-------------------eEEEEEEECCCCCCHHHHHHHHHH
Confidence 88889999988765443332 355788998743235677777754
No 92
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.96 E-value=6.6e-27 Score=238.46 Aligned_cols=249 Identities=17% Similarity=0.150 Sum_probs=186.6
Q ss_pred HHHHHHHHHHhC-----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 102 LNLSRQMAALEG-----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 102 ~~l~~~iA~l~g-----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
..+++.++++++ .+++++|+| +++++.+++.+++++||.|++++|+|+.+...++ ..|.++..++.+
T Consensus 124 ~~lr~~ia~~~~~~~~~~~~Iiit~G---~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~-----~~g~~~~~v~~~ 195 (431)
T PRK15481 124 PELHAWAARWLRDDCPVAFEIDLTSG---AIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLR-----YAGFSASPVSVD 195 (431)
T ss_pred HHHHHHHHHHHhhccCCcCeEEEecC---cHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHH-----HcCCeEEeeccC
Confidence 457777777754 247899999 9999999999999999999999999999988876 367777777654
Q ss_pred ----CHHHHHHhhhcCCceEEEEe-cCCCCcccccCHH---HHHHHHHhc-CCEEEEeCCCCCCCCC----cc--CCCCe
Q 013079 177 ----DHEMVNSAIVQGRTKVLYFE-SISNPTLAVANIP---ELSRLAHDK-GVTVVVDNTFSPLVLS----PA--RLGAD 241 (450)
Q Consensus 177 ----d~~~l~~ai~~~~t~lv~i~-~~~NptG~v~~l~---~I~~la~~~-gi~livD~~~~~~~~~----~~--~~g~d 241 (450)
|+++|++++ +.++++++++ +||||||.+.+.+ +|.++|+++ ++++|+|++|..+..+ +. .....
T Consensus 196 ~~g~~~~~l~~~~-~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~v 274 (431)
T PRK15481 196 AEGMQPEKLERAL-AQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRW 274 (431)
T ss_pred CCCCCHHHHHHHH-hcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCE
Confidence 789999988 6789998887 9999999998865 999999999 9999999999655321 11 12467
Q ss_pred EEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCC---cHHHHHHHHHHHHHHHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP---HLGLRMKEHCHRALIFAR 318 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~---~l~~~~~~~~~~~~~l~~ 318 (450)
++++|+||.++ +|+|+ ||+++++++++.+....... ....+.+.+.++..++.... ++.+..+.+.++++.+.+
T Consensus 275 i~~~SfSK~~~-~GlRi-G~~i~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~ 351 (431)
T PRK15481 275 ALIRSVSKALG-PDLRL-AFVASDSATSARLRLRLNSG-TQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLAR 351 (431)
T ss_pred EEEeeeccccC-CCcee-EEEeCCHHHHHHHHHHHhcc-ccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 89999 99999999988886544411 12234445555555554332 244556667889999999
Q ss_pred HHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccc
Q 013079 319 RMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGY 387 (450)
Q Consensus 319 ~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~ 387 (450)
.|++++..+..|. .|.++|+.++.. ...+.+.+... | +.+..|+
T Consensus 352 ~L~~~~~~~~~p~-------------------gg~f~~~~l~~~--~~~~~~~l~~~---g-V~v~pg~ 395 (431)
T PRK15481 352 ALQQYGIAIPSPG-------------------DGLNLWLPLDTD--SQATALTLAKS---G-WLVREGE 395 (431)
T ss_pred HHHHcCCccccCC-------------------CeEEEEEECCCC--HHHHHHHHHHC---C-cEEecCC
Confidence 9998765443343 577999999742 34566666532 3 5555553
No 93
>PRK14012 cysteine desulfurase; Provisional
Probab=99.96 E-value=8.4e-28 Score=243.06 Aligned_cols=339 Identities=16% Similarity=0.147 Sum_probs=220.2
Q ss_pred ccCccccCC-HHHHHHhhc--CCCCCCCC-CccccCCCChhHHHHHHHHHHHhCCCe--EEEecChHHHHHHHHHHHHHh
Q 013079 64 ASATFTVME-PETMRRMFA--GELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTEA--AYCTASDKAGMSAISSVLMQL 137 (450)
Q Consensus 64 ~att~~~~~-~~~~~~~~~--~~~~n~~~-~~~y~r~~~~~~~~l~~~iA~l~g~~~--~~~tsg~~~gt~ai~~al~~l 137 (450)
+++++..++ .+++.+++. ..++||.+ .+..+....+.++++|+.+|+++|++. +++|+| ||+|+++++.++
T Consensus 10 a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g---~t~al~~~l~~l 86 (404)
T PRK14012 10 SATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSG---ATESDNLAIKGA 86 (404)
T ss_pred cCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCC---HHHHHHHHHHHH
Confidence 345554444 477777776 66787754 333333335678999999999999754 899999 999999998776
Q ss_pred c----cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCH
Q 013079 138 C----SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANI 208 (450)
Q Consensus 138 ~----~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l 208 (450)
. ++||+|++++++|+++...+..+ .+ .|+++.+++.+ |+++|++++ ++++++|++++++||||.+.|+
T Consensus 87 ~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~-~g~~~~~v~~~~~g~~d~~~l~~~i-~~~t~lv~~~~~~n~tG~~~~~ 163 (404)
T PRK14012 87 AHFYQKKGKHIITSKTEHKAVLDTCRQL-ER-EGFEVTYLDPQSNGIIDLEKLEAAM-RDDTILVSIMHVNNEIGVIQDI 163 (404)
T ss_pred HHhhcCCCCEEEEecCccHHHHHHHHHH-Hh-CCCEEEEEccCCCCcCCHHHHHHhc-CCCCEEEEEECcCCCccchhhH
Confidence 4 68999999999999887776433 22 58888888764 899999999 8899999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhh----hc
Q 013079 209 PELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL----ML 282 (450)
Q Consensus 209 ~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~----~~ 282 (450)
++|.++|+++|+++|+|+++ +...++....++|+++.|+||.+|++| + |+++.+++...++.....+.. ..
T Consensus 164 ~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g--~-G~l~~~~~~~~~~~~~~~g~~~~~~~~ 240 (404)
T PRK14012 164 AAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKG--I-GALYVRRKPRVRLEAQMHGGGHERGMR 240 (404)
T ss_pred HHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCc--e-EEEEEecCCCCCCCceecCCCccCCcc
Confidence 99999999999999999998 444455556689999999999988655 5 655544432222211100000 01
Q ss_pred cCCCc-hHHHHH-HHHc-cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013079 283 LGPTM-NPKVAF-ELSE-RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 358 (450)
Q Consensus 283 ~g~~~-~~~~a~-~~~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 358 (450)
.|... ....+. .++. .........++..++++++.+.|++++. .+..+.....| ....++|.
T Consensus 241 ~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~--------------~~~~~~~~ 306 (404)
T PRK14012 241 SGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVP--------------GNLNVSFN 306 (404)
T ss_pred CCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC--------------CEEEEEEe
Confidence 12111 111111 1111 1122344556667788888888877653 32211100000 11245555
Q ss_pred eCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCC----CCCeEEEEeCCCCCHHHHHHH
Q 013079 359 METEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGI----SAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 359 l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~----~~~~iRiS~g~~~~~~~~i~~ 434 (450)
+... ..++..|+. +.++.|..|......+. .....+++ ..+.||||++ ..+++++++.
T Consensus 307 ~~~~---~~~~~~l~~------~~i~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~iRls~~-~~~t~~dvd~ 368 (404)
T PRK14012 307 YVEG---ESLIMALKD------LAVSSGSACTSASLEPS--------YVLRALGLNDELAHSSIRFSLG-RFTTEEEIDY 368 (404)
T ss_pred CcCH---HHHHHhCCC------eEEEchhhhCCCCCCCC--------HHHHHcCCChhhcCceEEEEec-CCCCHHHHHH
Confidence 5432 345566653 67787766543211111 11122343 2578999999 8788888888
Q ss_pred HHHHHHHhh
Q 013079 435 FEKALSRMQ 443 (450)
Q Consensus 435 l~~al~~~~ 443 (450)
+.++|+++.
T Consensus 369 ~~~~l~~~~ 377 (404)
T PRK14012 369 AIELVRKSI 377 (404)
T ss_pred HHHHHHHHH
Confidence 877776653
No 94
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.96 E-value=9.1e-27 Score=232.65 Aligned_cols=263 Identities=15% Similarity=0.177 Sum_probs=182.2
Q ss_pred Cccc-ccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHH
Q 013079 56 GGVN-MSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVL 134 (450)
Q Consensus 56 ~~~~-~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al 134 (450)
|+++ .|+..+-+......+++.++-.+.-+.+...........+...++++.+|+++|.+.+++++| |++++..++
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g---~~~a~~~~~ 83 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHG---AREGKFAVM 83 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECC---hHHHHHHHH
Confidence 4455 366666655544456666654432111111112223335678899999999999999999999 999999999
Q ss_pred HHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-------CHHHHHHhhhc------CCceEEEEecCCCC
Q 013079 135 MQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-------DHEMVNSAIVQ------GRTKVLYFESISNP 201 (450)
Q Consensus 135 ~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-------d~~~l~~ai~~------~~t~lv~i~~~~Np 201 (450)
.+++++||+|+++.+.|.+....+. ..|.++..++.+ |+++|++++.. +++++|++++|+||
T Consensus 84 ~~l~~~gd~Vl~~~~~h~s~~~~~~-----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~ 158 (370)
T TIGR02539 84 HALCKEGDWVVLDGLAHYTSYVAAE-----RAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGE 158 (370)
T ss_pred HHhhCCCCEEEECCcccHHHHHHHH-----HcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCC
Confidence 9999999999999999877765543 368888888764 89999998832 36889999999999
Q ss_pred cccccCHHHHHHHHHhcCCEEEEeCCCCC--CCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhh
Q 013079 202 TLAVANIPELSRLAHDKGVTVVVDNTFSP--LVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA 279 (450)
Q Consensus 202 tG~v~~l~~I~~la~~~gi~livD~~~~~--~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~ 279 (450)
+|.+.|+++|.++|+++|+++|+|++|.. +..+....++|++++|+||++++ +.++ |++++++++++.+......+
T Consensus 159 ~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~-~g~~-G~l~~~~~~i~~l~~~~~~~ 236 (370)
T TIGR02539 159 YGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAA-SGPC-GVLGMSEEWEDIVLRKSRYS 236 (370)
T ss_pred CccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccC-CCCE-EEEEECHHHHhhhcccccCC
Confidence 99999999999999999999999999932 33344455789999999999995 4566 99999999998886654321
Q ss_pred hh----ccCCCc---hHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 013079 280 LM----LLGPTM---NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVL 328 (450)
Q Consensus 280 ~~----~~g~~~---~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~ 328 (450)
.. ..+.+. ....+..++........+..+..++++++.+.|+++++.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g~~~~ 292 (370)
T TIGR02539 237 PVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDIGFIQL 292 (370)
T ss_pred ccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 10 111111 22222222211111112233344455689999999887653
No 95
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.96 E-value=1e-27 Score=238.25 Aligned_cols=320 Identities=16% Similarity=0.142 Sum_probs=223.2
Q ss_pred ccCccccCCH-HHHHHhhcCCCCCCCC-CccccCCCChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhcc
Q 013079 64 ASATFTVMEP-ETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLCS 139 (450)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~n~~~-~~~y~r~~~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~~ 139 (450)
++++++.+.+ +++.+++...++||.+ .+.+++......+++++.+|+++|.+ .++||+| +++++++++.++..
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g---~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSG---ATESNNLAILGLAR 81 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCC---HHHHHHHHHHHHHH
Confidence 4555655554 7787777666788765 45666555567899999999999964 6899999 99999999988753
Q ss_pred ----CC-CEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHH
Q 013079 140 ----SG-GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIP 209 (450)
Q Consensus 140 ----~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~ 209 (450)
+| ++|+++..+|+++...+... .. .|+++++++.+ |++++++++ ++++++|++++++||||.+.|++
T Consensus 82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~-~~-~G~~v~~v~~~~~~~~d~~~l~~~l-~~~~~lv~~~~~~n~tG~~~~~~ 158 (353)
T TIGR03235 82 AGEQKGKKHIITSAIEHPAVLEPIRAL-ER-NGFTVTYLPVDESGRIDVDELADAI-RPDTLLVSIMHVNNETGSIQPIR 158 (353)
T ss_pred hcccCCCCeeeEcccccHHHHHHHHHH-Hh-cCCEEEEEccCCCCcCCHHHHHHhC-CCCCEEEEEEcccCCceeccCHH
Confidence 55 78999999999887776433 33 58888888754 889999999 78899999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHH--HHHHhh--hh--hh
Q 013079 210 ELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNS--MMDLHQ--GA--LM 281 (450)
Q Consensus 210 ~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~--l~~~~~--~~--~~ 281 (450)
+|.++|+++|+++|+|+++ +...++....++|+++.|+||++|++| + |+++.+++.... +..... +. ..
T Consensus 159 ~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g--~-g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (353)
T TIGR03235 159 EIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKG--I-GALVIRKRGKPKAPLKPIMFGGGQERGL 235 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCc--e-EEEEEccCcccccccCceeeCCCCcCcc
Confidence 9999999999999999997 555566666789999999999998777 4 777666553221 111000 00 00
Q ss_pred ccCCC-chH-HHHHHHHc-cCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013079 282 LLGPT-MNP-KVAFELSE-RIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 358 (450)
Q Consensus 282 ~~g~~-~~~-~~a~~~~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 358 (450)
..|.. ... .+...++. .....+.+.+++.++++++.+.|++.++++..+.-. ...++++|.
T Consensus 236 ~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~----------------~~~~i~~~~ 299 (353)
T TIGR03235 236 RPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAE----------------TIPHILNFS 299 (353)
T ss_pred ccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCccc----------------ccCCEEEEE
Confidence 11211 111 11111111 112345566778888899999998766665433211 134588888
Q ss_pred eCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCC----CeEEEEe
Q 013079 359 METEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISA----GLVRMSV 422 (450)
Q Consensus 359 l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~----~~iRiS~ 422 (450)
+++.+ .+.+...|.. + ++++.|..|+.... .+...+.++|+++ +.||||+
T Consensus 300 ~~~~~-~~~v~~~L~~-~----i~v~~g~~~~~~~~--------~~~~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 300 IDGVN-SEALIVNLRA-D----AAVSTGSACSSSKY--------EPSHVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred eCCcC-HHHHHHHHhC-C----eEEEchhhcCCCCC--------CCCHHHHHcCCCHHHhCccEEEeC
Confidence 87543 4566666653 2 78888877643221 1235677788864 7899986
No 96
>PRK08912 hypothetical protein; Provisional
Probab=99.96 E-value=5.1e-27 Score=236.07 Aligned_cols=242 Identities=19% Similarity=0.217 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 101 VLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
..++|+.+|+++ | ++ ++++|+| +++|+.+++..++++||+|+++.|.|+.+...+. ..|.++.
T Consensus 65 ~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G---~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~ 136 (387)
T PRK08912 65 LPELRQAVAAHYARFQGLDLDPETEVMVTSG---ATEALAAALLALVEPGDEVVLFQPLYDAYLPLIR-----RAGGVPR 136 (387)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCcccEEEeCC---cHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHH-----HcCCEEE
Confidence 456777777654 3 34 7899999 9999999999999999999999999999887775 3677777
Q ss_pred EeCCC------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------c
Q 013079 172 FVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------A 236 (450)
Q Consensus 172 ~v~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~ 236 (450)
+++.+ |++++++++ .+++++|++++||||||.+.+ +++|.++|+++++++|+|++|..+.++. .
T Consensus 137 ~~~~~~~~~~~~~~~l~~~~-~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 215 (387)
T PRK08912 137 LVRLEPPHWRLPRAALAAAF-SPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLM 215 (387)
T ss_pred EEecCcccCcCCHHHHHHHh-CccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChh
Confidence 66543 689999988 778999999999999999986 6679999999999999999985443221 1
Q ss_pred C----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-CCcHHHHHHHHHH
Q 013079 237 R----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHCH 311 (450)
Q Consensus 237 ~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~~ 311 (450)
. .+.+++++|+||.+|.+|+|+ ||+++++++++.+....... ....+...+.++...+.. .+++.+..+++.+
T Consensus 216 ~~~~~~~~~i~~~S~SK~~g~~GlRi-G~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 293 (387)
T PRK08912 216 TLPGMRERTVKIGSAGKIFSLTGWKV-GFVCAAPPLLRVLAKAHQFL-TFTTPPNLQAAVAYGLGKPDDYFEGMRADLAR 293 (387)
T ss_pred hCCCccCceEEEeechhhccCcCcee-EEEecCHHHHHHHHHHHhhc-cccCChHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 1 146899999999999999998 99999999988886654411 112222233333333322 2344555566788
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC---HHHHHHHHHHh
Q 013079 312 RALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET---EEKANRLMNYL 372 (450)
Q Consensus 312 ~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~---~~~~~~~~~~l 372 (450)
+++.+.+.|++++..+..|. .|.++|+.++. ......|.+.+
T Consensus 294 ~~~~l~~~L~~~g~~~~~~~-------------------g~~~l~~~l~~~~~~~~~~~~~~~l 338 (387)
T PRK08912 294 SRDRLAAGLRRIGFPVLPSQ-------------------GTYFLTVDLAPLGLAEDDVAFCRRL 338 (387)
T ss_pred HHHHHHHHHHhCCCcccCCC-------------------cceEEEecccccCCCCCHHHHHHHH
Confidence 89999999998765543221 45678888863 12345666665
No 97
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=3.6e-27 Score=235.51 Aligned_cols=279 Identities=16% Similarity=0.205 Sum_probs=202.3
Q ss_pred hHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-
Q 013079 100 TVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS- 176 (450)
Q Consensus 100 ~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~- 176 (450)
...++++.+|++++. +.+++|+| +++++++++.+++++||+|+++.|.|..+...+. ..|.++..++.+
T Consensus 68 ~~~~lr~~ia~~~~~~~~~i~~t~G---~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-----~~g~~~~~~~~~~ 139 (367)
T PRK02731 68 SGFELKAALAEKFGVDPERIILGNG---SDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQ-----AVGAKPVEVPAKD 139 (367)
T ss_pred cHHHHHHHHHHHhCcCHHHEEEcCC---HHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHH-----HcCCeEEEecccC
Confidence 346899999999986 46899999 9999999999889999999999999987766553 267888877653
Q ss_pred ---CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc--CCEEEEeCCCCCCCCC-----cc----CCCCeE
Q 013079 177 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSPLVLS-----PA----RLGADV 242 (450)
Q Consensus 177 ---d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~~~~~-----~~----~~g~di 242 (450)
|++++++++ ++++++|++++|+||||.+.+.++|.++++.. |+++|+|++|..+... .. .....+
T Consensus 140 ~~~~~~~l~~~~-~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i 218 (367)
T PRK02731 140 YGHDLDAMLAAV-TPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVV 218 (367)
T ss_pred CCCCHHHHHHHh-CCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEE
Confidence 889999998 78899999999999999999999999999874 8999999998433221 11 114578
Q ss_pred EEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013079 243 VVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 243 ~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
+++|+||.+|.+|+|+ ||+++++++++.+...... ...+.+.+.++...+....++.+..+.+.++++.+.+.|++
T Consensus 219 ~~~S~SK~~g~~G~Ri-G~l~~~~~~~~~l~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 294 (367)
T PRK02731 219 VTRTFSKAYGLAGLRV-GYGIAPPEIIDALNRVRQP---FNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAE 294 (367)
T ss_pred EEeeehHhhcCcccce-eeeeCCHHHHHHHHHccCC---CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999998 9999999998888765441 22333444444444433333444455567788889999988
Q ss_pred CCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCC
Q 013079 323 LGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSE 402 (450)
Q Consensus 323 ~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~ 402 (450)
++..+. |. .|+++++.++.......|.+.|.. .| +.+..|..
T Consensus 295 ~g~~~~-~~-------------------~g~~~~i~~~~~~~~~~~~~~L~~---~g-I~v~~~~~-------------- 336 (367)
T PRK02731 295 LGLEYI-PS-------------------VGNFILVDFDDGKDAAEAYQALLK---RG-VIVRPVAG-------------- 336 (367)
T ss_pred CCCccC-CC-------------------CceEEEEECCCCCCHHHHHHHHHH---CC-EEEEeCCC--------------
Confidence 765432 22 367899999643345677777764 23 45544321
Q ss_pred CCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 403 LNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 403 ~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.+ .+++||||++ . .+.++.+.++|.++
T Consensus 337 --------~~-~~~~iRis~~-~---~~e~~~l~~aL~~~ 363 (367)
T PRK02731 337 --------YG-LPNALRITIG-T---EEENRRFLAALKEF 363 (367)
T ss_pred --------CC-CCCeEEEecC-C---HHHHHHHHHHHHHH
Confidence 11 1468999999 3 23445555555544
No 98
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.2e-26 Score=233.99 Aligned_cols=283 Identities=17% Similarity=0.175 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 101 VLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
..+||+.+|+++ | .+ .+++|+| +++|+..++.+++++||+|++++|+|+.+...+. ..|.++.
T Consensus 75 ~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G---~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~ 146 (394)
T PRK05942 75 TASFRQAITDWYHRRYGVELDPDSEALPLLG---SKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPL-----IAGAQIY 146 (394)
T ss_pred CHHHHHHHHHHHHHHHCCCcCCCCeEEEccC---hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----HcCCEEE
Confidence 456777777765 3 34 3788999 9999999999999999999999999999877664 2577777
Q ss_pred EeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------
Q 013079 172 FVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ 235 (450)
Q Consensus 172 ~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------ 235 (450)
.++.+ |++++++++ .+++++|++++||||||.+.+ +++|.++|+++|+++|+|++|..+.++.
T Consensus 147 ~v~~~~~~~~~~d~~~l~~~~-~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~ 225 (394)
T PRK05942 147 PIILKPENDWLIDLSSIPEEV-AQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSL 225 (394)
T ss_pred EeecCCccCCccCHHHHHHhc-cccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCCh
Confidence 76542 688998888 789999999999999999987 7789999999999999999985443321
Q ss_pred cCC----CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccC-CcHHHHHHHHH
Q 013079 236 ARL----GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHC 310 (450)
Q Consensus 236 ~~~----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~ 310 (450)
..+ +.+++++|+||.+|.+|+|+ ||++.++++++.+....... ....+.+.+.++..++... +++.+..+++.
T Consensus 226 ~~~~~~~~~~i~~~SfSK~~~~~GlRi-G~i~~~~~l~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 303 (394)
T PRK05942 226 LEIPGAKDIGVEFHTLSKTYNMAGWRV-GFVVGNRHIIQGLRTLKTNL-DYGIFSALQKAAETALQLPDSYLQQVQERYR 303 (394)
T ss_pred hhCCCccccEEEEecchhccCChhhhe-eeeecCHHHHHHHHHHHhhc-ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 111 34688999999999999998 99999999999887665411 1222334444444444332 23444555678
Q ss_pred HHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHH-hhcccccccccccccccc
Q 013079 311 HRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNY-LQNYAQFGFMAVSLGYYE 389 (450)
Q Consensus 311 ~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~-l~~~~~~g~i~vs~G~~~ 389 (450)
++++.+.+.|++.+..+..|. .|.++|+.++......++... +.. .| +.+..|+..
T Consensus 304 ~~~~~~~~~L~~~~~~~~~~~-------------------~~~f~~~~~~~~~~~~~~~~~~l~~---~g-V~v~~g~~f 360 (394)
T PRK05942 304 TRRDFLIQGLGELGWNIPPTK-------------------ATMYLWVPCPVGMGSTDFALNVLQK---TG-VVVTPGNAF 360 (394)
T ss_pred HHHHHHHHHHHHCCCeecCCC-------------------eeeEEEEECCCCCCHHHHHHHHHHH---CC-EEEeCChhh
Confidence 888889999988765443222 345889998732123344443 332 22 444444221
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 390 TLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 390 s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
. ....++||||++ .+ . +.|.++|+++.+
T Consensus 361 ~---------------------~~~~~~iRis~~-~~-~----~~l~~~l~~l~~ 388 (394)
T PRK05942 361 G---------------------EGGEGYVRISLI-AD-C----DRLGEALDRLKQ 388 (394)
T ss_pred C---------------------cCCCCeEEEEec-CC-H----HHHHHHHHHHHH
Confidence 0 011478999999 53 3 455555555543
No 99
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.96 E-value=8.8e-27 Score=235.43 Aligned_cols=231 Identities=16% Similarity=0.169 Sum_probs=171.0
Q ss_pred hhHHHHHHHHHHHhC-------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 99 PTVLNLSRQMAALEG-------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g-------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
+...++++.||++++ .+++++|+| +++|+.+++.+++++||+|+++.|+|..+...+. ..|.++.
T Consensus 73 ~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G---~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~-----~~g~~v~ 144 (401)
T TIGR01264 73 VGALSAREAIASYYHNPDGPIEADDVVLCSG---CSHAIEMCIAALANAGQNILVPRPGFPLYETLAE-----SMGIEVK 144 (401)
T ss_pred CCCHHHHHHHHHHHhhcCCCCCHHHEEECcC---hHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHH-----HcCCEEE
Confidence 345678888888875 356899999 9999999999999999999999999998887765 3677777
Q ss_pred EeCC-------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------
Q 013079 172 FVDI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ 235 (450)
Q Consensus 172 ~v~~-------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------ 235 (450)
.++. .|++.+++++ +.++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++.
T Consensus 145 ~~~~~~~~~~~~d~~~l~~~~-~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 223 (401)
T TIGR01264 145 LYNLLPDKSWEIDLKQLESLI-DEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPL 223 (401)
T ss_pred EeecCCccCCCCCHHHHHHHh-ccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccH
Confidence 7654 2789999888 778999999999999999975 7889999999999999999996654321
Q ss_pred cCC---CCeEEEeCCCCccccCccceEEEEEcCH------HHHHHHHHHhhhhhhccCCCchHHHHHHHHcc--CCcHHH
Q 013079 236 ARL---GADVVVHSISKFISGGADIIAGAVCGPA------NLVNSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLGL 304 (450)
Q Consensus 236 ~~~---g~di~~~S~sK~~g~~g~~igG~l~~~~------~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~~ 304 (450)
..+ ...++++|+||.++.+|+|+ ||+++++ ++++.+...... ....+.+.+.++..++.. .+++..
T Consensus 224 ~~~~~~~~vi~~~SfSK~~~~~GlRi-G~iv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~l~~ 300 (401)
T TIGR01264 224 ASLSSTVPILSCGGLAKRWLVPGWRL-GWIIIHDRRGILRDIRDGLVKLSQR--ILGPCTIVQGALPSILLRTPQEYFDG 300 (401)
T ss_pred HHcCCCCcEEEEccCcccCCCccceE-EEEEecCcchhHHHHHHHHHHHhhc--cCCCCcHHHHHHHHHHHhCcHHHHHH
Confidence 111 23689999999999999999 9998763 334444333220 012244455555444432 244555
Q ss_pred HHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 305 RMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 305 ~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
..+++.++++.+.+.|++++ ..+..|. .|.++|+.++
T Consensus 301 ~~~~~~~~r~~l~~~L~~~~~~~~~~p~-------------------~g~f~~~~~~ 338 (401)
T TIGR01264 301 TLSVLESNAMLCYGALAAVPGLRPVMPS-------------------GAMYMMVGIE 338 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcccCCC-------------------eeeEEEEEec
Confidence 66677888999999998873 2333332 5778999875
No 100
>PRK07777 aminotransferase; Validated
Probab=99.96 E-value=1.6e-26 Score=232.51 Aligned_cols=254 Identities=21% Similarity=0.270 Sum_probs=182.9
Q ss_pred HHHHHHHHHHH----hCC----C-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 101 VLNLSRQMAAL----EGT----E-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 101 ~~~l~~~iA~l----~g~----~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
..++++.++++ +|. + ++++|+| +++|+.+++.+++.+||+|++..|.|+.+...+. ..|.++.
T Consensus 63 ~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G---~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~-----~~g~~~~ 134 (387)
T PRK07777 63 IPELRAAIAAQRRRRYGLEYDPDTEVLVTVG---ATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIA-----MAGAHRV 134 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEeCC---cHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHH-----HCCCEEE
Confidence 45566666654 453 2 5899999 9999999999999999999999999999887764 2465655
Q ss_pred EeCC--------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-----c
Q 013079 172 FVDI--------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS-----P 235 (450)
Q Consensus 172 ~v~~--------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~-----~ 235 (450)
.++. .|++++++++ ++++++|++++|+||||.+.+ +++|.++|+++++++|+|++|..+.++ +
T Consensus 135 ~~~~~~~~~~~~~d~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~ 213 (387)
T PRK07777 135 PVPLVPDGRGFALDLDALRAAV-TPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLP 213 (387)
T ss_pred EeecCCccCCCcCCHHHHHHhc-CcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCccc
Confidence 5543 2788999988 778999999999999999965 889999999999999999998554321 1
Q ss_pred -cC----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-CCcHHHHHHHH
Q 013079 236 -AR----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEH 309 (450)
Q Consensus 236 -~~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~ 309 (450)
.. .+.++++.|+||.+|++|+|+ ||+++++++++.+...... .....+.+.+.++..++.. .+++....+.+
T Consensus 214 ~~~~~~~~~~~i~~~S~SK~~g~~GlRi-G~~~~~~~l~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 291 (387)
T PRK07777 214 LATLPGMRERTVTISSAAKTFNVTGWKI-GWACGPAPLIAAVRAAKQY-LTYVGGAPFQPAVAHALDHEDAWVAALRDSL 291 (387)
T ss_pred HhhCCCCcCcEEEEeechhhccCcCcee-EEEecCHHHHHHHHHHHhh-cccCCCCHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 11 247899999999999999999 9999999988888765441 1123444444444444432 34455555667
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhcccccccccccccc
Q 013079 310 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQNYAQFGFMAVSLGY 387 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~~~l~~~~~~g~i~vs~G~ 387 (450)
.++++.+.+.|++++.++..|. .|.++|+.++. ......|.+.|.. +.| +.+..|.
T Consensus 292 ~~~~~~l~~~L~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~~~~~~~~~l~~--~~g-v~v~pg~ 349 (387)
T PRK07777 292 QAKRDRLAAGLAEAGFEVHDSA-------------------GTYFLCADPRPLGYDDGTEFCRALPE--RVG-VAAIPMS 349 (387)
T ss_pred HHHHHHHHHHHHhCCCCccCCC-------------------cceEEEecccccCCCCHHHHHHHHHH--hCC-EEEeCch
Confidence 8899999999988765543222 35578878642 1235667777742 123 5666553
No 101
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=1.6e-26 Score=230.30 Aligned_cols=245 Identities=18% Similarity=0.229 Sum_probs=181.9
Q ss_pred HHHHHHhhcCCCCCCCC-CccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCc
Q 013079 73 PETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLY 151 (450)
Q Consensus 73 ~~~~~~~~~~~~~n~~~-~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y 151 (450)
.+.+.++. ..++||++ .+..+...+|..+++++.+|+++|.+++++|+| +++++.+++.+++++||+|+++.+.|
T Consensus 18 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g---~t~al~~~l~~~~~~gd~Vl~~~~~~ 93 (361)
T cd06452 18 RKALIEWG-DGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPG---AREGKFAVMHSLCEKGDWVVVDGLAH 93 (361)
T ss_pred HHHHHHHh-cccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCC---HHHHHHHHHHHhcCCCCEEEEcCCcc
Confidence 36777776 44688765 566676778899999999999999999999999 99999999999999999999999998
Q ss_pred hhHHHHHHHhCCCccCeeEEEeCCC-------CHHHHHHhhhc------CCceEEEEecCCCCcccccCHHHHHHHHHhc
Q 013079 152 GGTHALLTHFFPRACNITTTFVDIS-------DHEMVNSAIVQ------GRTKVLYFESISNPTLAVANIPELSRLAHDK 218 (450)
Q Consensus 152 ~~~~~~~~~~~~~~~g~~v~~v~~~-------d~~~l~~ai~~------~~t~lv~i~~~~NptG~v~~l~~I~~la~~~ 218 (450)
.+....+. ..|+++.+++.+ |++++++++.. +++++|++++|+||||.+.|+++|.++|+++
T Consensus 94 ~~~~~~~~-----~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~ 168 (361)
T cd06452 94 YTSYVAAE-----RAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEY 168 (361)
T ss_pred hHHHHHHH-----hcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHc
Confidence 88765543 368888887642 78899888831 3789999999999999999999999999999
Q ss_pred CCEEEEeCCCC--CCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhh----hhccCCCchHHHH
Q 013079 219 GVTVVVDNTFS--PLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA----LMLLGPTMNPKVA 292 (450)
Q Consensus 219 gi~livD~~~~--~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~----~~~~g~~~~~~~a 292 (450)
|+++|+|++|. .+.++..++++|+++.|+||++++++ ++ |+++.++++++.+...+... ....+.+.....+
T Consensus 169 ~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~-~~-G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
T cd06452 169 GVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASA-PI-GVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPL 246 (361)
T ss_pred CCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCC-Ce-EEEEECHHHHHHHhccccccccceeeeeccccCchHH
Confidence 99999999983 33455666789999999999998554 66 99999988888876544311 0011222211111
Q ss_pred HHHHccCCcHH---HHHHHHHHHHHHHHHHHHhC-CCeee
Q 013079 293 FELSERIPHLG---LRMKEHCHRALIFARRMKKL-GLKVL 328 (450)
Q Consensus 293 ~~~~~~~~~l~---~~~~~~~~~~~~l~~~L~~~-~~~v~ 328 (450)
..+...++.+. .+..+..++++++.+.|+++ ++++.
T Consensus 247 ~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~ 286 (361)
T cd06452 247 VTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGIKQL 286 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 11111222222 23333445567899999988 55654
No 102
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=1.3e-26 Score=233.00 Aligned_cols=242 Identities=17% Similarity=0.190 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 101 VLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
...+++.+|+++ | .+ .+++|+| +++++.+++..++++||+|++++|+|+.+...+. ..|.++.
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G---~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~-----~~g~~~~ 142 (385)
T PRK09276 71 MLEFRKAVADWYKRRFGVELDPETEVISLIG---SKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTI-----FAGGEPY 142 (385)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEccC---cHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHH-----HcCCEEE
Confidence 456777777765 3 23 3788899 9999999999999999999999999998887764 2577777
Q ss_pred EeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC---c---
Q 013079 172 FVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS---P--- 235 (450)
Q Consensus 172 ~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~---~--- 235 (450)
.++.+ |++++++.+ .+++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++ +
T Consensus 143 ~v~~~~~~g~~~d~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 221 (385)
T PRK09276 143 FMPLKEENGFLPDLDAIPEDV-AKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSF 221 (385)
T ss_pred EEecCCCCCCcCCHHHHHHhc-cccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCCh
Confidence 66542 678888888 678999999999999999987 578899999999999999999554321 1
Q ss_pred cC----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-CCcHHHHHHHHH
Q 013079 236 AR----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHC 310 (450)
Q Consensus 236 ~~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~ 310 (450)
.. .+.++++.|+||.+|.+|+|+ ||+++++++++.+...+... ....+.+.+.++..++.. ..++....+++.
T Consensus 222 ~~~~~~~~~~i~~~S~SK~~g~~GlRi-G~~i~~~~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 299 (385)
T PRK09276 222 LEVPGAKDVGIEFHSLSKTYNMTGWRI-GFAVGNADLIAGLGKVKSNV-DSGVFQAIQEAGIAALNGPQEVVEELRKIYQ 299 (385)
T ss_pred hccCCCcCCEEEEecchhhcCCcchhh-eeeeCCHHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 11 135788999999999999999 99999999998887765411 111222333344344432 233445555678
Q ss_pred HHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHh
Q 013079 311 HRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYL 372 (450)
Q Consensus 311 ~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l 372 (450)
++++.+.+.|++++..+..|. .|.++++.++.......+...+
T Consensus 300 ~~~~~l~~~L~~~~~~~~~~~-------------------~~~~~~v~~~~~~~~~~l~~~l 342 (385)
T PRK09276 300 ERRDILVEGLRKLGLEVEPPK-------------------ATFYVWAPVPKGYTSAEFATLL 342 (385)
T ss_pred HHHHHHHHHHHhCCCcccCCC-------------------cceEEEEECCCCCCHHHHHHHH
Confidence 888999999988765443332 3456899887432345566554
No 103
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.96 E-value=7.5e-27 Score=236.58 Aligned_cols=267 Identities=16% Similarity=0.189 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHhC--------------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCcc
Q 013079 101 VLNLSRQMAALEG--------------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRAC 166 (450)
Q Consensus 101 ~~~l~~~iA~l~g--------------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~ 166 (450)
..+||+.||++++ .+++++|+| +++++.+++..++.+||+|+++.|+|..+...+. ..
T Consensus 77 ~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G---~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-----~~ 148 (412)
T PTZ00433 77 SPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSG---VSHAILMALTALCDEGDNILVPAPGFPHYETVCK-----AY 148 (412)
T ss_pred cHHHHHHHHHHHHhhccccccccCCCChhhEEEeCC---hHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHH-----Hc
Confidence 5668888888764 356899999 9999999999999999999999999999887775 36
Q ss_pred CeeEEEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-
Q 013079 167 NITTTFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP- 235 (450)
Q Consensus 167 g~~v~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~- 235 (450)
|.++.+++.+ |++++++++ ++++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++.
T Consensus 149 g~~~~~i~~~~~~~~~~d~~~l~~~~-~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 227 (412)
T PTZ00433 149 GIEMRFYNCRPEKDWEADLDEIRRLV-DDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA 227 (412)
T ss_pred CCEEEEEecCccccCcCCHHHHHHHh-ccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC
Confidence 7777777642 688999888 778999999999999999865 7788999999999999999996654321
Q ss_pred -----cCC---CCeEEEeCCCCccccCccceEEEEEc--C----HHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-C-
Q 013079 236 -----ARL---GADVVVHSISKFISGGADIIAGAVCG--P----ANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-I- 299 (450)
Q Consensus 236 -----~~~---g~di~~~S~sK~~g~~g~~igG~l~~--~----~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~- 299 (450)
..+ ...++++|+||.+|.+|+|+ ||++. + +++++.+...... ....+.+.+.++..++.. .
T Consensus 228 ~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRl-G~~i~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~q~a~~~~l~~~~~ 304 (412)
T PTZ00433 228 TFTSVADFDTTVPRVILGGTAKNLVVPGWRL-GWLLLVDPHGNGGDFLDGMKRLGML--VCGPCSVVQAALGEALLNTPQ 304 (412)
T ss_pred CccchhhccCCCceEEEccchhhcCCCCeeE-EEEEEeCCcccHHHHHHHHHHHhhc--cCCCChHHHHHHHHHHhcCcH
Confidence 111 23588999999999999999 99985 2 3466666554321 122344444444444432 1
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-----HHHHHHHHHhh
Q 013079 300 PHLGLRMKEHCHRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-----EKANRLMNYLQ 373 (450)
Q Consensus 300 ~~l~~~~~~~~~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-----~~~~~~~~~l~ 373 (450)
.++.+..++++++++.+.+.|+++ +..+..|. .|.++|+.++.. .....|.+.+.
T Consensus 305 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~-------------------gg~f~~~~l~~~~~~~~~~~~~~~~~ll 365 (412)
T PTZ00433 305 EHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPR-------------------GSMFLMSRLDLEKFRDIKSDVEFYEKLL 365 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCC-------------------eeEEEEEEechhhcCCCCCHHHHHHHHH
Confidence 335555566788889999999875 33333332 466889888631 12456666664
Q ss_pred ccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC
Q 013079 374 NYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL 425 (450)
Q Consensus 374 ~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~ 425 (450)
. ..| +.+..|+.+ +. ++++|||++ .
T Consensus 366 ~--~~g-V~v~pg~~f----------------------~~-~~~iRis~~-~ 390 (412)
T PTZ00433 366 E--EEN-VQVLPGEIF----------------------HM-PGFTRLTIS-R 390 (412)
T ss_pred H--hcC-EEEeCcccc----------------------CC-CCeEEEEec-C
Confidence 2 123 455544321 11 368999999 6
No 104
>PRK07683 aminotransferase A; Validated
Probab=99.96 E-value=3.1e-26 Score=230.29 Aligned_cols=219 Identities=21% Similarity=0.313 Sum_probs=167.5
Q ss_pred hhHHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 99 PTVLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 99 ~~~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
+...++|+.+|+++ | .+ ++++|+| +++|+.+++..++++||+|+++.|.|+.+...+. ..|.+
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G---~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~ 136 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHYSPESEIIVTIG---ASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIR-----LCGAK 136 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCC---hHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHH-----HcCCE
Confidence 34567888888876 2 34 7899999 9999999999999999999999999999887764 36888
Q ss_pred EEEeCCC------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-----c
Q 013079 170 TTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS-----P 235 (450)
Q Consensus 170 v~~v~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~-----~ 235 (450)
+.+++.+ |.+++++.+ ++++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++ .
T Consensus 137 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 215 (387)
T PRK07683 137 PVFIDTRSTGFRLTAEALENAI-TEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSI 215 (387)
T ss_pred EEEeecCcccCCCCHHHHHHhc-CcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCCh
Confidence 8888754 568898888 778999999999999999965 788999999999999999999655322 1
Q ss_pred cCC----CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc-CCcHHHHHHHHH
Q 013079 236 ARL----GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER-IPHLGLRMKEHC 310 (450)
Q Consensus 236 ~~~----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~-~~~l~~~~~~~~ 310 (450)
..+ +.++++.|+||.+|.+|.|+ ||+++++++++.+..... ......+.+.+.++..++.. ..++.+..+++.
T Consensus 216 ~~~~~~~~~vi~~~s~SK~~~~pGlRi-G~i~~~~~l~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 293 (387)
T PRK07683 216 AHFPEMREKTIVINGLSKSHSMTGWRI-GFLFAPSYLAKHILKVHQ-YNVTCASSISQYAALEALTAGKDDAKMMRHQYK 293 (387)
T ss_pred hhccCCcCCeEEEeeccccccCcccee-EEEEcCHHHHHHHHHHHH-hccCCCChHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 111 46799999999999999999 999999999988876543 21122233444444444432 234444455678
Q ss_pred HHHHHHHHHHHhCCCeee
Q 013079 311 HRALIFARRMKKLGLKVL 328 (450)
Q Consensus 311 ~~~~~l~~~L~~~~~~v~ 328 (450)
++++.+.+.|++.+..+.
T Consensus 294 ~~~~~~~~~l~~~~~~~~ 311 (387)
T PRK07683 294 KRRDYVYNRLISMGLDVE 311 (387)
T ss_pred HHHHHHHHHHHHcCCccc
Confidence 888899999988755443
No 105
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.96 E-value=9.6e-27 Score=234.37 Aligned_cols=244 Identities=16% Similarity=0.212 Sum_probs=180.3
Q ss_pred hhHHHHHHHHHHHh----C----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 99 PTVLNLSRQMAALE----G----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 99 ~~~~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
+...++|+.+|+++ | .+++++|+| +++|+.+++.+++++||+|++++|+|.++...+. ..|.++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G---~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~-----~~g~~~ 141 (391)
T PRK08361 70 AGIPELREAIAEYYKKFYGVDVDVDNVIVTAG---AYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAK-----IAEAKP 141 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCC---hHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHH-----HcCCEE
Confidence 34567888888875 3 357899999 9999999999999999999999999999887664 257777
Q ss_pred EEeCC-------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----
Q 013079 171 TFVDI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP----- 235 (450)
Q Consensus 171 ~~v~~-------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~----- 235 (450)
..++. .|++++++++ ++++++|++++|+||||.+.+ +++|+++|+++++++|+|++|..+.++.
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~i-~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 220 (391)
T PRK08361 142 IRIPLREENEFQPDPDELLELI-TKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYP 220 (391)
T ss_pred EEEecCCccCCCCCHHHHHHhc-ccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCC
Confidence 77654 2789999988 778999999999999999998 8899999999999999999996553221
Q ss_pred -c--CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCC---cHHHHHHHH
Q 013079 236 -A--RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP---HLGLRMKEH 309 (450)
Q Consensus 236 -~--~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~---~l~~~~~~~ 309 (450)
. ....++++.|+||.+|.+|+|+ ||+++++++++.+..... ......+.+.+.++..++.... ++....+++
T Consensus 221 ~~~~~~~~~i~~~s~SK~~~~~GlRi-G~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 298 (391)
T PRK08361 221 MIKYAPDNTILANSFSKTFAMTGWRL-GFVIAPEQVIKDMIKLHA-YIIGNVASFVQIAGIEALRSKESWKAVEEMRKEY 298 (391)
T ss_pred HhhcCCCCEEEEecCchhcCCcHhhh-hhhccCHHHHHHHHHHHh-hhccCCChHHHHHHHHHhcCCcccHHHHHHHHHH
Confidence 1 1246899999999999999998 999999998888766543 1112223334444444443322 245555667
Q ss_pred HHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHh
Q 013079 310 CHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYL 372 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~~~~~l 372 (450)
.++++.+.+.|++++ ..+..|. .|.++|+.++. .....+|.+.+
T Consensus 299 ~~~~~~~~~~L~~~~~~~~~~p~-------------------g~~~~~~~l~~~~~~~~~l~~~l 344 (391)
T PRK08361 299 NERRKLVLKRLKEMPHIKVFEPK-------------------GAFYVFANIDETGMSSEDFAEWL 344 (391)
T ss_pred HHHHHHHHHHHHhCCCCeecCCC-------------------EEEEEEEECCCCCCCHHHHHHHH
Confidence 888888999998863 3433332 35578888863 11245566555
No 106
>PRK09105 putative aminotransferase; Provisional
Probab=99.96 E-value=7e-27 Score=233.22 Aligned_cols=277 Identities=17% Similarity=0.199 Sum_probs=197.3
Q ss_pred ChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 98 NPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
.+...+|++.||+.+|. +++++|+| +++++.+++.+++++||+|++++|+|+.+...+. ..|.++..++.
T Consensus 77 ~~~~~~Lr~aia~~~~v~~e~I~it~G---s~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~-----~~g~~~~~v~~ 148 (370)
T PRK09105 77 LELEDDLRTLFAAQEGLPADHVMAYAG---SSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAAD-----AQGAPVAKVPL 148 (370)
T ss_pred CchHHHHHHHHHHHhCcChhhEEEcCC---hHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHH-----HcCCeEEEecC
Confidence 34478899999999874 56899999 9999999999999999999999999999987765 36777777764
Q ss_pred C-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc--cC----CCCeE
Q 013079 176 S-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP--AR----LGADV 242 (450)
Q Consensus 176 ~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~--~~----~g~di 242 (450)
+ |++++++. .+++++|++++||||||.+.+.++|.++++. +++++|+||+|..+...+ .. ....+
T Consensus 149 ~~~~~~d~~~l~~~--~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 149 RADGAHDVKAMLAA--DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCCCCCHHHHHhc--CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEE
Confidence 3 67788765 3578999999999999999998888887754 489999999994443221 11 13568
Q ss_pred EEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013079 243 VVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 243 ~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
++.|+||.+|++|+|+ ||+++++++++.+... . . ...+.+.+.++..++...+++....+++.++++.+.+.|++
T Consensus 227 ~~~SfSK~~g~~GlRi-G~~v~~~~~i~~l~~~-~-~--~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~ 301 (370)
T PRK09105 227 VLRTFSKLYGMAGMRL-GLAAARPDLLAKLARF-G-H--NPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKK 301 (370)
T ss_pred EEecccHhhcCCccce-eeeecCHHHHHHHHhc-C-C--CCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999 9999999999888655 2 1 22333333444444444344555566778899999999998
Q ss_pred CCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCC
Q 013079 323 LGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSE 402 (450)
Q Consensus 323 ~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~ 402 (450)
+++.+..| .|+++.+.++. ....+.+.|... | +.+ |..+ +
T Consensus 302 ~g~~~~~~--------------------~~~f~~~~~~~--~~~~l~~~L~~~---g-I~v--~~~~-----~------- 341 (370)
T PRK09105 302 KGYKCTPS--------------------QANCFMVDVKR--PAKAVADAMAKQ---G-VFI--GRSW-----P------- 341 (370)
T ss_pred CCCCcCCC--------------------CCcEEEEeCCC--CHHHHHHHHHHC---C-cEE--ecCC-----C-------
Confidence 76544322 24466677752 234566666542 2 333 3111 0
Q ss_pred CCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 403 LNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 403 ~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
..++++|||++ . ++..+.|.++|+.+.
T Consensus 342 ----------~~~~~~Ris~~-~---~~~~~~l~~al~~~~ 368 (370)
T PRK09105 342 ----------IWPNWVRVTVG-S---EEEMAAFRSAFAKVM 368 (370)
T ss_pred ----------CCCCeEEEEcC-C---HHHHHHHHHHHHHHh
Confidence 01478999999 4 233566666666543
No 107
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.96 E-value=1.6e-26 Score=233.18 Aligned_cols=238 Identities=19% Similarity=0.167 Sum_probs=173.7
Q ss_pred HHHHHHHHHHh----CC-----C-eEEEecChHHHHHHHHHHHHHhccC---CCEEEEeCCCchhHHHHHHHhCCCccCe
Q 013079 102 LNLSRQMAALE----GT-----E-AAYCTASDKAGMSAISSVLMQLCSS---GGHVVAARTLYGGTHALLTHFFPRACNI 168 (450)
Q Consensus 102 ~~l~~~iA~l~----g~-----~-~~~~tsg~~~gt~ai~~al~~l~~~---gd~Vi~~~~~y~~~~~~~~~~~~~~~g~ 168 (450)
.++|+.||+++ |. + .+++|+| +++++.+++.+++++ ||.|+++.|.|..+...+. ..|.
T Consensus 68 ~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G---~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~-----~~g~ 139 (396)
T PRK09147 68 PALREAIAAWLERRYGLPALDPATQVLPVNG---SREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAAL-----LAGA 139 (396)
T ss_pred HHHHHHHHHHHHHHhCCCcCCccceEEECCC---hHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHH-----hcCC
Confidence 44666666543 52 3 6889999 999999999999999 8999999999998887764 3677
Q ss_pred eEEEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc---
Q 013079 169 TTTFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP--- 235 (450)
Q Consensus 169 ~v~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~--- 235 (450)
++..++.+ |++++++.+ .++++++++++||||||.+.+ +++|+++|++++++||+||+|..+.++.
T Consensus 140 ~~~~vp~~~~~~~~~d~~~l~~~~-~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 218 (396)
T PRK09147 140 EPYFLNCDPANNFAPDFDAVPAEV-WARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAP 218 (396)
T ss_pred EEEEeccCccccCccCHHHHHHHH-hhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCC
Confidence 88877653 678888877 678999999999999999975 7788899999999999999996553221
Q ss_pred ----c---------CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcH
Q 013079 236 ----A---------RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHL 302 (450)
Q Consensus 236 ----~---------~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l 302 (450)
. ..+..+++.|+||.++++|+|+ ||+++++++++.+....... ....+.+.+.++...+...+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRi-G~~~~~~~l~~~~~~~~~~~-~~~~~~~~q~a~~~~~~~~~~~ 296 (396)
T PRK09147 219 PLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRS-GFVAGDAALLKKFLLYRTYH-GCAMPPAVQAASIAAWNDEAHV 296 (396)
T ss_pred CchhhhhccccCccccccEEEEeccccccCCcccee-eeecCCHHHHHHHHHHhhhc-ccCCCHHHHHHHHHHhcchhHH
Confidence 0 1235699999999999999999 99999999998887655411 1122333344433333333445
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHh
Q 013079 303 GLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYL 372 (450)
Q Consensus 303 ~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l 372 (450)
.+..+.++++++.+.+.|+++ ..+..| ..|.++|++++. ....|...+
T Consensus 297 ~~~~~~~~~~~~~~~~~L~~~-~~~~~p-------------------~~g~f~~~~~~~--~~~~~~~~l 344 (396)
T PRK09147 297 RENRALYREKFDAVTPILAPV-LDVQLP-------------------DAGFYLWAKVPG--DDTEFARRL 344 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCCCC-------------------CeeEEEEEECCC--CHHHHHHHH
Confidence 566667788888898988874 332223 257799999872 134555554
No 108
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.3e-26 Score=231.39 Aligned_cols=284 Identities=14% Similarity=0.114 Sum_probs=201.2
Q ss_pred hHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-
Q 013079 100 TVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS- 176 (450)
Q Consensus 100 ~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~- 176 (450)
....||+.||++++. +++++|+| +++++..++..++++||.|++..|+|+.+...+. ..|.++..++.+
T Consensus 68 ~~~~Lr~~ia~~~~~~~~~I~it~G---~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-----~~g~~~~~vp~~~ 139 (369)
T PRK08153 68 ENHDLRHALAAHHGVAPENIMVGEG---IDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVA-----GFGGRLVTVPYRD 139 (369)
T ss_pred ccHHHHHHHHHHhCCCHHHEEEcCC---HHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHH-----HcCCeEEEeeCCC
Confidence 367899999999985 46899999 9999999999989999999999999999887664 256677666543
Q ss_pred ---CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc--CCEEEEeCCCCCCCCCc--cC----CCCeEEEe
Q 013079 177 ---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSPLVLSP--AR----LGADVVVH 245 (450)
Q Consensus 177 ---d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~~~~~~--~~----~g~di~~~ 245 (450)
|++++.+.+.++++++|++++|+||||.+.+.+++.++++.. ++++|+||+|..+.... .. ....+++.
T Consensus 140 ~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~ 219 (369)
T PRK08153 140 DREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMR 219 (369)
T ss_pred CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEe
Confidence 678887766456899999999999999999988777777643 89999999995554321 11 13569999
Q ss_pred CCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC
Q 013079 246 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL 325 (450)
Q Consensus 246 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 325 (450)
|+||.+|.+|+|+ ||+++++++++.+...... ...+.+.+.++..++...+++....+.+.++++.+.+.|++.+.
T Consensus 220 SfSK~~g~~GlRi-G~~v~~~~~~~~l~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g~ 295 (369)
T PRK08153 220 TFSKAYGLAGARV-GYAIGAPGTIKAFDKVRNH---FGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANGL 295 (369)
T ss_pred cchHhccCcchhe-eeeecCHHHHHHHHHhhcC---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999 9999999999888766541 23334444444444443333444555667888889889987765
Q ss_pred eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCC
Q 013079 326 KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELN 404 (450)
Q Consensus 326 ~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~ 404 (450)
.+ .|. .|.++++.++ +...+..+++++... | +.+.. |...
T Consensus 296 ~~-~p~-------------------~~~f~~~~~~~~~~~a~~l~~~l~~~---G-i~v~~---------p~~~------ 336 (369)
T PRK08153 296 TP-LPS-------------------ATNFVAIDCGRDGAFARAVLDGLIAR---D-IFVRM---------PGVA------ 336 (369)
T ss_pred cc-CCC-------------------cCcEEEEECCCCcccHHHHHHHHHHC---C-eEEee---------CCCC------
Confidence 32 232 4568888875 233466777777642 3 33311 1100
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 405 AEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 405 ~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
..++++|||++..++.+.+++.|.+++..+
T Consensus 337 --------~~~~~iRis~~~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 337 --------PLDRCIRVSCGPDEELDLFAEALPEALEAA 366 (369)
T ss_pred --------CCCCeEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 014689999993345555555555555444
No 109
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.1e-26 Score=232.07 Aligned_cols=217 Identities=20% Similarity=0.255 Sum_probs=164.9
Q ss_pred hHHHHHHHHHHHh----C----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 100 TVLNLSRQMAALE----G----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 100 ~~~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
....||+.||+++ | .+++++|+| +++|+.+++.+++++||+|++++|+|..+...+. ..|.++.
T Consensus 69 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g---~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~-----~~g~~~~ 140 (393)
T PRK05764 69 GIPELREAIAAKLKRDNGLDYDPSQVIVTTG---AKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVK-----LAGGVPV 140 (393)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCHHHEEEeCC---cHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-----HcCCEEE
Confidence 4577888888876 2 256899999 9999999999999999999999999998877664 3677887
Q ss_pred EeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------
Q 013079 172 FVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ 235 (450)
Q Consensus 172 ~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------ 235 (450)
+++.+ |++++++++ ++++++|++++|+||||.+.+ +++|+++|+++|+++++|++|..+.++.
T Consensus 141 ~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 219 (393)
T PRK05764 141 FVPTGEENGFKLTVEQLEAAI-TPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSI 219 (393)
T ss_pred EEecCcccCCcCCHHHHHHhh-CccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccH
Confidence 77653 578999988 788999999999999999965 7899999999999999999985543211
Q ss_pred -----cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHc-cCCcHHHHHHHH
Q 013079 236 -----ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE-RIPHLGLRMKEH 309 (450)
Q Consensus 236 -----~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-~~~~l~~~~~~~ 309 (450)
...+.++++.|+||.++++|.|+ ||+++++++++.+....... ....+.+.+.++...+. ..+++....+++
T Consensus 220 ~~~~~~~~~~~i~~~s~SK~~~~~G~Ri-G~i~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 297 (393)
T PRK05764 220 ASLSPELRDRTITVNGFSKAYAMTGWRL-GYAAGPKELIKAMSKLQSHS-TSNPTSIAQYAAVAALNGPQDEVEEMRQAF 297 (393)
T ss_pred HHcCCCCcCCEEEEecCcccccCcccee-EEEecCHHHHHHHHHHHhhc-ccCCChHHHHHHHHHHcCChHHHHHHHHHH
Confidence 11247899999999999999998 99999999998887655411 11222333333333333 223344455567
Q ss_pred HHHHHHHHHHHHhC-CCee
Q 013079 310 CHRALIFARRMKKL-GLKV 327 (450)
Q Consensus 310 ~~~~~~l~~~L~~~-~~~v 327 (450)
.++++.+.+.|+++ +..+
T Consensus 298 ~~~~~~l~~~L~~~~g~~~ 316 (393)
T PRK05764 298 EERRDLMVDGLNEIPGLEC 316 (393)
T ss_pred HHHHHHHHHHHhhCCCCcc
Confidence 78888899999887 4444
No 110
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=3.3e-26 Score=230.33 Aligned_cols=231 Identities=21% Similarity=0.264 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHhC----C-----CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 101 VLNLSRQMAALEG----T-----EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 101 ~~~l~~~iA~l~g----~-----~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
..++++.+|++++ . +++++|+| +++|+++++..++.+||+|++++|.|.++...++ ..|.++.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G---~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~-----~~g~~~~ 140 (391)
T PRK07309 69 LLELRQAAADFVKEKYNLDYAPENEILVTIG---ATEALSASLTAILEPGDKVLLPAPAYPGYEPIVN-----LVGAEIV 140 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHH-----HcCCEEE
Confidence 4667777777653 1 46899999 9999999999999999999999999999887765 3577777
Q ss_pred EeCCC------CHHHHHHhhhc--CCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC------
Q 013079 172 FVDIS------DHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS------ 234 (450)
Q Consensus 172 ~v~~~------d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~------ 234 (450)
+++.+ |++++++++.. +++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.++
T Consensus 141 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~ 220 (391)
T PRK07309 141 EIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVS 220 (391)
T ss_pred EEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCC
Confidence 77642 78899888832 36899999999999999875 889999999999999999999655431
Q ss_pred ccC--CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCC-cHHHHHHHHHH
Q 013079 235 PAR--LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP-HLGLRMKEHCH 311 (450)
Q Consensus 235 ~~~--~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~-~l~~~~~~~~~ 311 (450)
... .+..+++.|+||.+|.+|+|+ ||+++++++++.+..... ......+.+.+.++..++.... +.....+++.+
T Consensus 221 ~~~~~~~~~i~~~S~SK~~g~~GlRv-G~~v~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 298 (391)
T PRK07309 221 IAEYLPDQTILINGLSKSHAMTGWRI-GLIFAPAEFTAQLIKSHQ-YLVTAATTMAQFAAVEALTNGKDDALPMKKEYIK 298 (391)
T ss_pred HHHhccCCEEEEecChhhccCcccee-EEEEeCHHHHHHHHHHHh-hcccCCChHHHHHHHHHHhCChhHHHHHHHHHHH
Confidence 111 145699999999999999998 999999999988876543 2112334444454544443322 23333455678
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 312 RALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 312 ~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+++.+.+.|++++..+..|. .|.++|+.++
T Consensus 299 ~~~~~~~~l~~~~~~~~~p~-------------------gg~~~~~~l~ 328 (391)
T PRK07309 299 RRDYIIEKMTDLGFKIIKPD-------------------GAFYIFAKIP 328 (391)
T ss_pred HHHHHHHHHHHCCCeecCCC-------------------eeEEEEEECC
Confidence 88889999988765544332 3556788877
No 111
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=4.3e-27 Score=233.31 Aligned_cols=281 Identities=16% Similarity=0.191 Sum_probs=202.6
Q ss_pred ccCCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCC-CEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 93 YSRHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 93 y~r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
..+|..+...++++.+|+.+|. +++++|+| +++++.+++.+++++| |+|+++.|+|..+...++ ..|.+
T Consensus 51 ~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~G---s~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~-----~~G~~ 122 (351)
T PRK01688 51 LNRYPECQPKAVIENYAAYAGVKPEQVLVSRG---ADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAE-----TIGVE 122 (351)
T ss_pred cccCCCCChHHHHHHHHHHhCCCHHHEEEcCC---HHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHH-----HcCCE
Confidence 4456677778999999999986 45899999 9999999999998887 899999999998877664 36778
Q ss_pred EEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc------c
Q 013079 170 TTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP------A 236 (450)
Q Consensus 170 v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~------~ 236 (450)
+..++.+ |++++++++ +++++|++++||||||.+.+.++|.++++. .++++|+||+|..+.... .
T Consensus 123 ~~~v~~~~~~~~d~~~l~~~~--~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~ 200 (351)
T PRK01688 123 IRTVPTLDNWQLDLPAIADNL--DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLA 200 (351)
T ss_pred EEEeecCCCCCCCHHHHHHhc--cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHh
Confidence 8777653 788898877 489999999999999999987777776653 268999999996654221 1
Q ss_pred CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc--CCcHHHHHHHHHHHHH
Q 013079 237 RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLGLRMKEHCHRAL 314 (450)
Q Consensus 237 ~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~~~~~~~~~~~~ 314 (450)
..+..+++.|+||.+|++|+|+ ||+++++++++.+...+.. ...+.+.+.++..++.. .+++..+.+.+.++++
T Consensus 201 ~~~n~iv~rSfSK~~glaGlRi-Gy~i~~~~~i~~l~~~~~~---~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~ 276 (351)
T PRK01688 201 EYPHLVILRTLSKAFALAGLRC-GFTLANEEVINLLLKVIAP---YPLSTPVADIAAQALSPQGIAAMRERVAEINANRQ 276 (351)
T ss_pred hCCCEEEEecchHhhcCHHHHH-hHHhCCHHHHHHHHhccCC---CCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 2357899999999999999999 9999999999888766542 22233334444444332 2345556667778889
Q ss_pred HHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccccccc
Q 013079 315 IFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMS 393 (450)
Q Consensus 315 ~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~ 393 (450)
++.+.|++++. ...+|. .++++++.+++ ...+.+.|... | +.+..++..
T Consensus 277 ~l~~~L~~~~~~~~~~ps-------------------~~nfi~~~~~~---~~~l~~~L~~~---g-i~vr~~~~~---- 326 (351)
T PRK01688 277 WLIAALKEIPCVEQVFDS-------------------ETNYILARFTA---SSAVFKSLWDQ---G-IILRDQNKQ---- 326 (351)
T ss_pred HHHHHHHhCCCCCeECCC-------------------CCcEEEEEcCC---HHHHHHHHHHC---C-eEEEECCCc----
Confidence 99999988743 333443 35688888863 34566666542 3 444432110
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013079 394 CSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 439 (450)
.|. ++++|||+| . .+..+.|.++|
T Consensus 327 -----------------~~~-~~~iRis~~-~---~~e~~~l~~al 350 (351)
T PRK01688 327 -----------------PGL-SNCLRITIG-T---REECQRVIDAL 350 (351)
T ss_pred -----------------CCC-CCeEEEeCC-C---HHHHHHHHHhh
Confidence 022 478999999 4 35556665554
No 112
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.7e-26 Score=230.30 Aligned_cols=288 Identities=17% Similarity=0.226 Sum_probs=199.7
Q ss_pred hHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC--
Q 013079 100 TVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI-- 175 (450)
Q Consensus 100 ~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~-- 175 (450)
...++|+.+|+++|. +++++|+| +++|+++++.+++.+||+|++++|.|..+...+. ..|.++.+++.
T Consensus 67 g~~~lr~~ia~~l~~~~~~v~~~~g---~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~-----~~g~~~~~v~~~~ 138 (380)
T PRK06225 67 GFPELRELILKDLGLDDDEALITAG---ATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFAS-----RFGAEVIEVPIYS 138 (380)
T ss_pred chHHHHHHHHHhcCCCCCcEEEeCC---HHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-----HhCceEEeecccc
Confidence 468899999999886 46899999 9999999999999999999999999998766554 25777777653
Q ss_pred ------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC--c-c--CCCCe
Q 013079 176 ------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS--P-A--RLGAD 241 (450)
Q Consensus 176 ------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~--~-~--~~g~d 241 (450)
.|++++++++ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+... + . ....+
T Consensus 139 ~~~~~~~d~~~l~~~~-~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 217 (380)
T PRK06225 139 EECNYKLTPELVKENM-DENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHT 217 (380)
T ss_pred ccCCccCCHHHHHhhc-CCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCE
Confidence 2788999988 788999999999999999865 889999999999999999998433211 1 1 12467
Q ss_pred EEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHH-HHHHHHHHHHHHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRM-KEHCHRALIFARRM 320 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~-~~~~~~~~~l~~~L 320 (450)
+++.|+||++|++|.|+ ||+++++++++.+...... ....+.+.+.++...+.......+++ +.+.++++.+.+.|
T Consensus 218 i~~~s~SK~~g~~G~Ri-G~i~~~~~l~~~~~~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 294 (380)
T PRK06225 218 VTSYSFSKIFGMAGLRI-GAVVATPDLIEVVKSIVIN--DLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAV 294 (380)
T ss_pred EEEeechhhcCCcccee-EEEecCHHHHHHHHHHHhc--ccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999998 9999999998887765421 12223333333333333322222333 33456677778888
Q ss_pred HhCC-Ceee-CCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhcccccccccccccccccccccccc
Q 013079 321 KKLG-LKVL-YPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGS 397 (450)
Q Consensus 321 ~~~~-~~v~-~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~ 397 (450)
++++ ..+. .| ..|+++++.++. ......|...|.. .| +.+..|..++.
T Consensus 295 ~~~~~~~~~~~~-------------------~~g~~~~~~~~~~~~~~~~l~~~l~~---~g-i~v~~g~~~~~------ 345 (380)
T PRK06225 295 DEIEGVFLPVYP-------------------SHGNMMVIDISEAGIDPEDLVEYLLE---RK-IFVRQGTYTSK------ 345 (380)
T ss_pred HhCcCCccccCC-------------------CCCeEEEEEcccccCCHHHHHHHHHH---CC-EEEcCCcccCc------
Confidence 7753 2221 22 246688888863 1235567777654 23 45554432110
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEeCCC--CCHHHHHHHHHHHHHHhh
Q 013079 398 STSSELNAEEKALAGISAGLVRMSVGYL--GTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 398 ~~~~~~~~~~~~~~g~~~~~iRiS~g~~--~~~~~~i~~l~~al~~~~ 443 (450)
...++.+|+|++ . ++.++.++.|.+++++++
T Consensus 346 --------------~~~~~~iR~s~~-~~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 346 --------------RFGDRYIRVSFS-IPREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred --------------CCCCceEEEEeC-CCHHHHHHHHHHHHHHHHHhh
Confidence 112468999999 6 345556666666666554
No 113
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.96 E-value=2.6e-26 Score=234.29 Aligned_cols=275 Identities=20% Similarity=0.213 Sum_probs=201.4
Q ss_pred CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC----CHHHHHHhhhcCC
Q 013079 114 TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS----DHEMVNSAIVQGR 189 (450)
Q Consensus 114 ~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~----d~~~l~~ai~~~~ 189 (450)
++++++|+| +++|+.++++.++++||.|++.+|+|++....++ ..|.++..|+.| |+++|++.++..+
T Consensus 155 ~~~IiiT~G---~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~-----~~g~~~~~vp~d~~G~~~e~le~~~~~~~ 226 (459)
T COG1167 155 PEQIVITSG---AQQALDLLLRLLLDPGDTVLVEDPTYPGALQALE-----ALGARVIPVPVDEDGIDPEALEEALAQWK 226 (459)
T ss_pred cCeEEEeCC---HHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHH-----HcCCcEEecCCCCCCCCHHHHHHHHhhcC
Confidence 367999999 9999999999999999999999999999999886 368888888776 8999999995557
Q ss_pred ceEEEEe-cCCCCcccccCH---HHHHHHHHhcCCEEEEeCCCCCCCCCccC---------CCCeEEEeCCCCccccCcc
Q 013079 190 TKVLYFE-SISNPTLAVANI---PELSRLAHDKGVTVVVDNTFSPLVLSPAR---------LGADVVVHSISKFISGGAD 256 (450)
Q Consensus 190 t~lv~i~-~~~NptG~v~~l---~~I~~la~~~gi~livD~~~~~~~~~~~~---------~g~di~~~S~sK~~g~~g~ 256 (450)
+|++|++ +.+||||.+.++ ++|.++|+++|+++|.|+.|+.+.++... .+.+++++||||.+. ||.
T Consensus 227 ~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-Pgl 305 (459)
T COG1167 227 PKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGL 305 (459)
T ss_pred CcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-ccc
Confidence 9998886 579999999874 49999999999999999999777654222 168999999999999 899
Q ss_pred ceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHc-c--CCcHHHHHHHHHHHHHHHHHHHHhCCC---eeeCC
Q 013079 257 IIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE-R--IPHLGLRMKEHCHRALIFARRMKKLGL---KVLYP 330 (450)
Q Consensus 257 ~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-~--~~~l~~~~~~~~~~~~~l~~~L~~~~~---~v~~p 330 (450)
|+ ||+++++++++.+..... .....++.+.+...+..+. + .+++....+.+.++++.+.+.|+++.. .+..|
T Consensus 306 Rl-G~vv~p~~~~~~~~~~k~-~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p 383 (459)
T COG1167 306 RL-GYVVAPPELIEKLLRLKQ-AADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRP 383 (459)
T ss_pred ce-eeeeCCHHHHHHHHHHHH-HhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecC
Confidence 99 999999999998877655 2224445555454444333 2 123344445578899999999998742 34444
Q ss_pred CCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccc-ccccccccccccccCCCCCHHHHH
Q 013079 331 GLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSL-GYYETLMSCSGSSTSSELNAEEKA 409 (450)
Q Consensus 331 ~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~-G~~~s~~~~~~~~~~~~~~~~~~~ 409 (450)
. .|.++|++++...+...++..+... | +.+.. |......
T Consensus 384 ~-------------------gG~flwl~l~~~~~~~~l~~~a~~~---g-v~i~~~g~~f~~~----------------- 423 (459)
T COG1167 384 E-------------------GGLFLWLELPEGIDARELLAAALEK---G-VVVTPLGSAFSAD----------------- 423 (459)
T ss_pred C-------------------ceEEEEEEcCCCCCHHHHHHHHHHC---C-CEEEcCCccccCC-----------------
Confidence 3 5789999999654456676666542 2 33333 4222110
Q ss_pred hcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 410 LAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 410 ~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
+-..+.+|||++ ..+.+++.+.+......+
T Consensus 424 --~~~~~~~Rl~~s-~~~~e~i~~gi~~l~~~~ 453 (459)
T COG1167 424 --GDPRNGLRLSFS-SPSEEEIEEGIKRLAALL 453 (459)
T ss_pred --CCCCCeEEEEcC-CCCHHHHHHHHHHHHHHH
Confidence 002468999999 766666555554443333
No 114
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-26 Score=231.50 Aligned_cols=244 Identities=18% Similarity=0.194 Sum_probs=177.1
Q ss_pred hhHHHHHHHHHHHhC--------C--CeEEEecChHHHHHHHHHHHHHhccCCC-EEEEeCCCchhHHHHHHHhCCCccC
Q 013079 99 PTVLNLSRQMAALEG--------T--EAAYCTASDKAGMSAISSVLMQLCSSGG-HVVAARTLYGGTHALLTHFFPRACN 167 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g--------~--~~~~~tsg~~~gt~ai~~al~~l~~~gd-~Vi~~~~~y~~~~~~~~~~~~~~~g 167 (450)
+...+||+.||++++ . +++++|+| +++++..++.+++.+|| +|+++.|+|..+...++ ..|
T Consensus 66 ~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~G---a~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~-----~~g 137 (374)
T PRK02610 66 GGHEALKQAIAEYVNESAAGSSQITPANISVGNG---SDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQ-----TLG 137 (374)
T ss_pred CchHHHHHHHHHHhCccccccCCCCHHHEEEcCC---hHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHH-----HcC
Confidence 456778899998876 2 45899999 99999988888777786 89999999999988775 367
Q ss_pred eeEEEeCCC------CHHHHHHhhhc---CCceEEEEecCCCCcccccCHHHHHHHHHh-cCCEEEEeCCCCCCCCCc--
Q 013079 168 ITTTFVDIS------DHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHD-KGVTVVVDNTFSPLVLSP-- 235 (450)
Q Consensus 168 ~~v~~v~~~------d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~l~~I~~la~~-~gi~livD~~~~~~~~~~-- 235 (450)
.++..++.+ |+++|++++.. .++++|++++||||||.+.+.+++.++++- +++++|+|++|..+....
T Consensus 138 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~ 217 (374)
T PRK02610 138 IPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLV 217 (374)
T ss_pred CEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchH
Confidence 788777643 78899888832 589999999999999999887766665532 489999999996653221
Q ss_pred ---cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHH
Q 013079 236 ---ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHR 312 (450)
Q Consensus 236 ---~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~ 312 (450)
......+++.|+||.+|++|+|+ ||+++++++++.+...+.. ...+.+.+.++..++...+...+.+++..+.
T Consensus 218 ~~~~~~~~~ivi~SfSK~~g~~GlRi-G~~v~~~~l~~~l~~~~~~---~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 293 (374)
T PRK02610 218 GELAQHPNWVILRTFSKAFRLAAHRV-GYAIGHPELIAVLEKVRLP---YNLPSFSQLAAQLALEHRQELLAAIPEILQE 293 (374)
T ss_pred HHHhcCCCEEEEEecchhccCcccce-eeeecCHHHHHHHHHhcCC---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 11134688999999999999999 9999999999888766531 2234455555555544333344445555555
Q ss_pred HHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 313 ALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 313 ~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
++.+.+.|++++. .+ .|. .|.++|+.++.......|.+.+..
T Consensus 294 r~~l~~~L~~~~~~~~-~p~-------------------~g~f~~~~l~~~~~~~~~~~~l~~ 336 (374)
T PRK02610 294 RDRLYQALQELPQLRV-WPS-------------------AANFLYLRLSQDAALAALHQALKA 336 (374)
T ss_pred HHHHHHHHHhCCCcEe-CCC-------------------cceEEEEeCCCCCCHHHHHHHHHH
Confidence 7778888877633 32 232 467899998743335667777654
No 115
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=8.4e-27 Score=231.90 Aligned_cols=278 Identities=17% Similarity=0.206 Sum_probs=202.1
Q ss_pred hhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 99 PTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
+...++|+.||++++. +.+++|+| +++++.+++..++++||+|+++.|.|..+...+. ..|.++..++.
T Consensus 63 ~~~~~lr~~ia~~~~~~~~~~I~~t~G---~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-----~~g~~~~~i~~ 134 (356)
T PRK04870 63 PRAAALKAALRAAMGVPAGADVLLGNG---SDELIQLLALACAKPGATVLAPEPGFVMYRMSAK-----LAGLEFVGVPL 134 (356)
T ss_pred CCHHHHHHHHHHHhCcCCCCcEEEcCC---HHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHH-----HcCCEEEEecC
Confidence 4468899999999985 36899999 9999999999889999999999999998877764 36888888765
Q ss_pred C-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc-----cCCCCeEEEe
Q 013079 176 S-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP-----ARLGADVVVH 245 (450)
Q Consensus 176 ~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~-----~~~g~di~~~ 245 (450)
+ |++++++++...++++|++++||||||.+.+.+++.++++..++++|+|++|..+.... ...+..+++.
T Consensus 135 ~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~ 214 (356)
T PRK04870 135 TADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMR 214 (356)
T ss_pred CCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEe
Confidence 3 78999998844589999999999999999998888888877688999999995554321 1224679999
Q ss_pred CCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC-
Q 013079 246 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG- 324 (450)
Q Consensus 246 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~- 324 (450)
|+|| ++.+|+|+ ||+++++++++.+...+.. ...+.+.+.++..++...+.+.+..+++.++++.+.+.|++++
T Consensus 215 S~SK-~~~~GlRi-G~~i~~~~~i~~~~~~~~~---~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 289 (356)
T PRK04870 215 TVSK-LGLAGLRL-GYLAGHPAWIAELDKVRPP---YNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPG 289 (356)
T ss_pred cchh-hhhHHHhh-hhhhCCHHHHHHHHHccCC---CcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999 89999999 9999999999888765531 1223344444444443333455566677888899999998763
Q ss_pred CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCC
Q 013079 325 LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELN 404 (450)
Q Consensus 325 ~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~ 404 (450)
..+ .|. .|+++++.+++ ...+...|... | +.+..|....
T Consensus 290 ~~~-~~~-------------------~~~~~~~~~~~---~~~~~~~l~~~---g-I~v~~~~~f~-------------- 328 (356)
T PRK04870 290 VTV-FPS-------------------AANFILVRVPD---AAAVFDGLKTR---G-VLVKNLSGMH-------------- 328 (356)
T ss_pred cEE-CCC-------------------CCeEEEEECCC---HHHHHHHHHHC---C-EEEEECCCCC--------------
Confidence 332 232 35689999873 34566666542 2 4554432210
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 405 AEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 405 ~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
+..+++||||++ . .+..+.|.++|.+
T Consensus 329 -------~~~~~~iRis~~-~---~~~~~~l~~al~~ 354 (356)
T PRK04870 329 -------PLLANCLRVTVG-T---PEENAQFLAALKA 354 (356)
T ss_pred -------CCCCCeEEEeCC-C---HHHHHHHHHHHHH
Confidence 012478999999 4 3445566666654
No 116
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=8.6e-27 Score=231.57 Aligned_cols=242 Identities=15% Similarity=0.152 Sum_probs=178.9
Q ss_pred ChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 98 NPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
.+...++|+.||++++. +++++|+| +++++.+++.+++++||+|++++|.|+.+...++ ..|.++..++.
T Consensus 59 ~~~~~~lr~aia~~~~~~~~~I~it~G---~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~-----~~g~~~~~v~~ 130 (353)
T PRK05387 59 DPNADALRQAIAAYYGLDPEQVFVGNG---SDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAG-----LYGIPYEEIPL 130 (353)
T ss_pred CCcHHHHHHHHHHHhCCCHHHEEEcCC---HHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHH-----HcCCEEEEeec
Confidence 33457899999999975 56899999 9999999999999999999999999988776654 35777777765
Q ss_pred C-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc-CCEEEEeCCCCCCCCCc-c----CCCCeEEE
Q 013079 176 S-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK-GVTVVVDNTFSPLVLSP-A----RLGADVVV 244 (450)
Q Consensus 176 ~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~-gi~livD~~~~~~~~~~-~----~~g~di~~ 244 (450)
+ |++++++ ++++|++++||||||.+.+.+++.++++.+ ++++|+|++|..+.... . ..+.++++
T Consensus 131 ~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~ 205 (353)
T PRK05387 131 DDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVV 205 (353)
T ss_pred CCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEE
Confidence 3 5565542 467899999999999999999999999875 99999999985553211 1 12568999
Q ss_pred eCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013079 245 HSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 245 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
+|+||.+|.+|+|+ ||+++++++++.+............+.+.+.++..++...+++.+..+++.++++.+.+.|++++
T Consensus 206 ~S~SK~~~~~GlR~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 284 (353)
T PRK05387 206 QTFSKSRSLAGLRV-GFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALG 284 (353)
T ss_pred EehhHhhcchhhhc-eeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999998 99999999998887665411111122333444434443333455556667888899999999887
Q ss_pred CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 325 LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 325 ~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
+.+ .|. .|+++++.+++. ....+.+.|..
T Consensus 285 ~~~-~~~-------------------~~~~~~~~~~~~-~~~~~~~~l~~ 313 (353)
T PRK05387 285 FEV-LPS-------------------KANFVFARHPSH-DAAELAAKLRE 313 (353)
T ss_pred CeE-CCC-------------------cCcEEEEECCCC-CHHHHHHHHHH
Confidence 654 232 355888888743 24567777754
No 117
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=2.1e-26 Score=232.89 Aligned_cols=231 Identities=15% Similarity=0.175 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 101 VLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 101 ~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
..++|+.||++++ .+++++|+| +++++.+++.+++.+||.|+++.|+|+.+...+. ..|.++..
T Consensus 76 ~~~lr~aia~~~~~~~g~~~~~~~I~it~G---~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~-----~~g~~~~~ 147 (409)
T PLN00143 76 ILPARRAIADYLSNDLPYQLSPDDVYLTLG---CKHAAEIIIKVLARPEANILLPRPGFPDVETYAI-----FHHLEIRH 147 (409)
T ss_pred CHHHHHHHHHHHHhhcCCCCCHhhEEEecC---hHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHH-----HcCCEEEE
Confidence 4557777777762 356899999 9999999999999999999999999999887764 35777776
Q ss_pred eCC-------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----c-
Q 013079 173 VDI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----A- 236 (450)
Q Consensus 173 v~~-------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~- 236 (450)
++. .|+++|++++ +++++++++++||||||.+.+ +++|+++|+++++++|+|++|..+.++. .
T Consensus 148 ~~~~~~~~~~~d~~~l~~~~-~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~ 226 (409)
T PLN00143 148 FDLLPEKGWEVDLDAVEAIA-DENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMG 226 (409)
T ss_pred EeccCCCCCcCCHHHHHHhc-ccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchh
Confidence 653 1789999888 778999999999999999987 7788899999999999999996654321 1
Q ss_pred CC---CCeEEEeCCCCccccCccceEEEEEc--CHHHH------HHHHHHhhhhhhccCCCchHHHHHHHHcc--CCcHH
Q 013079 237 RL---GADVVVHSISKFISGGADIIAGAVCG--PANLV------NSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLG 303 (450)
Q Consensus 237 ~~---g~di~~~S~sK~~g~~g~~igG~l~~--~~~~~------~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~ 303 (450)
.+ ...+++.|+||.|+++|+|+ ||+++ ++.++ +.+..... . ....+.+.+.++..++.. ..++.
T Consensus 227 ~~~~~~~vi~~~SfSK~f~~pGlRv-G~~v~~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~q~a~~~~l~~~~~~~~~ 303 (409)
T PLN00143 227 LFASIVPVITLGSISKRWMIPGWGL-GWLVTCDPSGLLQICEIADSIKKALN-P-APFPPTFIQAAIPEILEKTTEDFFS 303 (409)
T ss_pred hhcccCcEEEEccchhhcCCCccce-EEEEeeCchhhhhhHHHHHHHHHHHh-c-cCCCCchHHHHHHHHHhcChHHHHH
Confidence 11 35689999999999999999 99987 33333 22322221 0 112344555555444432 23566
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 304 LRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 304 ~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+..++++++++.+.+.|++++.... +. .| ..|.++|++++
T Consensus 304 ~~~~~~~~~~~~~~~~L~~~~~~~~-~~---~p-------------~gg~f~w~~l~ 343 (409)
T PLN00143 304 KTINILRAALAFCYDKLKEIPCIMC-PQ---KA-------------EGAFFALVKLN 343 (409)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCC-CC---CC-------------CeeEEEEEecc
Confidence 6667778888888888887643211 11 01 25778999986
No 118
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.96 E-value=2.6e-26 Score=238.81 Aligned_cols=217 Identities=15% Similarity=0.161 Sum_probs=157.9
Q ss_pred hHHHHHHHHHHHh------C--CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 100 TVLNLSRQMAALE------G--TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 100 ~~~~l~~~iA~l~------g--~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
....||+.||+++ + .+++++|+| +++++++++.+++++||+|+++.|.|+.+...+. ..|.++.
T Consensus 186 G~~~lReaia~~~~~~~~~~~~~~~I~it~G---~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~-----~~g~~~v 257 (517)
T PRK13355 186 GLFSARKAIMQYAQLKGLPNVDVDDIYTGNG---VSELINLSMSALLDDGDEVLIPSPDYPLWTACVN-----LAGGTAV 257 (517)
T ss_pred ChHHHHHHHHHHHHhcCCCCCChhHEEEeCc---HHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHH-----HCCCEEE
Confidence 3677888888887 3 356899999 9999999999999999999999999999987764 3577776
Q ss_pred EeCC-------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------
Q 013079 172 FVDI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ 235 (450)
Q Consensus 172 ~v~~-------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------ 235 (450)
.++. .|++++++++ ++++++|++++||||||.+.+ +++|+++|++|+++||+||+|..+.++.
T Consensus 258 ~~~~~~~~~~~~d~~~l~~~~-~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~ 336 (517)
T PRK13355 258 HYRCDEQSEWYPDIDDIRSKI-TSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSI 336 (517)
T ss_pred EeecCcccCCCCCHHHHHHhc-CcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccH
Confidence 6643 2789999988 889999999999999999987 8899999999999999999996654431
Q ss_pred cCC--C-CeEEEeCCCCccccCccceEEEEE--cCHHHH----HHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHH--
Q 013079 236 ARL--G-ADVVVHSISKFISGGADIIAGAVC--GPANLV----NSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGL-- 304 (450)
Q Consensus 236 ~~~--g-~di~~~S~sK~~g~~g~~igG~l~--~~~~~~----~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~-- 304 (450)
..+ + ..+++.|+||.++++|+|+ ||++ ++++++ +.+..... .....+.+.+.++..++........
T Consensus 337 ~~~~~~~~vi~~~S~SK~~~~~G~Ri-G~~i~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~a~~~aL~~~~~~~~~~ 413 (517)
T PRK13355 337 ASLAPDLFCVTFSGLSKSHMIAGYRI-GWMILSGNKRIAKDYIEGLNMLAN--MRLCSNVPAQSIVQTALGGHQSVKDYL 413 (517)
T ss_pred HHhCCCCeEEEEecchhhccCcccce-EEEEeeCchhhHHHHHHHHHHHhc--CcCCcChHHHHHHHHHhcCCccHHHHH
Confidence 112 1 2455699999999999999 9988 445443 33322221 1123344555555555543322222
Q ss_pred -HHHHHHHHHHHHHHHHHhC-CCeee
Q 013079 305 -RMKEHCHRALIFARRMKKL-GLKVL 328 (450)
Q Consensus 305 -~~~~~~~~~~~l~~~L~~~-~~~v~ 328 (450)
..+++.++++.+.+.|+++ +..+.
T Consensus 414 ~~~~~~~~~r~~l~~~L~~~~g~~~~ 439 (517)
T PRK13355 414 VPGGRVYEQRELVYNALNAIPGISAV 439 (517)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 2234556678899999876 33443
No 119
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=3.8e-26 Score=232.07 Aligned_cols=213 Identities=17% Similarity=0.197 Sum_probs=159.9
Q ss_pred hHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 100 TVLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 100 ~~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
...++|+.+|++++ .+++++|+| +++|+.+++..++++||+|++++|.|+.+..... ..|.++.
T Consensus 95 G~~~lr~aia~~~~~~~~~~~~~~~v~it~G---~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~-----~~g~~~~ 166 (430)
T PLN00145 95 GLLPARRAIAEYLSRDLPYELSTDDIYLTAG---CAQAIEIIMSVLAQPGANILLPRPGYPLYEARAV-----FSGLEVR 166 (430)
T ss_pred cCHHHHHHHHHHHhhccCCCCChhhEEEeCC---HHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH-----HcCCEEE
Confidence 45678888888864 356899999 9999999999999999999999999998876653 3577777
Q ss_pred EeCC-------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc---cC-
Q 013079 172 FVDI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---AR- 237 (450)
Q Consensus 172 ~v~~-------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---~~- 237 (450)
+++. .|++++++++ +++++++++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++. ..
T Consensus 167 ~~~~~~~~~~~~d~~~l~~~~-~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~ 245 (430)
T PLN00145 167 HFDLLPERGWEVDLEGVEALA-DENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPM 245 (430)
T ss_pred EeeCCcccCCcCCHHHHHHHh-CcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccch
Confidence 7653 1889999988 889999999999999999987 7788999999999999999996654321 11
Q ss_pred -----CCCeEEEeCCCCccccCccceEEEEEc--CHHHHHH------HHHHhhhhhhccCCCchHHHHHHHHcc--CCcH
Q 013079 238 -----LGADVVVHSISKFISGGADIIAGAVCG--PANLVNS------MMDLHQGALMLLGPTMNPKVAFELSER--IPHL 302 (450)
Q Consensus 238 -----~g~di~~~S~sK~~g~~g~~igG~l~~--~~~~~~~------l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l 302 (450)
....+++.|+||.|+++|+|+ ||++. ++.+++. +..... .....+++.+.++..++.. .+++
T Consensus 246 ~~~~~~~~vi~~~S~SK~~~~pG~Rl-G~iv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Q~a~~~~l~~~~~~~~ 322 (430)
T PLN00145 246 GVFGEVAPVLTLGSISKRWVVPGWRL-GWIATCDPNGILKETKVVDSIRNYLN--ISTDPATFVQGAIPQIIANTKEEFF 322 (430)
T ss_pred hhhcccCcEEEEeccccccCCCCeeE-EEEEEecchhhhhhhHHHHHHHHHhc--ccCCCCHHHHHHHHHHHhcCHHHHH
Confidence 136799999999999999999 99975 4444432 222221 0011233444444444433 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC
Q 013079 303 GLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 303 ~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
....++++++++.+.+.|++++
T Consensus 323 ~~~~~~~~~~~~~~~~~L~~~~ 344 (430)
T PLN00145 323 TKTLGLLKETADICYEKIKEIK 344 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC
Confidence 5666778888999999998763
No 120
>PLN02656 tyrosine transaminase
Probab=99.96 E-value=2.9e-26 Score=232.01 Aligned_cols=213 Identities=15% Similarity=0.157 Sum_probs=162.7
Q ss_pred hHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 100 TVLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 100 ~~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
...++|+.+|++++ .+++++|+| +++|+.+++.+++++||+|++++|.|+.+..... ..|+++.
T Consensus 74 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G---~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~ 145 (409)
T PLN02656 74 GLPQARRAIAEYLSRDLPYKLSLDDVFITSG---CTQAIDVALSMLARPGANILLPRPGFPIYELCAA-----FRHLEVR 145 (409)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcccEEEeCC---hHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHH-----HcCCEEE
Confidence 45667888888763 357899999 9999999999999999999999999998766553 2577777
Q ss_pred EeCCC-------CHHHHHHhhhcCCceEEEEecCCCCccccc---CHHHHHHHHHhcCCEEEEeCCCCCCCCCc---c--
Q 013079 172 FVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTFSPLVLSP---A-- 236 (450)
Q Consensus 172 ~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~~~~~~~~---~-- 236 (450)
.++.+ |++++++++ ++++++|++++||||||.+. ++++|+++|+++|+++|+|++|..+.++. .
T Consensus 146 ~i~~~~~~~~~~d~~~l~~~~-~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 224 (409)
T PLN02656 146 YVDLLPEKGWEVDLDAVEALA-DQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPM 224 (409)
T ss_pred EEeCCCcCCCCCCHHHHHHHh-ccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccH
Confidence 77642 788999888 78899999999999999995 58899999999999999999996654321 1
Q ss_pred ----CCCCeEEEeCCCCccccCccceEEEEEcC--------HHHHHHHHHHhhhhhhccCCCchHHHHHHHHccC--CcH
Q 013079 237 ----RLGADVVVHSISKFISGGADIIAGAVCGP--------ANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI--PHL 302 (450)
Q Consensus 237 ----~~g~di~~~S~sK~~g~~g~~igG~l~~~--------~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~--~~l 302 (450)
.....+++.|+||.|+.+|+|+ ||++++ +++++.+...... ....+.+.+.++..++... .++
T Consensus 225 ~~~~~~~~vi~~~SfSK~f~~pGlRi-G~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~q~a~~~~l~~~~~~~~ 301 (409)
T PLN02656 225 GVFGSIVPVLTLGSLSKRWIVPGWRL-GWFVTTDPSGSFRDPKIVERIKKYFDI--LGGPATFIQAAVPTILEQTDESFF 301 (409)
T ss_pred HHhcccCcEEEEcccchhccCcceeE-EEEEEeCcccccccHHHHHHHHHHHhh--hcCCCHHHHHHHHHHHhcCcHHHH
Confidence 1135789999999999999999 999873 4677777655431 1122344555555554421 345
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC
Q 013079 303 GLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 303 ~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
....++++++++.+.+.|++++
T Consensus 302 ~~~~~~~~~~r~~~~~~L~~~~ 323 (409)
T PLN02656 302 KKTINILKQSSDICCDRIKEIP 323 (409)
T ss_pred HHHHHHHHHHHHHHHHHHhhCC
Confidence 5566677888899999998764
No 121
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=1e-26 Score=232.96 Aligned_cols=328 Identities=17% Similarity=0.216 Sum_probs=219.5
Q ss_pred HHHHHhhcCCCCCCCC-CccccCCCChhHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCC
Q 013079 74 ETMRRMFAGELGPDRD-FFIYSRHFNPTVLNLSRQMAALEGTE---AAYCTASDKAGMSAISSVLMQLCSSGGHVVAART 149 (450)
Q Consensus 74 ~~~~~~~~~~~~n~~~-~~~y~r~~~~~~~~l~~~iA~l~g~~---~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~ 149 (450)
+++.+.++...+|+.. .|.......+..+++++.+++++|.+ .+++|+| +++++++++.+++++||+|+++.+
T Consensus 18 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g---~t~al~~~~~~~~~~gd~vl~~~~ 94 (376)
T TIGR01977 18 EAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNN---ATTALNIALKGLLKEGDHVITTPM 94 (376)
T ss_pred HHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCC---HHHHHHHHHHhccCCCCEEEECcc
Confidence 5666666543334321 11111112367889999999999964 5799999 999999999998899999999999
Q ss_pred CchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 150 LYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 150 ~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
+|+++...+...... .|.++..++.+ |++++++++ ++++++|++++++||||.+.|+++|.++|+++|+++|+
T Consensus 95 ~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~d~~~l~~~~-~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~liv 172 (376)
T TIGR01977 95 EHNSVARPLECLKEQ-IGVEITIVKCDNEGLISPERIKRAI-KTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFIL 172 (376)
T ss_pred hhhHHHHHHHHHHHH-cCcEEEEEecCCCCCcCHHHHHHhc-CCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEE
Confidence 999887665443333 58888887654 799999999 78899999999999999999999999999999999999
Q ss_pred eCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh----hhh--------hhccCCCchHH
Q 013079 225 DNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH----QGA--------LMLLGPTMNPK 290 (450)
Q Consensus 225 D~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~----~~~--------~~~~g~~~~~~ 290 (450)
|+++ +....+....++|+++.|+||++++|.. .|++++.+...+.++.... ... .....+++...
T Consensus 173 D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~ 251 (376)
T TIGR01977 173 DAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQG-TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTP 251 (376)
T ss_pred EhhhccCccCCCchhcCCCEEEecccccccCCCC-ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHH
Confidence 9998 4444555567899999999999875543 4344455543222211100 000 00011122221
Q ss_pred HHHHHHccCCc-----HHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHH
Q 013079 291 VAFELSERIPH-----LGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEK 364 (450)
Q Consensus 291 ~a~~~~~~~~~-----l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~ 364 (450)
....+...++. .....++..++++++.+.|++.+. .+..|.-+ . ..+++++|.+++..
T Consensus 252 ~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~---~------------~~~~~v~~~~~~~~- 315 (376)
T TIGR01977 252 GIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADP---A------------NRVGVVSFTVEGID- 315 (376)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCc---c------------ccCCeEEEEECCCC-
Confidence 11111112222 233445667888888899887653 55443211 1 13568999987543
Q ss_pred HHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcC-CCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 365 ANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAG-ISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 365 ~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g-~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
...+.+.|... +| +.++.|..|+....+. +| ...+.||||++ ..+++++++.+.++|+.
T Consensus 316 ~~~~~~~L~~~--~g-i~v~~g~~~~~~~~~~--------------~g~~~~~~iRis~~-~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 316 SEEVADILDEK--FD-IATRTGLHCAPLAHKT--------------IGTFATGTIRLSLG-YFNTEEEIEKLLEALSE 375 (376)
T ss_pred HHHHHHHHhcc--CC-EEEEcccccchHHHHH--------------hCCCCCCeEEEecC-CCCCHHHHHHHHHHHhh
Confidence 55677777642 24 6777776665432211 22 23578999999 99999999999998875
No 122
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.96 E-value=4.5e-26 Score=228.91 Aligned_cols=282 Identities=15% Similarity=0.207 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHh----C----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 101 VLNLSRQMAALE----G----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
...+|+.||+++ | .+++++|+| +++|+.+++.+++++||+|++++|.|..+...+. ..|.++..
T Consensus 68 ~~~lr~~ia~~~~~~~~~~~~~~~i~it~G---~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-----~~g~~~~~ 139 (384)
T PRK06348 68 DVELIEEIIKYYSKNYDLSFKRNEIMATVG---ACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIE-----MVGGKPII 139 (384)
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCC---hHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHH-----HcCCEEEE
Confidence 345777777765 2 467899999 9999999999999999999999999999988875 24666666
Q ss_pred eCC-------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC----c-cC
Q 013079 173 VDI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS----P-AR 237 (450)
Q Consensus 173 v~~-------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~----~-~~ 237 (450)
++. .|++++++++ ++++++|++++||||||.+.+ +++|.++|+++++++|+|++|..+.++ + ..
T Consensus 140 ~~~~~~~~~~~d~~~l~~~~-~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 218 (384)
T PRK06348 140 LETYEEDGFQINVKKLEALI-TSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMAT 218 (384)
T ss_pred ecCCcCcCCcCCHHHHHHhh-CcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhh
Confidence 543 2789999988 778999999999999999976 778889999999999999999665432 1 11
Q ss_pred ----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCC-cHHHHHHHHHHH
Q 013079 238 ----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP-HLGLRMKEHCHR 312 (450)
Q Consensus 238 ----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~-~l~~~~~~~~~~ 312 (450)
.+..+++.|+||.++++|+|+ ||+++++++++.+....... ....+.+.+.++..++...+ ++....+.++++
T Consensus 219 ~~~~~~~vi~~~SfSK~~~l~GlRi-G~~v~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 296 (384)
T PRK06348 219 LAGMPERTITFGSFSKDFAMTGWRI-GYVIAPDYIIETAKIINEGI-CFSAPTISQRAAIYALKHRDTIVPLIKEEFQKR 296 (384)
T ss_pred cCCCcCcEEEEecchhccCCccccc-eeeecCHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 246799999999999999998 99999999988887665421 13344555555554444332 244445556788
Q ss_pred HHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhccccccccccccccccc
Q 013079 313 ALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGFMAVSLGYYET 390 (450)
Q Consensus 313 ~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~~~~~l~~~~~~g~i~vs~G~~~s 390 (450)
++.+.+.|++++. .+..|. .|.++|++++. ......|...+.. +.| +.+..|+...
T Consensus 297 ~~~~~~~L~~~~~~~~~~p~-------------------gg~~~~~~~~~~~~~~~~l~~~l~~--~~g-v~v~pg~~f~ 354 (384)
T PRK06348 297 LEYAYKRIESIPNLSLHPPK-------------------GSIYAFINIKKTGLSSVEFCEKLLK--EAH-VLVIPGKAFG 354 (384)
T ss_pred HHHHHHHHhcCCCceeccCC-------------------eeEEEEEecccCCCCHHHHHHHHHH--hCC-EEEcCchhhc
Confidence 8889999987632 333222 45578888862 2124556655432 123 4555443320
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 391 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
...++.||||++ . +.+ .+.++++.+
T Consensus 355 ---------------------~~~~~~iRi~~~-~-~~~----~l~~al~~l 379 (384)
T PRK06348 355 ---------------------ESGEGYIRLACT-V-GIE----VLEEAFNRI 379 (384)
T ss_pred ---------------------cCCCCeEEEEec-C-CHH----HHHHHHHHH
Confidence 011478999999 6 333 344444444
No 123
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.96 E-value=4e-26 Score=235.44 Aligned_cols=290 Identities=16% Similarity=0.127 Sum_probs=198.2
Q ss_pred hHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhc-cCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 100 TVLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLC-SSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 100 ~~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
...+||+.||++++ .+++++|+| +++|+.+++++++ ++||.|+++.|.|+.+...+. ..|.++
T Consensus 116 G~~~LR~aia~~~~~~~g~~~~~~~I~it~G---a~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~-----~~g~~~ 187 (481)
T PTZ00377 116 GYPFVRKAVAAFIERRDGVPKDPSDIFLTDG---ASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAIT-----LLGGKQ 187 (481)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcCC---HHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHH-----HcCCEE
Confidence 35567777777753 357899999 9999999999998 799999999999999988875 356666
Q ss_pred EEeCCC-------CHHHHHHhhhcC------CceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC
Q 013079 171 TFVDIS-------DHEMVNSAIVQG------RTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS 234 (450)
Q Consensus 171 ~~v~~~-------d~~~l~~ai~~~------~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~ 234 (450)
..++.+ |+++|++++ ++ ++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++
T Consensus 188 v~v~~~~~~~~~~d~~~l~~~l-~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~ 266 (481)
T PTZ00377 188 VPYYLDEEKGWSLDQEELEEAY-EQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYD 266 (481)
T ss_pred EEEEeccccCCCCCHHHHHHHH-HHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccC
Confidence 666532 679999888 43 7999999999999999987 889999999999999999999665431
Q ss_pred ---cc--------CCC-------CeEEEeCCCCc-cccCccceEEEEEc---CHHHHHHHHHHhhhhhhccCCCchHHHH
Q 013079 235 ---PA--------RLG-------ADVVVHSISKF-ISGGADIIAGAVCG---PANLVNSMMDLHQGALMLLGPTMNPKVA 292 (450)
Q Consensus 235 ---~~--------~~g-------~di~~~S~sK~-~g~~g~~igG~l~~---~~~~~~~l~~~~~~~~~~~g~~~~~~~a 292 (450)
+. .+. ..++++|+||. ++++|+|+ ||++. ++++++.+..... . ....+.+.+.++
T Consensus 267 ~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRi-G~~~~~~~p~~li~~l~~~~~-~-~~~~~~~~Q~a~ 343 (481)
T PTZ00377 267 GEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRG-GYFELTNIPPEVREQIYKLAS-I-NLCSNVVGQLMT 343 (481)
T ss_pred CCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCce-EEEEEeCCCHHHHHHHHHHhh-e-ecCCChHHHHHH
Confidence 10 111 35788999997 68899998 99875 8889988877654 1 123455566666
Q ss_pred HHHHccC----Cc---HH----HHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 293 FELSERI----PH---LG----LRMKEHCHRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 293 ~~~~~~~----~~---l~----~~~~~~~~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
..++... .. .. ...++++++++.+.+.|+++ +..+..|. .|.++|++++
T Consensus 344 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~-------------------gg~fl~~~~~ 404 (481)
T PTZ00377 344 GLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVE-------------------GAMYAFPRIE 404 (481)
T ss_pred HHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCC-------------------eeEEEEeecc
Confidence 5555321 11 11 12223578888899999887 33544332 4557776653
Q ss_pred --CHH----------HHHHH-HHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCC-
Q 013079 361 --TEE----------KANRL-MNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLG- 426 (450)
Q Consensus 361 --~~~----------~~~~~-~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~- 426 (450)
... ....+ ...+.. .| +++..|+.... .-.++++|||++ ..
T Consensus 405 l~~~~~~~~~~~~~~~~~~~~~~ll~~---~g-V~v~pG~~F~~--------------------~~~~~~~Rls~~-~~~ 459 (481)
T PTZ00377 405 LPEKAIQEAKERGLAPDVLYCLELLES---TG-IVVVPGSGFGQ--------------------KPGTYHFRITIL-PPE 459 (481)
T ss_pred CchhhHHHHHhcCCCcHHHHHHHHHHH---cC-EEEeCCcccCC--------------------CCCCCEEEEEEC-CCH
Confidence 110 01122 233332 23 45555543210 001468999999 63
Q ss_pred -CHHHHHHHHHHHHHHhhhc
Q 013079 427 -TLDQRWSQFEKALSRMQDS 445 (450)
Q Consensus 427 -~~~~~i~~l~~al~~~~~~ 445 (450)
+.++.++.|.+.+.+..++
T Consensus 460 e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 460 EQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 4566677777777766544
No 124
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.96 E-value=1.8e-26 Score=228.66 Aligned_cols=277 Identities=18% Similarity=0.231 Sum_probs=203.5
Q ss_pred ChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 98 NPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
.+...++|+.+|++++. +++++|+| ++++++.++.+++++||+|++++|+|+.+...+. ..|.++..++.
T Consensus 53 ~~~~~~lr~~ia~~~~~~~~~i~~~~G---~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~-----~~g~~~~~~~~ 124 (346)
T TIGR01141 53 DPDPAELKQALADYYGVDPEQILLGNG---SDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAK-----IHGAEVVKVPL 124 (346)
T ss_pred CCCHHHHHHHHHHHhCcChHHEEEcCC---HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHH-----HcCCeEEEecc
Confidence 34458899999999985 56899999 9999999999988999999999999987765553 26788888765
Q ss_pred C-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc--CCEEEEeCCCCCCCCC--cc----CCCCeE
Q 013079 176 S-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSPLVLS--PA----RLGADV 242 (450)
Q Consensus 176 ~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~~~~~--~~----~~g~di 242 (450)
+ |++++++++ .+++++|++++|+||||.+.+++++.++|+.+ ++++|+|++|..+... +. ..+.++
T Consensus 125 ~~~~~~d~~~l~~~~-~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 125 DEDGQLDLEDILVAI-DDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCCCCCHHHHHHhc-CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEE
Confidence 3 889999987 78899999999999999999999999999877 9999999998644332 11 124568
Q ss_pred EEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013079 243 VVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 243 ~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
++.|+||++|++|.|+ ||++.++++++.+...... ...+.+++.++...+....++....+++.++++.+.+.|++
T Consensus 204 ~~~S~sK~~g~~G~r~-G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 279 (346)
T TIGR01141 204 VLRTLSKAFGLAGLRI-GYAIANAEIIDALNKVRAP---FNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKK 279 (346)
T ss_pred EEehhhHhhhchhhhc-eeeecCHHHHHHHHhccCC---CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999899998 9999999988888765431 22234444444444433333555566678888999999988
Q ss_pred C-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCC
Q 013079 323 L-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSS 401 (450)
Q Consensus 323 ~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~ 401 (450)
+ +..+ .|. .|+++++.++. ..+++.+.|... | +.+..|....
T Consensus 280 ~~g~~~-~~~-------------------~g~~~~~~~~~--~~~~~~~~L~~~---g-I~v~~g~~f~----------- 322 (346)
T TIGR01141 280 LPGLEV-YPS-------------------DANFVLIRFPR--DADALFEALLEK---G-IIVRDLNSYP----------- 322 (346)
T ss_pred cCCCEE-CCC-------------------cCCEEEEecCC--CHHHHHHHHHHC---C-eEEEeCCCcC-----------
Confidence 7 4343 222 35689999875 356677777652 3 5555553210
Q ss_pred CCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013079 402 ELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 402 ~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 439 (450)
+. ++.+|||++ . ++.++.+.++|
T Consensus 323 ----------~~-~~~iRls~~-~---~~~i~~~~~~l 345 (346)
T TIGR01141 323 ----------GL-PNCLRITVG-T---REENDRFLAAL 345 (346)
T ss_pred ----------CC-CCeEEEecC-C---HHHHHHHHHHh
Confidence 11 578999999 3 34456665554
No 125
>PRK07337 aminotransferase; Validated
Probab=99.95 E-value=8e-26 Score=227.46 Aligned_cols=284 Identities=20% Similarity=0.256 Sum_probs=199.1
Q ss_pred hHHHHHHHHHHHh----C----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 100 TVLNLSRQMAALE----G----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 100 ~~~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
...++++.+|+++ | .+++++|+| +++|+.+++..++++||+|++++|+|+++...+. ..|.++.
T Consensus 68 g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G---~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~ 139 (388)
T PRK07337 68 GLAPLREAIAAWYARRFGLDVAPERIVVTAG---ASAALLLACLALVERGDEVLMPDPSYPCNRHFVA-----AAEGRPV 139 (388)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChHhEEEecC---cHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHH-----HcCCEEE
Confidence 3567888888875 3 356899999 9999999999999999999999999999887764 2466666
Q ss_pred EeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----c
Q 013079 172 FVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----A 236 (450)
Q Consensus 172 ~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~ 236 (450)
.++.+ |++++++.+ ++++++|++++|+||||.+.+ +++|+++|+++++++|+|++|..+.++. .
T Consensus 140 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 218 (388)
T PRK07337 140 LVPSGPAERFQLTAADVEAAW-GERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSAL 218 (388)
T ss_pred EeecCCccCCcCCHHHHHhhc-CccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChh
Confidence 66542 688999988 788999999999999999976 6788999999999999999986554321 1
Q ss_pred CCC-CeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc--CCcHHHHHHHHHHHH
Q 013079 237 RLG-ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLGLRMKEHCHRA 313 (450)
Q Consensus 237 ~~g-~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~~~~~~~~~~~ 313 (450)
.++ ..+++.|+||.+|++|+|+ ||++.++++++.+....... ....+.+.+.++..++.. ...+.+..+++++++
T Consensus 219 ~~~~~vi~~~S~SK~~~~~G~Ri-G~~~~~~~l~~~l~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r 296 (388)
T PRK07337 219 SLGDDVITINSFSKYFNMTGWRL-GWLVVPEALVGTFEKLAQNL-FICASALAQHAALACFEPDTLAIYERRRAEFKRRR 296 (388)
T ss_pred hccCCEEEEEechhhcCCchhhe-eeeecCHHHHHHHHHHHHHh-ccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHH
Confidence 222 3467899999999999998 99999999988887665421 123344455554444432 233444455678888
Q ss_pred HHHHHHHHhCCCee-eCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-----HHHHHHHHHh-hccccccccccccc
Q 013079 314 LIFARRMKKLGLKV-LYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-----EKANRLMNYL-QNYAQFGFMAVSLG 386 (450)
Q Consensus 314 ~~l~~~L~~~~~~v-~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-----~~~~~~~~~l-~~~~~~g~i~vs~G 386 (450)
+.+.+.|++++..+ ..|. .|.++|++++.. .....|...+ .. .| +.+..|
T Consensus 297 ~~~~~~L~~~~~~~~~~p~-------------------~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~---~g-v~v~pg 353 (388)
T PRK07337 297 DFIVPALESLGFKVPVMPD-------------------GAFYVYADCRGVAHPAAGDSAALTQAMLHD---AG-VVLVPG 353 (388)
T ss_pred HHHHHHHHhcCCccccCCC-------------------eeEEEEEecccccCCCCCCHHHHHHHHHHh---CC-EEEeCc
Confidence 99999998876533 2332 467899998631 1244565553 32 22 455555
Q ss_pred cccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 387 YYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 387 ~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
+.+.. .-.++++|||++ . +. +.|.++++++.
T Consensus 354 ~~f~~--------------------~~~~~~~Ri~~~-~-~~----~~l~~~l~rl~ 384 (388)
T PRK07337 354 RDFGP--------------------HAPRDYIRLSYA-T-SM----SRLEEAVARLG 384 (388)
T ss_pred hhhCC--------------------CCCCCEEEEEec-C-CH----HHHHHHHHHHH
Confidence 33210 001479999999 6 33 34445555443
No 126
>PRK09148 aminotransferase; Validated
Probab=99.95 E-value=7.8e-26 Score=228.59 Aligned_cols=232 Identities=15% Similarity=0.123 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 101 VLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
..++|+.+|+++ | .+ ++++|+| +++++.+++..++++||+|++++|+|+.+...+. ..|.++.
T Consensus 70 ~~~lr~aia~~~~~~~g~~~~~~~~I~it~G---~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~-----~~g~~v~ 141 (405)
T PRK09148 70 IPGLRRAQAAYYARRFGVKLNPDTQVVATLG---SKEGFANMAQAITAPGDVILCPNPSYPIHAFGFI-----MAGGVIR 141 (405)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEcCC---hHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHH-----hcCCEEE
Confidence 345667777665 3 34 6899999 9999999999999999999999999999877664 3688887
Q ss_pred EeCCC----CHHHHHHhhh--cCCceEEEEecCCCCcccccCH---HHHHHHHHhcCCEEEEeCCCCCCCCC------cc
Q 013079 172 FVDIS----DHEMVNSAIV--QGRTKVLYFESISNPTLAVANI---PELSRLAHDKGVTVVVDNTFSPLVLS------PA 236 (450)
Q Consensus 172 ~v~~~----d~~~l~~ai~--~~~t~lv~i~~~~NptG~v~~l---~~I~~la~~~gi~livD~~~~~~~~~------~~ 236 (450)
.++.+ +++++++++. .+++++|++++||||||.+.+. ++|+++|+++|+++|+|++|..+.++ ..
T Consensus 142 ~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~ 221 (405)
T PRK09148 142 SVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVL 221 (405)
T ss_pred EEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChh
Confidence 77653 2334444441 3688999999999999999875 68889999999999999999554321 11
Q ss_pred CC----CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccC-CcHHHHHHHHHH
Q 013079 237 RL----GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCH 311 (450)
Q Consensus 237 ~~----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~ 311 (450)
.+ +..++++|+||.+|.+|+|+ ||+++++++++.+...+.. .....+.+.+.++..++... .++....+.+++
T Consensus 222 ~~~~~~~~~i~~~SfSK~~~~pGlR~-G~~v~~~~~i~~l~~~~~~-~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~ 299 (405)
T PRK09148 222 QVPGAKDVTVEFTSMSKTFSMAGWRM-GFAVGNERLIAALTRVKSY-LDYGAFTPIQVAATAALNGPQDCIAEMRELYKK 299 (405)
T ss_pred hCCCccCcEEEEeccccccCCcchhe-eeeeCCHHHHHHHHHHHHH-hccCCChHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 11 34578999999999999999 9999999999988766541 11233445555555555432 345555566788
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013079 312 RALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 361 (450)
Q Consensus 312 ~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 361 (450)
+++.+.+.|++++..+..|. .|.++|+.++.
T Consensus 300 ~r~~l~~~L~~~~~~~~~p~-------------------~g~f~~~~l~~ 330 (405)
T PRK09148 300 RRDVLVESFGRAGWDIPPPA-------------------ASMFAWAPIPE 330 (405)
T ss_pred HHHHHHHHHHHcCCccCCCC-------------------eeEEEEEECCC
Confidence 89999999988765433332 46689999873
No 127
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.6e-26 Score=230.91 Aligned_cols=219 Identities=16% Similarity=0.163 Sum_probs=168.0
Q ss_pred ChhHHHHHHHHHHHh----C----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 98 NPTVLNLSRQMAALE----G----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
.+....||+.||+++ | .+++++|+| +++++.+++.+++++||.|+++.|.|+.+...+. ..|.+
T Consensus 64 ~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G---~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~-----~~g~~ 135 (368)
T PRK03317 64 DRDAVALRADLAAYLTAQTGVGLTVENVWAANG---SNEILQQLLQAFGGPGRTALGFVPSYSMHPIIAR-----GTHTE 135 (368)
T ss_pred CCchHHHHHHHHHHhhhhccCCCChhhEEECCC---HHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHH-----hcCCe
Confidence 345677888888887 3 356899999 9999999999999999999999999999887764 25666
Q ss_pred EEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc----cC---
Q 013079 170 TTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP----AR--- 237 (450)
Q Consensus 170 v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~----~~--- 237 (450)
+..++.+ |++++++++...++++|++++|+||||.+.+.+++.++++..++++|+||+|..+.... ..
T Consensus 136 ~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~ 215 (368)
T PRK03317 136 WVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLP 215 (368)
T ss_pred eEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHH
Confidence 6655432 78999998844578999999999999999999999999999899999999996653221 11
Q ss_pred -CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHH
Q 013079 238 -LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIF 316 (450)
Q Consensus 238 -~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l 316 (450)
.+..+++.|+||.+|.+|+|+ ||+++++++++.+...+. ....+.+.+.++..++...+.+.+..+++.++++.+
T Consensus 216 ~~~~~i~~~SfSK~~g~~GlRi-G~~~~~~~~~~~l~~~~~---~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 291 (368)
T PRK03317 216 EYPRLVVSRTMSKAFAFAGGRL-GYLAAAPAVVDALRLVRL---PYHLSAVTQAAARAALRHADELLASVAALRAERDRV 291 (368)
T ss_pred hCCCEEEEEechhhhccchhhh-hhhhCCHHHHHHHHhcCC---CCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 134688999999999999999 999999999988875543 123344444444444433334445556677888889
Q ss_pred HHHHHhCCCeee
Q 013079 317 ARRMKKLGLKVL 328 (450)
Q Consensus 317 ~~~L~~~~~~v~ 328 (450)
.+.|++++..+.
T Consensus 292 ~~~L~~~g~~~~ 303 (368)
T PRK03317 292 VAWLRELGLRVA 303 (368)
T ss_pred HHHHHHCCCEeC
Confidence 999988776543
No 128
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.95 E-value=4.7e-26 Score=224.00 Aligned_cols=269 Identities=18% Similarity=0.175 Sum_probs=193.2
Q ss_pred HHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHH
Q 013079 102 LNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMV 181 (450)
Q Consensus 102 ~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l 181 (450)
..|++.||+.++.+++++|+| +++++.+++. +.+||+|++++|+|+.+...++ ..|.++..++.+ ++
T Consensus 52 ~~Lr~~ia~~~~~~~I~it~G---s~~al~~~~~--~~~gd~v~v~~P~y~~~~~~~~-----~~g~~~~~v~~~---~~ 118 (330)
T PRK05664 52 DGLEAAARAYYGAPQLLPVAG---SQAAIQALPR--LRAPGRVGVLSPCYAEHAHAWR-----RAGHQVRELDEA---EV 118 (330)
T ss_pred HHHHHHHHHHhCCCCEEECcC---HHHHHHHHHH--ccCCCEEEEcCCChHHHHHHHH-----HcCCeEEEechh---hH
Confidence 689999999999999999999 9999998753 5789999999999999988875 468888888753 45
Q ss_pred HHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCC--CccC---CCCeEEEeCCCCcccc
Q 013079 182 NSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVL--SPAR---LGADVVVHSISKFISG 253 (450)
Q Consensus 182 ~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~--~~~~---~g~di~~~S~sK~~g~ 253 (450)
++++ + +++++++++||||||.+.+ +++|+++|+++|+++|+||+|..+.. +... .+..++++|+||.+|.
T Consensus 119 ~~~~-~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl 196 (330)
T PRK05664 119 EAAL-D-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGL 196 (330)
T ss_pred hhhh-c-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccC
Confidence 5656 3 6788999999999999987 55666677889999999999944421 1112 2356999999999999
Q ss_pred CccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCC
Q 013079 254 GADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLE 333 (450)
Q Consensus 254 ~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~ 333 (450)
+|+|+ ||+++++++++.+...... ...+.+.+.++..++..........+++.++++.+.+.|++++.. |.
T Consensus 197 ~GlRi-G~~v~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~---~~-- 267 (330)
T PRK05664 197 AGARL-GFVLAEPALLRALAELLGP---WTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHGLT---PA-- 267 (330)
T ss_pred CCcce-EEEEeCHHHHHHHHHhcCC---CCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCCCc---cc--
Confidence 99999 9999999999888766441 122334444444444443444445566788899999999887532 11
Q ss_pred CCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCC
Q 013079 334 DHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGI 413 (450)
Q Consensus 334 ~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~ 413 (450)
.|.+.++++.+++ ...+.+.|... | +.+.. + +
T Consensus 268 ---------------~~~~~f~~~~~~~---~~~~~~~l~~~---g-i~v~~---f----------------------~- 299 (330)
T PRK05664 268 ---------------GGCALFQWVRTED---AAALHEFLARR---G-ILTRL---F----------------------E- 299 (330)
T ss_pred ---------------CCcceEEEEecCC---HHHHHHHHHHC---C-eEEEE---C----------------------C-
Confidence 0233567777653 35566666542 2 33321 0 0
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Q 013079 414 SAGLVRMSVGYLGTLDQRWSQFEKALSRMQDS 445 (450)
Q Consensus 414 ~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~ 445 (450)
..+.||||+| . +.+..+.|.++|+.+.++
T Consensus 300 ~~~~iRis~~-~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 300 QPASLRFGLP-A--DEADWARLDQALLAYRKE 328 (330)
T ss_pred CCCeEEEECC-C--CHHHHHHHHHHHHHHHhh
Confidence 1368999999 5 345577777887777543
No 129
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=1.2e-25 Score=212.58 Aligned_cols=296 Identities=19% Similarity=0.180 Sum_probs=211.5
Q ss_pred CCccccCCCChhHHHHHHHHHHHhC----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCC
Q 013079 89 DFFIYSRHFNPTVLNLSRQMAALEG----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPR 164 (450)
Q Consensus 89 ~~~~y~r~~~~~~~~l~~~iA~l~g----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~ 164 (450)
+.|.|+.......+.+.....+..+ .+.++|+++ ..-++.++++++.++||.|++..|.|+++......
T Consensus 54 GvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~---VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~---- 126 (388)
T COG1168 54 GVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPG---VVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKL---- 126 (388)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCc---chHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhh----
Confidence 4456774445577888888888766 356899999 99999999999999999999999999999988862
Q ss_pred ccCeeEEEeCCC--------CHHHHHHhhhcCCceEEEEecCCCCccccc---CHHHHHHHHHhcCCEEEEeCCCCCCCC
Q 013079 165 ACNITTTFVDIS--------DHEMVNSAIVQGRTKVLYFESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTFSPLVL 233 (450)
Q Consensus 165 ~~g~~v~~v~~~--------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~~~~~~ 233 (450)
.|-++...|.. |.++|++++.+++++++++|+||||||++. .+.+|.++|++||+.+|+||++.++.+
T Consensus 127 -n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~ 205 (388)
T COG1168 127 -NGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVL 205 (388)
T ss_pred -cCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccc
Confidence 45555554432 999999999667789999999999999995 588999999999999999999866654
Q ss_pred Cc------cCC-----CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccC-CCchHHHHHHHHc-cCC
Q 013079 234 SP------ARL-----GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLG-PTMNPKVAFELSE-RIP 300 (450)
Q Consensus 234 ~~------~~~-----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g-~~~~~~~a~~~~~-~~~ 300 (450)
.. ..+ ...+.+.|.||.|+.+|+.++-+++.++++..+......... ..+ +.++..+...+.+ +..
T Consensus 206 ~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~-~~~~n~lg~~A~~aAY~~G~~ 284 (388)
T COG1168 206 GGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNG-LHGPSALGIIATEAAYNQGEP 284 (388)
T ss_pred cCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhc-CCCCchHHHHHHHHHHHhchH
Confidence 32 111 356889999999999999874444566666555433322111 233 3333333333333 556
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhC-C-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC----CHHHHH-HHHHHhh
Q 013079 301 HLGLRMKEHCHRALIFARRMKKL-G-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME----TEEKAN-RLMNYLQ 373 (450)
Q Consensus 301 ~l~~~~~~~~~~~~~l~~~L~~~-~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~----~~~~~~-~~~~~l~ 373 (450)
++.+..+.++.|++++.+.|.++ | .++..|. ...++|+++. +.+... .+++..+
T Consensus 285 WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~-------------------gTYL~WLD~r~l~l~d~~l~~~ll~~ak 345 (388)
T COG1168 285 WLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQ-------------------GTYLAWLDCRELGLDDSELAEFLLEEAK 345 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCC-------------------CceeeeeeccccCCChHHHHHHHHHhhc
Confidence 78877778899999999999886 3 3776664 4568999987 222233 3344433
Q ss_pred ccccccccccccccccccccccccccCCCCCHHHHHhcCC-CCCeEEEEeCCC--CCHHHHHHHHHHHHHHh
Q 013079 374 NYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGI-SAGLVRMSVGYL--GTLDQRWSQFEKALSRM 442 (450)
Q Consensus 374 ~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~-~~~~iRiS~g~~--~~~~~~i~~l~~al~~~ 442 (450)
++++.|... |. ..+++|+.++ . ...++.++.|.++|+.+
T Consensus 346 -------Val~~G~~F----------------------G~~g~gf~RlN~a-cpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 346 -------VALSPGSTF----------------------GEEGSGFVRLNFA-CPRAILEEALERLKRALKKR 387 (388)
T ss_pred -------EeccCCCcc----------------------CcCCCceEEEecC-CCHHHHHHHHHHHHHHHhcc
Confidence 577777432 22 2589999999 5 45666666776666543
No 130
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.95 E-value=6.1e-26 Score=229.29 Aligned_cols=214 Identities=17% Similarity=0.164 Sum_probs=160.3
Q ss_pred hhHHHHHHHHHHHhCC----CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 99 PTVLNLSRQMAALEGT----EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~----~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
..++.+.+.+++..|. +++++|+| +++|++.++.+++.+||+|++++|.|..+...+.. .+..+..++
T Consensus 74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G---~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~-----~~~~~~~v~ 145 (402)
T PRK06107 74 ALRKAIIAKLERRNGLHYADNEITVGGG---AKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLA-----NDGTPVIVA 145 (402)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCC---HHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHH-----cCCEEEEec
Confidence 4455666666665553 56899999 99999999998899999999999999888766531 333444443
Q ss_pred C-------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhc-CCEEEEeCCCCCCCCCc------cC
Q 013079 175 I-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDK-GVTVVVDNTFSPLVLSP------AR 237 (450)
Q Consensus 175 ~-------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~-gi~livD~~~~~~~~~~------~~ 237 (450)
. .|++++++++ .+++++|++++|+||||.+.+ +++|+++|+++ ++++|+|++|..+.++. ..
T Consensus 146 ~~~~~~~~~~~~~l~~~~-~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~ 224 (402)
T PRK06107 146 CPEEQGFKLTPEALEAAI-TPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLA 224 (402)
T ss_pred CCcccCCCCCHHHHHhhc-CcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHH
Confidence 2 2678999988 778999999999999999976 56778889998 99999999996553321 11
Q ss_pred -----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHc-cCCcHHHHHHHHHH
Q 013079 238 -----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE-RIPHLGLRMKEHCH 311 (450)
Q Consensus 238 -----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-~~~~l~~~~~~~~~ 311 (450)
.+..++++|+||.++.+|+|+ ||+++++++++.+...... .....+.+.+.++..++. ...++....+.+.+
T Consensus 225 ~~~~~~~~vi~~~S~SK~~~~pGlRi-G~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 302 (402)
T PRK06107 225 AAPELRDRVLVTNGVSKTYAMTGWRI-GYAAGPADLIAAINKLQSQ-SSSCPSSISQAAAAAALNGDQSFVTESVAVYKQ 302 (402)
T ss_pred hCcCccCCEEEEeccchhhcCcccce-eeeecCHHHHHHHHHHHHh-cccCCChHHHHHHHHHhcCChHHHHHHHHHHHH
Confidence 135799999999999999999 9999999999888776541 113344455555554543 23445556666788
Q ss_pred HHHHHHHHHHhC
Q 013079 312 RALIFARRMKKL 323 (450)
Q Consensus 312 ~~~~l~~~L~~~ 323 (450)
+++.+.+.|+++
T Consensus 303 ~~~~~~~~L~~~ 314 (402)
T PRK06107 303 RRDYALALLNAI 314 (402)
T ss_pred HHHHHHHHHhcC
Confidence 899999999876
No 131
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=5.9e-26 Score=228.79 Aligned_cols=252 Identities=18% Similarity=0.192 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHh----C------CC-eEEEecChHHHHHHHHHHHHHhccCCCE--EEEeCCCchhHHHHHHHhCCCccC
Q 013079 101 VLNLSRQMAALE----G------TE-AAYCTASDKAGMSAISSVLMQLCSSGGH--VVAARTLYGGTHALLTHFFPRACN 167 (450)
Q Consensus 101 ~~~l~~~iA~l~----g------~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~--Vi~~~~~y~~~~~~~~~~~~~~~g 167 (450)
..++|+.+|+++ | .+ .+++|+| +++++.+++..++++||+ |+++.|.|..+...+. ..|
T Consensus 66 ~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~G---a~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~-----~~g 137 (393)
T TIGR03538 66 LPELRQAIARWLERRFDLPTGVDPERHVLPVNG---TREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAAL-----LAG 137 (393)
T ss_pred CHHHHHHHHHHHHHhhCCcccCCCCceEEECCC---cHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHH-----hcC
Confidence 456777777765 2 33 5789999 999999999999999986 8999999999887664 367
Q ss_pred eeEEEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC---
Q 013079 168 ITTTFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS--- 234 (450)
Q Consensus 168 ~~v~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~--- 234 (450)
.++..++.+ |++++++++ .+++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++
T Consensus 138 ~~~~~v~~~~~~~~~~d~~~l~~~~-~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (393)
T TIGR03538 138 AEPYFLNCTAENGFLPDFDAVPESV-WRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGN 216 (393)
T ss_pred CeEEEeeccccCCCCCCHHHHHHHH-hhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCC
Confidence 777777642 678898888 668999999999999999987 788999999999999999999555332
Q ss_pred -cc------------CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCc
Q 013079 235 -PA------------RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPH 301 (450)
Q Consensus 235 -~~------------~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~ 301 (450)
+. .....+++.|+||.++++|+|+ ||+++++++++.+...... .....+.+.+.++...+...++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRv-G~~i~~~~l~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~ 294 (393)
T TIGR03538 217 PPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRS-GFVAGDAEILKAFLRYRTY-HGCAMPIPTQLASIAAWNDEQH 294 (393)
T ss_pred CCcCHHHhcccccccccccEEEEecchhhcCCcccce-EEEecCHHHHHHHHHHHHh-hccCcCHHHHHHHHHHhcChHH
Confidence 10 1234699999999999999999 9999999998888765541 1112233344444333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccc
Q 013079 302 LGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFM 381 (450)
Q Consensus 302 l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i 381 (450)
+....+.++++++.+.+.|+++ ..+..| ..|.++|+.++. ....|.+.+.. +.| +
T Consensus 295 ~~~~~~~~~~~~~~~~~~L~~~-~~~~~p-------------------~gg~f~~~~~~~--~~~~~~~~l~~--~~g-V 349 (393)
T TIGR03538 295 VRENRALYREKFAAVLEILGQV-LDLELP-------------------DAGFYLWPKVPG--DDEAFARALYE--EEN-V 349 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-CcccCC-------------------CeeEEEEEECCC--CHHHHHHHHHH--HCC-E
Confidence 5555666788888898988764 222223 257799999971 13456666532 123 5
Q ss_pred ccccccc
Q 013079 382 AVSLGYY 388 (450)
Q Consensus 382 ~vs~G~~ 388 (450)
.+..|+.
T Consensus 350 ~v~pg~~ 356 (393)
T TIGR03538 350 TVLPGRF 356 (393)
T ss_pred EEeCCcc
Confidence 6665643
No 132
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.5e-26 Score=227.87 Aligned_cols=275 Identities=17% Similarity=0.186 Sum_probs=196.1
Q ss_pred HHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC---
Q 013079 102 LNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--- 176 (450)
Q Consensus 102 ~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~--- 176 (450)
..+++.||++++. +++++|+| +++++++++.+++++||+|+++.|+|+.+...+. ..|.++..++.+
T Consensus 74 ~~lr~~ia~~~~~~~~~i~~t~G---~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~-----~~g~~~~~v~~~~~~ 145 (371)
T PRK05166 74 RALREAIAARTGVPADRIILGNG---SEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPT-----MMGARVERVTVTPDL 145 (371)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCC---HHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHH-----HcCCeEEEeecCCCC
Confidence 4899999999986 46899999 9999999999999999999999999998877664 368888877654
Q ss_pred --CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCC-----cc----CC-CCeE
Q 013079 177 --DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLS-----PA----RL-GADV 242 (450)
Q Consensus 177 --d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~-----~~----~~-g~di 242 (450)
|++++++++ ++++++|++++||||||.+.+.+++.++++. .++++|+|++|..+... .. .. ...+
T Consensus 146 ~~~~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi 224 (371)
T PRK05166 146 GFDLDALCAAV-ARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWI 224 (371)
T ss_pred CCCHHHHHHhh-hcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEE
Confidence 789999988 7789999999999999999987777666653 48899999998544321 11 11 2568
Q ss_pred EEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH
Q 013079 243 VVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMK 321 (450)
Q Consensus 243 ~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~ 321 (450)
++.|+||.+|.+|+|+ ||++. ++++.+.+...+.. ...+.+.+.++..++...+++....+.+.++++.+.+.|+
T Consensus 225 ~i~SfSK~~~l~GlRi-G~~i~~~~~l~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 300 (371)
T PRK05166 225 VLRTFSKAYGLAGLRV-GYGLVSDPELVGLLDRVRTP---FNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELA 300 (371)
T ss_pred EEeechHhhhcchhhe-eeeecCCHHHHHHHHHhccC---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 99764 77888877655431 2223334434444443334555556677888899999999
Q ss_pred hCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCC
Q 013079 322 KLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSS 401 (450)
Q Consensus 322 ~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~ 401 (450)
+++..+ .|. .|.++|+.++.. ...|.+.+... | +.+..|.. +
T Consensus 301 ~~g~~~-~p~-------------------~g~fl~~~~~~~--~~~l~~~l~~~---g-i~v~p~~~------~------ 342 (371)
T PRK05166 301 EMGYRI-APS-------------------RANFLFFDARRP--ASAVAEALLRQ---G-VIVKPWKQ------P------ 342 (371)
T ss_pred HCcCee-CCC-------------------cCCEEEEeCCCC--HHHHHHHHHHC---C-eEEecCCC------C------
Confidence 876543 232 356888887632 34566666542 3 44444421 0
Q ss_pred CCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 402 ELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 402 ~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
+ .+++||||++ .. +..+.|.++|+.+
T Consensus 343 ----------~-~~~~iRi~~~-~~---~~~~~l~~~l~~i 368 (371)
T PRK05166 343 ----------G-FETFIRVSIG-SP---EENDHFVAALDKV 368 (371)
T ss_pred ----------C-CCCeEEEEcC-CH---HHHHHHHHHHHHH
Confidence 1 1478999999 52 2244555555544
No 133
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.95 E-value=8.8e-26 Score=228.18 Aligned_cols=270 Identities=15% Similarity=0.164 Sum_probs=190.0
Q ss_pred ChhHHHHHHHHHHHhCC--------CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 98 NPTVLNLSRQMAALEGT--------EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~--------~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
......+|+.+|++++. +++++|+| +++|+.+++.+++.+||+|++++|+|..+...+. ..|.+
T Consensus 72 ~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G---~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~ 143 (403)
T TIGR01265 72 SVGALAAREAVAEYLSSDLPGKLTADDVVLTSG---CSQAIEICIEALANPGANILVPRPGFPLYDTRAA-----FSGLE 143 (403)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecC---hHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHH-----HcCCE
Confidence 34467788999988863 46899999 9999999999999999999999999998876654 25777
Q ss_pred EEEeCC-------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc----
Q 013079 170 TTFVDI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP---- 235 (450)
Q Consensus 170 v~~v~~-------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~---- 235 (450)
+..++. .|++++++++ ++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.++.
T Consensus 144 ~~~~~~~~~~~~~~d~~~l~~~~-~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 222 (403)
T TIGR01265 144 VRLYDLLPEKDWEIDLDGLEALA-DEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFI 222 (403)
T ss_pred EEEecCCcccCCccCHHHHHHHh-CcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCcc
Confidence 777653 2789999988 788999999999999999976 8899999999999999999996664321
Q ss_pred --cCC---CCeEEEeCCCCccccCccceEEEEEcC--HH-----HHHHHHHHhhhhhhccCCCchHHHHHHHHcc--CCc
Q 013079 236 --ARL---GADVVVHSISKFISGGADIIAGAVCGP--AN-----LVNSMMDLHQGALMLLGPTMNPKVAFELSER--IPH 301 (450)
Q Consensus 236 --~~~---g~di~~~S~sK~~g~~g~~igG~l~~~--~~-----~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~ 301 (450)
..+ ...++++|+||.++.+|.|+ ||++.+ ++ +++.+...... ....+.+.+.++..++.. ..+
T Consensus 223 ~~~~~~~~~~vi~~~S~SK~~~~pGlRi-G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~ 299 (403)
T TIGR01265 223 PMASFASIVPVLSLGGISKRWVVPGWRL-GWIIIHDPHGIFRDTVLQGLKNLLQR--ILGPATIVQGALPDILENTPQEF 299 (403)
T ss_pred chhhhccCCcEEEEeecccccCCCcceE-EEEEEeCchhhhHHHHHHHHHHHhhh--hcCCChHHHHHHHHHHHhChHHH
Confidence 111 24689999999999999999 998763 23 33333333220 122333444444444432 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-----HHHHHHHHHh-hc
Q 013079 302 LGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-----EKANRLMNYL-QN 374 (450)
Q Consensus 302 l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-----~~~~~~~~~l-~~ 374 (450)
+.+..+++.++++.+.+.|+.++ ..+..|. .|.++|++++.. .....+...+ +.
T Consensus 300 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~-------------------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 360 (403)
T TIGR01265 300 FDGKISVLKSNAELCYEELKDIPGLVCPKPE-------------------GAMYLMVKLELELFPEIKDDVDFCEKLVRE 360 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceecCCC-------------------ceeEEEEeccccccCCCCCHHHHHHHHHHh
Confidence 55566677888899999998763 3433332 577899998632 1244565554 33
Q ss_pred cccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCC
Q 013079 375 YAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLG 426 (450)
Q Consensus 375 ~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~ 426 (450)
.| +.+..|+.+ + .+++||||++ ..
T Consensus 361 ---~g-v~v~pg~~f----------------------~-~~~~iRis~~-~~ 384 (403)
T TIGR01265 361 ---ES-VICLPGSAF----------------------G-LPNWVRITIT-VP 384 (403)
T ss_pred ---CC-EEEeCcccc----------------------C-CCCeEEEEec-CC
Confidence 22 455544321 1 1478999999 63
No 134
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=2e-26 Score=229.72 Aligned_cols=278 Identities=16% Similarity=0.203 Sum_probs=194.8
Q ss_pred hhHHHHHHHHHHHhCC--CeEEE-ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 99 PTVLNLSRQMAALEGT--EAAYC-TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~--~~~~~-tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
+...++++.+|++++. +.+++ |+| +++++++++..++++||+|+++.|.|+.+...++ ..|.++..++.
T Consensus 69 ~~~~~lr~~ia~~~~~~~~~i~~~~~G---a~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-----~~g~~~~~~~~ 140 (361)
T PRK00950 69 PDAPELREALSKYTGVPVENIIVGGDG---MDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAK-----AHGAKPVYAKR 140 (361)
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEeCCC---HHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHH-----HcCCEEEEeec
Confidence 3458899999999986 45777 677 8889999998888999999999999998776654 26778877753
Q ss_pred C-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCC-Ccc----CCCCeEEEe
Q 013079 176 S-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL-SPA----RLGADVVVH 245 (450)
Q Consensus 176 ~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~-~~~----~~g~di~~~ 245 (450)
+ |++++++++ ++++++|++++|+||||.+.+++++.++|+++|+++|+|++|..+.. +.. ..+..++++
T Consensus 141 ~~~~~~~~~~l~~~~-~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~ 219 (361)
T PRK00950 141 EEDFSLDVDSVLNAI-TEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGR 219 (361)
T ss_pred CCCCCcCHHHHHHHh-ccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEE
Confidence 2 788999988 77899999999999999999999999999999999999999955431 111 224568899
Q ss_pred CCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCC
Q 013079 246 SISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGL 325 (450)
Q Consensus 246 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 325 (450)
|+||.+|++|+|+ ||+++++++++.+...... ...+.+.+..+..++...+++.+..++++++++.+.+.|+ .
T Consensus 220 S~SK~~g~~GlRi-G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~---~ 292 (361)
T PRK00950 220 TFSKVFGLAGLRI-GYGFVPEWLIDYYMRAKTP---FSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP---F 292 (361)
T ss_pred eehHhhcCchhhc-chhcCCHHHHHHHHHhcCC---CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC---e
Confidence 9999999999998 9999999998888765541 2223333434433443333344444455666666666654 2
Q ss_pred eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCH
Q 013079 326 KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNA 405 (450)
Q Consensus 326 ~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~ 405 (450)
.+ .|. .|+++++.++.. ....|.+.|... | +.+..|...
T Consensus 293 ~~-~~~-------------------~~~~i~~~~~~~-~~~~~~~~l~~~---g-v~v~~~~~f---------------- 331 (361)
T PRK00950 293 KV-YPS-------------------EANFVLVDVTPM-TAKEFCEELLKR---G-VIVRDCTSF---------------- 331 (361)
T ss_pred eE-CCC-------------------cceEEEEECCCC-CHHHHHHHHHHC---C-EEEeeCCcc----------------
Confidence 22 221 356888888532 356677776542 3 444443210
Q ss_pred HHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 406 EEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 406 ~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.+..+++||||++ . .+.++.+.++|+++
T Consensus 332 -----~~~~~~~lRis~~-~---~~~~~~l~~~L~~i 359 (361)
T PRK00950 332 -----RGLGDYYIRVSIG-T---FEENERFLEILKEI 359 (361)
T ss_pred -----CCCCCCeEEEECC-C---HHHHHHHHHHHHHH
Confidence 0112578999999 3 22455555555543
No 135
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=3.1e-25 Score=224.16 Aligned_cols=242 Identities=12% Similarity=0.092 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 101 VLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
...+|+.+|+++ | .+ ++++|+| +++|+.+++.+++++||.|++++|+|+.+...+. ..|.++.
T Consensus 73 ~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G---~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~ 144 (403)
T PRK08636 73 IYKLRLAICNWYKRKYNVDLDPETEVVATMG---SKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFI-----LAGGNVH 144 (403)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCeEEECCC---hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----hcCCEEE
Confidence 345666666654 4 34 6899999 9999999999999999999999999999988775 3577777
Q ss_pred EeCCC-------CHH----HHHHhhh--cCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc
Q 013079 172 FVDIS-------DHE----MVNSAIV--QGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP 235 (450)
Q Consensus 172 ~v~~~-------d~~----~l~~ai~--~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~ 235 (450)
.++.+ |++ .+++++. ..+++++++++||||||.+.+ +++|+++|+++++++|+|++|..+.++.
T Consensus 145 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~ 224 (403)
T PRK08636 145 KMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDG 224 (403)
T ss_pred EEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCC
Confidence 66531 444 4455552 257899999999999999976 6788899999999999999996554321
Q ss_pred ------cCC----CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccC-CcHHH
Q 013079 236 ------ARL----GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGL 304 (450)
Q Consensus 236 ------~~~----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~ 304 (450)
..+ +..++++|+||.+|.+|+|+ ||+++++++++.+....... ....+++.+..+..++... +++.+
T Consensus 225 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRi-G~iv~~~~li~~~~~~~~~~-~~~~~~~~q~~~~~~~~~~~~~~~~ 302 (403)
T PRK08636 225 YKTPSILEVEGAKDVAVESYTLSKSYNMAGWRV-GFVVGNKKLVGALKKIKSWL-DYGMFTPIQVAATIALDGDQSCVEE 302 (403)
T ss_pred CCCCChhcCCCccccEEEEEecccccCCcccee-eeeeCCHHHHHHHHHHHHHh-cccCChHHHHHHHHHHhCcHHHHHH
Confidence 111 24567899999999999998 99999999998887654411 1223344454444444322 33444
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH---HHHHHHHHH
Q 013079 305 RMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE---EKANRLMNY 371 (450)
Q Consensus 305 ~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~---~~~~~~~~~ 371 (450)
..+.+.++++.+.+.|++.+..+..|. .|.++|+.++.. .....|...
T Consensus 303 ~~~~~~~~~~~l~~~L~~~~~~~~~p~-------------------~g~~~~~~l~~~~~~~~~~~l~~~ 353 (403)
T PRK08636 303 IRETYRKRRDVLIESFANAGWELQKPR-------------------ASMFVWAKIPEPARHLGSLEFSKQ 353 (403)
T ss_pred HHHHHHHHHHHHHHHHHHCCCcccCCC-------------------cceEEEEECCCccCCCCHHHHHHH
Confidence 555678888999999988765443332 577899999732 113456554
No 136
>PRK09265 aminotransferase AlaT; Validated
Probab=99.95 E-value=2e-25 Score=225.67 Aligned_cols=283 Identities=13% Similarity=0.095 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHh------C--CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 101 VLNLSRQMAALE------G--TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 101 ~~~l~~~iA~l~------g--~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
...|++.+|+++ + .+++++|+| +++++.+++..++++||+|++++|+|..+...+. ..|..+..
T Consensus 74 ~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G---~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~v~ 145 (404)
T PRK09265 74 LFSARKAIMQYYQQKGIPDVDVDDIYIGNG---VSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVS-----LSGGKPVH 145 (404)
T ss_pred cHHHHHHHHHHHhccCCCCCCcccEEEeCC---hHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHH-----HcCCEEEE
Confidence 457888888876 3 356899999 9999999999999999999999999998887764 24555554
Q ss_pred eCC-------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------c
Q 013079 173 VDI-------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------A 236 (450)
Q Consensus 173 v~~-------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------~ 236 (450)
++. .|++++++++ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.++. .
T Consensus 146 ~~~~~~~~~~~d~~~l~~~~-~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 224 (404)
T PRK09265 146 YLCDEEAGWFPDLDDIRSKI-TPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIA 224 (404)
T ss_pred EecccccCCCCCHHHHHHhc-cccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHH
Confidence 432 2688999988 778999999999999999988 8899999999999999999986553321 1
Q ss_pred CC---CCeEEEeCCCCccccCccceEEEEEc--CHHH----HHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHH--
Q 013079 237 RL---GADVVVHSISKFISGGADIIAGAVCG--PANL----VNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLR-- 305 (450)
Q Consensus 237 ~~---g~di~~~S~sK~~g~~g~~igG~l~~--~~~~----~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~-- 305 (450)
.+ ...+++.|+||.++++|+|+ ||++. ++.+ ++.+..... .....+.+.+.++..++...+.....
T Consensus 225 ~~~~~~~vi~~~S~SK~~~~pGlRi-G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 301 (404)
T PRK09265 225 SLAPDLLCVTFNGLSKAYRVAGFRV-GWMVLSGPKKHAKGYIEGLDMLAS--MRLCANVPAQHAIQTALGGYQSINELIL 301 (404)
T ss_pred HcCCCceEEEEecchhhccCcccce-EEEEEeCchHHHHHHHHHHHHHhc--cccCCCcHHHHHHHHHhcCchhHHHHHH
Confidence 11 13578899999999999999 99874 4443 333322111 11233445555555555433333222
Q ss_pred -HHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-----HHHHHHHHHhhccccc
Q 013079 306 -MKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-----EKANRLMNYLQNYAQF 378 (450)
Q Consensus 306 -~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-----~~~~~~~~~l~~~~~~ 378 (450)
.+++.++++.+.+.|++++ ..+..| ..|.++|+.++.. ...+.+.+.+.. .
T Consensus 302 ~~~~~~~~r~~~~~~L~~~~~~~~~~p-------------------~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~---~ 359 (404)
T PRK09265 302 PGGRLYEQRDRAWELLNAIPGVSCVKP-------------------KGALYAFPKLDPKVYPIHDDEQFVLDLLLQ---E 359 (404)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcccCC-------------------CcceEEEEEecccccCCCCHHHHHHHHHHh---C
Confidence 2356677888888898763 233333 2567889888632 123344454543 2
Q ss_pred cccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC--CCHHHHHHHHHHHHH
Q 013079 379 GFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL--GTLDQRWSQFEKALS 440 (450)
Q Consensus 379 g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~--~~~~~~i~~l~~al~ 440 (450)
| +.+..|+.+. ...++++||+++ . +..++.++.|.+++.
T Consensus 360 g-v~v~pg~~F~---------------------~~~~~~~Ri~~~-~~~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 360 K-VLLVQGTGFN---------------------WPEPDHFRIVTL-PRVDDLEEAIGRIGRFLS 400 (404)
T ss_pred C-EEEECchhhC---------------------CCCCCeEEEEeC-CCHHHHHHHHHHHHHHHH
Confidence 3 4544443210 012478999998 5 234444555555444
No 137
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-25 Score=226.83 Aligned_cols=241 Identities=20% Similarity=0.272 Sum_probs=176.7
Q ss_pred hHHHHHHHHHHHh-------CCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 100 TVLNLSRQMAALE-------GTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 100 ~~~~l~~~iA~l~-------g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
...++|+.+|+++ ..+++++|+| +++|+++++..++++||+|++++|.|..+...++ ..|.++..
T Consensus 67 g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G---~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~~~ 138 (397)
T PRK07568 67 GIPELREAFAKYYKKWGIDVEPDEILITNG---GSEAILFAMMAICDPGDEILVPEPFYANYNGFAT-----SAGVKIVP 138 (397)
T ss_pred CCHHHHHHHHHHHHHhCCCCCcceEEEcCC---hHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHH-----HcCCEEEE
Confidence 4577888888876 2467899999 9999999999989999999999999998776654 25777777
Q ss_pred eCCC--------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC------c
Q 013079 173 VDIS--------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS------P 235 (450)
Q Consensus 173 v~~~--------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~------~ 235 (450)
++.+ +++++++++ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.++ .
T Consensus 139 v~~~~~~g~~~~~~~~l~~~~-~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~ 217 (397)
T PRK07568 139 VTTKIEEGFHLPSKEEIEKLI-TPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSA 217 (397)
T ss_pred eecCcccCCCCCCHHHHHHhc-CccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccCh
Confidence 6642 468898888 788999999999999999975 789999999999999999999655422 1
Q ss_pred cCC----CCeEEEeCCCCccccCccceEEEEEcC-HHHHHHHHHHhhhhhhccCCCchHHHHHHHHccC-CcHHHHHHHH
Q 013079 236 ARL----GADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEH 309 (450)
Q Consensus 236 ~~~----g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~ 309 (450)
..+ +..+++.|+||.++++|+|+ ||++++ +++++.+...... ....+.+.+.++..++... .++.+..+.+
T Consensus 218 ~~~~~~~~~~i~~~S~SK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 294 (397)
T PRK07568 218 LSLEGLEDRVIIIDSVSKRYSACGARI-GCLISKNKELIAAAMKLCQA--RLSPPTLEQIGAAALLDTPESYFDEVREEY 294 (397)
T ss_pred hhcCCCcCCEEEEecchhhccCCCcce-EEEecCCHHHHHHHHHHhhc--cCCCCcHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 111 35689999999999999998 998874 6787776554331 1233445555555554432 3345555667
Q ss_pred HHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHh
Q 013079 310 CHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYL 372 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l 372 (450)
+++++.+.+.|++++. .+..|. .|.++|+.++.. ....|...+
T Consensus 295 ~~~~~~l~~~L~~~~~~~~~~p~-------------------g~~~~~~~l~~~-~~~~~~~~l 338 (397)
T PRK07568 295 KKRRDILYEELNKIPGVVCEKPK-------------------GAFYIIAKLPVD-DAEDFAKWL 338 (397)
T ss_pred HHHHHHHHHHHhcCCCceecCCC-------------------cceEEEEecCCC-CHHHHHHHH
Confidence 8888999999987632 333332 345688888742 244555554
No 138
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=1.9e-25 Score=229.04 Aligned_cols=287 Identities=17% Similarity=0.158 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHhC----------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 101 VLNLSRQMAALEG----------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 101 ~~~l~~~iA~l~g----------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
...||+.||++++ ++++++|+| +++++.+++.+++++||.|++++|.|+.+...+.. ..|.++
T Consensus 88 ~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~G---a~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~----~~g~~~ 160 (468)
T PLN02450 88 LPAFKNALAEFMSEIRGNKVTFDPNKLVLTAG---ATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKW----RTGVEI 160 (468)
T ss_pred hHHHHHHHHHHHHHhhCCCCCcChHHeEEccC---hHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhh----cCCcEE
Confidence 4567777777763 356899999 99999999999999999999999999998766531 157777
Q ss_pred EEeCCC-------CHHHHHHhhhc-----CCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc
Q 013079 171 TFVDIS-------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP 235 (450)
Q Consensus 171 ~~v~~~-------d~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~ 235 (450)
..++.+ |++++++++.+ .++++|++++||||||.+.+ +++|+++|+++|+++|+||+|..+.++.
T Consensus 161 v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~ 240 (468)
T PLN02450 161 VPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDS 240 (468)
T ss_pred EEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCC
Confidence 777642 66888887732 37899999999999999976 6688889999999999999996543211
Q ss_pred ------c------------CCCCeEEEeCCCCccccCccceEEEEEcCHH-HHHHHHHHhhhhhhccCCCchHHHHHHHH
Q 013079 236 ------A------------RLGADVVVHSISKFISGGADIIAGAVCGPAN-LVNSMMDLHQGALMLLGPTMNPKVAFELS 296 (450)
Q Consensus 236 ------~------------~~g~di~~~S~sK~~g~~g~~igG~l~~~~~-~~~~l~~~~~~~~~~~g~~~~~~~a~~~~ 296 (450)
. ..+..+++.|+||.++.+|+|+ ||++++++ +.+.+..... . ...+.+.+.++..++
T Consensus 241 ~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRi-G~li~~~~~l~~~~~~~~~-~--~~~s~~~Q~a~~~~L 316 (468)
T PLN02450 241 PGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRV-GAIYSNDEMVVSAATKMSS-F--GLVSSQTQYLLSALL 316 (468)
T ss_pred CCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccE-EEEEECCHHHHHHHHHHhh-c--CCCCHHHHHHHHHHh
Confidence 1 1245789999999999999999 99998754 4555544432 1 123445555555555
Q ss_pred ccCC----cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH------HHHH
Q 013079 297 ERIP----HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE------EKAN 366 (450)
Q Consensus 297 ~~~~----~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~------~~~~ 366 (450)
.... ++....+++.++++.+.+.|+++++.+..| ..|.++|+.++.. +...
T Consensus 317 ~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~-------------------~~g~flwi~l~~~~~~~~~~~~~ 377 (468)
T PLN02450 317 SDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKS-------------------NAGLFCWVDMRHLLKSNTFEAEM 377 (468)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-------------------CceEEEEEEchHhcCcCCchHHH
Confidence 4432 345556678889999999999886544322 2466899998621 1123
Q ss_pred HHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC---HHHHHHHHHHHHHHh
Q 013079 367 RLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT---LDQRWSQFEKALSRM 442 (450)
Q Consensus 367 ~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~---~~~~i~~l~~al~~~ 442 (450)
++...+.. ..| +.+..|+.+.. ..++++||+++ ..+ .++.++.|.+++.+.
T Consensus 378 ~l~~~ll~--~~g-V~v~PG~~f~~---------------------~~~g~~Rl~f~-~~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 378 ELWKKIVY--EVK-LNISPGSSCHC---------------------TEPGWFRVCFA-NMSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred HHHHHHHH--hCC-EEEeCccccCC---------------------CCCCEEEEEec-CCCHHHHHHHHHHHHHHHHhc
Confidence 34444422 123 45565543210 12578999999 633 334455555555443
No 139
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.95 E-value=3.5e-25 Score=220.29 Aligned_cols=308 Identities=17% Similarity=0.153 Sum_probs=211.4
Q ss_pred HHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchh
Q 013079 74 ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGG 153 (450)
Q Consensus 74 ~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~ 153 (450)
+.+.+.++. ++...+.+.+.....+...++++.++++++.+..+++++ |++++..++.+++++||+|+++.+.|..
T Consensus 37 ~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~---G~~~~~~~l~~~~~~gd~v~~~~~~~~~ 112 (360)
T TIGR00858 37 QAAQQGAEQ-YGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLFSS---GYLANVGVISALVGKGDLILSDALNHAS 112 (360)
T ss_pred HHHHHHHHh-cCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEECc---hHHHHHHHHHHhCCCCCEEEEEccccHH
Confidence 555555533 332222232222234678899999999999877777788 8888887888888999999999999999
Q ss_pred HHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhc---CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCC
Q 013079 154 THALLTHFFPRACNITTTFVDISDHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSP 230 (450)
Q Consensus 154 ~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~ 230 (450)
+...+. ..|.++..++..|++++++.+.. .++++|++++++|++|.+.|+++|.++|+++|+++|+|++|+.
T Consensus 113 ~~~~~~-----~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~ 187 (360)
T TIGR00858 113 LIDGCR-----LSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGT 187 (360)
T ss_pred HHHHHH-----hcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccc
Confidence 887764 35778888877799999998832 2578999999999999999999999999999999999999843
Q ss_pred C--CCCc---------cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHH-HHHHcc
Q 013079 231 L--VLSP---------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVA-FELSER 298 (450)
Q Consensus 231 ~--~~~~---------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a-~~~~~~ 298 (450)
. .... ...+.|+++.|+||.+++.| ||+++++++++.+...........+.......+ ..++..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 263 (360)
T TIGR00858 188 GVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG----AYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALEL 263 (360)
T ss_pred cCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC----cEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHH
Confidence 2 2110 01267899999999999754 899999888887754333111111222222222 223332
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccc
Q 013079 299 IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQF 378 (450)
Q Consensus 299 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~ 378 (450)
........+++.++++++.+.|++++.++. +. .|+++++.++......+|.+.|...
T Consensus 264 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~l~~~--- 320 (360)
T TIGR00858 264 IQEEPWRREKLLALIARLRAGLEALGFTLM-PS-------------------CTPIVPVIIGDNASALALAEELQQQ--- 320 (360)
T ss_pred HhhCHHHHHHHHHHHHHHHHHHHHcCCccC-CC-------------------CCCEEEEEeCCHHHHHHHHHHHHHC---
Confidence 233344566788899999999988765432 21 3568999987544466787777642
Q ss_pred cccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013079 379 GFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 379 g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 439 (450)
| +.+..+..... .-..+.||||++ ..++++.++.+.++|
T Consensus 321 g-I~v~~~~~~~~--------------------~~~~~~iRis~~-~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 321 G-IFVGAIRPPTV--------------------PAGTSRLRLTLS-AAHTPGDIDRLAEAL 359 (360)
T ss_pred C-eeEeeeCCCCC--------------------CCCCceEEEEEc-CCCCHHHHHHHHHhh
Confidence 3 44443211000 001358999999 877777777777665
No 140
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=6.8e-26 Score=225.12 Aligned_cols=278 Identities=15% Similarity=0.200 Sum_probs=196.0
Q ss_pred cCCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCC-CEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 94 SRHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 94 ~r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
.++..+...+|++.+|+++|. +++++|+| +++++.+++.+++++| |+|+++.|.|..+...++ ..|.++
T Consensus 55 ~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~G---s~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~-----~~g~~v 126 (354)
T PRK04635 55 NRYPECQPPELINAYSAYAGVAPEQILTSRG---ADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAE-----TFNVGV 126 (354)
T ss_pred ccCCCCCHHHHHHHHHHHhCcCHHHEEEeCC---HHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHH-----HcCCEE
Confidence 344555578899999999986 46899999 9999999999999998 899999999998876654 367888
Q ss_pred EEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc-CCEEEEeCCCCCCCCC--cc----CC
Q 013079 171 TFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK-GVTVVVDNTFSPLVLS--PA----RL 238 (450)
Q Consensus 171 ~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~-gi~livD~~~~~~~~~--~~----~~ 238 (450)
..++.+ |++.++ .+ +++++|++++||||||.+.+.+++.++++.. ++++|+|++|..+... .. ..
T Consensus 127 ~~v~~~~~~~~~~~~l~-~~--~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~ 203 (354)
T PRK04635 127 KALPLTADYQLPLDYIE-QL--DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASY 203 (354)
T ss_pred EEEecCCCCCCCHHHHH-hc--cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhC
Confidence 887654 566665 33 5899999999999999999999999998763 7999999999554321 11 12
Q ss_pred CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc--CCcHHHHHHHHHHHHHHH
Q 013079 239 GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER--IPHLGLRMKEHCHRALIF 316 (450)
Q Consensus 239 g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~--~~~l~~~~~~~~~~~~~l 316 (450)
...+++.|+||++|++|+|+ ||+++++++++.+...... ...+.+.+.++..++.. .+.+.++.+++.++++.+
T Consensus 204 ~~~iv~~S~SK~~~l~GlRl-G~~i~~~~~~~~l~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l 279 (354)
T PRK04635 204 PNLVVLRTLSKAFALAGARC-GFTLANEELIEILMRVIAP---YPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARL 279 (354)
T ss_pred CCEEEEechHHHhhhhHHHH-hhhhCCHHHHHHHHhhcCC---CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 45689999999999999999 9999999999888654431 11222333333333322 233445556678888999
Q ss_pred HHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccccccccc
Q 013079 317 ARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCS 395 (450)
Q Consensus 317 ~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~ 395 (450)
.+.|++++ ..+. |. .|.++++.+++. ..+.+.+.. .| +.+..++. +
T Consensus 280 ~~~L~~~~~~~~~-~~-------------------~g~f~~~~~~~~---~~~~~~l~~---~g-v~v~~~~~------~ 326 (354)
T PRK04635 280 QAALSMYGGAKVL-EG-------------------NGNYVLAKFDDV---DAVFKALWD---AG-IVARAYKD------P 326 (354)
T ss_pred HHHHHhCCCceEC-CC-------------------CCcEEEEECCCH---HHHHHHHHH---CC-EEEEECCC------C
Confidence 99999876 3443 32 245888888743 345555543 22 34332100 0
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 396 GSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 396 ~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
..++.||||+| . .+.++.|.++|+
T Consensus 327 -----------------~~~~~lRis~~-~---~e~~~~l~~al~ 350 (354)
T PRK04635 327 -----------------RLANCIRFSFS-N---RAETDKLIGLIR 350 (354)
T ss_pred -----------------CCCCeEEEEeC-C---HHHHHHHHHHHH
Confidence 01468999999 3 344566666664
No 141
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=9.3e-26 Score=224.33 Aligned_cols=278 Identities=13% Similarity=0.114 Sum_probs=190.6
Q ss_pred hhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 99 PTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
+....+|+.||++++. +++++|+| +++++.+++..+ .+|+ +++..|.|..+...++ ..|.++..++.+
T Consensus 55 ~~~~~lr~~ia~~~~~~~~~i~it~G---a~~~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~-----~~g~~~~~v~~~ 124 (356)
T PRK08056 55 VEYRHLHQALARHHQVPASWILAGNG---ETESIFAVVSGL-KPRR-AMIVTPGFAEYRRALQ-----QVGCEIRRYSLR 124 (356)
T ss_pred ccHHHHHHHHHHHhCcChhhEEECCC---HHHHHHHHHHHh-CCCC-EEEeCCCcHHHHHHHH-----HcCCeEEEEecc
Confidence 3468999999999975 56899999 999999998876 6675 6778899998877664 367788777643
Q ss_pred -----CH-HHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-------cCCCC
Q 013079 177 -----DH-EMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-------ARLGA 240 (450)
Q Consensus 177 -----d~-~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-------~~~g~ 240 (450)
++ +++.+.+ .+++++|++++||||||.+.+ +++|+++|+++++++|+|++|..+.... ...+.
T Consensus 125 ~~~~~~~~~~~~~~~-~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 203 (356)
T PRK08056 125 EADGWQLTDAILEAL-TPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPH 203 (356)
T ss_pred cccCCCccHHHHHhc-cCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCC
Confidence 22 3555667 688999999999999999988 7889999999999999999985553211 12357
Q ss_pred eEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH
Q 013079 241 DVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARR 319 (450)
Q Consensus 241 di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~ 319 (450)
+++++|+||++|++|+|+ ||++. ++++++.+...... ...+.+.+.++..++....+..+..++++++++++.+.
T Consensus 204 ~i~~~S~SK~~~~~G~Ri-G~~v~~~~~~~~~l~~~~~~---~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~ 279 (356)
T PRK08056 204 LWVLRSLTKFYAIPGLRL-GYLVNSDDAAVARMRRQQMP---WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQA 279 (356)
T ss_pred EEEEEechhhccCcchhh-eeeecCCHHHHHHHHHhCCC---CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999 99987 46777777654321 11222333333333332233444456678888999999
Q ss_pred HHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccc
Q 013079 320 MKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSS 398 (450)
Q Consensus 320 L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~ 398 (450)
|++++. .+ .|. .|+++++.++.. ...|.+.|... | +.+..|+..
T Consensus 280 L~~~~~~~~-~~~-------------------~~~~~~~~~~~~--~~~~~~~l~~~---g-I~v~~~~~f--------- 324 (356)
T PRK08056 280 LCALPLLTV-WPG-------------------RANYLFLRCERP--DIDLQRALLTQ---R-ILIRSCANY--------- 324 (356)
T ss_pred HhcCCCcEE-cCC-------------------CCcEEEEEcCCC--hHHHHHHHHHC---C-eEEEECCCC---------
Confidence 987643 33 222 356888888632 34566666542 3 455544321
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 399 TSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 399 ~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.+...++||||++ . .+..+.|.++|.++
T Consensus 325 ------------~~~~~~~iRis~~-~---~~~~~~l~~~l~~~ 352 (356)
T PRK08056 325 ------------PGLDSRYYRVAIR-S---AAENERLLAALRNV 352 (356)
T ss_pred ------------CCCCCCEEEEEEc-C---HHHHHHHHHHHHHH
Confidence 0122478999999 4 23334555555544
No 142
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=3.8e-25 Score=219.26 Aligned_cols=310 Identities=18% Similarity=0.189 Sum_probs=213.7
Q ss_pred HHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchh
Q 013079 74 ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGG 153 (450)
Q Consensus 74 ~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~ 153 (450)
+++.+.++. ++++.+.|.+.....+..+++++.++++++.+..+++++ |++++.+++..++++||+|+++++.|++
T Consensus 22 ~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~s---g~~a~~~~~~~~~~~gd~Vl~~~~~~~~ 97 (349)
T cd06454 22 EAAKEALDK-YGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSS---GYAANDGVLSTLAGKGDLIISDSLNHAS 97 (349)
T ss_pred HHHHHHHHH-hCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEecc---HHHHHHHHHHHhcCCCCEEEEehhhhHH
Confidence 666666653 444333343333457889999999999999988888899 9999998888888999999999999998
Q ss_pred HHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhc----CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC
Q 013079 154 THALLTHFFPRACNITTTFVDISDHEMVNSAIVQ----GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS 229 (450)
Q Consensus 154 ~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~----~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~ 229 (450)
+...+. ..|.++.+++..|++++++++.. +++++|++++++||||.+.|+++|+++|+++|+++|+|++|.
T Consensus 98 ~~~~~~-----~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~ 172 (349)
T cd06454 98 IIDGIR-----LSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHS 172 (349)
T ss_pred HHHHHH-----HcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEcccc
Confidence 876664 25778887777788889888832 357899999999999999999999999999999999999983
Q ss_pred -C-CCC--------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHH---HHHHHH
Q 013079 230 -P-LVL--------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK---VAFELS 296 (450)
Q Consensus 230 -~-~~~--------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~---~a~~~~ 296 (450)
+ +.. .....++|+++.|+||.++++| |+++.++++.+.+....... ..+.+.... ++...+
T Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g----G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l 246 (349)
T cd06454 173 VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG----GYIAGSKELIDYLRSYARGF--IFSTSLPPAVAAAALAAL 246 (349)
T ss_pred ccccCCCCCChhhhccccccCcEEEeechhhhcccC----CEEECCHHHHHHHHHhchhh--hccCCCCHHHHHHHHHHH
Confidence 2 211 1123478999999999999753 88888888887775543211 111122222 222222
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccc
Q 013079 297 ERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYA 376 (450)
Q Consensus 297 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~ 376 (450)
+.......+.+++.++++.+.+.|.+++..+..+. .+.++++.++......++.+.|...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~L~~~- 306 (349)
T cd06454 247 EVLQGGPERRERLQENVRYLRRGLKELGFPVGGSP-------------------SHIIPPLIGDDPAKAVAFSDALLER- 306 (349)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHhcCCcccCCC-------------------CCcEEEEeCCChHHHHHHHHHHHhC-
Confidence 22222345566778888999999988765432221 1224555444333456777777642
Q ss_pred cccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 377 QFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 377 ~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
| +.++.++... .....+.|||+++ ...+++.++.+.++|+++
T Consensus 307 --g-I~~~~~~~~~--------------------~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 307 --G-IYVQAIRYPT--------------------VPRGTARLRISLS-AAHTKEDIDRLLEALKEV 348 (349)
T ss_pred --C-ceEEEecCCc--------------------cCCCCCeEEEEEe-CCCCHHHHHHHHHHHHHh
Confidence 3 4443321100 0011478999999 877888888888887654
No 143
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=1.3e-25 Score=223.08 Aligned_cols=277 Identities=13% Similarity=0.184 Sum_probs=193.4
Q ss_pred CChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 97 FNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
..+...++|+++|++++. +++++|+| +++++..++.++ .+ +.|+++.|.|+.+...+. ..|.++..++
T Consensus 52 ~~~~~~~lr~~ia~~~~~~~~~i~it~G---a~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~-----~~g~~~~~~~ 121 (354)
T PRK06358 52 PDPDYLELRKRIASFEQLDLENVILGNG---ATELIFNIVKVT-KP-KKVLILAPTFAEYERALK-----AFDAEIEYAE 121 (354)
T ss_pred CCccHHHHHHHHHHHhCCChhhEEECCC---HHHHHHHHHHHh-CC-CcEEEecCChHHHHHHHH-----HcCCeeEEEe
Confidence 344567999999999875 56899999 999999999875 44 689999999999887774 2577777765
Q ss_pred CC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----c---
Q 013079 175 IS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----A--- 236 (450)
Q Consensus 175 ~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~--- 236 (450)
.+ | +++.+.+ ..++++|++++||||||.+.+ +++|+++|+++++++|+|++|..+..+. .
T Consensus 122 ~~~~~~~~~d-~~~~~~~-~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 199 (354)
T PRK06358 122 LTEETNFAAN-EIVLEEI-KEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYL 199 (354)
T ss_pred CccccCCCcc-HHHHHhh-ccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhc
Confidence 42 4 4555556 567999999999999999986 7788889999999999999996654331 1
Q ss_pred -CCCCeEEEeCCCCccccCccceEEEEEcC-HHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013079 237 -RLGADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRAL 314 (450)
Q Consensus 237 -~~g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 314 (450)
..+..++++|+||.+|++|+|+ ||++.+ +.+++.+...+.. ...+.+.+.++..++...+++.+..+.+.++++
T Consensus 200 ~~~~~vi~~~S~SK~~gl~G~Ri-G~lv~~~~~~~~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 275 (354)
T PRK06358 200 ENFKNLIIIRAFTKFFAIPGLRL-GYGLTSNKNLAEKLLQMREP---WSINTFADLAGQTLLDDKEYIKKTIQWIKEEKD 275 (354)
T ss_pred cCCCCEEEEEechhhccCcchhh-eeeecCCHHHHHHHHHhCCC---CcchHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 1246799999999999999999 999874 6777877765541 122333444444444332344556667788889
Q ss_pred HHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccccccc
Q 013079 315 IFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMS 393 (450)
Q Consensus 315 ~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~ 393 (450)
.+.+.|++++. .+..| .|+++++.++.. ..|.+.|... | +.+..|+..
T Consensus 276 ~l~~~L~~~~~~~~~~~--------------------~g~f~~~~~~~~---~~~~~~l~~~---g-I~v~~~~~f---- 324 (354)
T PRK06358 276 FLYNGLSEFKGIKVYKP--------------------SVNFIFFKLEKP---IDLRKELLKK---G-ILIRSCSNY---- 324 (354)
T ss_pred HHHHHHhcCCCcEEcCC--------------------cceEEEEEcCch---HHHHHHHHHC---C-eEEEECCCC----
Confidence 99999987633 33322 245888988753 4566666542 3 455544321
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013079 394 CSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 437 (450)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 437 (450)
.+..+++||||+|..++.+.+++.|.+
T Consensus 325 -----------------~~~~~~~iRls~~~~~~~~~l~~~l~~ 351 (354)
T PRK06358 325 -----------------RGLDENYYRVAVKSREDNKKLLKALEV 351 (354)
T ss_pred -----------------CCCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 011257899999922445555555443
No 144
>PRK08363 alanine aminotransferase; Validated
Probab=99.95 E-value=2.1e-25 Score=225.21 Aligned_cols=216 Identities=17% Similarity=0.166 Sum_probs=161.9
Q ss_pred hhHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 99 PTVLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
+...+||+.||++++ .+++++|+| +++|+.+++.+++++||+|+++.|+|..+...+. ..|..+
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G---~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~ 141 (398)
T PRK08363 70 EGLPELREAIVKREKRKNGVDITPDDVRVTAA---VTEALQLIFGALLDPGDEILIPGPSYPPYTGLVK-----FYGGVP 141 (398)
T ss_pred CCcHHHHHHHHHHHHHhcCCCCChhhEEEeCC---HHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----HcCCEE
Confidence 445678888888762 356899999 9999999999999999999999999999987764 245555
Q ss_pred EEe-CC------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----
Q 013079 171 TFV-DI------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP----- 235 (450)
Q Consensus 171 ~~v-~~------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~----- 235 (450)
..+ +. .|++++++++ ++++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++.
T Consensus 142 v~~~~~~~~~~~~d~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~ 220 (398)
T PRK08363 142 VEYRTIEEEGWQPDIDDIRKKI-TEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSP 220 (398)
T ss_pred EEeccccccCCcCCHHHHHhhC-CcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCH
Confidence 554 22 2688899888 778999999999999999987 8899999999999999999986554321
Q ss_pred cCC---CCeEEEeCCCCccccCccceEEEEEc--CHHHHHHHHHHhhhh--hhccCCCchHHHHHHHHcc-CCcHHHHHH
Q 013079 236 ARL---GADVVVHSISKFISGGADIIAGAVCG--PANLVNSMMDLHQGA--LMLLGPTMNPKVAFELSER-IPHLGLRMK 307 (450)
Q Consensus 236 ~~~---g~di~~~S~sK~~g~~g~~igG~l~~--~~~~~~~l~~~~~~~--~~~~g~~~~~~~a~~~~~~-~~~l~~~~~ 307 (450)
..+ ...+++.|+||.++.+|+|+ ||++. ++++++.+....... .....+.+.+.++..++.. .+++.+..+
T Consensus 221 ~~~~~~~~vi~~~SfSK~~~~~GlRi-G~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~ 299 (398)
T PRK08363 221 GSLTKDVPVIVMNGLSKVYFATGWRL-GYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMK 299 (398)
T ss_pred HHcCcCCcEEEEecchhccCCccceE-EEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHH
Confidence 111 35688999999999999999 99876 666766655433211 0123344455555444443 345556667
Q ss_pred HHHHHHHHHHHHHHhCC
Q 013079 308 EHCHRALIFARRMKKLG 324 (450)
Q Consensus 308 ~~~~~~~~l~~~L~~~~ 324 (450)
+++++++.+.+.|++++
T Consensus 300 ~~~~~~~~l~~~L~~~~ 316 (398)
T PRK08363 300 KLKERRDYIYKRLNEIP 316 (398)
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 78888899999998763
No 145
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=3.2e-25 Score=222.97 Aligned_cols=284 Identities=17% Similarity=0.176 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHh----C----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 101 VLNLSRQMAALE----G----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
..+||+.+|+.+ | .+++++|+| +++|+.+++.+++++||+|++++|.|..+...+. ..|.++..
T Consensus 69 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G---~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~g~~~~~ 140 (386)
T PRK07550 69 LPELREAYAAHYSRLYGAAISPEQVHITSG---CNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLD-----MLGIRPVY 140 (386)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcceEEEecC---cHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-----hcCCEEEE
Confidence 445555555554 3 367899999 9999999999999999999999999998877664 26888877
Q ss_pred eCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC---c---c
Q 013079 173 VDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS---P---A 236 (450)
Q Consensus 173 v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~---~---~ 236 (450)
++.+ |++++++++ ++++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+... + .
T Consensus 141 v~~~~~~~~~~~~~~l~~~~-~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~ 219 (386)
T PRK07550 141 LPCDEGPGLLPDPAAAEALI-TPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLF 219 (386)
T ss_pred EecCCCcCCCCCHHHHHHHh-cccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchh
Confidence 7753 688899988 778999999999999999976 789999999999999999998554321 1 1
Q ss_pred C---C-CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCC-cHHHHHHHHHH
Q 013079 237 R---L-GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP-HLGLRMKEHCH 311 (450)
Q Consensus 237 ~---~-g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~-~l~~~~~~~~~ 311 (450)
. . ...+++.|+||.+|.+|+|+ ||+++++++++.+....... ....+...+.++..++...+ ++.+..+.+.+
T Consensus 220 ~~~~~~~~~i~~~S~SK~~g~~G~Ri-G~i~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 297 (386)
T PRK07550 220 ADPDWDDTLVHLYSFSKSYALTGHRV-GAVVASPARIAEIEKFMDTV-AICAPRIGQIAVAWGLPNLADWRAGNRAEIAR 297 (386)
T ss_pred hCCCccccEEEEecchhhccCcccce-EeeecCHHHHHHHHHHHhhc-ccCCCcHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 1 1 24688999999999999998 99999998888887655411 12234444444444443322 23333455678
Q ss_pred HHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhcccccccccccccccc
Q 013079 312 RALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGFMAVSLGYYE 389 (450)
Q Consensus 312 ~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~~~~~l~~~~~~g~i~vs~G~~~ 389 (450)
+++.+.+.|++++ ..+ .| ..|.++|+.++. ..+..++...|.. +.| +.+..|+..
T Consensus 298 ~~~~l~~~L~~~~~~~~-~~-------------------~g~~~~~~~~~~~~~~~~~l~~~l~~--~~g-v~v~pg~~f 354 (386)
T PRK07550 298 RRDAFRAVFARLPGWEL-LA-------------------SGAYFAYVRHPFPDRPSREVARRLAK--EAG-ILCLPGTMF 354 (386)
T ss_pred HHHHHHHHHHhCCCcee-CC-------------------CceEEEEecCCCCCCCHHHHHHHHHH--hcC-EEEeCchhh
Confidence 8888999998762 222 12 135688888863 2235567666532 123 455444321
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 390 TLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 390 s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
. ...+++||||++ ..+ ++.++...+.|.+
T Consensus 355 ~---------------------~~~~~~iRis~~-~~~-~~~~~~~~~~l~~ 383 (386)
T PRK07550 355 G---------------------PGQEGYLRLAFA-NAD-VAGIGELVERLRA 383 (386)
T ss_pred C---------------------CCCCCEEEEEee-cCC-HHHHHHHHHHHHh
Confidence 0 011468999999 654 3344444444443
No 146
>PRK03321 putative aminotransferase; Provisional
Probab=99.95 E-value=5.1e-26 Score=225.93 Aligned_cols=276 Identities=16% Similarity=0.178 Sum_probs=200.5
Q ss_pred ChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 98 NPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
.+....+++.+|++++.+ ++++|+| +++++..++..++++||+|+++.|.|..+...++ ..|.++..++.
T Consensus 56 ~~g~~~lr~~ia~~~~~~~~~I~~~~G---~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~-----~~g~~~~~v~~ 127 (352)
T PRK03321 56 DMGAVELRAALAEHLGVPPEHVAVGCG---SVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQ-----VAGATPVQVPL 127 (352)
T ss_pred CCcHHHHHHHHHHHhCcCHHHEEECCC---HHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHH-----HcCCEEEEccC
Confidence 346789999999999864 5899999 9999999998889999999999999988766554 25778777775
Q ss_pred C-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHh--cCCEEEEeCCCCCCCCCc-----c----CCC
Q 013079 176 S-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD--KGVTVVVDNTFSPLVLSP-----A----RLG 239 (450)
Q Consensus 176 ~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~--~gi~livD~~~~~~~~~~-----~----~~g 239 (450)
+ |++++++++ ++++++|++++|+||||.+.|.++|.++|+. +++++|+|++|..+.+.. . ..+
T Consensus 128 ~~~~~~~~~~l~~~~-~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 206 (352)
T PRK03321 128 TPDHTHDLDAMAAAI-TDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHP 206 (352)
T ss_pred CCCCCCCHHHHHHhh-ccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCC
Confidence 4 789999988 7789999999999999999999999999987 599999999985543321 1 114
Q ss_pred CeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH
Q 013079 240 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARR 319 (450)
Q Consensus 240 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~ 319 (450)
..++++|+||.+|.+|.|+ ||+++++++++.+..... ....+.+.+.++...+...+...++.++..++++.+.+.
T Consensus 207 ~vi~~~S~SK~~g~~GlRi-G~~v~~~~~~~~~~~~~~---~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~ 282 (352)
T PRK03321 207 NVVVLRTFSKAYGLAGLRV-GYAVGHPEVIAALRKVAV---PFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAA 282 (352)
T ss_pred CEEEEecchHHhhhHHHhh-hhhcCCHHHHHHHHHhcC---CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999998 999999999988876532 122334444444444433344555566666667788888
Q ss_pred HHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccccccccccccc
Q 013079 320 MKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSST 399 (450)
Q Consensus 320 L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~ 399 (450)
|++.++.+ .| ..|.++++.++. ....|.+.|.. .| +.+.. .
T Consensus 283 L~~~~~~~-~~-------------------~~g~~i~i~l~~--~~~~~~~~l~~---~g-I~v~~-----------~-- 323 (352)
T PRK03321 283 LRAAGWTV-PP-------------------SQANFVWLPLGE--RTADFAAAAAE---AG-VVVRP-----------F-- 323 (352)
T ss_pred HHHCCCcc-CC-------------------CCCCEEEEeCCC--CHHHHHHHHHH---CC-EEEEc-----------c--
Confidence 98765432 11 136688888863 24567777754 23 33221 0
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013079 400 SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 400 ~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 439 (450)
....|||+++..++.+.+++.|.+++
T Consensus 324 --------------~~~~iRi~~~~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 324 --------------AGEGVRVTIGAPEENDAFLRAARAWR 349 (352)
T ss_pred --------------CCCcEEEeeCCHHHHHHHHHHHHHHh
Confidence 12459999993355566666665554
No 147
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.1e-25 Score=222.62 Aligned_cols=242 Identities=15% Similarity=0.177 Sum_probs=172.5
Q ss_pred hhHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 99 PTVLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
.....+|+.+|++++ .+++++|+| ++++++.++.+++++||.|++++|.|..+...+. ..|+++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G---~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~-----~~g~~v 144 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCG---AAGALNVALKAILNPGDEVIVFAPYFVEYRFYVD-----NHGGKL 144 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCC---hHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH-----HcCCEE
Confidence 445667788888763 456899999 9999999999999999999999999999877664 268888
Q ss_pred EEeCCC------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHh------cCCEEEEeCCCCCCCCCc
Q 013079 171 TFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHD------KGVTVVVDNTFSPLVLSP 235 (450)
Q Consensus 171 ~~v~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~------~gi~livD~~~~~~~~~~ 235 (450)
.+++.+ |++++++++ ++++++|++++|+||||.+.+ +++|+++|++ ||+++|+|++|..+.++.
T Consensus 145 ~~v~~~~~~~~~d~~~l~~~~-~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~ 223 (394)
T PRK06836 145 VVVPTDTDTFQPDLDALEAAI-TPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDG 223 (394)
T ss_pred EEEecCCccCcCCHHHHHhhc-CcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCC
Confidence 887653 689999999 789999999999999999987 6677888888 899999999996554321
Q ss_pred ---c----CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHH--H----HHHhhhhhhccCCCchHHHHHHHHccCCcH
Q 013079 236 ---A----RLGADVVVHSISKFISGGADIIAGAVCGPANLVNS--M----MDLHQGALMLLGPTMNPKVAFELSERIPHL 302 (450)
Q Consensus 236 ---~----~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~--l----~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l 302 (450)
. ..+.++++.|+||.++.+|.|+ ||++.++.+.+. + ............+.+.+.++...+..
T Consensus 224 ~~~~~~~~~~~~~i~~~S~SK~~~~pGlRi-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---- 298 (394)
T PRK06836 224 AEVPYIFKYYDNSIVVYSFSKSLSLPGERI-GYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA---- 298 (394)
T ss_pred CCCCChHHccCcEEEEecchhhccCcceee-EEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC----
Confidence 1 1246899999999999999998 999988765332 1 11111000011122223333222222
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 303 GLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 303 ~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
....+++.++++.+.+.|++++..+..|. .|.++|+.++.. ...++.+.+..
T Consensus 299 ~~~~~~~~~~r~~l~~~L~~~g~~~~~~~-------------------gg~~~~~~~~~~-~~~~~~~~l~~ 350 (394)
T PRK06836 299 TVDVSIYKRNRDLLYDGLTELGFECVKPQ-------------------GAFYLFPKSPEE-DDVAFCEKAKK 350 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEeecCC-------------------ceEEEEEeCCCC-CHHHHHHHHHh
Confidence 12345567788889999988776544332 466888888642 24556666654
No 148
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.95 E-value=2.5e-25 Score=218.95 Aligned_cols=277 Identities=18% Similarity=0.158 Sum_probs=199.9
Q ss_pred ccCCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 93 YSRHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 93 y~r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
+.++.++...++|+.+|+++|. +.+++|+| +++++.++... +.+| .|++++|+|..+...+. ..|+++
T Consensus 41 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G---~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~-----~~g~~~ 110 (330)
T TIGR01140 41 WARYPDPEYDELRAAAAAYYGLPAASVLPVNG---AQEAIYLLPRL-LAPG-RVLVLAPTYSEYARAWR-----AAGHEV 110 (330)
T ss_pred HhhCCCccHHHHHHHHHHHhCCChhhEEECCC---HHHHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHH-----HcCCEE
Confidence 4455555569999999999985 56899999 99999987655 5677 69999999999887764 368888
Q ss_pred EEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC--cc----CCCCe
Q 013079 171 TFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS--PA----RLGAD 241 (450)
Q Consensus 171 ~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~--~~----~~g~d 241 (450)
..++ |++++++.+ + ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+... .. ..+.+
T Consensus 111 ~~~~--d~~~l~~~~-~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 186 (330)
T TIGR01140 111 VELP--DLDRLPAAL-E-ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGL 186 (330)
T ss_pred EEeC--CHHHHHhhc-c-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCE
Confidence 8877 899999888 4 5789999999999999998 667788889999999999998544322 11 12578
Q ss_pred EEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMK 321 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~ 321 (450)
+++.|+||.+|++|.|+ ||++.++++++.+...... ...+.+++.++...+....+.....++++++++.+.+.|+
T Consensus 187 i~~~S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 262 (330)
T TIGR01140 187 VVLRSLTKFFGLAGLRL-GFVVAHPALLARLREALGP---WTVNGPARAAGRAALADTAWQAATRARLAAERARLAALLA 262 (330)
T ss_pred EEEEecchhhcCchhhh-hheeCCHHHHHHHHhcCCC---CCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 9999999988888766541 2223334444434443333344555667889999999999
Q ss_pred hCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccC
Q 013079 322 KLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTS 400 (450)
Q Consensus 322 ~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~ 400 (450)
+++. ++ .| +.|.++|+.+++. ..|.+.|... | +.+..|...
T Consensus 263 ~~~~~~~-~~-------------------~~~~f~~~~~~~~---~~l~~~l~~~---g-i~v~pg~~f----------- 304 (330)
T TIGR01140 263 RLGGLEV-VG-------------------GTALFLLVRTPDA---AALHEALARR---G-ILIRDFDNF----------- 304 (330)
T ss_pred hCCCceE-CC-------------------CCCeEEEEEcCCH---HHHHHHHHHC---C-EEEEECCCC-----------
Confidence 8864 32 22 2456888888753 4566666542 3 454544321
Q ss_pred CCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013079 401 SELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 401 ~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 439 (450)
.+...++|||+++ ..+ +. +.|.++|
T Consensus 305 ----------~~~~~~~iRi~~~-~~~--~~-~~~~~~l 329 (330)
T TIGR01140 305 ----------PGLDPRYLRFALP-TDE--EN-DRLEEAL 329 (330)
T ss_pred ----------CCCCCCEEEEEec-CHH--HH-HHHHHhh
Confidence 0122478999999 532 33 6666554
No 149
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=4.7e-25 Score=224.43 Aligned_cols=287 Identities=15% Similarity=0.181 Sum_probs=195.1
Q ss_pred hHHHHHHHHHHHhC----------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 100 TVLNLSRQMAALEG----------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 100 ~~~~l~~~iA~l~g----------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
....||+.+|++++ ++++++|+| +++|+.+++.+++.+||.|+++.|.|+++...+.. + .|++
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G---~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~---~-~g~~ 168 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAG---ATAANELLTFILADPGDALLVPTPYYPGFDRDLRW---R-TGVK 168 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCC---hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHh---c-CCcE
Confidence 34567777777653 245899999 99999999999999999999999999998765531 1 4677
Q ss_pred EEEeCCC-------CHHHHHHhhhc-----CCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC
Q 013079 170 TTFVDIS-------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS 234 (450)
Q Consensus 170 v~~v~~~-------d~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~ 234 (450)
+..++.+ |++++++++.. .++++|++++||||||.+.+ +++|.++|+++|+++|+||+|....++
T Consensus 169 vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~ 248 (447)
T PLN02607 169 IVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFS 248 (447)
T ss_pred EEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccC
Confidence 7766542 67888888732 37899999999999999986 778999999999999999999543221
Q ss_pred ------cc---------C-CCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhhhhhhccCCCchHHHHHHHHc
Q 013079 235 ------PA---------R-LGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKVAFELSE 297 (450)
Q Consensus 235 ------~~---------~-~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~ 297 (450)
.. . ....+++.|+||.+|.+|.|+ ||++. ++.+...+..... . ...+.+.+..+..++.
T Consensus 249 ~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRv-G~ivs~n~~l~~~~~~~~~-~--~~~s~~~q~~~~~~L~ 324 (447)
T PLN02607 249 ASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRV-GTIYSYNDKVVTTARRMSS-F--TLVSSQTQHLLASMLS 324 (447)
T ss_pred CCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceE-EEEEEcCHHHHHHHHHHhh-c--CCCCHHHHHHHHHHhC
Confidence 11 1 134688999999999999999 99987 6667666654432 0 1223344444444444
Q ss_pred cCCc----HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH------HHHHH
Q 013079 298 RIPH----LGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE------EKANR 367 (450)
Q Consensus 298 ~~~~----l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~------~~~~~ 367 (450)
..+. +....+++.++++.+.+.|+++++.+..| ..|.++|++++.. +...+
T Consensus 325 d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~-------------------~ag~fvw~~L~~~~~~~~~~~e~~ 385 (447)
T PLN02607 325 DEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKG-------------------NAGLFCWMNLSPLLETPTREGELA 385 (447)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC-------------------CeeEEEEEEchHhhcCCCchhHHH
Confidence 4332 33444557788888999999876543322 3577999998621 22234
Q ss_pred HHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC---HHHHHHHHHHHHHH
Q 013079 368 LMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT---LDQRWSQFEKALSR 441 (450)
Q Consensus 368 ~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~---~~~~i~~l~~al~~ 441 (450)
+.+.+.. ..| +.++.|+.+. ...++++||+|+ ..+ .++.+++|.+++.+
T Consensus 386 l~~~ll~--~~g-V~v~pG~~f~---------------------~~~~g~fRi~fa-~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 386 LWDSILR--EVK-LNISPGSSCH---------------------CSEPGWFRVCFA-NMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred HHHHHHH--hCC-EEEcCccccC---------------------CCCCCEEEEEec-cCCHHHHHHHHHHHHHHHHH
Confidence 5544432 123 4556564321 012589999999 633 44445555555543
No 150
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=4.1e-25 Score=227.38 Aligned_cols=285 Identities=17% Similarity=0.189 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHhC----------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 101 VLNLSRQMAALEG----------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 101 ~~~l~~~iA~l~g----------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
..++|+.||++++ ++++++|+| +++|+.+++.+++++||.|+++.|.|+++...+.. + .|+++
T Consensus 96 ~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~G---a~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~---~-~G~~v 168 (496)
T PLN02376 96 LKKFRQAIAHFMGKARGGKVTFDPERVVMSGG---ATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRW---R-TGVEI 168 (496)
T ss_pred cHHHHHHHHHHHHHHhCCCCcCChhhEEEccc---hHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHh---h-CCCEE
Confidence 3456677776653 356899999 99999999999999999999999999999875531 1 57788
Q ss_pred EEeCCC-------CHHHHHHhhh-----cCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc
Q 013079 171 TFVDIS-------DHEMVNSAIV-----QGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP 235 (450)
Q Consensus 171 ~~v~~~-------d~~~l~~ai~-----~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~ 235 (450)
..++.+ |++++++++. ..++++|++++||||||.+.+ +++|+++|+++++++|+||+|..+.++.
T Consensus 169 v~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~ 248 (496)
T PLN02376 169 IPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG 248 (496)
T ss_pred EEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC
Confidence 777652 6777765531 247899999999999999987 6678889999999999999996543321
Q ss_pred ---c---CC-----------CCeEEEeCCCCccccCccceEEEEEcC-HHHHHHHHHHhhhhhhccCCCchHHHHHHHHc
Q 013079 236 ---A---RL-----------GADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGALMLLGPTMNPKVAFELSE 297 (450)
Q Consensus 236 ---~---~~-----------g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~ 297 (450)
. .+ ...+++.|+||.+|.+|+|+ ||++.+ +.+.+.+..... . ...+.+.+.++..++.
T Consensus 249 ~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRv-G~li~~~~~l~~~~~~~~~-~--~~vs~~~Q~a~~~~L~ 324 (496)
T PLN02376 249 GDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRV-GIVYSFNDSVVSCARKMSS-F--GLVSSQTQLMLASMLS 324 (496)
T ss_pred CCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceE-EEEEECCHHHHHHHHHHhh-c--CCCCHHHHHHHHHHhC
Confidence 0 01 12356899999999999999 999885 555554443332 1 1223344444444444
Q ss_pred cCCcHH----HHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-------HHHH
Q 013079 298 RIPHLG----LRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-------EKAN 366 (450)
Q Consensus 298 ~~~~l~----~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-------~~~~ 366 (450)
..+.+. ...+++.++++.+.+.|++.++.+..| ..|.++|++++.. +...
T Consensus 325 d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~-------------------~aG~flwi~l~~~~~~~~~~~~e~ 385 (496)
T PLN02376 325 DDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTS-------------------NAGLFAWMDLRHLLRDRNSFESEI 385 (496)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-------------------CceEEEEEEchhhhccCCchhHHH
Confidence 333222 234556788888999998876554322 2577999998631 1123
Q ss_pred HHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC---HHHHHHHHHHHHH
Q 013079 367 RLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT---LDQRWSQFEKALS 440 (450)
Q Consensus 367 ~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~---~~~~i~~l~~al~ 440 (450)
.|.+.+.. ..| +.++.|+.+.. -.++++||+++ ..+ .++.+++|.+++.
T Consensus 386 ~l~~~ll~--~~g-V~v~pGs~F~~---------------------~~~g~~Ri~fa-~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 386 ELWHIIID--KVK-LNVSPGSSFRC---------------------TEPGWFRICFA-NMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred HHHHHHHH--cCC-EEEeCccccCC---------------------CCCCEEEEEee-CCCHHHHHHHHHHHHHHHH
Confidence 45554432 123 56666643210 01579999999 633 3334455555554
No 151
>PRK08175 aminotransferase; Validated
Probab=99.95 E-value=4e-25 Score=222.88 Aligned_cols=243 Identities=16% Similarity=0.127 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHh----C----CC-eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 101 VLNLSRQMAALE----G----TE-AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~-~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
..++|+.+|+++ | .+ ++++|+| +++++++++..++++||+|++++|+|+.+...+. ..|.++.
T Consensus 69 ~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G---~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~ 140 (395)
T PRK08175 69 IPRLRRAISRWYQDRYDVDIDPESEAIVTIG---SKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAV-----IAGAQVR 140 (395)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEccC---cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-----HcCCeEE
Confidence 456677777654 3 24 5899999 9999999999999999999999999998876664 2577877
Q ss_pred EeCCC----CHHHHHHhhhc--CCceEEEEecCCCCcccccCH---HHHHHHHHhcCCEEEEeCCCCCCCCCc------c
Q 013079 172 FVDIS----DHEMVNSAIVQ--GRTKVLYFESISNPTLAVANI---PELSRLAHDKGVTVVVDNTFSPLVLSP------A 236 (450)
Q Consensus 172 ~v~~~----d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~l---~~I~~la~~~gi~livD~~~~~~~~~~------~ 236 (450)
.++.+ +.+++++++.. +++++|++++|+||||.+.+. ++|+++|+++|+++|+|++|..+.++. .
T Consensus 141 ~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~ 220 (395)
T PRK08175 141 SVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIM 220 (395)
T ss_pred EEecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchh
Confidence 77654 47788887732 478999999999999999876 799999999999999999985443221 1
Q ss_pred C----CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccC-CcHHHHHHHHHH
Q 013079 237 R----LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRMKEHCH 311 (450)
Q Consensus 237 ~----~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~~~~~~ 311 (450)
. .+..+++.|+||.+|.+|+|+ ||++.++++++.+....... ....+.+.+.++..++... .++....+.+++
T Consensus 221 ~~~~~~~~~i~~~S~SK~~g~pGlRi-G~~~~~~~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 298 (395)
T PRK08175 221 QVPGAKDVAVEFFTLSKSYNMAGWRI-GFMVGNPELVSALARIKSYH-DYGTFTPLQVAAIAALEGDQQCVRDIAEQYKR 298 (395)
T ss_pred cCCCcccCEEEEeeccccccCcchhh-eeeeCCHHHHHHHHHHHhhc-ccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 1 134578899999999999999 99999999999887665411 1223344444444444332 234445566788
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHH---HHHHHHHHh
Q 013079 312 RALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEE---KANRLMNYL 372 (450)
Q Consensus 312 ~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~---~~~~~~~~l 372 (450)
+++.+.+.|++++..+..|. .|.++|++++... ....|...+
T Consensus 299 ~~~~~~~~L~~~~~~~~~p~-------------------~g~~i~i~l~~~~~~~~~~~~~~~l 343 (395)
T PRK08175 299 RRDVLVKGLHEAGWMVEMPK-------------------ASMYVWAKIPEPYAAMGSLEFAKKL 343 (395)
T ss_pred HHHHHHHHHHHcCCcccCCC-------------------EEEEEEEECCcccCCCCHHHHHHHH
Confidence 88999999988765443332 5779999998431 245566554
No 152
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.7e-25 Score=222.62 Aligned_cols=244 Identities=14% Similarity=0.157 Sum_probs=171.7
Q ss_pred hhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 99 PTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
+....|++.||+.++. +++++|+| +++++++++++++++||.|++++|+|..+..... ..|..+..++.+
T Consensus 65 ~~~~~lr~~ia~~~~~~~~~I~it~G---~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~-----~~g~~~~~~~l~ 136 (357)
T PRK14809 65 ASHADLTAALADRWDVSPEQVWLANG---GDGALDYLARAMLDPGDTVLVPDPGFAYYGMSAR-----YHHGEVREYPVS 136 (357)
T ss_pred CCHHHHHHHHHHHhCCCcceEEECCC---HHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHH-----HcCCeEEEEecc
Confidence 3467899999999874 56899999 9999999999999999999999999987765543 245555555432
Q ss_pred -------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc--CCEEEEeCCCCCCCCCcc------CCCCe
Q 013079 177 -------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSPLVLSPA------RLGAD 241 (450)
Q Consensus 177 -------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~~~~~~~------~~g~d 241 (450)
|++++.+.. +++++|++++||||||.+.+.+++.++++.. ++++|+||+|..+...+. ..+..
T Consensus 137 ~~~~~~~~~~~~~~~~--~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~v 214 (357)
T PRK14809 137 KADDFEQTADTVLDAY--DGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDV 214 (357)
T ss_pred cCcCCCcCHHHHHHhh--cCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCE
Confidence 455665544 3689999999999999999987777776643 789999999966543221 12467
Q ss_pred EEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMK 321 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~ 321 (450)
+++.|+||.+|++|+|+ ||+++++++++.+..... ....+.+.+.++..++...+++....+.++++++.+.+.|.
T Consensus 215 i~~~SfSK~~~~~GlRi-G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 290 (357)
T PRK14809 215 AVLRTFSKAYGLAGLRL-GYAVVPEEWADAYARVNT---PFAASELACRAGLAALDDDEHVERTVETARWAREYIREELD 290 (357)
T ss_pred EEEecchhHhcCcchhh-eeeecCHHHHHHHHHhCC---CCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999 999999999888876543 12223333444444443333344445556777777777775
Q ss_pred hCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccc
Q 013079 322 KLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLG 386 (450)
Q Consensus 322 ~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G 386 (450)
.. ..| ..|.++++.+++ ...|.+.+... | +.+..|
T Consensus 291 ~~----~~~-------------------~~g~f~~~~~~~---~~~~~~~l~~~---g-v~v~~g 325 (357)
T PRK14809 291 AP----TWE-------------------SAGNFVLAEVGD---ASAVAEAAQER---G-VIVRDC 325 (357)
T ss_pred Cc----cCC-------------------CCCCEEEEECCC---HHHHHHHHHHC---C-EEEEEC
Confidence 42 112 146688988863 34566666542 3 455555
No 153
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=3e-25 Score=218.87 Aligned_cols=274 Identities=16% Similarity=0.104 Sum_probs=191.8
Q ss_pred CCCChhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 95 RHFNPTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
+|..+. .+|++.||+++|. +++++|+| +++++.++.. ++++|+ |++..|+|+.+...++ ..|.++.
T Consensus 50 ~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~G---s~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~-----~~g~~~~ 118 (339)
T PRK06959 50 RLPEDD-DGLAACAARYYGAPDAAHVLPVAG---SQAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFA-----RHGHRVV 118 (339)
T ss_pred hCCCch-HHHHHHHHHHhCCCCcccEEECcC---HHHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHH-----HCCCEEE
Confidence 455666 8999999999986 46899999 9999986654 567776 8889999999988875 3688888
Q ss_pred EeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHH---HHhcCCEEEEeCCCCCCCCCc--c---CCCCeEE
Q 013079 172 FVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRL---AHDKGVTVVVDNTFSPLVLSP--A---RLGADVV 243 (450)
Q Consensus 172 ~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~l---a~~~gi~livD~~~~~~~~~~--~---~~g~di~ 243 (450)
.++.++ + .+ .+.++++++++||||||.+.+.+++.++ |+++++++|+||+|..+...+ . .....++
T Consensus 119 ~v~~~~-~----~~-~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~ 192 (339)
T PRK06959 119 PLDEAA-D----TL-PAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVV 192 (339)
T ss_pred eecccc-h----hc-cccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEE
Confidence 877644 2 23 3456799999999999999886666555 567899999999996654211 1 1234689
Q ss_pred EeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC
Q 013079 244 VHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL 323 (450)
Q Consensus 244 ~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 323 (450)
+.|+||.+|.+|+|+ ||+++++++++.+...+.. ...+.+.+.++..++....+.....+++.++++++.+.|+++
T Consensus 193 l~SfSK~~gl~GlRi-Gy~v~~~~li~~l~~~~~~---~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 268 (339)
T PRK06959 193 LRSVGKFFGLAGVRA-GFVLAAPALLAALRDALGA---WTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH 268 (339)
T ss_pred EecChhhcCCcchhe-EEEecCHHHHHHHHHhcCC---CCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999 9999999999999876552 223344455555555443445555566788899999999987
Q ss_pred CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCC
Q 013079 324 GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSEL 403 (450)
Q Consensus 324 ~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~ 403 (450)
++.+. + .+.++++.+++ ...+.+.|... | +.+.. +
T Consensus 269 g~~~~-~--------------------~~~f~~~~~~~---~~~l~~~l~~~---G-I~vr~---~-------------- 303 (339)
T PRK06959 269 GFAVH-A--------------------TPLFSWTDDPR---AAALHAALARR---G-IWTRY---F-------------- 303 (339)
T ss_pred CCCcc-C--------------------cceEEEEeCCC---HHHHHHHHHhC---C-eEEEE---C--------------
Confidence 65432 1 13477887763 34566666642 3 33320 0
Q ss_pred CHHHHHhcCCCCCeEEEEe-CCCCCHHHHHHHHHHHHHHhh
Q 013079 404 NAEEKALAGISAGLVRMSV-GYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 404 ~~~~~~~~g~~~~~iRiS~-g~~~~~~~~i~~l~~al~~~~ 443 (450)
+ ..++||||+ |..++.+.+++.|.+.++.+.
T Consensus 304 --------~-~~~~lRisi~~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 304 --------A-PPPSVRFGLPADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred --------C-CCCeEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 0 135899999 522444556666665555443
No 154
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.95 E-value=2.6e-24 Score=216.17 Aligned_cols=311 Identities=16% Similarity=0.134 Sum_probs=214.3
Q ss_pred HHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchh
Q 013079 74 ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGG 153 (450)
Q Consensus 74 ~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~ 153 (450)
+++.+.+.. ++.+...+.+.+...+..+++++.++++++.+..+++++ |++++..++..++++||+|+++.+.|+.
T Consensus 60 ~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~---g~~~~~~~l~~~~~~gd~V~~~~~~~~~ 135 (385)
T PRK05958 60 AAAQQAARR-YGAGSGGSRLVTGNSPAHEALEEELAEWFGAERALLFSS---GYAANLAVLTALAGKGDLIVSDKLNHAS 135 (385)
T ss_pred HHHHHHHHh-cCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECc---HHHHHHHHHHHhCCCCCEEEEeCccCHH
Confidence 556655543 332222333334456788999999999999888888888 9999888888889999999999999999
Q ss_pred HHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcC--CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCC-
Q 013079 154 THALLTHFFPRACNITTTFVDISDHEMVNSAIVQG--RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSP- 230 (450)
Q Consensus 154 ~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~--~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~- 230 (450)
+...+. ..|.++..++..|++++++.+... +++++++++++|++|.+.++++|+++|+++|+++|+|++|+.
T Consensus 136 ~~~~~~-----~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g 210 (385)
T PRK05958 136 LIDGAR-----LSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTG 210 (385)
T ss_pred HHHHHH-----hcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECccccc
Confidence 887764 357788888878999999988322 467888889999999999999999999999999999999932
Q ss_pred -CCCC---------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHH-HHHccC
Q 013079 231 -LVLS---------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAF-ELSERI 299 (450)
Q Consensus 231 -~~~~---------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~-~~~~~~ 299 (450)
+... ......++++.|+||+++++| |+++.++++.+.+...........+..+.+.++. .++...
T Consensus 211 ~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~ 286 (385)
T PRK05958 211 VLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG----AAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRIL 286 (385)
T ss_pred ccCCCCCchHHhhCCCCCCceEEEEechhhcccCC----cEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH
Confidence 2211 111235688999999998754 8888888888776543321111122222232222 222222
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccc
Q 013079 300 PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFG 379 (450)
Q Consensus 300 ~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g 379 (450)
+......+++.++++++.+.|++.+.++.. +.|++++|.+++.....+|.+.|... |
T Consensus 287 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~l~~~---g 343 (385)
T PRK05958 287 RREPERRERLAALIARLRAGLRALGFQLMD--------------------SQSAIQPLIVGDNERALALAAALQEQ---G 343 (385)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHcCCCcCC--------------------CCCCEEEEEeCCHHHHHHHHHHHHHC---C
Confidence 222445567788889999999887654321 13568899988654566788887642 3
Q ss_pred ccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 380 FMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 380 ~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
+.++.+.. + . ....++.||||++ ...+++.++.+.++|.++
T Consensus 344 -I~v~~~~~------~-~-------------~~~~~~~lRis~~-~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 344 -FWVGAIRP------P-T-------------VPAGTSRLRITLT-AAHTEADIDRLLEALAEA 384 (385)
T ss_pred -ceEecccC------C-C-------------CCCCCceEEEEec-CCCCHHHHHHHHHHHHhc
Confidence 44443211 0 0 0011368999999 777788888887777653
No 155
>PRK07908 hypothetical protein; Provisional
Probab=99.94 E-value=2.5e-24 Score=213.50 Aligned_cols=272 Identities=16% Similarity=0.178 Sum_probs=188.6
Q ss_pred hHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-
Q 013079 100 TVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS- 176 (450)
Q Consensus 100 ~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~- 176 (450)
....+|+.||++++. +++++|+| +++++.+++. +.+| .+++..|+|..+...++ ..|.++..++.+
T Consensus 59 g~~~lr~aia~~~~~~~~~I~it~G---a~~al~~~~~--l~~~-~viv~~P~y~~~~~~~~-----~~G~~i~~v~~~~ 127 (349)
T PRK07908 59 DERRARAAVAARHGRTPDEVLLLAG---AAEGFALLAR--LRPR-RAAVVHPSFTEPEAALR-----AAGIPVHRVVLDP 127 (349)
T ss_pred chHHHHHHHHHHhCcChhhEEECCC---HHHHHHHHHh--cCCC-eEEEeCCCChHHHHHHH-----HcCCEEEeeccCc
Confidence 467899999999875 56899999 9999998887 4664 56778999998877664 368888877654
Q ss_pred ----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCC----Cc--cCCCCeEEEeC
Q 013079 177 ----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL----SP--ARLGADVVVHS 246 (450)
Q Consensus 177 ----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~----~~--~~~g~di~~~S 246 (450)
|++ .+ +++++++++++||||||.+.+.++|.++|++ +.++|+|++|..+.. +. ...+..+++.|
T Consensus 128 ~~~~d~~----~l-~~~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S 201 (349)
T PRK07908 128 PFRLDPA----AV-PDDADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRS 201 (349)
T ss_pred ccCcChh----Hh-ccCCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEee
Confidence 333 35 5678999999999999999999999999974 788999999854421 11 12245688899
Q ss_pred CCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013079 247 ISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 247 ~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
+||.++++|+|+ ||++.++++++.+...... ...+.+.+.++..... ..+++....+++.++++.+.+.|++++
T Consensus 202 ~SK~~~l~GlRi-G~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 277 (349)
T PRK07908 202 LTKTWSLAGLRV-GYALGAPDVLARLTRGRAH---WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVG 277 (349)
T ss_pred cccccCCcccee-eeeecCHHHHHHHHhcCCC---CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999998 9999999999888765441 1112222222222222 123455556667888899999998875
Q ss_pred CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCC
Q 013079 325 LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELN 404 (450)
Q Consensus 325 ~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~ 404 (450)
..+..|. .|.++|+.+++. ..+...+... | +.+..|....
T Consensus 278 ~~~~~p~-------------------~g~~~~~~~~~~---~~~~~~l~~~---g-I~v~~g~~f~-------------- 317 (349)
T PRK07908 278 ARVVDPA-------------------AAPFVLVRVPDA---ELLRKRLRER---G-IAVRRGDTFP-------------- 317 (349)
T ss_pred cEeccCC-------------------CceEEEEECCcH---HHHHHHHHhC---C-EEEEECCCCC--------------
Confidence 5544332 477999999852 3455555432 2 5555553210
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013079 405 AEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 405 ~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 439 (450)
+..+++||||++..++.+.+++.|.+.+
T Consensus 318 -------~~~~~~vRis~~~~~~~~~l~~al~~~~ 345 (349)
T PRK07908 318 -------GLDPDYLRLAVRPRAEVPVLVQALAEIL 345 (349)
T ss_pred -------CCCCCeEEEEeCCCccHHHHHHHHHHHH
Confidence 1125789999993345555555555443
No 156
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.94 E-value=2.2e-25 Score=225.76 Aligned_cols=251 Identities=11% Similarity=0.116 Sum_probs=168.3
Q ss_pred ccccCCCChhHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhC
Q 013079 91 FIYSRHFNPTVLNLSRQMAALE--------GTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFF 162 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~--------g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~ 162 (450)
+.|+ ..+....||+.||+++ ..+++++|+| +++++.+++ .++.+||+|++++|+|+.+...+..
T Consensus 70 ~~Y~--~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~G---a~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~-- 141 (409)
T PRK07590 70 RGYG--PEQGYDFLREKIAENDYQARGCDISADEIFISDG---AKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVM-- 141 (409)
T ss_pred cCCC--CCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCC---HHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHH--
Confidence 4454 3344567888888764 2467899999 999999854 5678999999999999999887752
Q ss_pred CCccCee-----------EEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCC
Q 013079 163 PRACNIT-----------TTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 163 ~~~~g~~-----------v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~ 228 (450)
.|.+ +..++.+.-+.+...+..+++++|++++||||||.+.+ +++|+++|+++|+++|+||+|
T Consensus 142 ---~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y 218 (409)
T PRK07590 142 ---AGRTGEANEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAY 218 (409)
T ss_pred ---cCCcccccccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccc
Confidence 4543 66666531112222232367999999999999999976 667888899999999999999
Q ss_pred CCCCCCc------cCC----CCeEEEeCCCCccccCccceEEEEEcCHHHHHHH-----------HHHhhhhhhccCCCc
Q 013079 229 SPLVLSP------ARL----GADVVVHSISKFISGGADIIAGAVCGPANLVNSM-----------MDLHQGALMLLGPTM 287 (450)
Q Consensus 229 ~~~~~~~------~~~----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l-----------~~~~~~~~~~~g~~~ 287 (450)
..+.++. ..+ +..++++|+||.+|.+|+|+ ||+++++++++.+ ............+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRi-G~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 297 (409)
T PRK07590 219 EAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRC-AYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYI 297 (409)
T ss_pred hhhccCCCCCcchhhCCCcccceEEEecCccccCCcCcee-EEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHH
Confidence 6554321 111 24688999999999999999 9999999888632 111110000112334
Q ss_pred hHHHHHHHHcc--CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHH
Q 013079 288 NPKVAFELSER--IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKA 365 (450)
Q Consensus 288 ~~~~a~~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~ 365 (450)
.+.++..++.. ..++....+.+.++++.+.+.|++++..+..|. .|.++|+.++.....
T Consensus 298 ~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-------------------g~~f~wi~~~~~~~~ 358 (409)
T PRK07590 298 VQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAGFEVYGGV-------------------NAPYIWVKTPDGMSS 358 (409)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCC-------------------cceEEEEECCCCCCH
Confidence 44444343432 234455556678889999999998765443221 466899999843223
Q ss_pred HHHHHHh
Q 013079 366 NRLMNYL 372 (450)
Q Consensus 366 ~~~~~~l 372 (450)
..|...+
T Consensus 359 ~~~~~~l 365 (409)
T PRK07590 359 WDFFDKL 365 (409)
T ss_pred HHHHHHH
Confidence 4555544
No 157
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=7.1e-25 Score=215.94 Aligned_cols=239 Identities=16% Similarity=0.183 Sum_probs=176.0
Q ss_pred CCChhHHHHHHHHHHHhC-----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 96 HFNPTVLNLSRQMAALEG-----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g-----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
+..+...+|++.||++++ .+++++|+| +++++.+++.++ |.|++.+|+|+.+...+. ..|.++
T Consensus 53 Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~G---a~~~i~~~~~~~----d~v~v~~P~y~~~~~~~~-----~~g~~~ 120 (335)
T PRK14808 53 YYDSPDEELIEKILSYLDTDFLSKNNVSVGNG---ADEIIYVMMLMF----DRSVFFPPTYSCYRIFAK-----AVGAKF 120 (335)
T ss_pred CCCCChHHHHHHHHHHhCCCCCCcceEEEcCC---HHHHHHHHHHHh----CcEEECCCCHHHHHHHHH-----HcCCeE
Confidence 334457789999999987 467899999 999999999876 679999999999998885 368888
Q ss_pred EEeCCCCHHHH-HHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCC-Cc---c-CCCCeEEE
Q 013079 171 TFVDISDHEMV-NSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL-SP---A-RLGADVVV 244 (450)
Q Consensus 171 ~~v~~~d~~~l-~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~-~~---~-~~g~di~~ 244 (450)
..++.++--.+ ...+ .++++|++++||||||.+.+.+++.+++ ++++++|+||+|..+.. .. . .....+++
T Consensus 121 ~~v~~~~~~~~~~~~~--~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~ 197 (335)
T PRK14808 121 LEVPLTKDLRIPEVNV--GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVI 197 (335)
T ss_pred EEecCCCcCCCChhHc--cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEE
Confidence 88876421001 1113 3578999999999999999999999998 57999999999965531 11 1 12467999
Q ss_pred eCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013079 245 HSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 245 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
.|+||.++.+|+|+ ||+++++++++.+...+.. ...+.+.+.++..++...++..+..+.+.++++.+.+.|++++
T Consensus 198 ~S~SK~~~l~GlRv-G~~v~~~~~~~~l~~~~~~---~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g 273 (335)
T PRK14808 198 RTFSKAFSLAAQRI-GYVVSSEKFIDAYNRVRLP---FNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG 273 (335)
T ss_pred EechhhccCcccce-EEEEeCHHHHHHHHHhcCC---CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999 9999999999988765531 2233444555544444334455556666777888999998877
Q ss_pred CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 325 LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 325 ~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
..+..| .|+++++.++..+ ...+.+.+..
T Consensus 274 ~~~~~~--------------------~g~f~~~~l~~~~-~~~~~~~l~~ 302 (335)
T PRK14808 274 YRITDS--------------------RGNFVFIFMEKEE-KERLLEHLRA 302 (335)
T ss_pred CEECCC--------------------CCeEEEEeCCCcc-HHHHHHHHHH
Confidence 554322 3668999987433 3566776664
No 158
>PRK06855 aminotransferase; Validated
Probab=99.94 E-value=1.4e-24 Score=221.11 Aligned_cols=231 Identities=16% Similarity=0.157 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHh----C----CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 101 VLNLSRQMAALE----G----TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
..+||+.||+++ | ++++++|+| +++|+.+++. ++.+||.|++.+|.|+.+...... ..|.++..
T Consensus 75 ~~~LReaia~~~~~~~g~~~~~~~I~it~G---~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~----~~g~~~v~ 146 (433)
T PRK06855 75 VLETREFLAELNNKRGGAQITPDDIIFFNG---LGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAA----HAGYPPVT 146 (433)
T ss_pred CHHHHHHHHHHHHhccCCCCCHhHEEEcCc---HHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHH----hcCCeEEE
Confidence 455666666664 3 356899999 9999999885 789999999999999986543211 13555554
Q ss_pred eCC-------CCHHHHHHhhhc-CCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc------
Q 013079 173 VDI-------SDHEMVNSAIVQ-GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP------ 235 (450)
Q Consensus 173 v~~-------~d~~~l~~ai~~-~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~------ 235 (450)
++. .|+++|++++.. ++++++++++||||||.+.+ +++|+++|+++|+++|+|++|..+.++.
T Consensus 147 v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl 226 (433)
T PRK06855 147 YRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPL 226 (433)
T ss_pred EecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCH
Confidence 432 278999998832 46899999999999999976 6678888999999999999996664321
Q ss_pred cCC---CCeEEEeCCCCccccCccceEEEEEcC-----HH---HHHHHHHHhhhhhhccCCCchHHHHHHHHccC---Cc
Q 013079 236 ARL---GADVVVHSISKFISGGADIIAGAVCGP-----AN---LVNSMMDLHQGALMLLGPTMNPKVAFELSERI---PH 301 (450)
Q Consensus 236 ~~~---g~di~~~S~sK~~g~~g~~igG~l~~~-----~~---~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~---~~ 301 (450)
..+ +..+++.|+||.++++|+|+ ||++.+ +. +++.+..... .....+.+.+.++..++... ++
T Consensus 227 ~~~~~~~~~I~~~S~SK~~~~pGlRi-G~ii~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Q~a~~~~l~~~~~~~~ 303 (433)
T PRK06855 227 SEVIGDVPGIALKGISKELPWPGSRC-GWIEVYNADKDEVFKKYINSILNAKM--IEVCSTTLPQMAIPRIMSHPEYKNY 303 (433)
T ss_pred HHHcCcCCeEEEecCccccCCCcceE-EEEEEeCCchhhHHHHHHHHHHHhhc--cccCCChHHHHHHHHhhcCCcHHHH
Confidence 111 24589999999999999999 999862 22 2233322211 11233445555555454432 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013079 302 LGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 361 (450)
Q Consensus 302 l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 361 (450)
+.+..+.++++++.+.+.|++++ ..+..|. .|.++|+.++.
T Consensus 304 ~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~-------------------gg~~~w~~l~~ 345 (433)
T PRK06855 304 LKERNKRYEKRSNIAYEKLKDVPGLKVNRTN-------------------GAFYMTVVFED 345 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeccCCC-------------------eeEEEeecccc
Confidence 55556667888999999997763 2333232 46789998874
No 159
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.94 E-value=4.4e-25 Score=219.53 Aligned_cols=291 Identities=14% Similarity=0.119 Sum_probs=201.8
Q ss_pred ChhHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhH--HHHHHHhCCCccCeeEEE
Q 013079 98 NPTVLNLSRQMAALEGTE---AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGT--HALLTHFFPRACNITTTF 172 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~---~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~--~~~~~~~~~~~~g~~v~~ 172 (450)
....+++++.+++++|++ .+++|+| |++|+.+++.+++.+||+|+++.+.|.+. ...+. ..|.++.+
T Consensus 31 ~~~~~~~~~~la~~~g~~~~~~~~~~~~---~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~-----~~g~~~~~ 102 (356)
T cd06451 31 LALMDEILEGLRYVFQTENGLTFLLSGS---GTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAE-----RYGADVDV 102 (356)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEecC---cHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHH-----HhCCCeEE
Confidence 355789999999999973 2678999 99999999999999999999998887763 22222 25778877
Q ss_pred eCCC-----CHHHHHHhhhcC-CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEE
Q 013079 173 VDIS-----DHEMVNSAIVQG-RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVV 244 (450)
Q Consensus 173 v~~~-----d~~~l~~ai~~~-~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~ 244 (450)
++.+ |++++++++ ++ ++++|++++++||+|.+.|+++|.++|+++|+++++|++| +....+....++|+++
T Consensus 103 v~~~~~~~~~~~~l~~~i-~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~ 181 (356)
T cd06451 103 VEKPWGEAVSPEEIAEAL-EQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAY 181 (356)
T ss_pred eecCCCCCCCHHHHHHHH-hccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEE
Confidence 7643 789999999 65 8999999999999999999999999999999999999987 4444555566899999
Q ss_pred eCCCCccccCccceEEEEEcCHHHHHHHHH--Hhhhh-------------hhccCCCchHH--HH-HHHHcc--CCcHHH
Q 013079 245 HSISKFISGGADIIAGAVCGPANLVNSMMD--LHQGA-------------LMLLGPTMNPK--VA-FELSER--IPHLGL 304 (450)
Q Consensus 245 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~--~~~~~-------------~~~~g~~~~~~--~a-~~~~~~--~~~l~~ 304 (450)
.|+||+++++.. + |+++.++++++.+.. ...++ .....++++.. .+ ..++.. ...+..
T Consensus 182 ~s~~K~l~~p~g-~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~ 259 (356)
T cd06451 182 TGSQKALGAPPG-L-GPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLEN 259 (356)
T ss_pred ecCchhccCCCC-c-ceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHH
Confidence 999999997632 4 999888888776653 00000 00111222221 11 111111 122344
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccc
Q 013079 305 RMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVS 384 (450)
Q Consensus 305 ~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs 384 (450)
..++..++++++.+.|++.+..+..+. . . ..+.++++.++.......+.+.|... +| +.++
T Consensus 260 ~~~~~~~~~~~l~~~L~~~g~~~~~~~--~--~------------~~~~~~~~~~~~~~~~~~~~~~L~~~--~g-I~~~ 320 (356)
T cd06451 260 RWARHRRLAKALREGLEALGLKLLAKP--E--L------------RSPTVTAVLVPEGVDGDEVVRRLMKR--YN-IEIA 320 (356)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeeccCc--c--c------------CCCceEEEECCCCCCHHHHHHHHHHh--CC-EEEe
Confidence 556667888899999988776554321 0 0 12335567666332355677777642 23 3444
Q ss_pred cccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 385 LGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 385 ~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.|..+ ..++.||+|++ ..++++.++++.++|.++
T Consensus 321 ~g~~~-----------------------~~~~~iRis~~-~~~~~e~v~~~~~~l~~~ 354 (356)
T cd06451 321 GGLGP-----------------------TAGKVFRIGHM-GEATREDVLGVLSALEEA 354 (356)
T ss_pred ccccc-----------------------ccCCEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 33210 01368999999 888899999999988765
No 160
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=6.7e-25 Score=216.43 Aligned_cols=212 Identities=15% Similarity=0.144 Sum_probs=159.4
Q ss_pred CCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 95 RHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
++..+....+|+.+|++++. +++++|+| +++++++++..+ +||+|+++.|.|+.+...+. ..|.++..
T Consensus 51 ~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G---~~~~l~~~~~~~--~gd~V~v~~P~y~~~~~~~~-----~~g~~~~~ 120 (337)
T PRK03967 51 RYPHITSDPLREAIAEFYGLDAENIAVGNG---SDELISYLVKLF--EGKHIVITPPTFGMYSFYAK-----LNGIPVID 120 (337)
T ss_pred cCCCCCHHHHHHHHHHHhCcCcceEEEcCC---HHHHHHHHHHHh--CCCeEEEeCCChHHHHHHHH-----HcCCeEEE
Confidence 33445678899999999984 56899999 999999887765 69999999999997766553 36778877
Q ss_pred eCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc----c-CCCCeE
Q 013079 173 VDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP----A-RLGADV 242 (450)
Q Consensus 173 v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~----~-~~g~di 242 (450)
++.+ |++.+++++ ++++++++++|+||||.+.+.++|.++++ +++++|+|++|..+.... . .....+
T Consensus 121 v~~~~~~~~d~~~l~~~~--~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi 197 (337)
T PRK03967 121 VPLKEDFTIDGERIAEKA--KNASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLI 197 (337)
T ss_pred eecCCCCCcCHHHHHHhc--cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEE
Confidence 7653 677887754 57889999999999999999999999995 799999999996553211 1 124578
Q ss_pred EEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013079 243 VVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 243 ~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
+++|+||.++.+|+|+ ||+++++++++.+...... ...+.+.+.++..++...+++.++.+...++++.+.+.|.+
T Consensus 198 ~l~S~SK~~~l~GlRi-G~iv~~~~~i~~~~~~~~~---~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 273 (337)
T PRK03967 198 LLRTFSKAFGLAGIRA-GYAIANEEIIDALYRIKPP---FSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGE 273 (337)
T ss_pred EEecchHhhcchhhhh-eeeecCHHHHHHHHhhcCC---CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999998 9999999999888776541 12233444444444433344445555666777778888765
Q ss_pred C
Q 013079 323 L 323 (450)
Q Consensus 323 ~ 323 (450)
+
T Consensus 274 ~ 274 (337)
T PRK03967 274 Y 274 (337)
T ss_pred C
Confidence 3
No 161
>PRK05839 hypothetical protein; Provisional
Probab=99.94 E-value=1.1e-24 Score=217.87 Aligned_cols=264 Identities=14% Similarity=0.103 Sum_probs=176.2
Q ss_pred hHHHHHHHHHHHhC----CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 100 TVLNLSRQMAALEG----TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 100 ~~~~l~~~iA~l~g----~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
.++.+.+.+++..| .+++++|+| +++++..++..++ .+||.|+++.|.|+.+...+. ..|+++..+
T Consensus 65 lr~aia~~l~~~~g~~~~~~~I~it~G---~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-----~~g~~v~~v 136 (374)
T PRK05839 65 LREAQRGFFKRRFKIELKENELIPTFG---TREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAI-----ASRAKVLLM 136 (374)
T ss_pred HHHHHHHHHHHHhCCCCCcceEEEecC---cHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHH-----hcCCEEEEe
Confidence 34444444455444 467899999 9999998887764 478999999999999988775 368888887
Q ss_pred CCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-----cc----
Q 013079 174 DIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS-----PA---- 236 (450)
Q Consensus 174 ~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~-----~~---- 236 (450)
+.+ +++..+..+ +++++|++++||||||.+.+ +++|+++|+++|+++|+||+|..+..+ ..
T Consensus 137 ~~~~~~~~~~d~~~~~~--~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~ 214 (374)
T PRK05839 137 PLTKENDFTPSLNEKEL--QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASI 214 (374)
T ss_pred ecccccCCcCCcchhhh--ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhc
Confidence 653 122222223 46999999999999999976 667888899999999999998554321 01
Q ss_pred -----CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHH
Q 013079 237 -----RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCH 311 (450)
Q Consensus 237 -----~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~ 311 (450)
..+..+++.|+||.|+.+|+|+ ||+++++++++++....... ....+.+.+.++..++...+++....+++.+
T Consensus 215 ~~~~~~~~~vi~~~SfSK~~~~~GlRi-G~ii~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 292 (374)
T PRK05839 215 LVGNESFKNVLVINSISKRSSAPGLRS-GFIAGDASILKKYKAYRTYL-GCASPLPLQKAAAVAWLDDEHAEFFRNIYAK 292 (374)
T ss_pred ccCccccCcEEEEeccccccCCcccee-EEEecCHHHHHHHHHHHhhc-CCCCChHHHHHHHHHhccchHHHHHHHHHHH
Confidence 1246799999999999999999 99999999988887654411 1223344444444344344445555566677
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccccc
Q 013079 312 RALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETL 391 (450)
Q Consensus 312 ~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~ 391 (450)
+++.+.+.| +.. .| ..|.++|+.+++. ..|...+.. +.| +.+..|+....
T Consensus 293 ~~~~~~~~l---~~~--~p-------------------~gg~fi~~~~~~~---~~~~~~l~~--~~g-i~v~pg~~f~~ 342 (374)
T PRK05839 293 NLKLAREIL---GIT--IP-------------------PATFYVWLPVDND---EEFTKKLYQ--NEG-IKVLPGSFLGR 342 (374)
T ss_pred HHHHHHHhc---CCC--CC-------------------CeeEEEEEeCCCh---HHHHHHHHH--HCC-EEEeCchhhCC
Confidence 777666554 211 22 2577899998743 345555532 122 45554432100
Q ss_pred ccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC
Q 013079 392 MSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL 425 (450)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~ 425 (450)
.+..++++|||++ .
T Consensus 343 -------------------~~~~~~~iRis~~-~ 356 (374)
T PRK05839 343 -------------------NGIGKGYVRIALV-Y 356 (374)
T ss_pred -------------------CCCCCCeEEEEec-C
Confidence 0122589999999 6
No 162
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.94 E-value=1.5e-24 Score=216.11 Aligned_cols=274 Identities=13% Similarity=0.067 Sum_probs=187.8
Q ss_pred hhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 99 PTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
+....|++.||++++. +++++|+| +++++.+++..+. +||.|+++.|.|..+...+. ..|.++..++.+
T Consensus 57 ~~~~~Lr~aia~~~~v~~~~I~it~G---~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~-----~~g~~~~~v~~~ 127 (360)
T PRK07392 57 PDYRELRLALAQHHQLPPEWILPGNG---AAELLTWAGRELA-QLRAVYLITPAFGDYRRALR-----AFGATVKELPLP 127 (360)
T ss_pred cCHHHHHHHHHHHhCcChhhEEECCC---HHHHHHHHHHHhC-CCCeEEEECCCcHHHHHHHH-----HcCCeEEEEecc
Confidence 3456899999999865 56899999 9999999998764 68899999999999988875 357777776543
Q ss_pred ----------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc-----c----C
Q 013079 177 ----------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP-----A----R 237 (450)
Q Consensus 177 ----------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~-----~----~ 237 (450)
+++++++.. .+++++++++||||||.+.+.++|.++++++++ +|+||+|..+..+. . .
T Consensus 128 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~ 204 (360)
T PRK07392 128 LDQPSPGLTLRLQTLPPQL--TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAE 204 (360)
T ss_pred cccCCcccccCHHHHHHhc--cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhc
Confidence 344444432 468999999999999999999999999999985 66799996654321 1 1
Q ss_pred CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHH
Q 013079 238 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFA 317 (450)
Q Consensus 238 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~ 317 (450)
....+++.|+||.++.+|+|+ ||+++++++++.+...+.. ...+.+.+.++..++....+.....+.+.++++.+.
T Consensus 205 ~~~vi~i~S~SK~~~l~GlRi-G~~v~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 280 (360)
T PRK07392 205 YPNLIILRSLTKFYSLPGLRL-GYAIAHPDRLQRWQQWRDP---WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALF 280 (360)
T ss_pred CCCEEEEEechhhhcCCchhe-eeeeCCHHHHHHHHhhCCC---CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 135799999999999999999 9999999888887654431 222334444444444332333333345677888899
Q ss_pred HHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHh-hcccccccccccccccccccccc
Q 013079 318 RRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYL-QNYAQFGFMAVSLGYYETLMSCS 395 (450)
Q Consensus 318 ~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l-~~~~~~g~i~vs~G~~~s~~~~~ 395 (450)
+.|++++. .+ .|. .|.++++.++. ...++...+ .. .| +.+..|....
T Consensus 281 ~~L~~~~~~~~-~~~-------------------~~~fl~~~~~~--~~~~l~~~ll~~---~g-v~v~pg~~f~----- 329 (360)
T PRK07392 281 QGLASLPGLTP-LPS-------------------AANFLLVQSQG--SALQLQEKLLQQ---HR-ILIRDCLSFP----- 329 (360)
T ss_pred HHHHhCCCcEE-CCC-------------------CCCEEEEEcCC--CHHHHHHHHHhh---CC-EEEEeCCCCC-----
Confidence 99987633 32 222 46688888764 234565553 32 22 4555443210
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC-HHHHHHHHH
Q 013079 396 GSSTSSELNAEEKALAGISAGLVRMSVGYLGT-LDQRWSQFE 436 (450)
Q Consensus 396 ~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~-~~~~i~~l~ 436 (450)
+..+++||||++ ..+ .+++.+.|.
T Consensus 330 ----------------~~~~~~iRi~~~-~~~~~~~l~~al~ 354 (360)
T PRK07392 330 ----------------ELGDRYFRVAVR-TEAENQRLLEALA 354 (360)
T ss_pred ----------------CCCCCEEEEEeC-CHHHHHHHHHHHH
Confidence 112579999999 532 334444443
No 163
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.94 E-value=1.9e-24 Score=215.70 Aligned_cols=236 Identities=17% Similarity=0.185 Sum_probs=167.0
Q ss_pred HHHHHHHHHHh----C-----CCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 102 LNLSRQMAALE----G-----TEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 102 ~~l~~~iA~l~----g-----~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
.++++.+|+++ | .+++++|+| +++++..++..+ +++||+|++++|.|+.+...+. ..|.++.
T Consensus 65 ~~lr~~ia~~l~~~~~~~~~~~~~I~it~G---~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~~ 136 (364)
T PRK07865 65 PELREAIVGWLARRRGVTGLDPAAVLPVIG---SKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGAR-----LAGATVV 136 (364)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEEccC---hHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHH-----hcCCEEE
Confidence 34555555554 3 356899999 999999988777 7899999999999999887764 3687877
Q ss_pred EeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-----c-------
Q 013079 172 FVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-----A------- 236 (450)
Q Consensus 172 ~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-----~------- 236 (450)
.++ +++++. ..++++|++++||||||.+.+ +++|.++|+++|+++|+|++|..+.++. .
T Consensus 137 ~~~--~~~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 210 (364)
T PRK07865 137 RAD--SLTELG----PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGG 210 (364)
T ss_pred ecC--ChhhCC----cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCC
Confidence 764 444332 357899999999999999976 6788899999999999999985543321 1
Q ss_pred CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHH
Q 013079 237 RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIF 316 (450)
Q Consensus 237 ~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l 316 (450)
.....++++|+||.++.+|+|+ ||+++++++++.+...+... ....+.+.+.++..++...+++.+..+.+.++++.+
T Consensus 211 ~~~~~i~~~S~SK~~~~~GlRi-G~i~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l 288 (364)
T PRK07865 211 DHTGLLAVHSLSKQSNLAGYRA-GFVAGDPALVAELLEVRKHA-GMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVL 288 (364)
T ss_pred ccceEEEEeechhccCCCceee-EEEecCHHHHHHHHHHHHhc-CCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 1135699999999999999998 99999999998887655411 122233444444334433334555556678888999
Q ss_pred HHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 317 ARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 317 ~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
.+.|++++..+..|. .|.++|+.++.. ...+.+.+..
T Consensus 289 ~~~L~~~g~~~~~~~-------------------~~~~~~~~~~~~--~~~~~~~l~~ 325 (364)
T PRK07865 289 RPALEAAGFRVDHSE-------------------AGLYLWATRGED--CWDTVAWLAE 325 (364)
T ss_pred HHHHHHcCCcccCCC-------------------ccEEEEEeCCCC--HHHHHHHHHH
Confidence 999988765443332 345677777521 2345555543
No 164
>PLN02231 alanine transaminase
Probab=99.94 E-value=3.5e-24 Score=221.80 Aligned_cols=299 Identities=14% Similarity=0.093 Sum_probs=197.5
Q ss_pred CccccCCCChhHHHHHHHHHHHh----C----CCeEEEecChHHHHHHHHHHHHHhcc-CCCEEEEeCCCchhHHHHHHH
Q 013079 90 FFIYSRHFNPTVLNLSRQMAALE----G----TEAAYCTASDKAGMSAISSVLMQLCS-SGGHVVAARTLYGGTHALLTH 160 (450)
Q Consensus 90 ~~~y~r~~~~~~~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~~al~~l~~-~gd~Vi~~~~~y~~~~~~~~~ 160 (450)
.+.|+. ......+|+.||+++ | .+++++|+| +++|+.+++..++. +||.|+++.|.|+.+...+.
T Consensus 161 ~~~Y~~--s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~G---a~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~- 234 (534)
T PLN02231 161 TGAYSH--SQGIKGLRDAIAAGIEARDGFPADPNDIFLTDG---ASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIA- 234 (534)
T ss_pred ccCcCC--CCCcHHHHHHHHHHHHhccCCCCCcccEEEeCC---HHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHH-
Confidence 344553 233556777777765 3 367899999 99999999999884 79999999999999988875
Q ss_pred hCCCccCeeEEEeCCC-------CHHHHHHhhhcC------CceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEE
Q 013079 161 FFPRACNITTTFVDIS-------DHEMVNSAIVQG------RTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVV 224 (450)
Q Consensus 161 ~~~~~~g~~v~~v~~~-------d~~~l~~ai~~~------~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~liv 224 (450)
..|.++..++.+ |+++|++++ ++ ++++|++.+|+||||.+.+ +++|+++|+++|+++|+
T Consensus 235 ----~~g~~~v~~~l~~~~~~~~d~~~Le~~l-~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~ 309 (534)
T PLN02231 235 ----LHGGTLVPYYLDEATGWGLEISELKKQL-EDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLA 309 (534)
T ss_pred ----HcCCEEEEEecCcccCCCCCHHHHHHHH-HHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 256666665432 789999888 33 6899999999999999975 77899999999999999
Q ss_pred eCCCCCCCCCc-------cCC---------C-CeEEEeCCCCcc-ccCccceEEEEEc---CHHHHHHHHHHhhhhhhcc
Q 013079 225 DNTFSPLVLSP-------ARL---------G-ADVVVHSISKFI-SGGADIIAGAVCG---PANLVNSMMDLHQGALMLL 283 (450)
Q Consensus 225 D~~~~~~~~~~-------~~~---------g-~di~~~S~sK~~-g~~g~~igG~l~~---~~~~~~~l~~~~~~~~~~~ 283 (450)
||+|..+.++. ..+ + ..++++|+||.+ +.+|+|+ ||++. ++++++.+..... . ...
T Consensus 310 DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRi-Gy~~~~~~~~~l~~~l~k~~~-~-~~~ 386 (534)
T PLN02231 310 DEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFTSDVREQIYKVAS-V-NLC 386 (534)
T ss_pred EccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccce-EEEEEecCCHHHHHHHHHHHh-h-hcC
Confidence 99996654421 011 1 357889999965 7899998 99865 6788888876543 1 123
Q ss_pred CCCchHHHHHHHHccC----CcHH-------HHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCc
Q 013079 284 GPTMNPKVAFELSERI----PHLG-------LRMKEHCHRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGF 351 (450)
Q Consensus 284 g~~~~~~~a~~~~~~~----~~l~-------~~~~~~~~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~ 351 (450)
.+...+..+..++... ..+. ...+.+.++++.+.+.|+++ +..+..|. .
T Consensus 387 s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~-------------------G 447 (534)
T PLN02231 387 SNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAE-------------------G 447 (534)
T ss_pred CChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCC-------------------e
Confidence 3444455554444321 1221 12355788889999999887 34544332 4
Q ss_pred CcEEEEEe--CCH--HH--------HHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEE
Q 013079 352 GGLLCLDM--ETE--EK--------ANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVR 419 (450)
Q Consensus 352 g~~~~~~l--~~~--~~--------~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iR 419 (450)
|.++|..+ +.. +. ...+...|.. ..| +++..|+.+.- .-....+|
T Consensus 448 gfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~--~~G-V~vvPGs~Fg~--------------------~~g~~~~R 504 (534)
T PLN02231 448 AMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLN--ATG-IVVVPGSGFGQ--------------------VPGTWHFR 504 (534)
T ss_pred eeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHH--hcC-EEEeCCcccCC--------------------CCCCCeEE
Confidence 55666344 321 10 1123333321 123 56555533210 00135699
Q ss_pred EEeCCC--CCHHHHHHHHHHHHHHhhhc
Q 013079 420 MSVGYL--GTLDQRWSQFEKALSRMQDS 445 (450)
Q Consensus 420 iS~g~~--~~~~~~i~~l~~al~~~~~~ 445 (450)
++++ . +..++.+++|.+.++++.++
T Consensus 505 it~~-~~~e~l~eal~RL~~~~~~~~~~ 531 (534)
T PLN02231 505 CTIL-PQEDKIPAIVSRLTEFHKSFMDE 531 (534)
T ss_pred EEeC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 5 34556677787777776654
No 165
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.94 E-value=8.1e-25 Score=237.42 Aligned_cols=352 Identities=15% Similarity=0.083 Sum_probs=227.8
Q ss_pred ccCccccCC-HHHH-HHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC----eEEEecChHHHHHHHHHHHHHh
Q 013079 64 ASATFTVME-PETM-RRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE----AAYCTASDKAGMSAISSVLMQL 137 (450)
Q Consensus 64 ~att~~~~~-~~~~-~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~----~~~~tsg~~~gt~ai~~al~~l 137 (450)
+++|+..+. ++++ ..++...++||.+.|..++.....++++|+.+|+++|++ .++||+| +|+|+++++.++
T Consensus 41 Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsn---aT~alnlva~~l 117 (805)
T PLN02724 41 AGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSG---ATAALKLVGETF 117 (805)
T ss_pred CCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCC---hHHHHHHHHHHC
Confidence 445554433 4444 455567789998888788878888999999999999973 3699999 999999999887
Q ss_pred -ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-------------C--HHHHHHhhh---------cCCceE
Q 013079 138 -CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-------------D--HEMVNSAIV---------QGRTKV 192 (450)
Q Consensus 138 -~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-------------d--~~~l~~ai~---------~~~t~l 192 (450)
.++||+|+++..+|++....+ ....+ .|+++.+++.+ + .++|++.+. .++|++
T Consensus 118 ~~~~gd~Iv~t~~eH~svl~~~-~~a~~-~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~L 195 (805)
T PLN02724 118 PWSSESHFCYTLENHNSVLGIR-EYALE-KGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNL 195 (805)
T ss_pred CCCCCCeEEEeeccccchHHHH-HHHHH-cCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcce
Confidence 678999999999998887554 44344 68888888754 1 134554420 146789
Q ss_pred EEEecCCCCcccccCHHHHHHHHHhc--------CCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccc-cCccceEEE
Q 013079 193 LYFESISNPTLAVANIPELSRLAHDK--------GVTVVVDNTF--SPLVLSPARLGADVVVHSISKFIS-GGADIIAGA 261 (450)
Q Consensus 193 v~i~~~~NptG~v~~l~~I~~la~~~--------gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g-~~g~~igG~ 261 (450)
|.+.+.+|.||.++|+++|..+++.. ++++++|++| +...++..++++|+++.|+||++| |.| + |+
T Consensus 196 Va~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~-G~ 272 (805)
T PLN02724 196 FAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--L-GA 272 (805)
T ss_pred EEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--c-eE
Confidence 99999999999999999876555532 3689999998 677778788899999999999999 556 5 88
Q ss_pred EEcCHHHHHHHHHHhhhh--------------------hhccCCCchHHHHHHHHccCCc-----HHHHHHHHHHHHHHH
Q 013079 262 VCGPANLVNSMMDLHQGA--------------------LMLLGPTMNPKVAFELSERIPH-----LGLRMKEHCHRALIF 316 (450)
Q Consensus 262 l~~~~~~~~~l~~~~~~~--------------------~~~~g~~~~~~~a~~~~~~~~~-----l~~~~~~~~~~~~~l 316 (450)
++.++++.+.+.....++ ...-.++++......+..+++. +....++..++.+++
T Consensus 273 L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l 352 (805)
T PLN02724 273 LLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYV 352 (805)
T ss_pred EEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 887777665553221111 0011222222222121122222 233334457788889
Q ss_pred HHHHHhCC-------CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHH---HHHHHHHHh-hcccccccccccc
Q 013079 317 ARRMKKLG-------LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEE---KANRLMNYL-QNYAQFGFMAVSL 385 (450)
Q Consensus 317 ~~~L~~~~-------~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~---~~~~~~~~l-~~~~~~g~i~vs~ 385 (450)
.+.|++++ .++..+.... + +....+++++|.+.+.+ .....+..+ .. +| |.+..
T Consensus 353 ~~~L~~l~~~~g~~~v~iyg~~~~~-~----------~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~---~g-I~vR~ 417 (805)
T PLN02724 353 ANSLRNLKHGNGAPVCVLYGNHTFK-L----------EFHIQGPIVTFNLKRADGSWVGHREVEKLASL---SG-IQLRT 417 (805)
T ss_pred HHHHHhccCCCCCeEEEEcCCCCCC-C----------CcccccCEEEEEEEcCCCCEeCHHHHHHHHHh---cC-cEEee
Confidence 99998764 2343332000 0 00135789999987421 101112222 22 33 78888
Q ss_pred ccccccccccccccCCCCCHHHH---------------HhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 386 GYYETLMSCSGSSTSSELNAEEK---------------ALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 386 G~~~s~~~~~~~~~~~~~~~~~~---------------~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
|..|.-..+. .+..+..+.. ...+...+.||+|+| ..++.++++.|.++|++.
T Consensus 418 G~~Ca~~~~~---~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g-~ynt~eDvd~lv~~l~~~ 485 (805)
T PLN02724 418 GCFCNPGACA---KYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFG-YMSTFEDCQKFIDFIISS 485 (805)
T ss_pred ccccCchHHH---HHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcC-ccCCHHHHHHHHHHHHHH
Confidence 9777532211 1111111111 001223489999999 999999999999999873
No 166
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=7e-24 Score=214.88 Aligned_cols=293 Identities=15% Similarity=0.152 Sum_probs=201.5
Q ss_pred hhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc--CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 99 PTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
+...+|+++||+++|.+..+++++ |++|+..++..+.. +|+.|++....|.++...+. ..|.++..++.+
T Consensus 91 ~~~~~Le~~la~~~g~~~~i~~~s---G~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~-----~~g~~~~~~~~~ 162 (410)
T PRK13392 91 HPHVLLERELADLHGKESALLFTS---GYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIR-----RSGAEKQVFRHN 162 (410)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECc---HHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHH-----HcCCeEEEEeCC
Confidence 357899999999999888899999 99999988887754 78888887777877766553 257777777666
Q ss_pred CHHHHHHhhh---cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC-CC-CCCc--------cCCCCeEE
Q 013079 177 DHEMVNSAIV---QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PL-VLSP--------ARLGADVV 243 (450)
Q Consensus 177 d~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~-~~~~--------~~~g~di~ 243 (450)
|.+++++.+. .+++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+ ++ .... ..-..|++
T Consensus 163 d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div 242 (410)
T PRK13392 163 DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMI 242 (410)
T ss_pred CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEE
Confidence 7777766652 2578999999999999999999999999999999999999984 32 1110 01146899
Q ss_pred EeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCC-chHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013079 244 VHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPT-MNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 244 ~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~-~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
++|+||.+|++| ||+++++++++.++....++....+.. +.+.++..++...+......+++.++++++.+.|++
T Consensus 243 ~~tlsK~~g~~G----G~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~ 318 (410)
T PRK13392 243 QGTLAKAFGCLG----GYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNA 318 (410)
T ss_pred EEEChHhhhccc----chhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999764 888889889888876654321111111 222333334444444444556678888999999988
Q ss_pred CCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCC
Q 013079 323 LGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSE 402 (450)
Q Consensus 323 ~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~ 402 (450)
.+..+. |. .++++.+.++.......+.+.|.. ..| +.++.+.. |..
T Consensus 319 ~g~~~~-~~-------------------~~~~~~i~~~~~~~~~~~~~~L~~--~~G-I~v~~~~~------p~~----- 364 (410)
T PRK13392 319 NGIPVM-PS-------------------PSHIVPVMVGDPTLCKAISDRLMS--EHG-IYIQPINY------PTV----- 364 (410)
T ss_pred cCCCCC-CC-------------------CCCEEEEEeCCHHHHHHHHHHHHH--hCC-EEEeeeCC------CCC-----
Confidence 765432 21 244666777654445677776642 123 44433211 110
Q ss_pred CCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhcCC
Q 013079 403 LNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDSGV 447 (450)
Q Consensus 403 ~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~~~ 447 (450)
......||||+. ...+++.++.+.++|.++.+..+
T Consensus 365 ---------~~~~~~lRis~~-~~~t~edid~l~~aL~~~~~~~~ 399 (410)
T PRK13392 365 ---------PRGTERLRITPT-PLHDDEDIDALVAALVAIWDRLE 399 (410)
T ss_pred ---------CCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHcC
Confidence 011368999998 77777888888888887655433
No 167
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=3.4e-24 Score=213.22 Aligned_cols=223 Identities=18% Similarity=0.156 Sum_probs=159.5
Q ss_pred CeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEE
Q 013079 115 EAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVL 193 (450)
Q Consensus 115 ~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv 193 (450)
+++++|+| +++++..++..+ +++||.|++++|+|+++...+. ..|.++..++ +++. +..+++++|
T Consensus 81 ~~I~it~G---~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~~~v~--~~~~----l~~~~~~~v 146 (357)
T TIGR03539 81 TAVLPVIG---TKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGAL-----LAGATPVAAD--DPTE----LDPVGPDLI 146 (357)
T ss_pred CeEEEccC---hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHH-----hcCCEEeccC--Chhh----cCccCccEE
Confidence 67899999 999999988877 6999999999999998887664 3677777664 4443 324579999
Q ss_pred EEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc--c----------CCCCeEEEeCCCCccccCccce
Q 013079 194 YFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP--A----------RLGADVVVHSISKFISGGADII 258 (450)
Q Consensus 194 ~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~--~----------~~g~di~~~S~sK~~g~~g~~i 258 (450)
++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.++. . .....++++|+||.++++|+|+
T Consensus 147 ~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~ 226 (357)
T TIGR03539 147 WLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRA 226 (357)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeE
Confidence 99999999999976 6679999999999999999985443221 1 1124699999999999999998
Q ss_pred EEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchh
Q 013079 259 AGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHH 338 (450)
Q Consensus 259 gG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~ 338 (450)
||+++++++++.+...+... ....+.+.+.++..++....++....+.+.++++.+.+.|++.+..+..|.
T Consensus 227 -G~~i~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~------- 297 (357)
T TIGR03539 227 -GFVAGDPALVAELLTVRKHA-GLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAGFRIDHSE------- 297 (357)
T ss_pred -EEEecCHHHHHHHHHHHhhc-ccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCC-------
Confidence 99999999998887665421 122333344444333333233444455677888889999988765443332
Q ss_pred HHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 339 ELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 339 ~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
.|.++++.++. ....+...|..
T Consensus 298 ------------~~~~~~~~~~~--~~~~~~~~l~~ 319 (357)
T TIGR03539 298 ------------AGLYLWATRGE--DAWDTVDRLAE 319 (357)
T ss_pred ------------ccEEEEEECCC--CHHHHHHHHHh
Confidence 34577887753 23456666654
No 168
>PLN02483 serine palmitoyltransferase
Probab=99.94 E-value=1.8e-23 Score=215.04 Aligned_cols=291 Identities=13% Similarity=0.152 Sum_probs=202.3
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
..+..+++|+.||+++|.+..+++++ |+.++..++.+++++||+|++.++.|.++...+. ..|.++..++.+
T Consensus 144 ~~~~~~ele~~lA~~~g~~~ai~~~~---G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~-----~~Ga~v~~~~~~ 215 (489)
T PLN02483 144 TTKLHRELEELVARFVGKPAAIVFGM---GYATNSTIIPALIGKGGLIISDSLNHNSIVNGAR-----GSGATIRVFQHN 215 (489)
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEECC---HHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHH-----HcCCeEEEEeCC
Confidence 36788999999999999988888888 9998888888899999999999999999887764 368899888888
Q ss_pred CHHHHHHhhhc------CCc-----e-EEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCC--CCC---------
Q 013079 177 DHEMVNSAIVQ------GRT-----K-VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSP--LVL--------- 233 (450)
Q Consensus 177 d~~~l~~ai~~------~~t-----~-lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~--~~~--------- 233 (450)
|++++++.+++ ++| + +|+++.+.|++|.+.++++|+++|+++|+++++||+|+- +..
T Consensus 216 d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~ 295 (489)
T PLN02483 216 TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELL 295 (489)
T ss_pred CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhc
Confidence 88888776621 222 4 666778889999999999999999999999999999831 111
Q ss_pred CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCC-C-chHHHHHHHHc---c---CCcHHHH
Q 013079 234 SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGP-T-MNPKVAFELSE---R---IPHLGLR 305 (450)
Q Consensus 234 ~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~-~-~~~~~a~~~~~---~---~~~l~~~ 305 (450)
.....++|++++|+||.+|+.| ||+++++++++.+........ ..+. . +....+..++. . .+...++
T Consensus 296 ~v~~~~~dI~~~SfSKs~g~~G----G~i~~~~~li~~l~~~~~~~~-~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~ 370 (489)
T PLN02483 296 GVDPADVDIMMGTFTKSFGSCG----GYIAGSKELIQYLKRTCPAHL-YATSMSPPAVQQVISAIKVILGEDGTNRGAQK 370 (489)
T ss_pred CCCcccCcEEEEecchhcccCc----eEEEcCHHHHHHHHHhCcccc-ccCCcCHHHHHHHHHHHHHHHhCccccchHHH
Confidence 1111257999999999999764 999999999998876533111 1111 1 11111212221 1 1233456
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccc
Q 013079 306 MKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSL 385 (450)
Q Consensus 306 ~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~ 385 (450)
.++++++++++.+.|+++++.+..+. .++++++.+........|.+.|... | +.+..
T Consensus 371 ~~~l~~~~~~l~~~L~~~G~~v~~~~-------------------~sp~~~l~l~~~~~~~~~~~~Ll~~---G-I~v~~ 427 (489)
T PLN02483 371 LAQIRENSNFFRSELQKMGFEVLGDN-------------------DSPVMPIMLYNPAKIPAFSRECLKQ---N-VAVVV 427 (489)
T ss_pred HHHHHHHHHHHHHHHHHCCCcccCCC-------------------CCCEEEEEECCHHHHHHHHHHHHHC---C-cEEee
Confidence 67789999999999998876443221 2347777776544566777776642 3 34332
Q ss_pred ccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 386 GYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 386 G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
.+. |+. ....+.+||+++ ...+++.++.+.++|+++.+
T Consensus 428 ~~f------p~~--------------p~~~~~vRi~is-a~~t~edId~~l~~L~~~~~ 465 (489)
T PLN02483 428 VGF------PAT--------------PLLLARARICIS-ASHSREDLIKALEVISEVGD 465 (489)
T ss_pred eCC------CCC--------------CCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHH
Confidence 111 110 011367999999 76666666666666665533
No 169
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.94 E-value=4.7e-24 Score=215.52 Aligned_cols=245 Identities=14% Similarity=0.162 Sum_probs=165.6
Q ss_pred ChhHHHHHHHHHHHh---C--CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCe----
Q 013079 98 NPTVLNLSRQMAALE---G--TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI---- 168 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~---g--~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~---- 168 (450)
.+....+++.+|+++ + .+++++|+| +++++.++ ..++.+||+|++++|+|..+...+. ..|.
T Consensus 74 ~~g~~~lr~aia~~~~~~~~~~d~I~it~G---a~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~-----~~g~~~~~ 144 (402)
T TIGR03542 74 EQGYPFLREAIAENDYRGRIDPEEIFISDG---AKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDSNV-----MAGRAGVL 144 (402)
T ss_pred CCCCHHHHHHHHHHHHhcCCCHHHEEECCC---cHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHHH-----HcCCcccc
Confidence 345667888888864 2 467899999 99999985 4567889999999999999987775 2465
Q ss_pred -------eEEEeCCCCHHHHHHhh-hcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc--
Q 013079 169 -------TTTFVDISDHEMVNSAI-VQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP-- 235 (450)
Q Consensus 169 -------~v~~v~~~d~~~l~~ai-~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~-- 235 (450)
++.+++.+..+.+...+ ...++++|++++||||||.+.+ +++|+++|+++|+++|+|++|..+..+.
T Consensus 145 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~ 224 (402)
T TIGR03542 145 DDDGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSL 224 (402)
T ss_pred ccccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCC
Confidence 77776653211111112 1257899999999999999987 7789999999999999999996553221
Q ss_pred -c---CC----CCeEEEeCCCCccccCccceEEEEEcCHHHH--------HHHHHHhhhhhhcc-CCCchHHHHHHHHcc
Q 013079 236 -A---RL----GADVVVHSISKFISGGADIIAGAVCGPANLV--------NSMMDLHQGALMLL-GPTMNPKVAFELSER 298 (450)
Q Consensus 236 -~---~~----g~di~~~S~sK~~g~~g~~igG~l~~~~~~~--------~~l~~~~~~~~~~~-g~~~~~~~a~~~~~~ 298 (450)
. .+ +..++++|+||.+|.+|+|+ ||++++++++ ..+..... .... .+.+.+.++..++..
T Consensus 225 ~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRi-G~~i~~~~l~~~~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~ 301 (402)
T TIGR03542 225 PHSIFEIPGAKECAIEFRSFSKTAGFTGVRL-GWTVVPKELTYADGHSVIQDWERRQC--TKFNGASYPVQRAAEAAYAG 301 (402)
T ss_pred CcchhhCCCCcccEEEEecCccccCCCCcce-EEEEecHHHhhcchhhHHHHHHHHhh--hcccCCCHHHHHHHHHHHcC
Confidence 1 11 24688999999999999999 9999998876 22211111 0111 233444444333332
Q ss_pred --CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013079 299 --IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 373 (450)
Q Consensus 299 --~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~ 373 (450)
..++.+..+.+.++++.+.+.|++++..+..| ..|.++|+.++.......+...+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-------------------~~~~f~~v~l~~~~~~~~l~~~l~ 359 (402)
T TIGR03542 302 EGLQPILEAISYYMENARILRKALEAAGFKVYGG-------------------EHAPYLWVKTPEGISSWDFFDFLL 359 (402)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCceecCC-------------------CceeEEEEECCCCCCHHHHHHHHH
Confidence 22344445567888889999998876443322 146689999984322345665543
No 170
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.93 E-value=2e-24 Score=215.40 Aligned_cols=249 Identities=20% Similarity=0.255 Sum_probs=182.6
Q ss_pred ccccCCCChhHHHHHHHHHHHhC--------CC-eEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHHHHH
Q 013079 91 FIYSRHFNPTVLNLSRQMAALEG--------TE-AAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTH 160 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~g--------~~-~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~ 160 (450)
+.|+.. .....+++.||++++ .+ .+++++| ..+++..++..+ ..+||.|+++.|.|+.+...++
T Consensus 38 ~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G---~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~- 111 (363)
T PF00155_consen 38 LGYPPP--QGYPELREAIADFLGRRYGVPVDPEANILVTSG---AQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAAR- 111 (363)
T ss_dssp TSSTCT--THHHHHHHHHHHHHHHHHTHHTTGGEGEEEESH---HHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHH-
T ss_pred ccCCCc--hhhHHHHHHHHHHhhhccCcccccceEEEEecc---cccchhhhhhcccccccccceecCCcccccccccc-
Confidence 445532 347889999999988 56 6777777 777777777777 6789999999999999998886
Q ss_pred hCCCccCeeEEEeC-------CCCHHHHHHhhhcC------CceEEEEecCCCCcccccCHH---HHHHHHHhcCCEEEE
Q 013079 161 FFPRACNITTTFVD-------ISDHEMVNSAIVQG------RTKVLYFESISNPTLAVANIP---ELSRLAHDKGVTVVV 224 (450)
Q Consensus 161 ~~~~~~g~~v~~v~-------~~d~~~l~~ai~~~------~t~lv~i~~~~NptG~v~~l~---~I~~la~~~gi~liv 224 (450)
..|.++..++ ..|+++|++.+ ++ ++++|++++|+||||.+.+.+ +|+++|+++|+++|+
T Consensus 112 ----~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~ 186 (363)
T PF00155_consen 112 ----LLGAEVIPVPLDSENDFHLDPEALEEAL-DELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIV 186 (363)
T ss_dssp ----HTTSEEEEEEEEETTTTEETHHHHHHHH-HTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEE
T ss_pred ----ccCceeeecccccccccccccccccccc-ccccccccccceeeecccccccccccccccccchhhhhcccccceee
Confidence 3577777776 23899999988 54 578999999999999997655 555559999999999
Q ss_pred eCCCCCCCCCcc---------CC-CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHH
Q 013079 225 DNTFSPLVLSPA---------RL-GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFE 294 (450)
Q Consensus 225 D~~~~~~~~~~~---------~~-g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~ 294 (450)
|++|..+.+... +. ...+++.|+||.+|.+|+|+ ||++.++++++.+....... ..+.+.+..+..
T Consensus 187 De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRv-G~i~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~ 262 (363)
T PF00155_consen 187 DEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRV-GYIVAPPELIERLRRFQRSG---LSSSPMQAAAAA 262 (363)
T ss_dssp EETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTE-EEEEEEHHHHHHHHHHHHHT---TSSHHHHHHHHH
T ss_pred eeceeccccCCCccCcccccccccccceeeeecccccccccccc-ccccchhhhhhhhhhccccc---cccchhhHHHHH
Confidence 999966544311 11 24699999999999999999 99988999998888766521 223333333333
Q ss_pred HHccCC----cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHH
Q 013079 295 LSERIP----HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMN 370 (450)
Q Consensus 295 ~~~~~~----~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~ 370 (450)
.+.... ++.++.+++.++++.+.+.|++.+..+..+. .|.++++.++.. +...|.+
T Consensus 263 ~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-------------------~~~~~~~~~~~~-~~~~l~~ 322 (363)
T PF00155_consen 263 ALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPE-------------------AGFFLWVRLDPN-DAEELAQ 322 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHS-------------------BSSEEEEEESHH-HHHHHHH
T ss_pred hhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeecc-------------------CccEEEEEcccc-hHHHHHH
Confidence 333222 5666777789999999999998877665432 455777777744 4566777
Q ss_pred Hhhc
Q 013079 371 YLQN 374 (450)
Q Consensus 371 ~l~~ 374 (450)
.|..
T Consensus 323 ~L~~ 326 (363)
T PF00155_consen 323 ELLE 326 (363)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6664
No 171
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.93 E-value=2.7e-23 Score=210.12 Aligned_cols=293 Identities=16% Similarity=0.159 Sum_probs=198.2
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc--CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
..+...+|++.||+++|.+.++++++ |++|+..++..+.. +++.|++....|.+....+. ..|.++..++
T Consensus 88 ~~~~~~~Le~~la~~~g~~~~l~~~s---G~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~-----~~g~~~~~~~ 159 (402)
T TIGR01821 88 TNIPHVELEAELADLHGKESALVFTS---GYVANDATLATLAKIIPGCVIFSDELNHASMIEGIR-----HSGAEKFIFR 159 (402)
T ss_pred CcHHHHHHHHHHHHHhCCCeEEEECc---hHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHH-----HcCCeEEEEC
Confidence 36778999999999999888999999 99999999987764 56666666556665555553 2566766666
Q ss_pred CCCHHHHHHhhhc---CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCC-----cc--C--CCCe
Q 013079 175 ISDHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLS-----PA--R--LGAD 241 (450)
Q Consensus 175 ~~d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~-----~~--~--~g~d 241 (450)
..|++++++.+.. +++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+ ++... .. . ...|
T Consensus 160 ~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~d 239 (402)
T TIGR01821 160 HNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRID 239 (402)
T ss_pred CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCe
Confidence 6788888887731 368999999999999999999999999999999999999983 22110 00 1 1368
Q ss_pred EEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCc-hHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTM-NPKVAFELSERIPHLGLRMKEHCHRALIFARRM 320 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L 320 (450)
++++|++|.+|+.| ||+++++++++.+.....+.....+..+ .+.++..++..++......++..++++++.+.|
T Consensus 240 iv~~t~sKa~g~~G----G~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L 315 (402)
T TIGR01821 240 IIEGTLAKAFGVVG----GYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLL 315 (402)
T ss_pred EEEEechhhhccCC----ceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999764 8999998888888654432211111222 222222333333333444455678888999999
Q ss_pred HhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccC
Q 013079 321 KKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTS 400 (450)
Q Consensus 321 ~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~ 400 (450)
++++.++..+ .++++.+.++....+..+.+.|.. +.| +.++... .|..
T Consensus 316 ~~~g~~~~~~--------------------~~~i~~i~~~~~~~a~~~~~~L~~--~~G-i~v~~~~------~p~~--- 363 (402)
T TIGR01821 316 EALGIPVIPN--------------------PSHIVPVIIGDAALCKKVSDLLLN--KHG-IYVQPIN------YPTV--- 363 (402)
T ss_pred HHcCCCcCCC--------------------CCCEEEEEeCCHHHHHHHHHHHHh--cCC-EEEEeEC------CCCC---
Confidence 8876543211 245778877654446677777642 123 3333211 1110
Q ss_pred CCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Q 013079 401 SELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDS 445 (450)
Q Consensus 401 ~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~ 445 (450)
......||||+. ...+++.++.+.++|+++.+.
T Consensus 364 -----------~~g~~~lRis~~-~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 364 -----------PRGTERLRITPT-PAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred -----------CCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence 011357999998 777777788887777766543
No 172
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=7.8e-24 Score=211.71 Aligned_cols=313 Identities=13% Similarity=0.112 Sum_probs=213.2
Q ss_pred ccCccccCC-HHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhcc-
Q 013079 64 ASATFTVME-PETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLCS- 139 (450)
Q Consensus 64 ~att~~~~~-~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~~- 139 (450)
.++|++.+. .+.+.+++...++++.. |. ......+++++.+|+++|.+ .+++|+| |++++..++..+..
T Consensus 27 ~~~~~~~~~~~~a~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~la~~~g~~~~~~~~~~g---gt~a~~~a~~~~~~~ 99 (371)
T PRK13520 27 SMCTEPHPIARKAHEMFLETNLGDPGL---FP-GTAKLEEEAVEMLGELLHLPDAYGYITSG---GTEANIQAVRAARNL 99 (371)
T ss_pred eeecCchHHHHHHHHHHHhcCCCCccc---Cc-cHHHHHHHHHHHHHHHhCCCCCCeEEecC---cHHHHHHHHHHHHhh
Confidence 336666666 47777777766666532 21 23344589999999999974 4689999 99999999877643
Q ss_pred ---CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHH
Q 013079 140 ---SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 211 (450)
Q Consensus 140 ---~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I 211 (450)
++++|++++++|.++...+. ..|+++..++.+ |+++|++++ ++++++|++.+++|+||.+.|+++|
T Consensus 100 ~~~~~~~vl~~~~~h~s~~~~~~-----~~g~~~~~v~~~~~~~~d~~~l~~~i-~~~~~~vi~~~~~~~tG~~~~l~~I 173 (371)
T PRK13520 100 AKAEKPNIVVPESAHFSFDKAAD-----MLGVELRRAPLDDDYRVDVKAVEDLI-DDNTIGIVGIAGTTELGQVDPIPEL 173 (371)
T ss_pred ccCCCceEEecCcchHHHHHHHH-----HcCceEEEecCCCCCcCCHHHHHHHH-hhCCEEEEEEcCCcCCcccCCHHHH
Confidence 47899999999998776653 257788887653 899999999 7778888888889999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCCCC---------CCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhh--
Q 013079 212 SRLAHDKGVTVVVDNTFSPLV---------LSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL-- 280 (450)
Q Consensus 212 ~~la~~~gi~livD~~~~~~~---------~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~-- 280 (450)
.++|+++|+++|+|++|+.+. ++....++|.++.|.||+.. .+.++|++++.++++++.+........
T Consensus 174 ~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~-a~~~~G~~~~~~~~~~~~l~~~~~~~~~~ 252 (371)
T PRK13520 174 SKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGL-APIPAGGILFRDESYLDALAVDTPYLTSK 252 (371)
T ss_pred HHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccC-ccCCceEEEEcCHHHHHhhcccCccccCC
Confidence 999999999999999984322 11122478999999999765 344564555677777766532111000
Q ss_pred ---hccC--CCchHHHHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCc
Q 013079 281 ---MLLG--PTMNPKVAFELSERI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGG 353 (450)
Q Consensus 281 ---~~~g--~~~~~~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~ 353 (450)
...| +......+..++..+ +.+.++.++..++++++.+.|++.++++..+. ..+
T Consensus 253 ~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-------------------~~~ 313 (371)
T PRK13520 253 KQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEP-------------------VLN 313 (371)
T ss_pred CCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCC-------------------Cce
Confidence 0011 111222233333222 23455667788889999999988876533221 233
Q ss_pred EEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHH
Q 013079 354 LLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWS 433 (450)
Q Consensus 354 ~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~ 433 (450)
++.|.+++ ...+.+.|... | +.++.+. .++.||||++ ..+++++++
T Consensus 314 ~v~~~~~~---~~~v~~~L~~~---g-i~v~~~~--------------------------~~~~iRis~~-~~~t~edi~ 359 (371)
T PRK13520 314 IVAFDDPN---PDEVREKLRER---G-WRVSVTR--------------------------CPEALRIVCM-PHVTREHIE 359 (371)
T ss_pred EEEEecCC---HHHHHHHHHHC---C-ceeccCC--------------------------CCCEEEEEEE-CCCCHHHHH
Confidence 78888874 34566666542 2 3443210 1357999999 788888899
Q ss_pred HHHHHHHHhh
Q 013079 434 QFEKALSRMQ 443 (450)
Q Consensus 434 ~l~~al~~~~ 443 (450)
.+.++|+++.
T Consensus 360 ~~~~~l~~~~ 369 (371)
T PRK13520 360 NFLEDLKEVK 369 (371)
T ss_pred HHHHHHHHHh
Confidence 9988887653
No 173
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.93 E-value=3e-23 Score=208.61 Aligned_cols=295 Identities=16% Similarity=0.121 Sum_probs=200.5
Q ss_pred ccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 91 FIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
|.+-+...+..+++++++++++|.+..+++++ |++++..++..++++||.|++..+.|+++...+. ..|.++
T Consensus 70 ~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~s---G~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~-----~~g~~~ 141 (385)
T TIGR01825 70 VRTIAGTLRLHEELEEKLAKFKKTEAALVFQS---GFNTNQGVLSALLRKGDIVLSDELNHASIIDGLR-----LTKATK 141 (385)
T ss_pred cCcccCCcHHHHHHHHHHHHHhCCCcEEEECc---HHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHH-----hcCCce
Confidence 44444456789999999999999877777788 8899998998899999999999999998876654 246677
Q ss_pred EEeCCCCHHHHHHhhhc---CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCC----------ccC
Q 013079 171 TFVDISDHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLS----------PAR 237 (450)
Q Consensus 171 ~~v~~~d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~----------~~~ 237 (450)
..++..|++++++.+.. +++++|++++++|+||.+.|+++|.++|+++|+++|+|++|..+.+. ...
T Consensus 142 ~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR01825 142 KIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE 221 (385)
T ss_pred EEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC
Confidence 77766788888887732 36899999999999999999999999999999999999999432111 112
Q ss_pred CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCch-HHHHHHHHccCCcHHHHHHHHHHHHHHH
Q 013079 238 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN-PKVAFELSERIPHLGLRMKEHCHRALIF 316 (450)
Q Consensus 238 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~-~~~a~~~~~~~~~l~~~~~~~~~~~~~l 316 (450)
.+.|+++.|+||+++++| ||+++++++++.+..............+. +.++..++..+....+..++..++++++
T Consensus 222 ~~~~i~~~s~sK~~~~~g----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l 297 (385)
T TIGR01825 222 DKVDIQVGTLSKAIGVVG----GYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFF 297 (385)
T ss_pred cCCcEEEEeccHHhhcCC----CEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 367899999999998654 89999988888876543211111111212 2222223322222223455667788999
Q ss_pred HHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccc
Q 013079 317 ARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSG 396 (450)
Q Consensus 317 ~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~ 396 (450)
.+.|++.+.++..|. ++++.+.++.......|...|... | +.++.+.. +.
T Consensus 298 ~~~L~~~g~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~L~~~---g-i~v~~~~~------~~ 347 (385)
T TIGR01825 298 KAGLGKLGYDTGGSE--------------------TPITPVVIGDEKAAQEFSRRLFDE---G-IFAQSIVF------PT 347 (385)
T ss_pred HHHHHHcCCCCCCCC--------------------CCEEEEEECCHHHHHHHHHHHHHC---C-cEEcccCC------CC
Confidence 999988765543221 236666666443456677776542 3 33331111 00
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 397 SSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 397 ~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
. ......||+++. ...+++.++.+.+++.++
T Consensus 348 ~--------------~~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~ 378 (385)
T TIGR01825 348 V--------------PRGTARIRNIPT-AEHTKDDLDQALDAYEKV 378 (385)
T ss_pred C--------------CCCCceEEEEEc-CCCCHHHHHHHHHHHHHH
Confidence 0 011367999998 656666666666666554
No 174
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=2.3e-23 Score=195.60 Aligned_cols=215 Identities=15% Similarity=0.187 Sum_probs=165.3
Q ss_pred ChhHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 98 NPTVLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
...+..+|+++|++++ ++.+++|+| .++||.+++.++.+||..|++++|.|+-+...+. ..|++
T Consensus 102 s~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsG---C~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~-----~~~lE 173 (447)
T KOG0259|consen 102 SVGILPARRAVAEYLNRDLPNKLTADDVVLTSG---CSQAIELAISSLANPGANILLPRPGFPLYDTRAI-----YSGLE 173 (447)
T ss_pred ccccHHHHHHHHHHhhcCCCCccCcCceEEecc---chHHHHHHHHHhcCCCCceecCCCCCchHHHhhh-----hcCce
Confidence 4456778899999854 567899999 9999999999999999999999999998876654 47899
Q ss_pred EEEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCcc---
Q 013079 170 TTFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSPA--- 236 (450)
Q Consensus 170 v~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~~--- 236 (450)
+++++.. |++.++..+ +++|.+++|.+|+||.|.+.. +++|+++|+++|+++|.||+|+++.+.-.
T Consensus 174 VR~ydlLPe~~weIDL~~veal~-DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfv 252 (447)
T KOG0259|consen 174 VRYYDLLPEKDWEIDLDGVEALA-DENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFV 252 (447)
T ss_pred eEeecccCcccceechHHHHHhh-ccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCcc
Confidence 9988753 899999988 999999999999999999965 88999999999999999999976654211
Q ss_pred ------CCCCeEEEeCCCCccccCccceEEEEEcCH--------HHHHHHHHHhhhhhhccCCCchHHHHH-HHHc-cC-
Q 013079 237 ------RLGADVVVHSISKFISGGADIIAGAVCGPA--------NLVNSMMDLHQGALMLLGPTMNPKVAF-ELSE-RI- 299 (450)
Q Consensus 237 ------~~g~di~~~S~sK~~g~~g~~igG~l~~~~--------~~~~~l~~~~~~~~~~~g~~~~~~~a~-~~~~-~~- 299 (450)
..-..+.++|.||.+-.||||+ ||++..+ ..++.+....+ ...++....++|. ..+. .-
T Consensus 253 pmg~fssiVPVitlggisKrW~VPGWRl-GWi~~hD~~gvf~~~~~~q~~~~~~~---~~~~p~TiiQ~AlP~IL~kTp~ 328 (447)
T KOG0259|consen 253 PMGKFSSIVPVITLGGISKRWIVPGWRL-GWIALHDPRGVFRDTKVVQGIKNFLD---IIPGPATIIQGALPDILEKTPE 328 (447)
T ss_pred chhhccccCceEeecccccccccCCcee-eeEEEecccccccchHHHHHHHHHHh---ccCCccHhHHHHhHHHHHhChH
Confidence 1136789999999999999999 9986431 23455555444 2334333333332 2222 22
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCC
Q 013079 300 PHLGLRMKEHCHRALIFARRMKKLGL 325 (450)
Q Consensus 300 ~~l~~~~~~~~~~~~~l~~~L~~~~~ 325 (450)
+.+..+..-++.+++...++|+++|.
T Consensus 329 efF~k~~~~lk~na~l~y~~Lk~IP~ 354 (447)
T KOG0259|consen 329 EFFDKKLSFLKSNADLCYSRLKDIPC 354 (447)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCC
Confidence 23455666678899999999998764
No 175
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.93 E-value=4.8e-23 Score=207.88 Aligned_cols=290 Identities=13% Similarity=0.150 Sum_probs=199.2
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
..+.++++++.+++++|.+..+++++ |++++..++.+++++||+|++++|.|+++...+. ..+.++..++..
T Consensus 85 ~~~l~~~l~~~la~~~g~~~~i~~ts---G~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 156 (397)
T PRK06939 85 TQDLHKELEEKLAKFLGTEDAILYSS---CFDANGGLFETLLGKEDAIISDALNHASIIDGVR-----LCKAKRYRYANN 156 (397)
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEEcC---hHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHH-----hcCCceEEeCCC
Confidence 35678899999999999887788888 8889999999999999999999999999887764 245666677667
Q ss_pred CHHHHHHhhhc---C--CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC-CC-CCC----c--cCC--CCe
Q 013079 177 DHEMVNSAIVQ---G--RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PL-VLS----P--ARL--GAD 241 (450)
Q Consensus 177 d~~~l~~ai~~---~--~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~-~~~----~--~~~--g~d 241 (450)
|++++++.+.. + ++++|++++++|++|.+.++++|.++|+++|+++|+|++|. .+ ... + ..+ ++|
T Consensus 157 d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~ 236 (397)
T PRK06939 157 DMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVD 236 (397)
T ss_pred CHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCc
Confidence 89998888721 3 78899988899999999999999999999999999999993 22 211 0 112 468
Q ss_pred EEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHH--H-HHHHHccCCcHHHHHHHHHHHHHHHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK--V-AFELSERIPHLGLRMKEHCHRALIFAR 318 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~--~-a~~~~~~~~~l~~~~~~~~~~~~~l~~ 318 (450)
++++|+||++++ .++ ||+++++++++.+....... ..+++..+. . +..++..+.......+++.++++.+.+
T Consensus 237 i~~~S~sK~~~g--~r~-G~v~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~ 311 (397)
T PRK06939 237 IITGTLGKALGG--ASG-GYTAGRKEVIDWLRQRSRPY--LFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFRE 311 (397)
T ss_pred EEEEECHHHhCc--cCc-eEEEeCHHHHHHHHHhCccc--cccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 999999999963 365 99999998888876543211 122222222 2 111222222234455667888899999
Q ss_pred HHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccc
Q 013079 319 RMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSS 398 (450)
Q Consensus 319 ~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~ 398 (450)
.|++++..+..| .++++.+.++.......|...|... | +.+..+.. +.
T Consensus 312 ~L~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~L~~~---g-I~v~~~~~------~~-- 359 (397)
T PRK06939 312 GMTAAGFTLGPG--------------------EHPIIPVMLGDAKLAQEFADRLLEE---G-VYVIGFSF------PV-- 359 (397)
T ss_pred HHHHcCCCcCCC--------------------CCCEEEEEECCHHHHHHHHHHHHHC---C-ceEeeeCC------CC--
Confidence 998876533211 2346666666544466787777652 3 44442110 00
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 399 TSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 399 ~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
.+-..+.||++++ ...+++.++.+.+.|.++.+
T Consensus 360 ------------~~~~~~~iRi~~~-~~~~~~~i~~~l~~L~~~~~ 392 (397)
T PRK06939 360 ------------VPKGQARIRTQMS-AAHTKEQLDRAIDAFEKVGK 392 (397)
T ss_pred ------------CCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHH
Confidence 0011367999998 65556666666666665543
No 176
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.93 E-value=4.8e-23 Score=206.78 Aligned_cols=300 Identities=16% Similarity=0.159 Sum_probs=200.0
Q ss_pred ccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 93 YSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 93 y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
||+.. ...+||+++|+++|.+.++++++ |+.++..++.+++++||+|++.++.|.++...+. ..+.++.+
T Consensus 39 yg~~~--~~~~LE~~lA~~~g~e~al~~~s---G~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~~-----l~~~~~~~ 108 (392)
T PLN03227 39 YGTID--AHLELEQCMAEFLGTESAILYSD---GASTTSSTVAAFAKRGDLLVVDRGVNEALLVGVS-----LSRANVRW 108 (392)
T ss_pred cCChH--HHHHHHHHHHHHhCCCcEEEecC---cHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHH-----HcCCeEEE
Confidence 77654 78999999999999999999999 9999999999999999999999999999877652 23457777
Q ss_pred eCCCCHHHHHH---hhh----------cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC--CCC-----
Q 013079 173 VDISDHEMVNS---AIV----------QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS--PLV----- 232 (450)
Q Consensus 173 v~~~d~~~l~~---ai~----------~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~--~~~----- 232 (450)
++..|++++++ .+. ++++++|++|+++|++|.+.|+++|.++|+++|+++|+||+++ .+.
T Consensus 109 ~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g 188 (392)
T PLN03227 109 FRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRG 188 (392)
T ss_pred eCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCc
Confidence 77666665554 331 1368899999999999999999999999999999999999984 121
Q ss_pred ------CCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHH---HHHHHHccCCcHH
Q 013079 233 ------LSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK---VAFELSERIPHLG 303 (450)
Q Consensus 233 ------~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~---~a~~~~~~~~~l~ 303 (450)
..| ..++|+++.|++|.+|+. ||++++++++++.+.....+ . ..+..+++. ++..++......+
T Consensus 189 ~~~~~g~~p-~~~~Div~~slsk~~g~~----gg~v~~~~~~~~~~~~~~~~-~-~~~~~~~p~~~~aa~~al~~~~~~~ 261 (392)
T PLN03227 189 SLEHAGLKP-MVHAEIVTFSLENAFGSV----GGMTVGSEEVVDHQRLSGSG-Y-CFSASAPPFLAKADATATAGELAGP 261 (392)
T ss_pred HHHHcCCCC-CCCceEEEeechhhhhcc----CcEEecCHHHHHHHHHhCcC-c-cccCCCCHHHHHHHHHHHHHHhcCH
Confidence 112 236799999999998854 48888898888766543221 1 233332222 2222332222234
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeCC---CCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHH---------HHHHHHH
Q 013079 304 LRMKEHCHRALIFARRMKKLGLKVLYP---GLEDHPHHELLKSMANKEYGFGGLLCLDMETEEK---------ANRLMNY 371 (450)
Q Consensus 304 ~~~~~~~~~~~~l~~~L~~~~~~v~~p---~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~---------~~~~~~~ 371 (450)
.+.++..++.+++.+.|++.+...... ++.- .....|+++.+.+.+... ...+.+.
T Consensus 262 ~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~------------~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 329 (392)
T PLN03227 262 QLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVI------------TSDPISPIIYLRLSDQEATRRTDETLILDQIAHH 329 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccccc------------CCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHH
Confidence 567778888999999998643211000 0000 000246789999975322 2356666
Q ss_pred hhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 372 LQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 372 l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
+.. .|++....|.. .....+ -+++..||+++. ...+++.++.+.++|+++
T Consensus 330 ~~~---~Gi~~~~~~~~-~~~~~~----------------~~P~~~iR~~~~-~~~t~eei~~~~~~l~~~ 379 (392)
T PLN03227 330 SLS---EGVAVVSTGGH-VKKFLQ----------------LVPPPCLRVVAN-ASHTREDIDKLLTVLGEA 379 (392)
T ss_pred HHH---CCCEEEecccc-cCCcCC----------------CCCCceEEEEec-CCCCHHHHHHHHHHHHHH
Confidence 654 23222222211 000001 123567999999 877777777766666654
No 177
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=7.1e-23 Score=207.21 Aligned_cols=291 Identities=17% Similarity=0.174 Sum_probs=199.5
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc--CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
.+..++++++||+++|.+.+++++| |++|+..++..+.+ +|+.|++....|.++...+. ..|.++..++.
T Consensus 89 ~~~~~~le~~la~~~g~~~~~~~~S---G~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~-----~~g~~~~~~~~ 160 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAALLFTS---GYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIR-----HSRAEKRIFRH 160 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCC---cHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHH-----HcCCeEEEeCC
Confidence 4578999999999999999999999 99999999987765 67877777777877776664 24667777777
Q ss_pred CCHHHHHHhhhc---CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCC-------c--cCCCCeE
Q 013079 176 SDHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLS-------P--ARLGADV 242 (450)
Q Consensus 176 ~d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~-------~--~~~g~di 242 (450)
.|++++++.+.. +++++|++++++|++|.+.|+++|.++|+++|+++|+|++|+ ++... . .....|+
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i 240 (406)
T PRK13393 161 NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTI 240 (406)
T ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeE
Confidence 788888877731 367899999999999999999999999999999999999983 33110 0 1113589
Q ss_pred EEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCch-HHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH
Q 013079 243 VVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN-PKVAFELSERIPHLGLRMKEHCHRALIFARRMK 321 (450)
Q Consensus 243 ~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~-~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~ 321 (450)
+++|++|.+|+.| ||+++++++++.+.....++....+..+. ..++..++..++.......++.++++++.+.|+
T Consensus 241 ~~~tlsKa~g~~G----G~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~ 316 (406)
T PRK13393 241 IEGTLAKAFGVMG----GYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLD 316 (406)
T ss_pred EEEeCchhhcccC----ceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999764 89999988888876654322111112221 222323333332222333456778889999998
Q ss_pred hCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCC
Q 013079 322 KLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSS 401 (450)
Q Consensus 322 ~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~ 401 (450)
+.+..+. + +.|+++.+.+.+...+..+.+.|... .| +.++.+. .|...
T Consensus 317 ~~g~~~~-~-------------------~~~~i~~v~~~~~~~~~~l~~~L~~~--~G-i~v~~~~------~p~~p--- 364 (406)
T PRK13393 317 KAGIPHL-P-------------------NPSHIVPVMVGDPVLCKQISDELLDR--YG-IYVQPIN------YPTVP--- 364 (406)
T ss_pred HcCCCcC-C-------------------CCCCeEEEEeCCHHHHHHHHHHHHHh--CC-EEEEeEC------CCCCC---
Confidence 7654322 1 24557777776544456677766531 23 3433321 11110
Q ss_pred CCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 402 ELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 402 ~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
...+.||||++ ...++++++.+.++|.++.+
T Consensus 365 -----------~g~~~iRis~~-~~~t~edid~l~~~l~~~~~ 395 (406)
T PRK13393 365 -----------RGTERLRITPS-PLHTDADIEHLVQALSEIWA 395 (406)
T ss_pred -----------CCCceEEEEEC-CCCCHHHHHHHHHHHHHHHH
Confidence 11367999999 88888888888888877643
No 178
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.93 E-value=2.2e-23 Score=211.71 Aligned_cols=296 Identities=16% Similarity=0.122 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHh----C----CCeEEEecChHHHHHHHHHHHHHhcc-----CCCEEEE-eCCCchhHHHHHHHhCC-Cc
Q 013079 101 VLNLSRQMAALE----G----TEAAYCTASDKAGMSAISSVLMQLCS-----SGGHVVA-ARTLYGGTHALLTHFFP-RA 165 (450)
Q Consensus 101 ~~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~~al~~l~~-----~gd~Vi~-~~~~y~~~~~~~~~~~~-~~ 165 (450)
...||+.||+++ | ++++++|+| +++|+.+++..++. +||.|++ ..|+|+++......... ..
T Consensus 76 ~~~LR~aia~~~~~~~g~~v~~~~I~it~G---a~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~ 152 (416)
T PRK09440 76 KDELIEALAALLNERYGWNISPQNIALTNG---SQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVS 152 (416)
T ss_pred CHHHHHHHHHHHHHHhCCCCChhhEEEccC---hHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceee
Confidence 345666666654 3 357899999 99999999998885 5899999 79999998764421100 00
Q ss_pred cCeeEEEeCC------CCHHHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCC---
Q 013079 166 CNITTTFVDI------SDHEMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVL--- 233 (450)
Q Consensus 166 ~g~~v~~v~~------~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~--- 233 (450)
.+..+..++. .|+++++ + .++++++++++||||||.+.+ +++|+++|+++++++|+|++|..+..
T Consensus 153 ~~~~~~~~~~~~~~~~~d~~~l~--~-~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~ 229 (416)
T PRK09440 153 YRPNIELLPEGQFKYHVDFEHLH--I-DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGII 229 (416)
T ss_pred cccccccccccccccCCCHHHcc--c-CCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcc
Confidence 1222222221 2677776 4 567899999999999999977 67888899999999999999953211
Q ss_pred --C--ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcH---HH-H
Q 013079 234 --S--PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHL---GL-R 305 (450)
Q Consensus 234 --~--~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l---~~-~ 305 (450)
+ +...+..++++|+||. +++|+|+ ||+++++++++.+....... ....+.+.+.++..++...... .+ .
T Consensus 230 ~~~~~~~~~~~vI~~~SfSK~-~~pGlRi-G~~i~~~~l~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 306 (416)
T PRK09440 230 FSEATPLWNPNIILCMSLSKL-GLPGVRC-GIVIADEEIIEALSNMNGII-SLAPGRLGPAIAAEMIESGDLLRLSETVI 306 (416)
T ss_pred hhhcCccccCCeEEEeccccc-CCCcceE-EEEeCCHHHHHHHHHHHHHh-ccCCCcHHHHHHHHHhccchHHHHHHHHH
Confidence 1 1112467899999996 8899999 99999999998887765521 1233455555555555433322 22 2
Q ss_pred HHHHHHHHHHHHHHHHhC--C--CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhccccccc
Q 013079 306 MKEHCHRALIFARRMKKL--G--LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGF 380 (450)
Q Consensus 306 ~~~~~~~~~~l~~~L~~~--~--~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~~~~~l~~~~~~g~ 380 (450)
.+.++++++.+.+.|+++ + ..+..|. .|.++|+.++. ......|.+.+.. .|
T Consensus 307 ~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~-------------------gg~fiw~~~~~~~~~~~~~~~~l~~---~g- 363 (416)
T PRK09440 307 RPFYRQKVQLAIALLRRYLPDEPCLIHKPE-------------------GAIFLWLWFKDLPITTEELYQRLKA---RG- 363 (416)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCeEEecCC-------------------CceEEEEECCCCCCCHHHHHHHHHH---CC-
Confidence 334567777777888764 1 2222232 47789999874 2234567766654 23
Q ss_pred cccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC--CCHHHHHHHHHHHHHHhh
Q 013079 381 MAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL--GTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 381 i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~--~~~~~~i~~l~~al~~~~ 443 (450)
+.+..|+....... .. .....++||||++ . ++.++.++.|.+++.++.
T Consensus 364 V~v~pg~~F~~~~~-~~-------------~~~~~~~iRis~~-~~~~~l~~~i~~l~~~~~~~~ 413 (416)
T PRK09440 364 VLVVPGHYFFPGLD-ED-------------WPHAHQCIRMNYV-QDDEEIEKGIAILAEEVEKAY 413 (416)
T ss_pred EEEechHhhCCCCc-cc-------------cCCcCceEEEEec-CCHHHHHHHHHHHHHHHHHHh
Confidence 55555533210000 00 0001368999997 4 344445556666665543
No 179
>PLN02721 threonine aldolase
Probab=99.93 E-value=1.6e-23 Score=207.96 Aligned_cols=282 Identities=17% Similarity=0.209 Sum_probs=192.6
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc-CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS-SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~-~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
.|...++++.||++++.+.++++++ |++++.+++.+++. +||+|++++++|.+..... .... ..|.++.+++.+
T Consensus 39 ~~~~~~l~~~la~~~~~~~~~~~~~---Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~-~~g~~~~~v~~~ 113 (353)
T PLN02721 39 DPTALRLEEEMAKIFGKEAALFVPS---GTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GIST-LGGVHPRTVKNN 113 (353)
T ss_pred CHHHHHHHHHHHHHhCCceeEEecC---ccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhh-hcCceeEecCCC
Confidence 5668999999999999988999999 99998888888777 9999999999986554310 0111 268888877643
Q ss_pred -----CHHHHHHhhhc-------CCceEEEEec-CCCCcccccC---HHHHHHHHHhcCCEEEEeCCC--CCC---CCCc
Q 013079 177 -----DHEMVNSAIVQ-------GRTKVLYFES-ISNPTLAVAN---IPELSRLAHDKGVTVVVDNTF--SPL---VLSP 235 (450)
Q Consensus 177 -----d~~~l~~ai~~-------~~t~lv~i~~-~~NptG~v~~---l~~I~~la~~~gi~livD~~~--~~~---~~~~ 235 (450)
|++++++++ + +++++|++++ +|||+|.+.| +++|.++|+++|+++|+|++| ... ..++
T Consensus 114 ~~~~~d~~~l~~~i-~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~ 192 (353)
T PLN02721 114 EDGTMDLDAIEAAI-RPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPV 192 (353)
T ss_pred cCCCcCHHHHHHHH-HhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCH
Confidence 899999998 5 5899999987 4788999876 789999999999999999986 211 1222
Q ss_pred c--CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCc--hHHHHHHHHccCCcHHHHHHHHHH
Q 013079 236 A--RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTM--NPKVAFELSERIPHLGLRMKEHCH 311 (450)
Q Consensus 236 ~--~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~--~~~~a~~~~~~~~~l~~~~~~~~~ 311 (450)
. ..++|.++.|+||+++++ +|++++.++++++.+...+. ..+..+ ....+......++...+++++..+
T Consensus 193 ~~~~~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 265 (353)
T PLN02721 193 HRLVKAADSVSVCLSKGLGAP---VGSVIVGSKSFIRKAKRLRK----TLGGGMRQVGVLAAAALVALQENVPKLEDDHK 265 (353)
T ss_pred HHHhhhCCEEEEecccccCCc---eeeEEecCHHHHHhHHHHHH----hcCCCeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 226888899999999865 44557788888887765544 111111 111122222233333344555566
Q ss_pred HHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhccccccccccccccc
Q 013079 312 RALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSLGYY 388 (450)
Q Consensus 312 ~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~~~~~l~~~~~~g~i~vs~G~~ 388 (450)
+++.+.+.|++++ ..+.... ..++++++.++.. .....+.+.|... | +.+..+
T Consensus 266 ~~~~l~~~L~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~L~~~---g-i~v~~~-- 321 (353)
T PLN02721 266 KAKLLAEGLNQIKGLRVNVAA------------------VETNIVYFDITDGSRITAEKLCKSLEEH---G-VLLMPG-- 321 (353)
T ss_pred HHHHHHHHHHhCCCcEEecCC------------------ccceEEEEEccCCccccHHHHHHHHHhC---C-cEEecC--
Confidence 7788999998874 3331111 1245888888642 2356777777642 2 333322
Q ss_pred cccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 389 ETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 389 ~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
..+.||++++ ....++.++.+.++|.++
T Consensus 322 -------------------------~~~~lR~~~~-~~~~~~~i~~~~~~l~~~ 349 (353)
T PLN02721 322 -------------------------NSSRIRVVTH-HQISDSDVQYTLSCFQQA 349 (353)
T ss_pred -------------------------CCceEEEEec-CcCCHHHHHHHHHHHHHH
Confidence 1368999999 766777777777777654
No 180
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=3.2e-23 Score=206.76 Aligned_cols=289 Identities=16% Similarity=0.168 Sum_probs=193.3
Q ss_pred CChhHHHHHHHHHHHhCCC----eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHH--HHHHHhCCCccCeeE
Q 013079 97 FNPTVLNLSRQMAALEGTE----AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTH--ALLTHFFPRACNITT 170 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~----~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~--~~~~~~~~~~~g~~v 170 (450)
....++++++.+++++|++ .+++|+| ||++++.++.++..+||++++..+.+.+.. ..++ + .|+++
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~---~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~----~-~g~~~ 104 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGS---GTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAE----Y-LGIPH 104 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCC---CHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHH----H-cCCce
Confidence 3456789999999999975 3789999 999999999999888887666555444332 2222 2 67777
Q ss_pred EEeCCC-----CHHHHHHhhhc-CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeE
Q 013079 171 TFVDIS-----DHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADV 242 (450)
Q Consensus 171 ~~v~~~-----d~~~l~~ai~~-~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di 242 (450)
+.++.+ |++++++++.. .++++|++.+++||||.+.|+++|.++|+++|+++++|+++ +....+..++++|+
T Consensus 105 ~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~ 184 (363)
T TIGR02326 105 HVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDY 184 (363)
T ss_pred EEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccE
Confidence 777653 78999998832 35678889999999999999999999999999999999987 44445556678999
Q ss_pred EEeCCCCcc-ccCccceEEEEEcCHHHHHHHHHHhh-----------------hhhhccCCCchHHHHHHHHccC---Cc
Q 013079 243 VVHSISKFI-SGGADIIAGAVCGPANLVNSMMDLHQ-----------------GALMLLGPTMNPKVAFELSERI---PH 301 (450)
Q Consensus 243 ~~~S~sK~~-g~~g~~igG~l~~~~~~~~~l~~~~~-----------------~~~~~~g~~~~~~~a~~~~~~~---~~ 301 (450)
++.|+||++ +++| + |+++.+++.++.+..... +...+..+.....+...++..+ ..
T Consensus 185 ~~~s~~K~l~~p~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~ 261 (363)
T TIGR02326 185 LISSANKCIQGVPG--F-GFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGG 261 (363)
T ss_pred EEecCccccccCCc--c-eEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhC
Confidence 999999987 5556 5 999888877765432100 0001111222222222222111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccc
Q 013079 302 LGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFG 379 (450)
Q Consensus 302 l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~~~~~l~~~~~~g 379 (450)
++.+.+++.++++++.+.|+++++.+..+... ..+.+++|.++.. .....+.+.|... |
T Consensus 262 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~v~~~L~~~---g 322 (363)
T TIGR02326 262 VAARHQRYQQNQKTLVAGMRALGFEPLLDDEI----------------QSPIITSFYSPEDPDYRFADFYQRLKEQ---G 322 (363)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeeccCccc----------------CCceEEEEECCCCCCCCHHHHHHHHHHC---C
Confidence 45566778899999999999887755432210 1233677887742 2345677777642 3
Q ss_pred ccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEe-CCCCCHHHHHHHHHHHHHHh
Q 013079 380 FMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSV-GYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 380 ~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~-g~~~~~~~~i~~l~~al~~~ 442 (450)
+.++.|.. ...+.||||+ | . ...+.++.+.++|..+
T Consensus 323 -i~v~~g~~------------------------~~~~~iRi~~~~-~-~~~edv~~~l~~l~~~ 359 (363)
T TIGR02326 323 -FVIYPGKV------------------------SQVDCFRIGNIG-E-VDAADITRLLTAIGKA 359 (363)
T ss_pred -EEEECCcC------------------------CCCCEEEEecCC-C-CCHHHHHHHHHHHHHH
Confidence 45554411 0136799996 6 4 4555666666666554
No 181
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.93 E-value=3.2e-23 Score=209.57 Aligned_cols=222 Identities=14% Similarity=0.119 Sum_probs=155.7
Q ss_pred ccccCCCChhHHHHHHHHHHHhC--------CCeEE--EecChHHHHHHHHHHHH---HhccCCCEEEEeCCCchhHHHH
Q 013079 91 FIYSRHFNPTVLNLSRQMAALEG--------TEAAY--CTASDKAGMSAISSVLM---QLCSSGGHVVAARTLYGGTHAL 157 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~g--------~~~~~--~tsg~~~gt~ai~~al~---~l~~~gd~Vi~~~~~y~~~~~~ 157 (450)
+.|+. .....++|+.+|+++. .++++ .|+| +++|+.+++. .++++||+|++++|.|+.+...
T Consensus 66 ~~Y~~--~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G---~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~ 140 (404)
T PTZ00376 66 KEYLP--IEGLQSFIEAAQKLLFGEASYALAEKRIATVQALS---GTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNI 140 (404)
T ss_pred CCCCC--CCCCHHHHHHHHHHhcCCCccccccCeEEEeeccC---cchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH
Confidence 44552 3345678888888642 23455 4889 8888887764 5679999999999999999988
Q ss_pred HHHhCCCccCeeEEEeCC---C----CHHHHHHhhhc--CCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEe
Q 013079 158 LTHFFPRACNITTTFVDI---S----DHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~---~----d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD 225 (450)
++ ..|.++..++. + |++.+++++.+ ++++++++++||||||.+.+ +++|+++|++|++++|+|
T Consensus 141 ~~-----~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D 215 (404)
T PTZ00376 141 FK-----SAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFD 215 (404)
T ss_pred HH-----HcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEe
Confidence 75 36777777765 2 78889888832 35678888999999999975 668888999999999999
Q ss_pred CCCCCCCCCc--------c---CC-CCeEEEeCCCCccccCccceEEEE---EcCHHHHHHHHH----HhhhhhhccCCC
Q 013079 226 NTFSPLVLSP--------A---RL-GADVVVHSISKFISGGADIIAGAV---CGPANLVNSMMD----LHQGALMLLGPT 286 (450)
Q Consensus 226 ~~~~~~~~~~--------~---~~-g~di~~~S~sK~~g~~g~~igG~l---~~~~~~~~~l~~----~~~~~~~~~g~~ 286 (450)
++|..+.++. . .. ...+++.|+||.++++|+|+ ||+ ++++++++.+.. ..... ....+.
T Consensus 216 e~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRv-G~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~ 293 (404)
T PTZ00376 216 MAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERI-GALHIVCANKEEAANVLSQLKLIIRPM-YSSPPI 293 (404)
T ss_pred hhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccccccccc-ceEEEEeCCHHHHHHHHHHHHHHHhhh-cCCCch
Confidence 9997665431 1 11 25799999999999999999 998 578776655432 21111 011233
Q ss_pred chHHHHHHHHccCC-------cHHHHHHHHHHHHHHHHHHHHhCC
Q 013079 287 MNPKVAFELSERIP-------HLGLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 287 ~~~~~a~~~~~~~~-------~l~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
+.+.++..++.... ++....++++++++.+.+.|++++
T Consensus 294 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 338 (404)
T PTZ00376 294 HGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALG 338 (404)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44444444443321 122334567888899999998864
No 182
>PRK08354 putative aminotransferase; Provisional
Probab=99.93 E-value=3.7e-23 Score=201.76 Aligned_cols=159 Identities=18% Similarity=0.214 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHH
Q 013079 101 VLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEM 180 (450)
Q Consensus 101 ~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~ 180 (450)
...+++.+|+..+ +++++|+| +++++.+++.. +.+||+|+++.|+|+.+...++ ..|.++..++ .|++.
T Consensus 42 ~~~l~~~ia~~~~-~~I~vt~G---~~~al~~~~~~-~~~gd~vlv~~P~y~~~~~~~~-----~~g~~~~~~~-~d~~~ 110 (311)
T PRK08354 42 YEWLEEEFSKLFG-EPIVITAG---ITEALYLIGIL-ALRDRKVIIPRHTYGEYERVAR-----FFAARIIKGP-NDPEK 110 (311)
T ss_pred hHHHHHHHHHHHC-CCEEECCC---HHHHHHHHHHh-hCCCCeEEEeCCCcHHHHHHHH-----HcCCEEeecC-CCHHH
Confidence 4678999999998 57999999 99999988754 4589999999999999988875 3677777764 47889
Q ss_pred HHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc--cCCCCeEEEeCCCCccccCc
Q 013079 181 VNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP--ARLGADVVVHSISKFISGGA 255 (450)
Q Consensus 181 l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~--~~~g~di~~~S~sK~~g~~g 255 (450)
+++++ + +++++++++||||||.+.+ +++|+++|+++|+++|+||+|..+..+. ......+++.|+||.++.+|
T Consensus 111 l~~~~-~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~G 188 (311)
T PRK08354 111 LEELV-E-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPG 188 (311)
T ss_pred HHHhh-c-CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCcc
Confidence 98887 4 5788999999999999976 6677888889999999999996665432 12357899999999999999
Q ss_pred cceEEEEEcCHHHHHHHHHHh
Q 013079 256 DIIAGAVCGPANLVNSMMDLH 276 (450)
Q Consensus 256 ~~igG~l~~~~~~~~~l~~~~ 276 (450)
+|+ ||+++ +.+.+...+
T Consensus 189 lRi-G~~v~---~~~~l~~~~ 205 (311)
T PRK08354 189 IRV-GYVKG---FEEAFRSVR 205 (311)
T ss_pred cee-eeeee---hHHHHHHcC
Confidence 999 99987 445555443
No 183
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=2.3e-23 Score=210.12 Aligned_cols=297 Identities=14% Similarity=0.122 Sum_probs=200.4
Q ss_pred cCCCChhHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 94 SRHFNPTVLNLSRQMAALEGTE---AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 94 ~r~~~~~~~~l~~~iA~l~g~~---~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
+......++++++.+++++|++ .++++++ |+++++.++..++++||+|+++++.|.+... .....+ .|.++
T Consensus 37 ~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~---gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~--~~~~~~-~g~~v 110 (401)
T PLN02409 37 SPAFPALTKELLEDVKYIFKTKSGTPFIFPTT---GTGAWESALTNTLSPGDKVVSFRIGQFSLLW--IDQMQR-LNFDV 110 (401)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCC---cHHHHHHHHHhcCCCCCEEEEeCCCchhHHH--HHHHHH-cCCce
Confidence 3334567889999999999874 3688999 9999999999889999999999999876642 122223 68888
Q ss_pred EEeCCC-----CHHHHHHhhhcC----CceEEEEecCCCCcccccCHHHHHHH--HHhcCCEEEEeCCC--CCCCCCccC
Q 013079 171 TFVDIS-----DHEMVNSAIVQG----RTKVLYFESISNPTLAVANIPELSRL--AHDKGVTVVVDNTF--SPLVLSPAR 237 (450)
Q Consensus 171 ~~v~~~-----d~~~l~~ai~~~----~t~lv~i~~~~NptG~v~~l~~I~~l--a~~~gi~livD~~~--~~~~~~~~~ 237 (450)
+.++.+ |++++++++ ++ ++++|++.++.|+||.+.|+++|.++ |+++|+++++|+++ +...++..+
T Consensus 111 ~~v~~~~~~~~~~~~l~~~l-~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~ 189 (401)
T PLN02409 111 DVVESPWGQGADLDILKSKL-RQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDE 189 (401)
T ss_pred EEEECCCCCCCCHHHHHHHH-hhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccc
Confidence 877653 789999999 53 79999999999999999999999999 99999999999998 445556667
Q ss_pred CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhh--------------hhhccCCCchH---HHHHHHHccC-
Q 013079 238 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG--------------ALMLLGPTMNP---KVAFELSERI- 299 (450)
Q Consensus 238 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~--------------~~~~~g~~~~~---~~a~~~~~~~- 299 (450)
+++|+++.|.||++++|.. + |+++.+++.++++...... .......+++. .+...++..+
T Consensus 190 ~~~D~~~~s~~K~l~~P~G-~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~ 267 (401)
T PLN02409 190 WGVDVALTGSQKALSLPTG-L-GIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIF 267 (401)
T ss_pred cCccEEEEcCccccCcCCC-c-ceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHH
Confidence 7999999999999865432 5 9999998887776432110 00010112222 1111222211
Q ss_pred -CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccc
Q 013079 300 -PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQF 378 (450)
Q Consensus 300 -~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~ 378 (450)
..++...+++.++++++.+.|++.+.++..|. + . ...+.+++|.++...+...+...+.. .+
T Consensus 268 ~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~-~---~-----------~~s~~v~~~~~p~~~~~~~l~~~l~~--~~ 330 (401)
T PLN02409 268 EEGLENVIARHARLGEATRLAVEAWGLKLCTKK-P---E-----------WRSDTVTAVVVPEGIDSAEIVKNAWK--KY 330 (401)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCC-h---h-----------hcccceEEEeCCCCCCHHHHHHHHHH--hC
Confidence 12445566778888999999988877655432 0 0 01334778887633224456555532 23
Q ss_pred cccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 379 GFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 379 g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
| +.+..|.. ......+|||.- -++..+.+..+..+|..
T Consensus 331 ~-i~i~~G~~-----------------------~~~~~~~Rig~~-g~~~~~~~~~~~~~~~~ 368 (401)
T PLN02409 331 N-LSLGLGLN-----------------------KVAGKVFRIGHL-GNVNELQLLGALAGVEM 368 (401)
T ss_pred C-EEEEcCCC-----------------------cccCCEEEEcCC-CCCCHHHHHHHHHHHHH
Confidence 3 44444411 012478999977 55555555555555554
No 184
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.93 E-value=1.4e-22 Score=205.18 Aligned_cols=293 Identities=17% Similarity=0.174 Sum_probs=198.0
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc--CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
.++...+++++||+++|.+..+++++ |++|+..++..++. +++.|+.....|.+....+. ..+.++..++
T Consensus 89 ~~~~~~~l~~~la~~~g~~~~~~~~s---G~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~-----~~~~~~~~~~ 160 (407)
T PRK09064 89 TNHYHVELERELADLHGKEAALVFTS---GYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIR-----RSRCEKHIFR 160 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECc---HHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHH-----HcCCcEEEEC
Confidence 36788999999999999888888899 99999988887654 66666666556665555443 2455666666
Q ss_pred CCCHHHHHHhhhc---CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC-C-CCCC------ccCC--CCe
Q 013079 175 ISDHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-P-LVLS------PARL--GAD 241 (450)
Q Consensus 175 ~~d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~-~~~~------~~~~--g~d 241 (450)
..|++++++.+.. +++++|++++++|++|.+.|+++|.++|+++|+++|+||+|+ + +.-. ...+ ..|
T Consensus 161 ~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~d 240 (407)
T PRK09064 161 HNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRID 240 (407)
T ss_pred CCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCe
Confidence 6788888887731 568999999999999999999999999999999999999983 3 2211 0111 358
Q ss_pred EEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCc-hHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTM-NPKVAFELSERIPHLGLRMKEHCHRALIFARRM 320 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L 320 (450)
++++|+||.+|+.| ||+++++++++.+.....+.....+..+ ...++...+..++......++..++++++.+.|
T Consensus 241 iv~~t~sKa~g~~G----G~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L 316 (407)
T PRK09064 241 IIEGTLAKAFGVMG----GYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAAL 316 (407)
T ss_pred EEEEecchhhhccC----ceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999764 8999999888877654432211112221 122222222222323334566788889999999
Q ss_pred HhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccC
Q 013079 321 KKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTS 400 (450)
Q Consensus 321 ~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~ 400 (450)
++.++.+..+ .++++.+.+++...+..+.+.|.. ..| +.+... ..|..
T Consensus 317 ~~~g~~~~~~--------------------~~~iv~i~~~~~~~~~~l~~~L~~--~~g-i~v~~~------~~p~~--- 364 (407)
T PRK09064 317 DAAGIPVMPN--------------------ESHIVPVMVGDPEKCKKASDMLLE--EHG-IYVQPI------NYPTV--- 364 (407)
T ss_pred HHcCCCCCCC--------------------CCCEEEEEeCCHHHHHHHHHHHHH--hCC-EEEeeE------CCCCC---
Confidence 8876543211 245788888754446667776642 123 333321 01110
Q ss_pred CCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhc
Q 013079 401 SELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDS 445 (450)
Q Consensus 401 ~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~ 445 (450)
....+.||||++ ...++++++.+.++|+++.+.
T Consensus 365 -----------~~~~~~lRis~~-~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 365 -----------PRGTERLRITPT-PFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred -----------CCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence 001357999999 888888888888888776543
No 185
>PLN02368 alanine transaminase
Probab=99.93 E-value=2.1e-23 Score=209.70 Aligned_cols=217 Identities=12% Similarity=0.088 Sum_probs=162.9
Q ss_pred HHHHHHHHHHh----C----CCeEEEecChHHHHHHHHHHHHHhc-cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 102 LNLSRQMAALE----G----TEAAYCTASDKAGMSAISSVLMQLC-SSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 102 ~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~~al~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
..||+.||+++ | .+++++|+| +++++..++.+++ .+||.|+++.|.|+.+...+. ..|.++..
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~G---a~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~-----~~g~~~v~ 181 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDG---ASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATIS-----LLGGTLVP 181 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEccc---HHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHH-----HcCCEEEE
Confidence 45666666654 4 357899999 9999999999887 699999999999999988875 35667766
Q ss_pred eCC-------CCHHHHHHhhhcC------CceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc-
Q 013079 173 VDI-------SDHEMVNSAIVQG------RTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP- 235 (450)
Q Consensus 173 v~~-------~d~~~l~~ai~~~------~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~- 235 (450)
++. .|+++|++++ ++ +++++++++||||||.+.+ +++|+++|+++|++||+||+|..+.++.
T Consensus 182 v~~~~~~~~~~d~~~le~~i-~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~ 260 (407)
T PLN02368 182 YYLEESENWGLDVNNLRQSV-AQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDE 260 (407)
T ss_pred EecccccCCCCCHHHHHHHH-HHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 653 2789999988 43 6899999999999999976 6688889999999999999996654321
Q ss_pred --c--------C-------CCCeEEEeCCCCcc-ccCccceEEEEE---cCHHHHHHHHHHhhhhhhccCCCchHHHHHH
Q 013079 236 --A--------R-------LGADVVVHSISKFI-SGGADIIAGAVC---GPANLVNSMMDLHQGALMLLGPTMNPKVAFE 294 (450)
Q Consensus 236 --~--------~-------~g~di~~~S~sK~~-g~~g~~igG~l~---~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~ 294 (450)
. . .+..+++.|+||.| +++|+|+ ||++ .++++++.+..... . ....+++.+.++..
T Consensus 261 ~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRi-Gy~i~~~~~~~li~~~~~~~~-~-~~~~~~~~Q~aa~~ 337 (407)
T PLN02368 261 RPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRG-GYFEMTNIPPKTVEEIYKVAS-I-ALSPNVSGQIFMGL 337 (407)
T ss_pred CCcccHHHHHhhhcccccccceEEEEecCCcccccCCccce-EEEEEeCCCHHHHHHHHHHhc-c-cCCCCcHHHHHHHH
Confidence 0 1 12568999999998 8999999 9998 58888888877532 1 23345566666665
Q ss_pred HHccCC----c----H---HHHHHHHHHHHHHHHHHHHhCC-CeeeCC
Q 013079 295 LSERIP----H----L---GLRMKEHCHRALIFARRMKKLG-LKVLYP 330 (450)
Q Consensus 295 ~~~~~~----~----l---~~~~~~~~~~~~~l~~~L~~~~-~~v~~p 330 (450)
++...+ . . ....+.++++++.+.+.|++++ ..+..|
T Consensus 338 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P 385 (407)
T PLN02368 338 MVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFT 385 (407)
T ss_pred HhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCC
Confidence 554321 1 2 2235667889999999999874 344444
No 186
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.92 E-value=5.4e-23 Score=205.50 Aligned_cols=291 Identities=14% Similarity=0.157 Sum_probs=196.4
Q ss_pred hhHHHHHHHHHHHhCCCe----EEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 99 PTVLNLSRQMAALEGTEA----AYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~~----~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
...+++++.+++++|+++ +++|+| |+++++.++.++..+||+|++..+.|.+... .....+ .|+++..++
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~---gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~--~~~~~~-~g~~~~~i~ 110 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGS---GTFSVEAAIGSLVPRDGKVLVPDNGAYGARI--AQIAEY-LGIAHVVLD 110 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCC---cHHHHHHHHHhccCCCCeEEEEeCCchHHHH--HHHHHH-cCCcEEEEE
Confidence 478999999999999742 578999 9999999999999999999988877765531 111122 677887776
Q ss_pred CC-----CHHHHHHhhhc-CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeC
Q 013079 175 IS-----DHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHS 246 (450)
Q Consensus 175 ~~-----d~~~l~~ai~~-~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S 246 (450)
.+ |++++++++.. +++++|++.+++||||.+.|+++|.++|+++|+++|+|+++ +....+....++|+++.|
T Consensus 111 ~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s 190 (368)
T PRK13479 111 TGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISS 190 (368)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEec
Confidence 53 78999998832 35678999999999999999999999999999999999876 333445555689999999
Q ss_pred CCCcc-ccCccceEEEEEcCHHHHHHHHHHhhh----------------hhhccCCCchHHHHHHHHc---cCCcHHHHH
Q 013079 247 ISKFI-SGGADIIAGAVCGPANLVNSMMDLHQG----------------ALMLLGPTMNPKVAFELSE---RIPHLGLRM 306 (450)
Q Consensus 247 ~sK~~-g~~g~~igG~l~~~~~~~~~l~~~~~~----------------~~~~~g~~~~~~~a~~~~~---~~~~l~~~~ 306 (450)
++|++ |++| + |+++.++++++.+...... ....+.+.........++. ....+.++.
T Consensus 191 ~~K~l~g~~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~ 267 (368)
T PRK13479 191 ANKCIEGVPG--F-GFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARG 267 (368)
T ss_pred CccccccCCC--c-eEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 99976 5667 5 9999998887776432110 0001111111111112221 122355666
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhccccccccccc
Q 013079 307 KEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVS 384 (450)
Q Consensus 307 ~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~~~~~l~~~~~~g~i~vs 384 (450)
+++.++++++.+.|+++++++..+... ..+.+++|.++.. .+..++.+.|...+ +.++
T Consensus 268 ~~~~~~~~~l~~~L~~~g~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----i~v~ 327 (368)
T PRK13479 268 ARYANNQRTLVAGMRALGFEPLLDAEI----------------QSPIIVTFHAPADPAYDFKEFYERLKEQG----FVIY 327 (368)
T ss_pred HHHHHHHHHHHHHHHHcCCcccCCchh----------------cCceEEEEECCCCCCcCHHHHHHHHHHCC----EEEe
Confidence 788899999999999987754433210 1223677776632 13456777776532 4544
Q ss_pred cccccccccccccccCCCCCHHHHHhcCCCCCeEEEEe-CCCCCHHHHHHHHHHHHHHhhh
Q 013079 385 LGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSV-GYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 385 ~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~-g~~~~~~~~i~~l~~al~~~~~ 444 (450)
.|.. ...+.+|+|. | .++.+.++.+.++|+++.+
T Consensus 328 ~g~~------------------------~~~~~iRis~~~--~~t~edi~~~l~~L~~~l~ 362 (368)
T PRK13479 328 PGKL------------------------TQVDTFRIGCIG--DVDAADIRRLVAAIAEALY 362 (368)
T ss_pred cCCC------------------------CCCCEEEEecCC--CCCHHHHHHHHHHHHHHHH
Confidence 3311 0135799996 6 3456666777777766543
No 187
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.7e-23 Score=214.07 Aligned_cols=144 Identities=12% Similarity=0.248 Sum_probs=117.0
Q ss_pred eEEEecChHHHHHHHHHHHHH-----hccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC-------CCHHHHHH
Q 013079 116 AAYCTASDKAGMSAISSVLMQ-----LCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI-------SDHEMVNS 183 (450)
Q Consensus 116 ~~~~tsg~~~gt~ai~~al~~-----l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~-------~d~~~l~~ 183 (450)
++++|+| +++|+..++.+ ++.+||+|+++.|.|+.+...+. +. . .+..+..++. .|++++++
T Consensus 163 ~I~vT~G---a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~-l~-g-~~~~~v~v~~~~~~~f~~d~~~l~~ 236 (527)
T PRK09275 163 DLFAVEG---GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE-LP-R-YDLEVVHINADEENEWQYPDSELEK 236 (527)
T ss_pred eEEEeCC---HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH-Hc-C-CCeEEEEeecCcccCCCCCHHHHHh
Confidence 6899999 99999998886 68999999999999999987753 21 1 3555555542 26789999
Q ss_pred hhhcCCceEEEEecCCCCcccccC---HHHHHHHHHh--cCCEEEEeCCCCCCCCCccC-----CCCeEEEeCCCCcccc
Q 013079 184 AIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHD--KGVTVVVDNTFSPLVLSPAR-----LGADVVVHSISKFISG 253 (450)
Q Consensus 184 ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~--~gi~livD~~~~~~~~~~~~-----~g~di~~~S~sK~~g~ 253 (450)
++ ++++++|++++||||||.+.+ +++|+++|++ ++++||+|++|..+...... ....+++.|+||.+++
T Consensus 237 ~~-~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~m 315 (527)
T PRK09275 237 LR-DPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGA 315 (527)
T ss_pred hc-CCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccC
Confidence 88 889999999999999999987 7788888964 59999999999655432111 1468999999999999
Q ss_pred CccceEEEEEcCHH
Q 013079 254 GADIIAGAVCGPAN 267 (450)
Q Consensus 254 ~g~~igG~l~~~~~ 267 (450)
+|+|+ ||++++++
T Consensus 316 tG~Rl-G~i~~~~~ 328 (527)
T PRK09275 316 TGWRL-GVIALHED 328 (527)
T ss_pred cHhHH-hhhhcCch
Confidence 99999 99998865
No 188
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=4.7e-23 Score=203.37 Aligned_cols=285 Identities=19% Similarity=0.122 Sum_probs=192.0
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC-
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI- 175 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~- 175 (450)
..+..+++++.+++++|.+.+++++| |++++.+++.+++++||+|+++.+.|.++..... .. +..|.++..++.
T Consensus 30 ~~~~~~~l~~~~a~~~g~~~~~~~~~---gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~~-~~-~~~g~~~~~v~~~ 104 (338)
T cd06502 30 EDPTTAKLEARAAELFGKEAALFVPS---GTAANQLALAAHTQPGGSVICHETAHIYTDEAGA-PE-FLSGVKLLPVPGE 104 (338)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecC---chHHHHHHHHHhcCCCCeEEEecCcceeeecCCc-HH-HHcCceEEeecCC
Confidence 45778999999999999778899999 9999999999999999999999999876543210 00 125778877765
Q ss_pred ---CCHHHHHHhhhcC-------CceEEEEecCCCCccc--ccCHHHHHHHHHhcCCEEEEeCCCCC-----CCCC--cc
Q 013079 176 ---SDHEMVNSAIVQG-------RTKVLYFESISNPTLA--VANIPELSRLAHDKGVTVVVDNTFSP-----LVLS--PA 236 (450)
Q Consensus 176 ---~d~~~l~~ai~~~-------~t~lv~i~~~~NptG~--v~~l~~I~~la~~~gi~livD~~~~~-----~~~~--~~ 236 (450)
.|++++++++ ++ ++++|++++|+||+|. ..++++|+++|+++|+++|+|++|.. .... ..
T Consensus 105 ~~~~d~~~l~~~i-~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~ 183 (338)
T cd06502 105 NGKLTPEDLEAAI-RPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTY 183 (338)
T ss_pred CCcCCHHHHHHHh-hccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHH
Confidence 3889999998 43 7899999999998443 24678899999999999999998621 1111 11
Q ss_pred CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCC--cHHHHHHHHHHHHH
Q 013079 237 RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP--HLGLRMKEHCHRAL 314 (450)
Q Consensus 237 ~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~--~l~~~~~~~~~~~~ 314 (450)
..++|+++.|+||+++++| |++++.++++++.+....... ..+...+...+..+...++ ....+.++..++++
T Consensus 184 ~~~~d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~ 258 (338)
T cd06502 184 KSGVDSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQA--GGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMAR 258 (338)
T ss_pred HhcCCEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHh--CCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 2368899999999999876 456678888888887654311 0111122222222222222 24455677778889
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccccccccccc
Q 013079 315 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMS 393 (450)
Q Consensus 315 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~ 393 (450)
++.+.|++++..+ +|. .++++.+.++ .......+.+.+......|+ .+.
T Consensus 259 ~l~~~L~~~~~~~-~~~-------------------~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi-~~~--------- 308 (338)
T cd06502 259 RLAEALEELGGLE-SEV-------------------QTNIVLLDPVEANAVFVELSKEAIERRGEGV-LFY--------- 308 (338)
T ss_pred HHHHHHHhcCCCc-ccc-------------------cCCeEEEecCCccHHHHHHHHHHHHhhhCCE-EEE---------
Confidence 9999999877632 221 3457777775 32333444444321000121 111
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 394 CSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
+ . ..+.|||+++ ...++++++.+.+++++
T Consensus 309 -~---------------~--~~~~lRi~~~-~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 309 -A---------------W--GEGGVRFVTH-WDTTEEDVDELLSALKA 337 (338)
T ss_pred -e---------------c--CCCeEEEEee-cCCCHHHHHHHHHHHhc
Confidence 0 0 1267999999 88788888888887754
No 189
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.92 E-value=2.5e-22 Score=198.54 Aligned_cols=288 Identities=23% Similarity=0.247 Sum_probs=198.4
Q ss_pred CCChhHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccC
Q 013079 96 HFNPTVLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACN 167 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g 167 (450)
...+...++++.++++++ .+.+++++| +++++..++.++.++||+|+++++.|+++...++ ..|
T Consensus 33 ~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~---~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~-----~~~ 104 (350)
T cd00609 33 YPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNG---AQEALSLLLRALLNPGDEVLVPDPTYPGYEAAAR-----LAG 104 (350)
T ss_pred CCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecC---cHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-----HCC
Confidence 344556667777777765 346899999 9999999999998999999999999999988875 256
Q ss_pred eeEEEeCCC-----CH--HHHHHhhhcCCceEEEEecCCCCcccccCHHH---HHHHHHhcCCEEEEeCCCCCCCC----
Q 013079 168 ITTTFVDIS-----DH--EMVNSAIVQGRTKVLYFESISNPTLAVANIPE---LSRLAHDKGVTVVVDNTFSPLVL---- 233 (450)
Q Consensus 168 ~~v~~v~~~-----d~--~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~---I~~la~~~gi~livD~~~~~~~~---- 233 (450)
.++.+++.+ +. +.++..+ .+++++|++++++||||.+.|+++ |.++|+++|+++|+|++|+.+..
T Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~ 183 (350)
T cd00609 105 AEVVPVPLDEEGGFLLDLELLEAAK-TPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEP 183 (350)
T ss_pred CEEEEEecccccCCccCHHHHHhhc-CccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcc
Confidence 777777654 22 4555555 788999999999999999988554 45899999999999999844321
Q ss_pred -----CccCCCCeEEEeCCCCccccCccceEEEEEcCH-HHHHHHHHHhhhhhhccCCCchHHHHHHHHccC-CcHHHHH
Q 013079 234 -----SPARLGADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQGALMLLGPTMNPKVAFELSERI-PHLGLRM 306 (450)
Q Consensus 234 -----~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~-~~l~~~~ 306 (450)
.....+.|+++.|+||+++.+|.++ |+++.++ ++.+.+...... .....+...+.++..++... +.+....
T Consensus 184 ~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~-G~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 261 (350)
T cd00609 184 PPALALLDAYERVIVLRSFSKTFGLPGLRI-GYLIAPPEELLERLKKLLPY-TTSGPSTLSQAAAAAALDDGEEHLEELR 261 (350)
T ss_pred cccccCcCccCcEEEEeecccccCCcccce-EEEecCHHHHHHHHHHHHHh-cccCCChHHHHHHHHHHhCcHHHHHHHH
Confidence 1223468999999999999777776 9998888 788887665441 11223333333333343333 3445555
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccc
Q 013079 307 KEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLG 386 (450)
Q Consensus 307 ~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G 386 (450)
+++.++++++.+.|++++.....+. ..|.++++.++.......+.+.+.. .| +.+..+
T Consensus 262 ~~~~~~~~~l~~~L~~~~~~~~~~~------------------~~g~~~~~~~~~~~~~~~~~~~l~~---~g-i~i~~~ 319 (350)
T cd00609 262 ERYRRRRDALLEALKELGPLVVVKP------------------SGGFFLWLDLPEGDDEEFLERLLLE---AG-VVVRPG 319 (350)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCC------------------CccEEEEEecCCCChHHHHHHHHHh---CC-EEEecc
Confidence 6678889999999988765321111 2466888888754334445555553 23 444433
Q ss_pred cccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 387 YYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 387 ~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
..... .....|||+++ .. .+.++.+.++|+
T Consensus 320 ~~~~~---------------------~~~~~iRi~~~-~~--~~~i~~~~~al~ 349 (350)
T cd00609 320 SAFGE---------------------GGEGFVRLSFA-TP--EEELEEALERLA 349 (350)
T ss_pred ccccc---------------------CCCCeEEEEee-CC--HHHHHHHHHHhh
Confidence 22110 12578999999 66 666777766664
No 190
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.92 E-value=1.9e-23 Score=211.38 Aligned_cols=318 Identities=13% Similarity=0.087 Sum_probs=199.4
Q ss_pred ccCccccCCH-HHHHHhhcCCCCCCC-CCccccCCC-ChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhc
Q 013079 64 ASATFTVMEP-ETMRRMFAGELGPDR-DFFIYSRHF-NPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLC 138 (450)
Q Consensus 64 ~att~~~~~~-~~~~~~~~~~~~n~~-~~~~y~r~~-~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~ 138 (450)
+|+++..+.+ +++.+++. .++++. ..|..++.. ....+.++ ++ +++|++ +++||+| +|+++++++.+++
T Consensus 34 ~a~g~~p~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~l~g~~~~~v~~~~~---~t~~l~~~~~~~~ 107 (406)
T TIGR01814 34 NSLGLMPKAARNALKEELD-KWAKIAIRGHNTGKAPWFTLDESLL-KL-RLVGAKEDEVVVMNT---LTINLHLLLASFY 107 (406)
T ss_pred CCcCcCcHHHHHHHHHHHH-HHHHhhhccCccCCCChhhhhhhhc-cc-cccCCCCCcEEEeCC---chHHHHHHHHHhc
Confidence 4455542333 55555443 344433 345443333 22333443 45 788864 6899999 9999999999876
Q ss_pred cCC---CEEEEeCCCchhHHHHHHHhCCCccCeeE----EEeCCC-----CHHHHHHhhh--cCCceEEEEecCCCCccc
Q 013079 139 SSG---GHVVAARTLYGGTHALLTHFFPRACNITT----TFVDIS-----DHEMVNSAIV--QGRTKVLYFESISNPTLA 204 (450)
Q Consensus 139 ~~g---d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v----~~v~~~-----d~~~l~~ai~--~~~t~lv~i~~~~NptG~ 204 (450)
+++ +.|+++..+|++....+.....+ .|+++ ..++.+ |++++++++. .++|++|++++++|.||.
T Consensus 108 ~~~~~~~~i~~~~~~~~s~~~~~~~~~~~-~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~ 186 (406)
T TIGR01814 108 KPTPKRYKILLEAKAFPSDHYAIESQLQL-HGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQ 186 (406)
T ss_pred CCcCCccEEEecCCCCChHHHHHHHHHHh-cCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccce
Confidence 654 26888889999877665433333 57665 344432 7788887762 368999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccc-cCccceEEEEEcCHHHHHHHHHHhhhh--
Q 013079 205 VANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFIS-GGADIIAGAVCGPANLVNSMMDLHQGA-- 279 (450)
Q Consensus 205 v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g-~~g~~igG~l~~~~~~~~~l~~~~~~~-- 279 (450)
++|+++|+++|+++|+++++|++| +.+.++..++++|+++.|.||+++ ++| +|+++.++.. ..+.....++
T Consensus 187 ~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG---~~l~v~~~~~-~~~~p~~~g~~~ 262 (406)
T TIGR01814 187 LFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG---AGAFVHEKHA-HTERPRLAGWWG 262 (406)
T ss_pred ecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC---eEEEEehhhh-hhcCCCCCcccC
Confidence 999999999999999999999998 556677777899999999999874 555 3544444332 1221110000
Q ss_pred ------------------hhccCCCchHHHHHH---HHccC--CcHHHHHHHHHHHHHHHHHHHHhC-C----CeeeCCC
Q 013079 280 ------------------LMLLGPTMNPKVAFE---LSERI--PHLGLRMKEHCHRALIFARRMKKL-G----LKVLYPG 331 (450)
Q Consensus 280 ------------------~~~~g~~~~~~~a~~---~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~-~----~~v~~p~ 331 (450)
....| +++....+. ++..+ ..+....++...+.+++.+.|++. + .++..|.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~G-T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~ 341 (406)
T TIGR01814 263 HARPTRFKMDNTLGLIPCGFRIS-NPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPR 341 (406)
T ss_pred CCCccccccccccCCCccceeeC-CccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCC
Confidence 00112 222222111 22111 123444556677788888888764 2 3444432
Q ss_pred CCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhc
Q 013079 332 LEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALA 411 (450)
Q Consensus 332 ~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~ 411 (450)
.+. ..+++++|.++ . ....+...|... | +.++.
T Consensus 342 ---~~~------------~r~~~v~~~~~-~-~~~~~~~~L~~~---g-i~v~~-------------------------- 374 (406)
T TIGR01814 342 ---DHA------------QRGCQLSLTHP-V-PGKAVFQALIKR---G-VIGDK-------------------------- 374 (406)
T ss_pred ---Chh------------hcCCeEEEEec-C-CHHHHHHHHHHC---C-EEEec--------------------------
Confidence 111 24668899887 2 245566666542 2 33211
Q ss_pred CCCCCeEEEEe-CCCCCHHHHHHHHHHHHHHh
Q 013079 412 GISAGLVRMSV-GYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 412 g~~~~~iRiS~-g~~~~~~~~i~~l~~al~~~ 442 (450)
...+.||||+ + ..+++++++.+.++|+++
T Consensus 375 -~~~~~iRiS~~~-~~nt~~did~l~~~l~~~ 404 (406)
T TIGR01814 375 -REPSVIRVAPVP-LYNTFVDVYDAVNVLEEI 404 (406)
T ss_pred -cCCCeEEEechh-ccCCHHHHHHHHHHHHHH
Confidence 0136899999 6 688899999999988765
No 191
>PRK08637 hypothetical protein; Provisional
Probab=99.92 E-value=1.4e-22 Score=203.74 Aligned_cols=255 Identities=14% Similarity=0.097 Sum_probs=166.3
Q ss_pred CCccccCCCChhHHHHHHHHHHHhC-------C---CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHH
Q 013079 89 DFFIYSRHFNPTVLNLSRQMAALEG-------T---EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALL 158 (450)
Q Consensus 89 ~~~~y~r~~~~~~~~l~~~iA~l~g-------~---~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~ 158 (450)
..+.|+. ......||+.+++.+. . +++++|+| +++++.+++..++++||+|++++|.|+.+...+
T Consensus 36 ~~~~Y~~--~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G---~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~ 110 (388)
T PRK08637 36 EIFPYAP--PQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNA---LTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTF 110 (388)
T ss_pred cccCCCC--CCCCHHHHHHHHHHHhccCccccccccceeeEccc---hHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHH
Confidence 3455653 2335667777776541 1 35699999 999999999999999999999999999988764
Q ss_pred HHhCCCccCeeEEEeCC--C----CHHHHHHhhh---cCCceEEEEecCCCCcccccC---HHHHHHHHHh-----cCCE
Q 013079 159 THFFPRACNITTTFVDI--S----DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN---IPELSRLAHD-----KGVT 221 (450)
Q Consensus 159 ~~~~~~~~g~~v~~v~~--~----d~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~-----~gi~ 221 (450)
.. ..|.++..++. + |++++++++. .+.++++++++||||||.+.+ +++|+++|++ ++++
T Consensus 111 ~~----~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~ 186 (388)
T PRK08637 111 NT----RRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVV 186 (388)
T ss_pred HH----hcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEE
Confidence 31 14777777664 2 7899988873 145567778899999999976 6677777764 8999
Q ss_pred EEEeCCCCCCCCCc-------cC---C-CCe--EEEeCCCCccccCccceEEEEEc------CHHHHHHHHHHhhh---h
Q 013079 222 VVVDNTFSPLVLSP-------AR---L-GAD--VVVHSISKFISGGADIIAGAVCG------PANLVNSMMDLHQG---A 279 (450)
Q Consensus 222 livD~~~~~~~~~~-------~~---~-g~d--i~~~S~sK~~g~~g~~igG~l~~------~~~~~~~l~~~~~~---~ 279 (450)
+|+|++|..+.++. .. . +.. +.+.|+||.++.+|+|+ ||++. ++++.+.+...... .
T Consensus 187 iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRl-G~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 265 (388)
T PRK08637 187 AVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRV-GFITFGTKAGSSQTVKEALEKKVKGLIRS 265 (388)
T ss_pred EEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccce-EEEEEccccCCcHHHHHHHHHHHHHHhhc
Confidence 99999996654321 11 1 222 34469999999999999 99874 35777766532110 0
Q ss_pred hhccCCCchHHHHHHHHccCCc---HHHHHHHHHHHHHHHHHHHHhCCC----eeeCCCCCCCchhHHHHHHhccCCCcC
Q 013079 280 LMLLGPTMNPKVAFELSERIPH---LGLRMKEHCHRALIFARRMKKLGL----KVLYPGLEDHPHHELLKSMANKEYGFG 352 (450)
Q Consensus 280 ~~~~g~~~~~~~a~~~~~~~~~---l~~~~~~~~~~~~~l~~~L~~~~~----~v~~p~~~~~p~~~l~~~~~~~~~g~g 352 (450)
.....+.+.+.++..++..... +.+....++++++.+.+.|++++. .+..| ..|
T Consensus 266 ~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~-------------------~~g 326 (388)
T PRK08637 266 NISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPF-------------------NSG 326 (388)
T ss_pred ccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc-------------------cce
Confidence 1123345555555444433222 122233456666677777866531 22111 246
Q ss_pred cEEEEEeCCHHHHHHHHHHhh
Q 013079 353 GLLCLDMETEEKANRLMNYLQ 373 (450)
Q Consensus 353 ~~~~~~l~~~~~~~~~~~~l~ 373 (450)
.++|+.+++. ...+|.+.+.
T Consensus 327 ~~~~~~l~~~-~~~~l~~~l~ 346 (388)
T PRK08637 327 YFMCLKLKGV-DAEELRVHLL 346 (388)
T ss_pred EEEEecCChH-HHHHHHHHHh
Confidence 6888888743 3567777763
No 192
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.92 E-value=3.6e-23 Score=208.69 Aligned_cols=215 Identities=15% Similarity=0.109 Sum_probs=150.3
Q ss_pred hHHHHHHHHHHHhC--------CCeE--EEecChHHHHHHHHHHHHHh--ccCCCEEEEeCCCchhHHHHHHHhCCCccC
Q 013079 100 TVLNLSRQMAALEG--------TEAA--YCTASDKAGMSAISSVLMQL--CSSGGHVVAARTLYGGTHALLTHFFPRACN 167 (450)
Q Consensus 100 ~~~~l~~~iA~l~g--------~~~~--~~tsg~~~gt~ai~~al~~l--~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g 167 (450)
...++|+.+|+++. .+++ ++|+| +++|+.++++.+ +.+||.|++++|.|+.+...+. ..|
T Consensus 70 G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~G---a~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~-----~~g 141 (396)
T PRK09257 70 GLAAYRQAVQELLFGADSPALAAGRVATVQTPG---GTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFE-----AAG 141 (396)
T ss_pred CCHHHHHHHHHHhcCCCCcccccCeEEEEecCC---ccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHH-----HcC
Confidence 34567777777642 3445 89999 999999998665 4799999999999999998886 357
Q ss_pred eeEEEeCC-------CCHHHHHHhhhc--CCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCc
Q 013079 168 ITTTFVDI-------SDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSP 235 (450)
Q Consensus 168 ~~v~~v~~-------~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~ 235 (450)
.+++.++. .|++++++++.. .+++++++++||||||.+.+ +++|+++|+++++++|+|++|..+.++.
T Consensus 142 ~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~ 221 (396)
T PRK09257 142 LEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGL 221 (396)
T ss_pred CcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccch
Confidence 77776653 178899888732 34567777999999999975 6788999999999999999996665321
Q ss_pred ----------cCC-CCeEEEeCCCCccccCccceEEEEE--c-CHHHHH----HHHHHhhhhhhccCCCchHHHHHHHHc
Q 013079 236 ----------ARL-GADVVVHSISKFISGGADIIAGAVC--G-PANLVN----SMMDLHQGALMLLGPTMNPKVAFELSE 297 (450)
Q Consensus 236 ----------~~~-g~di~~~S~sK~~g~~g~~igG~l~--~-~~~~~~----~l~~~~~~~~~~~g~~~~~~~a~~~~~ 297 (450)
... ...++++|+||.++++|+|+ ||++ . +++.+. .+..... ......+.+.+..+...+.
T Consensus 222 ~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRi-G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~ 299 (396)
T PRK09257 222 EEDAYGLRAFAAAGLELLVASSFSKNFGLYGERV-GALSVVAEDAEEADRVLSQLKATIR-TNYSNPPAHGAAIVATILN 299 (396)
T ss_pred HHHHHHHHHHHhcCCcEEEEEEcCCcCccccccc-eeEEEEeCCHHHHHHHHHHHHHHhh-hhcCCCcHHHHHHHHHHhC
Confidence 111 35789999999999999999 9986 2 444333 3322221 1011123333334433333
Q ss_pred cC-------CcHHHHHHHHHHHHHHHHHHHHhCC
Q 013079 298 RI-------PHLGLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 298 ~~-------~~l~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
.. +++....+++.++++.+.+.|++++
T Consensus 300 ~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~ 333 (396)
T PRK09257 300 DPELRAEWEAELEEMRERIKAMRQLLVEALKAKG 333 (396)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 21 2233455667888999999998864
No 193
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.92 E-value=8.2e-23 Score=204.50 Aligned_cols=309 Identities=12% Similarity=0.134 Sum_probs=206.5
Q ss_pred CccccCC-HHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhc----
Q 013079 66 ATFTVME-PETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLC---- 138 (450)
Q Consensus 66 tt~~~~~-~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~---- 138 (450)
.+.+.+. .+.+..+++..++++. . |. ......+++++.||+++|++ .+++++| |++++..++.++.
T Consensus 29 ~~~~~~~~~~a~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~~la~~~g~~~~~~~~~~g---~~~~~~~~~~~~~~~~~ 101 (373)
T TIGR03812 29 CTNPHPIAVKAYDMFIETNLGDPG-L--FP-GTKKIEEEVVGSLGNLLHLPDAYGYIVSG---GTEANIQAVRAAKNLAR 101 (373)
T ss_pred eCCchHHHHHHHHHHhhcCCCCcc-c--Cc-cHHHHHHHHHHHHHHHhCCCCCCeEEecc---HHHHHHHHHHHHHHHHh
Confidence 3334444 4666666665566653 1 22 23455689999999999975 4688999 9999988876653
Q ss_pred --cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHH
Q 013079 139 --SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 211 (450)
Q Consensus 139 --~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I 211 (450)
.+||+|++++++|.++...++ ..|+++..++.+ |++++++++ ++++..+++.+++||||.+.|+++|
T Consensus 102 ~~~~g~~vl~~~~~h~~~~~~~~-----~~G~~~~~v~~~~~~~~d~~~l~~~l-~~~~~~vv~~~~~~~tG~~~~~~~i 175 (373)
T TIGR03812 102 EEKRTPNIIVPESAHFSFEKAAE-----MLGLELRYAPLDEDYTVDVKDVEDLI-DDNTIGIVGIAGTTELGQIDDIEEL 175 (373)
T ss_pred ccCCCcEEEECCcchHHHHHHHH-----HcCCeEEEEeeCCCCCcCHHHHHHHH-hhCcEEEEEECCCCCCCccCCHHHH
Confidence 367899999999998776664 368888887753 899999998 6677544444579999999999999
Q ss_pred HHHHHhcCCEEEEeCCCCCCC------------CCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhh
Q 013079 212 SRLAHDKGVTVVVDNTFSPLV------------LSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGA 279 (450)
Q Consensus 212 ~~la~~~gi~livD~~~~~~~------------~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~ 279 (450)
.++|+++|+++|+|++|+.+. .+....++|.++.|.||+.. .+.+.||+++.++++++.+..... +
T Consensus 176 ~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~-~~~~~G~~~~~~~~~~~~l~~~~~-~ 253 (373)
T TIGR03812 176 SKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGL-SPIPAGGILFRSKSYLKYLSVDAP-Y 253 (373)
T ss_pred HHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCC-CcCCceEEEEeCHHHHhhhcccCc-c
Confidence 999999999999999984321 11112378999999999543 334455666778877776632111 1
Q ss_pred hhc------cCCC--chHHHHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCC
Q 013079 280 LML------LGPT--MNPKVAFELSERI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEY 349 (450)
Q Consensus 280 ~~~------~g~~--~~~~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~ 349 (450)
... .|.. .....+..++..+ +.++...++..++++++.+.|++++.....+.
T Consensus 254 ~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~------------------ 315 (373)
T TIGR03812 254 LTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEP------------------ 315 (373)
T ss_pred cCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCC------------------
Confidence 000 0111 1122222233222 23455667788999999999998876433321
Q ss_pred CcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHH
Q 013079 350 GFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLD 429 (450)
Q Consensus 350 g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~ 429 (450)
..+++.|.+++. ..+.+.|... | +.++.+. .+..||||++ ..+++
T Consensus 316 -~~~~v~~~~~~~---~~v~~~L~~~---g-i~v~~~~--------------------------~~~~iRis~~-~~~t~ 360 (373)
T TIGR03812 316 -VLNIVAFEVDDP---EEVRKKLRDR---G-WYVSVTR--------------------------CPKALRIVVM-PHVTR 360 (373)
T ss_pred -CceEEEEEeCCH---HHHHHHHHHC---C-ceeccCC--------------------------CCCEEEEEEE-CCCCH
Confidence 234788888753 3566666542 2 3333210 1468999999 88889
Q ss_pred HHHHHHHHHHHHh
Q 013079 430 QRWSQFEKALSRM 442 (450)
Q Consensus 430 ~~i~~l~~al~~~ 442 (450)
+.++.+.++|+++
T Consensus 361 edid~l~~~L~~~ 373 (373)
T TIGR03812 361 EHIEEFLEDLKEI 373 (373)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999988753
No 194
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=5.4e-23 Score=204.47 Aligned_cols=296 Identities=15% Similarity=0.127 Sum_probs=191.9
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCC---------------EEEEeCCCchhHHHHHHHh
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGG---------------HVVAARTLYGGTHALLTHF 161 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd---------------~Vi~~~~~y~~~~~~~~~~ 161 (450)
..+.++++++.+|+++|++.+++|+| +|+|+++++.+++++|| +||++.|.|..+...+...
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~~~~~~g---~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~ 119 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVEDAVIVSS---ASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETM 119 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcC---HHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHH
Confidence 45778999999999999999999999 99999999999999888 8898886665442111111
Q ss_pred CCCccCeeEEEeCCC---CHHHHHHhhhcCCceEEE-EecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCccC
Q 013079 162 FPRACNITTTFVDIS---DHEMVNSAIVQGRTKVLY-FESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSPAR 237 (450)
Q Consensus 162 ~~~~~g~~v~~v~~~---d~~~l~~ai~~~~t~lv~-i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~~~ 237 (450)
.. ..|.++++++.+ |++++++++ +++|++++ +++++||+|.+.|+++|+++|+++|+++|+|++|+........
T Consensus 120 ~~-~~g~~~v~v~~~~~~d~~~le~ai-~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~~~~~ 197 (363)
T TIGR01437 120 VR-LGGGKVVEAGYANECSAEQLEAAI-TEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQKYYR 197 (363)
T ss_pred HH-hcCCeEEEEcCCCCCCHHHHHHhc-ChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCchHHHHH
Confidence 11 368788887653 899999999 88999665 6788999999999999999999999999999999521122345
Q ss_pred CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhcc-CCCchHHHHHHHHcc-CCcHHHHHHHHHHHHHH
Q 013079 238 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLL-GPTMNPKVAFELSER-IPHLGLRMKEHCHRALI 315 (450)
Q Consensus 238 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~-g~~~~~~~a~~~~~~-~~~l~~~~~~~~~~~~~ 315 (450)
+|+|++++|+||+++++ + +|+++.++++++.+.....+..... ...........++.. .+...+..+++.++++.
T Consensus 198 ~g~D~~~~S~~K~l~gp--~-~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~ 274 (363)
T TIGR01437 198 LGADLVIYSGAKAIEGP--T-SGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTP 274 (363)
T ss_pred cCCCEEEEeCCcccCCC--c-eEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHH
Confidence 68999999999987644 4 4999888888877643322110000 000111111111111 12222334445556778
Q ss_pred HHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--CHHHHHHHHHHhhccccccccccccccccccc
Q 013079 316 FARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--TEEKANRLMNYLQNYAQFGFMAVSLGYYETLM 392 (450)
Q Consensus 316 l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~ 392 (450)
+.+.|++++. .+..+. + .....+ .-..+.|... +. ....+.+.|...+ +.+..-
T Consensus 275 l~~~L~~i~g~~~~~~~-~-~~~~~~----------~~~~v~~~~~~~g~-~~~~l~~~L~~~~----~~I~~r------ 331 (363)
T TIGR01437 275 FIEALNTLKGVSASIVQ-D-EAGRDI----------ARAEIRFDESELGM-TAADVVQALRQGE----PAIYTR------ 331 (363)
T ss_pred HHHHHhcCCCeEEEEec-C-CCCCcC----------ceEEEEEeccCCCC-CHHHHHHHHhcCC----CCEEEe------
Confidence 9999988743 443221 0 000000 0123555542 22 3567777775311 111110
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 393 SCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
+ .....+.+||++. .-+ +++++.|.++|.++
T Consensus 332 --~---------------~~~~~~~~~l~~~-~~~-~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 332 --G---------------YKANEGIIEIDPR-SVT-GGQLDIIVERIREI 362 (363)
T ss_pred --e---------------eeecCCeEEEEee-cCC-HHHHHHHHHHHHHh
Confidence 0 1233678999999 655 77889998888764
No 195
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.92 E-value=4.9e-23 Score=210.69 Aligned_cols=335 Identities=14% Similarity=0.126 Sum_probs=214.5
Q ss_pred ccccccCccccCCH-HHHHHhhcCCC--CCCCCCccccCCCChhHHH-HHHHHHHHhCCCe--EEEe---cChHHHHHHH
Q 013079 60 MSIEASATFTVMEP-ETMRRMFAGEL--GPDRDFFIYSRHFNPTVLN-LSRQMAALEGTEA--AYCT---ASDKAGMSAI 130 (450)
Q Consensus 60 ~pi~~att~~~~~~-~~~~~~~~~~~--~n~~~~~~y~r~~~~~~~~-l~~~iA~l~g~~~--~~~t---sg~~~gt~ai 130 (450)
-++.+|.+++.+.+ +.+...+...| |||++.|..|......+++ .++++++++|++. ..++ +| |++|+
T Consensus 37 l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~s---gt~an 113 (452)
T PTZ00094 37 LELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYS---GSPAN 113 (452)
T ss_pred eeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCc---hHHHH
Confidence 35678888888775 88888888888 9999999888877777774 7889999999864 3466 78 99999
Q ss_pred HHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCC-----ccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCC
Q 013079 131 SSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPR-----ACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISN 200 (450)
Q Consensus 131 ~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~-----~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~N 200 (450)
.+++.+++++||+|+++..+|++....+...... ..++++..++.+ |+++|++++...++++|++. ++
T Consensus 114 ~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s 191 (452)
T PTZ00094 114 FAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--AS 191 (452)
T ss_pred HHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CC
Confidence 9999999999999999999998876554211100 012344444433 89999999843467777763 45
Q ss_pred CcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCC----ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHH
Q 013079 201 PTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLS----PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD 274 (450)
Q Consensus 201 ptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~----~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~ 274 (450)
.+|.++|+++|.++|+++|+++++|++| +.+..+ +. .++|++++|+||++++|. ||+++.++++.+.+..
T Consensus 192 ~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~-~~~D~l~~S~hK~l~GP~---Gg~l~~~~~~~~~l~~ 267 (452)
T PTZ00094 192 AYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF-PYADVVTTTTHKSLRGPR---SGLIFYRKKVKPDIEN 267 (452)
T ss_pred CCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC-CCCcEEEcCCccCCCCCC---ceEEEEecccchHHHH
Confidence 6999999999999999999999999998 333332 22 279999999999885454 3666555544433322
Q ss_pred Hhhh-hh-hccCCC-chHHHHHH-HHccC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccC
Q 013079 275 LHQG-AL-MLLGPT-MNPKVAFE-LSERI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKE 348 (450)
Q Consensus 275 ~~~~-~~-~~~g~~-~~~~~a~~-~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~ 348 (450)
.... .. ...|+. ....++.. ++..+ .......++..++++++.+.|++.+.++..++-..
T Consensus 268 ~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~~-------------- 333 (452)
T PTZ00094 268 KINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTDN-------------- 333 (452)
T ss_pred hhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCCC--------------
Confidence 1110 00 011222 11111111 22222 22334556678899999999988777666543111
Q ss_pred CCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccc-ccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC
Q 013079 349 YGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSL-GYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT 427 (450)
Q Consensus 349 ~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~-G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~ 427 (450)
.-.++.|..++.. ...+...|.. .| |.++. |-.| +. ....++.||+|++ ..+
T Consensus 334 --~~~~v~~~~~~~~-~~~~~~~L~~---~g-I~vs~~~~p~------~~-------------~~~~~~~vRis~~-~~t 386 (452)
T PTZ00094 334 --HLVLVDLRPFGIT-GSKMEKLLDA---VN-ISVNKNTIPG------DK-------------SALNPSGVRLGTP-ALT 386 (452)
T ss_pred --ceEeecCCcCCCC-HHHHHHHHHH---CC-cEEecccCCC------CC-------------cCCCCCeEEECCH-HHH
Confidence 1124445444322 3445555543 22 45441 1111 00 0122578999998 655
Q ss_pred H----HHHHHHHHHHHHHhhh
Q 013079 428 L----DQRWSQFEKALSRMQD 444 (450)
Q Consensus 428 ~----~~~i~~l~~al~~~~~ 444 (450)
+ +++++.+.++|.++..
T Consensus 387 t~g~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 387 TRGAKEKDFKFVADFLDRAVK 407 (452)
T ss_pred hCCCCHHHHHHHHHHHHHHHH
Confidence 5 7778888777776544
No 196
>PLN02672 methionine S-methyltransferase
Probab=99.92 E-value=1.1e-22 Score=220.10 Aligned_cols=218 Identities=15% Similarity=0.143 Sum_probs=161.7
Q ss_pred hHHHHHHHHHHHhCC-----CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 100 TVLNLSRQMAALEGT-----EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 100 ~~~~l~~~iA~l~g~-----~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
..+.+++.+++..|. +.+++|+| +++++..++.+++++||+|+++.|+|+.+...+. ..|.++..++
T Consensus 735 lr~aLa~~la~~~Gv~~d~~e~IIvt~G---s~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~-----~~Ga~vv~Vp 806 (1082)
T PLN02672 735 PRPSILQFIKSNYGFPTDSCTEFVYGDT---SLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAK-----FLKANFRRIP 806 (1082)
T ss_pred HHHHHHHHHHHHhCcCCCCCCEEEEeCC---HHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHH-----HcCCEEEEEe
Confidence 467888889888764 25889999 9999999999999999999999999999998875 3677777776
Q ss_pred CC-------CHHHHHHhhhcC-CceEEEEecCC-CCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCCcc------
Q 013079 175 IS-------DHEMVNSAIVQG-RTKVLYFESIS-NPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLSPA------ 236 (450)
Q Consensus 175 ~~-------d~~~l~~ai~~~-~t~lv~i~~~~-NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~~~------ 236 (450)
.+ |++++++++ ++ +.++|++++|| ||||.+.+ +++|+++|++||++||+|++|..+.++..
T Consensus 807 l~~e~gf~lD~d~Le~al-~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~s 885 (1082)
T PLN02672 807 TKSSDGFKLTAKTLASTL-ETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWD 885 (1082)
T ss_pred cccccCCCCCHHHHHHHh-ccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccc
Confidence 53 678899988 54 45689999997 99999965 77888899999999999999965544211
Q ss_pred ------CC------CCeEEEeCCCCccccCccceEEEEEcCH-HHHHHHHHHhhhhhhccCCCchHHHHHHHHc-----c
Q 013079 237 ------RL------GADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQGALMLLGPTMNPKVAFELSE-----R 298 (450)
Q Consensus 237 ------~~------g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-----~ 298 (450)
.+ ...++++|+||.++++|+|+ ||+++++ ++++.+..... . .......+.++..++. .
T Consensus 886 l~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRI-GylIap~~eLi~~l~~~~~-~--s~~~~~~q~Aaaaalall~~~~ 961 (1082)
T PLN02672 886 LKSILSRLKSSNPSFAVALLGGLSTELLSGGHEF-GFLALNDSVLIDAFHSAPG-L--SRPHSTLKYTIKKLLGLKNQKS 961 (1082)
T ss_pred hhhHHHHhccccCCceEEEEeCcHHhhccHHHHh-eeEEeCCHHHHHHHHHhhh-h--cCCCcHHHHHHHHHHHHHhccC
Confidence 00 14688999999999999999 9999864 58888866432 1 1122233333322221 1
Q ss_pred C---CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 013079 299 I---PHLGLRMKEHCHRALIFARRMKKLGLKVLYP 330 (450)
Q Consensus 299 ~---~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p 330 (450)
. +++.+..+.+.++++++.+.|+++++.+..|
T Consensus 962 ~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~P 996 (1082)
T PLN02672 962 SDLLDGVAEQKKILKSRAERLKETLEACGWDVLEP 996 (1082)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecC
Confidence 1 1233445557889999999999987665444
No 197
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.92 E-value=1.1e-22 Score=207.82 Aligned_cols=144 Identities=13% Similarity=0.208 Sum_probs=116.7
Q ss_pred eEEEecChHHHHHHHHHHHHH-----hccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC------------CCH
Q 013079 116 AAYCTASDKAGMSAISSVLMQ-----LCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI------------SDH 178 (450)
Q Consensus 116 ~~~~tsg~~~gt~ai~~al~~-----l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~------------~d~ 178 (450)
++++|+| +++|+..++.+ ++.+||+|++..|.|+.+...+. .. . .|.+++.++. .|+
T Consensus 157 ~V~it~G---at~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~-l~-~-~g~~vv~i~~~~~~~~g~~~~~~d~ 230 (521)
T TIGR03801 157 DLFAVEG---GTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE-LP-R-YDFEVVRIKADEMTEDGTHTWQYPD 230 (521)
T ss_pred eEEEeCC---HHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH-Hh-c-CCcEEEEeecccccccccccCCCCH
Confidence 6899999 99999998876 68999999999999999987753 21 1 3566655543 156
Q ss_pred HHHHHhhhcCCceEEEEecCCCCcccccC---HHHHHHHHHhc--CCEEEEeCCCCCCCCCccC---C--CCeEEEeCCC
Q 013079 179 EMVNSAIVQGRTKVLYFESISNPTLAVAN---IPELSRLAHDK--GVTVVVDNTFSPLVLSPAR---L--GADVVVHSIS 248 (450)
Q Consensus 179 ~~l~~ai~~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~--gi~livD~~~~~~~~~~~~---~--g~di~~~S~s 248 (450)
+++++++ ++++++|++++||||||.+.+ +++|+++|+++ +++||+|++|..+..+... . ...+++.|+|
T Consensus 231 ~~l~~~~-~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfS 309 (521)
T TIGR03801 231 KELEKLR-DPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFS 309 (521)
T ss_pred HHHHHhc-CCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcch
Confidence 8888877 789999999999999999977 77888889886 9999999999655432211 1 3679999999
Q ss_pred CccccCccceEEEEEcCHH
Q 013079 249 KFISGGADIIAGAVCGPAN 267 (450)
Q Consensus 249 K~~g~~g~~igG~l~~~~~ 267 (450)
|.+|++|+|+ ||++.+++
T Consensus 310 K~fg~~G~Rl-G~i~~~~~ 327 (521)
T TIGR03801 310 KYFGATGWRL-GTIALHKD 327 (521)
T ss_pred hhccCchhhh-hhhhcCch
Confidence 9999999999 99988754
No 198
>PLN03032 serine decarboxylase; Provisional
Probab=99.92 E-value=6.1e-23 Score=202.63 Aligned_cols=244 Identities=15% Similarity=0.108 Sum_probs=184.5
Q ss_pred CCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC--eE--EEecChHHHHHHHHHHHHHhc--cCCCEE
Q 013079 71 MEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--AA--YCTASDKAGMSAISSVLMQLC--SSGGHV 144 (450)
Q Consensus 71 ~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~--~~--~~tsg~~~gt~ai~~al~~l~--~~gd~V 144 (450)
..++.|.+++...+|||++.|.||+.+....+++++.+|+++|.+ .+ +||+| |||||..++.+.. .++++|
T Consensus 38 ~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsG---GTEaNl~al~~ar~~~~~~~v 114 (374)
T PLN03032 38 GELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTC---GTEGNLHGILVGREVFPDGIL 114 (374)
T ss_pred HHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCc---hHHHHHHHHHHHHHhCCCcEE
Confidence 357889999888899999999999999999999999999999974 34 99999 9999999987653 245689
Q ss_pred EEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcC---CceEEEEecCCCCcccccCHHHHHHHHH
Q 013079 145 VAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQG---RTKVLYFESISNPTLAVANIPELSRLAH 216 (450)
Q Consensus 145 i~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~---~t~lv~i~~~~NptG~v~~l~~I~~la~ 216 (450)
+++..+|.++...+. . +|+.++.++.+ |+++|+++| ++ ++.+|+++..+|++|.+.|+++|+++|+
T Consensus 115 i~s~~~H~Sv~kaa~-~----lg~~~~~V~~d~~g~id~~~L~~~i-~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~ 188 (374)
T PLN03032 115 YASRESHYSVFKAAR-M----YRMEAVKVPTLPSGEIDYDDLERAL-AKNRDKPAILNVNIGTTVKGAVDDLDRILRILK 188 (374)
T ss_pred EeCCCceeHHHHHHH-H----cCCCCeEeeeCCCCcCcHHHHHHHH-HHcCCCCEEEEEEecCcCCccCCCHHHHHHHHH
Confidence 999999999998875 2 34445555544 899999999 44 5778999999999999999999999999
Q ss_pred hcC-----CEEEEeCCCCCC--CC-------CccCCCCeEEEeCCCCccc-cCccceEEEEEcCHHHHHHHHHHhh----
Q 013079 217 DKG-----VTVVVDNTFSPL--VL-------SPARLGADVVVHSISKFIS-GGADIIAGAVCGPANLVNSMMDLHQ---- 277 (450)
Q Consensus 217 ~~g-----i~livD~~~~~~--~~-------~~~~~g~di~~~S~sK~~g-~~g~~igG~l~~~~~~~~~l~~~~~---- 277 (450)
++| +++|+|++|+.. .+ +. ..++|.++.|.||+++ |.| + |+++.++..++.+.....
T Consensus 189 ~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~-~~~vDSis~s~HK~~g~P~g--~-G~ll~r~~~~~~~~~~~~Yl~~ 264 (374)
T PLN03032 189 ELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF-RKPIGSVSVSGHKFLGCPMP--C-GVALTRKKHVKALSQNVEYLNS 264 (374)
T ss_pred HhCCCCCCeeEEEEccchhhhhhccCCCcccCC-CcCCcEEEECcccccCCCcC--e-EEEEEEchhhHhhccCCcccCC
Confidence 996 589999998332 22 11 2368999999999999 666 4 777666665554421111
Q ss_pred hhhhccCCCc--hHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCCee
Q 013079 278 GALMLLGPTM--NPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGLKV 327 (450)
Q Consensus 278 ~~~~~~g~~~--~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v 327 (450)
...+..|+-. ....+|..++ +.+.+.+++++..++++++.+.|++.+..+
T Consensus 265 ~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~ 318 (374)
T PLN03032 265 RDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTC 318 (374)
T ss_pred CCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 0011223222 2344444443 445677888889999999999999887643
No 199
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.92 E-value=3.8e-22 Score=199.33 Aligned_cols=307 Identities=14% Similarity=0.116 Sum_probs=192.9
Q ss_pred cCccccCC-HHHHHHhhcCCCCCCCC-CccccCC----CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc
Q 013079 65 SATFTVME-PETMRRMFAGELGPDRD-FFIYSRH----FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC 138 (450)
Q Consensus 65 att~~~~~-~~~~~~~~~~~~~n~~~-~~~y~r~----~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~ 138 (450)
+++++.+. .+++.++..+. |++ .|..|.. ..+..+++|++||+++|++.++++++ |+.|+..++..+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~---p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~s---G~~a~~~~~~~~~ 92 (370)
T PRK05937 19 RSDTLVHEVEKRYRLYCRQF---PHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPS---GYMANLGLCAHLS 92 (370)
T ss_pred CCHHHHHHHHHHHHHhcccc---CCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECC---hHHHHHHHHHHhC
Confidence 34444444 35665554433 554 6667766 67889999999999999988888888 8888876655556
Q ss_pred cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhc-----CCceEEEEecCCCCcccccCHHHHHH
Q 013079 139 SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ-----GRTKVLYFESISNPTLAVANIPELSR 213 (450)
Q Consensus 139 ~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~~l~~I~~ 213 (450)
++||.|++...+|.++...+.. . .+..+.+ +..|+++|++.+.. +++.+|++++++|++|.++|+++|.+
T Consensus 93 ~~~d~ii~d~~~H~sv~~~~~~-~---~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~ 167 (370)
T PRK05937 93 SVTDYVLWDEQVHISVVYSLSV-I---SGWHQSF-RHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIA 167 (370)
T ss_pred CCCCEEEEEhhhhHHHHHHHHH-c---CCceEEe-cCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHH
Confidence 6788888888999888887742 2 2444443 55689999998831 34668889999999999999999999
Q ss_pred HHHhcCCEEEEeCCCC--CCCCCcc----CCC---CeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccC
Q 013079 214 LAHDKGVTVVVDNTFS--PLVLSPA----RLG---ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLG 284 (450)
Q Consensus 214 la~~~gi~livD~~~~--~~~~~~~----~~g---~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g 284 (450)
+|+++|+++|+|++|+ .+..+.. .++ .++++.|+||.+|+.| +|++ ..++....+....... ...+
T Consensus 168 l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~vl-~~~~~~~~~~~~~~~~-~~s~ 242 (370)
T PRK05937 168 LSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AALL-SSSEVKQDLMLNSPPL-RYST 242 (370)
T ss_pred HHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEEE-cCHHHHHHHHHhCCCC-eecC
Confidence 9999999999999993 3443321 122 2467889999999877 2544 4455555444222111 1222
Q ss_pred CCchHHHHHHHHccCCcH----HHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 285 PTMNPKVAFELSERIPHL----GLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 285 ~~~~~~~a~~~~~~~~~l----~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+. ++..+..+...++.+ ....++..++++++.+.|... .+ +.+..|.++
T Consensus 243 ~~-~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~-----~~---------------------~~~~~i~~~ 295 (370)
T PRK05937 243 GL-PPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA-----AP---------------------GCVQPIFLP 295 (370)
T ss_pred CC-CHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC-----CC---------------------CCEEEEEeC
Confidence 22 222121111122222 222333455555555444321 01 113345666
Q ss_pred CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 361 TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
+.. ...+.+.|... | +.++. .| .| ..+.||||++ ..+++++++.+.++|.
T Consensus 296 ~~~-~~~~~~~L~~~---g-i~v~~--~~----~~------------------~~~~iRis~~-~~~t~edid~l~~~L~ 345 (370)
T PRK05937 296 GIS-EQELYSKLVET---G-IRVGV--VC----FP------------------TGPFLRVNLH-AFNTEDEVDILVSVLA 345 (370)
T ss_pred Chh-HHHHHHHHHHC---C-eeEEe--eC----CC------------------CCCEEEEEcC-CCCCHHHHHHHHHHHH
Confidence 443 45666666642 3 33331 11 11 1357999999 9899999999998888
Q ss_pred Hhhh
Q 013079 441 RMQD 444 (450)
Q Consensus 441 ~~~~ 444 (450)
++.+
T Consensus 346 ~~~~ 349 (370)
T PRK05937 346 TYLE 349 (370)
T ss_pred HHHH
Confidence 7654
No 200
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.91 E-value=8e-22 Score=195.71 Aligned_cols=304 Identities=17% Similarity=0.191 Sum_probs=204.0
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
..+...++++.+++++|.+.+++|+| |++|+++++.++ +++||+|+++.++|.++...+. ..|.++.+++.
T Consensus 16 ~~~~~~~~~~~la~~~~~~~~~~~~s---gt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~-----~~g~~~~~~~~ 87 (352)
T cd00616 16 LGPKVREFEKAFAEYLGVKYAVAVSS---GTAALHLALRALGIGPGDEVIVPSFTFVATANAIL-----LLGATPVFVDI 87 (352)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEECC---HHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHH-----HcCCeEEEEec
Confidence 35789999999999999999999999 999999999988 5899999999999999887764 25778888765
Q ss_pred C------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCCccCC--CCeEEEeC
Q 013079 176 S------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLSPARL--GADVVVHS 246 (450)
Q Consensus 176 ~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~~~~~--g~di~~~S 246 (450)
+ |++++++++ ++++++|+++ |++|.+.|+++|.++|+++|+++|+|++|+ +.......+ ..|+.+.|
T Consensus 88 ~~~~~~~d~~~l~~~i-~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S 163 (352)
T cd00616 88 DPDTYNIDPELIEAAI-TPRTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFS 163 (352)
T ss_pred CCCcCCcCHHHHHHhc-CcCCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEc
Confidence 3 789999988 7889999875 479999999999999999999999999983 222221112 25788888
Q ss_pred CC--CccccCccceEEEEEcC-HHHHHHHHHHhhhhhh---------c--cCCCchHHHHHHHHccCCcHHHHHHHHHHH
Q 013079 247 IS--KFISGGADIIAGAVCGP-ANLVNSMMDLHQGALM---------L--LGPTMNPKVAFELSERIPHLGLRMKEHCHR 312 (450)
Q Consensus 247 ~s--K~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~---------~--~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~ 312 (450)
++ |+++++. ||+++.+ +++.+.+...+.+... . ....+....+......++.++...++.+++
T Consensus 164 ~~~~K~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~ 240 (352)
T cd00616 164 FHPTKNLTTGE---GGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREI 240 (352)
T ss_pred CCCCCCCcccC---ceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 76 9995332 5777654 6777766554331110 0 112233444444444445566666777888
Q ss_pred HHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhcccccccccccccccc
Q 013079 313 ALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQNYAQFGFMAVSLGYYE 389 (450)
Q Consensus 313 ~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~~~l~~~~~~g~i~vs~G~~~ 389 (450)
.+++.+.|++++ .++..+.... .....++.|.+++ ......+.+.|... | | ..+..+
T Consensus 241 ~~~~~~~L~~~~g~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~---g-I--~~~~~~ 300 (352)
T cd00616 241 AERYKELLADLPGIRLPDVPPGV--------------KHSYHLYVIRLDPEAGESRDELIEALKEA---G-I--ETRVHY 300 (352)
T ss_pred HHHHHHHhcCCCCccCCCCCCCC--------------ceeeEEEEEEECCcCCCCHHHHHHHHHHC---C-C--Ceeeec
Confidence 899999998764 3443322100 0123478888873 23456777777642 2 3 223222
Q ss_pred ccccccccc------cCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 390 TLMSCSGSS------TSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 390 s~~~~~~~~------~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
....+.... .....+.... +..+.||++++ ...++++++.+.++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~a~~----~~~~~l~l~~~-~~~t~~di~~i~~~l~ 352 (352)
T cd00616 301 PPLHHQPPYKKLLGYPPGDLPNAED----LAERVLSLPLH-PSLTEEEIDRVIEALR 352 (352)
T ss_pred CccccCHhhhhccCCCcCCChHHHH----HHhCeEEccCC-CCCCHHHHHHHHHHhC
Confidence 211111000 0011111111 22578999999 9899999999988763
No 201
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.91 E-value=3.3e-22 Score=198.62 Aligned_cols=288 Identities=15% Similarity=0.172 Sum_probs=194.0
Q ss_pred hhHHHHHHHHHHHhCCC----eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCC-chhHH-HHHHHhCCCccCeeEEE
Q 013079 99 PTVLNLSRQMAALEGTE----AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTL-YGGTH-ALLTHFFPRACNITTTF 172 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~----~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~-y~~~~-~~~~~~~~~~~g~~v~~ 172 (450)
...+++++.+|+++|++ .+++++| |++++..++.+++.++|++++..+. |+... ..+. ..|.++..
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~---gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~-----~~g~~~~~ 102 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGS---GTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICE-----YLGIPHTD 102 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCC---cHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHH-----HcCCceEE
Confidence 67899999999999975 3568999 9999999999998888876655544 44322 2222 25777777
Q ss_pred eCCC-----CHHHHHHhhhc-CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEE
Q 013079 173 VDIS-----DHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVV 244 (450)
Q Consensus 173 v~~~-----d~~~l~~ai~~-~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~ 244 (450)
++.+ |++++++++.. +++++|++.+++|++|.+.|+++|+++|+++|+++|+|+++ +...++...+++|+++
T Consensus 103 i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~ 182 (355)
T TIGR03301 103 LNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALI 182 (355)
T ss_pred EecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEE
Confidence 6643 78999998832 35667888899999999999999999999999999999986 3334455566899999
Q ss_pred eCCCCcc-ccCccceEEEEEcCHHHHHHHHHHhh----------------hhhhccCCCchHHHHHHHHccC---CcHHH
Q 013079 245 HSISKFI-SGGADIIAGAVCGPANLVNSMMDLHQ----------------GALMLLGPTMNPKVAFELSERI---PHLGL 304 (450)
Q Consensus 245 ~S~sK~~-g~~g~~igG~l~~~~~~~~~l~~~~~----------------~~~~~~g~~~~~~~a~~~~~~~---~~l~~ 304 (450)
.|++|++ |++| + |+++.++++++.+..... +......+.....++..++..+ ..+.+
T Consensus 183 ~s~~K~l~~~~G--~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~ 259 (355)
T TIGR03301 183 ASANKCLEGVPG--F-GFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPA 259 (355)
T ss_pred ecCCcccccCCc--e-eEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHH
Confidence 9999987 5566 5 999999888877642100 0000111111112222222221 22566
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhccccccccc
Q 013079 305 RMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMA 382 (450)
Q Consensus 305 ~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~~~~~l~~~~~~g~i~ 382 (450)
..++++++++++.+.|++++.++..|... ..+.+++|.++.. .....+...|... | +.
T Consensus 260 ~~~~~~~~~~~~~~~L~~~g~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g-i~ 319 (355)
T TIGR03301 260 RIARYRRNRELLVDGLRALGFQPLLPERW----------------QSPIIVSFLYPDDPDFDFDDFYQELKER---G-FV 319 (355)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeeecCCCC----------------CCCcEEEEECCCCCcchHHHHHHHHHHC---C-EE
Confidence 67778889999999998887654433210 1344678888741 2345677777642 2 34
Q ss_pred cccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 383 VSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 383 vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
++.|+. ...+.||||+. ..++.+.++.+.++|.++
T Consensus 320 i~~~~~------------------------~~~~~iRis~~-~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 320 IYPGKL------------------------TLADTFRIGTI-GEIDAADIERLLEAIKDA 354 (355)
T ss_pred EECCcc------------------------ccccEEEEecC-CCCCHHHHHHHHHHHHhh
Confidence 443311 00267999986 556677788888777653
No 202
>PLN02822 serine palmitoyltransferase
Probab=99.91 E-value=1.2e-21 Score=201.09 Aligned_cols=291 Identities=16% Similarity=0.192 Sum_probs=196.5
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
..+...+|+++||++++.+..++.++ |..++..++.+++++||.|++....|.++...+. +.+.++.+++.+
T Consensus 152 ~~~~~~~Lee~La~~~~~~~~i~~s~---G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~-----ls~~~~~~~~~n 223 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPDSILYSY---GLSTIFSVIPAFCKKGDIIVADEGVHWGIQNGLY-----LSRSTIVYFKHN 223 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECC---HHHHHHHHHHHhCCCCCEEEEeCCccHHHHHHHH-----HcCCeEEEECCC
Confidence 45678999999999999766555555 5557888999999999999988777766655543 346688888888
Q ss_pred CHHHHHHhhhc--------CCc-eEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC--CCCCC------ccC--
Q 013079 177 DHEMVNSAIVQ--------GRT-KVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS--PLVLS------PAR-- 237 (450)
Q Consensus 177 d~~~l~~ai~~--------~~t-~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~--~~~~~------~~~-- 237 (450)
|.++++..++. +++ ++|++++++|++|.+.|+++|.++|++||+++|+||+|+ -+... ...
T Consensus 224 d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~ 303 (481)
T PLN02822 224 DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVP 303 (481)
T ss_pred CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCC
Confidence 88777766521 234 799999999999999999999999999999999999984 22210 011
Q ss_pred -CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCch--HHHHHHHHccCCcHHHHHHHHHHHHH
Q 013079 238 -LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN--PKVAFELSERIPHLGLRMKEHCHRAL 314 (450)
Q Consensus 238 -~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~--~~~a~~~~~~~~~l~~~~~~~~~~~~ 314 (450)
..+|+++.|++|.+|+.| |++++++++++.++.... ...+.++.+. +.++..++..++...+..++++++++
T Consensus 304 ~~~~dii~~s~sKalg~~G----G~i~g~~~ii~~~~~~~~-~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~ 378 (481)
T PLN02822 304 IEKIDIITAAMGHALATEG----GFCTGSARVVDHQRLSSS-GYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIA 378 (481)
T ss_pred CCCCeEEEecchhhhhhCC----eEEEcCHHHHHHHHhcCC-ceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 146899999999999765 999999999887764433 2223333222 22222333333333456677889999
Q ss_pred HHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--------HHHHHHHHHhh-ccccccccccc
Q 013079 315 IFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--------EKANRLMNYLQ-NYAQFGFMAVS 384 (450)
Q Consensus 315 ~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--------~~~~~~~~~l~-~~~~~g~i~vs 384 (450)
++.+.|++. ++.+..| +.++++.+.+++. .....|.+.|. . .| +.++
T Consensus 379 ~l~~~L~~~~g~~~~~~-------------------~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e---~G-V~v~ 435 (481)
T PLN02822 379 LLHKGLSDIPGLSIGSN-------------------TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKE---DS-VLVV 435 (481)
T ss_pred HHHHHHHhcCCcccCCC-------------------CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhc---CC-EEEE
Confidence 999999875 4443322 2456888888631 12356676664 3 23 4444
Q ss_pred cccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 385 LGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 385 ~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.+...+. . .+-.+..+||++. ...+++.++.+.++|+++
T Consensus 436 ~~~~~~~------~------------~~~~~~~lRi~is-~~~t~edI~~~~~~l~~~ 474 (481)
T PLN02822 436 VSKRSTL------D------------KCRLPVGIRLFVS-AGHTESDILKASESLKRV 474 (481)
T ss_pred eeCCCCc------C------------CCCCCCcEEEEEC-CCCCHHHHHHHHHHHHHH
Confidence 3311000 0 0111346999988 767777777777777654
No 203
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=3.2e-22 Score=201.97 Aligned_cols=288 Identities=17% Similarity=0.123 Sum_probs=192.5
Q ss_pred ChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHH-HHHHHhccC--CCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 98 NPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAIS-SVLMQLCSS--GGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~-~al~~l~~~--gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
.+.++++++.+++++|.+ .++++++ |+++.+ +++..++.+ ||+|+++++.|+++...+.....+ .|.++.+
T Consensus 63 ~~~~~~~~~~la~~~g~~~~~v~~~~~---g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~-~g~~~~~ 138 (398)
T cd00613 63 LQALFELQTMLCELTGMDVANASLQDE---ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEP-LGIEVVE 138 (398)
T ss_pred HHHHHHHHHHHHHHHCCCccceeccCc---hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhccc-CCcEEEE
Confidence 356789999999999976 6777776 554444 444445565 999999999999998887644333 5678887
Q ss_pred eCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCH-HHHHHHHHhcCCEEEEeCCCC--CCCCCccCCCCeEEE
Q 013079 173 VDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANI-PELSRLAHDKGVTVVVDNTFS--PLVLSPARLGADVVV 244 (450)
Q Consensus 173 v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l-~~I~~la~~~gi~livD~~~~--~~~~~~~~~g~di~~ 244 (450)
++.+ |++++++++ .++|++|++++++ ++|.+.|+ ++|+++|+++|+++|+|+++. ....++...++|+++
T Consensus 139 v~~~~~~~~d~~~l~~~i-~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~ 216 (398)
T cd00613 139 VPSDEGGTVDLEALKEEV-SEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVV 216 (398)
T ss_pred eccCCCCCcCHHHHHHhc-CCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEE
Confidence 7754 689999999 8889999999985 89999885 999999999999999999872 333445566899999
Q ss_pred eCCCCccccC---ccceEEEEEcCHHHHHHHHHHh---------------------------hhhh-hccCCCchHHHHH
Q 013079 245 HSISKFISGG---ADIIAGAVCGPANLVNSMMDLH---------------------------QGAL-MLLGPTMNPKVAF 293 (450)
Q Consensus 245 ~S~sK~~g~~---g~~igG~l~~~~~~~~~l~~~~---------------------------~~~~-~~~g~~~~~~~a~ 293 (450)
.|+||++++. |.+. |+++.++++++.+.... .+.. ...+.......++
T Consensus 217 ~s~~K~~~p~g~Ggp~~-g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~ 295 (398)
T cd00613 217 GNLQKTGVPHGGGGPGA-GFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAA 295 (398)
T ss_pred eeccccCCCCCCCCCce-eEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHH
Confidence 9999998321 4554 99988877766541100 0000 0111111222222
Q ss_pred HHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHH
Q 013079 294 ELSE--RIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLM 369 (450)
Q Consensus 294 ~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~ 369 (450)
..+. ....+.+..+++.++++++.+.|++++... .+. . ...+.++|.++. ......+.
T Consensus 296 ~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~--~---------------~~~~~v~~~~~~~~~~~~~~~~ 357 (398)
T cd00613 296 MYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL-PFN--G---------------PFFHEFVLRLPPLYGIRAEDLA 357 (398)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCC--C---------------CeeEEEEEEcCCcchHHHHHHH
Confidence 2222 222345566778889999999998876532 111 0 122356777764 23466777
Q ss_pred HHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013079 370 NYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 370 ~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 439 (450)
..|... | +.+.. .. + ...+.||+|+. ..+++++++.+.++|
T Consensus 358 ~~L~~~---g-i~~~~------~~-~-----------------~~~~~lRis~~-~~~t~edid~~~~~L 398 (398)
T cd00613 358 KALIDG---G-FHAPT------MY-L-----------------PVDGTLMIEPT-ETETKEELDALLEAL 398 (398)
T ss_pred Hhhhhc---C-ccccc------cc-c-----------------CCCCeEEEEcC-CCCCHHHHHHHHHhC
Confidence 777642 2 21110 00 0 01468999999 999999999987764
No 204
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.91 E-value=5e-22 Score=200.13 Aligned_cols=275 Identities=14% Similarity=0.064 Sum_probs=191.5
Q ss_pred CccccCCH-HHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC----eEEE--ecChHHHHHHHHHHHHHhc
Q 013079 66 ATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE----AAYC--TASDKAGMSAISSVLMQLC 138 (450)
Q Consensus 66 tt~~~~~~-~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~----~~~~--tsg~~~gt~ai~~al~~l~ 138 (450)
||++.+++ +.|...+...++||++ .++.. ...+++++.+|+++|.+ .+++ |+| |||||++++.+..
T Consensus 50 tt~~~p~~~~~~~~~l~~~~~np~s---~~~~~-~le~~~~~~la~llg~~~~~~~~~g~~TsG---gTEAn~~al~~ar 122 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNMIDKDE---YPQTA-EIENRCVNMLADLWHAPAKDAEAVGTSTIG---SSEAIMLGGLAMK 122 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCCCCccc---CccHH-HHHHHHHHHHHHHhCCCCCCCCCeEEEech---HHHHHHHHHHHHH
Confidence 67777765 7778888878899865 45554 78899999999999975 3544 899 9999999987643
Q ss_pred ----c----CC-----CEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC------CHHHHHHhhhcCCceEEEEecCC
Q 013079 139 ----S----SG-----GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS------DHEMVNSAIVQGRTKVLYFESIS 199 (450)
Q Consensus 139 ----~----~g-----d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~------d~~~l~~ai~~~~t~lv~i~~~~ 199 (450)
. .| .+|+++..+|.++...+. ..|+++.+++++ |+++|++++ +++|.+|+++..+
T Consensus 123 ~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~-----~lg~~v~~i~~d~~~~~vd~~~L~~~i-~~~t~lV~~t~g~ 196 (431)
T TIGR01788 123 WRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFAR-----YFDVELREVPMDPGRYVIDPEQVVEAV-DENTIGVVCILGT 196 (431)
T ss_pred HHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHH-----HcCceeEEEecCCCceeeCHHHHHHHH-hhCCeEEEEEeCC
Confidence 1 11 379999999999988874 256777776653 789999999 8889999999999
Q ss_pred CCcccccCHHHHHHHHHhc------CCEEEEeCCCCCCC---------CCccCCCCeEEEeCCCCcc-ccCccceEEEEE
Q 013079 200 NPTLAVANIPELSRLAHDK------GVTVVVDNTFSPLV---------LSPARLGADVVVHSISKFI-SGGADIIAGAVC 263 (450)
Q Consensus 200 NptG~v~~l~~I~~la~~~------gi~livD~~~~~~~---------~~~~~~g~di~~~S~sK~~-g~~g~~igG~l~ 263 (450)
|+||.++|+++|+++|+++ |+++|+|++|+.+. .+....++|.++.|.||++ ++.| + |+++
T Consensus 197 t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g--~-G~l~ 273 (431)
T TIGR01788 197 TYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG--V-GWVI 273 (431)
T ss_pred CCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCC--c-EEEE
Confidence 9999999999999999999 99999999995311 1222337899999999987 7777 4 7765
Q ss_pred c-CHHHH-HHHHH---Hhhhh---hhccCCCc--hHHHHHHHHcc--CCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCC
Q 013079 264 G-PANLV-NSMMD---LHQGA---LMLLGPTM--NPKVAFELSER--IPHLGLRMKEHCHRALIFARRMKKLGL-KVLYP 330 (450)
Q Consensus 264 ~-~~~~~-~~l~~---~~~~~---~~~~g~~~--~~~~a~~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p 330 (450)
. +++.. +.+.. +..+. ....+... .....|..++. ...+.+..++..++++++.+.|++.+. ++..|
T Consensus 274 ~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~ 353 (431)
T TIGR01788 274 WRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISD 353 (431)
T ss_pred EeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeC
Confidence 4 43322 32211 00000 00111111 12223443332 234666777888999999999998864 65544
Q ss_pred CCCCCchhHHHHHHhccCCCcCcEEEEEeCCH----HHHHHHHHHhhc
Q 013079 331 GLEDHPHHELLKSMANKEYGFGGLLCLDMETE----EKANRLMNYLQN 374 (450)
Q Consensus 331 ~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~----~~~~~~~~~l~~ 374 (450)
. + ..++++|.+++. .....+.+.|..
T Consensus 354 ~-~-----------------~~~iV~Fr~~~~~~~~~~~~~l~~~L~~ 383 (431)
T TIGR01788 354 G-S-----------------GIPLVAFKLKDDADPGYTLYDLSHRLRE 383 (431)
T ss_pred C-C-----------------CceEEEEEeCCCCCCCcCHHHHHHHHHH
Confidence 2 0 234899998741 124456666664
No 205
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.91 E-value=3e-22 Score=202.46 Aligned_cols=330 Identities=18% Similarity=0.192 Sum_probs=203.7
Q ss_pred cccccCccccCCH-HHHHHhhcCCC--CCCCCCccccCCCChhHHH-HHHHHHHHhCCCeE-EEecChHHHHHHHHHHHH
Q 013079 61 SIEASATFTVMEP-ETMRRMFAGEL--GPDRDFFIYSRHFNPTVLN-LSRQMAALEGTEAA-YCTASDKAGMSAISSVLM 135 (450)
Q Consensus 61 pi~~att~~~~~~-~~~~~~~~~~~--~n~~~~~~y~r~~~~~~~~-l~~~iA~l~g~~~~-~~tsg~~~gt~ai~~al~ 135 (450)
.+..+.+++.+.+ +++...+...| |+|++.|..+....+..++ .++.+++++|++.. ++++| |++|+.+++.
T Consensus 23 ~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~s---gt~a~~~~l~ 99 (402)
T cd00378 23 ELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHS---GSQANLAVYF 99 (402)
T ss_pred eeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCC---cHHHHHHHHH
Confidence 4455666666554 55555544444 6666555334333334444 45567889998764 55568 8999999999
Q ss_pred HhccCCCEEEEeCCCchhHHHHHHH-hCCCccCeeEEEeC--CC------CHHHHHHhhhcCCceEEEEecCCCCccccc
Q 013079 136 QLCSSGGHVVAARTLYGGTHALLTH-FFPRACNITTTFVD--IS------DHEMVNSAIVQGRTKVLYFESISNPTLAVA 206 (450)
Q Consensus 136 ~l~~~gd~Vi~~~~~y~~~~~~~~~-~~~~~~g~~v~~v~--~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~ 206 (450)
+++++||+|++++|+|+++...... ... ..|.++..++ .+ |++++++++.++++++|++++++|| ...
T Consensus 100 ~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~ 176 (402)
T cd00378 100 ALLEPGDTIMGLDLSHGGHLTHGSFTKVS-ASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPI 176 (402)
T ss_pred HhcCCCCEEEEecCccCcccccccccccc-ccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCc
Confidence 9999999999999999876543211 112 2465544432 22 8999999884468999999888765 577
Q ss_pred CHHHHHHHHHhcCCEEEEeCCC-CCCC-----CCccCCCCeEEEeCCCCccccCccceEEEEEcCH-HHHHHHHHHhhhh
Q 013079 207 NIPELSRLAHDKGVTVVVDNTF-SPLV-----LSPARLGADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQGA 279 (450)
Q Consensus 207 ~l~~I~~la~~~gi~livD~~~-~~~~-----~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~~~ 279 (450)
|+++|+++|+++|+++|+|++| .++. ..+.. ++|+++.|+||+++ |.+ ||+++.++ ++++.+.......
T Consensus 177 ~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l~--G~~-gg~i~~~~~~~~~~l~~~~~~~ 252 (402)
T cd00378 177 DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTLR--GPR-GGLILTRKGELAKKINSAVFPG 252 (402)
T ss_pred CHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCCC--CCC-ceEEEeccHHHHHHHHHHhCcc
Confidence 9999999999999999999996 3332 12223 67999999999884 344 47777765 8888876544311
Q ss_pred hhccCCC-chHHHH-HHHHc-cCC-cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 280 LMLLGPT-MNPKVA-FELSE-RIP-HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 280 ~~~~g~~-~~~~~a-~~~~~-~~~-~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
..++. .....+ ..++. ... ....+.+++.++++++.+.|+++++.+.... ..++++
T Consensus 253 --~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~------------------~~~~~v 312 (402)
T cd00378 253 --LQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGG------------------TDNHLV 312 (402)
T ss_pred --ccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecC------------------CCCeEE
Confidence 12221 122211 11121 222 4556667788999999999998876543211 135688
Q ss_pred EEEeCC-HHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCC----HHH
Q 013079 356 CLDMET-EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGT----LDQ 430 (450)
Q Consensus 356 ~~~l~~-~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~----~~~ 430 (450)
++.++. ......+.+.|.. .| +.+..+.. |.... + ......+||++. ..+ .++
T Consensus 313 ~v~~~~~~~~~~~~~~~l~~---~g-I~v~~~~~------p~~~~----~-------~~~~~~lRi~~~-~~~~~~~~~~ 370 (402)
T cd00378 313 LVDLRPKGITGKAAEDALEE---AG-ITVNKNTL------PWDPS----S-------PFVPSGIRIGTP-AMTTRGMGEE 370 (402)
T ss_pred EEeCCccCCCHHHHHHHHHH---cC-cEEcCCcC------CCCCC----C-------CCCCCeeEecCH-HHHHhCCCHH
Confidence 898862 1123344454543 22 34332211 11110 0 012467999887 422 355
Q ss_pred HHHHHHHHHHHh
Q 013079 431 RWSQFEKALSRM 442 (450)
Q Consensus 431 ~i~~l~~al~~~ 442 (450)
.++.+.++|.++
T Consensus 371 di~~~~~~l~~~ 382 (402)
T cd00378 371 EMEEIADFIARA 382 (402)
T ss_pred HHHHHHHHHHHH
Confidence 566666666653
No 206
>PRK02769 histidine decarboxylase; Provisional
Probab=99.91 E-value=4.4e-22 Score=197.94 Aligned_cols=245 Identities=15% Similarity=0.103 Sum_probs=179.0
Q ss_pred CCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC--e--EEEecChHHHHHHHHHHHHHh--ccCCCEE
Q 013079 71 MEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE--A--AYCTASDKAGMSAISSVLMQL--CSSGGHV 144 (450)
Q Consensus 71 ~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~--~--~~~tsg~~~gt~ai~~al~~l--~~~gd~V 144 (450)
..++++.......+|||++.+.|++......+++++.+|+++|++ . .+||+| ||||+..++... ..++++|
T Consensus 37 ~~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsG---gTean~~a~~~ar~~~~~~~i 113 (380)
T PRK02769 37 SALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNG---GTEGNLYGCYLARELFPDGTL 113 (380)
T ss_pred HHHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecC---hHHHHHHHHHHHHHhCCCcEE
Confidence 446777777777899999999999988888889999999999974 3 389999 999998887654 2467899
Q ss_pred EEeCCCchhHHHHHHHhCCCccCeeEEEeCC-----CCHHHHHHhhhcCC---ceEEEEecCCCCcccccCHHHHHHHHH
Q 013079 145 VAARTLYGGTHALLTHFFPRACNITTTFVDI-----SDHEMVNSAIVQGR---TKVLYFESISNPTLAVANIPELSRLAH 216 (450)
Q Consensus 145 i~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~-----~d~~~l~~ai~~~~---t~lv~i~~~~NptG~v~~l~~I~~la~ 216 (450)
+++..+|+++...+.. .|++...++. .|+++|++++ +++ |.+|+++.++|++|.+.|+++|+++|+
T Consensus 114 i~s~~~H~Sv~ka~~~-----lg~~~~~V~~~~~g~id~~~L~~~i-~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~ 187 (380)
T PRK02769 114 YYSKDTHYSVSKIARL-----LRIKSRVITSLPNGEIDYDDLISKI-KENKNQPPIIFANIGTTMTGAIDNIKEIQEILK 187 (380)
T ss_pred EeCCCceehHHHHHHH-----cCCCCceeccCCCCcCcHHHHHHHH-HhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHH
Confidence 9999999999988752 2333333332 2899999999 554 899999999999999999999999999
Q ss_pred hcC---CEEEEeCCCCCCC---------CCccCCCCeEEEeCCCCccc-cCccceEEEEEcCHHHHHHHHHHhh----hh
Q 013079 217 DKG---VTVVVDNTFSPLV---------LSPARLGADVVVHSISKFIS-GGADIIAGAVCGPANLVNSMMDLHQ----GA 279 (450)
Q Consensus 217 ~~g---i~livD~~~~~~~---------~~~~~~g~di~~~S~sK~~g-~~g~~igG~l~~~~~~~~~l~~~~~----~~ 279 (450)
++| +++|+|++|+... ++... ++|.++.|.||+++ |.| + |+++.+++....+..... ..
T Consensus 188 ~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g--~-G~l~~r~~~~~~~~~~~~yl~~~d 263 (380)
T PRK02769 188 KIGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMP--C-GIVLAKKKYVERISVDVDYIGSRD 263 (380)
T ss_pred HhCCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCC--c-EEEEEehhhhhhcccCccccCCCC
Confidence 998 6999999994322 22223 89999999999998 555 4 777666665554421101 00
Q ss_pred hhccCCC--chHHHHHHHHcc--CCcHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 013079 280 LMLLGPT--MNPKVAFELSER--IPHLGLRMKEHCHRALIFARRMKKLGLKVL 328 (450)
Q Consensus 280 ~~~~g~~--~~~~~a~~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~ 328 (450)
....|+. ......+.+++. ...+.+..++..++++++.+.|++.+.++.
T Consensus 264 ~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~ 316 (380)
T PRK02769 264 QTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAW 316 (380)
T ss_pred CCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 0112222 223344444433 234566777788999999999988777543
No 207
>PLN02397 aspartate transaminase
Probab=99.90 E-value=1.5e-21 Score=198.08 Aligned_cols=224 Identities=12% Similarity=0.098 Sum_probs=146.9
Q ss_pred ccccCCCChhHHHHHHHHHHHhCC--------CeE--EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHH
Q 013079 91 FIYSRHFNPTVLNLSRQMAALEGT--------EAA--YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTH 160 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~g~--------~~~--~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~ 160 (450)
+.|+. .....+||+.+++++.. +.+ ..+.+ ++|..++..++..++.+||+|++++|.|+.+...+.
T Consensus 85 ~~Y~~--~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~-g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~- 160 (423)
T PLN02397 85 KEYLP--IEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLS-GTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFR- 160 (423)
T ss_pred CCCCC--cCCCHHHHHHHHHHHcCCCCchhhcCeeEeeeccc-chHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH-
Confidence 34553 33456788888886531 122 11333 002333445555556799999999999999988875
Q ss_pred hCCCccCeeEEEeCC-------CCHHHHHHhhh--cCCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCC
Q 013079 161 FFPRACNITTTFVDI-------SDHEMVNSAIV--QGRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 161 ~~~~~~g~~v~~v~~-------~d~~~l~~ai~--~~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~ 228 (450)
..|.++..++. .|++.+++.+. +++++++++++||||||.+.+ +++|+++|+++|+++|+|++|
T Consensus 161 ----~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y 236 (423)
T PLN02397 161 ----DAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAY 236 (423)
T ss_pred ----HcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc
Confidence 35777766643 27888877773 256889999999999999975 667888999999999999999
Q ss_pred CCCCCCc-----c---CC----CCeEEEeCCCCccccCccceEEEEE---cCHHHHHHHH----HHhhhhhhccCCCchH
Q 013079 229 SPLVLSP-----A---RL----GADVVVHSISKFISGGADIIAGAVC---GPANLVNSMM----DLHQGALMLLGPTMNP 289 (450)
Q Consensus 229 ~~~~~~~-----~---~~----g~di~~~S~sK~~g~~g~~igG~l~---~~~~~~~~l~----~~~~~~~~~~g~~~~~ 289 (450)
..+.++. . .+ ...++++|+||.++++|+|+ ||++ .++++++.+. ...... ....+.+.+
T Consensus 237 ~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~Rv-G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q 314 (423)
T PLN02397 237 QGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERV-GALSVVCKSADVAVRVKSQLKLIARPM-YSNPPIHGA 314 (423)
T ss_pred CCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccc-eEEEEEeCCHHHHHHHHHHHHHHHhcc-cCCCcHHHH
Confidence 7665421 0 11 24688999999999999999 9974 3566554433 222211 011222334
Q ss_pred HHHHHHHccCC-------cHHHHHHHHHHHHHHHHHHHHhCC
Q 013079 290 KVAFELSERIP-------HLGLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 290 ~~a~~~~~~~~-------~l~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
.++..++.... ++....+++.++++.+.+.|++++
T Consensus 315 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~ 356 (423)
T PLN02397 315 SIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARG 356 (423)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33333333211 133445567899999999999875
No 208
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.90 E-value=2.2e-21 Score=191.30 Aligned_cols=206 Identities=17% Similarity=0.134 Sum_probs=147.0
Q ss_pred ChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhccCCCEEEEe---CCCchhHHHHHHHhCCCccCeeEEE
Q 013079 98 NPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAA---RTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~---~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
.+..+++++.+|+++|. +++++|+| |++||..++.+++++||+|+++ .|.|..+...+. ..|.++.
T Consensus 53 ~~~~~~Le~~lA~~~g~~~e~ilv~~g---g~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~-----l~ga~~~- 123 (346)
T TIGR03576 53 AIFEEKVQELGREHLGGPEEKILVFNR---TSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCK-----LAGAEYF- 123 (346)
T ss_pred HHHHHHHHHHHHHHcCCCcceEEEECC---HHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHH-----HcCCEEe-
Confidence 47789999999999998 88999999 9999999999999999999975 467777766654 3566543
Q ss_pred eCCCCHHHHHHhhhcCCceEEEEecCCCCcccc---cCHHHHHHHHHhcCCEEEEeCCCCCCC---CC---ccCCCCeEE
Q 013079 173 VDISDHEMVNSAIVQGRTKVLYFESISNPTLAV---ANIPELSRLAHDKGVTVVVDNTFSPLV---LS---PARLGADVV 243 (450)
Q Consensus 173 v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v---~~l~~I~~la~~~gi~livD~~~~~~~---~~---~~~~g~di~ 243 (450)
...++++++. .+++++|+++ .+|++|.+ .++++|+++|+++|+++++||+|+... .. ....+.|++
T Consensus 124 -~~~~l~~l~~---~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~div 198 (346)
T TIGR03576 124 -ESDELSELKK---IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLV 198 (346)
T ss_pred -ccCCHHHHhh---CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEE
Confidence 3346666532 3468888885 46899998 689999999999999999999994321 11 123467999
Q ss_pred EeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013079 244 VHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 244 ~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
+.|+||. ++|+|+ ||+++++++++.+........ .+.+.+.+.++..++.... ...+.+.+.++++.+.+.+++
T Consensus 199 v~s~SKa--laG~r~-G~v~~~~~li~~l~~~~~~~~-~s~~~~~~~aa~~aL~~~~-~~~~~~~l~~r~~~~~~~l~~ 272 (346)
T TIGR03576 199 VTSTDKL--MDGPRG-GLLAGRKELVDKIKSVGEQFG-LEAQAPLLAAVVRALEEFE-LSRIRDAFKRKEEVYLRLFDK 272 (346)
T ss_pred Eeccchh--ccccce-EEEEeCHHHHHHHHHhhcCcc-cCccHHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHh
Confidence 9999994 456775 999999999999887765321 1223333333333333322 233344556666666666664
No 209
>PRK10534 L-threonine aldolase; Provisional
Probab=99.90 E-value=1.8e-21 Score=191.86 Aligned_cols=242 Identities=19% Similarity=0.202 Sum_probs=163.5
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
.++...+|++.||+++|.+.+++++| |++++.+++..++.+||+|+++.|.|........ . ....+.++..++.+
T Consensus 32 ~~~~~~~L~~~la~~~g~~~~~v~~~---g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 106 (333)
T PRK10534 32 DDPTVNALQDYAAELSGKEAALFLPT---GTQANLVALLSHCERGEEYIVGQAAHNYLYEAGG-A-AVLGSIQPQPIDAA 106 (333)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEeCc---hHHHHHHHHHHhcCCCCeeEEechhhhhHhcCCc-h-HHhcCceEEeecCC
Confidence 68899999999999999999999999 9999999998889999999998887753322110 0 01112455555432
Q ss_pred -----CHHHHHHhhhcC------CceEEEEecCCCCcccccCHH---HHHHHHHhcCCEEEEeCCCC--CC---CCCccC
Q 013079 177 -----DHEMVNSAIVQG------RTKVLYFESISNPTLAVANIP---ELSRLAHDKGVTVVVDNTFS--PL---VLSPAR 237 (450)
Q Consensus 177 -----d~~~l~~ai~~~------~t~lv~i~~~~NptG~v~~l~---~I~~la~~~gi~livD~~~~--~~---~~~~~~ 237 (450)
|+++|++++ ++ ++++|++++|+ +|.+.+.+ +|+++|+++++++++||+|. .. ......
T Consensus 107 ~~~~~d~~~l~~~i-~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~ 183 (333)
T PRK10534 107 ADGTLPLDKVAAKI-KPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKE 183 (333)
T ss_pred CCCCCCHHHHHHhh-cccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHH
Confidence 799999988 55 68999999765 59998765 55678899999999999862 11 111111
Q ss_pred --CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCch--HHHHHHHHccCCcHHHHHHHHHHHH
Q 013079 238 --LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN--PKVAFELSERIPHLGLRMKEHCHRA 313 (450)
Q Consensus 238 --~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~--~~~a~~~~~~~~~l~~~~~~~~~~~ 313 (450)
...|.++.|+||.++++ +|||+++++++++.+...+. ..+.... ...+..+...++...+++++..+++
T Consensus 184 ~~~~~~~~~~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r 256 (333)
T PRK10534 184 ITQYCDSFTICLSKGLGTP---VGSLLVGNRDYIKRARRWRK----MTGGGMRQAGILAAAGLYALKHNVARLQEDHDNA 256 (333)
T ss_pred HHhcCCEEEEEeEcCCCCc---ccceEEcCHHHHHHHHHHHH----HhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 12466667899999865 54578899999998887665 2222211 1212222222333334555556678
Q ss_pred HHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 314 LIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 314 ~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
+++.+.|+++++++..| .++++++.+++. ....+.+.|..
T Consensus 257 ~~l~~~L~~~g~~~~~~--------------------~~nfv~~~~~~~-~~~~~~~~l~~ 296 (333)
T PRK10534 257 AWLAEQLREAGADVMRQ--------------------DTNMLFVRVGEE-QAAALGEYMRE 296 (333)
T ss_pred HHHHHHHHhCCCccCCC--------------------CceEEEEECCch-hHHHHHHHHHH
Confidence 89999999887654322 255888888742 24566666664
No 210
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.90 E-value=3.1e-21 Score=195.06 Aligned_cols=287 Identities=17% Similarity=0.225 Sum_probs=194.5
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc---------CC-CEEEEeCCCchhHHHHHHHh-----
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS---------SG-GHVVAARTLYGGTHALLTHF----- 161 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~---------~g-d~Vi~~~~~y~~~~~~~~~~----- 161 (450)
..+...+++++|+++.+.+.+++++| |++|+..+++.+.. +| ++|++....|++....+...
T Consensus 81 ~~~~~~~l~~~l~~~~~~~~~~~~~S---Gs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~ 157 (401)
T PRK00854 81 RNDQLAPLYEELAALTGSHKVLPMNS---GAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPD 157 (401)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCC---cHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcc
Confidence 35788999999999999889999999 99999999987742 23 67888888888754332211
Q ss_pred ----CCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC
Q 013079 162 ----FPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL 233 (450)
Q Consensus 162 ----~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~ 233 (450)
+.. ....+..++..|++++++++ .+++++|++++|+||+|.+.| +++|.++|++||+++|+||+|+++..
T Consensus 158 ~~~~~~~-~~~~~~~~~~~d~~~le~~i-~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~ 235 (401)
T PRK00854 158 ARGGFGP-FTPGFRVVPFGDAEALEAAI-TPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGR 235 (401)
T ss_pred ccccCCC-CCCCeEEeCCCCHHHHHHHh-CCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence 111 12345667777999999999 789999999999999999986 99999999999999999999965644
Q ss_pred Cc-------cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHH
Q 013079 234 SP-------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRM 306 (450)
Q Consensus 234 ~~-------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~ 306 (450)
.. .....|+++. +|++++..+++ |++++++++++.+..... .....++.+.+.++...+..++. ....
T Consensus 236 ~g~~~~~~~~g~~~D~~~~--~K~l~gg~~~i-g~v~~~~~~~~~l~~~~~-~~t~~~~~~~~aa~~a~L~~l~~-~~~~ 310 (401)
T PRK00854 236 TGKLLAEEHEGIEADVTLI--GKALSGGFYPV-SAVLSNSEVLGVLKPGQH-GSTFGGNPLACAVARAALKVLTE-EGMI 310 (401)
T ss_pred CchHhHHhhcCCCCCEEEe--cccccCCccCe-EEEEEcHHHHhcccCCCC-CCCCCcCHHHHHHHHHHHHHHHH-cCHH
Confidence 32 1234688874 69998655787 899999888877643222 11122222332233223222211 1144
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC-CHHHHHHHHHHhhcccccccccccc
Q 013079 307 KEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME-TEEKANRLMNYLQNYAQFGFMAVSL 385 (450)
Q Consensus 307 ~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~ 385 (450)
++.+++.+++.+.|++++.... . ...+.|.++.+.+. .......|.+.|... | +.++.
T Consensus 311 ~~~~~~~~~l~~~L~~~~~~~~--~---------------~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~---G-V~v~~ 369 (401)
T PRK00854 311 ENAAEMGAYFLEGLRSIRSNIV--R---------------EVRGRGLMLAVELEPEAGGARQYCEALKER---G-LLAKD 369 (401)
T ss_pred HHHHHHHHHHHHHHHhhccCce--E---------------EEeccceEEEEEEecCchhHHHHHHHHHHC---C-eEEec
Confidence 5667788888888887643211 0 11156778888774 323456777777642 3 22210
Q ss_pred ccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 386 GYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 386 G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
...+.|||++. ...+++.++.+.++|+++
T Consensus 370 ---------------------------~~~~~lR~~p~-~~~t~e~i~~~i~~l~~~ 398 (401)
T PRK00854 370 ---------------------------THDHTIRLAPP-LVITREQVDWALEQIAKV 398 (401)
T ss_pred ---------------------------CCCCEEEEeCC-cccCHHHHHHHHHHHHHH
Confidence 01368999988 766676677666666554
No 211
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.90 E-value=2.6e-21 Score=196.53 Aligned_cols=283 Identities=18% Similarity=0.200 Sum_probs=177.7
Q ss_pred cccCccccCCH-HHHHHhhcCCC--CCCCCCccccCCCChhHHH-HHHHHHHHhCCCeE-EEecChHHHHHHHHHHHHHh
Q 013079 63 EASATFTVMEP-ETMRRMFAGEL--GPDRDFFIYSRHFNPTVLN-LSRQMAALEGTEAA-YCTASDKAGMSAISSVLMQL 137 (450)
Q Consensus 63 ~~att~~~~~~-~~~~~~~~~~~--~n~~~~~~y~r~~~~~~~~-l~~~iA~l~g~~~~-~~tsg~~~gt~ai~~al~~l 137 (450)
..+.+++.+++ +++...+...+ +++.+.|..+......+++ +++.+++++|.+.. ++++| |++|+..++.++
T Consensus 31 ~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~s---gt~al~~~l~~l 107 (416)
T PRK00011 31 IASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHS---GSQANAAVYFAL 107 (416)
T ss_pred ecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCC---chHHHHHHHHHh
Confidence 34444444443 55555443333 4444444333222223333 45589999998765 55567 899999999999
Q ss_pred ccCCCEEEEeCCCchhHHHHHHH-hCCCccCeeEEEeCCC------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHH
Q 013079 138 CSSGGHVVAARTLYGGTHALLTH-FFPRACNITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPE 210 (450)
Q Consensus 138 ~~~gd~Vi~~~~~y~~~~~~~~~-~~~~~~g~~v~~v~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~ 210 (450)
+++||+|+++.++|.++...... .... .|.++.+++.+ |++++++++...++++|++..++ +|...|+++
T Consensus 108 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~--~~~~~~~~~ 184 (416)
T PRK00011 108 LKPGDTILGMDLAHGGHLTHGSPVNFSG-KLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASA--YSRPIDFKR 184 (416)
T ss_pred cCCCCEEEEeccccCCcccccccccccc-ceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCc--CCCccCHHH
Confidence 99999999999999865432211 1111 35666666542 79999999833479999886544 456789999
Q ss_pred HHHHHHhcCCEEEEeCCC-CCCC-----CCccCCCCeEEEeCCCCccccCccceEEEEEcC-HHHHHHHHHHhhhhhhcc
Q 013079 211 LSRLAHDKGVTVVVDNTF-SPLV-----LSPARLGADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLHQGALMLL 283 (450)
Q Consensus 211 I~~la~~~gi~livD~~~-~~~~-----~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~~~~~~~~ 283 (450)
|.++|+++|+++|+|++| .+.. ..+.. ++|+++.|+||++++ .+ ||+++.+ +++.+.+........ ..
T Consensus 185 I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l~g--~~-gg~i~~~~~~~~~~l~~~~~~~~-~~ 259 (416)
T PRK00011 185 FREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTLRG--PR-GGLILTNDEELAKKINSAVFPGI-QG 259 (416)
T ss_pred HHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCCCC--CC-ceEEEeCCHHHHHHHHHHhCccc-cC
Confidence 999999999999999997 3221 12233 689999999998843 33 4888875 688888765543211 11
Q ss_pred CCCchHHHHH-HHH-cc-CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 284 GPTMNPKVAF-ELS-ER-IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 284 g~~~~~~~a~-~~~-~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
.+.....++. .+. .. .+.+..+.+++.++++++.+.|++.++++. +. . ..++++++.++
T Consensus 260 ~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~--~---------------~~~~~~~i~~~ 321 (416)
T PRK00011 260 GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVV-SG--G---------------TDNHLVLVDLR 321 (416)
T ss_pred CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeee-ec--C---------------CCCeEEEEeCc
Confidence 1111122221 111 11 123566778889999999999998876543 21 0 12348888885
Q ss_pred CHH-HHHHHHHHhhc
Q 013079 361 TEE-KANRLMNYLQN 374 (450)
Q Consensus 361 ~~~-~~~~~~~~l~~ 374 (450)
+.. ....+.+.|..
T Consensus 322 ~~~~~~~~~~~~L~~ 336 (416)
T PRK00011 322 SKGLTGKEAEAALEE 336 (416)
T ss_pred ccCCCHHHHHHHHHH
Confidence 221 23456666654
No 212
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.90 E-value=3.2e-21 Score=196.44 Aligned_cols=225 Identities=16% Similarity=0.117 Sum_probs=159.6
Q ss_pred ccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 91 FIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
..|+ ..+...+||+.++++++.+.+++|+| |++|+.+++.+++++|| |++++|.|..+...+. ..|.++
T Consensus 72 ~~Y~--~~~g~~~Lreaia~~~~~~~vv~t~g---gt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~-----~~G~~~ 140 (460)
T PRK13238 72 EAYA--GSRSYYRLEDAVKDIFGYPYTIPTHQ---GRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIE-----LNGATA 140 (460)
T ss_pred cccC--CCCCHHHHHHHHHHHhCCCcEEECCC---HHHHHHHHHHHhCCCCC-EEccCCcccchHHHHH-----HcCCEE
Confidence 3455 35678899999999999999999999 99999999999999999 9999999988877664 356666
Q ss_pred EEeCC---------------CCHHHHHHhhhc----CCceEEEEecCCCCcc-cccC---HHHHHHHHHhcCCEEEEeCC
Q 013079 171 TFVDI---------------SDHEMVNSAIVQ----GRTKVLYFESISNPTL-AVAN---IPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 171 ~~v~~---------------~d~~~l~~ai~~----~~t~lv~i~~~~NptG-~v~~---l~~I~~la~~~gi~livD~~ 227 (450)
++++. .|+++|++++ + ++|++|++++|+||+| .+.+ +++|.++|++||+++|+|++
T Consensus 141 v~v~~~~~~~~~~~~~f~g~id~e~Le~~i-~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa 219 (460)
T PRK13238 141 VDLVIDEALDTGSRHPFKGNFDLEKLEALI-EEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAA 219 (460)
T ss_pred EEEeccccccccccccccCCcCHHHHHHHH-hhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECc
Confidence 66653 3789999998 5 4799999999999998 6654 67999999999999999997
Q ss_pred C-C-CCCC--------CccC---------CCCeEEEeCCCCccccCccceEEEEEcC-HHHHHHHHHHh---hhhhhccC
Q 013079 228 F-S-PLVL--------SPAR---------LGADVVVHSISKFISGGADIIAGAVCGP-ANLVNSMMDLH---QGALMLLG 284 (450)
Q Consensus 228 ~-~-~~~~--------~~~~---------~g~di~~~S~sK~~g~~g~~igG~l~~~-~~~~~~l~~~~---~~~~~~~g 284 (450)
+ . ...+ .... -..|+++.|.+|.+.++ +||+++.+ +++++.++... .+.....|
T Consensus 220 ~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g 296 (460)
T PRK13238 220 RFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGG 296 (460)
T ss_pred chhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccC
Confidence 6 2 1111 1111 13789999999976654 36888877 57888776553 11212223
Q ss_pred CCchHHHHHH-HHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013079 285 PTMNPKVAFE-LSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPG 331 (450)
Q Consensus 285 ~~~~~~~a~~-~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 331 (450)
.....+.|.+ .+.... -....+...+++++|.+.|++.|+.+..|.
T Consensus 297 ~~~~~~~Ala~~l~e~~-~~~~~~~~~~~~~~l~~~L~~~G~~~~~p~ 343 (460)
T PRK13238 297 LAGRDMEALAVGLYEGM-DEDYLAYRIGQVEYLGEGLEEAGVPIQTPA 343 (460)
T ss_pred cHHHHHHHHHhhHHHhh-ChHHHHHHHHHHHHHHHHHHHCCCCeEccC
Confidence 2322122222 222110 112233334467899999999888776664
No 213
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.89 E-value=2.3e-21 Score=195.83 Aligned_cols=288 Identities=16% Similarity=0.178 Sum_probs=190.5
Q ss_pred CCCChhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhccCC-CEEEEeCCCchhHHHHHHHhCC------C
Q 013079 95 RHFNPTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFP------R 164 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~------~ 164 (450)
++.++...++.+.++++++. +.++||+| |++|+..+++.+..+| ++|+..++.|++.......... .
T Consensus 81 ~~~~~~~~~la~~l~~~~~~~~~~~v~~~~s---gsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 157 (398)
T PRK03244 81 LFATEPQIALAERLVELLGAPEGGRVFFCNS---GAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAP 157 (398)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEEeCc---hHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccC
Confidence 44566778999999999874 47899999 9999999998766565 4778888899877433221100 0
Q ss_pred --ccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC-----
Q 013079 165 --ACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL----- 233 (450)
Q Consensus 165 --~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~----- 233 (450)
..+..+..++..|++++++++ .+++++|++++++||+|.+.| +++|.++|+++|+++|+||+|+++..
T Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~~-~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~ 236 (398)
T PRK03244 158 FEPLPGGVEHVPYGDVDALAAAV-DDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF 236 (398)
T ss_pred CCCCCCCceEeCCCCHHHHHHhh-cCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH
Confidence 012345666667999999988 778999999999999999987 88999999999999999999955431
Q ss_pred --CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHH
Q 013079 234 --SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCH 311 (450)
Q Consensus 234 --~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~ 311 (450)
.......|++ +++|.++ +|.|+ |+++.++++++.+..... ..+..++.+.+.++...+..+.. ....++..+
T Consensus 237 ~~~~~~~~pDi~--t~sK~l~-~G~~i-g~~~~~~~~~~~~~~~~~-~~t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~ 310 (398)
T PRK03244 237 AHQHDGVTPDVV--TLAKGLG-GGLPI-GACLAFGPAADLLTPGLH-GSTFGGNPVACAAALAVLDTIAS-EGLLENAER 310 (398)
T ss_pred hhhhhCCCCCEE--EEchhhh-CCccc-EEEEEcHHHHhhccCCCC-cCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 1122346766 5789999 68998 888888888776643221 11233334444444333332221 123455566
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccccc
Q 013079 312 RALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETL 391 (450)
Q Consensus 312 ~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~ 391 (450)
+.+++.+.|++++..+. . ...|.|.+++++++.. .+..+.+.+.. .| +.++..
T Consensus 311 ~~~~l~~~L~~~~~~~~--~---------------~v~g~g~~~~i~~~~~-~~~~~~~~l~~---~G-v~~~~~----- 363 (398)
T PRK03244 311 LGEQLRAGIEALGHPLV--D---------------HVRGRGLLLGIVLTAP-VAKAVEAAARE---AG-FLVNAV----- 363 (398)
T ss_pred HHHHHHHHHHhcCCCce--e---------------eEeeccEEEEEEEecc-HHHHHHHHHHH---CC-eEEeec-----
Confidence 77888888887532110 0 1125688999999643 35667777664 23 222110
Q ss_pred ccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 392 MSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
..+.||||+. ...++++++.+.++|+++
T Consensus 364 ----------------------~~~~iR~~p~-~~~t~~~i~~~~~~l~~~ 391 (398)
T PRK03244 364 ----------------------APDVIRLAPP-LIITDAQVDAFVAALPAI 391 (398)
T ss_pred ----------------------CCCEEEEECC-CcCCHHHHHHHHHHHHHH
Confidence 1367999988 644455555555555544
No 214
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=1.7e-20 Score=187.81 Aligned_cols=306 Identities=17% Similarity=0.198 Sum_probs=202.6
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
.|.+.+|++++|+++|.+.+++|+| ||+|+.+++.++ +++||+|++++++|.++...+. ..|.++++++.+
T Consensus 32 g~~~~~le~~la~~~g~~~~v~~~s---gt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~-----~~G~~~v~vd~~ 103 (379)
T PRK11658 32 GPKNQALEQAFCQLTGNQHAIAVSS---ATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIV-----LLGATPVMVDVD 103 (379)
T ss_pred CHhHHHHHHHHHHHhCCCeEEEECC---HHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHH-----HcCCEEEEEecC
Confidence 5789999999999999999999999 999999999998 7899999999999999877664 368889888763
Q ss_pred ------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCC---ccCCCCeEEEeC
Q 013079 177 ------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLS---PARLGADVVVHS 246 (450)
Q Consensus 177 ------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~---~~~~g~di~~~S 246 (450)
|++++++++ +++|++|+ |+|++|...|+++|.++|+++|+++|+|++|. +..+. ....|.++++++
T Consensus 104 ~~~~~~d~~~l~~~i-~~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~ 179 (379)
T PRK11658 104 RDTLMVTPEAIEAAI-TPRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFH 179 (379)
T ss_pred CCcCCcCHHHHHHhc-ccCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCC
Confidence 789999999 78899987 56789999999999999999999999999983 33222 234466777777
Q ss_pred CCCccccCccceEEEEEc-CHHHHHHHHHHhhhhhh------------------ccC--CCchHHHHHHHHccCCcHHHH
Q 013079 247 ISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALM------------------LLG--PTMNPKVAFELSERIPHLGLR 305 (450)
Q Consensus 247 ~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~------------------~~g--~~~~~~~a~~~~~~~~~l~~~ 305 (450)
.+|.+.+ | . ||+++. ++++.++++..+.+... ..| ..+....|++.+..++.+++.
T Consensus 180 ~~K~l~~-g-~-GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~ 256 (379)
T PRK11658 180 AIKNITC-A-E-GGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEAL 256 (379)
T ss_pred CCCcCcc-c-C-ceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHH
Confidence 7787754 2 2 688775 47788777654421100 011 123444555555556667777
Q ss_pred HHHHHHHHHHHHHHHHhCCCe-eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC---HHHHHHHHHHhhcccccccc
Q 013079 306 MKEHCHRALIFARRMKKLGLK-VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET---EEKANRLMNYLQNYAQFGFM 381 (450)
Q Consensus 306 ~~~~~~~~~~l~~~L~~~~~~-v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~---~~~~~~~~~~l~~~~~~g~i 381 (450)
.++.+++++++.+.|++.+.. +..|.... . ..-.++.|.++. ......+++.|... | |
T Consensus 257 ~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~--~------------~~~~~~~~~~~~~~~~~~r~~~~~~L~~~---g-I 318 (379)
T PRK11658 257 NARRREIAARYLQALADLPFQPLSLPAWPH--Q------------HAWHLFIIRVDEERCGISRDALMEALKER---G-I 318 (379)
T ss_pred HHHHHHHHHHHHHHhcCCCCccCcCCCCCC--c------------eeEEEEEEEECCccccCCHHHHHHHHHHC---C-C
Confidence 777788888888888876542 22222110 0 011245555542 11356777777752 2 3
Q ss_pred ccccccccccccccccc---cCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 382 AVSLGYYETLMSCSGSS---TSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 382 ~vs~G~~~s~~~~~~~~---~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.+..... .+-..|... ....++..+.. ....|-+-+. ..-+++.++.+.+++.++
T Consensus 319 ~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~----~~~~l~lP~~-~~l~~~~~~~i~~~i~~~ 376 (379)
T PRK11658 319 GTGLHFR-AAHTQKYYRERFPTLSLPNTEWN----SERICSLPLF-PDMTDADVDRVITALQQI 376 (379)
T ss_pred CCcccCc-CcccChhhhccCCCCCChHHHHH----HhCeEEccCC-CCCCHHHHHHHHHHHHHH
Confidence 3222110 011111100 01122332222 2466777777 666677777777777764
No 215
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.89 E-value=7.8e-22 Score=195.29 Aligned_cols=281 Identities=14% Similarity=0.089 Sum_probs=189.8
Q ss_pred hcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCC----eEEEecChHHHHHHHHHHHHHhcc------------CC--
Q 013079 80 FAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTE----AAYCTASDKAGMSAISSVLMQLCS------------SG-- 141 (450)
Q Consensus 80 ~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~----~~~~tsg~~~gt~ai~~al~~l~~------------~g-- 141 (450)
+...+.++...|..+.......+++++.+++++|.+ .++||+| ||+|+.+++.++.. ++
T Consensus 19 ~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~g---gt~a~~~al~~~~~~~~~~~~~~~~~~~~~ 95 (345)
T cd06450 19 LTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSG---GSESNLLALLAARDRARKRLKAGGGRGIDK 95 (345)
T ss_pred HHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCC---hhHHHHHHHHHHHHHhhhhhhcccccccCC
Confidence 333344444444444444455666777788888874 5899999 99999999987642 23
Q ss_pred CEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcC------CceEEEEecCCCCcccccCHHH
Q 013079 142 GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQG------RTKVLYFESISNPTLAVANIPE 210 (450)
Q Consensus 142 d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~------~t~lv~i~~~~NptG~v~~l~~ 210 (450)
+.|+++.++|.++...+. ..|.++..++.+ |+++|++++ ++ ++++|++++++||||.+.|+++
T Consensus 96 ~~v~~~~~~h~~~~~~~~-----~~g~~~~~v~~~~~~~~d~~~l~~~i-~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~ 169 (345)
T cd06450 96 LVIVCSDQAHVSVEKAAA-----YLDVKVRLVPVDEDGRMDPEALEAAI-DEDKAEGLNPIMVVATAGTTDTGAIDPLEE 169 (345)
T ss_pred eEEEEcCcchhHHHHHHH-----HHhcCeEEeeeCCCCCcCHHHHHHHH-HHHHHCCCCcEEEEEecccCCCCCCCCHHH
Confidence 378888999998877664 246677776643 899999998 55 7889999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCCCCCC--CCcc-----C-CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhc
Q 013079 211 LSRLAHDKGVTVVVDNTFSPLV--LSPA-----R-LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALML 282 (450)
Q Consensus 211 I~~la~~~gi~livD~~~~~~~--~~~~-----~-~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~ 282 (450)
|+++|+++|+++|+|++|+... .... . .++|+++.|+||+++++. ++ |+++.+
T Consensus 170 i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~-g~-g~~~~~----------------- 230 (345)
T cd06450 170 IADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL-GC-SAVLVR----------------- 230 (345)
T ss_pred HHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCc-ch-HHHHHH-----------------
Confidence 9999999999999999983332 1111 1 268999999999876442 23 665433
Q ss_pred cCCCchHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013079 283 LGPTMNPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 359 (450)
Q Consensus 283 ~g~~~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 359 (450)
....+.++. ....+.++.++..++++++.+.|++++. .+..+. .++++.|.+
T Consensus 231 ------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-------------------~~~iv~f~~ 285 (345)
T cd06450 231 ------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-------------------NLSLVCFRL 285 (345)
T ss_pred ------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-------------------ceeEEEEEE
Confidence 111111111 2233566777778899999999988753 443221 245888888
Q ss_pred CC----HHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCC-CHHHHHHH
Q 013079 360 ET----EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLG-TLDQRWSQ 434 (450)
Q Consensus 360 ~~----~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~-~~~~~i~~ 434 (450)
+. ......+.+.|... |.+.++ + .. .+ .++.+|+|++ .. ++.++++.
T Consensus 286 ~~~~~~~~~~~~i~~~L~~~---g~~~~~-~----------~~------------~~-~~~~lRis~~-~~~~t~~di~~ 337 (345)
T cd06450 286 KPSVKLDELNYDLSDRLNER---GGWHVP-A----------TT------------LG-GPNVLRFVVT-NPLTTRDDADA 337 (345)
T ss_pred CCcchhhHHHHHHHHHHHhc---CCEEEE-e----------eE------------EC-CeEEEEEEec-CCCCCHHHHHH
Confidence 75 23355677777542 111111 0 00 00 1468999999 65 58888999
Q ss_pred HHHHHHH
Q 013079 435 FEKALSR 441 (450)
Q Consensus 435 l~~al~~ 441 (450)
|.++|.+
T Consensus 338 l~~~l~~ 344 (345)
T cd06450 338 LLEDIER 344 (345)
T ss_pred HHHHHHh
Confidence 9888865
No 216
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.89 E-value=9e-22 Score=198.93 Aligned_cols=245 Identities=21% Similarity=0.234 Sum_probs=181.5
Q ss_pred cCccccCC-HHHHHHhhcCCCCCCCCCccc--cCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCC
Q 013079 65 SATFTVME-PETMRRMFAGELGPDRDFFIY--SRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSG 141 (450)
Q Consensus 65 att~~~~~-~~~~~~~~~~~~~n~~~~~~y--~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~g 141 (450)
+.++..++ .+++.++++. ++|.. |.+ ++ .....+.+++.+|+++|++.++++++ |+.|+++++.. +.+|
T Consensus 89 g~s~l~~~vieAv~~~~~~-y~~l~--~~l~~g~-~g~r~~~le~~lA~l~gae~alvv~s---g~aAi~l~l~~-l~~G 160 (454)
T TIGR00474 89 GRAPLAEEAIEAVTDAARG-YSNLE--YDLETGK-RGSRYSHVEGLLCELTGAEDALVVNN---NAAAVLLALNT-LAKG 160 (454)
T ss_pred CCCCCCHHHHHHHHHHHhc-ccchh--ccccccc-cchHHHHHHHHHHHHhCCCcEEEECC---HHHHHHHHHHH-hCCc
Confidence 33343334 4777776664 34432 223 33 23557899999999999999999999 99999988854 6889
Q ss_pred CEEEEeCCCc---hhHHHHHHHhCCCccCeeEEEeCC---CCHHHHHHhhhcCCceEEEEecCCCCc--c--cccCHHHH
Q 013079 142 GHVVAARTLY---GGTHALLTHFFPRACNITTTFVDI---SDHEMVNSAIVQGRTKVLYFESISNPT--L--AVANIPEL 211 (450)
Q Consensus 142 d~Vi~~~~~y---~~~~~~~~~~~~~~~g~~v~~v~~---~d~~~l~~ai~~~~t~lv~i~~~~Npt--G--~v~~l~~I 211 (450)
|+||+++.+| ++..... ....+ .|+++.+++. .+++++++++ +++|++|++++++|++ | .+.|+++|
T Consensus 161 deVIvs~~e~v~~ggs~~i~-~~~~~-~G~~~~~v~~~~~~~l~dle~aI-~~~T~lv~~~h~sN~~~~G~~~~~dl~~I 237 (454)
T TIGR00474 161 KEVIVSRGELVEIGGSFRIP-DVMEQ-SGAKLVEVGTTNRTHLKDYEDAI-TENTALLLKVHTSNYRIVGFTEEVSIAEL 237 (454)
T ss_pred CEEEECCChhhhhcchhhHH-HHHHH-cCCEEEEeCCCCCCCHHHHHHhc-CcCCEEEEEEccCcccccCCCCCCCHHHH
Confidence 9999998774 3333332 23333 7999999876 4789999999 8899999999999985 5 57899999
Q ss_pred HHHHHhcCCEEEEeCCCCCC-------------CCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHH----
Q 013079 212 SRLAHDKGVTVVVDNTFSPL-------------VLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD---- 274 (450)
Q Consensus 212 ~~la~~~gi~livD~~~~~~-------------~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~---- 274 (450)
+++||++|+++++|++.+-+ ..++.+.|+|++++|++|++++|. +|++++++++++.+..
T Consensus 238 ~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~---~G~i~g~~~~i~~l~~~~l~ 314 (454)
T TIGR00474 238 VALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ---AGIIVGKKELIERLKKNPLT 314 (454)
T ss_pred HHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe---EEEEEECHHHHHhhhhchhH
Confidence 99999999999999874211 234566799999999999998874 6999998887765421
Q ss_pred --Hhh------hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC
Q 013079 275 --LHQ------GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL 323 (450)
Q Consensus 275 --~~~------~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 323 (450)
.+- ......+..+.+..++.....++.+..+++++.++++.++++|++.
T Consensus 315 r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 315 RALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAA 371 (454)
T ss_pred HHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhh
Confidence 110 0111334445556667777778888899999999999999999874
No 217
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=3.3e-20 Score=182.09 Aligned_cols=287 Identities=19% Similarity=0.239 Sum_probs=213.4
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
..+...+||+.||+++|.+.+++++| |-.||..++.++++++|.|+.....|-+....++ +.+.++......
T Consensus 82 ~~~~h~~LE~~lA~f~g~e~al~f~S---Gy~AN~~~i~~l~~~~dli~~D~lnHASiidG~r-----ls~a~~~~f~Hn 153 (388)
T COG0156 82 TSDLHVELEEELADFLGAEAALLFSS---GFVANLGLLSALLKKGDLIFSDELNHASIIDGIR-----LSRAEVRRFKHN 153 (388)
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEEcc---cchhHHHHHHHhcCCCcEEEEechhhhhHHHHHH-----hCCCcEEEecCC
Confidence 46788999999999999999999999 9999999999999999999988888888877775 356677777888
Q ss_pred CHHHHHHhhhcC-----CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCC-C---------ccCCCC
Q 013079 177 DHEMVNSAIVQG-----RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVL-S---------PARLGA 240 (450)
Q Consensus 177 d~~~l~~ai~~~-----~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~-~---------~~~~g~ 240 (450)
|+++|++.+++. +.++|+++.+.+..|.+.|+++|++++++|+++++|||++ .++.- . ...-.+
T Consensus 154 D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~v 233 (388)
T COG0156 154 DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEV 233 (388)
T ss_pred CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccc
Confidence 999999998431 2588999999999999999999999999999999999998 22221 1 111235
Q ss_pred eEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHH---HHHccCCcHHHHHHHHHHHHHHHH
Q 013079 241 DVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAF---ELSERIPHLGLRMKEHCHRALIFA 317 (450)
Q Consensus 241 di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~---~~~~~~~~l~~~~~~~~~~~~~l~ 317 (450)
|++++|++|.+|.- ||++.++..+++.+.....+. .....+++..+. .+++.++....+.+++.++..++.
T Consensus 234 di~~gTlsKAlGs~----Gg~v~g~~~~~d~L~~~ar~~--ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~ 307 (388)
T COG0156 234 DIIVGTLGKALGSS----GGYIAGSAALIDYLRNRARPF--IFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFR 307 (388)
T ss_pred eEEEEEchhhhccc----CceeeCcHHHHHHHHHhCCce--eccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 89999999999954 599999999999887764433 233333343332 233344445566777777777777
Q ss_pred HHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccccccccccc
Q 013079 318 RRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGS 397 (450)
Q Consensus 318 ~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~ 397 (450)
..++..++.+. +. ..+++.+.+.+...+..+-+.|... | +.++ .+.+|..
T Consensus 308 ~~~~~~~~~~~-~s-------------------~s~I~pv~~gd~~~a~~~s~~l~~~---G-i~v~------~i~~PTV 357 (388)
T COG0156 308 SLLKALGLVLL-PS-------------------ESPIIPVILGDEERALEASRALLEE---G-IYVS------AIRPPTV 357 (388)
T ss_pred HHHHhcCCccC-CC-------------------CCCeeeeEeCCHHHHHHHHHHHHHC---C-eeEe------eecCCCC
Confidence 66665554321 11 2448889998777777777777652 2 3322 2333332
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 398 STSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 398 ~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
. .....||+|+. ...+++.|+.+.++|.++
T Consensus 358 p--------------~gtarlRi~lt-a~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 358 P--------------KGTARLRITLT-AAHTEEDIDRLAEALSEV 387 (388)
T ss_pred C--------------CCcceEEEEec-CCCCHHHHHHHHHHHHhh
Confidence 2 11356999999 999999999999998764
No 218
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=4.1e-20 Score=184.38 Aligned_cols=309 Identities=17% Similarity=0.207 Sum_probs=203.1
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
.+.++++++.++++.|.+.+++|+| ||+|+++++.++ +++||+|++++++|.++...+. ..|.++++++.+
T Consensus 30 g~~~~~~e~~la~~~g~~~~v~~~s---gt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~-----~~G~~~v~vd~d 101 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTKKALLTPS---CTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFV-----LRGAKIVFVDIR 101 (376)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEeCC---HHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHH-----HcCCEEEEEecC
Confidence 5779999999999999999999999 999999999887 7899999999999999887764 368888888764
Q ss_pred ------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCC-CCccCCC--CeEEEeCC
Q 013079 177 ------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLV-LSPARLG--ADVVVHSI 247 (450)
Q Consensus 177 ------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~-~~~~~~g--~di~~~S~ 247 (450)
|++++++++ +++|++|+ |+|++|...|+++|.++|+++|+++|+|++|+... ++....| .|+.++|+
T Consensus 102 ~~~~~~d~~~le~~i-~~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf 177 (376)
T TIGR02379 102 PDTMNIDETLIESAI-THRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSF 177 (376)
T ss_pred CCcCCCCHHHHHHhc-CcCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeC
Confidence 788999999 78899986 67889999999999999999999999999984332 3333333 36777776
Q ss_pred C--CccccCccceEEEEE-cCHHHHHHHHHHhhhhhh---------------ccC--CCchHHHHHHHHccCCcHHHHHH
Q 013079 248 S--KFISGGADIIAGAVC-GPANLVNSMMDLHQGALM---------------LLG--PTMNPKVAFELSERIPHLGLRMK 307 (450)
Q Consensus 248 s--K~~g~~g~~igG~l~-~~~~~~~~l~~~~~~~~~---------------~~g--~~~~~~~a~~~~~~~~~l~~~~~ 307 (450)
+ |.+.. |.+ ||+++ .++++.++++..+.+... ..| ..+....|+..+..++.+++..+
T Consensus 178 ~~~K~l~~-g~~-gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~ 255 (376)
T TIGR02379 178 HETKNYTS-GGE-GGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQ 255 (376)
T ss_pred CCCCcCcc-cCC-ceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHH
Confidence 4 55653 334 47765 457888888766542210 012 12334445555556777777777
Q ss_pred HHHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccc
Q 013079 308 EHCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSL 385 (450)
Q Consensus 308 ~~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~ 385 (450)
+.++.++++.+.|..+.. .+..|..+....+ .-.++++.++......++++.|... | |....
T Consensus 256 ~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~------------~~~~~~i~~~~~~~r~~l~~~L~~~---g-I~~~~ 319 (376)
T TIGR02379 256 DRLATWQLYQDALKPLEEKGIIELPSIPNGCQH------------NAHMFYIKLKDEDDRNELIKYLKEQ---E-IMAVF 319 (376)
T ss_pred HHHHHHHHHHHHhccCCcCCeeeCCCCCCCCee------------eeEEEEEEECCcCCHHHHHHHHHHC---C-CCccc
Confidence 777777888888876532 1223332211110 0125566676322356778877753 2 44332
Q ss_pred cccccccccccccc----CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 386 GYYETLMSCSGSST----SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 386 G~~~s~~~~~~~~~----~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
+.. .+-..|.-.. ....+..+. +....|.+=+. ..-+++.++.+.+++.++
T Consensus 320 ~~~-p~~~~~~~~~~~~~~~~~p~~~~----~~~~~l~LP~~-~~l~~~~~~~i~~~i~~~ 374 (376)
T TIGR02379 320 HYV-PLHSSPAGRYFGRFHGEDIYTTK----ESERLVRLPLY-YGLSKEDQARVIQTICDY 374 (376)
T ss_pred cCc-CCCcchhHHhhCCCCCCChHHHH----HHhceEEccCC-CCCCHHHHHHHHHHHHHH
Confidence 211 1111110000 011122222 12466777777 666677777777777653
No 219
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.89 E-value=5.3e-21 Score=192.83 Aligned_cols=286 Identities=13% Similarity=0.171 Sum_probs=190.4
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc---------CC-CEEEEeCCCchhHHHHHHHhCC---
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS---------SG-GHVVAARTLYGGTHALLTHFFP--- 163 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~---------~g-d~Vi~~~~~y~~~~~~~~~~~~--- 163 (450)
.++...+++++|+++.+.+.++|++| |++|+..+++.+.. +| ++||+....|++..........
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~S---GseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~ 156 (396)
T PRK04073 80 HSDQLGPWYEKVAKLTGKDMVLPMNT---GAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEE 156 (396)
T ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCC---hHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcc
Confidence 45677889999999998889999999 99999999986531 34 6789888888875432211100
Q ss_pred --CccC---eeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCC
Q 013079 164 --RACN---ITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLS 234 (450)
Q Consensus 164 --~~~g---~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~ 234 (450)
...+ ..+..++..|++++++++ ++++++|++++++||+|.+.| +++|.++|+++|+++|+||+|.++...
T Consensus 157 ~~~~~~~~~~~~~~~~~~d~~~l~~~i-~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~ 235 (396)
T PRK04073 157 YKRGFGPMLPGIKKIPYGDLEALKAAI-TPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRT 235 (396)
T ss_pred cccCCCCCCCCceEeCCCCHHHHHHhc-ccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcC
Confidence 0000 123456667999999999 788999999999999999976 889999999999999999999655421
Q ss_pred -------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHH
Q 013079 235 -------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMK 307 (450)
Q Consensus 235 -------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~ 307 (450)
......|+++ ++|.+|++|+|+ |++++++++++.+..... ..+..++.+.+.++...+..++. ....+
T Consensus 236 g~~~~~~~~~~~pdi~~--~sK~lg~gg~~i-g~~~~~~~i~~~~~~~~~-~~t~~~~~~~~aaa~aaL~~~~~-~~l~~ 310 (396)
T PRK04073 236 GKLFACDWDNVTPDMYI--LGKALGGGVFPI-SCVAANRDILGVFTPGSH-GSTFGGNPLACAVSIAALEVLEE-EKLPE 310 (396)
T ss_pred cHHHHhhhcCCCCCEEE--ecccccCCCCcc-eEEEEcHHHHhhhcCCCC-CCCCCCCHHHHHHHHHHHHHHHh-cCHHH
Confidence 1222467665 789999988998 999999988887753222 12233444444444333332211 12234
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccc
Q 013079 308 EHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGY 387 (450)
Q Consensus 308 ~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~ 387 (450)
+..++++++.+.|++++. +.+. ...+.|.++.++++. ....+.+.|.. .| +.+.
T Consensus 311 ~~~~~~~~l~~~L~~l~~----~~i~-------------~~~~~g~~~~~~~~~--~~~~~~~~l~~---~G-v~~~--- 364 (396)
T PRK04073 311 RSLELGEYFKEQLKEIDN----PMIK-------------EVRGRGLFIGVELNE--PARPYCEALKE---EG-LLCK--- 364 (396)
T ss_pred HHHHHHHHHHHHHHhhcC----Cccc-------------ceecceEEEEEEecc--hHHHHHHHHHH---CC-eEEe---
Confidence 556677888888887532 1111 111467789998864 24567766654 23 2211
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 388 YETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 388 ~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
+ ..++.|||++. ...+++.++.+.++|+++
T Consensus 365 -------~-----------------~~~~~iRi~p~-l~~t~e~i~~~~~~l~~~ 394 (396)
T PRK04073 365 -------E-----------------THETVIRFAPP-LVITKEELDWAFEKIKAV 394 (396)
T ss_pred -------c-----------------CCCCEEEEECC-cccCHHHHHHHHHHHHHH
Confidence 0 01368999987 656666677766666543
No 220
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.88 E-value=9.4e-21 Score=190.05 Aligned_cols=286 Identities=15% Similarity=0.186 Sum_probs=189.5
Q ss_pred CCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc---c----CCCEEEEeCCCchhHHHHHHHhCCC----
Q 013079 96 HFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC---S----SGGHVVAARTLYGGTHALLTHFFPR---- 164 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~---~----~gd~Vi~~~~~y~~~~~~~~~~~~~---- 164 (450)
+..+...++++++++++|.+.+++++| |++|+.++++.+. . ++|+|++.++.|+++..........
T Consensus 66 ~~~~~~~~l~~~la~~~g~~~~~~~~s---g~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~ 142 (379)
T TIGR00707 66 YYTEPQEELAEKLVEHSGADRVFFCNS---GAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQ 142 (379)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCC---cHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhh
Confidence 457889999999999999999999999 9999999987542 2 3799999999998765443211110
Q ss_pred ----ccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCccccc----CHHHHHHHHHhcCCEEEEeCCCCCCCCCc-
Q 013079 165 ----ACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA----NIPELSRLAHDKGVTVVVDNTFSPLVLSP- 235 (450)
Q Consensus 165 ----~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~----~l~~I~~la~~~gi~livD~~~~~~~~~~- 235 (450)
....++.+++..|++++++.+ ++++++|++++++|++|... ++++|.++|+++|+++|+||+|.++....
T Consensus 143 ~~~~~~~~~~~~~~~~d~~~l~~~~-~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~ 221 (379)
T TIGR00707 143 KGFEPLVPGFSYAPYNDIESLKKAI-DDETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK 221 (379)
T ss_pred ccCCCCCCCceeeCCCCHHHHHHHh-hhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch
Confidence 011233445555899999998 77899999988888888653 38899999999999999999996553321
Q ss_pred ------cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHH
Q 013079 236 ------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEH 309 (450)
Q Consensus 236 ------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~ 309 (450)
.....|++ ++||.++ +|+|+ ||+++++++++.+..... .....++.+.+.++..++..++. ....+++
T Consensus 222 ~~~~~~~~~~~d~~--t~sK~~~-~G~ri-G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aa~aaL~~~~~-~~~~~~~ 295 (379)
T TIGR00707 222 FFAYEHYGIEPDII--TLAKGLG-GGVPI-GATLAKEEVAEAFTPGDH-GSTFGGNPLACAAALAVLEVIEK-ERLLENV 295 (379)
T ss_pred hhhHHhcCCCCCEE--EEccccc-CCccc-EEEEEcHHHHhhhcCCCC-CCCCCCCHHHHHHHHHHHHHHHh-hhHHHHH
Confidence 11234554 5899999 89998 999999888887764322 11122333444444433332221 2344566
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccc
Q 013079 310 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYE 389 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~ 389 (450)
.++++.+.+.|++.+....... ..+.|.++++.++.. ...+.+.|... | +.+..+
T Consensus 296 ~~~~~~~~~~l~~~~~~~~~~~----------------~~~~g~~~~~~~~~~--~~~~~~~l~~~---G-v~v~~~--- 350 (379)
T TIGR00707 296 KEKGDYFKERLEELGKNYPNKE----------------VRGKGLMLGIELEAP--CKDIVKKALEK---G-LLVNCA--- 350 (379)
T ss_pred HHHHHHHHHHHHHHHhhCCCCc----------------cccCceEEEEEecCc--HHHHHHHHHHC---C-cEEeeC---
Confidence 7777888888876533211110 013466889988643 35677766642 2 332211
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 390 TLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 390 s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
..+.||||+. ...+++.++.+.++|++
T Consensus 351 ------------------------~~~~lRi~~~-~~~t~~~i~~~~~~l~~ 377 (379)
T TIGR00707 351 ------------------------GPKVLRFLPP-LIITKEEIDEAVSALEE 377 (379)
T ss_pred ------------------------CCCEEEEECC-CcCCHHHHHHHHHHHHH
Confidence 1367999988 65556666666666654
No 221
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.88 E-value=5.1e-21 Score=194.17 Aligned_cols=289 Identities=15% Similarity=0.199 Sum_probs=191.3
Q ss_pred CChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCCC--------
Q 013079 97 FNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPR-------- 164 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~-------- 164 (450)
..+...++++.++++++ .+.++|++| |++|+..+++.+. .++++|++.++.|++...........
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~v~~~~s---gsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 153 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLDKVFFVNS---GTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFG 153 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCc---HHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCC
Confidence 46788999999999998 788999999 9999999998763 56899999999999865543221110
Q ss_pred ccCeeEEEeCCC-----------CHHHHHHhhhc--CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCC
Q 013079 165 ACNITTTFVDIS-----------DHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 165 ~~g~~v~~v~~~-----------d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~ 227 (450)
....++..++.+ |+++|++++.. .++++|++++++|++|.+.+ +++|.++|+++|+++|+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev 233 (413)
T cd00610 154 PLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEV 233 (413)
T ss_pred CCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 012245566665 78899998833 36788999988899999887 99999999999999999999
Q ss_pred CCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHH--HHHhhhhhhccCCCchHHHHHHHHcc
Q 013079 228 FSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSM--MDLHQGALMLLGPTMNPKVAFELSER 298 (450)
Q Consensus 228 ~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l--~~~~~~~~~~~g~~~~~~~a~~~~~~ 298 (450)
|+++.. +......|++ |++|.+++ |.++ |++++++++++.+ ..... ..+..++.+.+.++...+..
T Consensus 234 ~~g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-g~~~-g~~~~~~~~~~~~~~~~~~~-~~t~~~~~~~~~a~~a~l~~ 308 (413)
T cd00610 234 QTGFGRTGKMFAFEHFGVEPDIV--TLGKGLGG-GLPL-GAVLGREEIMDAFPAGPGLH-GGTFGGNPLACAAALAVLEV 308 (413)
T ss_pred ccCCCcCcchhhHhhcCCCCCeE--EEcccccC-cccc-EEEEEcHHHHHhhccCCCCC-CCCCCcCHHHHHHHHHHHHH
Confidence 965421 1112234654 67899997 7998 8888888888876 11111 11122333333333333322
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--------HHHHHHHH
Q 013079 299 IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--------EKANRLMN 370 (450)
Q Consensus 299 ~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--------~~~~~~~~ 370 (450)
++. ....++..++.+++.+.|++.......+. ...+.|.++++.++.. .....+..
T Consensus 309 l~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---------------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (413)
T cd00610 309 LEE-EGLLENAAELGEYLRERLRELAEKHPLVG---------------DVRGRGLMIGIELVKDRATKPPDKELAAKIIK 372 (413)
T ss_pred HHh-ccHHHHHHHHHHHHHHHHHHHHhhCCcEE---------------EeecCceEEEEEEecCCCcCCcchHHHHHHHH
Confidence 221 23445567777788888776432100000 0114678999998742 34566777
Q ss_pred HhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 371 YLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 371 ~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
.|... | +.++.++ .+.+|+++. ...+++.++.+.++|.+
T Consensus 373 ~l~~~---g-v~v~~~~---------------------------~~~lR~~~~-~~~t~~~i~~~~~~l~~ 411 (413)
T cd00610 373 AALER---G-LLLRPSG---------------------------GNVIRLLPP-LIITEEEIDEGLDALDE 411 (413)
T ss_pred HHHHC---C-eEEeecC---------------------------CCEEEEECC-CcCCHHHHHHHHHHHHH
Confidence 76542 2 3322220 367999999 77777777777777664
No 222
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=2.8e-20 Score=186.67 Aligned_cols=306 Identities=18% Similarity=0.210 Sum_probs=202.5
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
.+..+++|+.+|+++|.+.+++++| |++|+++++.++ +++||+|+++.++|.++...+. ..|.++++++.+
T Consensus 28 g~~~~~le~~la~~~g~~~~v~~~s---gt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~-----~~G~~~~~~~~~ 99 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKYAVAFNS---ATSALHIACLALGVGPGDRVWTTPITFVATANCAL-----YCGAKVDFVDID 99 (380)
T ss_pred ChhHHHHHHHHHHHHCCCeEEEEcC---HHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHH-----HcCCEEEEEecC
Confidence 4678999999999999998899999 999999999998 7899999999999998877664 368889888763
Q ss_pred ------CHHHHHHhhhc----CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC-CCCCCccCCCC----e
Q 013079 177 ------DHEMVNSAIVQ----GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVLSPARLGA----D 241 (450)
Q Consensus 177 ------d~~~l~~ai~~----~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~~~~~~g~----d 241 (450)
|++++++++ + ++|++|++ +|++|...|+++|.++|+++|+++|+|++|. +..++...+|. |
T Consensus 100 ~~~~~~d~~~l~~~i-~~~~~~~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d 175 (380)
T TIGR03588 100 PDTGNIDEDALEKKL-AAAKGKLPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYAD 175 (380)
T ss_pred CCcCCcCHHHHHHHh-hcccCCCceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccc
Confidence 889999999 6 68998885 4578999999999999999999999999982 22244444455 9
Q ss_pred EEEeCCC--CccccCccceEEEEE-cCHHHHHHHHHHhhhhhh-------------------ccC--CCchHHHHHHHHc
Q 013079 242 VVVHSIS--KFISGGADIIAGAVC-GPANLVNSMMDLHQGALM-------------------LLG--PTMNPKVAFELSE 297 (450)
Q Consensus 242 i~~~S~s--K~~g~~g~~igG~l~-~~~~~~~~l~~~~~~~~~-------------------~~g--~~~~~~~a~~~~~ 297 (450)
+.+.|+| |+++.+. ||+++ .++++.++++..+.+... ..| ..++...+.....
T Consensus 176 ~~~~S~~~~K~~~~~~---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~ 252 (380)
T TIGR03588 176 ATVFSFHPVKIITTAE---GGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLS 252 (380)
T ss_pred eEEEecCCCCcccccC---ceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHH
Confidence 9999987 8887542 57665 457777776654331100 011 1233444444444
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhc
Q 013079 298 RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQN 374 (450)
Q Consensus 298 ~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~~~l~~ 374 (450)
.++.++...++.+++++++.+.|.+.+. .+..+.....+ .-.+..+.+.. ......+.+.|..
T Consensus 253 qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~--------------~~~~~~i~~~~~~~~~r~~l~~~L~~ 318 (380)
T TIGR03588 253 QLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKS--------------AWHLYPILLDQEFGCTRKEVFEALRA 318 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEe--------------EEEEEEEEECCcCCCCHHHHHHHHHH
Confidence 5566677777778888899999987653 21111100000 01133334431 1235667777764
Q ss_pred cccccccccccccccccccccccc---cCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 375 YAQFGFMAVSLGYYETLMSCSGSS---TSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 375 ~~~~g~i~vs~G~~~s~~~~~~~~---~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
. | |.+...... +...|... ....++.... +....|++.++ ..-+++.++.+.+++.++
T Consensus 319 ~---g-I~~~~~~~~-~~~~~~~~~~~~~~~~p~a~~----~~~~~l~lP~~-~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 319 A---G-IGVQVHYIP-VHLQPYYRQGFGDGDLPSAEN----FYLAEISLPLH-PALTLEQQQRVVETLRKV 379 (380)
T ss_pred C---C-CCcccCCcc-cccChhhhccCCcCCCcHHHH----HHhceEEcCCC-CCCCHHHHHHHHHHHHHh
Confidence 2 2 444433211 10111110 0111222222 22578999999 777778888888887754
No 223
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.88 E-value=1.2e-19 Score=181.50 Aligned_cols=309 Identities=14% Similarity=0.145 Sum_probs=202.1
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
.+.++++++.+++++|.+.+++|+| |++|+++++..+ +++||+|+++.++|.++...+. ..|.++++++.+
T Consensus 30 ~~~~~~~e~~la~~~g~~~~v~~~s---gt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~-----~~G~~~v~~d~d 101 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSAKVLLTPS---CTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFV-----LRGAKIVFVDIR 101 (375)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECC---HHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHH-----HcCCEEEEEecC
Confidence 4678999999999999999999999 999999988765 6899999999999999988775 368888888754
Q ss_pred ------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCC-CCccCC--CCeEEEeCC
Q 013079 177 ------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLV-LSPARL--GADVVVHSI 247 (450)
Q Consensus 177 ------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~-~~~~~~--g~di~~~S~ 247 (450)
|++++++++ ++++++|++. |++|...++++|.++|+++|+++|+|++|+... ++.... ..|+.+.|+
T Consensus 102 ~~~~~~d~~~le~~i-~~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf 177 (375)
T PRK11706 102 PDTMNIDETLIEAAI-TPKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSF 177 (375)
T ss_pred CCcCCcCHHHHHHhc-CCCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeC
Confidence 789999999 7889999864 579999999999999999999999999983332 222222 257888887
Q ss_pred C--CccccCccceEEEEEcCHHHHHHHHHHhhhhh---------------hccCC--CchHHHHHHHHccCCcHHHHHHH
Q 013079 248 S--KFISGGADIIAGAVCGPANLVNSMMDLHQGAL---------------MLLGP--TMNPKVAFELSERIPHLGLRMKE 308 (450)
Q Consensus 248 s--K~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~---------------~~~g~--~~~~~~a~~~~~~~~~l~~~~~~ 308 (450)
+ |.++. |.+ |++++.++++.++++..+.+.. ...|. .+....|+.....++.++...++
T Consensus 178 ~~~K~l~~-g~g-G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~ 255 (375)
T PRK11706 178 HETKNYTA-GEG-GALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQR 255 (375)
T ss_pred CCCccccc-cCC-eEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 7 99975 543 3566777888887766553210 01122 13344455555555666666666
Q ss_pred HHHHHHHHHHHHHhCCC--eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccc
Q 013079 309 HCHRALIFARRMKKLGL--KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLG 386 (450)
Q Consensus 309 ~~~~~~~l~~~L~~~~~--~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G 386 (450)
.+++.+++.+.|..++. .+..|..+.. ......++++.++......++++.|...+ |.++..
T Consensus 256 R~~~~~~~~~~L~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~r~~l~~~L~~~g----I~~~~~ 319 (375)
T PRK11706 256 RLALWQRYYDALAPLAEAGRIELPSIPDD------------CKHNAHMFYIKLRDLEDRSALINFLKEAG----IMAVFH 319 (375)
T ss_pred HHHHHHHHHHHhcCCCcCCeeecCCCCCC------------CceeeEEEEEEECCcCCHHHHHHHHHHCC----CCcccc
Confidence 77777788888876541 1222321110 00122366677764334567888877533 444433
Q ss_pred ccccccccccccc----CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 387 YYETLMSCSGSST----SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 387 ~~~s~~~~~~~~~----~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.. .+...+.... ...++..+.. ....|-+-+. ..-+++.++.+.+++.++
T Consensus 320 ~~-p~~~~~~~~~~~~~~~~~p~a~~~----~~~~l~lP~~-~~l~~~~~~~i~~~i~~~ 373 (375)
T PRK11706 320 YI-PLHSSPAGERFGRFHGEDRYTTKE----SERLLRLPLF-YNLTDVEQRTVIDTILEF 373 (375)
T ss_pred CC-ccCcchhhHhcCCCCCCChHHHHH----HhCcEeccCC-CCCCHHHHHHHHHHHHHH
Confidence 21 1111111100 1123333332 2456776666 545566677777776653
No 224
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=4.6e-21 Score=174.60 Aligned_cols=311 Identities=19% Similarity=0.221 Sum_probs=214.2
Q ss_pred ccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc-C
Q 013079 62 IEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS-S 140 (450)
Q Consensus 62 i~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~-~ 140 (450)
-.+|.|++.|+.+....+.+... +...|| .+|+..+|++.+|+++|.|..+|++| ||.+|.++++.-|. +
T Consensus 25 DLRSDTvT~PTdeMr~am~eA~v----gDdVyG--eD~tt~rLE~~vA~l~GKEAgLFv~S---GTmgNllaIm~Hc~~r 95 (384)
T KOG1368|consen 25 DLRSDTVTVPTDEMRRAMAEASV----GDDVYG--EDPTTNRLEQRVAELFGKEAGLFVPS---GTMGNLLAIMVHCHQR 95 (384)
T ss_pred ccccccccCChHHHHHHHhhccc----Cccccc--CCccHHHHHHHHHHHhCccceeeecc---cccccHHHHHHHhcCC
Confidence 35789998887665555555553 446788 46889999999999999999999999 99999999987764 8
Q ss_pred CCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcC-------CceEEEEecCCCCcc-cccC
Q 013079 141 GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQG-------RTKVLYFESISNPTL-AVAN 207 (450)
Q Consensus 141 gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~-------~t~lv~i~~~~NptG-~v~~ 207 (450)
|.+||+-+..|--.++.- . ...+.|+.+..+... |++++++++..+ .|++|++|+-+|.+| .+.|
T Consensus 96 g~eii~gd~~HI~~~E~g-g-~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlP 173 (384)
T KOG1368|consen 96 GSEIIVGDRAHIHRYEQG-G-ISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLP 173 (384)
T ss_pred CceEEeccchheeehhcc-C-hhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEee
Confidence 899999887664333221 0 111245555554332 899999999423 489999999888777 7777
Q ss_pred HH---HHHHHHHhcCCEEEEeCCC---C--CCCCCccCC--CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh
Q 013079 208 IP---ELSRLAHDKGVTVVVDNTF---S--PLVLSPARL--GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ 277 (450)
Q Consensus 208 l~---~I~~la~~~gi~livD~~~---~--~~~~~~~~~--g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~ 277 (450)
++ +|.++|+++|+.+|+|.+. . ....+..++ -.|-+...+||.+|.| +|.+++++++++++.+.+|.
T Consensus 174 le~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RK 250 (384)
T KOG1368|consen 174 LEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRK 250 (384)
T ss_pred HHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEccHHHHHHHHHHHH
Confidence 55 7788999999999999873 1 112222222 3688888999999977 67788999999999888777
Q ss_pred hhhhccCCCchH--HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 278 GALMLLGPTMNP--KVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 278 ~~~~~~g~~~~~--~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
..|+.+-+ ..|++++-.+.+-...++.-.+++..|++.+...+ +++..|..+ .++
T Consensus 251 ----alGGGmRQsGvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~e------------------tNi 308 (384)
T KOG1368|consen 251 ----ALGGGMRQSGVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEIRVEVPAVE------------------TNI 308 (384)
T ss_pred ----HhcCchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccceeeecchhh------------------cce
Confidence 34443332 23333333444433355555677788999998766 477666422 236
Q ss_pred EEEEeC-CHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHH
Q 013079 355 LCLDME-TEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWS 433 (450)
Q Consensus 355 ~~~~l~-~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~ 433 (450)
+.+.+. ..-.++.|.+.++. .|.+. |+-....+||++. +.-+++.++
T Consensus 309 v~~~l~q~~~~~~~l~~~~~k---~gi~l----------------------------m~~~s~r~Rivlh-~Qvt~~~ve 356 (384)
T KOG1368|consen 309 VNMVLCQARLTAEELCKFLEK---NGILL----------------------------MGGASRRIRIVLH-HQVTDEDVE 356 (384)
T ss_pred eeeecccccCCHHHHHHHHHH---CCeEE----------------------------eeccccceEEEEE-EecCHHHHH
Confidence 776665 22236777777765 22111 1111245999999 877777788
Q ss_pred HHHHHHH
Q 013079 434 QFEKALS 440 (450)
Q Consensus 434 ~l~~al~ 440 (450)
.+..++.
T Consensus 357 ~~~~~~~ 363 (384)
T KOG1368|consen 357 YVKSVLS 363 (384)
T ss_pred HHHHHHH
Confidence 8877773
No 225
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.88 E-value=9.6e-20 Score=182.85 Aligned_cols=286 Identities=17% Similarity=0.152 Sum_probs=198.4
Q ss_pred hhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc--------------cCCCEEEEeCCCchhHHHHHHHhCCC
Q 013079 99 PTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC--------------SSGGHVVAARTLYGGTHALLTHFFPR 164 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~--------------~~gd~Vi~~~~~y~~~~~~~~~~~~~ 164 (450)
...++||+.||+++|.+.++++++ |..|+..++.+++ ..++.|+.....|.+....++ +..+
T Consensus 147 ~~h~~LE~~LA~f~g~e~all~sS---Gy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~~ 222 (476)
T PLN02955 147 TYHRLLESSLADLKKKEDCLVCPT---GFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAER 222 (476)
T ss_pred HHHHHHHHHHHHHHCCCcEEEECC---hHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hccc
Confidence 567899999999999999999999 9999999998762 345677777778888877774 2222
Q ss_pred ccCeeEEEeCCCCHHHHHHhhhc--CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc-------
Q 013079 165 ACNITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP------- 235 (450)
Q Consensus 165 ~~g~~v~~v~~~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~------- 235 (450)
..+.++..++.+|+++|++.++. .+.++|+++.+.++.|.+.|+++|.++|++||+.+++||+++...+.+
T Consensus 223 ~~~a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e 302 (476)
T PLN02955 223 QGNVEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAE 302 (476)
T ss_pred cCCceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHH
Confidence 12577777888899999988832 346788899999999999999999999999999999999984322111
Q ss_pred ---cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHH-HHHH-HHccCCcHHHHHHHHH
Q 013079 236 ---ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK-VAFE-LSERIPHLGLRMKEHC 310 (450)
Q Consensus 236 ---~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~-~a~~-~~~~~~~l~~~~~~~~ 310 (450)
..-.+|++++|++|.+|..| |++++++++++.++....... +.++.+.+. ++.. ++........+.+++.
T Consensus 303 ~~g~~~di~ii~~TLsKA~G~~G----Gfi~gs~~~~~~l~~~~~~~i-fStalpp~~aaa~laal~l~~~~~~~r~~L~ 377 (476)
T PLN02955 303 EFNCEADVDLCVGTLSKAAGCHG----GFIACSKKWKQLIQSRGRSFI-FSTAIPVPMAAAAYAAVVVARKEKWRRKAIW 377 (476)
T ss_pred HhCCCCCCcEEEEeCccchhccC----ceeecHHHHHHHHHHhCCCCe-ecccccHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 11257899999999998764 999999988888876544322 222222222 2221 2222222233445556
Q ss_pred HHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccc
Q 013079 311 HRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYET 390 (450)
Q Consensus 311 ~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s 390 (450)
++.+++.+. .++.+ ..+++.+.+.+...+..+.+.|... | +.++
T Consensus 378 ~n~~~fr~~---~G~~~-----------------------~sPI~pI~ig~~~~a~~~~~~L~~~---G-i~v~------ 421 (476)
T PLN02955 378 ERVKEFKAL---SGVDI-----------------------SSPIISLVVGNQEKALKASRYLLKS---G-FHVM------ 421 (476)
T ss_pred HHHHHHHHh---cCCCC-----------------------CCCEEEEEeCCHHHHHHHHHHHHHC---C-CEEE------
Confidence 666655542 23221 1348889998877788888888753 3 3333
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 391 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
.+..|... .....+||++. ...++++++.|.++|.++..
T Consensus 422 ~i~yPtVP--------------~g~~rLRi~ls-A~Ht~edId~lv~~L~~~~~ 460 (476)
T PLN02955 422 AIRPPTVP--------------PNSCRLRVTLS-AAHTTEDVKKLITALSSCLD 460 (476)
T ss_pred EECCCCCC--------------CCCceEEEeeC-CCCCHHHHHHHHHHHHHHHh
Confidence 22334332 11356999999 98888888888888877643
No 226
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=5.6e-20 Score=185.97 Aligned_cols=253 Identities=17% Similarity=0.167 Sum_probs=165.4
Q ss_pred cccccCccccCCH-HHHHHhhcCCCCCCCCCccccCC--CChhHHHHHH----HHHHHhCCCeEE-EecChHHHHHHHHH
Q 013079 61 SIEASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRH--FNPTVLNLSR----QMAALEGTEAAY-CTASDKAGMSAISS 132 (450)
Q Consensus 61 pi~~att~~~~~~-~~~~~~~~~~~~n~~~~~~y~r~--~~~~~~~l~~----~iA~l~g~~~~~-~tsg~~~gt~ai~~ 132 (450)
++..|.+++.|.+ +++...+...|+. ++.++|. +++.++++++ .+|+++|.+.++ +++| |+.|+..
T Consensus 32 ~l~~sen~~~p~v~~a~~~~~~~~~~~---g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~S---G~~A~~~ 105 (416)
T PRK13034 32 ELIASENFTSPAVMEAQGSVLTNKYAE---GYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHS---GSQANGA 105 (416)
T ss_pred eecccccCCCHHHHHHhcchhhcCCCC---CCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCC---cHHHHHH
Confidence 5677888887764 5665555444443 2334443 4789999999 999999999885 5689 9999999
Q ss_pred HHHHhccCCCEEEEeCCCchhHHH-HHHHhCCCccCe--eEEEeCC------CCHHHHHHhhhcCCceEEEEecCCCCcc
Q 013079 133 VLMQLCSSGGHVVAARTLYGGTHA-LLTHFFPRACNI--TTTFVDI------SDHEMVNSAIVQGRTKVLYFESISNPTL 203 (450)
Q Consensus 133 al~~l~~~gd~Vi~~~~~y~~~~~-~~~~~~~~~~g~--~v~~v~~------~d~~~l~~ai~~~~t~lv~i~~~~NptG 203 (450)
++.+++++||+|++.+..|.+... .+. +...+. +..+++. .|++++++.+...++++|+++.+. +|
T Consensus 106 ~l~al~~~GD~Vl~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g 180 (416)
T PRK13034 106 VYLALLKPGDTILGMSLSHGGHLTHGAK---VSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YP 180 (416)
T ss_pred HHHHhcCCCCEEEEcCccceeeeecCCc---ceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cc
Confidence 999999999999999999876321 110 000111 1123332 488999988844478898876543 57
Q ss_pred cccCHHHHHHHHHhcCCEEEEeCCC-CCCC-----CCccCCCCeEEEeCCCCccccCccceEEEEEcCH-HHHHHHHHHh
Q 013079 204 AVANIPELSRLAHDKGVTVVVDNTF-SPLV-----LSPARLGADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLH 276 (450)
Q Consensus 204 ~v~~l~~I~~la~~~gi~livD~~~-~~~~-----~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~ 276 (450)
...|+++|.++|+++|+++++|+++ .+.. ..+.. ++|++++|+||+++++. ||+++++. .+.+.++...
T Consensus 181 ~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~~ 256 (416)
T PRK13034 181 RELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFP-HAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSAV 256 (416)
T ss_pred cccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCC-CceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhhc
Confidence 8889999999999999999999996 2221 11222 58999999999996554 57776654 4444444332
Q ss_pred hhhhhccCCCchHHHHHH--HHccCC-cHHHHHHHHHHHHHHHHHHHHhCCCeeeC
Q 013079 277 QGALMLLGPTMNPKVAFE--LSERIP-HLGLRMKEHCHRALIFARRMKKLGLKVLY 329 (450)
Q Consensus 277 ~~~~~~~g~~~~~~~a~~--~~~~~~-~l~~~~~~~~~~~~~l~~~L~~~~~~v~~ 329 (450)
... ...+..+...++.. +...++ ...++.++..++.++|++.|++.|+.+..
T Consensus 257 ~~~-~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~ 311 (416)
T PRK13034 257 FPG-LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVS 311 (416)
T ss_pred CCc-ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEecc
Confidence 211 01112222222211 111221 22344677889999999999988876543
No 227
>PRK04311 selenocysteine synthase; Provisional
Probab=99.87 E-value=8.8e-21 Score=192.26 Aligned_cols=240 Identities=21% Similarity=0.173 Sum_probs=171.7
Q ss_pred HHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCch
Q 013079 73 PETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYG 152 (450)
Q Consensus 73 ~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~ 152 (450)
.+++.+++... .|....+..++. .+..+.+++.+|+++|++.++++++ |+.|+++++.+ +.+||+||+++.+|.
T Consensus 103 ~eav~~~~~~~-~~le~~l~~g~~-g~r~~~~e~~lA~l~Gae~a~vv~s---gtaAl~l~l~~-l~~GdeVIvs~~e~~ 176 (464)
T PRK04311 103 IEAVTEAARGY-SNLEYDLATGKR-GSRDRALAALLCALTGAEDALVVNN---NAAAVLLALNA-LAAGKEVIVSRGELV 176 (464)
T ss_pred HHHHHHHHhcc-cccccchhhccc-chHHHHHHHHHHHHhCCCeEEEECC---HHHHHHHHHHH-hCCCCEEEEcchhhh
Confidence 46666666542 232211112333 3557899999999999999999999 99999998865 578999999987654
Q ss_pred h---HHHHHHHhCCCccCeeEEEeCC---CCHHHHHHhhhcCCceEEEEecCCCC--cc--cccCHHHHHHHHHhcCCEE
Q 013079 153 G---THALLTHFFPRACNITTTFVDI---SDHEMVNSAIVQGRTKVLYFESISNP--TL--AVANIPELSRLAHDKGVTV 222 (450)
Q Consensus 153 ~---~~~~~~~~~~~~~g~~v~~v~~---~d~~~l~~ai~~~~t~lv~i~~~~Np--tG--~v~~l~~I~~la~~~gi~l 222 (450)
. ... +.....+ .|+++.+++. .+++++++++ +++|++|++++++|+ +| ...|+++|+++||++|+++
T Consensus 177 ~~ggs~~-i~~~~~~-~G~~l~~v~~~~~t~~~dle~aI-~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~v 253 (464)
T PRK04311 177 EIGGAFR-IPDVMRQ-AGARLVEVGTTNRTHLRDYEQAI-NENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPV 253 (464)
T ss_pred hcCcchh-hHHHHHH-CCcEEEEECCCCCCCHHHHHHhc-CccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeE
Confidence 2 222 1222333 7999988875 3788999999 889999999999998 34 5689999999999999999
Q ss_pred EEeCCCCCC-------------CCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhh-hhhccCCCch
Q 013079 223 VVDNTFSPL-------------VLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG-ALMLLGPTMN 288 (450)
Q Consensus 223 ivD~~~~~~-------------~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~-~~~~~g~~~~ 288 (450)
++|+..+.+ ..++.+.|+|++++|++|++|+|. +|+++++++++++++...-. .....+.++.
T Consensus 254 ivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~---~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~ 330 (464)
T PRK04311 254 VYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ---AGIIVGKKELIARLKKHPLKRALRVDKLTLA 330 (464)
T ss_pred EEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCc---eEEEEEcHHHHHHHhhchhHHHHhcchHHHH
Confidence 999953211 124455799999999999999874 59999999888877531110 1112244455
Q ss_pred HHHHHHH--------Hcc---CCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013079 289 PKVAFEL--------SER---IPHLGLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 289 ~~~a~~~--------~~~---~~~l~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
+..+.+. ... ++.+..+++++.++++.+.++|+.+.
T Consensus 331 ~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 331 ALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 5444432 112 23356677888999999999998864
No 228
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.87 E-value=6.6e-20 Score=173.97 Aligned_cols=267 Identities=19% Similarity=0.188 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHhC----------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 101 VLNLSRQMAALEG----------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 101 ~~~l~~~iA~l~g----------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
...+++.+|+++. ++.+++|+| +|.|++++...|+.|||..+++.|.|++.-.-+. -+ .|+++
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G---~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~---~r-Tgvei 195 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDPERVVVTNG---ATSANETLMFCLADPGDAFLVPTPYYPGFDRDLR---WR-TGVEI 195 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCccceEEecc---cchhhHHHHHHhcCCCceeeecCCCCCcccccce---ec-cCceE
Confidence 3456777777653 467899999 9999999999999999999999999999865543 23 68888
Q ss_pred EEeCCC-------CHHHHHHhhhc-----CCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-
Q 013079 171 TFVDIS-------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS- 234 (450)
Q Consensus 171 ~~v~~~-------d~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~- 234 (450)
+.|... +.+++|+++.+ .+++.|+|.+|+||.|++.+ +..+..+|.++|+.+|+||+|..-.++
T Consensus 196 vpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~ 275 (471)
T KOG0256|consen 196 VPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDK 275 (471)
T ss_pred EEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCc
Confidence 777543 57888887732 36889999999999999976 557777788999999999999332221
Q ss_pred -----cc--------CCCCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhhhhhhccCCC--chHHHHHHHHcc
Q 013079 235 -----PA--------RLGADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPT--MNPKVAFELSER 298 (450)
Q Consensus 235 -----~~--------~~g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~--~~~~~a~~~~~~ 298 (450)
.+ ..+..-++.|+||-+|.||.|+ |+++. ++++.....++.. .+.. ..+.....++..
T Consensus 276 ~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRv-GviYS~ne~VvsaA~kmss-----f~~vSs~tQ~~la~LLSD 349 (471)
T KOG0256|consen 276 SEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRV-GVIYSNNEDVVSAATKMSS-----FGLVSSQTQYLLASLLSD 349 (471)
T ss_pred cCceEHHHHhhccccCCCcEEEEEEeccccCCCceEE-EEEEecChHHHHHHHHHhh-----ccCCcHHHHHHHHHHhch
Confidence 11 1245678999999999999998 88876 5667777666554 3332 233333333333
Q ss_pred CC----cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC------CHHHHHHH
Q 013079 299 IP----HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME------TEEKANRL 368 (450)
Q Consensus 299 ~~----~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~------~~~~~~~~ 368 (450)
.+ .+.+..+|++.+..++.+.|+++++..... +.|.++|+++. +.+.-..+
T Consensus 350 ~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s-------------------~AGlF~wvDlr~lL~s~tfe~El~L 410 (471)
T KOG0256|consen 350 EEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKS-------------------NAGLFCWVDLRKLLTSLTFEGELEL 410 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeec-------------------CCeeEEEEEhHHhcCcCChHHHHHH
Confidence 22 244555667778889999999988754321 57889999886 22211223
Q ss_pred HHHhh-ccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC
Q 013079 369 MNYLQ-NYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL 425 (450)
Q Consensus 369 ~~~l~-~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~ 425 (450)
.+.+- ..+ +-+|.|+.|-. . .+|+.|+.|. .
T Consensus 411 w~~i~~~vk----lnlSpG~s~~C------~---------------EpGWFRvcFA-n 442 (471)
T KOG0256|consen 411 WERILDNVK----LNLSPGSSCHC------H---------------EPGWFRVCFA-N 442 (471)
T ss_pred HHHHHHhhc----cccCCCCccee------c---------------CCCeEEEEec-c
Confidence 33322 112 56788866422 1 1699999999 5
No 229
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.87 E-value=4.7e-20 Score=185.46 Aligned_cols=221 Identities=17% Similarity=0.136 Sum_probs=156.4
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC-
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI- 175 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~- 175 (450)
+.+...+|++.+++++|.+.+++|+| |++|+.+++.+++++||.| ++++.|..+...+. ..|.++++++.
T Consensus 51 ~~~g~~~Leeaia~~~g~~~vv~t~~---Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~-----~~Ga~pv~v~i~ 121 (431)
T cd00617 51 GSKSFYDLEDAVQDLFGFKHIIPTHQ---GRGAENILFSILLKPGRTV-PSNMHFDTTRGHIE-----ANGAVPVDLVID 121 (431)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEcCC---HHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHH-----hCCCEeEEEecc
Confidence 45668899999999999999999999 9999999999999999977 58888888877664 35666666544
Q ss_pred --------------CCHHHHHHhhhcCC----ceEEEEecCCCCc-ccccC---HHHHHHHHHhcCCEEEEeCCC-CC--
Q 013079 176 --------------SDHEMVNSAIVQGR----TKVLYFESISNPT-LAVAN---IPELSRLAHDKGVTVVVDNTF-SP-- 230 (450)
Q Consensus 176 --------------~d~~~l~~ai~~~~----t~lv~i~~~~Npt-G~v~~---l~~I~~la~~~gi~livD~~~-~~-- 230 (450)
.|+++|++++ +++ +++|++++|+||+ |.+.+ +++|.++|++||+++|.|+++ ..
T Consensus 122 ~~~~~~~~~pf~gniD~e~Le~~I-~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na 200 (431)
T cd00617 122 EAHDAQELIPFKGNIDVAKLEKLI-DEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENA 200 (431)
T ss_pred cccccccccCCCCCcCHHHHHHHh-CcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhh
Confidence 2789999999 544 8899999999998 78765 568899999999999999995 11
Q ss_pred -C------CC---CccCC------CCeEEEeCCCCccccCccceEEEEEcCH-HHHHHHHHHhh---hhhhccCCCchHH
Q 013079 231 -L------VL---SPARL------GADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQ---GALMLLGPTMNPK 290 (450)
Q Consensus 231 -~------~~---~~~~~------g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~---~~~~~~g~~~~~~ 290 (450)
+ .+ ++.+. ..|.++.|++|..+.+ +||++++++ +++++++.... +.....|......
T Consensus 201 ~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~ 277 (431)
T cd00617 201 YFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDM 277 (431)
T ss_pred hhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHH
Confidence 1 11 11111 3688888888877654 578998876 58888765321 1111122222222
Q ss_pred HHHH-HHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013079 291 VAFE-LSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPG 331 (450)
Q Consensus 291 ~a~~-~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 331 (450)
.|.+ .+..... ...+++..+++++|.+.|++.|+.+..|.
T Consensus 278 ~A~A~gL~e~~~-~~~l~~~~~~r~~l~~~L~~~G~~v~~P~ 318 (431)
T cd00617 278 EALAQGLREAVE-EDYLRHRVEQVRYLGDRLDEAGVPIVEPA 318 (431)
T ss_pred HHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHCCCCccCCC
Confidence 3222 2222111 23445555566889999999988766554
No 230
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.87 E-value=1.3e-20 Score=190.13 Aligned_cols=252 Identities=16% Similarity=0.246 Sum_probs=165.4
Q ss_pred CCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCC-------CEEEEeCCCchhHHHHHHHhCCCc---
Q 013079 96 HFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSG-------GHVVAARTLYGGTHALLTHFFPRA--- 165 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~g-------d~Vi~~~~~y~~~~~~~~~~~~~~--- 165 (450)
+..+...++++.++++.+.+.+++|+| |++|+.++++.+...+ ++|++..+.|+++...........
T Consensus 78 ~~~~~~~~la~~l~~~~~~~~v~~~~g---g~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 154 (396)
T PRK02627 78 YYIEPQEELAEKLVELSGMDKVFFCNS---GAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQ 154 (396)
T ss_pred cCCHHHHHHHHHHHhhcCCCEEEECCC---cHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCcccc
Confidence 457889999999999999999999999 9999999998665332 679999999987654332111000
Q ss_pred -----cCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCccc-cc---CHHHHHHHHHhcCCEEEEeCCCCCCCCCc-
Q 013079 166 -----CNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLA-VA---NIPELSRLAHDKGVTVVVDNTFSPLVLSP- 235 (450)
Q Consensus 166 -----~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~-v~---~l~~I~~la~~~gi~livD~~~~~~~~~~- 235 (450)
....+..++..|++++++++ .+++++|++++++||+|. +. .+++|.++|+++|+++|+||+|+++....
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~i-~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~ 233 (396)
T PRK02627 155 EGFEPLVEGFIYVPFNDIEALKAAI-TDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK 233 (396)
T ss_pred ccCCCCCCCceEeCCCCHHHHHHhc-CCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc
Confidence 01122444555899999999 788999999999999994 43 38899999999999999999996553211
Q ss_pred ----cCC--CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHH
Q 013079 236 ----ARL--GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEH 309 (450)
Q Consensus 236 ----~~~--g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~ 309 (450)
... ..|++ |+||.++ +|+|+ |++++++++++.+..... .....++.+.+.++..++..++. ....++.
T Consensus 234 ~~~~~~~~~~pdi~--t~sK~~~-~G~ri-g~~~~~~~~~~~~~~~~~-~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~ 307 (396)
T PRK02627 234 LFAYQHYGIEPDIM--TLAKGLG-GGVPI-GAVLAKEKVADVFTPGDH-GSTFGGNPLACAAALAVIEIIEE-EGLLENA 307 (396)
T ss_pred eeeehhcCCCCCEE--EEcchhh-CCccc-EEEEEcHHHHhccCCCCC-CCCCCCCHHHHHHHHHHHHHHhh-ccHHHHH
Confidence 112 34554 5899999 78998 999898888877653222 11233344444444444332221 1223444
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 310 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
+++.+++.+.|++..... |... ...+.|.++++.++. ....|...+..
T Consensus 308 ~~~~~~~~~~l~~~~~~~--~~~~-------------~~~~~g~~~~i~~~~--~~~~~~~~l~~ 355 (396)
T PRK02627 308 AEVGEYLRAKLRELLEKY--PGIK-------------EVRGLGLMIGIELDR--PAAEIVKKALE 355 (396)
T ss_pred HHHHHHHHHHHHHHHHhC--CCee-------------eeccCcEEEEEEecC--cHHHHHHHHHH
Confidence 555556666665432111 1100 011467789998842 24567776654
No 231
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.87 E-value=4.1e-20 Score=189.48 Aligned_cols=291 Identities=16% Similarity=0.195 Sum_probs=194.3
Q ss_pred hhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhc-cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 99 PTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLC-SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
..+.++++.+++++|.+ .+++|+| |++++.+++.++. .+||+|+++++.|+++...+..+... .|.+++.++.
T Consensus 112 ~~~~e~~~~la~l~g~~~~~v~~~~g---~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~-~G~~~~~v~~ 187 (447)
T PRK00451 112 QAIFEYQTMICELTGMDVANASMYDG---ATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKG-QGIEVVEVPY 187 (447)
T ss_pred HHHHHHHHHHHHHhCCCcceEEecCc---HHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHh-CCcEEEEecC
Confidence 44566668889999975 4689999 9999998888774 68999999999999988887544333 6888888876
Q ss_pred C----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE--eCCCCCCCCCccCCCCeEEEeCCCC
Q 013079 176 S----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV--DNTFSPLVLSPARLGADVVVHSISK 249 (450)
Q Consensus 176 ~----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv--D~~~~~~~~~~~~~g~di~~~S~sK 249 (450)
+ |++++++++ +++|++|++++| |+||.+.|+++|+++|+++|+++++ |.+..+....+.++++|+++.|.+|
T Consensus 188 ~~~~~d~~~l~~~i-~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~~g~~~~~~~~~~D~~~~s~~k 265 (447)
T PRK00451 188 EDGVTDLEALEAAV-DDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVSLGLLKPPGEYGADIVVGEGQP 265 (447)
T ss_pred CCCCCCHHHHHHhc-CCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHHhccCCCcccCCCCEEEECCCc
Confidence 5 899999999 889999999999 8999999999999999999999998 6543223334567799999997766
Q ss_pred c---cccCccceEEEEEcCHHHHHHHHH-------------------------Hhhh-hhhccCCC-chH-HHHHHHHc-
Q 013079 250 F---ISGGADIIAGAVCGPANLVNSMMD-------------------------LHQG-ALMLLGPT-MNP-KVAFELSE- 297 (450)
Q Consensus 250 ~---~g~~g~~igG~l~~~~~~~~~l~~-------------------------~~~~-~~~~~g~~-~~~-~~a~~~~~- 297 (450)
+ +...|.++ |+++.++++++.+.. .+.. .....+.. ..+ ..++..+.
T Consensus 266 ~~~~~~~~Gpg~-G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~ 344 (447)
T PRK00451 266 LGIPLSFGGPYL-GFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSL 344 (447)
T ss_pred CCCCCCCCCCCc-hHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 4 33334445 999888877766310 0000 00011111 111 22222221
Q ss_pred -cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcc
Q 013079 298 -RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNY 375 (450)
Q Consensus 298 -~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~ 375 (450)
..+.+.+..+++.++++++.+.|++++. .+. ++ ..-.++.+.++. ...++.+.|...
T Consensus 345 ~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~------------------~~~~~~~v~~~~--~~~~~~~~L~~~ 403 (447)
T PRK00451 345 LGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-DG------------------PFFNEFVVRLPK--PAEEVNEALLEK 403 (447)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-CC------------------CeEEEEEEecCC--CHHHHHHHHHhc
Confidence 2234666677889999999999998753 442 21 011133455541 245677777642
Q ss_pred ccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 376 AQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 376 ~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
| +.+.+ +..... .+. .+.+|+|++ ..++++.++.|.++|+++
T Consensus 404 ---g-i~~~~---------~~~~~~----------~~~-~~~~rvs~~-~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 404 ---G-ILGGY---------DLGRYY----------PEL-GNHLLVCVT-EKRTKEDIDALVAALGEV 445 (447)
T ss_pred ---C-CCCCc---------cccccc----------CCc-CCEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 2 11110 000000 011 368999999 878888999999998865
No 232
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.1e-20 Score=182.10 Aligned_cols=290 Identities=18% Similarity=0.280 Sum_probs=199.2
Q ss_pred CCCChhHHHHHHHHHHHhC-CCeEEEecChHHHHHHHHHHHHHhcc----C-CCEEEEeCCCchhHHH-HH----H----
Q 013079 95 RHFNPTVLNLSRQMAALEG-TEAAYCTASDKAGMSAISSVLMQLCS----S-GGHVVAARTLYGGTHA-LL----T---- 159 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g-~~~~~~tsg~~~gt~ai~~al~~l~~----~-gd~Vi~~~~~y~~~~~-~~----~---- 159 (450)
-+.++...+|.+.|+++.+ .+.++|++| |+||+..|++...+ + ..+||.....||+-.. .+ +
T Consensus 80 ~~~~~~~~~la~~L~~~s~~~d~vff~NS---GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~ 156 (404)
T COG4992 80 LFYNEPQAELAEKLVELSPFADRVFFCNS---GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYR 156 (404)
T ss_pred ccCChHHHHHHHHHHhhCccccEEEEcCC---cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhc
Confidence 3557889999999999996 899999999 99999999986422 1 2379988888876321 11 1
Q ss_pred -HhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCC
Q 013079 160 -HFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLS 234 (450)
Q Consensus 160 -~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~ 234 (450)
.+.|. . -.+++++..|++++++++ +++|.+|++|.++.+.|.+.+ ++++.++|++||+++|.||+|+++...
T Consensus 157 ~~F~Pl-~-~g~~~vpfnDi~al~~ai-~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRT 233 (404)
T COG4992 157 KGFGPL-L-PGFRHVPFNDIEALEAAI-DEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRT 233 (404)
T ss_pred cCCCCC-C-CCceecCCCCHHHHHHHh-ccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCcc
Confidence 12222 1 245677788999999999 889999999999999999965 889999999999999999999777532
Q ss_pred -------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHH
Q 013079 235 -------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMK 307 (450)
Q Consensus 235 -------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~ 307 (450)
-.....|+++ +.|.+|+ |.+| |+++.++.+.+.+..... ..++.|+.+...++...+.-+.. +...+
T Consensus 234 Gk~fA~e~~gV~PDI~t--laK~LgG-G~Pi-gA~la~~~~~~~~~~G~H-gSTfGGNpLacAv~~a~l~~l~~-e~ll~ 307 (404)
T COG4992 234 GKLFAYEHYGVEPDILT--LAKALGG-GFPI-GAMLATEEIASAFTPGDH-GSTFGGNPLACAVALAVLEVLLE-EGLLE 307 (404)
T ss_pred chHHHHHHhCCCCCEEE--eeccccC-Cccc-eeeEEchhhhhcCCCCcc-cCCCCcCHHHHHHHHHHHHHHcc-hhHHH
Confidence 1223468887 9999995 5999 777666554554443333 34455555555555444433221 22334
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccc
Q 013079 308 EHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGY 387 (450)
Q Consensus 308 ~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~ 387 (450)
+.++..+++.+.|+++..+ +|-+ .+.+|.|.++.+++.....+..++..+.. .|++....|
T Consensus 308 ~v~~~g~~~~~~L~~l~~~--~~~v-------------~~vRG~GLmiGiel~~~~~a~~~~~~~~~---~gvL~~~a~- 368 (404)
T COG4992 308 NVREKGEYLLQRLRELKRR--YPLV-------------KEVRGRGLMIGIELKEPYRARDIVRALRE---EGVLVLPAG- 368 (404)
T ss_pred HHHHHHHHHHHHHHHHhhc--CCce-------------eeeecceeEEEEEecCcccHHHHHHHHHH---CCeEEecCC-
Confidence 4556667777777765321 1211 13458999999999854346677777764 333333332
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC----CCHHHHHHHHHHHHHHhh
Q 013079 388 YETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL----GTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 388 ~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~----~~~~~~i~~l~~al~~~~ 443 (450)
++.|||... + +++++.++.|++++....
T Consensus 369 ---------------------------~~ViR~~Pp-L~i~~eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 369 ---------------------------PNVIRFLPP-LVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred ---------------------------CCeEEecCC-ccCCHHHHHHHHHHHHHHHHHhh
Confidence 457888877 5 666677777777777554
No 233
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.87 E-value=2.1e-20 Score=188.19 Aligned_cols=252 Identities=16% Similarity=0.173 Sum_probs=164.3
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh----ccCCC----EEEEeCCCchhHHHHHHHhCCC--c-
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL----CSSGG----HVVAARTLYGGTHALLTHFFPR--A- 165 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l----~~~gd----~Vi~~~~~y~~~~~~~~~~~~~--~- 165 (450)
.++...+++++|+++.+.+.++|++| |++|+..+++.+ ..+|| +|++.++.|++........... .
T Consensus 71 ~~~~~~~la~~l~~~~~~~~v~~~~s---GseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~ 147 (389)
T PRK01278 71 RIPEQERLAERLVENSFADKVFFTNS---GAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYL 147 (389)
T ss_pred CChHHHHHHHHHHhhCCCCEEEEcCC---cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhc
Confidence 46778899999999988889999999 999999999876 34555 8999999999876544211000 0
Q ss_pred cC-----eeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCccccc----CHHHHHHHHHhcCCEEEEeCCCCCCCCCc-
Q 013079 166 CN-----ITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA----NIPELSRLAHDKGVTVVVDNTFSPLVLSP- 235 (450)
Q Consensus 166 ~g-----~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~----~l~~I~~la~~~gi~livD~~~~~~~~~~- 235 (450)
.+ ..+..++..|++++++++ ++++++|++++++|++|.+. .+++|.++|++||+++|+||+|+++....
T Consensus 148 ~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~ 226 (389)
T PRK01278 148 EGFGPLVPGFDQVPFGDIEALKAAI-TPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK 226 (389)
T ss_pred ccCCCCCCCceEeCCCCHHHHHHhh-CCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc
Confidence 00 112334556999999999 77899999999999998443 58999999999999999999996553211
Q ss_pred ------cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHH
Q 013079 236 ------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEH 309 (450)
Q Consensus 236 ------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~ 309 (450)
.....|+ .|++|.++ +|+|+ |++++++++++.+..... ..+..++.+.+.++...+..++. ....++.
T Consensus 227 ~~~~~~~~~~pdi--~t~sK~l~-~G~~i-g~~~~~~~~~~~~~~~~~-~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~ 300 (389)
T PRK01278 227 LFAHEWAGVTPDI--MAVAKGIG-GGFPL-GACLATEEAAKGMTPGTH-GSTYGGNPLAMAVGNAVLDVILA-PGFLDNV 300 (389)
T ss_pred ceeecccCCCCCE--EEEehhcc-CCcce-EEEEEcHHHHhccCCCCC-CCCCCccHHHHHHHHHHHHHHhh-hHHHHHH
Confidence 1223455 46999999 68998 888888888776643322 22223333333333333332211 1223445
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 310 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
.++.+++.+.|+++... .|.+.. ...+.|.++++++.. ....|...|..
T Consensus 301 ~~~~~~l~~~l~~l~~~--~~~~~~------------~v~g~G~~~~i~~~~--~~~~~~~~l~~ 349 (389)
T PRK01278 301 QRMGLYLKQKLEGLVDR--FPDVIE------------EVRGKGLLLGLKCVV--PNRDLVQALRD 349 (389)
T ss_pred HHHHHHHHHHHHHHHhh--CCCcee------------eEecccEEEEEEEec--CHHHHHHHHHH
Confidence 55566666666543110 110000 112567788888853 24567776654
No 234
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=5.7e-19 Score=172.12 Aligned_cols=322 Identities=20% Similarity=0.240 Sum_probs=215.2
Q ss_pred HHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCc
Q 013079 73 PETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLY 151 (450)
Q Consensus 73 ~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y 151 (450)
.+.+.+.++..| ++. .+.++++++.+|++.|++.++.++| ||.|+.++++++ +.+||+||+++.+|
T Consensus 18 ~~~v~~vl~sg~--------i~~--G~~v~~FE~~~ae~~G~k~ava~~s---gT~AL~laL~al~ig~GDeVI~ps~Tf 84 (374)
T COG0399 18 LAAVQEVLKSGW--------LTG--GPFVRRFEQAFAEYLGVKYAVAVSS---GTAALHLALLALAIGPGDEVIVPSFTF 84 (374)
T ss_pred HHHHHHHHHcCC--------eec--ChHHHHHHHHHHHHhCCCeEEEecC---hHHHHHHHHHhcCCCCCCEEEecCCch
Confidence 567777775432 222 5789999999999999999999999 999999999966 68999999999999
Q ss_pred hhHHHHHHHhCCCccCeeEEEeCCC------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEe
Q 013079 152 GGTHALLTHFFPRACNITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 152 ~~~~~~~~~~~~~~~g~~v~~v~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD 225 (450)
.++...+. ..|.+++++|++ |++.|+++| +++||+|+. -+--|...|+++|.++|++||++||.|
T Consensus 85 vATan~i~-----~~Ga~PVFvDid~~T~nid~~~ie~aI-t~~tKAIip---Vhl~G~~~dm~~i~~la~~~~l~vIED 155 (374)
T COG0399 85 VATANAVL-----LVGAKPVFVDIDPDTLNIDPDLIEAAI-TPRTKAIIP---VHLAGQPCDMDAIMALAKRHGLPVIED 155 (374)
T ss_pred HHHHHHHH-----HcCCeEEEEecCCcccCCCHHHHHHHc-ccCCeEEEE---ehhccCCCCHHHHHHHHHHcCCeEEEE
Confidence 99988875 479999999987 899999999 889999985 445788999999999999999999999
Q ss_pred CCC-CCCCCCccCCC--CeEEEeCC--CCccccCccceEEEEEc-CHHHHHHHHHHhhhhhhc----------cC--CCc
Q 013079 226 NTF-SPLVLSPARLG--ADVVVHSI--SKFISGGADIIAGAVCG-PANLVNSMMDLHQGALML----------LG--PTM 287 (450)
Q Consensus 226 ~~~-~~~~~~~~~~g--~di~~~S~--sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~----------~g--~~~ 287 (450)
+++ -+-.+.....| .|+.++|| +|.+.... ||+++. ++++.++++.++.+.... .| .-+
T Consensus 156 aAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgE---GGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm 232 (374)
T COG0399 156 AAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGE---GGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRL 232 (374)
T ss_pred cchhccCeecCcccccccceEEEEecCCCCccccC---ceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCH
Confidence 998 22223333333 35666665 69888442 687765 567888887665533211 22 224
Q ss_pred hHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-HHHH
Q 013079 288 NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-EKAN 366 (450)
Q Consensus 288 ~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-~~~~ 366 (450)
....|+..+..++.+++..++.++.++.+.+.|++++. +..|..+..-.|. =.+..+.++.. ...+
T Consensus 233 ~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~-~~~p~~~~~~~~~------------~~~~~i~~~~~~~~R~ 299 (374)
T COG0399 233 TEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPG-ITLPPEPDGAVHA------------WHLYTILVDEEGISRD 299 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCCceee------------eeeeEEEecCCCCCHH
Confidence 45566666667788888888888888889999987753 2222211110110 01444555532 2346
Q ss_pred HHHHHhhccccccccccccccccc-ccccccccc-----CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 367 RLMNYLQNYAQFGFMAVSLGYYET-LMSCSGSST-----SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 367 ~~~~~l~~~~~~g~i~vs~G~~~s-~~~~~~~~~-----~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
.+++.|+..+ +. .+..+. +-.++.... ...++..+.. ....+++-+. ..-.++.++.+.++|.
T Consensus 300 ~l~~~L~~~g----i~--~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~----~~r~l~LP~~-p~l~~~~~~~V~~~l~ 368 (374)
T COG0399 300 ALMESLKEAG----VG--AVVYFRPLHLQPAYRQLGYFPEGDLPNAEDL----SERILSLPLH-PNLSEEDVDRVIEALK 368 (374)
T ss_pred HHHHHHHhCC----CC--ceEEeeccccchhhhcccccccCCCchHHHH----hhCeEEccCC-CCCCHHHHHHHHHHHH
Confidence 6777777522 22 211111 111111110 0123333222 2567888777 6666777777777776
Q ss_pred Hhh
Q 013079 441 RMQ 443 (450)
Q Consensus 441 ~~~ 443 (450)
++-
T Consensus 369 ~~~ 371 (374)
T COG0399 369 EVL 371 (374)
T ss_pred HHh
Confidence 653
No 235
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.85 E-value=1.4e-19 Score=182.95 Aligned_cols=286 Identities=16% Similarity=0.177 Sum_probs=185.5
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc--------cCCCEEEEeCCCchhHHHHHHH--------
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC--------SSGGHVVAARTLYGGTHALLTH-------- 160 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~--------~~gd~Vi~~~~~y~~~~~~~~~-------- 160 (450)
.++...++++.|+++.+.+.++|++| |++|+..+++... ...+.|+..+..||+.......
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~s---GseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~ 156 (403)
T PRK05093 80 TNEPALRLAKKLIDATFAERVFFANS---GAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYS 156 (403)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCc---hHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhh
Confidence 35567799999999988889999999 9999999998541 1235788888888886432211
Q ss_pred --hCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccc-cC----HHHHHHHHHhcCCEEEEeCCCCCCCC
Q 013079 161 --FFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAV-AN----IPELSRLAHDKGVTVVVDNTFSPLVL 233 (450)
Q Consensus 161 --~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v-~~----l~~I~~la~~~gi~livD~~~~~~~~ 233 (450)
+.+ ....+..++..|++++++.+ .+++++|++++ .|++|.+ .+ +++|.++|++||+++|+||+|+++..
T Consensus 157 ~~~~~--~~~~~~~~~~~d~~~l~~~l-~~~~aaiiiep-~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~ 232 (403)
T PRK05093 157 DGFGP--KPADITHVPFNDLAAVKAVI-DDHTCAVVVEP-IQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGR 232 (403)
T ss_pred hcCCC--CCCCcEEeCCCCHHHHHHHh-cCCeEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence 111 12245667777999999999 77899999994 5555554 33 89999999999999999999965533
Q ss_pred Cc-------cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHH
Q 013079 234 SP-------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRM 306 (450)
Q Consensus 234 ~~-------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~ 306 (450)
.. ..+..|+ .|++|.++ +|+|+ ||+++++++++.+...... ....++.+.+.++..++..+. ..+..
T Consensus 233 ~g~~~~~~~~~~~pdi--~s~sK~l~-~G~ri-g~vv~~~~i~~~l~~~~~~-~t~~~~~~~~~aa~a~L~~~~-~~~~~ 306 (403)
T PRK05093 233 TGDLFAYMHYGVTPDI--LTSAKALG-GGFPI-GAMLTTAEIASHFKVGTHG-STYGGNPLACAVAEAVFDIIN-TPEVL 306 (403)
T ss_pred CccchhhhhcCCCCCE--EEeccccc-CCcce-EEEEEcHHHHhhcCCCCCC-CCCCCCHHHHHHHHHHHHHHh-hccHH
Confidence 21 1123554 57999999 78998 9999999888877543221 122333444444433333322 12345
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhccccccccccc
Q 013079 307 KEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVS 384 (450)
Q Consensus 307 ~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~~~~~l~~~~~~g~i~vs 384 (450)
++++++++++.+.|++++....... ...+.|.++++.++.. ....+|...+... | +.+.
T Consensus 307 ~~~~~~~~~l~~~L~~~~~~~~~~~---------------~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~---G-v~v~ 367 (403)
T PRK05093 307 EGVKARRQRFVDGLQKINQKYGVFS---------------EIRGMGLLIGAELKPQYKGRARDFLNAAAEE---G-VMVL 367 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeE---------------eEeeCceEEEEEecCcchhHHHHHHHHHHHC---C-eEEe
Confidence 6678888899999987632110000 1114677899998642 2356777776542 2 2221
Q ss_pred cccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 385 LGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 385 ~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.+ ..+.|||+++ ....++.++.+.+.|.++
T Consensus 368 ~~---------------------------g~~~lRl~~~-~~~~~~~i~~~~~~l~~~ 397 (403)
T PRK05093 368 VA---------------------------GPDVLRFAPS-LVIEEADIDEGLARFEKA 397 (403)
T ss_pred cC---------------------------CCCEEEEeCC-CCCCHHHHHHHHHHHHHH
Confidence 10 1368999988 654455555555555443
No 236
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.85 E-value=2.6e-19 Score=180.45 Aligned_cols=253 Identities=15% Similarity=0.152 Sum_probs=169.6
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc--------cCCCEEEEeCCCchhHHHHHHHhCC--C--
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC--------SSGGHVVAARTLYGGTHALLTHFFP--R-- 164 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~--------~~gd~Vi~~~~~y~~~~~~~~~~~~--~-- 164 (450)
.++...+|+++|+++.+.+.++|++| |++|+..+++.+. ...++|+..+..||+.......... .
T Consensus 75 ~~~~~~~la~~L~~~~~~~~~~f~~S---GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~ 151 (397)
T TIGR03246 75 TNEPVLRLAKKLVDATFADKVFFCNS---GAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYS 151 (397)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 46778899999999998889999999 9999999998652 1235788888888886432211100 0
Q ss_pred ----ccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCccccc----CHHHHHHHHHhcCCEEEEeCCCCCCCCC--
Q 013079 165 ----ACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA----NIPELSRLAHDKGVTVVVDNTFSPLVLS-- 234 (450)
Q Consensus 165 ----~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~----~l~~I~~la~~~gi~livD~~~~~~~~~-- 234 (450)
.....+..++.+|++++++.+ .+++++|++++++++.|.+. .+++|.++|++||+++|+||+|+++...
T Consensus 152 ~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~ 230 (397)
T TIGR03246 152 QGFAPLPGGIKHAPYNDLAAAKALI-SDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE 230 (397)
T ss_pred cCCCCCCCceEEeCCCCHHHHHHHh-ccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcccc
Confidence 011234566777999999999 77899999998888888663 3999999999999999999998555321
Q ss_pred ---c--cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHH
Q 013079 235 ---P--ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEH 309 (450)
Q Consensus 235 ---~--~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~ 309 (450)
. ....+|++ +++|.++ .|+++ |++++++++++.+..... ..+..++.+.+.++...+..++. ....++.
T Consensus 231 ~~a~~~~gv~pDi~--t~~K~lg-gG~pi-gav~~~~~i~~~~~~~~~-~~t~~~~p~~~aaa~a~l~~~~~-~~l~~~~ 304 (397)
T TIGR03246 231 LYAYMHYGVTPDIL--TSAKALG-GGFPI-GAMLTTTEIAAHLKVGTH-GTTYGGNPLACAVAGKVLDLVNT-PELLAGV 304 (397)
T ss_pred chhhhhcCCCCCEE--Eeehhhh-CCcce-eEEEEcHHHHHhccCCCc-CCCCCCCHHHHHHHHHHHHHHhh-ccHHHHH
Confidence 1 12245666 5899998 57898 888888888877753222 22233444444444333332221 2345667
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhc
Q 013079 310 CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQN 374 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~~~l~~ 374 (450)
+++.+++.+.|++++.+. +-.. +.+|.|.++.+++.. ......|...|..
T Consensus 305 ~~~~~~l~~~L~~l~~~~--~~~~-------------~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~ 356 (397)
T TIGR03246 305 KQRHDLFVDGLEKINARY--NVFS-------------EIRGKGLLIGAVLTEAYQGKAKQFVNAAAE 356 (397)
T ss_pred HHHHHHHHHHHHHHHhcC--CCeE-------------eeecCceEEEEEEcCchhhHHHHHHHHHHH
Confidence 778888888887754211 1000 112567888888853 2345677777664
No 237
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.85 E-value=5.4e-19 Score=167.22 Aligned_cols=311 Identities=20% Similarity=0.181 Sum_probs=206.5
Q ss_pred ccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCC
Q 013079 62 IEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSG 141 (450)
Q Consensus 62 i~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~g 141 (450)
-.+|.|..-+.++.+..+.+... ...-.|| .+|.++++++++++++|.+.++|++| ||.||.++|.+.++||
T Consensus 3 ~f~SDn~~g~~~~m~eam~~a~~---~~~~~YG--~D~~~~~~e~~~ae~~g~~a~~Fv~s---GT~aN~lal~~~~~~~ 74 (342)
T COG2008 3 DFRSDNVAGPTPEMREALAAANA---VGDDVYG--EDPTTNALEQRIAELFGKEAALFVPS---GTQANQLALAAHCQPG 74 (342)
T ss_pred ccccCccCCCCHHHHHHHHhccc---cCCCCCC--CCHHHHHHHHHHHHHhCCceEEEecC---ccHHHHHHHHHhcCCC
Confidence 45677887777666555554431 2233466 67999999999999999999999999 9999999999999999
Q ss_pred CEEEEeCCCchhHHHHH-HHhCCCccCeeEEEeCCC----CHHHHHHhhhcC-----CceEEEEecCCCCcccccC---H
Q 013079 142 GHVVAARTLYGGTHALL-THFFPRACNITTTFVDIS----DHEMVNSAIVQG-----RTKVLYFESISNPTLAVAN---I 208 (450)
Q Consensus 142 d~Vi~~~~~y~~~~~~~-~~~~~~~~g~~v~~v~~~----d~~~l~~ai~~~-----~t~lv~i~~~~NptG~v~~---l 208 (450)
+.|++....|-...+.- ..++. .+.+...++.. ++++|++++..+ .+.++++++.+|+.|++.+ +
T Consensus 75 ~~vi~~~~aHi~~~E~Ga~~~~~--~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el 152 (342)
T COG2008 75 ESVICHETAHIYTDECGAPEFFG--GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDEL 152 (342)
T ss_pred CeEEEeccccceecccCcHHHHc--CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHH
Confidence 99999887775443321 01111 13344444322 899999988432 3567777777779999987 5
Q ss_pred HHHHHHHHhcCCEEEEeCCC-----CCCCCCcc--CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhh
Q 013079 209 PELSRLAHDKGVTVVVDNTF-----SPLVLSPA--RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALM 281 (450)
Q Consensus 209 ~~I~~la~~~gi~livD~~~-----~~~~~~~~--~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~ 281 (450)
++|.++||++|+++|+|.+- ..+..+.. ..++|.++.++||.++.++ +.+++++.++++++..+++
T Consensus 153 ~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK---- 225 (342)
T COG2008 153 EAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRK---- 225 (342)
T ss_pred HHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHH----
Confidence 57888999999999999983 11121111 2279999999999999774 4667899999999988877
Q ss_pred ccCCCchHH--HHHHHHccCCc-HHHHHHHH-HHHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013079 282 LLGPTMNPK--VAFELSERIPH-LGLRMKEH-CHRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLC 356 (450)
Q Consensus 282 ~~g~~~~~~--~a~~~~~~~~~-l~~~~~~~-~~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 356 (450)
..|..+.+. .++..+..+++ +..+..++ .+.+.+|.+.|++. |.++..|. ..+++.
T Consensus 226 ~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~-------------------~tN~vf 286 (342)
T COG2008 226 RAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPV-------------------ETNMVF 286 (342)
T ss_pred HhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCC-------------------cccEEE
Confidence 445444332 22222222222 23333333 44588999999855 56776653 234788
Q ss_pred EEeCCHHH-HHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCC--CeEEEEeCCCCCHHHHHH
Q 013079 357 LDMETEEK-ANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISA--GLVRMSVGYLGTLDQRWS 433 (450)
Q Consensus 357 ~~l~~~~~-~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~--~~iRiS~g~~~~~~~~i~ 433 (450)
+.++.... ...+...+.. .| ..++. ..+|+-.. ..+.++.++
T Consensus 287 ~~l~~~~i~~l~~~~~~~~----------~~------------------------~~~~~~~~~vRfvts-~a~~~edv~ 331 (342)
T COG2008 287 VRLPESAIEALRLAGALFY----------RG------------------------VLIGAHGEIVRFVTS-WATSEEDVD 331 (342)
T ss_pred EECChHHHHHHHhhchhhe----------ee------------------------eeccCCCceEEEEee-ccCCHHHHH
Confidence 88874321 1111111111 00 00111 36999999 989999999
Q ss_pred HHHHHHHHhh
Q 013079 434 QFEKALSRMQ 443 (450)
Q Consensus 434 ~l~~al~~~~ 443 (450)
+|...++.+.
T Consensus 332 ~~~~~~~~~~ 341 (342)
T COG2008 332 ELVAAIKALL 341 (342)
T ss_pred HHHHHHHHhh
Confidence 9988887653
No 238
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.85 E-value=3.6e-19 Score=179.93 Aligned_cols=254 Identities=17% Similarity=0.145 Sum_probs=164.1
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc----------CCCEEEEeCCCchhHHHHHHHhCCC---
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS----------SGGHVVAARTLYGGTHALLTHFFPR--- 164 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~----------~gd~Vi~~~~~y~~~~~~~~~~~~~--- 164 (450)
.+..+.+++.++++.+.+.++|++| |++|+..+++.+.. .+++|++.+-.|++...........
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~S---Gs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~ 148 (400)
T PTZ00125 72 NDVLGLAEKYITDLFGYDKVLPMNS---GAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKC 148 (400)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEeCC---cHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcch
Confidence 5688999999999998889999999 99999999986531 3468998888888764332111000
Q ss_pred -----ccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCC-
Q 013079 165 -----ACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLS- 234 (450)
Q Consensus 165 -----~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~- 234 (450)
.....+..++..|++++++++..+++++|++++++||+|.+.+ +++|.++|++||+++|+|++|+++...
T Consensus 149 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G 228 (400)
T PTZ00125 149 YNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG 228 (400)
T ss_pred hccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc
Confidence 0011234556679999999983368999999999999999987 999999999999999999998655321
Q ss_pred ----c--cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHH
Q 013079 235 ----P--ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKE 308 (450)
Q Consensus 235 ----~--~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~ 308 (450)
. .....|+++ ++|.++++++++ |+++.++++++.+..... .....++.+.+.++...+..+.. ....++
T Consensus 229 ~~~~~~~~~~~pd~~~--~sK~l~~g~~~i-g~v~~~~~~~~~~~~~~~-~~t~~~~~~~~~aa~~~l~~i~~-~~~~~~ 303 (400)
T PTZ00125 229 KLLAHDHEGVKPDIVL--LGKALSGGLYPI-SAVLANDDVMLVIKPGEH-GSTYGGNPLACAVAVEALEVLKE-EKLAEN 303 (400)
T ss_pred hhhHHHhcCCCCCEEE--EcccccCCCcCc-EEEEEcHHHHhhccCCCC-CCCCCcCHHHHHHHHHHHHHHHh-cCHHHH
Confidence 1 122357776 679999755588 899999988887754322 11122333333333222222111 012233
Q ss_pred HHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhc
Q 013079 309 HCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQN 374 (450)
Q Consensus 309 ~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~~~l~~ 374 (450)
..++.+.+.+.|++.-.. .+... ...+.|.++++.++. ......+...|..
T Consensus 304 ~~~~~~~l~~~l~~l~~~--~~~~~-------------~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~ 356 (400)
T PTZ00125 304 AQRLGEVFRDGLKELLKK--SPWVK-------------EIRGKGLLNAIVFDHSDGVNAWDLCLKLKE 356 (400)
T ss_pred HHHHHHHHHHHHHHHHhc--CCCeE-------------EEecccEEEEEEEccCcchHHHHHHHHHHH
Confidence 445556666666553000 01000 011457788888863 2345667777654
No 239
>PRK07505 hypothetical protein; Provisional
Probab=99.85 E-value=4.5e-18 Score=171.94 Aligned_cols=192 Identities=15% Similarity=0.146 Sum_probs=133.8
Q ss_pred HHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc----cCCC-EEEEeC
Q 013079 74 ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC----SSGG-HVVAAR 148 (450)
Q Consensus 74 ~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~----~~gd-~Vi~~~ 148 (450)
+++.+.++. +++.......++...+..+++++.|+++++. ..+++++ |++|+..++..+. .+|+ .||+.+
T Consensus 67 ~A~~~~l~~-~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~~~~s---G~~a~~~ai~~~~~~~~~~~~~~vi~~~ 141 (402)
T PRK07505 67 EGAVDALKR-TGSLHLSSSRTRVRSQILKDLEEALSELFGA-SVLTFTS---CSAAHLGILPLLASGHLTGGVPPHMVFD 141 (402)
T ss_pred HHHHHHHHH-hCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CEEEECC---hHHHHHHHHHHHHhcccCCCCCCEEEEc
Confidence 566665543 3421111122234577889999999999988 7777778 8889988886432 2233 366666
Q ss_pred CCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC
Q 013079 149 TLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 149 ~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 228 (450)
..||+.......... .+.++.+++..|++++++++ +++++++++.+|+||+|.+.++++|.++|+++|+++|+||+|
T Consensus 142 ~~~H~s~~~~~~~~~--~~~~v~~~~~~d~~~l~~~~-~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~ 218 (402)
T PRK07505 142 KNAHASLNILKGICA--DETEVETIDHNDLDALEDIC-KTNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAH 218 (402)
T ss_pred hhhhHhHHhhhhhhh--cCCeEEEeCCCCHHHHHHHH-hcCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcc
Confidence 666654322222221 24577888888999999988 667889999999999999999999999999999999999997
Q ss_pred --CCCC-----CC--ccC---CCCeEEEeCCCCccccCccceEEEEE-cCHHHHHHHHHHhh
Q 013079 229 --SPLV-----LS--PAR---LGADVVVHSISKFISGGADIIAGAVC-GPANLVNSMMDLHQ 277 (450)
Q Consensus 229 --~~~~-----~~--~~~---~g~di~~~S~sK~~g~~g~~igG~l~-~~~~~~~~l~~~~~ 277 (450)
+.+. +. ... ...++++.|++|.++++| |+++ .++++++.+.....
T Consensus 219 ~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G----g~~~~~~~~~~~~~~~~~~ 276 (402)
T PRK07505 219 GLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG----GVIMLGDAEQIELILRYAG 276 (402)
T ss_pred cccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC----eEEEeCCHHHHHHHHHhCC
Confidence 2221 11 111 234688899999999764 7765 57788887766443
No 240
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.84 E-value=5.7e-19 Score=175.95 Aligned_cols=307 Identities=18% Similarity=0.204 Sum_probs=201.9
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
.+.++++++++++++|.+.++.|+| ||.|+.+++.++ +++||+|+++..+|.++...+. ..|.+++++|++
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~s---gt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~-----~~G~~pv~~Di~ 95 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSS---GTSALHLALRALGLGPGDEVIVPAYTFPATASAIL-----WAGAEPVFVDID 95 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESS---HHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHH-----HTT-EEEEE-BE
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCC---hhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHH-----HhccEEEEEecc
Confidence 5899999999999999999999999 999999999987 6789999999999999988875 479999999876
Q ss_pred ------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCC-CCCCccCCC--CeEEEeCC
Q 013079 177 ------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSP-LVLSPARLG--ADVVVHSI 247 (450)
Q Consensus 177 ------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~-~~~~~~~~g--~di~~~S~ 247 (450)
|++++++++ +++|++|++.+ ..|...|+++|.++|+++|+++|.|++++. ..++....| .|+.++|+
T Consensus 96 ~~~~~id~~~~~~~i-~~~t~ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf 171 (363)
T PF01041_consen 96 PETLNIDPEALEKAI-TPKTKAILVVH---LFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSF 171 (363)
T ss_dssp TTTSSB-HHHHHHHH-HTTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEES
T ss_pred CCcCCcCHHHHHHHh-ccCccEEEEec---CCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecC
Confidence 899999999 89999998754 578889999999999999999999999832 222222221 48888887
Q ss_pred --CCccccCccceEEEEEc-CHHHHHHHHHHhhhhhh------c-----cC--CCchHHHHHHHHccCCcHHHHHHHHHH
Q 013079 248 --SKFISGGADIIAGAVCG-PANLVNSMMDLHQGALM------L-----LG--PTMNPKVAFELSERIPHLGLRMKEHCH 311 (450)
Q Consensus 248 --sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~------~-----~g--~~~~~~~a~~~~~~~~~l~~~~~~~~~ 311 (450)
+|.+.... ||+++. ++++.++++.++..... . .| ..++...|+.++..++.+++++++.++
T Consensus 172 ~~~K~i~~ge---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~ 248 (363)
T PF01041_consen 172 HPTKIITTGE---GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRE 248 (363)
T ss_dssp STTSSS-SSS----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCCCCcCCC---CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 59986433 688765 56788888776653211 0 11 236667777777788889999998899
Q ss_pred HHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccccccccccccc
Q 013079 312 RALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSLGYYE 389 (450)
Q Consensus 312 ~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~~~~~l~~~~~~g~i~vs~G~~~ 389 (450)
+++.+.+.|...+.....+..+.... .....+.+.+++. .....+++.|...+ +........
T Consensus 249 ~a~~y~~~L~~~~~~~~~~~~~~~~~------------~~~~~f~i~~~~~~~~~rd~l~~~L~~~G----I~~~~~~~~ 312 (363)
T PF01041_consen 249 NAQRYREALAGIPGIKPPPIPDGAER------------SSYYRFPIRLPDEALADRDELVEALRARG----IETRPHYPK 312 (363)
T ss_dssp HHHHHHHHHTTGTTEEEEGCGTTTEE------------BCESSEEEEETCCGCSTHHHHHHHHHHTT----BEEBCSTSS
T ss_pred HHHHHHHHHhcCCCcccccccccccc------------cccccccccccccccchHHHHHHHHHHCC----CcccccccC
Confidence 99999999988765211111111100 1122456666642 12567788877532 343333211
Q ss_pred cccccccccc-----CCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 390 TLMSCSGSST-----SSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 390 s~~~~~~~~~-----~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
.+-..+.... ...++..+.. ....|.+-+. ..-+++.++.+.++++
T Consensus 313 pl~~~~~~~~~~~~~~~~~P~ae~l----~~r~l~LP~~-~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 313 PLHRQPVYRSYPYYAPGDLPNAERL----SQRLLSLPIH-PRLTEEDVDYIAEAIR 363 (363)
T ss_dssp CGGGSGGGTTGEEEETSSSHHHHHH----HHHEEEEEHS-TTSCHHHHHHHHHHHH
T ss_pred chhhhHHHHhcCccccCCCHHHHHH----HhCeEECcCC-CCCCHHHHHHHhhccC
Confidence 1111111110 1122222222 2467888888 6667777888877763
No 241
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.84 E-value=5.5e-19 Score=177.13 Aligned_cols=286 Identities=14% Similarity=0.155 Sum_probs=182.3
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc-cCC-CEEEEeCCCchhHHHHHHHhCCC---c-----c
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC-SSG-GHVVAARTLYGGTHALLTHFFPR---A-----C 166 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~-~~g-d~Vi~~~~~y~~~~~~~~~~~~~---~-----~ 166 (450)
.++...++.+.+++..+.+.++|++| |++|+..+++... .+| ++|++.++.|++........... . .
T Consensus 69 ~~~~~~~la~~l~~~~~~~~~~~~~s---G~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~ 145 (377)
T PRK02936 69 TNSLQEEVASLLAENSAGDLVFFCNS---GAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPL 145 (377)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCC---cHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCC
Confidence 35677788888888776678999999 9999999998532 234 67999999888654322111000 0 0
Q ss_pred CeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc-------
Q 013079 167 NITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP------- 235 (450)
Q Consensus 167 g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~------- 235 (450)
...+.+++.+|++++++.+ .+++++|+++++++++|.+.+ +++|.++|++||+++|+||+|.++....
T Consensus 146 ~~~~~~~~~~d~~~l~~~~-~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~ 224 (377)
T PRK02936 146 LPGFTHVPFNDIKALKEVM-NEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQ 224 (377)
T ss_pred CCCceEeCCCCHHHHHHhc-cCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHh
Confidence 1134456667999999999 788999999999999887743 9999999999999999999996554321
Q ss_pred cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHH
Q 013079 236 ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALI 315 (450)
Q Consensus 236 ~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~ 315 (450)
.....|++ +++|.++ +|+++ |++++++++.+.+..... ..+..++.+.+.++..++..+. ....+++..++.++
T Consensus 225 ~~~~~di~--t~sK~l~-~G~~i-g~v~~~~~~~~~~~~~~~-~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~ 298 (377)
T PRK02936 225 FGLDPDIV--TVAKGLG-NGIPV-GAMIGKKELGTAFGPGSH-GSTFGGNPLAMAAAKEVLQVIK-QPSFLEEVQEKGEY 298 (377)
T ss_pred hCCCCcEE--EEccccc-CCCcc-EEEEEcHHHHhhccCCCC-CCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHH
Confidence 11234654 5999999 78998 899999888877643222 1122334444444444443321 12344556677777
Q ss_pred HHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccccccccccc
Q 013079 316 FARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCS 395 (450)
Q Consensus 316 l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~ 395 (450)
+.+.|++.... .|... ...+.|.+++++++.. ...+.+.+.. .| +.+..+
T Consensus 299 l~~~L~~~~~~--~~~~~-------------~v~~~g~~~~i~~~~~--~~~~~~~l~~---~g-v~v~~~--------- 348 (377)
T PRK02936 299 FLQKLQEELEH--LECVK-------------NIRGKGLMIGIECTEE--VAPVIEQLRE---EG-LLVLSA--------- 348 (377)
T ss_pred HHHHHHHHHhh--CCcEE-------------eEeecceEEEEEecch--HHHHHHHHHH---CC-eEEecC---------
Confidence 77777653100 01100 0013567899999753 4566666654 22 221110
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 396 GSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 396 ~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
..+.|||++. ...+++.++.+.+.|.+
T Consensus 349 ------------------g~~~lRi~p~-~~~~~~~i~~~i~~l~~ 375 (377)
T PRK02936 349 ------------------GPNVIRLLPP-LVVTKEELDQAVYLLKK 375 (377)
T ss_pred ------------------CCCEEEEECC-cccCHHHHHHHHHHHHH
Confidence 1368999986 44555556666555543
No 242
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.84 E-value=7.6e-19 Score=177.58 Aligned_cols=292 Identities=17% Similarity=0.173 Sum_probs=187.7
Q ss_pred CCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc--------cCCCEEEEeCCCchhHHHHHHHhCCCc--
Q 013079 96 HFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC--------SSGGHVVAARTLYGGTHALLTHFFPRA-- 165 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~--------~~gd~Vi~~~~~y~~~~~~~~~~~~~~-- 165 (450)
+.++...+++++|+++.+.+.++|++| |++|+..+++... ..+.+|+..+..||+............
T Consensus 78 ~~~~~~~~la~~l~~~~~~~~v~~~~s---GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~ 154 (406)
T PRK12381 78 YTNEPVLRLAKKLIDATFADRVFFCNS---GAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKY 154 (406)
T ss_pred cCCHHHHHHHHHHHhhCCCCeEEEcCC---cHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCccc
Confidence 346777899999999988889999999 9999999998642 134679999999988754321111000
Q ss_pred ------cCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccc-----cCHHHHHHHHHhcCCEEEEeCCCCCCCCC
Q 013079 166 ------CNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAV-----ANIPELSRLAHDKGVTVVVDNTFSPLVLS 234 (450)
Q Consensus 166 ------~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v-----~~l~~I~~la~~~gi~livD~~~~~~~~~ 234 (450)
.-..+..++..|++++++.+ .+++++|+++ |.|++|.+ ..+++|.++|++||+++|+||+|.++...
T Consensus 155 ~~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~ 232 (406)
T PRK12381 155 SQDFAPLPPDIRHAAYNDLNSASALI-DDQTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRT 232 (406)
T ss_pred ccCCCCCCCCeeEeCCCCHHHHHHhc-cCCeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCC
Confidence 00123455667999999999 7789999997 56777654 24889999999999999999998555321
Q ss_pred c-------cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHH
Q 013079 235 P-------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMK 307 (450)
Q Consensus 235 ~-------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~ 307 (450)
. ..+..|+ .|++|.++ +|+++ |++++++++++.+..... ..+..++.+.+.++...+..++ .....+
T Consensus 233 G~~~~~~~~~v~pDi--~t~sK~l~-gG~~i-g~~~~~~~~~~~~~~~~~-~~t~~~~pl~~aaa~a~l~~l~-~~~~~~ 306 (406)
T PRK12381 233 GELYAYMHYGVTPDV--LTTAKALG-GGFPI-GAMLTTEKCASVMTVGTH-GTTYGGNPLASAVAGKVLELIN-TPEMLN 306 (406)
T ss_pred cchhhhHhhCCCCCE--EEehhhhh-CCCce-EEEEEcHHHHhhcCCCCC-CCCCCCCHHHHHHHHHHHHHHh-hccHHH
Confidence 1 1223565 47999999 57998 999899888887754222 1123334444444444333222 123456
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccccccccc
Q 013079 308 EHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSL 385 (450)
Q Consensus 308 ~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~~~~~l~~~~~~g~i~vs~ 385 (450)
+..++.+++.+.|++++.+. +... +.+|.|.+++++++.. ..+..+...+.. .| +.+..
T Consensus 307 ~~~~~~~~l~~~L~~l~~~~--~~~~-------------~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~---~G-v~v~~ 367 (406)
T PRK12381 307 GVKQRHDWFVERLNTINARY--GLFS-------------EIRGLGLLIGCVLNAEYAGKAKQISQEAAK---AG-VMVLI 367 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhC--CCEE-------------EEecCeEEEEEEecCchhhHHHHHHHHHHH---CC-cEEee
Confidence 66778888888887753211 1000 1125788999998742 235666666664 23 22210
Q ss_pred ccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC----CCHHHHHHHHHHHHHHhhhc
Q 013079 386 GYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL----GTLDQRWSQFEKALSRMQDS 445 (450)
Q Consensus 386 G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~----~~~~~~i~~l~~al~~~~~~ 445 (450)
. .++.|||++. . +++++.++.|.+++.++...
T Consensus 368 ~---------------------------g~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~~~~ 403 (406)
T PRK12381 368 A---------------------------GPNVVRFAPA-LNISEEEITTGLDRFARACERFVSR 403 (406)
T ss_pred C---------------------------CCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 0 1357999988 5 33444555666666655443
No 243
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.83 E-value=9.8e-20 Score=176.18 Aligned_cols=159 Identities=17% Similarity=0.216 Sum_probs=128.7
Q ss_pred CCChhHHHHHHHHHHHhCCCeEEE-ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 96 HFNPTVLNLSRQMAALEGTEAAYC-TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~~~~~~-tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
......+++++.+|+++|++.+++ |+| +++++.+++.+++++||+|++++++|.++...+. ..|.++.+++
T Consensus 56 ~~~g~i~~~~~~~A~~~ga~~~~~~~~G---st~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~-----~~g~~~~~v~ 127 (294)
T cd00615 56 DPTGPIKEAQELAARAFGAKHTFFLVNG---TSSSNKAVILAVCGPGDKILIDRNCHKSVINGLV-----LSGAVPVYLK 127 (294)
T ss_pred CCChHHHHHHHHHHHHhCCCCEEEEcCc---HHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHH-----HCCCEEEEec
Confidence 345568999999999999988765 899 9999999999999999999999999999887775 3577777764
Q ss_pred C-----------CCHHHHHHhhhc-CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCC-CCCC------Cc
Q 013079 175 I-----------SDHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFS-PLVL------SP 235 (450)
Q Consensus 175 ~-----------~d~~~l~~ai~~-~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~-~~~~------~~ 235 (450)
. .|++++++++.. +++++|++++| |++|.+.|+++|+++|+++|+++|+|++|+ .+.+ +.
T Consensus 128 ~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~ 206 (294)
T cd00615 128 PERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSA 206 (294)
T ss_pred CccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcch
Confidence 3 278999999832 47899999988 789999999999999999999999999983 3322 22
Q ss_pred cCCCCeEEEeCCCCccccCccceEEEEEcC
Q 013079 236 ARLGADVVVHSISKFISGGADIIAGAVCGP 265 (450)
Q Consensus 236 ~~~g~di~~~S~sK~~g~~g~~igG~l~~~ 265 (450)
...++|+++.|+||++++. +.||++..+
T Consensus 207 ~~~~~div~~S~hK~l~g~--~~~~~l~~~ 234 (294)
T cd00615 207 AMAGADIVVQSTHKTLPAL--TQGSMIHVK 234 (294)
T ss_pred hhcCCcEEEEchhcccchH--hHHHHHHhC
Confidence 3348999999999998643 334555443
No 244
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.83 E-value=1e-18 Score=165.01 Aligned_cols=259 Identities=22% Similarity=0.290 Sum_probs=173.3
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEE-eCCCchhHHHHHH------HhCCCccCee
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVA-ARTLYGGTHALLT------HFFPRACNIT 169 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~-~~~~y~~~~~~~~------~~~~~~~g~~ 169 (450)
.+.-++.+++..|+.+|+|.+++-+.+.|||+|+.++|.++++|||+++. +..-|......+- ..+.. +|+.
T Consensus 52 ~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e-~Gi~ 130 (403)
T PF06838_consen 52 DDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKE-FGIK 130 (403)
T ss_dssp T-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGG-GT-E
T ss_pred CCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHH-hCce
Confidence 36688999999999999999999888888999999999999999999885 5566887777662 11223 5888
Q ss_pred EEEeCCC-----CHHHHHHhhhcCCceEEEEe----cCCCCcccccCHHHHHHHHHhc--CCEEEEeCCCCCCC--CCcc
Q 013079 170 TTFVDIS-----DHEMVNSAIVQGRTKVLYFE----SISNPTLAVANIPELSRLAHDK--GVTVVVDNTFSPLV--LSPA 236 (450)
Q Consensus 170 v~~v~~~-----d~~~l~~ai~~~~t~lv~i~----~~~NptG~v~~l~~I~~la~~~--gi~livD~~~~~~~--~~~~ 236 (450)
...++.. |++.+++++ +++||+|+|. ....|.-++.+|+++.+++|+. +++++||++|++|. ..|.
T Consensus 131 Y~~v~L~~dg~~D~~~i~~~~-~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~ 209 (403)
T PF06838_consen 131 YREVPLTEDGTIDWEAIKKAL-KPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPT 209 (403)
T ss_dssp EEE--B-TTSSB-HHHHHHHH-HTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GG
T ss_pred eEEEeecCCCCcCHHHHHHhh-ccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCcc
Confidence 8888754 899999999 7899999997 3455677777888888888874 89999999999886 4688
Q ss_pred CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh--hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHH
Q 013079 237 RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRAL 314 (450)
Q Consensus 237 ~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~ 314 (450)
+.|+|++.+|+-|..|+.-.+.|||+++++++++....... +.....|.++... ....+++-.-+....+..+-+.
T Consensus 210 ~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~~--R~~~QGlFlAP~vV~eAlKgai 287 (403)
T PF06838_consen 210 EVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGTN--RLMFQGLFLAPHVVGEALKGAI 287 (403)
T ss_dssp GGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTTH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcchH--HHHHhHHhhchHHHHHHHHHHH
Confidence 88999999999999998766789999999999988754422 2223344444322 1122233223444455566666
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 315 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 315 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
..+..++++|+++. |.. +.+.. --+-++.|.+.+....|++.++.
T Consensus 288 f~A~~fe~lG~~v~-P~~-~~~R~-------------DiIQai~l~~~e~l~~FC~~iQ~ 332 (403)
T PF06838_consen 288 FAAALFEKLGFEVS-PKP-DDPRS-------------DIIQAIELGSPEKLIAFCQGIQA 332 (403)
T ss_dssp HHHHHHHHTT-EEE-S-T-TS--S-------------SS-EEEE-SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcCC-CCC-CCCCC-------------ceEEEEECCCHHHHHHHHHHHHh
Confidence 77777888999875 332 11221 12788999999999999999884
No 245
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.83 E-value=1.6e-18 Score=178.45 Aligned_cols=165 Identities=19% Similarity=0.205 Sum_probs=125.4
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEe-cChHHHHHHHHHH---HH-HhccCCC----EEEEeCCCchhHHHHHHHhCCCccCe
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCT-ASDKAGMSAISSV---LM-QLCSSGG----HVVAARTLYGGTHALLTHFFPRACNI 168 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~t-sg~~~gt~ai~~a---l~-~l~~~gd----~Vi~~~~~y~~~~~~~~~~~~~~~g~ 168 (450)
.+.+.++++.+++++|.+.+.++ ++ |+.+...+ ++ .+..+|| +|+++.+.|+.+...+. ..|+
T Consensus 112 lel~~~~~~~la~l~G~~~~~l~~~~---GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~-----~~G~ 183 (481)
T PRK04366 112 LELMYELQEWLKEITGMDAVTLQPAA---GAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAA-----MAGF 183 (481)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEeCc---HHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHH-----HcCC
Confidence 35678899999999998765444 44 54443332 22 2345665 99999999999988764 3688
Q ss_pred eEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccc-cCHHHHHHHHHhcCCEEEEeCCC-CC-C-CCCccCCC
Q 013079 169 TTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAV-ANIPELSRLAHDKGVTVVVDNTF-SP-L-VLSPARLG 239 (450)
Q Consensus 169 ~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v-~~l~~I~~la~~~gi~livD~~~-~~-~-~~~~~~~g 239 (450)
+++.++.+ |+++|++++ +++|++|++++|| +||.+ .|+++|+++|+++|+++|+|+++ .. + ..++.++|
T Consensus 184 ~vv~v~~~~~~~~D~e~L~~~i-~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~G 261 (481)
T PRK04366 184 KVVEIPSNEDGLVDLEALKAAV-GEDTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMG 261 (481)
T ss_pred EEEEeecCCCCCcCHHHHHhhc-ccCCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccC
Confidence 88887653 889999999 8899999999987 99987 58999999999999999999997 22 2 24677889
Q ss_pred CeEEEeCCCCccccC---ccceEEEEEcCHHHHHHH
Q 013079 240 ADVVVHSISKFISGG---ADIIAGAVCGPANLVNSM 272 (450)
Q Consensus 240 ~di~~~S~sK~~g~~---g~~igG~l~~~~~~~~~l 272 (450)
+|++++|.||++++| |.+-+|+++.++++...+
T Consensus 262 aD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~l 297 (481)
T PRK04366 262 FDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFL 297 (481)
T ss_pred CCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhC
Confidence 999999999998744 222237887777666544
No 246
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.83 E-value=6.8e-18 Score=171.33 Aligned_cols=211 Identities=16% Similarity=0.159 Sum_probs=159.9
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh---------ccCCCEEEEeCCCchhHHHHHHHhCCCccCe
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL---------CSSGGHVVAARTLYGGTHALLTHFFPRACNI 168 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l---------~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~ 168 (450)
.+...++++.+|+++|.+.+++|+| |++|+.+++.++ +++||+||++.++|.++...+. ..|.
T Consensus 62 G~~~~~fe~~lA~~~g~~~~v~~~s---Gt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~-----~~G~ 133 (438)
T PRK15407 62 GRFNDAFEKKLAEFLGVRYALLVNS---GSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPII-----QNGL 133 (438)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEECC---HHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHH-----HcCC
Confidence 3568899999999999999999999 999999999876 3789999999999999987775 3677
Q ss_pred eEEEeCCC------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCc---cCC
Q 013079 169 TTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSP---ARL 238 (450)
Q Consensus 169 ~v~~v~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~---~~~ 238 (450)
++.+++.+ |++++++++ +++|++|++++ +.|...++++|.++|+++|+++|+|++| .+..++. -.+
T Consensus 134 ~pv~vdvd~~~~~id~~~le~~i-~~~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~ 209 (438)
T PRK15407 134 VPVFVDVELPTYNIDASLLEAAV-SPKTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTF 209 (438)
T ss_pred EEEEEecCCCcCCcCHHHHHHHc-CcCCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeecc
Confidence 88887653 789999999 88999999876 4677889999999999999999999998 2222222 223
Q ss_pred CCeEEEeCCC--CccccCccceEEEEEc-CHHHHHHHHHHhhhhhh---------------------------------c
Q 013079 239 GADVVVHSIS--KFISGGADIIAGAVCG-PANLVNSMMDLHQGALM---------------------------------L 282 (450)
Q Consensus 239 g~di~~~S~s--K~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~---------------------------------~ 282 (450)
| |+.++|++ |.+.. |. ||+++. ++++.+.++..+..... .
T Consensus 210 g-d~~~fSf~~~k~~~~-ge--GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (438)
T PRK15407 210 G-DIATLSFYPAHHITM-GE--GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSH 285 (438)
T ss_pred C-ceEEEeCCCCCCccc-cC--ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccc
Confidence 3 88888875 55553 32 588765 45666655544331100 0
Q ss_pred cC--CCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCC
Q 013079 283 LG--PTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 283 ~g--~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
.| ..++...|++.+..++.++++.++.+++++++.+.|...+
T Consensus 286 ~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~ 329 (438)
T PRK15407 286 LGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLE 329 (438)
T ss_pred cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 12 2355666777777888888888888888999999997764
No 247
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.83 E-value=7.6e-19 Score=174.43 Aligned_cols=313 Identities=11% Similarity=0.044 Sum_probs=191.8
Q ss_pred CccccCC-HHHHHHhhcCCCCCCC-CCccccCCCC---hhHHHHHHHHHHHhCC---CeEEEe-cChHHHHHHHHHHHHH
Q 013079 66 ATFTVME-PETMRRMFAGELGPDR-DFFIYSRHFN---PTVLNLSRQMAALEGT---EAAYCT-ASDKAGMSAISSVLMQ 136 (450)
Q Consensus 66 tt~~~~~-~~~~~~~~~~~~~n~~-~~~~y~r~~~---~~~~~l~~~iA~l~g~---~~~~~t-sg~~~gt~ai~~al~~ 136 (450)
.+...++ .++|.+.+.. ++|+. +.|..+.... ..+++.|+.+++++++ +.++|| +| ||+|+++++.+
T Consensus 7 p~~~p~~V~~a~~~~~~~-~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs---~T~a~~~~~~~ 82 (355)
T cd00611 7 PAALPEEVLEQAQKELLD-FNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGG---ATGQFAAVPLN 82 (355)
T ss_pred CCCCCHHHHHHHHHHHhh-cccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCC---chHHHHHHHHh
Confidence 3444444 3777776644 33443 3455553333 6689999999999996 247777 55 99999999999
Q ss_pred hcc---CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC------C-HHHHHHhhhcCCceEEEEecCCCCccccc
Q 013079 137 LCS---SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS------D-HEMVNSAIVQGRTKVLYFESISNPTLAVA 206 (450)
Q Consensus 137 l~~---~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~------d-~~~l~~ai~~~~t~lv~i~~~~NptG~v~ 206 (450)
++. +|++|++....+.. . ....+ .|+++++++.+ + ++..+..+ ++++++|.+.+..|.||.+.
T Consensus 83 l~~~~~~~~~i~~g~~~~~~-~----~~a~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~lV~~~h~~t~tG~~~ 155 (355)
T cd00611 83 LLGDKGTADYVVTGAWSAKA-A----KEAKR-YGGVVVIVAAKEEGKYTKIPDVETWDL-APDAAYVHYCSNETIHGVEF 155 (355)
T ss_pred cCCCCCeEEEEECCHHHHHH-H----HHHHh-cCCCcEEEecccccCCCCCCCHhhcCC-CCCCCEEEEeCCcccccEEc
Confidence 976 45566553222221 1 22233 57777777643 2 22333445 67899999999999999983
Q ss_pred CHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhh------
Q 013079 207 NIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG------ 278 (450)
Q Consensus 207 ~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~------ 278 (450)
+ ++++.+|++++||.++ +...++..+++ +++.|.+|++|++| + |+++.++++++++......
T Consensus 156 ~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~lGP~G--~-g~l~~~~~~~~~~~~~~~~~~~~~~ 225 (355)
T cd00611 156 D-----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNLGPAG--V-TVVIVRKDLLGKARKITPSMLNYKT 225 (355)
T ss_pred c-----eecccCCCeEEEEccccccCCCCCHHHhC--EEEeecccccCCCc--e-EEEEECHHHHhhcccCCCCcccHHH
Confidence 3 4455699999999998 66667766655 45567999999988 5 8888888777654321100
Q ss_pred --hhhccCCCchHHHHHHHHccC-----C-cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCC
Q 013079 279 --ALMLLGPTMNPKVAFELSERI-----P-HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYG 350 (450)
Q Consensus 279 --~~~~~g~~~~~~~a~~~~~~~-----~-~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g 350 (450)
......++++....+.+...+ . .++.+.++++++++++.+.|++++. +..+.. .+.. .
T Consensus 226 ~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g-l~~~~~--~~~~-----------r 291 (355)
T cd00611 226 HADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG-FYRGPV--DKRA-----------R 291 (355)
T ss_pred HHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc-ccccCC--CHHH-----------c
Confidence 000112233322222222222 2 3556667788999999999998732 211110 1110 1
Q ss_pred cCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHH
Q 013079 351 FGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQ 430 (450)
Q Consensus 351 ~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~ 430 (450)
.+.+++|.+++......+++.+.. .|. .+..| . + ..+.||+|++ ..++.+
T Consensus 292 s~~vvsf~~~~~~l~~~~~~~~~r---~G~-~~~~~----------~--------------~-~~g~vR~S~~-~~nt~e 341 (355)
T cd00611 292 SRMNVPFRLGKEELEKEFLKEAEA---AGM-IGLKG----------H--------------R-SVGGIRASIY-NALSLE 341 (355)
T ss_pred CceEEEEEcCChhhhHHHHHHHHH---CCC-cccCC----------C--------------c-ccCeEEEEcc-CCCCHH
Confidence 234699998864111333333322 221 12211 0 0 1368999999 999999
Q ss_pred HHHHHHHHHHHhh
Q 013079 431 RWSQFEKALSRMQ 443 (450)
Q Consensus 431 ~i~~l~~al~~~~ 443 (450)
+++.|.++|++++
T Consensus 342 di~~l~~al~~~~ 354 (355)
T cd00611 342 GVQALADFMKEFQ 354 (355)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 248
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=2.2e-18 Score=154.46 Aligned_cols=287 Identities=13% Similarity=0.144 Sum_probs=190.9
Q ss_pred ChhHHHHHHHHHHHh--CCCeEEEecChHHHHHHHHHHHHHhccCC-CEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 98 NPTVLNLSRQMAALE--GTEAAYCTASDKAGMSAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~--g~~~~~~tsg~~~gt~ai~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
++.-.+++..++.-- -++.+++..| .-|.|.+++++.|.|| ++|+...|+|..+...+. ..+++|+.++
T Consensus 68 d~rnk~ls~a~~~dkpLt~dnic~GvG---sDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~-----iNd~eVvkvp 139 (375)
T KOG0633|consen 68 DPRNKRLSDALAQDKPLTSDNICVGVG---SDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAA-----INDAEVVKVP 139 (375)
T ss_pred CcccchhhhhcccCCCCCccceEEecC---cHHHHHHHHhheecCCccceeecCCcceeEEEEee-----cCCceEEEec
Confidence 344444555554432 2467888888 8999999999999999 789999999987643332 4678888877
Q ss_pred CC-----CHHHHHHhhhcC-CceEEEEecCCCCcccccCHHHHHHHHHhc-CCEEEEeCCCCCCCC--Cc----cCCCCe
Q 013079 175 IS-----DHEMVNSAIVQG-RTKVLYFESISNPTLAVANIPELSRLAHDK-GVTVVVDNTFSPLVL--SP----ARLGAD 241 (450)
Q Consensus 175 ~~-----d~~~l~~ai~~~-~t~lv~i~~~~NptG~v~~l~~I~~la~~~-gi~livD~~~~~~~~--~~----~~~g~d 241 (450)
.. |.|++.+.+..+ ..|++++++|+||||.+...+.|.++.+.. |.++++||+|-.|.. +- .++..-
T Consensus 140 l~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNL 219 (375)
T KOG0633|consen 140 LNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNL 219 (375)
T ss_pred CCCCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCce
Confidence 54 788888877433 789999999999999998888888887653 789999999844422 21 233678
Q ss_pred EEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE--RIPHLGLRMKEHCHRALIFARR 319 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~ 319 (450)
+++.++||.+|..|.|+ |+-..+..+++-+......+ .-+.+....|..++. ..+.++.......+.+.+|...
T Consensus 220 ivlqTlSKsfGLAGiRv-G~~~~~~~ia~iln~~KaPY---NiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~ke 295 (375)
T KOG0633|consen 220 IVLQTLSKSFGLAGIRV-GYGAFPLSIAEILNRAKAPY---NISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKE 295 (375)
T ss_pred eehhhhhhhcCcceeEe-ecccccHHHHHHHHhccCCc---cccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 99999988888777665522 223333344444443 4455666666677788889999
Q ss_pred HHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH--HHHHHHHHHhhcccccccccccccccccccccccc
Q 013079 320 MKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGS 397 (450)
Q Consensus 320 L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~ 397 (450)
|.+.++--.+|+- ...+++-+++.+. ..+..++.++.. ..|+ -|..-+. .+.|
T Consensus 296 Lt~v~~~~~~~gg-----------------~daNFiLi~v~~~~n~~akkly~q~at--~~gV-vVRfrgs-----e~~c 350 (375)
T KOG0633|consen 296 LTEVPFLNDYPGG-----------------SDANFILIEVTGGDNGMAKKLYKQDAT--KMGV-VVRFRGS-----EEGC 350 (375)
T ss_pred hhcCccccCCCCc-----------------ccccEEEEEEcCCCcHHHHHHHHHHHH--hcce-EEEEcCC-----cccc
Confidence 9887652123430 1345777777622 123334333322 1221 2221111 1112
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 013079 398 STSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKA 438 (450)
Q Consensus 398 ~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~a 438 (450)
.|++||++|..|+..-+++.|++.
T Consensus 351 -----------------~G~lRitvGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 351 -----------------KGYLRITVGTPEENTVLMKCLKQF 374 (375)
T ss_pred -----------------ceeEEEEcCCcccchHHHHHHHhh
Confidence 489999999556666666666543
No 249
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.82 E-value=8.6e-18 Score=160.94 Aligned_cols=277 Identities=17% Similarity=0.207 Sum_probs=189.5
Q ss_pred eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC----CHHHHHHhhhc----
Q 013079 116 AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS----DHEMVNSAIVQ---- 187 (450)
Q Consensus 116 ~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~----d~~~l~~ai~~---- 187 (450)
.+++|+| .|.++..+++.++..||+|++...+|.+....++ ..|+.+..|+.+ ++|.|++.+.+
T Consensus 126 diiit~G---~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~-----a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~ 197 (472)
T KOG0634|consen 126 DIIITNG---NTDGLFKVLRTLINRGDHVLIEEYTYPSALQSME-----ALGVKIIPVKMDQDGIDPESLEEILSNWKPG 197 (472)
T ss_pred eEEEecC---CchHHHHHHHHhhcCCCceEEecccchHHHHhcc-----ccCceEEeccccCCCCCHHHHHHHHhcCCcc
Confidence 4799999 9999999999999999999999999999887765 368787777765 78888887632
Q ss_pred ----CCceEEE-EecCCCCcccccC---HHHHHHHHHhcCCEEEEeCCCCCCCCC-------------------------
Q 013079 188 ----GRTKVLY-FESISNPTLAVAN---IPELSRLAHDKGVTVVVDNTFSPLVLS------------------------- 234 (450)
Q Consensus 188 ----~~t~lv~-i~~~~NptG~v~~---l~~I~~la~~~gi~livD~~~~~~~~~------------------------- 234 (450)
++.+++| |.+-+||||.... .++|.++|++|++++|+|+.|.-+.+.
T Consensus 198 ~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~s 277 (472)
T KOG0634|consen 198 SYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPS 277 (472)
T ss_pred cccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCC
Confidence 2355555 5678999999876 459999999999999999997322111
Q ss_pred ccCC---CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHcc------CCcHHHH
Q 013079 235 PARL---GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSER------IPHLGLR 305 (450)
Q Consensus 235 ~~~~---g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~------~~~l~~~ 305 (450)
++.+ |.++-..||||.++ ||.|+ ||+.+++.+++++..... ..+...+..++......+.. ++++...
T Consensus 278 flslDtdGrVIr~dSFSKiia-PGlRl-G~it~~~~~l~ril~~ae-~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l 354 (472)
T KOG0634|consen 278 FLSLDTDGRVIRNDSFSKIIA-PGLRL-GWITGNSLFLKRILDLAE-VATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHL 354 (472)
T ss_pred cccccccccEEeccchhhhhc-Cccee-EEeecCHHHHHHHhhhcc-eeecCcccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 67899999999999 89999 999999988888765543 22233444555555544432 2445555
Q ss_pred HHHHHHHHHHHHHHHHhC-CC---eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--------CHHHHHHHHHHhh
Q 013079 306 MKEHCHRALIFARRMKKL-GL---KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--------TEEKANRLMNYLQ 373 (450)
Q Consensus 306 ~~~~~~~~~~l~~~L~~~-~~---~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--------~~~~~~~~~~~l~ 373 (450)
...|..++..+...|.+. +. ++..|. .|.++||+++ +..+.+.++....
T Consensus 355 ~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~-------------------aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~ 415 (472)
T KOG0634|consen 355 RSSYTERRNALLSALDKYLPKSVCEYHPPK-------------------AGMFIWVEIPYINFDTKKSINQIEEIIFIKA 415 (472)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeeEEecCC-------------------cceEEEEEecccccccccchHHHHHHHHHHH
Confidence 556788888888888774 43 333332 7889999995 4444555544433
Q ss_pred ccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 374 NYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 374 ~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
. .+| +-+-.|+..... |... -+.-++|+|+. ..+.+++.+.+++--..+
T Consensus 416 v--k~g-V~~v~G~~F~v~--p~~s--------------~~kiffRls~a-~a~~e~l~~g~~rf~~~i 464 (472)
T KOG0634|consen 416 V--KNG-VKLVCGSWFMVD--PESS--------------WSKIFFRLSIA-FAEPEKLDEGIERFGSVI 464 (472)
T ss_pred H--HCC-eEEecCceeEEc--CccC--------------CCcceEEEEee-cCCHHHHHHHHHHHHHHH
Confidence 2 234 333445433221 1111 01248999999 877776665555443333
No 250
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=2.2e-17 Score=160.87 Aligned_cols=226 Identities=18% Similarity=0.216 Sum_probs=167.7
Q ss_pred CCChhHHHHHHHHHHHhCCC--e-EEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 96 HFNPTVLNLSRQMAALEGTE--A-AYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~~--~-~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
.......++.+.+..+++.+ . .++++| ||.|+.+++.++++|||+|++......+.. +.+...+ +|.+++.
T Consensus 35 ~F~~~~~~~~~~L~~v~~t~~~~~~ll~gs---Gt~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~-~g~~v~~ 108 (383)
T COG0075 35 DFVGIMKEVLEKLRKVFGTENGDVVLLSGS---GTLAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAER-YGAEVVV 108 (383)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEcCC---cHHHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHH-hCCceEE
Confidence 34556788888888888876 3 466778 999999999999999999998887766543 2244444 7777777
Q ss_pred eCCC-----CHHHHHHhhh-cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEE
Q 013079 173 VDIS-----DHEMVNSAIV-QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVV 244 (450)
Q Consensus 173 v~~~-----d~~~l~~ai~-~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~ 244 (450)
++.. |++++++++. .++.++|.+.+.-.+||...|+++|+++|++||.++|||.+- +...+++.++|+|+++
T Consensus 109 ~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~i 188 (383)
T COG0075 109 LEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAI 188 (383)
T ss_pred EeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEE
Confidence 7654 9999999994 256789999888889999999999999999999999999984 6777888899999999
Q ss_pred eCCCCccccCccceEEEEEcCHHHHHHHHHH------------hh-----hhhhccCCCchHHHHHHHHccC--CcHHHH
Q 013079 245 HSISKFISGGADIIAGAVCGPANLVNSMMDL------------HQ-----GALMLLGPTMNPKVAFELSERI--PHLGLR 305 (450)
Q Consensus 245 ~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~------------~~-----~~~~~~g~~~~~~~a~~~~~~~--~~l~~~ 305 (450)
.+..|+++.|.. + |++..+++.++.+... .. +....+.++....+...+++.+ +-++.+
T Consensus 189 tgSQK~l~~PPG-l-a~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r 266 (383)
T COG0075 189 TGSQKALGAPPG-L-AFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEAR 266 (383)
T ss_pred ecCchhccCCCc-c-ceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999996543 4 7787777665554321 11 1111122222222222222222 337889
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeC
Q 013079 306 MKEHCHRALIFARRMKKLGLKVLY 329 (450)
Q Consensus 306 ~~~~~~~~~~l~~~L~~~~~~v~~ 329 (450)
.++|+++++.+++.++++|+++..
T Consensus 267 ~~RH~~~~~a~r~~~~alGl~~~~ 290 (383)
T COG0075 267 IARHRRLAEALRAGLEALGLELFA 290 (383)
T ss_pred HHHHHHHHHHHHHHHHHcCCcccc
Confidence 999999999999999999986543
No 251
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.82 E-value=6.8e-18 Score=170.60 Aligned_cols=289 Identities=15% Similarity=0.178 Sum_probs=189.4
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc---------cC-CCEEEEeCCCchhH-HHHHHHhCC--
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC---------SS-GGHVVAARTLYGGT-HALLTHFFP-- 163 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~---------~~-gd~Vi~~~~~y~~~-~~~~~~~~~-- 163 (450)
..+...++++.|+++++.+.++|++| |++|+..+++.+. .+ .++|++....|++. ...+.....
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~~S---Gs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~ 153 (401)
T TIGR01885 77 YNDVFGEFAEYVTKLFGYDKVLPMNT---GAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPD 153 (401)
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeCc---cHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcc
Confidence 45778999999999999889999999 9999999998742 12 35778888888763 333321000
Q ss_pred --CccC---eeEEEeCCCCHHHHHHhhhc--CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCC
Q 013079 164 --RACN---ITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLV 232 (450)
Q Consensus 164 --~~~g---~~v~~v~~~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~ 232 (450)
...+ ..+..++..|+++|++++++ +++.+|++|++++++|.+.| +++|.++|++||+++|+||+|.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g 233 (401)
T TIGR01885 154 SRTNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLG 233 (401)
T ss_pred cccccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 0011 13455566789999988832 46789999999999999987 9999999999999999999985443
Q ss_pred CC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHH
Q 013079 233 LS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLR 305 (450)
Q Consensus 233 ~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~ 305 (450)
.. ......|+++ ++|.++++++++ |+++.++++++.+..... ..+..++.+.+.++..++..++. ...
T Consensus 234 ~~G~~~~~~~~~~~~di~~--~gK~l~~g~~~i-g~v~~~~~i~~~~~~~~~-~~t~~~~p~~~~aa~a~L~~i~~-~~l 308 (401)
T TIGR01885 234 RTGKLLCVDHENVKPDIVL--LGKALSGGVYPV-SAVLADDDVMLTIKPGEH-GSTYGGNPLACAVAVAALEVLEE-EKL 308 (401)
T ss_pred ccchhhHHhhcCCCCCEEE--eeccccCCCCCc-EEEEEcHHHHhhccCCCC-CCCCCCCHHHHHHHHHHHHHHHh-ccH
Confidence 11 1223567776 669999877888 888888888877653222 11233444443344333332221 122
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH---HHHHHHHHHhhccccccccc
Q 013079 306 MKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE---EKANRLMNYLQNYAQFGFMA 382 (450)
Q Consensus 306 ~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~---~~~~~~~~~l~~~~~~g~i~ 382 (450)
.++..++.+++.+.|++++..+.. ...|.|.++.+.++.. ..+..+...|.. .| +.
T Consensus 309 ~~~~~~~~~~~~~~L~~l~~~~~~-----------------~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~---~G-v~ 367 (401)
T TIGR01885 309 AENAEKLGEIFRDQLKKLPKPIIT-----------------EVRGRGLLNAIVIDESKTGRTAWDLCLKLKE---KG-LL 367 (401)
T ss_pred HHHHHHHHHHHHHHHHhccCCcee-----------------EEeecCeeEEEEeccCcchhHHHHHHHHHHh---CC-EE
Confidence 345566678888888876432110 0114677888888632 246677777764 23 22
Q ss_pred cccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 383 VSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 383 vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
++. ..++.|||+.. ...+++.++.+.++|++.
T Consensus 368 v~~---------------------------~~~~~lRi~p~-l~~t~~~i~~~l~~l~~~ 399 (401)
T TIGR01885 368 AKP---------------------------THGNIIRLAPP-LVITEEQLDEGLEIIKKV 399 (401)
T ss_pred EEe---------------------------cCCCEEEEeCC-ccCCHHHHHHHHHHHHHH
Confidence 211 01467999988 766677777776666543
No 252
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.81 E-value=5.9e-18 Score=167.91 Aligned_cols=292 Identities=11% Similarity=0.037 Sum_probs=189.3
Q ss_pred CCccccCCCC---hhHHHHHHHHHHHhCC-C--eEEEe-cChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHh
Q 013079 89 DFFIYSRHFN---PTVLNLSRQMAALEGT-E--AAYCT-ASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHF 161 (450)
Q Consensus 89 ~~~~y~r~~~---~~~~~l~~~iA~l~g~-~--~~~~t-sg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~ 161 (450)
+.+..+.... ...+++++.++++++. + .++++ +| |+.++.+++..++.+|+++++......+... .+.
T Consensus 35 g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gs---gt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~--~~~ 109 (360)
T PRK05355 35 SVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGG---ASLQFAMVPMNLLGGGKKADYVDTGSWSKKA--IKE 109 (360)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCC---chHHHHHHHHhcCCCCCeEEEEECCHHHHHH--HHH
Confidence 3344454444 6789999999999995 3 35555 66 9999999999999999888776655544433 123
Q ss_pred CCCccCeeEEEeCCC------CHHHHHH-hhhcCCceEEEEecCCCCccccc-CHHHHHHHHHhcCCEEEEeCCC--CCC
Q 013079 162 FPRACNITTTFVDIS------DHEMVNS-AIVQGRTKVLYFESISNPTLAVA-NIPELSRLAHDKGVTVVVDNTF--SPL 231 (450)
Q Consensus 162 ~~~~~g~~v~~v~~~------d~~~l~~-ai~~~~t~lv~i~~~~NptG~v~-~l~~I~~la~~~gi~livD~~~--~~~ 231 (450)
..+ .|.. ..+..+ +..++++ ++ ++++++|++.+..+.||.+. |+.+| +|++++||.++ +..
T Consensus 110 a~~-~g~~-~~~~~~~~~g~~~~~~~~~~~l-~~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~ 180 (360)
T PRK05355 110 AKK-YGEV-NVAASSEDDGFTYIPPLDEWQL-SDDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSR 180 (360)
T ss_pred HHH-hCCc-eEEecccccCCCCCCChhhccC-CCCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCc
Confidence 333 4543 332211 2234444 67 66899999999999999998 77776 89999999998 556
Q ss_pred CCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHH-h------hhhh-hccCCCchHHHHHH---HHccC-
Q 013079 232 VLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL-H------QGAL-MLLGPTMNPKVAFE---LSERI- 299 (450)
Q Consensus 232 ~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~-~------~~~~-~~~g~~~~~~~a~~---~~~~~- 299 (450)
.++..++ |+++.|.+|++|++| + |+++.+++.++++... . .... .....+++....+. ++..+
T Consensus 181 ~idv~~~--d~~~~ssqK~lgP~G--l-g~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~ 255 (360)
T PRK05355 181 PIDVSKF--GLIYAGAQKNIGPAG--L-TIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLK 255 (360)
T ss_pred cCCHHHc--cEEEEeccccccCCc--e-EEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHH
Confidence 6666554 599999999999888 5 8898888877654331 0 0000 01122333222222 22211
Q ss_pred -C-cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccc
Q 013079 300 -P-HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQ 377 (450)
Q Consensus 300 -~-~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~ 377 (450)
. .++.+.+++.++++++.+.|++++....... +.. ..+.+++|.+++......++..+..
T Consensus 256 ~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~----~~~-----------rs~~v~sf~~~~~~~~~~~~~~~~~--- 317 (360)
T PRK05355 256 EQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVA----PED-----------RSRMNVPFTLADEELDKKFLAEAKA--- 317 (360)
T ss_pred HccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCC----hhh-----------cCCcEEEEEcCChHHHHHHHHHHHH---
Confidence 2 4667778889999999999999874111110 110 1235899999875333455555442
Q ss_pred ccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 378 FGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 378 ~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
.|. .+..|. . ..+.||+|++ ..++.++++.|.++|+++..
T Consensus 318 ~Gi-~~~~~~----------~---------------~~g~vRiS~~-~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 318 AGL-VGLKGH----------R---------------SVGGMRASIY-NAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred CCC-cccCCC----------C---------------ccCcEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 221 112220 0 1478999999 99999999999999988754
No 253
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.81 E-value=2.6e-18 Score=186.02 Aligned_cols=293 Identities=18% Similarity=0.202 Sum_probs=197.7
Q ss_pred hhHHHHHHHHHHHhCCCeEEEecChHHHH----HHHHHHHHHhccC-CC----EEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 99 PTVLNLSRQMAALEGTEAAYCTASDKAGM----SAISSVLMQLCSS-GG----HVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~~~~~tsg~~~gt----~ai~~al~~l~~~-gd----~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
..+.++++.+++++|.+.+.|+++ ++ +|++++++++.++ || +||++..+|++....+. ..|++
T Consensus 568 ~~~~~~r~~la~i~g~~~v~f~pn---aga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~-----~~G~~ 639 (993)
T PLN02414 568 EMFEDLGDLLCEITGFDSFSLQPN---AGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA-----MCGMK 639 (993)
T ss_pred HHHHHHHHHHHHHhCCCeEEEcCC---CcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH-----HCCCE
Confidence 356899999999999999999999 77 8999999999866 87 89999999999988875 26889
Q ss_pred EEEeCCC-----CHHHHHHhhhc---CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CC-CCCCccCC
Q 013079 170 TTFVDIS-----DHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SP-LVLSPARL 238 (450)
Q Consensus 170 v~~v~~~-----d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~-~~~~~~~~ 238 (450)
+++++.+ |+++|++++ + ++|++|++++|+|-+|...|+++|+++||++|+++++|.++ +. ...+|.++
T Consensus 640 vv~v~~d~~G~vDle~L~~~i-~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~ 718 (993)
T PLN02414 640 IVVVGTDAKGNINIEELRKAA-EAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFI 718 (993)
T ss_pred EEEeccCCCCCcCHHHHHHHH-hccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCcccc
Confidence 9998864 899999999 5 47899999999999999999999999999999999999998 33 33567789
Q ss_pred CCeEEEeCCCCccccC---ccc-eEEEEEcCHHHHHHHHHHh--h-h------hhhccCCC--------chHHHHHH--H
Q 013079 239 GADVVVHSISKFISGG---ADI-IAGAVCGPANLVNSMMDLH--Q-G------ALMLLGPT--------MNPKVAFE--L 295 (450)
Q Consensus 239 g~di~~~S~sK~~g~~---g~~-igG~l~~~~~~~~~l~~~~--~-~------~~~~~g~~--------~~~~~a~~--~ 295 (450)
|+|++++|.||++++| |.+ + |+++.++.+...+-... . . .....|.. .....++. .
T Consensus 719 GaD~~~~s~HK~f~~P~G~GGPg~-G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~ 797 (993)
T PLN02414 719 GADVCHLNLHKTFCIPHGGGGPGM-GPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIA 797 (993)
T ss_pred CCCEEEecCCccCCcCcccCCCCe-eeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHH
Confidence 9999999999965522 112 4 88888876654432110 0 0 00011221 11112222 2
Q ss_pred HccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE-eCC--HHHHHHHHHHh
Q 013079 296 SERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD-MET--EEKANRLMNYL 372 (450)
Q Consensus 296 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~-l~~--~~~~~~~~~~l 372 (450)
..+.+.+.+..++...+++++.++|.+ +..+.+++-.+.-.|+ .++.+. ++. ...+..+.++|
T Consensus 798 ~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hE-------------fv~~~~~l~~~~g~~~~di~krL 863 (993)
T PLN02414 798 MMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHE-------------FIIDLRPFKNTAGIEPEDVAKRL 863 (993)
T ss_pred HHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeee-------------EEEeccccccccCCCHHHHHHHH
Confidence 223344555555667788999999977 3333333211100111 122222 221 11235566666
Q ss_pred hccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 373 QNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 373 ~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
.. +|+.+.... .| . .+.+||++. ..+..+++|.|.+++..+.+
T Consensus 864 ~d---~Gihapt~~-------~p-----------------v-~~~lmiepT-E~~skeelDrf~~al~~i~~ 906 (993)
T PLN02414 864 MD---YGFHAPTMS-------WP-----------------V-PGTLMIEPT-ESESKAELDRFCDALISIRE 906 (993)
T ss_pred HH---cCcEEeeec-------cc-----------------c-CCEEEEEee-eeCCHHHHHHHHHHHHHHHH
Confidence 53 342221100 01 1 578999999 87888888888888876643
No 254
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.81 E-value=8e-18 Score=168.49 Aligned_cols=285 Identities=13% Similarity=0.056 Sum_probs=184.5
Q ss_pred CChhHHHHHHHHHHHhCCC---eEEEec-ChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCe-eEE
Q 013079 97 FNPTVLNLSRQMAALEGTE---AAYCTA-SDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI-TTT 171 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~---~~~~ts-g~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~-~v~ 171 (450)
.....++.++.+++++++. .++|++ | ||+++++++.+++++++.+++..-+|+.-... ....+ .|+ +++
T Consensus 46 f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs---~T~~~~~~~~~l~~~~~~~vi~~g~f~~~~~~--~~~~~-~g~~~v~ 119 (378)
T PRK03080 46 VKALLKRVIEGTRELLSLPEGYEVGIVPGS---DTGAWEMALWSLLGARRVDHLAWESFGSKWAT--DVVKQ-LKLEDPR 119 (378)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEECCc---hHHHHHHHHHhcCCCCcceEEEeCHHHHHHHH--HHHhh-cCCCCce
Confidence 3567899999999999962 577775 8 99999999999887433334445567663322 11122 577 777
Q ss_pred EeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEE
Q 013079 172 FVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVV 244 (450)
Q Consensus 172 ~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~ 244 (450)
.++.+ |+++ + +. +++|++.+..|.||.+.|+++|++ +++|+++++|.++ +...++..+ +|+++
T Consensus 120 ~~~~~~g~~~d~~~----i-~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~ 189 (378)
T PRK03080 120 VLEADYGSLPDLSA----V-DF-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYT 189 (378)
T ss_pred EeccCCCCCCCHhh----c-CC-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEE
Confidence 76543 4443 4 32 677999999999999999999999 8899999999998 556666554 69999
Q ss_pred eCCCCcccc-CccceEEEEEcCHHHHHHHHHHhhhh---------------h-hc---cCCCchHHHH---HHHHccC--
Q 013079 245 HSISKFISG-GADIIAGAVCGPANLVNSMMDLHQGA---------------L-ML---LGPTMNPKVA---FELSERI-- 299 (450)
Q Consensus 245 ~S~sK~~g~-~g~~igG~l~~~~~~~~~l~~~~~~~---------------~-~~---~g~~~~~~~a---~~~~~~~-- 299 (450)
.|.||++++ +| + |+++.+++.++.+.....++ . .. +.++++.... ..++..+
T Consensus 190 ~s~~K~l~~P~G--~-g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~ 266 (378)
T PRK03080 190 FSWQKVLGGEGG--H-GMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANS 266 (378)
T ss_pred EehhhhCCCCCc--e-EEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHH
Confidence 999999975 66 4 88988888876654321000 0 00 1122222222 1122211
Q ss_pred C-cHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC---HHHHHHHHHHhhc
Q 013079 300 P-HLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET---EEKANRLMNYLQN 374 (450)
Q Consensus 300 ~-~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~---~~~~~~~~~~l~~ 374 (450)
. .++.+.+++.++.+++.+.|++++. .+..+. + . ...+.+++|.+++ .. ...++..+..
T Consensus 267 ~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~-~---~-----------~~s~~i~~~~~~~~~~~~-~~~~~~~l~~ 330 (378)
T PRK03080 267 IGGLDALIARTAANASVLYDWAEKTPWATPLVAD-P---A-----------TRSNTSVTLDFVDAQAAV-DAAAVAKLLR 330 (378)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCC-c---c-----------ccCccEEEEEcCCchHHH-HHHHHHHHHH
Confidence 1 3455667778888899999988864 333211 1 1 0123589998886 22 2235555533
Q ss_pred cccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 375 YAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 375 ~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
.+ +.+..|+.+. ..+.+|+|++ ..++.++++.|.++|+++.+
T Consensus 331 ~~----i~v~~g~~~~-----------------------~~~~vRis~~-~~~t~~di~~l~~al~~~~~ 372 (378)
T PRK03080 331 EN----GAVDIEPYRD-----------------------APNGLRIWCG-PTVEPADVEALTPWLDWAFE 372 (378)
T ss_pred cC----CeeccccccC-----------------------CCCcEEEecC-CCCCHHHHHHHHHHHHHHHH
Confidence 11 4444443210 1367999999 88888888888888877543
No 255
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.81 E-value=1.2e-17 Score=164.98 Aligned_cols=307 Identities=11% Similarity=0.054 Sum_probs=199.5
Q ss_pred HHHHHHhhcCCCCCC-CCCccccCCCC---hhHHHHHHHHHHHhCC-C--eEEEe-cChHHHHHHHHHHHHHhccCCCEE
Q 013079 73 PETMRRMFAGELGPD-RDFFIYSRHFN---PTVLNLSRQMAALEGT-E--AAYCT-ASDKAGMSAISSVLMQLCSSGGHV 144 (450)
Q Consensus 73 ~~~~~~~~~~~~~n~-~~~~~y~r~~~---~~~~~l~~~iA~l~g~-~--~~~~t-sg~~~gt~ai~~al~~l~~~gd~V 144 (450)
++++.+++...- |. .+.|..+.... ...+++++.++++++. + .++|+ +| ||+|+++++..++.+|+++
T Consensus 8 ~~~~~~~~~~~~-~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gs---gT~a~ea~~~nl~~~~~~~ 83 (349)
T TIGR01364 8 LEQAQKELLNFN-GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGG---ATGQFAAVPLNLLAEGKVA 83 (349)
T ss_pred HHHHHHHHhCcc-CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCC---chHHHHHHHHhcCCCCCeE
Confidence 466776665432 32 34566666655 6789999999999995 2 36555 66 9999999999999889988
Q ss_pred EEeCCCchhHHHHHHHhCCCccCeeEEEeC---------CCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHH
Q 013079 145 VAARTLYGGTHALLTHFFPRACNITTTFVD---------ISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLA 215 (450)
Q Consensus 145 i~~~~~y~~~~~~~~~~~~~~~g~~v~~v~---------~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la 215 (450)
++......+... .....+ .|. +..+. ..++++++ + ++++++|++.+..+.||...+ +++
T Consensus 84 l~i~~G~fg~r~--~~~a~~-~g~-~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~v~~th~ETstGv~~~-----~l~ 151 (349)
T TIGR01364 84 DYIVTGAWSKKA--AKEAKK-YGV-VNVVASGKEGNYTKIPDPSTWE--I-SEDAAYVHYCANETIHGVEFR-----ELP 151 (349)
T ss_pred EEEECCHHHHHH--HHHHHH-hCC-cEEEeccccCCCCCCCCHHhcC--C-CCCCCEEEEcCCCCcccEecc-----eec
Confidence 877666555443 233333 566 44333 22555444 3 568999999999999999876 667
Q ss_pred HhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHH-------hhhh-hhccCC
Q 013079 216 HDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL-------HQGA-LMLLGP 285 (450)
Q Consensus 216 ~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~-------~~~~-~~~~g~ 285 (450)
+.++++++||.++ +...++..++ |+++.|.+|++||+| + |+++.+++.++++... .... ......
T Consensus 152 ~~~~~l~iVDavss~g~~~id~~~~--d~~~~ssqK~lgP~G--l-g~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (349)
T TIGR01364 152 DVKNAPLVADMSSNILSRPIDVSKF--GLIYAGAQKNIGPAG--L-TVVIVRKDLLGRASRITPSMLNYKIHAENDSMYN 226 (349)
T ss_pred ccCCCeEEEEccccccCccCCHHHc--cEEEEecccccCCCc--e-EEEEECHHHHhhcccCCCCcchHHHHHhcCCCCC
Confidence 7789999999997 6666666654 599999999999888 5 8888888877655221 1000 001112
Q ss_pred CchHHHHHH---HHccC--C-cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013079 286 TMNPKVAFE---LSERI--P-HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 359 (450)
Q Consensus 286 ~~~~~~a~~---~~~~~--~-~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 359 (450)
+++....+. ++..+ + .++.+.+++.++++++.+.|++++. +..+... |.. ..+.+++|.+
T Consensus 227 Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~g-l~~~~~~--~~~-----------rs~~v~sf~~ 292 (349)
T TIGR01364 227 TPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNG-FYRNPVD--PRN-----------RSRMNVVFTL 292 (349)
T ss_pred CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC-eeccCCC--HHH-----------cCCeEEEEec
Confidence 333222222 22211 2 3667778889999999999999853 2112110 110 1235799998
Q ss_pred CCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013079 360 ETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 360 ~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 439 (450)
++......++..+.. .| +++..|.. ..+.||+|++ ..++.++++.|.++|
T Consensus 293 ~~~~~~~~~~~~~~~---~G-i~~~~~~~-------------------------~~g~vRvS~~-~~nt~edid~l~~al 342 (349)
T TIGR01364 293 GNEELEKRFLKEAEE---RG-LVSLKGHR-------------------------SVGGMRASIY-NAMPLEGVQALVDFM 342 (349)
T ss_pred CChhHhHHHHHHHHH---CC-CcccCCcc-------------------------ccCeeEEECc-CCCCHHHHHHHHHHH
Confidence 854222455454433 23 23222210 1368999999 999999999999999
Q ss_pred HHhhh
Q 013079 440 SRMQD 444 (450)
Q Consensus 440 ~~~~~ 444 (450)
+++.+
T Consensus 343 ~~~~~ 347 (349)
T TIGR01364 343 KEFQK 347 (349)
T ss_pred HHHHH
Confidence 98754
No 256
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=3.3e-17 Score=164.82 Aligned_cols=282 Identities=16% Similarity=0.160 Sum_probs=177.4
Q ss_pred cccccCccccCCH-HHHHHhhcCCCCCCCCCccccCCCChhHH----HHHHHHHHHhCCCeE-EEecChHHHHHHHHHHH
Q 013079 61 SIEASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVL----NLSRQMAALEGTEAA-YCTASDKAGMSAISSVL 134 (450)
Q Consensus 61 pi~~att~~~~~~-~~~~~~~~~~~~n~~~~~~y~r~~~~~~~----~l~~~iA~l~g~~~~-~~tsg~~~gt~ai~~al 134 (450)
.+.+|..++.+.+ +.+-..+...|..-..+..|= .+...++ .+.++..+++|++.+ +=.-| |+.|+.+++
T Consensus 53 ~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy-~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~S---g~~An~~v~ 128 (493)
T PRK13580 53 KLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFY-AGCQNVDTVEWEAAEHAKELFGAEHAYVQPHS---GADANLVAF 128 (493)
T ss_pred eEecccccCCHHHHHHhcccccccCcCCCCCcccc-CCCchHHHHHHHHHHHHHHHhCCCcccccCCC---cHHHHHHHH
Confidence 4567777776654 555555555443211112221 1233333 344556668898876 44456 899999999
Q ss_pred HHhccC-------------------------------CCEEEEeCCCchhHHHHHHHhCCCccC--eeEEEeCC------
Q 013079 135 MQLCSS-------------------------------GGHVVAARTLYGGTHALLTHFFPRACN--ITTTFVDI------ 175 (450)
Q Consensus 135 ~~l~~~-------------------------------gd~Vi~~~~~y~~~~~~~~~~~~~~~g--~~v~~v~~------ 175 (450)
.++++| ||+|+..+..+++....- ......| ..+..+++
T Consensus 129 ~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg--~~~n~~~~~~~~~~y~vd~~~g~ 206 (493)
T PRK13580 129 WAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG--FRPNISGKMFHQRSYGVDPDTGL 206 (493)
T ss_pred HHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC--cccchhhheeeeEecccCcccCc
Confidence 999876 799998887775543221 0000011 23333322
Q ss_pred CCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCC-------CccCCCCeEEEeC
Q 013079 176 SDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVL-------SPARLGADVVVHS 246 (450)
Q Consensus 176 ~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~-------~~~~~g~di~~~S 246 (450)
.|.+++++.+ +++++.|++...+|- +.+.|+++|.++|+++|+++++|+++ +.+.. ++. .++|++++|
T Consensus 207 iD~d~l~~~~-~~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~-~~~D~vtgT 283 (493)
T PRK13580 207 LDYDEIAALA-REFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPV-PHADIVTTT 283 (493)
T ss_pred cCHHHHHHHH-hhcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCC-CCCcEEEeC
Confidence 2889999999 778888888888887 55889999999999999999999998 33321 222 268999999
Q ss_pred CCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHH-HHccC--CcHHHHHHHHHHHHHHHHHHHHhC
Q 013079 247 ISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFE-LSERI--PHLGLRMKEHCHRALIFARRMKKL 323 (450)
Q Consensus 247 ~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~-~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~ 323 (450)
+||++.++. ||++++++++++.+...+. ....++.+...++.. ++... ....++.++..++.++|++.|++.
T Consensus 284 ~hKaL~GP~---GG~I~~~~~l~~~L~~a~P--~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~ 358 (493)
T PRK13580 284 THKTLRGPR---GGLVLAKKEYADAVDKGCP--LVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR 358 (493)
T ss_pred ChhhccCCC---eEEEEecHHHHHHHhhCCC--cccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 999995443 5999999888888753332 122333333322222 22221 223456777899999999999999
Q ss_pred CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHH-HHHHHHhhc
Q 013079 324 GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKA-NRLMNYLQN 374 (450)
Q Consensus 324 ~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~-~~~~~~l~~ 374 (450)
|+.+...+. -.+++.+.+.+.... ..+.+.|..
T Consensus 359 G~~vv~ggT------------------dshIV~V~lg~~~~~g~~a~~~L~e 392 (493)
T PRK13580 359 GARLVTGGT------------------DNHLVLIDVTSFGLTGRQAESALLD 392 (493)
T ss_pred CCCccCCCC------------------CCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 886543221 134899999854422 244445554
No 257
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.79 E-value=3.2e-18 Score=151.00 Aligned_cols=153 Identities=19% Similarity=0.237 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHh--CCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHH-HHHHHhCCCccCeeEEEeCCC-
Q 013079 101 VLNLSRQMAALE--GTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTH-ALLTHFFPRACNITTTFVDIS- 176 (450)
Q Consensus 101 ~~~l~~~iA~l~--g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~-~~~~~~~~~~~g~~v~~v~~~- 176 (450)
.+++++.+++++ +.+.+++++| |++|+.+++.++..++++|+++++.|++.. ..+. ..|.++.+++.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~---~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~~g~~~~~v~~~~ 73 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPS---GTGANEAALLALLGPGDEVIVDANGHGSRYWVAAE-----LAGAKPVPVPVDD 73 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCC---cHHHHHHHHHHhCCCCCEEEEeecccceehhhHHH-----hcCCEEEEeccCC
Confidence 468999999999 7888999999 999999999999888999999999999887 4432 268888887754
Q ss_pred ----CH--HHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCC-----CccCCCCeEEEe
Q 013079 177 ----DH--EMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL-----SPARLGADVVVH 245 (450)
Q Consensus 177 ----d~--~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~-----~~~~~g~di~~~ 245 (450)
+. +.+++....++++++++++++|++|...|+++|.++|+++|+++|+|++|..+.. ++...++|+++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~ 153 (170)
T cd01494 74 AGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTF 153 (170)
T ss_pred CCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEE
Confidence 11 2444444357899999999999999999999999999999999999999843332 244558999999
Q ss_pred CCCCccccCccceEEEEEc
Q 013079 246 SISKFISGGADIIAGAVCG 264 (450)
Q Consensus 246 S~sK~~g~~g~~igG~l~~ 264 (450)
|+||++++++ . |+++.
T Consensus 154 s~~K~~~~~~--~-G~l~~ 169 (170)
T cd01494 154 SLHKNLGGEG--G-GVVIV 169 (170)
T ss_pred EcccccCCCc--e-EEEEe
Confidence 9999999855 4 88865
No 258
>PLN02624 ornithine-delta-aminotransferase
Probab=99.79 E-value=3.6e-17 Score=167.97 Aligned_cols=254 Identities=14% Similarity=0.199 Sum_probs=163.1
Q ss_pred CCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc---------CCC-EEEEeCCCchhHHHHHHHh----
Q 013079 96 HFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS---------SGG-HVVAARTLYGGTHALLTHF---- 161 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~---------~gd-~Vi~~~~~y~~~~~~~~~~---- 161 (450)
..++...++.+.|+++.+.+.++|++| |++|+..|++.... +++ .|+.....|++........
T Consensus 114 ~~~~~~~~la~~L~~~~~~~~~~f~~S---GseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~ 190 (474)
T PLN02624 114 FYNDKFPEFAEYLTSMFGYDMVLPMNT---GAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDN 190 (474)
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEEeCC---hHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCc
Confidence 457788899999999998889999999 99999999974332 123 5777777787753222111
Q ss_pred ------CCCccCeeEEEeCCCCHHHHHHhhhc--CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCC
Q 013079 162 ------FPRACNITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFS 229 (450)
Q Consensus 162 ------~~~~~g~~v~~v~~~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~ 229 (450)
.+. ...+.+++..|++.+++.+.. +++++|++++++|++|.+.| +++|.++|++||+++|+||+|+
T Consensus 191 ~~~~~~~~~--~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t 268 (474)
T PLN02624 191 EATRGFGPL--LPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT 268 (474)
T ss_pred cccccCCCC--CCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 011 112445666789999998832 46889999999999999987 9999999999999999999996
Q ss_pred CCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcH
Q 013079 230 PLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHL 302 (450)
Q Consensus 230 ~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l 302 (450)
++... ......|+++ ++|.+|++++++ |+++.+++++..+..... ..+..++.+.+.++...+..++.
T Consensus 269 G~GrtG~~~a~~~~~i~pDiv~--lsK~lggG~~pi-gav~~~~~i~~~~~~~~~-~~T~~g~pl~~aaa~aaLe~l~~- 343 (474)
T PLN02624 269 GLARTGKMLACDWEEVRPDVVI--LGKALGGGVIPV-SAVLADKDVMLCIKPGEH-GSTFGGNPLASAVAMAALQVVQD- 343 (474)
T ss_pred CcCcCcchhhHHhcCCCCCEEE--ecccccCCCCcc-eeeeecHHHHhHhccCCc-CCCCCCCHHHHHHHHHHHHHHHh-
Confidence 55321 1223467777 689999877888 888888877766543222 12223444444444333332221
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeCCC-CCCCchhHHHHHHhccCCCcCcEEEEEeCC----HHHHHHHHHHhhc
Q 013079 303 GLRMKEHCHRALIFARRMKKLGLKVLYPG-LEDHPHHELLKSMANKEYGFGGLLCLDMET----EEKANRLMNYLQN 374 (450)
Q Consensus 303 ~~~~~~~~~~~~~l~~~L~~~~~~v~~p~-~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~----~~~~~~~~~~l~~ 374 (450)
....++..++.+.+.+.|+++..+ +|. +. +..|.|.++.+.+.. ...+..+...|..
T Consensus 344 ~~l~~~~~~~~~~l~~~L~~l~~~--~~~~i~-------------~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e 405 (474)
T PLN02624 344 EKLAERSAKLGQELRDQLQKIQKQ--FPKLIK-------------EVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKE 405 (474)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHh--CCCceE-------------EEEeeEEEEEEEecCCCcChHHHHHHHHHHHh
Confidence 112233445555666666553211 110 00 112567788888863 2345667777654
No 259
>PLN00144 acetylornithine transaminase
Probab=99.79 E-value=4.8e-17 Score=162.87 Aligned_cols=252 Identities=15% Similarity=0.200 Sum_probs=158.6
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc---cC------------CCEEEEeCCCchhHHHHHHHh
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC---SS------------GGHVVAARTLYGGTHALLTHF 161 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~---~~------------gd~Vi~~~~~y~~~~~~~~~~ 161 (450)
.++...++.++|+++.+.+.++|++| |+||+..|++... .. ..+|+.....||+........
T Consensus 55 ~~~~~~~la~~l~~~~~~~~v~f~~s---GseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~ 131 (382)
T PLN00144 55 HTIPQVELAKRLVASSFADRVFFCNS---GTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALAL 131 (382)
T ss_pred cCHHHHHHHHHHHhcCCCCeEEEeCC---cHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhc
Confidence 36677889999998877788999999 9999999998542 10 246899998998865333211
Q ss_pred CC----C-cc---CeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCccccc--C--HHHHHHHHHhcCCEEEEeCCCC
Q 013079 162 FP----R-AC---NITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA--N--IPELSRLAHDKGVTVVVDNTFS 229 (450)
Q Consensus 162 ~~----~-~~---g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~--~--l~~I~~la~~~gi~livD~~~~ 229 (450)
.. + .+ -..+.+++..|++.+++.+...++++|++++.+||.|... + +++|.++|++||+++|+||+|+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t 211 (382)
T PLN00144 132 TSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC 211 (382)
T ss_pred CCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 00 0 00 1124566777999999988446789999999999955543 3 8899999999999999999986
Q ss_pred CCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcH
Q 013079 230 PLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHL 302 (450)
Q Consensus 230 ~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l 302 (450)
++... ...+..| +.|++|.++ +|.++ |+++.++++++.+..... ..+..++.+.+.++...+..++.
T Consensus 212 g~gr~g~~~~~~~~~~~PD--i~t~sK~l~-~G~pi-g~v~~~~~~~~~~~~~~~-~~T~~~~pl~~aaa~a~l~~i~~- 285 (382)
T PLN00144 212 GLGRTGYLWAHEAYGVEPD--IMTLAKPLA-GGLPI-GAVLVTEKVASAINPGDH-GSTFAGGPLVCNAALAVLDKISK- 285 (382)
T ss_pred CCCccchHhhhhhcCCCCC--EEEeccccc-CCcce-EEEEEcHHHHhccCCCCC-CCCCCCCHHHHHHHHHHHHHHhh-
Confidence 55322 1223467 455999999 57898 999999888887753222 22234444444444433333221
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 303 GLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 303 ~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
....++..+..+++.+.|++.-.+ +|... +.+|.|.++++++.. ....+...+..
T Consensus 286 ~~~~~~~~~~g~~l~~~l~~~~~~--~~~~~-------------~vrg~G~~~~l~l~~--~~~~~~~~~~~ 340 (382)
T PLN00144 286 PGFLASVAKKGEYLRELLRRKLGG--NPHVK-------------EVRGVGLLVGIQLDV--PAGPLVDACRD 340 (382)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhh--CCCce-------------eeecCceEEEEEecC--ccHHHHHHHHH
Confidence 112223333334444444331000 11100 122678899999942 13456666554
No 260
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.79 E-value=3.8e-17 Score=163.69 Aligned_cols=278 Identities=12% Similarity=0.157 Sum_probs=169.5
Q ss_pred HHHHHHHHHHh-CC-C-eEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHH-HHHHHh----CCCccCe---
Q 013079 102 LNLSRQMAALE-GT-E-AAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTH-ALLTHF----FPRACNI--- 168 (450)
Q Consensus 102 ~~l~~~iA~l~-g~-~-~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~-~~~~~~----~~~~~g~--- 168 (450)
..+++.+|+.+ +. + .++|++| |++|+..+++... ..+++|++.+..||+.. ..+... .....+.
T Consensus 69 ~~~~~~la~~l~~~~~~~~~~~~S---GseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~ 145 (375)
T PRK04260 69 NSLQEEVAQKLIGDKDYLAFFCNS---GAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVP 145 (375)
T ss_pred CHHHHHHHHHHhcCcCCEEEEcCc---cHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCC
Confidence 34555666543 22 2 3589999 9999999998652 34578999999888643 222100 0000111
Q ss_pred eEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCC--c-----cC
Q 013079 169 TTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLS--P-----AR 237 (450)
Q Consensus 169 ~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~--~-----~~ 237 (450)
.+.+.+..|++++++.+ ++++++|++++++|++|.+.+ +++|.++|+++|+++|+|++|+++... + ..
T Consensus 146 ~~~~~~~~dl~~l~~~l-~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~ 224 (375)
T PRK04260 146 HFSYAIFNDLNSVKALV-NKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYG 224 (375)
T ss_pred CeEEeCCCCHHHHHHhc-CCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhC
Confidence 13334456899999988 778899999999999999865 899999999999999999998555321 1 11
Q ss_pred CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCC--cHHHHH-HHHHHHHH
Q 013079 238 LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP--HLGLRM-KEHCHRAL 314 (450)
Q Consensus 238 ~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~--~l~~~~-~~~~~~~~ 314 (450)
+..|++ |+||.++ +|.++ |++++++++.+.+..... ..+..++.+.+.++...+...+ .+.++. +.....++
T Consensus 225 ~~pdi~--t~sK~l~-~G~~i-g~~~~~~~~~~~~~~~~~-~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~ 299 (375)
T PRK04260 225 IEPDIF--TLAKGLA-NGVPV-GAMLAKSSLGGAFGYGSH-GSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQE 299 (375)
T ss_pred CCCCEE--Eeccccc-CCcce-EEEEEcHHHHhhcCCCCC-CCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 245654 6999999 57888 999999888777643211 1223334444444444433222 122222 22233444
Q ss_pred HHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccc
Q 013079 315 IFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSC 394 (450)
Q Consensus 315 ~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~ 394 (450)
.+.+.+.+++..... .+.|.++++++.. ....|.+.+... | +.+.
T Consensus 300 ~l~~~~~~~~~~~~~-------------------~~~g~~~~~~~~~--~~~~~~~~l~~~---G-i~v~---------- 344 (375)
T PRK04260 300 QLQKALQDKETVTTV-------------------RGLGYMIGIETTA--DLSQLVEAARDK---G-LIVL---------- 344 (375)
T ss_pred HHHHHHhhCCCeeEE-------------------eccceEEEEEecC--cHHHHHHHHHhC---C-CEEe----------
Confidence 444444443321111 1467799999853 245677776642 3 2221
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 395 SGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 395 ~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
+. ..+.|||++. ...+++.++.+.+.+++
T Consensus 345 ~~-----------------~~~~lR~~~~-~~~t~~~i~~~l~~l~~ 373 (375)
T PRK04260 345 TA-----------------GTNVIRLLPP-LTLTKEEIEQGIAILSE 373 (375)
T ss_pred cC-----------------CCCEEEEcCC-CccCHHHHHHHHHHHHH
Confidence 00 1367999997 65557777776666654
No 261
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.78 E-value=5.3e-17 Score=163.60 Aligned_cols=257 Identities=14% Similarity=0.173 Sum_probs=160.1
Q ss_pred CCChhHHHHHHHHHHHhC-CCeEEEecChHHHHHHHHHHHHHhcc----CC-----CEEEEeCCCchhHHHHHHHhC--C
Q 013079 96 HFNPTVLNLSRQMAALEG-TEAAYCTASDKAGMSAISSVLMQLCS----SG-----GHVVAARTLYGGTHALLTHFF--P 163 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g-~~~~~~tsg~~~gt~ai~~al~~l~~----~g-----d~Vi~~~~~y~~~~~~~~~~~--~ 163 (450)
..++...++.++|+++.+ .+.++|++| |+||+..|++.... .| .+|+.....||+......... +
T Consensus 79 ~~~~~~~~la~~L~~~~~~~~~v~f~~s---GseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~ 155 (408)
T PRK04612 79 FYSAPPLKLAEELVTASRFAEKVFLCNS---GTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQP 155 (408)
T ss_pred cCCHHHHHHHHHHHhhCCCCCEEEEcCc---hHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCc
Confidence 345667788888888764 467999999 99999999975421 12 368998998988643321110 0
Q ss_pred C-ccC-----eeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC
Q 013079 164 R-ACN-----ITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL 233 (450)
Q Consensus 164 ~-~~g-----~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~ 233 (450)
. ..+ ..+.+++..|++.+++++..+++.+|+++..+...|.+.+ +++|.++|+++|+++|+||+|+++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr 235 (408)
T PRK04612 156 KYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGR 235 (408)
T ss_pred ccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 0 001 1235566679999999883345667777765554444432 88999999999999999999965543
Q ss_pred Cc-----cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHH
Q 013079 234 SP-----ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKE 308 (450)
Q Consensus 234 ~~-----~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~ 308 (450)
.. ...+.+..+.+++|.++ +|+++ |+++.++++.+.+..... ..+..++.+.+.++...+..++. +...++
T Consensus 236 ~G~~~a~~~~~~~pdi~t~~K~l~-~G~pi-ga~~~~~~~~~~~~~~~~-~~t~~~~p~~~aaa~a~L~~~~~-~~l~~~ 311 (408)
T PRK04612 236 TGTLFAHWQEQVTPDIVTLAKALG-GGFPI-GAMLAGPKVAETMQFGAH-GTTFGGNPLAAAVARVALRKLAS-PQIAAN 311 (408)
T ss_pred CCchhhhhhcCCCCCEEEEcchhc-CCCce-EEEEECHHHHhhhcCCCc-CCCCCCCHHHHHHHHHHHHHHHh-ccHHHH
Confidence 22 12244555566999999 57998 788877777776654222 22233443444444333333222 233455
Q ss_pred HHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhc
Q 013079 309 HCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQN 374 (450)
Q Consensus 309 ~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~~~l~~ 374 (450)
..++.+++.+.|+++..+..... +.+|.|.++.+++.. ...+..+++.+..
T Consensus 312 ~~~~g~~l~~~l~~l~~~~~~i~---------------~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~ 364 (408)
T PRK04612 312 VARQSAALRAGLEALNAEFGVFA---------------QVRGRGLMLGAVLAPAHAGQAGAILDLAAE 364 (408)
T ss_pred HHHHHHHHHHHHHHHHhhCCCee---------------eeeccceEEEEEecCchhhHHHHHHHHHHH
Confidence 56666777777766422211111 223788999999852 2335667666664
No 262
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.78 E-value=1.7e-16 Score=159.58 Aligned_cols=210 Identities=15% Similarity=0.161 Sum_probs=155.6
Q ss_pred hhHHHHHHHHHHHhCCC---eEEEecChHHHH-HHHHHHHHHhcc---CCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 99 PTVLNLSRQMAALEGTE---AAYCTASDKAGM-SAISSVLMQLCS---SGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~---~~~~tsg~~~gt-~ai~~al~~l~~---~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
...+++++.+++++|.+ .++++++ || .++.+++.++-. +||.||+++..|.++...+. ..|.+++
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~---~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~-----~~G~~pv 176 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPL---ATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIS-----TAGFEPR 176 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECC---HHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHH-----HcCCeEE
Confidence 35688999999999987 6899999 99 688888776532 58999999999999988875 4788888
Q ss_pred EeCC--C------CHHHHHHhhhcC---CceEEEEecCC-CCcccccCHHHHHHHHHhcCCEEEEeCCCCCCC-C-----
Q 013079 172 FVDI--S------DHEMVNSAIVQG---RTKVLYFESIS-NPTLAVANIPELSRLAHDKGVTVVVDNTFSPLV-L----- 233 (450)
Q Consensus 172 ~v~~--~------d~~~l~~ai~~~---~t~lv~i~~~~-NptG~v~~l~~I~~la~~~gi~livD~~~~~~~-~----- 233 (450)
+++. + |+++|+++| ++ ++.++++.+++ +++|...|+++|+++|++||+++|+|++|+... .
T Consensus 177 ~Vd~~~d~~~~~iD~e~Le~aI-t~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~ 255 (444)
T TIGR03531 177 VIETVLDGDELTTDVEDIERAI-EEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELI 255 (444)
T ss_pred EeeeeecCcCCCcCHHHHHHHH-HhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhh
Confidence 8873 1 899999999 54 55666666664 556688999999999999999999999995321 1
Q ss_pred -CccCCC-CeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhhhhhhccCCCchHHHHHH--HHccCCcHHHHHHH
Q 013079 234 -SPARLG-ADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGALMLLGPTMNPKVAFE--LSERIPHLGLRMKE 308 (450)
Q Consensus 234 -~~~~~g-~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~--~~~~~~~l~~~~~~ 308 (450)
.....| +|+++.|+||++..+++ ||+++. ++++++.+.....+ ...+.+.+ .+++ ...+.+.+.+.+++
T Consensus 256 ~~g~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g---~~~~s~~~-~~~~~ll~~G~~g~~~li~~ 329 (444)
T TIGR03531 256 NKAIKVGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPG---RASASPSL-DVLITLLSLGSKGYLELLKE 329 (444)
T ss_pred hccccccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccC---CCCChHHH-HHHHHHHHhCHHHHHHHHHH
Confidence 122344 69999999999998775 576645 77888777654331 11222222 2333 22255667788888
Q ss_pred HHHHHHHHHHHHHhC
Q 013079 309 HCHRALIFARRMKKL 323 (450)
Q Consensus 309 ~~~~~~~l~~~L~~~ 323 (450)
+.++++++.+.|+++
T Consensus 330 ~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 330 RKEMYKYLKELLQKL 344 (444)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888999999998765
No 263
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.77 E-value=6.5e-17 Score=164.61 Aligned_cols=222 Identities=14% Similarity=0.166 Sum_probs=145.3
Q ss_pred CChhHHHHHHHHHHHhC-CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHh------------
Q 013079 97 FNPTVLNLSRQMAALEG-TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHF------------ 161 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g-~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~------------ 161 (450)
.++...+++++|+++.. .+.++||+| |++|+..+++... ..+++||+..+.|++....+...
T Consensus 86 ~~~~~~~lae~l~~~~~~~~~v~~~~s---GseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 162 (423)
T TIGR00713 86 PTEAEILLAKEIISRVPSVEMVRFVNS---GTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPT 162 (423)
T ss_pred CCHHHHHHHHHHHHhCCcccEEEEeCC---HHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCC
Confidence 45677899999999875 367999999 9999999998542 24589999999999965332110
Q ss_pred CC---CccCeeEEEeCCCCHHHHHHhhhc--CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCC
Q 013079 162 FP---RACNITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLV 232 (450)
Q Consensus 162 ~~---~~~g~~v~~v~~~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~ 232 (450)
.+ ...+..+..++..|++++++++.+ +++++|++++..+.+|.+.+ +++|.++|++||+++|+||+|+++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r 242 (423)
T TIGR00713 163 SPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFR 242 (423)
T ss_pred CCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccc
Confidence 00 000112344455689999998832 57889999855444898866 7899999999999999999996553
Q ss_pred CC------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh--hhhhccCCCchHHHHHHHHccCCc--H
Q 013079 233 LS------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFELSERIPH--L 302 (450)
Q Consensus 233 ~~------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~~~~~~~--l 302 (450)
.. ......|++ +++|.++ .|+|+ |++++++++++.+..... ...+..++.+.+.++...+..++. +
T Consensus 243 ~g~~~~~~~~~~~pDi~--t~sK~l~-~G~pi-g~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~ 318 (423)
T TIGR00713 243 VALGGAQEYFGVEPDLT--TLGKIIG-GGLPV-GAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGV 318 (423)
T ss_pred cCcchhHHHhCCCcchh--hhhhhhc-CCCce-eeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccH
Confidence 21 112235654 6999999 78998 999999988887753211 112233444444444444443322 2
Q ss_pred HHHHH-HHHHHHHHHHHHHHhCCC
Q 013079 303 GLRMK-EHCHRALIFARRMKKLGL 325 (450)
Q Consensus 303 ~~~~~-~~~~~~~~l~~~L~~~~~ 325 (450)
.++.+ ....+++.+.+.+++++.
T Consensus 319 ~~~~~~~~~~~~~~l~~~~~~~~~ 342 (423)
T TIGR00713 319 YTELDELAKRLAEGLSEVLEDTGI 342 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 22322 234455556665666554
No 264
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.77 E-value=1.9e-16 Score=157.16 Aligned_cols=220 Identities=18% Similarity=0.169 Sum_probs=149.2
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHH-HHHhCCCccCeeEEEeCC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHAL-LTHFFPRACNITTTFVDI 175 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~-~~~~~~~~~g~~v~~v~~ 175 (450)
+.|+..+|++.+++++|.+.+++|+| |+.|++++....+++||.| +.+.|..+... +. ..|....-++.
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~s---GT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe-----~~Gav~vDi~~ 138 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQ---GRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQE-----KNGATFVDIII 138 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCC---HHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHH-----hCCeEEEeeec
Confidence 67899999999999999999999999 9999998766678999976 66777544443 43 24543333311
Q ss_pred ---------------CCHHHHHHhhhcC----CceEEEEecCCCCc-ccc---cCHHHHHHHHHhcCCEEEEeCCC-C-C
Q 013079 176 ---------------SDHEMVNSAIVQG----RTKVLYFESISNPT-LAV---ANIPELSRLAHDKGVTVVVDNTF-S-P 230 (450)
Q Consensus 176 ---------------~d~~~l~~ai~~~----~t~lv~i~~~~Npt-G~v---~~l~~I~~la~~~gi~livD~~~-~-~ 230 (450)
.|+++|+++| ++ ++++|.++.++|-. |.+ .++++|.++|+++|+++|.|.+. . .
T Consensus 139 dea~~~~~~~p~~GniD~~~Le~aI-~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gN 217 (450)
T TIGR02618 139 DEAHDAQLNIPFKGNVDLKKLQKLI-DEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVEN 217 (450)
T ss_pred ccccccccCCCCCCCcCHHHHHHHh-ccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhC
Confidence 1899999999 54 45678888888865 677 45899999999999999999986 2 1
Q ss_pred --CC------C---Ccc----CC--CCeEEEeCCCCccccCccceEEEEE-cCHHHHHHHHHHhhh--hhhccCCCchHH
Q 013079 231 --LV------L---SPA----RL--GADVVVHSISKFISGGADIIAGAVC-GPANLVNSMMDLHQG--ALMLLGPTMNPK 290 (450)
Q Consensus 231 --~~------~---~~~----~~--g~di~~~S~sK~~g~~g~~igG~l~-~~~~~~~~l~~~~~~--~~~~~g~~~~~~ 290 (450)
+. + ++. ++ .+|.++.|++|..+.+ +||+++ .+++++++++..+.- .....|. ++..
T Consensus 218 A~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGg-la~r 293 (450)
T TIGR02618 218 AYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYGG-LAGR 293 (450)
T ss_pred hhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccCc-hhhh
Confidence 11 1 110 11 5899999999999877 578887 788899888776431 1112222 2221
Q ss_pred HHHHHHccCCc-HHH-HHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013079 291 VAFELSERIPH-LGL-RMKEHCHRALIFARRMKKLGLKVLYPG 331 (450)
Q Consensus 291 ~a~~~~~~~~~-l~~-~~~~~~~~~~~l~~~L~~~~~~v~~p~ 331 (450)
...++..++++ ... ...+.....++|.+.|++.|..+..|.
T Consensus 294 ~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ 336 (450)
T TIGR02618 294 DMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAAGVPIVEPV 336 (450)
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Confidence 11111112222 222 223335568899999999887765553
No 265
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.77 E-value=4.8e-17 Score=161.65 Aligned_cols=289 Identities=9% Similarity=0.026 Sum_probs=183.0
Q ss_pred ChhHHHHHHHHHHHhCCC---eEEEe-cChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 98 NPTVLNLSRQMAALEGTE---AAYCT-ASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~---~~~~t-sg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
...+++.++.+++++++. .++|+ +| ||.++++++.+++.. +.+++..-.|..-........+. .+ ++..+
T Consensus 40 ~~~~~~~r~~l~~l~~~~~~~~v~f~~gs---~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~-~~-~~~~~ 113 (361)
T TIGR01366 40 KNLVGRVREGLAELFSLPDGYEVILGNGG---ATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPW-LG-EPIIV 113 (361)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCc---hhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhc-cC-CceEE
Confidence 467899999999999972 46775 78 999999999988743 44455566676555544444332 23 55555
Q ss_pred CCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCcc
Q 013079 174 DISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFI 251 (450)
Q Consensus 174 ~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~ 251 (450)
+.+..+.++..+ .+++++|++.+..|.||.++|+++| +|++|+++++|.++ +...++..+ +|++++|.+|++
T Consensus 114 ~~~~~~~~~~~~-~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~l 187 (361)
T TIGR01366 114 TADPGSAPEPQA-DPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNF 187 (361)
T ss_pred ecCCCCCCCCcc-CCCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhc
Confidence 543223344445 6789999999999999999999988 58899999999997 555555543 799999999999
Q ss_pred ccCccceEEEEEcCHHHHHHHHHHhhh------h------h-----hccCCCchHHHH---HHHHccCC---cHHHHHHH
Q 013079 252 SGGADIIAGAVCGPANLVNSMMDLHQG------A------L-----MLLGPTMNPKVA---FELSERIP---HLGLRMKE 308 (450)
Q Consensus 252 g~~g~~igG~l~~~~~~~~~l~~~~~~------~------~-----~~~g~~~~~~~a---~~~~~~~~---~l~~~~~~ 308 (450)
|+++. + ++++.++++++++.....+ . . ..+.+++..... ..++..+. .++.+.++
T Consensus 188 g~~~G-l-~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r 265 (361)
T TIGR01366 188 ASDGG-L-WLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVAR 265 (361)
T ss_pred CCCCc-e-EEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 99864 3 5566777776655421110 0 0 011233332211 12222221 25556678
Q ss_pred HHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccc
Q 013079 309 HCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGY 387 (450)
Q Consensus 309 ~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~ 387 (450)
+.++++++.+.|++.+. ++..+. +.... ..-++++| +.......+...|... | |.+..|.
T Consensus 266 ~~~l~~~l~~~l~~~~~~~~~~~~-~~~~s------------~~v~~v~~--~~g~~~~~v~~~L~~~---g-I~i~~~~ 326 (361)
T TIGR01366 266 TADSSSRLYSWAQERPYATPFVTD-PGKRS------------QVVGTIDF--VDDIDAATVAKILRAN---G-IVDTEPY 326 (361)
T ss_pred HHHHHHHHHHHHHhCCCcccCCCC-hhhcc------------cceEEEEC--CCccCHHHHHHHHHHC---C-CeeccCc
Confidence 88899999999998874 332211 10000 01123444 4222355666666542 3 3332110
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 388 YETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 388 ~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
. .+ ..+.+|||+. ..++.+.++.|.++|+.+.
T Consensus 327 ~---------------------~l--~~~~vRis~~-~~~t~~di~~l~~al~~~~ 358 (361)
T TIGR01366 327 R---------------------KL--GRNQLRVAMF-PAIDPDDVEALTECVDWVV 358 (361)
T ss_pred c---------------------cc--CCCcEEEEcC-CCCCHHHHHHHHHHHHHHH
Confidence 0 01 1357999999 8899999999999998764
No 266
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.76 E-value=1.1e-16 Score=160.95 Aligned_cols=289 Identities=14% Similarity=0.164 Sum_probs=175.9
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc------CC-CEEEEeCCCchhHHHHHHHhCCC-----
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS------SG-GHVVAARTLYGGTHALLTHFFPR----- 164 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~------~g-d~Vi~~~~~y~~~~~~~~~~~~~----- 164 (450)
.++...++.+.+++..+.+.++|++| |++|+..+++.+.. +| ++||+.+..||+...........
T Consensus 76 ~~~~~~~la~~l~~~~~~~~v~f~~S---GseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 152 (395)
T PRK03715 76 YNEPMAKLAGLLTQHSCFDKVFFANS---GAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDT 152 (395)
T ss_pred cCHHHHHHHHHHhhccCCCEEEEeCC---cHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCccccc
Confidence 35566777777777666678999999 99999999987641 23 57888888888754322111110
Q ss_pred cc---CeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC----
Q 013079 165 AC---NITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL---- 233 (450)
Q Consensus 165 ~~---g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~---- 233 (450)
.. -..+..++..|++++++.+ .+++++|++|++++..|.+.| +++|.++|+++|+++|+||+|+++..
T Consensus 153 ~~~~~~~~~~~~~~~d~~~l~~~l-~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~ 231 (395)
T PRK03715 153 IFAPQVPGFPKAELNDIASVEKLI-TDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTL 231 (395)
T ss_pred CCCCCCCCceeeCCchHHHHHHHc-CCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcch
Confidence 00 0012223446899999998 778999999999999998877 99999999999999999999965531
Q ss_pred ---CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHH
Q 013079 234 ---SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHC 310 (450)
Q Consensus 234 ---~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~ 310 (450)
....+.+|+++ ++|.+++ |.++ |+++.++++.. +... ....+..|+.+...++...+..++. +...++..
T Consensus 232 ~a~~~~gv~PDi~t--~gK~lg~-G~p~-~av~~~~~i~~-~~~~-~~~~T~~g~pl~~aaala~L~~l~~-~~l~~~~~ 304 (395)
T PRK03715 232 FAYELSGIEPDIMT--LGKGIGG-GVPL-AALLAKAEVAV-FEAG-DQGGTYNGNPLMTAVGVAVISQLLA-PGFLEGVR 304 (395)
T ss_pred hhHhhcCCCCceee--ehhhhhC-Ccce-EEEEEcccccc-ccCC-CcCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHH
Confidence 11223568765 7899995 5777 66677766642 1110 1111223333332223223222221 23445566
Q ss_pred HHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccc
Q 013079 311 HRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYET 390 (450)
Q Consensus 311 ~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s 390 (450)
++.+++.+.|+++..+. + +. +.+|.|.++.+++... ....+...+......|++ +.
T Consensus 305 ~~g~~l~~~L~~l~~~~--~-i~-------------~vrG~Glm~~i~l~~~-~~~~~~~~~~~~~~~Gi~-~~------ 360 (395)
T PRK03715 305 ARGEYLKEKLLELSEER--G-LE-------------GERGEGLLRALLLGKD-IGPQIVEKARDMQPDGLL-LN------ 360 (395)
T ss_pred HHHHHHHHHHHHHhhcC--C-cC-------------eEEcceeEEEEEecCc-hHHHHHHHHHhccCCCEE-Ee------
Confidence 66777777777542111 1 11 1226788999999753 123343333321001211 10
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 391 LMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
......|||++. ...+++.++.+.++|++.
T Consensus 361 ---------------------~~~~~~lR~~p~-l~~t~~ei~~~~~~l~~~ 390 (395)
T PRK03715 361 ---------------------APRPNLLRFMPA-LNVTTEEIDQMIAMLRSV 390 (395)
T ss_pred ---------------------ecCCCEEEEeCC-cccCHHHHHHHHHHHHHH
Confidence 011357999999 867777777776666554
No 267
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.76 E-value=3.9e-16 Score=158.26 Aligned_cols=296 Identities=13% Similarity=0.164 Sum_probs=178.7
Q ss_pred ccCCCChhHHHHHHHHHHHhC---CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCC----
Q 013079 93 YSRHFNPTVLNLSRQMAALEG---TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP---- 163 (450)
Q Consensus 93 y~r~~~~~~~~l~~~iA~l~g---~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~---- 163 (450)
++...++...++.++|+++.. .+.++|++| |+||+..|++... ....+|+.....||+..........
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~s---GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~ 153 (421)
T PRK09792 77 YQIVPYESYVTLAEKINALAPVSGQAKTAFFTT---GAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAP 153 (421)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCceEEEeCC---hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcc
Confidence 334567777889999998864 257899999 9999999998543 2235789999889886432211100
Q ss_pred CccCe-----eEEEeCCC----------CHHHHHHhhh----cCCceEEEEecCCCCccccc-C---HHHHHHHHHhcCC
Q 013079 164 RACNI-----TTTFVDIS----------DHEMVNSAIV----QGRTKVLYFESISNPTLAVA-N---IPELSRLAHDKGV 220 (450)
Q Consensus 164 ~~~g~-----~v~~v~~~----------d~~~l~~ai~----~~~t~lv~i~~~~NptG~v~-~---l~~I~~la~~~gi 220 (450)
...++ .+..++.. +++.+++.+. .+++++|+++.+++++|.+. | +++|.++|+++|+
T Consensus 154 ~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~ 233 (421)
T PRK09792 154 YKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGI 233 (421)
T ss_pred cccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 00111 12333331 3477887773 24688999999999999764 5 8899999999999
Q ss_pred EEEEeCCCCCCCCCc-----cC--CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHH
Q 013079 221 TVVVDNTFSPLVLSP-----AR--LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAF 293 (450)
Q Consensus 221 ~livD~~~~~~~~~~-----~~--~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~ 293 (450)
++|+||+++++.... .. ...|+ .+++|.++ +|.++ |++++++++++.+..... ..+..++.+.+.++.
T Consensus 234 llI~DEv~tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~-~G~pi-gav~~~~~i~~~~~~~~~-~~T~~gnpl~~aaa~ 308 (421)
T PRK09792 234 VMIADEVQSGFARTGKLFAMDHYADKPDL--MTMAKSLA-GGMPL-SGVVGNANIMDAPAPGGL-GGTYAGNPLAVAAAH 308 (421)
T ss_pred EEEEeccccCCCCCCchhHHHhcCCCCcE--EEeehhhc-CCCce-EEEEEcHHHHhccCCCCc-CCCCCCCHHHHHHHH
Confidence 999999986663221 11 24675 45999999 57998 889999888877643222 223445555544444
Q ss_pred HHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-------HHHH
Q 013079 294 ELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-------EKAN 366 (450)
Q Consensus 294 ~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-------~~~~ 366 (450)
..+..++.- ...++.++..+++.+.|+++..+ +|... +.+|.|.++++++++. ....
T Consensus 309 a~l~~l~~~-~~~~~~~~~g~~l~~~l~~l~~~--~p~v~-------------~vrG~Gl~~~ie~~~~~~~~~~~~~~~ 372 (421)
T PRK09792 309 AVLNIIDKE-SLCERANQLGQRLKNTLIDAKES--VPAIA-------------AVRGLGSMIAAEFNDPQTGEPSAAIAQ 372 (421)
T ss_pred HHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHh--CCCcc-------------eecccceEEEEEecCCccCCcchHHHH
Confidence 433322211 12223334444444444432111 11100 2237899999999732 2345
Q ss_pred HHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 367 RLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 367 ~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.+...+.. .|+ .+.. .+...+.|||.+. ..-+++.++.+.+++.+.
T Consensus 373 ~l~~~~~~---~Gv-~i~~-------------------------~g~~~~~irl~P~-l~i~~~ei~~~~~~l~~~ 418 (421)
T PRK09792 373 KIQQRALA---QGL-LLLT-------------------------CGAYGNVIRFLYP-LTIPDAQFDAAMKILQDA 418 (421)
T ss_pred HHHHHHHH---CCc-EEee-------------------------cCCCCCEEEEeCC-CcCCHHHHHHHHHHHHHH
Confidence 56655553 232 2110 0112478999988 655666666666666543
No 268
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.76 E-value=1.6e-15 Score=136.92 Aligned_cols=219 Identities=19% Similarity=0.265 Sum_probs=169.5
Q ss_pred CCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 96 HFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
...|.+..+-+.||+++|.+.+-+|+| +.+|-.+++.+++++||.|++....|..+.-++. ..|.++..||.
T Consensus 58 i~kPpI~~F~~dlaeFlg~D~~R~t~G---ARe~KfavMhal~~~gd~vV~D~~aHYttyvAAE-----ragl~v~eVp~ 129 (382)
T COG1103 58 ITKPPIKDFLEDLAEFLGMDEVRVTAG---AREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAE-----RAGLNVAEVPN 129 (382)
T ss_pred ccCCcHHHHHHHHHHHhCCceeeeccc---chhhHHHHHHHhccCCCEEEEcCcchHHHHHHHH-----hcCCeEEecCC
Confidence 346888999999999999999999999 9999999999999999999999999887776665 26888888875
Q ss_pred C-------CHHHHHHhhh---c---CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCC
Q 013079 176 S-------DHEMVNSAIV---Q---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGA 240 (450)
Q Consensus 176 ~-------d~~~l~~ai~---~---~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~ 240 (450)
. +++...+.|. + ..+.+.+++++...-|.+.|.++++++|+++|+++++..+| +.+..+..+.|+
T Consensus 130 tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~ 209 (382)
T COG1103 130 TGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGA 209 (382)
T ss_pred CCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCC
Confidence 4 5555544441 1 34788899999999999999999999999999999999999 778888889999
Q ss_pred eEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhh-----hhhccCCCchHHHHHHHHccCCcHHHHHHHH---HHH
Q 013079 241 DVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQG-----ALMLLGPTMNPKVAFELSERIPHLGLRMKEH---CHR 312 (450)
Q Consensus 241 di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~-----~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~---~~~ 312 (450)
|++++|.||.++.. .++ |++..+.++.+.+...... -....|.+.-......+.....+..+|+++. .+.
T Consensus 210 DFiVgSGHKsmAAs-~Pi-Gvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~k 287 (382)
T COG1103 210 DFIVGSGHKSMAAS-API-GVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEK 287 (382)
T ss_pred CEEEecCccchhcc-CCe-eEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 99999999999954 456 9998888888776433210 0112333322222222333566666776653 567
Q ss_pred HHHHHHHHHhCC
Q 013079 313 ALIFARRMKKLG 324 (450)
Q Consensus 313 ~~~l~~~L~~~~ 324 (450)
++++.+.|.+++
T Consensus 288 aR~fv~elEkig 299 (382)
T COG1103 288 ARWFVAELEKIG 299 (382)
T ss_pred HHHHHHHHHHhh
Confidence 788999998876
No 269
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=4.2e-16 Score=158.91 Aligned_cols=255 Identities=13% Similarity=0.152 Sum_probs=156.7
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhC---C---Cc
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF---P---RA 165 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~---~---~~ 165 (450)
..++...++.++|+++.. .+.++|++| |+||+..+++... ....+|+.....||+......... . +.
T Consensus 83 ~~~~~~~~la~~L~~~~~~~~~~v~f~~S---GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~ 159 (433)
T PRK08117 83 IYYESILKLAEELAEITPGGLDCFFFSNS---GAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKY 159 (433)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCc---HHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCcccccc
Confidence 356788999999999983 457899999 9999999998532 223578888888888543221000 0 00
Q ss_pred cC---eeEEEeCCC-----------------CHHHHHHhhh----cCCceEEEEecCCCCcccccC----HHHHHHHHHh
Q 013079 166 CN---ITTTFVDIS-----------------DHEMVNSAIV----QGRTKVLYFESISNPTLAVAN----IPELSRLAHD 217 (450)
Q Consensus 166 ~g---~~v~~v~~~-----------------d~~~l~~ai~----~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~ 217 (450)
.+ ..+.+++.. +++++++.+. .+++.+|++|.+....|.+.+ +++|.++|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~ 239 (433)
T PRK08117 160 YQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDR 239 (433)
T ss_pred CCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHH
Confidence 00 012222221 4555666652 246889999999999999988 9999999999
Q ss_pred cCCEEEEeCCCCCCCCCc-----cCCC--CeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHH
Q 013079 218 KGVTVVVDNTFSPLVLSP-----ARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK 290 (450)
Q Consensus 218 ~gi~livD~~~~~~~~~~-----~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~ 290 (450)
||+++|+||+|+++.... ..++ .|+ .+++|.++ .|.++ |++++++++++.+..... ..+..++.+.+.
T Consensus 240 ~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi--~t~sK~lg-~G~pi-gav~~~~~i~~~~~~~~~-~~T~~~np~~~a 314 (433)
T PRK08117 240 HGILLIFDEVQTGFGRTGEWFAAQTFGVVPDI--MTIAKGIA-SGLPL-SAVVASKELMEQWPLGSH-GTTFGGNPVACA 314 (433)
T ss_pred cCCEEEEecchhccCccccchhHhhcCCCCCE--eehhhhcc-CCCcc-eeEEEcHHHHhhccCCCC-CCCCCcCHHHHH
Confidence 999999999996553211 1223 455 57999999 67998 888888888876643222 222334444433
Q ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC------CHHH
Q 013079 291 VAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME------TEEK 364 (450)
Q Consensus 291 ~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~------~~~~ 364 (450)
++...+..++. ....++..++.+++.+.|+++..+ +|... +.+|.|.++.+++. ....
T Consensus 315 aa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~~~-------------~vrg~Gl~~gi~~~~~~~~~~~~~ 378 (433)
T PRK08117 315 AALATLEVIKE-EKLLDNANEMGAYALERLEVLKEK--HPVIG-------------DVRGIGLMIGIEIVDPDGEPDGDA 378 (433)
T ss_pred HHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc--CCcee-------------eeecCCcEEEEEEecCCCCcchHH
Confidence 44333332211 123344455566666666653211 11100 22367889999984 2223
Q ss_pred HHHHHHHhhc
Q 013079 365 ANRLMNYLQN 374 (450)
Q Consensus 365 ~~~~~~~l~~ 374 (450)
...+...+..
T Consensus 379 ~~~~~~~l~~ 388 (433)
T PRK08117 379 VEKILDKCLE 388 (433)
T ss_pred HHHHHHHHHH
Confidence 4455555543
No 270
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.75 E-value=4.5e-18 Score=162.66 Aligned_cols=225 Identities=22% Similarity=0.198 Sum_probs=159.1
Q ss_pred cccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEE
Q 013079 92 IYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTT 171 (450)
Q Consensus 92 ~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~ 171 (450)
.|| .++.++++++++++++|.+.++|+++ ||.|+.++++.++++++.|++..+.|-...+.-. . ....|.++.
T Consensus 24 ~Yg--~D~~~~~l~~~i~~l~g~e~a~f~~s---GT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga-~-~~~~G~~~~ 96 (290)
T PF01212_consen 24 AYG--EDPTTARLEERIAELFGKEAALFVPS---GTMANQLALRAHLRPGESVICADTAHIHFDETGA-I-EELSGAKLI 96 (290)
T ss_dssp CTT--SSHHHHHHHHHHHHHHTSSEEEEESS---HHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTH-H-HHHTTCEEE
T ss_pred ccC--CChhHHHHHHHHHHHcCCCEEEEeCC---CChHHHHHHHHHHhcCCceeccccceeeeeccch-h-hHhcCcEEE
Confidence 355 58999999999999999999999999 9999999999999999999999887654332210 0 002577777
Q ss_pred EeCCC-----CHHHHHHhhhc-----CCceEEEEecCCCCc-cccc---CHHHHHHHHHhcCCEEEEeCCC-----CCCC
Q 013079 172 FVDIS-----DHEMVNSAIVQ-----GRTKVLYFESISNPT-LAVA---NIPELSRLAHDKGVTVVVDNTF-----SPLV 232 (450)
Q Consensus 172 ~v~~~-----d~~~l~~ai~~-----~~t~lv~i~~~~Npt-G~v~---~l~~I~~la~~~gi~livD~~~-----~~~~ 232 (450)
.++.. |+++|++++.. .++++|+|++++|.. |.+. ++++|.++||++|+++|.|.+- ..+.
T Consensus 97 ~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~ 176 (290)
T PF01212_consen 97 PLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALG 176 (290)
T ss_dssp EEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHH
T ss_pred ECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhccc
Confidence 76543 79999998844 468999999999875 5665 4778999999999999999984 1111
Q ss_pred CCccC--CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCch---HHHH-----HHHHccCCcH
Q 013079 233 LSPAR--LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN---PKVA-----FELSERIPHL 302 (450)
Q Consensus 233 ~~~~~--~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~---~~~a-----~~~~~~~~~l 302 (450)
..+.+ .++|.++.|++|.++.++ |++++.++++++....+++ ..|+.+. ...+ ...+..++..
T Consensus 177 ~~~~e~~~~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k----~~gg~~~~~G~~~a~~~~~~~~l~~l~~~ 249 (290)
T PF01212_consen 177 VSLAEIAAGADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRK----RLGGGMRQAGVLAAAELYQFAALRALELW 249 (290)
T ss_dssp HHHHHHHTTSSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHH----HHTHHHHHTTHHHHHHHHHHHHHCHEECS
T ss_pred ccHHHHhhhCCEEEEEEEccccccc---ceEEEechHHHHHHHHHHH----HhccCeeecceeeeechhhHHHHHHHHhh
Confidence 22222 279999999999999875 6888999997766554444 2222111 1122 1233344444
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 013079 303 GLRMKEHCHRALIFARRMKKLGLKVLYP 330 (450)
Q Consensus 303 ~~~~~~~~~~~~~l~~~L~~~~~~v~~p 330 (450)
..+..+..+++++|.+.|+..+..+..|
T Consensus 250 ~~~~~~~~~~A~~La~~l~~~~~~~~~~ 277 (290)
T PF01212_consen 250 LERARHANAMAKRLAAGLEALGGVLPRP 277 (290)
T ss_dssp HHHHHCHHHHHHCHHHCHHEECEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 5666777888899999998887755444
No 271
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.74 E-value=2e-15 Score=153.52 Aligned_cols=196 Identities=12% Similarity=0.149 Sum_probs=128.6
Q ss_pred CCChhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCCC----cc
Q 013079 96 HFNPTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPR----AC 166 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~----~~ 166 (450)
..++...++.+.+++..+. +.++|++| |++|+..+++... ....+|++.++.|++....+...... ..
T Consensus 81 ~~~~~~~~la~~l~~~~~~~~~~~~~f~~s---Gsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~ 157 (425)
T PRK08088 81 LAYEPYLELCEKMNQKVPGDFAKKTLLVTT---GSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSA 157 (425)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCC---cHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCcccc
Confidence 3456677888888887653 57899999 9999999987542 23456888899999876544322110 01
Q ss_pred C-------eeEEEeCCC--------CHHHHHHhhh----cCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEE
Q 013079 167 N-------ITTTFVDIS--------DHEMVNSAIV----QGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVV 223 (450)
Q Consensus 167 g-------~~v~~v~~~--------d~~~l~~ai~----~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~li 223 (450)
| +....++.+ +++++++++. .++.++|++|.+.+..|.+.+ +++|.++|+++|+++|
T Consensus 158 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI 237 (425)
T PRK08088 158 GMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLI 237 (425)
T ss_pred CCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 1 111111111 1556887773 256789999988776676655 8999999999999999
Q ss_pred EeCCCCCCCCCc--c---CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHc
Q 013079 224 VDNTFSPLVLSP--A---RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE 297 (450)
Q Consensus 224 vD~~~~~~~~~~--~---~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~ 297 (450)
+||+|+++.... . ..+.+.-+.|++|.++ +|+|+ ||+++++++++.+..... ..+..++.+.+.++...+.
T Consensus 238 ~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G~ri-g~v~~~~~~~~~~~~~~~-~~t~~~~~~~~~a~~~~l~ 313 (425)
T PRK08088 238 ADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIA-GGFPL-AGVTGRAEVMDAIAPGGL-GGTYAGNPIACAAALAVLK 313 (425)
T ss_pred EeccccCCCcCcchhHHhhcCCCCCEEEEecccc-CCCcc-eeeEecHHHHhhcCCCCC-CCCCCcCHHHHHHHHHHHH
Confidence 999996553221 1 2244444678999999 68998 999999999887754332 2223344444444444433
No 272
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=1.2e-15 Score=155.24 Aligned_cols=240 Identities=17% Similarity=0.202 Sum_probs=149.2
Q ss_pred CChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCC------Ccc
Q 013079 97 FNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP------RAC 166 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~------~~~ 166 (450)
.++...++.+.|+++.+. +.++|++| |+||+..|++... ....+|+.....||+.......... ..+
T Consensus 82 ~~~~~~~la~~L~~~~p~~~~~v~f~~s---GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~ 158 (443)
T PRK08360 82 FPVEPLLLAEKLIEIAPGDNPKVSFGLS---GSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALV 158 (443)
T ss_pred CcHHHHHHHHHHHHhCCCCCCEEEEcCC---HHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCC
Confidence 466778889999998754 57899999 9999999998542 2235788888888875422111100 001
Q ss_pred C--eeEEEeCCC-----------------CHHHHHHhhh----cCCceEEEEecCCCCcccccC----HHHHHHHHHhcC
Q 013079 167 N--ITTTFVDIS-----------------DHEMVNSAIV----QGRTKVLYFESISNPTLAVAN----IPELSRLAHDKG 219 (450)
Q Consensus 167 g--~~v~~v~~~-----------------d~~~l~~ai~----~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~g 219 (450)
+ ..+.+++.. +++.+++.+. .+++++|+++..+||+|.+.+ +++|.++|+++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g 238 (443)
T PRK08360 159 GELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHG 238 (443)
T ss_pred CCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 1 112333221 2344555552 257899999999999998865 889999999999
Q ss_pred CEEEEeCCCCCCCCCc-------cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHH
Q 013079 220 VTVVVDNTFSPLVLSP-------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVA 292 (450)
Q Consensus 220 i~livD~~~~~~~~~~-------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a 292 (450)
+++|+||+|+++.... ..+..|++ +++|.++ +|+++ |++++++++++.+..... ..+..++.+.+.++
T Consensus 239 ~llI~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~-~G~pi-gav~~~~~i~~~~~~~~~-~~T~~~~p~~~aaa 313 (443)
T PRK08360 239 ILLVVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLG-GGLPI-SATIGRAEIMDSLPPLAH-AFTLSGNPVASAAA 313 (443)
T ss_pred CEEEEeccccCCCcCccchhhhhcCCCCCEE--Eeccccc-CCcee-EEEEEcHHHHhhhcCCCC-CCCCCcCHHHHHHH
Confidence 9999999996553211 12245766 4799999 68998 889999888887753322 22233444444444
Q ss_pred HHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 293 FELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 293 ~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
...+..++.. ...++..++.+++.+.|+++..+ +|... +.+|.|.++.++|.
T Consensus 314 ~a~l~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~--~~~v~-------------~vrg~Gl~~gie~~ 365 (443)
T PRK08360 314 LAVIEEIEEK-NLLKRAEKLGNYTKKRLEEMKKK--HELIG-------------DVRGIGLMIGVDLV 365 (443)
T ss_pred HHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHh--CCCee-------------eeeccceEEEEEEe
Confidence 3333332211 22344455555666666543111 11100 22368889999885
No 273
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.74 E-value=7.9e-16 Score=155.95 Aligned_cols=294 Identities=16% Similarity=0.172 Sum_probs=184.9
Q ss_pred CCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhcc----CC-CEEEEeCCCchhHHHHHHHhC-----C
Q 013079 96 HFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCS----SG-GHVVAARTLYGGTHALLTHFF-----P 163 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~----~g-d~Vi~~~~~y~~~~~~~~~~~-----~ 163 (450)
..++...++.++|+++... +.++|++| |+||+.+|++.... .| .+||+....||+......... .
T Consensus 114 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~S---GsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~ 190 (442)
T TIGR03372 114 LLDPLRALLAKTLAALTPGKLKYSFFCNS---GTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFR 190 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCC---chHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccC
Confidence 3477788899999998753 56899999 99999999985421 23 579999998988653321110 0
Q ss_pred Ccc---CeeEEEeCCCCHHHHHHhhhc-----CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCC
Q 013079 164 RAC---NITTTFVDISDHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPL 231 (450)
Q Consensus 164 ~~~---g~~v~~v~~~d~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~ 231 (450)
..+ ...+..++.+|.+.+++.++. +++.+|++|++....|.+.| +++|.++|+++|+++|+||+++++
T Consensus 191 ~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~ 270 (442)
T TIGR03372 191 KPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGM 270 (442)
T ss_pred CCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCC
Confidence 001 123456677788888777731 46889999999999998887 999999999999999999999555
Q ss_pred CC-------CccCCCCeEEEeCCCCccccCc-cceEEEEEcCHHHHHHHHHHh-hhhhhccCCCchHHHHHHHHccCCcH
Q 013079 232 VL-------SPARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDLH-QGALMLLGPTMNPKVAFELSERIPHL 302 (450)
Q Consensus 232 ~~-------~~~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~~-~~~~~~~g~~~~~~~a~~~~~~~~~l 302 (450)
.. .-..+.+|+++ ++|.+|+ | .++ |.++.++++.+.+.... .+..+..|+.+...++...+..++.
T Consensus 271 GRtG~~~a~e~~gv~PDivt--~gK~lg~-G~~Pi-gavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~- 345 (442)
T TIGR03372 271 GRTGKMFACEHEGVQPDILC--LAKALGG-GVMPI-GATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE- 345 (442)
T ss_pred CccccchhhhhcCCCCCeee--ehhhhcC-Ccccc-eEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh-
Confidence 31 11223478877 9999984 5 467 66777788877763211 1112233333333333333332211
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccc
Q 013079 303 GLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMA 382 (450)
Q Consensus 303 ~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~ 382 (450)
+...++..+..+++.+.|+++..+ +|..- .+.+|.|.++.+++...+....+.+.+.. .|+ .
T Consensus 346 ~~l~~~~~~~G~~l~~~L~~l~~~--~~~~i------------~~vRG~Gl~~giel~~~~~~~~i~~~l~~---~Gv-l 407 (442)
T TIGR03372 346 KNLPAQAAIKGDFLLDGFQQLAAE--YPDLI------------IEARGKGLLMAIEFRDNEIGYAFAKELFQ---QNI-L 407 (442)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHh--CCCce------------EEEecceEEEEEEeCChHHHHHHHHHHHH---CCc-E
Confidence 112233445556666666553211 11000 02237889999999865555667777764 232 2
Q ss_pred cccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Q 013079 383 VSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSR 441 (450)
Q Consensus 383 vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~ 441 (450)
++.. +...+.|||+.. ..-+++.++.+.++|++
T Consensus 408 ~~~~-------------------------~~~~~~lr~~Pp-l~~t~~~id~~~~~l~~ 440 (442)
T TIGR03372 408 VAGT-------------------------LNNAKSIRIEPP-LTITIEQCALVIKAAKD 440 (442)
T ss_pred Eeec-------------------------CCCCCEEEEECC-cccCHHHHHHHHHHHHH
Confidence 2110 011367999999 87777778887777765
No 274
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.74 E-value=1.4e-15 Score=154.68 Aligned_cols=292 Identities=12% Similarity=0.151 Sum_probs=181.0
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhcc-------CC-CEEEEeCCCchhHHHHHHHhCCC-
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHFFPR- 164 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~~~~- 164 (450)
..++...++.++|+++.. .+.++|++| |+||+..|++.... +| .+||.....||+...........
T Consensus 82 ~~~~~~~~la~~l~~~~p~~~~~v~f~~s---GseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~ 158 (423)
T PRK05964 82 FTHEPAERLAQRLVALTPGGLDHVFFSDS---GSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRG 158 (423)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCc
Confidence 456777889999999874 468999999 99999999985421 23 57999999998865433211100
Q ss_pred -----ccC--eeEEEeCC--CC-----HHHHHHhhh--cCCceEEEEec-CCCCcccccC----HHHHHHHHHhcCCEEE
Q 013079 165 -----ACN--ITTTFVDI--SD-----HEMVNSAIV--QGRTKVLYFES-ISNPTLAVAN----IPELSRLAHDKGVTVV 223 (450)
Q Consensus 165 -----~~g--~~v~~v~~--~d-----~~~l~~ai~--~~~t~lv~i~~-~~NptG~v~~----l~~I~~la~~~gi~li 223 (450)
..+ ..+..++. .| ++++++.+. .+++.+|++++ +++..|...+ +++|.++|++||+++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI 238 (423)
T PRK05964 159 GMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLI 238 (423)
T ss_pred cccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 000 11233333 24 778888773 24678899998 6888887754 9999999999999999
Q ss_pred EeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHH---hh--hhhhccCCCchHHH
Q 013079 224 VDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL---HQ--GALMLLGPTMNPKV 291 (450)
Q Consensus 224 vD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~---~~--~~~~~~g~~~~~~~ 291 (450)
+||+++++.. ......+|+++ ++|.+++++.++ |+++.++++.+.+... .. +..+..++.+...+
T Consensus 239 ~DEv~tg~gr~G~~~a~~~~~v~pDi~~--~~K~l~gG~~p~-~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aa 315 (423)
T PRK05964 239 FDEIATGFGRTGTLFACEQAGVSPDIMC--LSKGLTGGYLPL-AATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAA 315 (423)
T ss_pred EechhhCCCcCcchhHHHhcCCCCCeee--eehhhhcCcccc-eEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHH
Confidence 9999855531 11223467765 789998665787 7788898888877431 00 11112233333333
Q ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHH---HHHHH
Q 013079 292 AFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEE---KANRL 368 (450)
Q Consensus 292 a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~---~~~~~ 368 (450)
+...+..++. ....++..++.+++.+.|++... .|.+. +.+|.|.++.|++.+.. ....+
T Consensus 316 a~a~l~~l~~-~~~~~~~~~~g~~l~~~l~~l~~---~~~i~-------------~vrg~Gl~~~i~l~~~~~~~~~~~l 378 (423)
T PRK05964 316 ANASLDLFED-EPVLERVAALSAGLAEGLEPFRD---LPGVA-------------DVRVLGAIGAVELDRPVLERDGPAL 378 (423)
T ss_pred HHHHHHHHHh-cCHHHHHHHHHHHHHHHHHhhcc---CCCeE-------------EeecccEEEEEEeccCcchhHHHHH
Confidence 3333222111 12344556666777777766421 12111 12267889999997432 24566
Q ss_pred HHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 369 MNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 369 ~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
...+.. .|+ .++. ..+.|||+.. ...++++++.+.++|++..
T Consensus 379 ~~~l~~---~Gv-~v~~----------------------------~~~~lR~~p~-l~~t~edId~~v~~l~~al 420 (423)
T PRK05964 379 RAFALE---RGV-LLRP----------------------------LGNTIYLMPP-YIITAEELDRITDAIVEVA 420 (423)
T ss_pred HHHHHH---CCe-EEEe----------------------------cCCEEEEeCC-cccCHHHHHHHHHHHHHHH
Confidence 666654 232 2110 0246999998 7777777777777776543
No 275
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.74 E-value=2.5e-15 Score=152.53 Aligned_cols=192 Identities=12% Similarity=0.151 Sum_probs=128.6
Q ss_pred CCCChhHHHHHHHHHHHhC---CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhC----CCc
Q 013079 95 RHFNPTVLNLSRQMAALEG---TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF----PRA 165 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g---~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~----~~~ 165 (450)
...++...++.++|+++.. .+.++|++| |+||+..|++... ....+|+.....||+......... +..
T Consensus 72 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~s---GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 148 (420)
T TIGR00700 72 VTPYEGYVALAEKLNRIAPGSGPKKSVFFNS---GAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYK 148 (420)
T ss_pred ccCChHHHHHHHHHHHhCCCCCCCEEEEeCC---cHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccc
Confidence 3456777889999999874 257899999 9999999998542 223578888888988643322110 000
Q ss_pred cCe-----eEEEeCCC----------------CHHHHHHhhh----cCCceEEEEecCCCCcccccC----HHHHHHHHH
Q 013079 166 CNI-----TTTFVDIS----------------DHEMVNSAIV----QGRTKVLYFESISNPTLAVAN----IPELSRLAH 216 (450)
Q Consensus 166 ~g~-----~v~~v~~~----------------d~~~l~~ai~----~~~t~lv~i~~~~NptG~v~~----l~~I~~la~ 216 (450)
.++ .+..++.. +++.+++.+. .+++.+|++|.++..+|.+.+ +++|.++|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~ 228 (420)
T TIGR00700 149 SGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCR 228 (420)
T ss_pred cCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 111 12222221 2456666552 257889999999999998865 899999999
Q ss_pred hcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchH
Q 013079 217 DKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNP 289 (450)
Q Consensus 217 ~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~ 289 (450)
+||+++|+||+|+++... ......|+++ ++|.++ +|+++ |++++++++++.+..... ..+..++.+.+
T Consensus 229 ~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~-~G~pi-g~v~~~~~i~~~~~~~~~-~~T~~~~pl~~ 303 (420)
T TIGR00700 229 EHGIVFIADEVQTGFARTGAMFACEHEGPEPDLIT--TAKSLA-DGLPL-SGVTGRAEIMDAPAPGGL-GGTYAGNPLAC 303 (420)
T ss_pred HcCCEEEEEecccCCcccchhHHHhhcCCCCCEEE--eecccc-CCcce-EEEEecHHHHhhcCCCCc-CCCCCcCHHHH
Confidence 999999999999666421 1122467655 999999 78998 999999988877643222 22344444444
Q ss_pred HHHHH
Q 013079 290 KVAFE 294 (450)
Q Consensus 290 ~~a~~ 294 (450)
.++..
T Consensus 304 aaa~a 308 (420)
T TIGR00700 304 AAALA 308 (420)
T ss_pred HHHHH
Confidence 44433
No 276
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.73 E-value=7.6e-16 Score=157.06 Aligned_cols=258 Identities=14% Similarity=0.203 Sum_probs=164.2
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhc--c--CC-CEEEEeCCCchhHHHHHHHhCCC----
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLC--S--SG-GHVVAARTLYGGTHALLTHFFPR---- 164 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~--~--~g-d~Vi~~~~~y~~~~~~~~~~~~~---- 164 (450)
..++...++.++|+++.. .+.++|++| |+||+..|++... . .| .+||+....||+...........
T Consensus 121 ~~~~~~~~lae~L~~~~p~~~~~v~f~~S---GsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~ 197 (459)
T PRK11522 121 LLDPLRAMLAKTLAALTPGKLKYSFFCNS---GTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCC---chHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccc
Confidence 347778889999999864 357899999 9999999998542 1 12 36888888898864332111000
Q ss_pred ----ccCeeEEEeCCCCHHHHHHhhhc-----CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCC
Q 013079 165 ----ACNITTTFVDISDHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPL 231 (450)
Q Consensus 165 ----~~g~~v~~v~~~d~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~ 231 (450)
.....+..++..|.+++++.+.. +++.+|++|++....|.+.| ++++.++|+++|+++|+||+++++
T Consensus 198 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~ 277 (459)
T PRK11522 198 KPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGM 277 (459)
T ss_pred cCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecC
Confidence 00112345566688888887731 45789999999999999877 999999999999999999999555
Q ss_pred CC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh-hhhhhccCCCchHHHHHHHHccCCcHH
Q 013079 232 VL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH-QGALMLLGPTMNPKVAFELSERIPHLG 303 (450)
Q Consensus 232 ~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~-~~~~~~~g~~~~~~~a~~~~~~~~~l~ 303 (450)
.. ......+|+++ ++|.+|+.-.++ |.++.++++.+.+.... .+..+..|+.+...++.+.+..++..
T Consensus 278 GRtG~~~a~e~~gv~PDivt--~gK~lggG~~Pi-gav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~- 353 (459)
T PRK11522 278 GRTGKMFACEHENVQPDILC--LAKALGGGVMPI-GATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ- 353 (459)
T ss_pred CccchhhhhhccCCCCCEEE--echhhhCCCccc-eeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc-
Confidence 31 11223478875 899999532567 66666777776553211 11222333444444444444333321
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 304 LRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 304 ~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
...++..++.++|.+.|+++..+ +|..- .+.+|.|.++.+++...+.+..+...+..
T Consensus 354 ~l~~~~~~~g~~l~~~L~~l~~~--~~~~i------------~~VrG~Gl~~giel~~~~~~~~i~~~l~~ 410 (459)
T PRK11522 354 NLPAQAEQKGDYLLDGFRQLARE--YPDLV------------QEARGKGMLMAIEFVDNEIGYNFASEMFR 410 (459)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh--CCCce------------eeEEeceeEEEEEecCchHHHHHHHHHHH
Confidence 23455566667777777654211 11100 02337889999999865556667776664
No 277
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.73 E-value=1.5e-15 Score=153.47 Aligned_cols=293 Identities=13% Similarity=0.125 Sum_probs=176.9
Q ss_pred CChhHHHHHHHHHHHh--C--C-CeEEE-ecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhC-----C
Q 013079 97 FNPTVLNLSRQMAALE--G--T-EAAYC-TASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF-----P 163 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~--g--~-~~~~~-tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~-----~ 163 (450)
.++...++.++|+++. + . ..++| ++| |+||+..|++... ....+|+.....||+......... .
T Consensus 76 ~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s---GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~ 152 (412)
T TIGR02407 76 ATEAKREFLETFNEIILKPRGLDYKVQFPGPT---GTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKR 152 (412)
T ss_pred CcHHHHHHHHHHHHhccCccCCCceEEEeCCC---chHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccc
Confidence 4677788888888874 1 2 24556 489 9999999998643 223579998989988654332110 1
Q ss_pred CccC---eeEEEeCC--------CCHHHHHHhhhc-----CCceEEEEecCCCCccccc-C---HHHHHHHHHhcCCEEE
Q 013079 164 RACN---ITTTFVDI--------SDHEMVNSAIVQ-----GRTKVLYFESISNPTLAVA-N---IPELSRLAHDKGVTVV 223 (450)
Q Consensus 164 ~~~g---~~v~~v~~--------~d~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~-~---l~~I~~la~~~gi~li 223 (450)
...+ ..+..++. ++++.+++.+.+ +++.+|+++.++++.|.+. | +++|.++|+++|+++|
T Consensus 153 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI 232 (412)
T TIGR02407 153 QGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLI 232 (412)
T ss_pred cCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 1011 12344443 236678877732 4578999999999999864 3 8899999999999999
Q ss_pred EeCCCCCCC-------CCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHH
Q 013079 224 VDNTFSPLV-------LSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELS 296 (450)
Q Consensus 224 vD~~~~~~~-------~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~ 296 (450)
+||+|+++. +....+..|+++ ++|.+++.|.++ |+++.++++ ..+... ....+..++.+...++...+
T Consensus 233 ~DEV~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G~pi-gav~~~~~~-~~~~~~-~~~~T~~gnpl~~aaa~a~l 307 (412)
T TIGR02407 233 VDDIQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGYGLPL-ALTLIKPEL-DVWKPG-EHNGTFRGNNLAFVTATAAL 307 (412)
T ss_pred EechhhCCCccchhHHhcccCCCCCEEE--echhccCCccce-eEEEEchhh-hccCCC-ccCCCCCccHHHHHHHHHHH
Confidence 999996553 222344678776 789999658998 888887765 433211 11112333333333333333
Q ss_pred cc-CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcc
Q 013079 297 ER-IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNY 375 (450)
Q Consensus 297 ~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~ 375 (450)
.. ++. ....++..+..+++.+.|+++... +|.... +.+|.|.+++++++..+....+...+..
T Consensus 308 ~~~i~~-~~l~~~~~~~g~~l~~~l~~l~~~--~~~~~~------------~vrg~Gl~~~l~l~~~~~~~~~~~~~~~- 371 (412)
T TIGR02407 308 EYYWSD-DAFEKAVQRKSEIIQERLDRIVAE--YPELIK------------QVRGRGLMQGIECGDGDLAGKIAKAAFE- 371 (412)
T ss_pred HHHhcc-cHHHHHHHHHHHHHHHHHHHHHhh--CCCceE------------eeecceeEEEEEecChHHHHHHHHHHHH-
Confidence 32 221 122333444555565655532110 010000 1226788999999866556677777664
Q ss_pred ccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 376 AQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 376 ~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.| +.+... +...+.|||+.. ...+++.++.+.+++++.
T Consensus 372 --~G-v~v~~~-------------------------~~~~~~lr~~p~-l~~t~~~i~~~~~~l~~~ 409 (412)
T TIGR02407 372 --NG-LIIETS-------------------------GPNDEVIKLLPP-LTIDEETLQQGLDILEQA 409 (412)
T ss_pred --CC-CEEecc-------------------------CCCCCEEEEECC-CCCCHHHHHHHHHHHHHH
Confidence 23 222110 111367999999 877777777777777654
No 278
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=1.2e-15 Score=154.77 Aligned_cols=242 Identities=13% Similarity=0.145 Sum_probs=154.8
Q ss_pred CCCChhHHHHHHHHHHHhC---CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCC----Cc
Q 013079 95 RHFNPTVLNLSRQMAALEG---TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP----RA 165 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g---~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~----~~ 165 (450)
...++...++.++|+++.. .+.++|++| |+||+..|++... ....+|+.....||+.......... ..
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~~~f~~s---GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~ 155 (421)
T PRK06777 79 IVPYASYVTLAERINALAPIDGPAKTAFFTT---GAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYK 155 (421)
T ss_pred ccCChHHHHHHHHHHHhCCCCCCceEEEeCC---cHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccc
Confidence 3456777888899998864 367899999 9999999998542 2235788888889887543321100 00
Q ss_pred cCe-----eEEEeCCC----------CHHHHHHhhh----cCCceEEEEecCCCCcccc-cC---HHHHHHHHHhcCCEE
Q 013079 166 CNI-----TTTFVDIS----------DHEMVNSAIV----QGRTKVLYFESISNPTLAV-AN---IPELSRLAHDKGVTV 222 (450)
Q Consensus 166 ~g~-----~v~~v~~~----------d~~~l~~ai~----~~~t~lv~i~~~~NptG~v-~~---l~~I~~la~~~gi~l 222 (450)
.+. .+..++.. +++.+++.+. .+++.+|++|.++++.|.. .| +++|.++|+++|+++
T Consensus 156 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~ll 235 (421)
T PRK06777 156 VGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILL 235 (421)
T ss_pred cCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 010 11222211 2566777663 2467899999999998864 44 899999999999999
Q ss_pred EEeCCCCCCCCCc-----cCC--CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHH
Q 013079 223 VVDNTFSPLVLSP-----ARL--GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFEL 295 (450)
Q Consensus 223 ivD~~~~~~~~~~-----~~~--g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~ 295 (450)
|+||+|+++.... ..+ ..|++ +++|.++ +|+++ |++++++++++.+..... ..+..++.+.+.++...
T Consensus 236 I~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~-~G~pi-gav~~~~~i~~~~~~~~~-~~T~~~~p~~~aaa~a~ 310 (421)
T PRK06777 236 IADEVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLG-GGMPI-SAVVGRAEVMDAPAPGGL-GGTYAGNPLAVAAALAV 310 (421)
T ss_pred EEechhhCCccCCchhhhhhcCCCCCEE--eeehhhc-CCCce-EEEEEcHHHHhccCCCCC-CCCCCcCHHHHHHHHHH
Confidence 9999996553211 112 36766 5999999 68998 899999888877653322 22344444444444444
Q ss_pred HccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 296 SERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 296 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+..++. +...++.+++.+++.+.|+++..+ +|... ..+|.|.++.+++.
T Consensus 311 L~~~~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~i~-------------~vrg~G~~~~i~~~ 359 (421)
T PRK06777 311 LDVIAE-EKLCQRALILGAHLVEVLEKAKAS--CPAIV-------------DIRARGSMVAVEFN 359 (421)
T ss_pred HHHHHh-ccHHHHHHHHHHHHHHHHHHHHHh--CCCeE-------------EecCceEEEEEEEe
Confidence 433222 234556677777888888764211 11100 12367888888774
No 279
>PLN02271 serine hydroxymethyltransferase
Probab=99.73 E-value=5.6e-15 Score=149.37 Aligned_cols=282 Identities=17% Similarity=0.163 Sum_probs=176.7
Q ss_pred cccccCccccCCH-HHHHHhhcCCCCCCCCCccccC--CCChhHHHH----HHHHHHHhCCCe----E-EEecChHHHHH
Q 013079 61 SIEASATFTVMEP-ETMRRMFAGELGPDRDFFIYSR--HFNPTVLNL----SRQMAALEGTEA----A-YCTASDKAGMS 128 (450)
Q Consensus 61 pi~~att~~~~~~-~~~~~~~~~~~~n~~~~~~y~r--~~~~~~~~l----~~~iA~l~g~~~----~-~~tsg~~~gt~ 128 (450)
.+.+|..++.+.+ +.+-..+...|.. +|.-.| .+...++++ .++..+++|++. + +---| |+.
T Consensus 152 ~LIASEN~~S~av~~algS~ltnkYaE---G~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~S---Gs~ 225 (586)
T PLN02271 152 ELIASENFVCRAVMEALGSHLTNKYSE---GMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYS---CTS 225 (586)
T ss_pred eeccccccCCHHHHHHhcCcccccCCC---CCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeecc---HHH
Confidence 4556777766553 4444444444321 221112 133444433 345555778654 2 33347 999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCchhHHHHHHH-----hCCCccCee--EEEeCCC------CHHHHHHhhhcCCceEEEE
Q 013079 129 AISSVLMQLCSSGGHVVAARTLYGGTHALLTH-----FFPRACNIT--TTFVDIS------DHEMVNSAIVQGRTKVLYF 195 (450)
Q Consensus 129 ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~-----~~~~~~g~~--v~~v~~~------d~~~l~~ai~~~~t~lv~i 195 (450)
|+.+++.++++|||+|+..+..|++....... ... ..|+. +..++.+ |.+++++.+...++++|++
T Consensus 226 AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs-~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~ 304 (586)
T PLN02271 226 ANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVS-GASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC 304 (586)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccc-cccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEE
Confidence 99999999999999999999999887665310 011 13543 3332232 8999998443789999999
Q ss_pred ecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCC-----CCccCCCCeEEEeCCCCccccCccceEEEEEcCHH--
Q 013079 196 ESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLV-----LSPARLGADVVVHSISKFISGGADIIAGAVCGPAN-- 267 (450)
Q Consensus 196 ~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~-----~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~-- 267 (450)
....+| ...|+++|.++|+++|+++++|.+| .++. .+|.. ++|++++|.||++.+|- ||+++.+++
T Consensus 305 g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~aDvvt~TTHKtLrGPr---GG~I~~r~~~~ 378 (586)
T PLN02271 305 GGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-YCDIVTSTTHKSLRGPR---GGIIFYRKGPK 378 (586)
T ss_pred Cchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-CCcEEEeCCcccCCCCC---ceEEEeccccc
Confidence 887887 6789999999999999999999998 3332 13443 59999999999997664 466654432
Q ss_pred ------------------HHHHHHHHhhhhhhccCCCchHHHHHH-HHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCCe
Q 013079 268 ------------------LVNSMMDLHQGALMLLGPTMNPKVAFE-LSE--RIPHLGLRMKEHCHRALIFARRMKKLGLK 326 (450)
Q Consensus 268 ------------------~~~~l~~~~~~~~~~~g~~~~~~~a~~-~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 326 (450)
+.+++....-. ....|+.....++.+ ++. ....+....++..+|++.|++.|.+.|++
T Consensus 379 ~~~~g~~gs~s~~~~~~d~~~kI~~aVfP-glqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~ 457 (586)
T PLN02271 379 LRKQGMLLSHGDDNSHYDFEEKINFAVFP-SLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCR 457 (586)
T ss_pred ccccCCccccccccccHHHHHHhhcccCC-ccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 33333322111 112222333322222 111 22345667777899999999999999998
Q ss_pred eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC----CHHHHHHHHHHhhc
Q 013079 327 VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME----TEEKANRLMNYLQN 374 (450)
Q Consensus 327 v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~----~~~~~~~~~~~l~~ 374 (450)
+..-+..+ .++.+++. +...+++.++...+
T Consensus 458 vv~ggTdn------------------HlvLvDl~~~g~~G~~ae~~Le~~~I 491 (586)
T PLN02271 458 LVTGGTDN------------------HLLLWDLTTLGLTGKNYEKVCEMCHI 491 (586)
T ss_pred EeeCCCCc------------------ceeeecCcccCCCHHHHHHHHHHcCe
Confidence 76544222 26777775 34556666666553
No 280
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=2e-15 Score=154.44 Aligned_cols=259 Identities=17% Similarity=0.123 Sum_probs=155.5
Q ss_pred cccccCccccCCH-HHHHHhhcCCCCCCCCC-ccccCCCChhHHHHHH----HHHHHhCCCe-EEEe----cChHHHHHH
Q 013079 61 SIEASATFTVMEP-ETMRRMFAGELGPDRDF-FIYSRHFNPTVLNLSR----QMAALEGTEA-AYCT----ASDKAGMSA 129 (450)
Q Consensus 61 pi~~att~~~~~~-~~~~~~~~~~~~n~~~~-~~y~r~~~~~~~~l~~----~iA~l~g~~~-~~~t----sg~~~gt~a 129 (450)
.+.+|..++.+.+ +++...+...|+.-..+ -.|+ +....+++++ +..++++++. .+.+ .| |+.|
T Consensus 38 ~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~--G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~S---G~~A 112 (475)
T PLN03226 38 ELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYG--GNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLS---GSPA 112 (475)
T ss_pred eEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcC--CChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCc---hHHH
Confidence 4677888887764 77777775555432211 1222 2345555554 4566677654 3323 77 9999
Q ss_pred HHHHHHHhccCCCEEEEeCCCchhHHHHHHHh-CCCc--cCee--EEEeCCC------CHHHHHHhhhcCCceEEEEecC
Q 013079 130 ISSVLMQLCSSGGHVVAARTLYGGTHALLTHF-FPRA--CNIT--TTFVDIS------DHEMVNSAIVQGRTKVLYFESI 198 (450)
Q Consensus 130 i~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~-~~~~--~g~~--v~~v~~~------d~~~l~~ai~~~~t~lv~i~~~ 198 (450)
|..++.+++++||+|+..+...++........ ..+. .+.. +..+..+ |+++|++.+...++++|++. .
T Consensus 113 N~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~ 191 (475)
T PLN03226 113 NFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-A 191 (475)
T ss_pred HHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-c
Confidence 99999999999999998554333332211000 0010 1211 1122223 99999998844577777652 2
Q ss_pred CCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCC-CC----CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHH--
Q 013079 199 SNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPL-VL----SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVN-- 270 (450)
Q Consensus 199 ~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~-~~----~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~-- 270 (450)
++ ++...|+++|.++|+++|+++++|++| .++ .. +|.. ++|++++|+||++.+|. ||+++++++..+
T Consensus 192 S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~~~~~~~~ 266 (475)
T PLN03226 192 SA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-YCDVVTTTTHKSLRGPR---GGMIFFRKGPKPPK 266 (475)
T ss_pred Cc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC-CCeEEEecCcccccCCC---ceEEEEchhhcccc
Confidence 33 678899999999999999999999998 333 22 2322 69999999999995443 477777665431
Q ss_pred ------------HHHHHhhhhhhccCCCchHHHHHH-HHccC--CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013079 271 ------------SMMDLHQGALMLLGPTMNPKVAFE-LSERI--PHLGLRMKEHCHRALIFARRMKKLGLKVLYPG 331 (450)
Q Consensus 271 ------------~l~~~~~~~~~~~g~~~~~~~a~~-~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 331 (450)
.+...+. .....++.+...++.. ++..+ .......++..++.++|.+.|++.|+++..++
T Consensus 267 ~~g~~~~~d~~~~i~~a~~-~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~ 341 (475)
T PLN03226 267 GQGEGAVYDYEDKINFAVF-PGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGG 341 (475)
T ss_pred cCCCccHHHHHHHhccccC-CccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC
Confidence 1111111 0111222222222221 22222 22445567788999999999999888776554
No 281
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.72 E-value=2e-15 Score=150.06 Aligned_cols=251 Identities=16% Similarity=0.201 Sum_probs=159.0
Q ss_pred hhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhC----CC-----
Q 013079 99 PTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF----PR----- 164 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~----~~----- 164 (450)
+...++.++|.++... +.++|++| |++|+.+|++... ..+..||.....||+.......+- ++
T Consensus 99 e~~v~~ae~L~~~~p~~~~~~~~f~~s---GaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~ 175 (447)
T COG0160 99 EPYVELAEKLTALAPGSGLKKVFFGNS---GAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFG 175 (447)
T ss_pred hhHHHHHHHHHHhCCcccCCeEEecCC---cHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCC
Confidence 5667788888887653 55899999 9999999998542 223578988888887543321110 00
Q ss_pred ccCeeEEEeCCC-----------------CHHHHHHhhhc-----CCceEEEEecCCCCcccccC----HHHHHHHHHhc
Q 013079 165 ACNITTTFVDIS-----------------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN----IPELSRLAHDK 218 (450)
Q Consensus 165 ~~g~~v~~v~~~-----------------d~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~ 218 (450)
.+...+..+|.+ ..+.+++++.. .++.++++|+++.+.|.+.+ ++++.++|++|
T Consensus 176 ~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~ 255 (447)
T COG0160 176 PLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH 255 (447)
T ss_pred CCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 011224444432 12334444422 35789999999999999865 88999999999
Q ss_pred CCEEEEeCCCCCCCCC-----c--cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHH
Q 013079 219 GVTVVVDNTFSPLVLS-----P--ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKV 291 (450)
Q Consensus 219 gi~livD~~~~~~~~~-----~--~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~ 291 (450)
|+++|+||+|+++... . .....|+++ ++|.+|+ |.++ |.++.++++.+....... .++.|+.+...+
T Consensus 256 gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ig~-G~Pl-~avv~r~ei~~~~~g~~~--~Tf~GNpva~Aa 329 (447)
T COG0160 256 GILLIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKSLGG-GLPL-SAVVGRAEIMDWPPGGHG--GTFGGNPVACAA 329 (447)
T ss_pred CCEEEEeccccCCCccccchhhhhcCCCCCEEE--ecccccC-CCce-eEEeccHHhcccCCcccC--CCCCcCHHHHHH
Confidence 9999999999666422 1 222478888 9999996 9998 888888888773222222 224455554444
Q ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--------HH
Q 013079 292 AFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--------EE 363 (450)
Q Consensus 292 a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--------~~ 363 (450)
+.+.+.-++.. ...++..+.-+++.++|.++..+ +|.+. +.+|.|.++.+++.. .+
T Consensus 330 a~AvL~vie~e-~L~~~a~~~G~~l~~~L~~l~~~--~~~Ig-------------dVRG~Glm~giE~v~d~~t~~p~~~ 393 (447)
T COG0160 330 ALAVLDVIEEE-NLLERAAELGEYLRDRLEELQEK--HPLIG-------------DVRGLGLMIGVELVKDRDTKEPDAE 393 (447)
T ss_pred HHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHhh--cCcee-------------cccccceEEEEEEecCCCCCCCCHH
Confidence 44443322221 23344455556666666654221 12111 445899999999862 24
Q ss_pred HHHHHHHHhhc
Q 013079 364 KANRLMNYLQN 374 (450)
Q Consensus 364 ~~~~~~~~l~~ 374 (450)
...++++.+..
T Consensus 394 ~~~~i~~~~~~ 404 (447)
T COG0160 394 LAAKIVARAFE 404 (447)
T ss_pred HHHHHHHHHHH
Confidence 56667776664
No 282
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.72 E-value=3.5e-15 Score=151.55 Aligned_cols=299 Identities=15% Similarity=0.134 Sum_probs=176.9
Q ss_pred CChhHHHHHHHHHHHhC----CC-eEEEe-cChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHh-----CC
Q 013079 97 FNPTVLNLSRQMAALEG----TE-AAYCT-ASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHF-----FP 163 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g----~~-~~~~t-sg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~-----~~ 163 (450)
.++...++.++|++++. .+ .++|+ +| |+||+..|++... ....+||+....||+........ ..
T Consensus 80 ~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s---GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~ 156 (425)
T PRK09264 80 HTTAKREFLETFEETILKPRGLDYKVQFTGPT---GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKR 156 (425)
T ss_pred CcHHHHHHHHHHHHhhcCCcCCCceEEEeCCC---HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccc
Confidence 45677888888888642 22 45564 79 9999999998542 22357888888898864322111 00
Q ss_pred CccC---eeEEEeCC--------CCHHHHHHhhhc-----CCceEEEEecCCCCccccc----CHHHHHHHHHhcCCEEE
Q 013079 164 RACN---ITTTFVDI--------SDHEMVNSAIVQ-----GRTKVLYFESISNPTLAVA----NIPELSRLAHDKGVTVV 223 (450)
Q Consensus 164 ~~~g---~~v~~v~~--------~d~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~----~l~~I~~la~~~gi~li 223 (450)
...+ ..+..++. .|++++++.+.+ +++.+|++|.+....|.+. .+++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (425)
T PRK09264 157 QGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLI 236 (425)
T ss_pred cCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEE
Confidence 0011 12344444 267788887732 3578999999998888754 49999999999999999
Q ss_pred EeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHH
Q 013079 224 VDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELS 296 (450)
Q Consensus 224 vD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~ 296 (450)
+||+++++.. ....+..|+++ ++|.+++.|.++ |+++.++++ ..+.... ...+..++.++..++...+
T Consensus 237 ~DEV~tG~GrtG~~~~~~~~~v~PDi~t--~~K~l~~~G~pi-gav~~~~~i-~~~~~~~-~~~T~~gnp~~~aaa~a~l 311 (425)
T PRK09264 237 VDDIQAGCGRTGTFFSFERAGITPDIVT--LSKSISGYGLPM-ALVLIKPEL-DVWKPGE-HNGTFRGNNLAFVTATAAL 311 (425)
T ss_pred EechhhCCccccHHHHHhhcCCCCCEEE--eccccCCCccce-EEEEEchhh-hccCCCc-cCCCCCCCHHHHHHHHHHH
Confidence 9999965531 22234568765 689999768888 888877765 3332111 1122334433333332333
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccc
Q 013079 297 ERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYA 376 (450)
Q Consensus 297 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~ 376 (450)
.....-....++..++.+++.+.|+++..+ +|.... +.+|.|.+++++++.......+...+..
T Consensus 312 ~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~--~~~~~~------------~vrg~Gl~~~i~l~~~~~~~~l~~~~~~-- 375 (425)
T PRK09264 312 EEYWSDDAFEKEVKAKGELVRERLEEIAAK--YPGLGA------------EVRGRGMMQGIDFGDGELAGKIAAEAFE-- 375 (425)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHh--CCCcee------------cceecccEEEEEecChHHHHHHHHHHHH--
Confidence 111111123344556666777766553111 111000 1226788999999866556677776654
Q ss_pred cccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC----CCHHHHHHHHHHHHHHhhhcCC
Q 013079 377 QFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL----GTLDQRWSQFEKALSRMQDSGV 447 (450)
Q Consensus 377 ~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~----~~~~~~i~~l~~al~~~~~~~~ 447 (450)
.|+ .+... +.....|||+.. . +++++.++.|.+++.++.++..
T Consensus 376 -~Gv-~~~~~-------------------------~~~~~~lr~~p~-l~~t~~ei~~~~~~l~~~l~~~~~~~~ 422 (425)
T PRK09264 376 -NGL-IIETS-------------------------GPEDEVVKLLPP-LTIDEEELEEGLDILEEAVAEVLAEEE 422 (425)
T ss_pred -CCC-EEecc-------------------------CCCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHHhccc
Confidence 231 11110 111357899866 4 4555566666777766654443
No 283
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.71 E-value=6.4e-15 Score=139.54 Aligned_cols=325 Identities=15% Similarity=0.166 Sum_probs=206.8
Q ss_pred cccccCccccCC-----HHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHH
Q 013079 61 SIEASATFTVME-----PETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLM 135 (450)
Q Consensus 61 pi~~att~~~~~-----~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~ 135 (450)
.+..|..|.-.+ .++|.+.++.+-+...+.-..+ ..+....+|++.||++.+.+.+++++| +--|+...+.
T Consensus 174 tVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIs-G~s~~hv~LE~eLA~LHqK~aALlFsS---CfVANDstLf 249 (570)
T KOG1360|consen 174 TVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNIS-GHSKHHVRLEAELADLHQKEAALLFSS---CFVANDSTLF 249 (570)
T ss_pred EEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccC-CCCchhhhHHHHHHHHhcCcceeeeee---eeeccchHHH
Confidence 345555555443 3666666654422111111111 234556789999999999999888888 8888888887
Q ss_pred Hhcc--CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhc---CCceEEEEecCCCCcccccCHHH
Q 013079 136 QLCS--SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPE 210 (450)
Q Consensus 136 ~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~l~~ 210 (450)
.|.+ ||-+|....-.|-+...-++ ..+++-.....+|++.|++.++. .-+|+|.+|++++.+|.+.|++|
T Consensus 250 tLak~lpgcei~SD~gNHASMI~GIr-----ns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcplee 324 (570)
T KOG1360|consen 250 TLAKKLPGCEIFSDEGNHASMIQGIR-----NSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEE 324 (570)
T ss_pred HHHHHCCCcEEeccccchHHHHHHhh-----hcCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHH
Confidence 7643 56555555555555554443 13444444456799999998853 24789999999999999999999
Q ss_pred HHHHHHhcCCEEEEeCCC-CCCCC---------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhh
Q 013079 211 LSRLAHDKGVTVVVDNTF-SPLVL---------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL 280 (450)
Q Consensus 211 I~~la~~~gi~livD~~~-~~~~~---------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~ 280 (450)
|++++++||.+-.+||++ -++.. +......|++++++.|.||. +|||+.....+++.++.+..+..
T Consensus 325 lcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc----VGGYIAat~~LvDmiRSyAaGFI 400 (570)
T KOG1360|consen 325 LCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC----VGGYIAATRKLVDMIRSYAAGFI 400 (570)
T ss_pred HHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc----ccceehhhhhHHHHHHHhcCceE
Confidence 999999999999999997 22221 11122579999999999996 46999999999999988877553
Q ss_pred hccCCCchH-HHHHHHHccCCcH--HHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEE
Q 013079 281 MLLGPTMNP-KVAFELSERIPHL--GLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCL 357 (450)
Q Consensus 281 ~~~g~~~~~-~~a~~~~~~~~~l--~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~ 357 (450)
..+...+.. ..|..+.+.++.- ....+.++++..++.+.|.+.|+.|.. .|. .++-+
T Consensus 401 FTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~-----~pS---------------HIiPv 460 (570)
T KOG1360|consen 401 FTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIP-----NPS---------------HIIPV 460 (570)
T ss_pred EecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccC-----CCc---------------ceeee
Confidence 222222221 1222222222222 223344677888999999998875532 122 28888
Q ss_pred EeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 013079 358 DMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEK 437 (450)
Q Consensus 358 ~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~ 437 (450)
.+.+...+....+.|-. .++ |+|- .+..|... .....+||... ...+.+..+.|.+
T Consensus 461 ~vgda~l~~~~sd~Li~--~h~-iYvQ------aINyPTV~--------------rG~E~LRiaPT-P~HT~~mm~~lv~ 516 (570)
T KOG1360|consen 461 RVGDAALAKQASDILIS--KHN-IYVQ------AINYPTVA--------------RGTERLRIAPT-PHHTPQMMNILVN 516 (570)
T ss_pred eccCHHHHHHHHHHHHH--hcC-eEEE------eccCCccc--------------ccceeeecCCC-CCCCHHHHHHHHH
Confidence 88766555555554432 122 2321 12222221 12467999888 7777777777777
Q ss_pred HHHHh
Q 013079 438 ALSRM 442 (450)
Q Consensus 438 al~~~ 442 (450)
+|..+
T Consensus 517 ~l~~v 521 (570)
T KOG1360|consen 517 ALLDV 521 (570)
T ss_pred HHHHH
Confidence 66543
No 284
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.70 E-value=4.4e-15 Score=152.93 Aligned_cols=241 Identities=13% Similarity=0.155 Sum_probs=149.4
Q ss_pred CChhHHHHHHHHHHHhC-C--CeEEEecChHHHHHHHHHHHHHhc-------cCC-CEEEEeCCCchhHHHHHHHhCC--
Q 013079 97 FNPTVLNLSRQMAALEG-T--EAAYCTASDKAGMSAISSVLMQLC-------SSG-GHVVAARTLYGGTHALLTHFFP-- 163 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g-~--~~~~~tsg~~~gt~ai~~al~~l~-------~~g-d~Vi~~~~~y~~~~~~~~~~~~-- 163 (450)
.++...++.++|.+++. . +.++|++| |+||+..|++... .++ ++||.....||+..........
T Consensus 131 ~~~~~~~lae~L~~~~~~~~~~~v~f~~S---GsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~ 207 (504)
T PLN02760 131 TTKPSLDLAKELLEMFTARKMGKVFFTNS---GSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLP 207 (504)
T ss_pred CcHHHHHHHHHHHhhcCCCCCCEEEEeCC---hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCCh
Confidence 46677889999888853 2 46899999 9999999998652 122 5788888888886432211000
Q ss_pred ---CccCe---eEEEeCCC----------C--------HHHHHHhhh---cCCceEEEEecCCCCcccccC----HHHHH
Q 013079 164 ---RACNI---TTTFVDIS----------D--------HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELS 212 (450)
Q Consensus 164 ---~~~g~---~v~~v~~~----------d--------~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~~I~ 212 (450)
..++. .+..++.+ + .+++++.+. .+++.+|++|.+....|.+.| +++|.
T Consensus 208 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr 287 (504)
T PLN02760 208 ALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQ 287 (504)
T ss_pred hhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHH
Confidence 00111 12222211 1 134666552 245789999999998899887 99999
Q ss_pred HHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh------hhh
Q 013079 213 RLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------QGA 279 (450)
Q Consensus 213 ~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------~~~ 279 (450)
++|++||+++|+||+++++.. ....+.+|+++ ++|.+|+...++ |.+++++++++.+.... .+.
T Consensus 288 ~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgK~lggG~~Pi-gAv~~~~~i~d~~~~~~~~~~~~~h~ 364 (504)
T PLN02760 288 AVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS--LAKALSSAYMPI-GAVLVSPEISDVIHSQSNKLGSFAHG 364 (504)
T ss_pred HHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE--ecccccCCcccc-ceEeecHHHHhhhhcccccccCcccC
Confidence 999999999999999966531 11223478766 899998543467 66888888887765310 112
Q ss_pred hhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013079 280 LMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 359 (450)
Q Consensus 280 ~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 359 (450)
.+..|+.++..++...+..++.. ...++.+++.++|.+.|+++. + +|... +.+|.|.++.+++
T Consensus 365 ~T~~gnPl~~Aaala~Le~i~~~-~l~~~~~~~g~~l~~~L~~l~-~--~~~v~-------------~vrG~Gl~~gie~ 427 (504)
T PLN02760 365 FTYSGHPVSCAVALEALKIYKER-NIPEHVNKIAPRFQDGIKAFS-G--SPIIG-------------EIRGTGLILGTEF 427 (504)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHh-c--CCCee-------------eEEeCceEEEEEE
Confidence 23444444444443333322211 234455666677777776541 1 11110 2347899999998
Q ss_pred C
Q 013079 360 E 360 (450)
Q Consensus 360 ~ 360 (450)
.
T Consensus 428 ~ 428 (504)
T PLN02760 428 V 428 (504)
T ss_pred e
Confidence 5
No 285
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.70 E-value=4e-15 Score=136.18 Aligned_cols=266 Identities=24% Similarity=0.292 Sum_probs=184.2
Q ss_pred CCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEE-eCCCchhHHHHHH------
Q 013079 87 DRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVA-ARTLYGGTHALLT------ 159 (450)
Q Consensus 87 ~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~-~~~~y~~~~~~~~------ 159 (450)
|+++|.|.. -.++.|++..|+.+|+|.+++-+-+.+||.||..+|.++++|||+.+. ...-|....+.+-
T Consensus 56 ~stGYGydD---~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~ 132 (416)
T COG4100 56 GSTGYGYDD---LGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQ 132 (416)
T ss_pred CCCCCCccc---cchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCc
Confidence 455655543 345678889999999998766554444899999999999999999774 4455766655541
Q ss_pred HhCCCccCeeEEEeCCC-----CHHHHHHhhhcCCceEEEEe----cCCCCcccccCHHHHHHHHHhc--CCEEEEeCCC
Q 013079 160 HFFPRACNITTTFVDIS-----DHEMVNSAIVQGRTKVLYFE----SISNPTLAVANIPELSRLAHDK--GVTVVVDNTF 228 (450)
Q Consensus 160 ~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~----~~~NptG~v~~l~~I~~la~~~--gi~livD~~~ 228 (450)
..+.. +|+...-++.. |.+.+..++ +++||+|.|. ...-|.-.+.+++++.++.|+. ++++.||++|
T Consensus 133 gSL~d-fgi~Y~~v~Lt~~gkiD~~~v~~~i-~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCY 210 (416)
T COG4100 133 GSLKD-FGIKYKAVPLTADGKIDIQAVKTAI-SDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCY 210 (416)
T ss_pred ccHHH-hCcceeecccccCCcccHHHHHHhc-CccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 11222 46666666654 899999999 8999999996 4566888888999999999874 7999999999
Q ss_pred CCCC--CCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh--hhhhhccCCCchHHHHHHHHccCCcHHH
Q 013079 229 SPLV--LSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH--QGALMLLGPTMNPKVAFELSERIPHLGL 304 (450)
Q Consensus 229 ~~~~--~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~--~~~~~~~g~~~~~~~a~~~~~~~~~l~~ 304 (450)
+.|. ..|...|+|++.+|+-|..|+.-...|||+.++.++++...... .+..+-.|.++.+. ..+.+++---+.
T Consensus 211 GEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~e~Gat~~~l--~~myqGlFlAPh 288 (416)
T COG4100 211 GEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGREGGATLYSL--REMYQGLFLAPH 288 (416)
T ss_pred hhhhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCccccccccHHHH--HHHHhhhccchH
Confidence 8885 46788899999999999999776668899999999998764221 11122223332221 222233333334
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 305 RMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 305 ~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
...+..+-+......|.+++..++ |. ...+..+ -+-++.|.+.+..-.|+.+++.
T Consensus 289 vv~qa~Kga~fta~~le~lg~~~~-P~-~~~kRtD-------------lIQavkf~~~eKmIaFcqaiQ~ 343 (416)
T COG4100 289 VVSQAVKGAHFTARFLEKLGFPVN-PK-YDAKRTD-------------LIQAVKFGSKEKMIAFCQAIQA 343 (416)
T ss_pred HHHHHhhhhHHHHHHHHHcCCCCC-Cc-ccccccc-------------hhhheecCCHHHHHHHHHHHhh
Confidence 444445555666667777776543 22 1222222 2566888888888899988874
No 286
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.70 E-value=1.6e-14 Score=143.98 Aligned_cols=223 Identities=14% Similarity=0.105 Sum_probs=148.0
Q ss_pred cccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHH-HHHhCCCccCeeE
Q 013079 92 IYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHAL-LTHFFPRACNITT 170 (450)
Q Consensus 92 ~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~-~~~~~~~~~g~~v 170 (450)
.|+ +.|+..+|++.+++++|.+.+++|++ ||.|+++++...+++||.| +...|...... +. ..|...
T Consensus 73 ~Ya--gd~s~~~LE~~vAe~lG~e~aV~v~s---GTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~-----~~Ga~f 140 (460)
T PRK13237 73 AYA--GSRNFYHLEETVQEYYGFKHVVPTHQ---GRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQE-----LNGGIF 140 (460)
T ss_pred hhc--CCCcHHHHHHHHHHHHCCCeEEEeCC---HHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHH-----hCCcEE
Confidence 355 67899999999999999999999999 9999998766668899964 55544444333 32 134422
Q ss_pred EEe------------CC---CCHHHHHHhhhcC----CceEEEEecCCCCcc-ccc---CHHHHHHHHHhcCCEEEEeCC
Q 013079 171 TFV------------DI---SDHEMVNSAIVQG----RTKVLYFESISNPTL-AVA---NIPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 171 ~~v------------~~---~d~~~l~~ai~~~----~t~lv~i~~~~NptG-~v~---~l~~I~~la~~~gi~livD~~ 227 (450)
.-+ +. .|+++|+++| ++ ++++|.++.++|..| ... ++++|.++|+++|+++|.|.+
T Consensus 141 vDi~~d~a~~~~~~~p~tgnlD~d~Le~~I-~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaA 219 (460)
T PRK13237 141 VDIIIDEAHDAQSDHPFKGNVDLDKLQALI-DEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDAT 219 (460)
T ss_pred EeeecccccccccCCCCCCCcCHHHHHHHh-ccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECc
Confidence 211 11 1899999999 43 355788888888884 443 689999999999999999999
Q ss_pred C-CC---CC------CCccCC---------CCeEEEeCCCCccccCccceEEEEE-cCHHHHHHHHHHhh--hhhhccCC
Q 013079 228 F-SP---LV------LSPARL---------GADVVVHSISKFISGGADIIAGAVC-GPANLVNSMMDLHQ--GALMLLGP 285 (450)
Q Consensus 228 ~-~~---~~------~~~~~~---------g~di~~~S~sK~~g~~g~~igG~l~-~~~~~~~~l~~~~~--~~~~~~g~ 285 (450)
. .+ +. +..... ..|.++.|++|.++.+ +||+++ .++++.++++...- ......|+
T Consensus 220 ra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~---~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg 296 (460)
T PRK13237 220 RCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN---IGGFLAMNDEELFDEAKELVVVYEGMPSYGG 296 (460)
T ss_pred chhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC---CceEEEECCHHHHHHHHHhccccCCCcCCCC
Confidence 6 22 11 111111 4799999999999875 368875 46788888876632 11111222
Q ss_pred CchH-HHHHHHHccCCcHH-HHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013079 286 TMNP-KVAFELSERIPHLG-LRMKEHCHRALIFARRMKKLGLKVLYPG 331 (450)
Q Consensus 286 ~~~~-~~a~~~~~~~~~l~-~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 331 (450)
++. ...+++.-..+... ...++.....++|.+.|.+.|..+..|.
T Consensus 297 -~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ 343 (460)
T PRK13237 297 -MAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAAGVPIVEPV 343 (460)
T ss_pred -hhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence 212 11111111112222 3444446677899999999998777764
No 287
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.70 E-value=1e-14 Score=148.65 Aligned_cols=255 Identities=13% Similarity=0.177 Sum_probs=154.8
Q ss_pred CCChhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCC------C
Q 013079 96 HFNPTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP------R 164 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~------~ 164 (450)
..++...++.++|+++... +.++|++| |+||+..|++... ....+|+.....||+.......... .
T Consensus 82 ~~~~~~~~lae~L~~~~p~~~~~~v~f~~S---GseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~ 158 (445)
T PRK08593 82 MYHEPLVRLAKKLCELAPGDFEKRVTFGLS---GSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRR 158 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCc---hHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCccccc
Confidence 4578888999999998742 47899999 9999999998532 2235788888888886432211100 0
Q ss_pred cc---CeeEEEeCCCC-----------------HHHHHHhhh----cCCceEEEEecCCCCcccccC----HHHHHHHHH
Q 013079 165 AC---NITTTFVDISD-----------------HEMVNSAIV----QGRTKVLYFESISNPTLAVAN----IPELSRLAH 216 (450)
Q Consensus 165 ~~---g~~v~~v~~~d-----------------~~~l~~ai~----~~~t~lv~i~~~~NptG~v~~----l~~I~~la~ 216 (450)
.. ...+..++..| ++++++.+. .+++.+|++|++.+..|.+.+ +++|.++|+
T Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~ 238 (445)
T PRK08593 159 KYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCR 238 (445)
T ss_pred CCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 00 01123333221 134444442 257899999999998898866 999999999
Q ss_pred hcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchH
Q 013079 217 DKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNP 289 (450)
Q Consensus 217 ~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~ 289 (450)
+||+++|+||+++++... -..+..|+++ ++|.++ .|.++ |++++++++++.+... ....+..++.+..
T Consensus 239 ~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t--~gK~l~-~G~p~-gav~~~~~i~~~~~~~-~~~~T~~~~pl~~ 313 (445)
T PRK08593 239 EHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMS--FGKSLA-GGMPM-SAIVGRKEIMESLEAP-AHLFTTGANPVSC 313 (445)
T ss_pred HcCCEEEEechhhCCCcCchHHHHHhcCCCCCEee--eccccc-CCccc-EEEEEcHHHHhhhccC-CCCCCCCCCHHHH
Confidence 999999999998655321 1122467665 999998 46777 8888998888877422 1122233444333
Q ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--------
Q 013079 290 KVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-------- 361 (450)
Q Consensus 290 ~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-------- 361 (450)
.++...+..++. +...++..++.++|.+.|+++..+ +|... +.+|.|.++.+++..
T Consensus 314 aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~v~-------------~vrG~Gl~~gi~l~~~~~~~~~~ 377 (445)
T PRK08593 314 AAALATIDMIED-ESLLQRSAEKGEYARKRFDQWVSK--YNFVG-------------DVRGYGLSIGIDIVSDKKLKTRD 377 (445)
T ss_pred HHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc--CCcEE-------------EEeccceEEEEEEecCCCcCCCc
Confidence 333333332221 123344455556666666553111 11100 234788898888742
Q ss_pred HHHHHHHHHHhhc
Q 013079 362 EEKANRLMNYLQN 374 (450)
Q Consensus 362 ~~~~~~~~~~l~~ 374 (450)
...+..+...+..
T Consensus 378 ~~~~~~~~~~~~~ 390 (445)
T PRK08593 378 NEAALKICNYCFE 390 (445)
T ss_pred HHHHHHHHHHHHH
Confidence 1234456665543
No 288
>PLN02880 tyrosine decarboxylase
Probab=99.70 E-value=9.2e-15 Score=150.23 Aligned_cols=244 Identities=17% Similarity=0.149 Sum_probs=151.6
Q ss_pred HHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCe---------EEEecChHHHHHHHHHHHHHhcc-----C-
Q 013079 76 MRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEA---------AYCTASDKAGMSAISSVLMQLCS-----S- 140 (450)
Q Consensus 76 ~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~---------~~~tsg~~~gt~ai~~al~~l~~-----~- 140 (450)
+.+++...+++....+..+......-+++-+.+++++|.+. .++|+| ||+||..++..... .
T Consensus 99 lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsg---gs~anl~al~~AR~~~~~~~g 175 (490)
T PLN02880 99 LGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGT---ASEAVLVVLLAARDRVLRKVG 175 (490)
T ss_pred HHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCc---cHHHHHHHHHHHHHHHHHHhc
Confidence 33344444544333344333333444566677888887543 589999 99999888865321 1
Q ss_pred ----CC-EEEEeCCCchhHHHHHHHhCCCccCe---eEEEeCCC-------CHHHHHHhhhcC-----CceEEEEecCCC
Q 013079 141 ----GG-HVVAARTLYGGTHALLTHFFPRACNI---TTTFVDIS-------DHEMVNSAIVQG-----RTKVLYFESISN 200 (450)
Q Consensus 141 ----gd-~Vi~~~~~y~~~~~~~~~~~~~~~g~---~v~~v~~~-------d~~~l~~ai~~~-----~t~lv~i~~~~N 200 (450)
.. .|++++..|.++...+. ++|+ .++.|+.+ |+++|+++|++. .+-+|+.+..+.
T Consensus 176 ~~~~~~~vv~~S~~aH~Sv~Kaa~-----~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT 250 (490)
T PLN02880 176 KNALEKLVVYASDQTHSALQKACQ-----IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTT 250 (490)
T ss_pred ccccCCeEEEEcCCchHHHHHHHH-----HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCC
Confidence 12 45578888999988875 2444 23444432 889999988321 245566667788
Q ss_pred CcccccCHHHHHHHHHhcCCEEEEeCCCCCC-CCCc------cC-CCCeEEEeCCCCccccCccceEEEEEcC-HH-HHH
Q 013079 201 PTLAVANIPELSRLAHDKGVTVVVDNTFSPL-VLSP------AR-LGADVVVHSISKFISGGADIIAGAVCGP-AN-LVN 270 (450)
Q Consensus 201 ptG~v~~l~~I~~la~~~gi~livD~~~~~~-~~~~------~~-~g~di~~~S~sK~~g~~g~~igG~l~~~-~~-~~~ 270 (450)
.+|.+.|+++|+++|+++|+++|||++|++. ...+ .. .++|.++.++||++..|-. . |+++.+ .. +..
T Consensus 251 ~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~-~-g~llvr~~~~l~~ 328 (490)
T PLN02880 251 SSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFD-C-SLLWVKDRNALIQ 328 (490)
T ss_pred cCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCcc-E-EEEEEeCHHHHHH
Confidence 9999999999999999999999999999443 2221 12 2689999999999986643 3 666543 32 223
Q ss_pred HHHHHhhhhhhc-----------------cCCCchHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCC
Q 013079 271 SMMDLHQGALML-----------------LGPTMNPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYP 330 (450)
Q Consensus 271 ~l~~~~~~~~~~-----------------~g~~~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p 330 (450)
.+... ..+... .+-.......|..++ +.+.+.+++++..++++++.+.|++.+. ++..|
T Consensus 329 ~~~~~-~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~ 407 (490)
T PLN02880 329 SLSTN-PEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP 407 (490)
T ss_pred HHccC-HHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence 22110 000000 111111333333332 4456777788888999999999988754 55444
No 289
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=9.4e-15 Score=149.15 Aligned_cols=255 Identities=14% Similarity=0.162 Sum_probs=156.1
Q ss_pred CCChhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCC----Ccc
Q 013079 96 HFNPTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP----RAC 166 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~----~~~ 166 (450)
..++...++.++|+++... +.++|++| |++|+..+++... ...++||+....||+.......... ...
T Consensus 96 ~~~~~~~~la~~l~~~~p~~~~~~v~f~~s---GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~ 172 (443)
T PRK06058 96 TPYEGYVAVAEQLNRLTPGDHEKRSALFNS---GAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKS 172 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCC---cHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCccccc
Confidence 4567778899999988742 47899999 9999999998431 2346899999999987643321100 000
Q ss_pred Ce-----eEEEeCC----CC---------------HHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhc
Q 013079 167 NI-----TTTFVDI----SD---------------HEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDK 218 (450)
Q Consensus 167 g~-----~v~~v~~----~d---------------~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~ 218 (450)
++ .+..++. .+ ++.+++.+..+++++|++|.++...|.+.| +++|.++|++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~ 252 (443)
T PRK06058 173 GFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCREN 252 (443)
T ss_pred ccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 10 1122211 11 222334442367889999988877777754 99999999999
Q ss_pred CCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHH
Q 013079 219 GVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKV 291 (450)
Q Consensus 219 gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~ 291 (450)
|+++|+||+++++... ......|+++ ++|.++ .|.++ |++++++++++.+..... ..+..|+.+++.+
T Consensus 253 gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~--~gK~l~-~G~Pi-~av~~~~~i~~~~~~~~~-~~T~~gnpl~~aa 327 (443)
T PRK06058 253 GVVFIADEVQTGFARTGAWFACEHEGIVPDLIT--TAKGIA-GGLPL-SAVTGRAEIMDAPHPGGL-GGTYGGNPVACAA 327 (443)
T ss_pred CCEEEEeccccCCCcChhhhHHHhcCCCCCEEE--Eccccc-CCCcc-EEEEEcHHHHhhccCCCC-CCCCCCCHHHHHH
Confidence 9999999999666321 1123468887 679999 57998 888888888877643322 2234455555444
Q ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-------HHH
Q 013079 292 AFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-------EEK 364 (450)
Q Consensus 292 a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-------~~~ 364 (450)
+...+..++. ....++..++.+++.+.|+++..+ +|... +.+|.|.++.+++.. .+.
T Consensus 328 a~a~L~~~~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~i~-------------~vrg~G~~~~i~~~~~~~~~~~~~~ 391 (443)
T PRK06058 328 ALAAIETIEE-DDLVARARQIEALMTDRLRALAAE--DDRIG-------------DVRGRGAMIAIELVKPGTTEPDAEL 391 (443)
T ss_pred HHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhh--CCcEE-------------eeeccceEEEEEEecCCCCCCcHHH
Confidence 4444432221 123344555566777777653211 11000 223788899998842 223
Q ss_pred HHHHHHHhhc
Q 013079 365 ANRLMNYLQN 374 (450)
Q Consensus 365 ~~~~~~~l~~ 374 (450)
+..++..+..
T Consensus 392 ~~~l~~~~~~ 401 (443)
T PRK06058 392 TKALAAAAHA 401 (443)
T ss_pred HHHHHHHHHH
Confidence 4556655543
No 290
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=5.5e-15 Score=149.76 Aligned_cols=298 Identities=12% Similarity=0.132 Sum_probs=176.1
Q ss_pred CCCChhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHh------CC
Q 013079 95 RHFNPTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHF------FP 163 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~------~~ 163 (450)
...++...++.++|+++... +.++|++| |+||+..|++... ....+|+.....||+........ ..
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~S---GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 155 (425)
T PRK07495 79 VVPYENYVRLAERLNALVPGDFAKKTIFVTT---GAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYK 155 (425)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCc---hHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccc
Confidence 45577788899999998753 57899999 9999999998542 22357898888898864322111 00
Q ss_pred CccC---eeEEEeCCCC----------HHHHHHhhh----cCCceEEEEecCCCCccccc-C---HHHHHHHHHhcCCEE
Q 013079 164 RACN---ITTTFVDISD----------HEMVNSAIV----QGRTKVLYFESISNPTLAVA-N---IPELSRLAHDKGVTV 222 (450)
Q Consensus 164 ~~~g---~~v~~v~~~d----------~~~l~~ai~----~~~t~lv~i~~~~NptG~v~-~---l~~I~~la~~~gi~l 222 (450)
..++ ..+.+++.++ ++++++.+. .+++++|+++.++..+|.+. | +++|.++|++||+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~ll 235 (425)
T PRK07495 156 VGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILL 235 (425)
T ss_pred cCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 0011 1233444322 455566652 24688999999887788553 2 889999999999999
Q ss_pred EEeCCCCCCCCCc-----cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHc
Q 013079 223 VVDNTFSPLVLSP-----ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSE 297 (450)
Q Consensus 223 ivD~~~~~~~~~~-----~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~ 297 (450)
|+||+|+++.... ...+...-+.+++|.++ .|.++ |++++++++++.+..... ..+..++.+.+.++...+.
T Consensus 236 I~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~-~G~pi-gav~~~~~i~~~~~~~~~-~~T~~~~pl~~aaa~a~l~ 312 (425)
T PRK07495 236 IADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLA-GGFPL-AAVTGRAEIMDAPGPGGL-GGTYGGNPLGIAAAHAVLD 312 (425)
T ss_pred EEechhhcCCcCCCceeecccCCCCCEEeehhhhc-CCccc-eEEEEcHHHHhccCCCCc-CCCCCCCHHHHHHHHHHHH
Confidence 9999986553221 11233333455999999 57888 889999888877643221 2223344444443333333
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH-------HHHHHHHH
Q 013079 298 RIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE-------EKANRLMN 370 (450)
Q Consensus 298 ~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~-------~~~~~~~~ 370 (450)
.++. ....++..++.+++.+.|+++-.+ +|... +.+|.|.++++++... .....+..
T Consensus 313 ~l~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~i~-------------~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~ 376 (425)
T PRK07495 313 VIEE-EDLCERANQLGNRLKQRLASLRET--VPEIA-------------DIRGPGFMNAVEFNDADSGLPSAEFANRVRL 376 (425)
T ss_pred HHHh-chHHHHHHHHHHHHHHHHHHHHhh--CCCee-------------eeecCceEEEEEEecCCCCCccHHHHHHHHH
Confidence 2211 123344455666666666653211 12110 2236788999998531 12344555
Q ss_pred HhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC---CCCHHHHHHHHHHHHHHhh
Q 013079 371 YLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY---LGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 371 ~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~---~~~~~~~i~~l~~al~~~~ 443 (450)
.+.. .|++....| ...+.|||...+ .++.++.++.|.++|.+++
T Consensus 377 ~~~~---~Gvl~~~~g--------------------------~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 377 KALE---KGLILLTCG--------------------------VHGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred HHHH---CCeEEeecC--------------------------CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 5443 232211001 113668888661 3556666677777776553
No 291
>PLN02263 serine decarboxylase
Probab=99.69 E-value=2.2e-14 Score=144.20 Aligned_cols=235 Identities=14% Similarity=0.124 Sum_probs=160.5
Q ss_pred CCCCCCCCccccC---CCChhHHHHHHHHHHHhCCCe----EEEecChHHHHHHHHHHHHHhcc--CCCEEEEeCCCchh
Q 013079 83 ELGPDRDFFIYSR---HFNPTVLNLSRQMAALEGTEA----AYCTASDKAGMSAISSVLMQLCS--SGGHVVAARTLYGG 153 (450)
Q Consensus 83 ~~~n~~~~~~y~r---~~~~~~~~l~~~iA~l~g~~~----~~~tsg~~~gt~ai~~al~~l~~--~gd~Vi~~~~~y~~ 153 (450)
.++|-...+.++. .....-.++-+.+++++|.+. -++|+| |||||..++....+ +...++++...|.+
T Consensus 114 ~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsG---GTEaNL~Al~aARe~~~~~vvy~S~~aH~S 190 (470)
T PLN02263 114 SINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNC---GTEGNLHGILVGREVFPDGILYASRESHYS 190 (470)
T ss_pred hccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCc---HHHHHHHHHHHHHhhcCCcEEEEcCCccHH
Confidence 3344333344443 344445667778888888632 599999 99999999876532 23468889999999
Q ss_pred HHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCC--ceEEEEecCCCCcccccCHHHHHHHHHhcCC-----E
Q 013079 154 THALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGR--TKVLYFESISNPTLAVANIPELSRLAHDKGV-----T 221 (450)
Q Consensus 154 ~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~--t~lv~i~~~~NptG~v~~l~~I~~la~~~gi-----~ 221 (450)
+...+. ++|++++.|+.+ |+++|+++|..+. +-+|+.+..+.++|.+.|+++|+++|+++|+ +
T Consensus 191 v~KAa~-----llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iw 265 (470)
T PLN02263 191 VFKAAR-----MYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFY 265 (470)
T ss_pred HHHHHH-----hcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCee
Confidence 998885 467777777765 8999999883322 4566677788899999999999999999997 9
Q ss_pred EEEeCCCCCCCC----Cc--cC--CCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHH----hhhhhhccCCCc--
Q 013079 222 VVVDNTFSPLVL----SP--AR--LGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL----HQGALMLLGPTM-- 287 (450)
Q Consensus 222 livD~~~~~~~~----~~--~~--~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~----~~~~~~~~g~~~-- 287 (450)
+|||++|+++.. .. .+ .++|-++.+.||+++.|-. . |+++.+......+... ........|+-.
T Consensus 266 lHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~-c-gvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~ 343 (470)
T PLN02263 266 IHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMP-C-GVQITRMEHINVLSSNVEYLASRDATIMGSRNGH 343 (470)
T ss_pred EEEeccchhhHhhhcccccccCCCcCccEEEECCccccCCCcC-E-EEEEEehhhHhhhccChHhhCCCCCCcCCCCCcH
Confidence 999999955432 11 11 1489999999999996643 3 6665555444333111 000001222222
Q ss_pred hHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCCee
Q 013079 288 NPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGLKV 327 (450)
Q Consensus 288 ~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v 327 (450)
....+|..++ +.+.+.+++++..++++++.++|++.+...
T Consensus 344 ~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~ 385 (470)
T PLN02263 344 APIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISA 385 (470)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 2344555444 445678888889999999999999988743
No 292
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=1.2e-14 Score=148.08 Aligned_cols=287 Identities=14% Similarity=0.179 Sum_probs=174.1
Q ss_pred CCChhHHHHHHHHHHHhC---CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhC--------
Q 013079 96 HFNPTVLNLSRQMAALEG---TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF-------- 162 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g---~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~-------- 162 (450)
+.++...++.++|+++.. .+.++|++| |+||+..|++... ...++|+.....||+.........
T Consensus 94 ~~~~~~~~lAe~L~~~~p~~~~~~v~f~~S---GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~ 170 (441)
T PRK05769 94 FYYEPAVELAERLVEIAPGGFEKKVFFTNS---GTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRK 170 (441)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCc---hHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCccccc
Confidence 456778899999999875 367899999 9999999998542 223578888888888654321110
Q ss_pred ---CCccCeeEEEeCCC----------C--------HHHHHH-hhh----cCCceEEEEecCCCCcccccC----HHHHH
Q 013079 163 ---PRACNITTTFVDIS----------D--------HEMVNS-AIV----QGRTKVLYFESISNPTLAVAN----IPELS 212 (450)
Q Consensus 163 ---~~~~g~~v~~v~~~----------d--------~~~l~~-ai~----~~~t~lv~i~~~~NptG~v~~----l~~I~ 212 (450)
+...| +..++.. + ++.+++ .+. .+++.+|++|.++...|.+.| +++|.
T Consensus 171 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~ 248 (441)
T PRK05769 171 GFFPLMPG--VIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELR 248 (441)
T ss_pred CCCCCCCC--eEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHH
Confidence 10012 2233221 1 233554 221 246889999999999999888 99999
Q ss_pred HHHHhcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCC
Q 013079 213 RLAHDKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGP 285 (450)
Q Consensus 213 ~la~~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~ 285 (450)
++|+++|+++|+||+++++... ...+..|+++ ++|.++ .|.++ |++++++++...+... ...+..++
T Consensus 249 ~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~-~G~p~-gav~~~~~i~~~~~~~--~~~T~~g~ 322 (441)
T PRK05769 249 KLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIA-GGLPL-GAVIGRAELMFLPPGS--HANTFGGN 322 (441)
T ss_pred HHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEE--Eccccc-CCccc-EEEEEehhhhhcCCCC--CCCCCCcC
Confidence 9999999999999998655321 1122468876 789999 46887 8888887776432211 12223444
Q ss_pred CchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCH---
Q 013079 286 TMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETE--- 362 (450)
Q Consensus 286 ~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~--- 362 (450)
.+...++...+..++. ...++..++.++|.+.|+++..+...+. +.+|.|.++.+++...
T Consensus 323 p~~~aaa~a~L~~l~~--~~~~~~~~~g~~l~~~L~~l~~~~~~~~---------------~vrg~G~~~~i~~~~~~~~ 385 (441)
T PRK05769 323 PVAAAAALATLEELEE--GLLENAQKLGEYLRKELKELKEKYEFIG---------------DVRGLGLMIGVELVKDRKE 385 (441)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCee---------------eeecceEEEEEEeccCCcc
Confidence 4444444333333332 3445556666777777765421111111 2237888999998521
Q ss_pred ---HHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 013079 363 ---EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKAL 439 (450)
Q Consensus 363 ---~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al 439 (450)
.....+...+.. .|++... .....|||+.. ...+++.++.+.+++
T Consensus 386 ~~~~~~~~~~~~~~~---~Gil~~~----------------------------~~~~~lr~~p~-l~~t~~~id~~~~~l 433 (441)
T PRK05769 386 PDPKLRDKVLYEAFK---RGLLLLG----------------------------AGKSAIRIIPP-LIITEEEADIGLEIL 433 (441)
T ss_pred ccHHHHHHHHHHHHh---CCcEEec----------------------------CCCCEEEEeCC-CCCCHHHHHHHHHHH
Confidence 234455555543 2321100 01356899988 755666666655555
Q ss_pred HHh
Q 013079 440 SRM 442 (450)
Q Consensus 440 ~~~ 442 (450)
++.
T Consensus 434 ~~~ 436 (441)
T PRK05769 434 EEA 436 (441)
T ss_pred HHH
Confidence 543
No 293
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.69 E-value=1.2e-14 Score=141.89 Aligned_cols=243 Identities=15% Similarity=0.192 Sum_probs=159.6
Q ss_pred ccccCCCChhHHHHHHHHHHHhCC-CeEEEecChHHHHHHHHHHHHHh--ccCCCEEEEeCCCchhHHHHHHHhC-----
Q 013079 91 FIYSRHFNPTVLNLSRQMAALEGT-EAAYCTASDKAGMSAISSVLMQL--CSSGGHVVAARTLYGGTHALLTHFF----- 162 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~g~-~~~~~tsg~~~gt~ai~~al~~l--~~~gd~Vi~~~~~y~~~~~~~~~~~----- 162 (450)
..||.- .+.--++.+.|.++.+. |.+-|++| ||||...+++.. ....|+|+...-+||+....+-.-.
T Consensus 86 ~~fg~P-te~Ei~~Aell~~~~p~~e~vrfvnS---GTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~ 161 (432)
T COG0001 86 LSFGAP-TELEVELAELLIERVPSIEKVRFVNS---GTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAA 161 (432)
T ss_pred CCCCCC-CHHHHHHHHHHHHhcCcccEEEEecc---hhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcc
Confidence 345642 23334555677777765 88999999 999999999753 2234799999999998776653110
Q ss_pred ----CCccCe------eEEEeCCCCHHHHHHhhhc--CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeC
Q 013079 163 ----PRACNI------TTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDN 226 (450)
Q Consensus 163 ----~~~~g~------~v~~v~~~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~ 226 (450)
+...|+ .+..++.+|++.++++++. ++..+|++|.+....|.|.| +++|.++|+++|+++|.||
T Consensus 162 t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DE 241 (432)
T COG0001 162 TLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDE 241 (432)
T ss_pred cCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 111122 2334556699999999854 37899999998888899876 8899999999999999999
Q ss_pred CCCCCCCC------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh--hhhhccCCCchHHHHHHHHcc
Q 013079 227 TFSPLVLS------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFELSER 298 (450)
Q Consensus 227 ~~~~~~~~------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~~~~ 298 (450)
+.+++... ...+.+|+.+ +.|.+| .|.++ |++.++.++++.+..... +..+..|+.++..+....+..
T Consensus 242 ViTGFR~~~gGaq~~~gi~PDltt--lGKiIG-GGlP~-ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~ 317 (432)
T COG0001 242 VITGFRVALGGAQGYYGVEPDLTT--LGKIIG-GGLPI-GAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEE 317 (432)
T ss_pred chhhcccCCcccccccCcCcchhh--hhhhhc-CCcce-eeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHH
Confidence 98666543 2233467776 999999 68888 999999999987754322 122344554444444443333
Q ss_pred CCcHHHHHHHHHHHHHHHHHHH----HhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 299 IPHLGLRMKEHCHRALIFARRM----KKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 299 ~~~l~~~~~~~~~~~~~l~~~L----~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+...+..++++.++.++|.+.| .+++..+... +.|.++.|.|.
T Consensus 318 l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~-------------------~~gsm~~i~F~ 364 (432)
T COG0001 318 LMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVN-------------------RVGSMFGIFFT 364 (432)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-------------------eecceEEEEec
Confidence 3221113444445555555555 4455433221 35668888775
No 294
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.69 E-value=6.4e-15 Score=145.89 Aligned_cols=164 Identities=19% Similarity=0.210 Sum_probs=124.4
Q ss_pred CCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc-cCC-CEEEEeCCCchhHHHHHHH----------hC
Q 013079 95 RHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC-SSG-GHVVAARTLYGGTHALLTH----------FF 162 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~-~~g-d~Vi~~~~~y~~~~~~~~~----------~~ 162 (450)
.+.++...++.++++++.+.+.++|++| |++|+.++++... ..| ++||+....|++....... +.
T Consensus 62 ~~~~~~~~~la~~l~~~~~~~~v~~~~S---GseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~ 138 (364)
T PRK04013 62 MFEHEEKEEMLEELSKWVNYEYVYMGNS---GTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFE 138 (364)
T ss_pred CcCCHHHHHHHHHHHhhcCCCEEEEeCc---hHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCC
Confidence 3457888999999999988889999999 9999999998652 234 7899999999886533211 01
Q ss_pred CCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCccccc-C---HHHHHHHHHhcCCEEEEeCCCCCCCC-----
Q 013079 163 PRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA-N---IPELSRLAHDKGVTVVVDNTFSPLVL----- 233 (450)
Q Consensus 163 ~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~-~---l~~I~~la~~~gi~livD~~~~~~~~----- 233 (450)
+. -..+.+++.+|++.+++.+ .+++++|++++.+...|.+. | +++|.++|+++|+++|.||+++++..
T Consensus 139 p~--~~~~~~~~~~d~~~l~~~i-~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a 215 (364)
T PRK04013 139 PL--VPGFKHIPFNDVEAAKEAI-TKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLA 215 (364)
T ss_pred CC--CCCcEEecCCCHHHHHHHh-cCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhH
Confidence 11 1234556667899999999 78899999999998888764 4 99999999999999999999855421
Q ss_pred -CccCCCCeEEEeCCCCccccCccceEEEEEcCHHH
Q 013079 234 -SPARLGADVVVHSISKFISGGADIIAGAVCGPANL 268 (450)
Q Consensus 234 -~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~ 268 (450)
....+..|+++ ++|.+++ |.++ |.++.+.++
T Consensus 216 ~~~~gv~PDiv~--~gK~lgg-G~P~-~a~~~~~~~ 247 (364)
T PRK04013 216 IEHYKVEPDIVT--MGKGIGN-GVPV-SLTLTNFDV 247 (364)
T ss_pred HHhcCCCCCEEE--ecccccC-Ccee-EEEEecccc
Confidence 11233578888 7999996 6888 656555444
No 295
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.69 E-value=1.1e-14 Score=156.28 Aligned_cols=220 Identities=16% Similarity=0.148 Sum_probs=151.6
Q ss_pred ChhHHHHHHHHHHHhCCCeE-EEecChHHHHHHHHHHHHHhcc--------CCCEEEEeCCCchhHHHHHHHhCCCccCe
Q 013079 98 NPTVLNLSRQMAALEGTEAA-YCTASDKAGMSAISSVLMQLCS--------SGGHVVAARTLYGGTHALLTHFFPRACNI 168 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~-~~tsg~~~gt~ai~~al~~l~~--------~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~ 168 (450)
.....++++.|+++.|-+.+ +..++ |+.|..+++.++.. ..+.|+++...|+.....+. ..|+
T Consensus 529 lq~i~elq~~l~eltGmd~~Sl~p~a---GA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~-----~~G~ 600 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFDAISLQPNS---GAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAA-----MAGM 600 (939)
T ss_pred HHHHHHHHHHHHHHHCCCCcccCCch---HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHH-----HCCC
Confidence 35678999999999998875 66667 77777655554421 23578899999966655553 3688
Q ss_pred eEEEeCCC-----CHHHHHHhhhc--CCceEEEEecCCCCcccccC-HHHHHHHHHhcCCEEEEeCCC-C-CC-CCCccC
Q 013079 169 TTTFVDIS-----DHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN-IPELSRLAHDKGVTVVVDNTF-S-PL-VLSPAR 237 (450)
Q Consensus 169 ~v~~v~~~-----d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~-l~~I~~la~~~gi~livD~~~-~-~~-~~~~~~ 237 (450)
+++.++.+ |+++|++++.. +++++|.+++|+| +|.+.| +++|+++||++|.++++|.++ . .. ..+|.+
T Consensus 601 ~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~ 679 (939)
T TIGR00461 601 QVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGD 679 (939)
T ss_pred EEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccc
Confidence 98888764 89999999932 4899999999999 799977 999999999999999999998 2 22 346678
Q ss_pred CCCeEEEeCCCCccc------cCccceEEEEEcCHHHHHHHHHH----------hhh---h--hhccCCCchHHHHHH--
Q 013079 238 LGADVVVHSISKFIS------GGADIIAGAVCGPANLVNSMMDL----------HQG---A--LMLLGPTMNPKVAFE-- 294 (450)
Q Consensus 238 ~g~di~~~S~sK~~g------~~g~~igG~l~~~~~~~~~l~~~----------~~~---~--~~~~g~~~~~~~a~~-- 294 (450)
+|+|++++|.||.++ ||| + |++..++.+...+-.. +.. . ...++.......++.
T Consensus 680 ~GaDi~~~s~HKtf~~P~G~GGPg--~-G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi 756 (939)
T TIGR00461 680 LGADVCHLNLHKTFCIPHGGGGPG--M-GPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYI 756 (939)
T ss_pred cCCCEEEecCCccCCCCCCCCCCC--e-EEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHH
Confidence 899999999999655 333 4 8888776544332110 000 0 001122122233333
Q ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCC
Q 013079 295 LSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYP 330 (450)
Q Consensus 295 ~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p 330 (450)
...+.+.+.+..+....+++++.++|++ +.++.++
T Consensus 757 ~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~ 791 (939)
T TIGR00461 757 KMMGNEGLPKASVVAILNANYMATRLKD-HYPILFV 791 (939)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCccccc
Confidence 2224455666666677889999999987 3355454
No 296
>PRK06105 aminotransferase; Provisional
Probab=99.69 E-value=6.8e-15 Score=150.48 Aligned_cols=245 Identities=14% Similarity=0.184 Sum_probs=153.5
Q ss_pred ccCCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhc------c-C-CCEEEEeCCCchhHHHHHHHhC
Q 013079 93 YSRHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLC------S-S-GGHVVAARTLYGGTHALLTHFF 162 (450)
Q Consensus 93 y~r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~------~-~-gd~Vi~~~~~y~~~~~~~~~~~ 162 (450)
+++..++...++.++|+++... +.++|++| |+||+.+|++... . + ..+|+.....||+.........
T Consensus 86 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~S---GseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t 162 (460)
T PRK06105 86 FSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNS---GSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLT 162 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheecc
Confidence 3345677888899999998743 57899999 9999999998642 1 2 2478888888888643221000
Q ss_pred C-----CccC---eeEEEeCCC------------------CHHHHHHhhh---cCCceEEEEecCCCCcccccC----HH
Q 013079 163 P-----RACN---ITTTFVDIS------------------DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IP 209 (450)
Q Consensus 163 ~-----~~~g---~~v~~v~~~------------------d~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~ 209 (450)
. +.++ ..+..++.. ..+++++.+. .+++.+|++|.++...|.+.+ ++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~ 242 (460)
T PRK06105 163 GLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWE 242 (460)
T ss_pred CCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHH
Confidence 0 0011 112222221 1355666662 246789999999988898876 99
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh-----
Q 013079 210 ELSRLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ----- 277 (450)
Q Consensus 210 ~I~~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~----- 277 (450)
+|.++|++||+++|+||+++++.. .-..+.+|+++ ++|.+++...++ |+++.++++++.+.....
T Consensus 243 ~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~--~gK~lggG~~P~-~av~~~~~i~~~~~~~~~~~~~~ 319 (460)
T PRK06105 243 KIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV--MSKQLSSSYQPL-SAVLMNEKVYDPIADESGKIGTF 319 (460)
T ss_pred HHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee--eecccccCcccc-eEEEEcHHHHHHHhcccccCccc
Confidence 999999999999999999865532 12233578886 999999643566 888888888877653211
Q ss_pred -hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013079 278 -GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLC 356 (450)
Q Consensus 278 -~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 356 (450)
+..+..|+.+...++...+..++. +...++..+..++|.+.|+++ .+ +|... +.+|.|.++.
T Consensus 320 ~h~~T~~gnpl~~aaa~a~L~~i~~-~~l~~~v~~~g~~l~~~L~~l-~~--~~~v~-------------~vrG~Gl~~g 382 (460)
T PRK06105 320 GHGFTASGHPVAAAVALENLAIIEE-RDLVGNAAERGARLQARLRAL-AD--HPLVG-------------EVRGVGLIAA 382 (460)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHh-hc--CCCeE-------------EEEecceEEE
Confidence 112233444443333333332221 123455566667777777664 21 12110 2347899999
Q ss_pred EEeC
Q 013079 357 LDME 360 (450)
Q Consensus 357 ~~l~ 360 (450)
|++.
T Consensus 383 ie~~ 386 (460)
T PRK06105 383 VELV 386 (460)
T ss_pred EEEe
Confidence 9984
No 297
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.68 E-value=3.1e-15 Score=152.07 Aligned_cols=237 Identities=16% Similarity=0.167 Sum_probs=152.2
Q ss_pred CChhHHHHHHHHHHHh-CCCeEEEecChHHHHHHHHHHHHHhcc--CCCEEEEeCCCchhHHHHHHHh--------CCCc
Q 013079 97 FNPTVLNLSRQMAALE-GTEAAYCTASDKAGMSAISSVLMQLCS--SGGHVVAARTLYGGTHALLTHF--------FPRA 165 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~-g~~~~~~tsg~~~gt~ai~~al~~l~~--~gd~Vi~~~~~y~~~~~~~~~~--------~~~~ 165 (450)
.++...+|.++|+++. +.+.++||+| |++|+..+++.... .+++||+.++.||+....+... ....
T Consensus 88 ~~~~~~~la~~L~~~~~~~~~v~~~~s---GseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 164 (426)
T PRK00062 88 PTELEVELAELVIELVPSIEMVRMVNS---GTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPD 164 (426)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEecC---HHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCC
Confidence 4667788999999876 4578999999 99999999987543 3578999999999975332111 0000
Q ss_pred c-Ce------eEEEeCCCCHHHHHHhhhc--CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCC
Q 013079 166 C-NI------TTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLV 232 (450)
Q Consensus 166 ~-g~------~v~~v~~~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~ 232 (450)
. +. ....++..|++++++.+.. +++++|+++.+...+|.+.+ +++|.++|++||+++|+||+|+++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r 244 (426)
T PRK00062 165 SPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFR 244 (426)
T ss_pred CCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccc
Confidence 0 11 1223344588999888732 47889999988888999988 9999999999999999999996552
Q ss_pred CC------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh--hhhhccCCCchHHHHHHHHccCCcHHH
Q 013079 233 LS------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFELSERIPHLGL 304 (450)
Q Consensus 233 ~~------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~~~~~~~l~~ 304 (450)
.. ......|+ .+++|.++ .|+++ |+++.++++++.+..... ...+..++.+.+.++...+..++.- .
T Consensus 245 ~g~~~~~~~~~~~pDi--~~~gK~l~-~G~p~-ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~-~ 319 (426)
T PRK00062 245 VALGGAQGYYGVTPDL--TTLGKIIG-GGLPV-GAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEP-G 319 (426)
T ss_pred cCCccHHHHhCCCcch--HhhhhHhh-CCCcc-eeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcc-h
Confidence 21 11123565 56899999 56887 778888888887742211 1112234444444443343333221 2
Q ss_pred HHHHHHHHHHHHHHHHH----hCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 305 RMKEHCHRALIFARRMK----KLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 305 ~~~~~~~~~~~l~~~L~----~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
..++..+..+++.+.|+ +++.... .+|.|.++.+.+.
T Consensus 320 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------------------vrg~G~~~~i~l~ 360 (426)
T PRK00062 320 FYEELEALTKRLAEGLKEAAKKAGIPLT-------------------VNRVGSMFGLFFT 360 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCceE-------------------EEEecceEEEEEe
Confidence 33334444445555554 3443211 1257889988875
No 298
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.68 E-value=6.3e-15 Score=160.66 Aligned_cols=293 Identities=17% Similarity=0.202 Sum_probs=181.7
Q ss_pred hhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc----cCCC----EEEEeCCCchhHHHHHHHhCCCccCeeE
Q 013079 99 PTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC----SSGG----HVVAARTLYGGTHALLTHFFPRACNITT 170 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~----~~gd----~Vi~~~~~y~~~~~~~~~~~~~~~g~~v 170 (450)
....++++.|++++|.+.+.+..++ |+.|+.+++.++. ++|+ .|++++..|++....+. ..|+++
T Consensus 542 ~~i~e~q~~l~eltG~d~~sl~~~~--ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~-----~~G~~v 614 (954)
T PRK05367 542 ELIDQLEAWLAEITGYDAVSLQPNA--GAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAV-----MAGMKV 614 (954)
T ss_pred HHHHHHHHHHHHHHCCCCEEECccH--HHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHH-----HCCCEE
Confidence 4568899999999999887666541 5666645443332 4454 59999999988877664 368899
Q ss_pred EEeCCC-----CHHHHHHhhhcC--CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CC-CC-CCccCCCC
Q 013079 171 TFVDIS-----DHEMVNSAIVQG--RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SP-LV-LSPARLGA 240 (450)
Q Consensus 171 ~~v~~~-----d~~~l~~ai~~~--~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~-~~-~~~~~~g~ 240 (450)
++++.+ |+++|++++... ++.+|.+.+|++-.+...|+++|+++||++|+++++|.++ .. +. .+|.++|+
T Consensus 615 v~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GA 694 (954)
T PRK05367 615 VVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGA 694 (954)
T ss_pred EEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCC
Confidence 988764 889999988322 4677888888776333478999999999999999999998 22 22 35667899
Q ss_pred eEEEeCCCCccc------cCccceEEEEEcCHHHHHHHHHHhhhhhhc---cCCCc-h-------HHHHHH--HHccCCc
Q 013079 241 DVVVHSISKFIS------GGADIIAGAVCGPANLVNSMMDLHQGALML---LGPTM-N-------PKVAFE--LSERIPH 301 (450)
Q Consensus 241 di~~~S~sK~~g------~~g~~igG~l~~~~~~~~~l~~~~~~~~~~---~g~~~-~-------~~~a~~--~~~~~~~ 301 (450)
|+++.|+||+++ +|| + |+++.++.+...+-....+.... .|... + ...++. ...+.+.
T Consensus 695 Di~~~s~HK~f~~P~G~GGPg--~-G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~G 771 (954)
T PRK05367 695 DVSHLNLHKTFCIPHGGGGPG--V-GPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEG 771 (954)
T ss_pred CEEEecCcccCCCCcCCCCCc--e-EEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHH
Confidence 999999999964 444 4 77776654443332111000000 11111 0 111111 1123344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE-eCC--HHHHHHHHHHhhccccc
Q 013079 302 LGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD-MET--EEKANRLMNYLQNYAQF 378 (450)
Q Consensus 302 l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~-l~~--~~~~~~~~~~l~~~~~~ 378 (450)
+.+..++...+++++.++|++. ..+.+++-..... ...++.+. ++. ...+..+.++|.. +
T Consensus 772 lr~~a~~~~~~A~Yl~~~L~~~-~~~~~~~~~~~~~-------------~e~i~~~~~~~~~~g~~~~di~krL~d---~ 834 (954)
T PRK05367 772 LRQATEVAILNANYIAKRLKDH-YPVLYTGANGRVA-------------HECILDLRPLKESTGITVDDIAKRLID---Y 834 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-cCccccCCCCCcc-------------cceEEEeecccccCCCCHHHHHHHHHH---C
Confidence 5566666678889999999773 3333322111001 12245552 331 1124667777754 4
Q ss_pred cccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 379 GFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 379 g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
|..+.... ..+ ++.+||++. ..+..++++.|.+++..+.+
T Consensus 835 G~~~~t~~------------------------~pv-~~~l~i~pt-E~~s~~elDr~~~al~~i~~ 874 (954)
T PRK05367 835 GFHAPTMS------------------------FPV-AGTLMVEPT-ESESKAELDRFCDAMIAIRA 874 (954)
T ss_pred CCeEeecC------------------------Ccc-CCEEEEEee-ecCCHHHHHHHHHHHHHHHH
Confidence 43221100 011 478999999 87888888888888876643
No 299
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.68 E-value=4.2e-15 Score=135.61 Aligned_cols=310 Identities=15% Similarity=0.166 Sum_probs=203.5
Q ss_pred HHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchh
Q 013079 74 ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGG 153 (450)
Q Consensus 74 ~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~ 153 (450)
++-++.++++-..+++. .+=.........|+.+||++.+.|+++++++ +-.||..++.+++.|.|.|+.....|.+
T Consensus 88 ~a~~~aleeyGaGlssv-rfIcGtq~iHk~LE~kiAqfh~rED~ilyps---cfdANag~feail~pedAvfSDeLNhAS 163 (417)
T KOG1359|consen 88 NAGQKALEEYGAGLSSV-RFICGTQDIHKLLESKIAQFHGREDTILYPS---CFDANAGAFEAILTPEDAVFSDELNHAS 163 (417)
T ss_pred HHHHHHHHHhCCCccce-eEEecchHHHHHHHHHHHHHhCCCceEEecc---ccccchHHHHHhcChhhhhhccccccch
Confidence 44455555442333332 2223345567899999999999999999999 9999999999999998888887777877
Q ss_pred HHHHHHHhCCCccCeeEEEeCCCCHHH-HHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCC
Q 013079 154 THALLTHFFPRACNITTTFVDISDHEM-VNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPL 231 (450)
Q Consensus 154 ~~~~~~~~~~~~~g~~v~~v~~~d~~~-l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~ 231 (450)
...-+. +..+ ...+++.|++. +.++. +.+-++|.....-+..|.+.|+++|.+++++||.++++|+++ +.+
T Consensus 164 IIdGir-Lckr-----y~h~dv~~l~~~l~~a~-k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf 236 (417)
T KOG1359|consen 164 IIDGIR-LCKR-----YRHVDVFDLEHCLISAC-KMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGF 236 (417)
T ss_pred hhhhhH-HHhh-----hccchhHHHHHHHHHhh-hheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeeccccee
Confidence 766653 2222 22333334432 33333 456788888888999999999999999999999999999998 333
Q ss_pred CC----Ccc-----CCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCC--
Q 013079 232 VL----SPA-----RLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIP-- 300 (450)
Q Consensus 232 ~~----~~~-----~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~-- 300 (450)
.- -.. .-.+|++..+++|.+|+.. |||..+++.+++-++.....+. ..+++.+.....+...++
T Consensus 237 ~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~---GGyttgp~~li~llrqr~Rpyl--FSnslppavV~~a~ka~dll 311 (417)
T KOG1359|consen 237 FGETGRGTAEEFGVMGDVDIINSTLGKALGGAS---GGYTTGPKPLISLLRQRSRPYL--FSNSLPPAVVGMAAKAYDLL 311 (417)
T ss_pred ecCCCCChHHHhCCCCcceehhhhhhhhhcCCC---CCCccCChhHHHHHHhcCCcee--ecCCCChhhhhhhHHHHHHH
Confidence 21 111 1158999999999999664 7999999999988876554332 223322221111111111
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccc
Q 013079 301 -HLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFG 379 (450)
Q Consensus 301 -~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g 379 (450)
.-...+.+.+.+.+++++.+...|+.+.... || +..+-+.+...+.++.+.|...+ +=
T Consensus 312 m~s~~~i~~~~a~~qrfr~~me~aGftIsg~~---hP-----------------I~pv~lGda~lA~~~ad~lLk~G-i~ 370 (417)
T KOG1359|consen 312 MVSSKEIQSRQANTQRFREFMEAAGFTISGAS---HP-----------------ICPVMLGDARLASKMADELLKRG-IY 370 (417)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhcCceecCCC---CC-----------------ccceecccHHHHHHHHHHHHhcC-ce
Confidence 1122344556677888888877777665422 21 56677777777777777776533 11
Q ss_pred ccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 380 FMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 380 ~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
+|++| .|-.. .....||+.++ ...++++|+++.+|+..+.+
T Consensus 371 Vigfs---------~PvVP--------------~gkariRVqiS-AaHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 371 VIGFS---------YPVVP--------------KGKARIRVQIS-AAHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred EEeec---------CCcCC--------------CCceEEEEEEe-hhcCHHHHHHHHHHHHHHHH
Confidence 12322 12111 11346999999 88888888888888877643
No 300
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=3e-14 Score=135.96 Aligned_cols=282 Identities=19% Similarity=0.185 Sum_probs=186.4
Q ss_pred cccccCccccCCH-HHHHHhhcCCCCCCCCCcc-ccCCCChhHH----HHHHHHHHHhCCCeE-EEecChHHHHHHHHHH
Q 013079 61 SIEASATFTVMEP-ETMRRMFAGELGPDRDFFI-YSRHFNPTVL----NLSRQMAALEGTEAA-YCTASDKAGMSAISSV 133 (450)
Q Consensus 61 pi~~att~~~~~~-~~~~~~~~~~~~n~~~~~~-y~r~~~~~~~----~l~~~iA~l~g~~~~-~~tsg~~~gt~ai~~a 133 (450)
.+-+|-.++.+.+ +++-..|..+|.--..+.+ || +...++ .+.++..+++|++.+ +=--| |+.||.++
T Consensus 30 eLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYg--Gce~VD~vE~laierak~LFga~~anVQPhS---Gs~AN~av 104 (413)
T COG0112 30 ELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYG--GCEYVDEVEELAIERAKKLFGAEYANVQPHS---GSQANQAV 104 (413)
T ss_pred eeeeccccCCHHHHHHHhhhhhhccccCCCCccccC--CCeeHHHHHHHHHHHHHHHhCCCccccCCCC---chHHHHHH
Confidence 4567777777664 6666666665532111111 33 233333 344556678899876 44557 89999999
Q ss_pred HHHhccCCCEEEEeCCCchhHHHHHHHhCCCccC--eeEEEeCCC------CHHHHHHhhhcCCceEEEEecCCCCcccc
Q 013079 134 LMQLCSSGGHVVAARTLYGGTHALLTHFFPRACN--ITTTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAV 205 (450)
Q Consensus 134 l~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g--~~v~~v~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v 205 (450)
+.++++|||+|+-.+..+++....-.... ..| +++..++++ |.|++++.+...++|+|+.-... --..
T Consensus 105 ~~All~pGDtimgm~l~~GGHltHg~~v~--~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~Sa--Y~r~ 180 (413)
T COG0112 105 YLALLQPGDTIMGLDLSHGGHLTHGSPVN--FSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSA--YSRP 180 (413)
T ss_pred HHHHcCCCCeEecccCCCCCcccCCCCCC--ccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECccc--cccc
Confidence 99999999999999988887665431110 122 333333433 88999998867799999874322 2356
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCC------CCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCH-HHHHHHHHHhhh
Q 013079 206 ANIPELSRLAHDKGVTVVVDNTF------SPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPA-NLVNSMMDLHQG 278 (450)
Q Consensus 206 ~~l~~I~~la~~~gi~livD~~~------~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~-~~~~~l~~~~~~ 278 (450)
.|.+++.++|++.|+++++|.++ ++...+|... +|+++.|.||.+.+|- ||++..+. ++.+++....-.
T Consensus 181 id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-AdvVTtTTHKTlrGPr---GG~Il~~~eel~kkin~aVFP 256 (413)
T COG0112 181 IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-ADVVTTTTHKTLRGPR---GGIILTNDEELAKKINSAVFP 256 (413)
T ss_pred cCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cceEeCCcccCCCCCC---ceEEEeccHHHHHHhhhhcCC
Confidence 79999999999999999999996 3334577777 9999999999998764 68887774 788887653221
Q ss_pred hhhccCCCchHHHHHH--HHccC-CcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 279 ALMLLGPTMNPKVAFE--LSERI-PHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 279 ~~~~~g~~~~~~~a~~--~~~~~-~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
. ...|+.+...++.. +...+ ..+.+..++..+|++.|++.|.+.|+++..-+..+ .++
T Consensus 257 g-~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdn------------------Hl~ 317 (413)
T COG0112 257 G-LQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDN------------------HLV 317 (413)
T ss_pred c-cCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccc------------------eEE
Confidence 1 12233332222222 22233 33566777789999999999999999876544222 267
Q ss_pred EEEeC----CHHHHHHHHHHhhc
Q 013079 356 CLDME----TEEKANRLMNYLQN 374 (450)
Q Consensus 356 ~~~l~----~~~~~~~~~~~l~~ 374 (450)
.+++. +...++..++...+
T Consensus 318 lVDl~~~~~~Gk~ae~~L~~~~I 340 (413)
T COG0112 318 LVDLRSKGLTGKKAEAALERAGI 340 (413)
T ss_pred EEEcccCCCCHHHHHHHHHHcCE
Confidence 77766 35556777776654
No 301
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.68 E-value=1.8e-14 Score=147.57 Aligned_cols=216 Identities=12% Similarity=0.170 Sum_probs=135.1
Q ss_pred CCChhHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCC-----C-
Q 013079 96 HFNPTVLNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP-----R- 164 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~-----~- 164 (450)
..++...++.++|+++... +.++|++| |+||+..|++... ....+||.....||+.......... +
T Consensus 94 ~~~~~~~~la~~L~~~~p~~~~~~v~f~~s---GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 170 (451)
T PRK06918 94 MMYEPYIELAEKLAALAPGSFDKKVLFLNS---GAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKF 170 (451)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCEEEEcCC---cHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccc
Confidence 3467788899999998752 57899999 9999999998542 2235788888889886543321100 0
Q ss_pred ccC---eeEEEeCCCC-----------------HHHHHHhh----hcCCceEEEEecCCCCcccccC----HHHHHHHHH
Q 013079 165 ACN---ITTTFVDISD-----------------HEMVNSAI----VQGRTKVLYFESISNPTLAVAN----IPELSRLAH 216 (450)
Q Consensus 165 ~~g---~~v~~v~~~d-----------------~~~l~~ai----~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~ 216 (450)
.++ ..+..++..+ ++.+++.+ ..+++.+|++|.++...|.+.+ +++|.++|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~ 250 (451)
T PRK06918 171 GFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICS 250 (451)
T ss_pred cCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHH
Confidence 000 1122222110 12333332 1256889999988877787643 889999999
Q ss_pred hcCCEEEEeCCCCCCCCCc-----cCCC--CeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchH
Q 013079 217 DKGVTVVVDNTFSPLVLSP-----ARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNP 289 (450)
Q Consensus 217 ~~gi~livD~~~~~~~~~~-----~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~ 289 (450)
++|+++|+||+|+++.... ..++ .|++ |++|.++ +|+|+ |++++++++++.+..... ..+..++.+.+
T Consensus 251 ~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~-~G~pi-g~v~~~~~i~~~~~~~~~-~~T~~g~~l~~ 325 (451)
T PRK06918 251 EHGILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLG-AGVPI-SGVIGRKEIMDESAPGEL-GGTYAGSPLGC 325 (451)
T ss_pred HcCCEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhc-CCCcc-EEEEEcHHHHhccCCCCc-CcCCCcCHHHH
Confidence 9999999999996663221 1223 6755 6999999 68999 999999888877643222 22344455555
Q ss_pred HHHHHHHccC--CcHHHHHHHHHHHHHHHHHHHHh
Q 013079 290 KVAFELSERI--PHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 290 ~~a~~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
.++...+..+ ..+.++ ..+..+++.+.|++
T Consensus 326 aaa~a~l~~i~~~~~~~~---~~~~g~~l~~~l~~ 357 (451)
T PRK06918 326 AAALAVLDIIEKENLNDR---AIELGKVVMNRFEE 357 (451)
T ss_pred HHHHHHHHHHHHCCHHHH---HHHHHHHHHHHHHH
Confidence 5544444322 223333 33444555555554
No 302
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.67 E-value=1.5e-14 Score=157.82 Aligned_cols=275 Identities=18% Similarity=0.185 Sum_probs=186.3
Q ss_pred hhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHh-ccC--CCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 99 PTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQL-CSS--GGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l-~~~--gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
+.+.+++..+|++.|.+ ++-++.+ +|++.++++.++ ..+ +++|++++.+|+.+...+...... .|++++.+
T Consensus 121 eal~~~Qt~la~LtG~~~anaSl~d~---aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~-~G~ev~~~ 196 (954)
T PRK05367 121 EALLNFQTMVADLTGLEIANASLLDE---ATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEP-LGIEVVVG 196 (954)
T ss_pred HHHHHHHHHHHHHHCCChhhcccccc---HHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHh-CCCEEEEe
Confidence 45678899999999976 4688889 898888777765 344 389999999999999888655554 79999998
Q ss_pred CCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCc-
Q 013079 174 DISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKF- 250 (450)
Q Consensus 174 ~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~- 250 (450)
+.++ + +..+++.++++.+| |.+|.+.|+++|+++||++|+++++|..+ ..+..+|.++|+|++++|.+|+
T Consensus 197 ~~~~--d----~~~~~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg 269 (954)
T PRK05367 197 DAAK--A----LDHDDVFGVLLQYP-GTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFG 269 (954)
T ss_pred cCcc--C----CCcccEEEEEEecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccC
Confidence 8653 1 21345666766665 67999999999999999999999999865 3344578889999999999999
Q ss_pred ----cccCccceEEEEEcCHHHHHHHHHHhhhh--------------------hhc-cCC----CchHHHHHHH-----H
Q 013079 251 ----ISGGADIIAGAVCGPANLVNSMMDLHQGA--------------------LML-LGP----TMNPKVAFEL-----S 296 (450)
Q Consensus 251 ----~g~~g~~igG~l~~~~~~~~~l~~~~~~~--------------------~~~-~g~----~~~~~~a~~~-----~ 296 (450)
+|||+ +|+++.++++...+....-++ .++ .+. +.....+..+ .
T Consensus 270 ~P~g~GGP~---aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~ 346 (954)
T PRK05367 270 VPMGFGGPH---AAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVY 346 (954)
T ss_pred CCCCCCCCC---EEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 77776 499998887765542110000 001 111 1111111111 1
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccc
Q 013079 297 ERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYA 376 (450)
Q Consensus 297 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~ 376 (450)
.+..-+....++...++.++++.|++.+.++..+. +...+.|.++. ...++.++|...
T Consensus 347 ~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~-------------------~f~~~~~~~~~--~~~~i~~~l~~~- 404 (954)
T PRK05367 347 HGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDS-------------------FFDTLTVEVGG--DAAAVLARALAA- 404 (954)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCC-------------------CCCeEEEeCCC--CHHHHHHHHHHC-
Confidence 12223444445567788888999977665543322 22367777652 255677776642
Q ss_pred cccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 377 QFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 377 ~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
| |-++ -+.++.||||+. ..+++++++.|.++|.
T Consensus 405 --g-i~~~---------------------------~~~~~~l~is~~-e~~t~~did~l~~~l~ 437 (954)
T PRK05367 405 --G-INLR---------------------------RVDDDHVGISLD-ETTTREDLAALLAVFG 437 (954)
T ss_pred --C-ceec---------------------------cccCCEEEEEec-ccCCHHHHHHHHHHHc
Confidence 2 1110 011467999999 9889999999999886
No 303
>PRK05965 hypothetical protein; Provisional
Probab=99.67 E-value=2.4e-14 Score=146.50 Aligned_cols=299 Identities=14% Similarity=0.207 Sum_probs=182.4
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhcc-------C-CCEEEEeCCCchhHHHHHHHhC---
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTHFF--- 162 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~~~--- 162 (450)
..++...+|.++|+++.. .+.++|++| |+||+..|++.... + ..+||.....||+.........
T Consensus 87 ~~~~~~~~lae~L~~~~p~~~~~v~f~~s---GSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~ 163 (459)
T PRK05965 87 FGSEPAIRLAAKLAERAPGSLNHVYFTLG---GSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALP 163 (459)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCC---hhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCc
Confidence 346777889999999874 467899999 99999999985421 2 2578999999988643211110
Q ss_pred --CCccCe---eEEEeCC---------CC--------HHHHHHhhhc---CCceEEEEecCCCCcccccC----HHHHHH
Q 013079 163 --PRACNI---TTTFVDI---------SD--------HEMVNSAIVQ---GRTKVLYFESISNPTLAVAN----IPELSR 213 (450)
Q Consensus 163 --~~~~g~---~v~~v~~---------~d--------~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~----l~~I~~ 213 (450)
...++. .+..++. +| ++++++.+.. +++.+|++|.++...|.+.+ +++|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~ 243 (459)
T PRK05965 164 AFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMRE 243 (459)
T ss_pred hhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHH
Confidence 000110 1122221 12 2567776631 56889999999988888754 889999
Q ss_pred HHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh------hhhh
Q 013079 214 LAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------QGAL 280 (450)
Q Consensus 214 la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------~~~~ 280 (450)
+|++||+++|+||+++++.. .-....+|+++ ++|.+++.-.++ |.++.++++.+.+.... .+..
T Consensus 244 lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~~Pi-~av~~~~~i~~~~~~~~~~~~~~~h~~ 320 (459)
T PRK05965 244 ACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT--VAKGLTSGYVPM-GAVLMSDHVYQGIADGAGAAAPVGHGY 320 (459)
T ss_pred HHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEE--echhhccCCcce-eEEEEcHHHHHHHhccccccccccccC
Confidence 99999999999999966631 11233578888 899999532478 77788888887764210 1122
Q ss_pred hccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 281 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 281 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+..|+.++..++...+..++. +...++..+..++|.+.|+++. + +|... +.+|.|.++.+++.
T Consensus 321 T~~gnpl~~Aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~l~~l~-~--~~~v~-------------~vrG~Gl~~gie~~ 383 (459)
T PRK05965 321 TYSAHPVSAAVGLEVLRLYHE-GGLLANGQKAGPRFAAGLDALR-A--HPLVG-------------DVRGRGLLGALELV 383 (459)
T ss_pred CCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhc-c--CCCEE-------------EEeecceEEEEEEe
Confidence 334444444444333322211 1123444566667777776542 1 22111 33478999999985
Q ss_pred CH-----------HHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC---CC
Q 013079 361 TE-----------EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY---LG 426 (450)
Q Consensus 361 ~~-----------~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~---~~ 426 (450)
.. ..+..+...+.. .|++....| ...||+...+ .+
T Consensus 384 ~~~~~~~~~~~~~~~~~~i~~~~~~---~Gll~~~~g----------------------------~~~i~~~PpL~it~~ 432 (459)
T PRK05965 384 ADKATKTPFDAALDPADRIFDRAYA---NGLVFRAFG----------------------------DGVLGFAPALCCTEG 432 (459)
T ss_pred ccccccCCCCchhHHHHHHHHHHHh---CCeEEEecC----------------------------CcEEEEECCCcCCHH
Confidence 21 123445555543 232211111 3568887331 57
Q ss_pred CHHHHHHHHHHHHHHhhhcCCC
Q 013079 427 TLDQRWSQFEKALSRMQDSGVF 448 (450)
Q Consensus 427 ~~~~~i~~l~~al~~~~~~~~~ 448 (450)
++++.++.|.++|.++.+.|+.
T Consensus 433 ei~~~~~~l~~~l~~~~~~~~~ 454 (459)
T PRK05965 433 EFDLIFERTRKTLDDVLADPDV 454 (459)
T ss_pred HHHHHHHHHHHHHHHHhcCcch
Confidence 7788888888888888766653
No 304
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.67 E-value=1.6e-14 Score=132.33 Aligned_cols=297 Identities=16% Similarity=0.190 Sum_probs=179.2
Q ss_pred ChhHHHHHHHHHHHhC----CCeEEEecChHHHHHHHHHHHHHhcc---CCC--EEEE-eCCCchhHHHHHH--HhCCCc
Q 013079 98 NPTVLNLSRQMAALEG----TEAAYCTASDKAGMSAISSVLMQLCS---SGG--HVVA-ARTLYGGTHALLT--HFFPRA 165 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g----~~~~~~tsg~~~gt~ai~~al~~l~~---~gd--~Vi~-~~~~y~~~~~~~~--~~~~~~ 165 (450)
.+.++.+.+.+.+-+| ++++.+|+| .+.+...++..+.. .|+ +|+. -.|+|-+|....- +.+..
T Consensus 77 ~~li~ala~~l~~~ygwnit~~NIalTnG---SQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs- 152 (417)
T COG3977 77 AVLIDALAKMLRREYGWNITAQNIALTNG---SQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVS- 152 (417)
T ss_pred hHHHHHHHHHHHHHhCCCCccceeeecCC---ccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceee-
Confidence 4556666666666666 357899999 88888887765532 243 4554 5688888765431 00000
Q ss_pred cCeeEEEeC------CCCHHHHHHhhhcCCceEEEEecCCCCccccc---CHHHHHHHHHhcCCEEEEeCCC-CCCC---
Q 013079 166 CNITTTFVD------ISDHEMVNSAIVQGRTKVLYFESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTF-SPLV--- 232 (450)
Q Consensus 166 ~g~~v~~v~------~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~-~~~~--- 232 (450)
..-++..++ ..|.++|. + .+++.+|++.-|.||||.+. .+.+|.++|++||++++.|++| -+|+
T Consensus 153 ~kP~iel~~~g~FKY~vDF~~l~--i-~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~ii 229 (417)
T COG3977 153 AKPNIELLPAGQFKYHVDFEHLH--I-GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGII 229 (417)
T ss_pred ccCCcccccccceeeccCHHHcc--c-ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCcee
Confidence 000111111 11667665 3 67899999999999999994 5889999999999999999999 4443
Q ss_pred CC---ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCc--HHH-HH
Q 013079 233 LS---PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPH--LGL-RM 306 (450)
Q Consensus 233 ~~---~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~--l~~-~~ 306 (450)
++ +.--.+.+.+.|+||. |.||.|+ |.+++++++++.+..+.. ......+.+.+..+..+....+- +.+ .+
T Consensus 230 fsd~~~~w~~NiilC~SLSK~-GLPG~R~-GIiIane~viqaitnmn~-iisLap~~~G~Aia~~mie~gdl~rlseqVI 306 (417)
T COG3977 230 FSDATPLWNENIILCMSLSKL-GLPGSRC-GIIIANEKVIQAITNMNG-IISLAPGRMGPAIAAEMIESGDLLRLSEQVI 306 (417)
T ss_pred cccccccCCCCEEEEeehhhc-CCCCcce-eEEEccHHHHHHHHhccc-eeeecCCCccHHHHHHHhhcchHHHHHHHhh
Confidence 22 2222578999999995 6699998 999999999998876644 22234445566666555443322 222 22
Q ss_pred HH-HHHHHHHHHHHHHhC-CC---eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhccccccc
Q 013079 307 KE-HCHRALIFARRMKKL-GL---KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQNYAQFGF 380 (450)
Q Consensus 307 ~~-~~~~~~~l~~~L~~~-~~---~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~~~~~l~~~~~~g~ 380 (450)
+- |+.+.+...+.|++. +. .+..|. ..-++|++|++ +-..+.+..+|+..+
T Consensus 307 rPFY~~~~q~~~~~l~~~lp~~~~~iHkpE-------------------GAIFlWLWf~dLPItt~~LYq~LKa~G---- 363 (417)
T COG3977 307 RPFYRNRVQTTIAILRRYLPEYRCLIHKPE-------------------GAIFLWLWFKDLPITTEELYQRLKARG---- 363 (417)
T ss_pred hHHHHHHHHHHHHHHHHhcCccceeeecCC-------------------cceeehhhhccCCCCHHHHHHHHHhCe----
Confidence 22 455556566666542 32 333332 12256777662 112456788887632
Q ss_pred cccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC--CCHHHHHHHHHHHHHHh
Q 013079 381 MAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL--GTLDQRWSQFEKALSRM 442 (450)
Q Consensus 381 i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~--~~~~~~i~~l~~al~~~ 442 (450)
+-+- |++...-.++. .....+.++|+|.- . +.++.-+..|.+.++++
T Consensus 364 vl~V----------PG~~FFpGl~~----ewpH~hqC~Rmn~~-~~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 364 VLMV----------PGHYFFPGLDK----EWPHTHQCMRMNYV-PEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred EEEe----------cccccCCCCCC----CCCCccceEEEecC-CCHHHHHHHHHHHHHHHHHH
Confidence 2222 33333222221 13334689999987 4 33444456666666554
No 305
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.67 E-value=1.5e-14 Score=146.52 Aligned_cols=265 Identities=17% Similarity=0.151 Sum_probs=171.4
Q ss_pred ccccCccccCCH-HHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCC-Ce--EEEecChHHHHHHHHHHHHHh
Q 013079 62 IEASATFTVMEP-ETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGT-EA--AYCTASDKAGMSAISSVLMQL 137 (450)
Q Consensus 62 i~~att~~~~~~-~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~-~~--~~~tsg~~~gt~ai~~al~~l 137 (450)
.....|.+.+.+ +.+...+....+.+ ..| ..+...-+++-..++++++. +. -+||+| ||+||.+++.+.
T Consensus 67 ~~~~~~~~~~~a~~~~~~~~~~nl~d~---~~~-p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~G---gTean~lal~aa 139 (460)
T COG0076 67 AGFCPTRVPPVAAELLVSALNKNLGDP---DES-PAAAELEERVVNMLSDLLGAPEEASGTFTSG---GTEANLLALLAA 139 (460)
T ss_pred EccCCCCCHHHHHHHHHHHHhhcCCCc---ccC-hhHHHHHHHHHHHHHHHhCCCCCCceEEEcC---hHHHHHHHHHHH
Confidence 333444444433 55555555544332 112 12233345556667777776 33 499999 999999988764
Q ss_pred cc-----C---C------CEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC------CHHHHHHhhhcCCceE--EEE
Q 013079 138 CS-----S---G------GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS------DHEMVNSAIVQGRTKV--LYF 195 (450)
Q Consensus 138 ~~-----~---g------d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~------d~~~l~~ai~~~~t~l--v~i 195 (450)
.. . + .+|+++...|.+....+. .+|++...++.+ |+++|++++ ++++.. |+.
T Consensus 140 r~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~-----~lG~~~~~v~~~~~~~~id~~~l~~~i-~~~t~~g~vV~ 213 (460)
T COG0076 140 RERWRKRALAESGKPGGKPNIVCSETAHFSFEKAAR-----YLGLGLRRVPTVPTDYRIDVDALEEAI-DENTIGGVVVG 213 (460)
T ss_pred HHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHH-----HhCCCceeEEeccCccccCHHHHHHHH-HhhccCceEEE
Confidence 21 1 1 169999999999988875 345555444332 899999999 777766 777
Q ss_pred ecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCC---c-----cCC-CCeEEEeCCCCccccCccceEEEE-EcC
Q 013079 196 ESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLS---P-----ARL-GADVVVHSISKFISGGADIIAGAV-CGP 265 (450)
Q Consensus 196 ~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~---~-----~~~-g~di~~~S~sK~~g~~g~~igG~l-~~~ 265 (450)
...+.++|.+.|+++|+++|+++++++|||++++++... + ..+ ++|-++.++||++..|-. . |++ +.+
T Consensus 214 ~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~-~-G~il~rd 291 (460)
T COG0076 214 TAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIG-C-GVVLFRD 291 (460)
T ss_pred EecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCC-c-eEEEEEC
Confidence 888999999999999999999999999999999665421 1 111 689999999999875433 4 555 556
Q ss_pred HHHHHHHHHHhhhhh--------hccCCCc--hHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCC-CeeeC-CC
Q 013079 266 ANLVNSMMDLHQGAL--------MLLGPTM--NPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLG-LKVLY-PG 331 (450)
Q Consensus 266 ~~~~~~l~~~~~~~~--------~~~g~~~--~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~-p~ 331 (450)
++...+.......+. ...+.-+ ....++..++ +.+.+.+..++..++++++.+.|++.+ +++.. |.
T Consensus 292 ~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~ 371 (460)
T COG0076 292 EEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPE 371 (460)
T ss_pred HHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc
Confidence 633333322211110 0111111 2233344333 346677778888999999999999987 45443 33
Q ss_pred CCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013079 332 LEDHPHHELLKSMANKEYGFGGLLCLDMET 361 (450)
Q Consensus 332 ~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 361 (450)
.++++|++++
T Consensus 372 --------------------l~~V~fr~~~ 381 (460)
T COG0076 372 --------------------LPIVAFRLKD 381 (460)
T ss_pred --------------------cceEEEEcCC
Confidence 3389999864
No 306
>PRK12403 putative aminotransferase; Provisional
Probab=99.67 E-value=2.3e-14 Score=146.67 Aligned_cols=242 Identities=14% Similarity=0.140 Sum_probs=144.0
Q ss_pred CChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhc-------cCCC-EEEEeCCCchhHHHHHHHhCC---
Q 013079 97 FNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLC-------SSGG-HVVAARTLYGGTHALLTHFFP--- 163 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~-------~~gd-~Vi~~~~~y~~~~~~~~~~~~--- 163 (450)
.++...++.++|+++.+ .+.++|++| |++|+..|++... ++++ .|+.....||+..........
T Consensus 96 ~~~~~~~lae~L~~~~p~~~~~v~f~~S---GseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~ 172 (460)
T PRK12403 96 THPAVIELSELLFSLLPGHYSHAIYTNS---GSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKF 172 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCC---cHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCcc
Confidence 46778899999999986 468999999 9999999998653 1223 355556677775322111000
Q ss_pred -CccC---eeEEEeCCC-----------------CHHHHHHhhhc---CCceEEEEecCCCCcccccC----HHHHHHHH
Q 013079 164 -RACN---ITTTFVDIS-----------------DHEMVNSAIVQ---GRTKVLYFESISNPTLAVAN----IPELSRLA 215 (450)
Q Consensus 164 -~~~g---~~v~~v~~~-----------------d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~----l~~I~~la 215 (450)
+..+ ..+..++.. +++++++.+.+ +++.+|++|.+....|.+.+ +++|.++|
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc 252 (460)
T PRK12403 173 MHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRIC 252 (460)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 0000 012223211 12456555522 46789999999988898877 99999999
Q ss_pred HhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh---hhhhccCC
Q 013079 216 HDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ---GALMLLGP 285 (450)
Q Consensus 216 ~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~---~~~~~~g~ 285 (450)
++||+++|+||+++++.. .-..+..|+++ ++|.+++.-.++ |.+++++++.+.+..... +..+..|+
T Consensus 253 ~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~~Pi-ga~v~~~~i~~~~~~~~~~~~~~~T~~gn 329 (460)
T PRK12403 253 RQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGYVPM-GGLVLSKRIAEALVEQGGVFAHGLTYSGH 329 (460)
T ss_pred HHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--Ecccccccccce-EEEEECHHHHHHHhcCCCccccCCCCCCC
Confidence 999999999999966531 22223478887 999999532377 666677788776642111 11122333
Q ss_pred CchHHHHHHHHccCCcHHHHHHHHH-HHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 286 TMNPKVAFELSERIPHLGLRMKEHC-HRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 286 ~~~~~~a~~~~~~~~~l~~~~~~~~-~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
.+...++.+.++.++.. ...++.. ++.++|.+.|++...+....+ +.+|.|.++.+++.
T Consensus 330 Pl~~Aaala~L~~i~~~-~l~~~~~~~~g~~l~~~L~~l~~~~~~i~---------------~vrG~Gl~~gie~~ 389 (460)
T PRK12403 330 PVAAAVAIANLKALRDE-GVVTRVKDDTGPYLQRCLREVFGDHPLVG---------------EVQGAGLVAALQFA 389 (460)
T ss_pred HHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHhcCCCEE---------------eEeecceEEEEEEc
Confidence 33333333333322211 1233443 455666666654311110011 33478999999985
No 307
>PRK06541 hypothetical protein; Provisional
Probab=99.66 E-value=3.5e-14 Score=145.18 Aligned_cols=239 Identities=16% Similarity=0.181 Sum_probs=151.3
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhcc----C----CCEEEEeCCCchhHHHHHHHh----
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLCS----S----GGHVVAARTLYGGTHALLTHF---- 161 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~~----~----gd~Vi~~~~~y~~~~~~~~~~---- 161 (450)
+.++...++.++|+++.. .+.++|++| |+||+..|++.... . ..+|+.....||+........
T Consensus 92 ~~~~~~~~la~~l~~~~p~~~~~v~f~~s---GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~ 168 (460)
T PRK06541 92 YAHPPAIELAERLAALAPGDLNRVFFTTG---GSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLP 168 (460)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEcCC---cHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCCh
Confidence 456778889999999864 367899999 99999999985421 1 357898888888865432111
Q ss_pred ------CCCccCeeEEEeCC----------CC--------HHHHHHhhh---cCCceEEEEecCCCCcccccC----HHH
Q 013079 162 ------FPRACNITTTFVDI----------SD--------HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPE 210 (450)
Q Consensus 162 ------~~~~~g~~v~~v~~----------~d--------~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~~ 210 (450)
.+...| +..++. ++ ++.+++.+. ..++.+|+++.++++.|.+.+ +++
T Consensus 169 ~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~ 246 (460)
T PRK06541 169 AFKAPFEPLVPG--GFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFER 246 (460)
T ss_pred hhccccCCCCCC--cEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHH
Confidence 110012 222221 12 356777763 245788999999999999987 999
Q ss_pred HHHHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCcc-ceEEEEEcCHHHHHHHHHHhh---hh
Q 013079 211 LSRLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGAD-IIAGAVCGPANLVNSMMDLHQ---GA 279 (450)
Q Consensus 211 I~~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~-~igG~l~~~~~~~~~l~~~~~---~~ 279 (450)
|.++|+++|+++|+||+++++.. ....+..|+++ ++|.++ .|+ ++ |+++.++++++.+..... +.
T Consensus 247 l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~-~G~~pi-gav~~~~~i~~~~~~~~~~~~~~ 322 (460)
T PRK06541 247 VREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGIT-SGYSPL-GAMIASDRLFEPFLDGPTMFLHG 322 (460)
T ss_pred HHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--eccccc-CCccce-eEEEEcHHHHHHhhcCCCccccC
Confidence 99999999999999999965531 11223478876 999999 465 77 778888888877643211 01
Q ss_pred hhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013079 280 LMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 359 (450)
Q Consensus 280 ~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 359 (450)
.+..++.+...++...+..++. +...++..++.++|.+.|+++.. +|... +.+|.|.++.++|
T Consensus 323 ~T~~gnp~~~aaala~l~~l~~-~~~~~~~~~~g~~l~~~L~~l~~---~~~v~-------------~vrg~Gl~~~ie~ 385 (460)
T PRK06541 323 YTFGGHPVSAAVALANLDIFER-EGLLDHVRDNEPAFRATLEKLLD---LPIVG-------------DVRGDGYFYGIEL 385 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHhhc---CCCeE-------------EEEecceEEEEEE
Confidence 1122333332233222222211 12345667777888888876521 11100 2236888999998
Q ss_pred C
Q 013079 360 E 360 (450)
Q Consensus 360 ~ 360 (450)
.
T Consensus 386 ~ 386 (460)
T PRK06541 386 V 386 (460)
T ss_pred e
Confidence 4
No 308
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=2.8e-14 Score=145.79 Aligned_cols=297 Identities=15% Similarity=0.177 Sum_probs=174.1
Q ss_pred CCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHH-HHHHhC----CCc
Q 013079 95 RHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHA-LLTHFF----PRA 165 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~-~~~~~~----~~~ 165 (450)
+..++...+|.++|+++.+. +.++|++| |+||+.+|++... ....+|++....||+... .+.... ...
T Consensus 109 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~s---GseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~ 185 (459)
T PRK06082 109 RFTNETAIECAEKLTEIAGGELNRVLFAPG---GTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQG 185 (459)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEECCC---cHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccC
Confidence 45678889999999999853 57899999 9999999997542 223678888888887542 221000 000
Q ss_pred cC---eeEEEeCC--------CC--------HHHHHHhhhc-CCceEEEEecCCCCcccccC---HHHHHHHHHhcCCEE
Q 013079 166 CN---ITTTFVDI--------SD--------HEMVNSAIVQ-GRTKVLYFESISNPTLAVAN---IPELSRLAHDKGVTV 222 (450)
Q Consensus 166 ~g---~~v~~v~~--------~d--------~~~l~~ai~~-~~t~lv~i~~~~NptG~v~~---l~~I~~la~~~gi~l 222 (450)
++ ..+..++. .+ ++.+++.+.. +++.+|++|.+++..+.+.| +++|.++|++||+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~ll 265 (459)
T PRK06082 186 MGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLL 265 (459)
T ss_pred CCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 00 01222221 11 3457777632 46789999999887444455 899999999999999
Q ss_pred EEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHH
Q 013079 223 VVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFEL 295 (450)
Q Consensus 223 ivD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~ 295 (450)
|+||+++++.. ......+|+++ ++|.+++...++ |.++.++++.........+ .+..|+.++..++...
T Consensus 266 I~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P~-~av~~~~~i~~~~~~~~~~-~T~~gnpl~~aaa~a~ 341 (459)
T PRK06082 266 IIDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVPI-AAMITKDKYNTAAQISLGH-YTHEKSPLGCAAALAT 341 (459)
T ss_pred EEechhhCCCccchhhHhHhhCCCCCEEE--ecccccCCCCcc-eEEEEcHHHHhhccCCCCC-CCCCcCHHHHHHHHHH
Confidence 99999865532 11223578887 899999643577 7777776665432111111 1234444443333333
Q ss_pred HccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-H-------HHHHH
Q 013079 296 SERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET-E-------EKANR 367 (450)
Q Consensus 296 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~-~-------~~~~~ 367 (450)
+..++. +...++..++.++|.+.|+++..+...+. +.+|.|.++.+++.. . +.+..
T Consensus 342 L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~---------------~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~ 405 (459)
T PRK06082 342 IEVIEQ-EGLLEKVKADSQFMRERLLEMKAKYPLIG---------------DVRGIGLLWGVELVTDRHTKERAYDEAEA 405 (459)
T ss_pred HHHHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCee---------------eeeeccceeEEEEccCccccCccHHHHHH
Confidence 332221 12344556666677777765321110111 334789999999852 1 12334
Q ss_pred HHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC---CCCHHHHHHHHHHHHHHhhh
Q 013079 368 LMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY---LGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 368 ~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~---~~~~~~~i~~l~~al~~~~~ 444 (450)
++..+.. .|++. . + + ..+.|||+..+ .+++++.++.|.++|.++.+
T Consensus 406 ~~~~~~~---~Gvl~-~----------~-~----------------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 406 VLYRCLN---NGLSF-K----------V-S----------------QGNVIQLSPPLIITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred HHHHHHh---CCCEE-E----------e-c----------------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence 4444432 23211 1 0 0 13568888651 36677777777777777644
Q ss_pred c
Q 013079 445 S 445 (450)
Q Consensus 445 ~ 445 (450)
.
T Consensus 455 ~ 455 (459)
T PRK06082 455 D 455 (459)
T ss_pred h
Confidence 3
No 309
>PRK07678 aminotransferase; Validated
Probab=99.66 E-value=4e-14 Score=144.62 Aligned_cols=255 Identities=11% Similarity=0.105 Sum_probs=155.8
Q ss_pred CCChhHHHHHHHHHHHhCC-CeEEEecChHHHHHHHHHHHHHhcc-------CC-CEEEEeCCCchhHHHHHHHh-----
Q 013079 96 HFNPTVLNLSRQMAALEGT-EAAYCTASDKAGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHF----- 161 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~-~~~~~tsg~~~gt~ai~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~----- 161 (450)
..++...++.++|+++.+. +.++|++| |+||+..|++.... +| .+||.....||+........
T Consensus 86 ~~~~~~~~lae~l~~~~~~~~~v~f~~s---GseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~ 162 (451)
T PRK07678 86 QSHEPAIKLAEKLNEWLGGEYVIFFSNS---GSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQ 162 (451)
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcc
Confidence 4567778899999998754 46899999 99999999985421 23 57898888898865332111
Q ss_pred -----CCCccCeeEEEeCCC--------------C---HHHHHHhhh---cCCceEEEEecCCCCcccccC----HHHHH
Q 013079 162 -----FPRACNITTTFVDIS--------------D---HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELS 212 (450)
Q Consensus 162 -----~~~~~g~~v~~v~~~--------------d---~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~~I~ 212 (450)
.+...| +.+++.. | ++.+++.+. .+++.+|++|.++...|.+.+ +++|.
T Consensus 163 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr 240 (451)
T PRK07678 163 RKYKYEPLAPG--FLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVK 240 (451)
T ss_pred cccccCCCCCC--CEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHH
Confidence 110012 2222211 1 223555562 257899999999888888865 89999
Q ss_pred HHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh-----hhhh
Q 013079 213 RLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH-----QGAL 280 (450)
Q Consensus 213 ~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~-----~~~~ 280 (450)
++|++||+++|+||+++++.. .-..+.+|+++ ++|.+++...++ |.+++++++++.+.... .+..
T Consensus 241 ~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lggG~~Pi-~av~~~~~i~~~~~~~~~~~~~~h~~ 317 (451)
T PRK07678 241 EICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITSAYLPL-SATAVKKEIYEAFKGKGEYEHFRHVN 317 (451)
T ss_pred HHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eecccccCCcce-eEEEEcHHHHHHHhccCcccccccCC
Confidence 999999999999999966632 11233578887 899999644678 88888888887764311 1122
Q ss_pred hccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 281 MLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 281 ~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+..|+.+...++...+..++. +...++..++.++|.+.|++.-.+...+. +.+|.|.++.+++.
T Consensus 318 T~~gnp~~~aaa~a~l~~l~~-~~~~~~~~~~g~~l~~~l~~~~~~~~~v~---------------~vrg~Gl~~~i~~~ 381 (451)
T PRK07678 318 TFGGNPAACALALKNLEIMEN-ENLIERSAQLGELLLEQLKEELGEHPLVG---------------DIRGKGLLVGIELV 381 (451)
T ss_pred CCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHhcCCCEE---------------EEEeeceEEEEEEe
Confidence 344444444444443332221 11233444555566666643210100011 22378889999984
Q ss_pred C---------HHHHHHHHHHhhc
Q 013079 361 T---------EEKANRLMNYLQN 374 (450)
Q Consensus 361 ~---------~~~~~~~~~~l~~ 374 (450)
. ...+..+...+..
T Consensus 382 ~~~~~~~~~~~~~a~~i~~~l~~ 404 (451)
T PRK07678 382 NDKETKEPADNDKVASVVAACKE 404 (451)
T ss_pred cCCcccCcCchHHHHHHHHHHHH
Confidence 1 1234556666654
No 310
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.66 E-value=3.1e-14 Score=154.67 Aligned_cols=276 Identities=19% Similarity=0.154 Sum_probs=182.0
Q ss_pred hhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHh-ccCC--CEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 99 PTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQL-CSSG--GHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l-~~~g--d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
+.+.+++..||++.|.+ ++-++.+ +|++.++++.++ +.+| ++|++++.+|+.+...+.....+ .|++++.+
T Consensus 148 qal~~~Qt~ia~LtG~~~anaSL~d~---aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~-~GieV~~v 223 (993)
T PLN02414 148 ESLLNYQTMITDLTGLPMSNASLLDE---GTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADG-LGLEVVVA 223 (993)
T ss_pred HHHHHHHHHHHHHhCCChhhEeecCC---hHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhh-cCCEEEEe
Confidence 34678999999999975 4789999 999999887765 3434 78999999999999988766555 79999998
Q ss_pred CCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCC-CccCCCCeEEEeCCCCc
Q 013079 174 DISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVL-SPARLGADVVVHSISKF 250 (450)
Q Consensus 174 ~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~-~~~~~g~di~~~S~sK~ 250 (450)
+.++.+ .. .+.+..+++.+| |.+|.+.|+++|+++||++|+++++ .++ +-... +|.++|+|+++++.+||
T Consensus 224 ~~~~~~----~~-~~~v~~vlvq~P-~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKw 296 (993)
T PLN02414 224 DEKDFD----YS-SGDVCGVLVQYP-ATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRF 296 (993)
T ss_pred cchhhc----cc-cCceEEEEEecC-CCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCcc
Confidence 764322 22 334545555444 4599999999999999999999999 444 32333 57788999999999999
Q ss_pred c-----ccCccceEEEEEcCHHHHHHHHH----H----------------hhhhhhc-cCCCch----HHHHHH-----H
Q 013079 251 I-----SGGADIIAGAVCGPANLVNSMMD----L----------------HQGALML-LGPTMN----PKVAFE-----L 295 (450)
Q Consensus 251 ~-----g~~g~~igG~l~~~~~~~~~l~~----~----------------~~~~~~~-~g~~~~----~~~a~~-----~ 295 (450)
. |||. +|+++.++++...+-. + +.+..++ .+.... ...+.+ .
T Consensus 297 g~P~G~GGP~---aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~ 373 (993)
T PLN02414 297 GVPMGYGGPH---AAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 373 (993)
T ss_pred ccCCCCCCCC---eeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHH
Confidence 8 4443 4999888776543311 0 0000000 111111 111111 1
Q ss_pred HccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcc
Q 013079 296 SERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNY 375 (450)
Q Consensus 296 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~ 375 (450)
..+..-+.+..++..+++.++.+.|++.|.++..+. +-..+.|.++.. .++.++|...
T Consensus 374 ~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~-------------------~f~~vt~~~~~~---~~v~~~L~~~ 431 (993)
T PLN02414 374 YHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLP-------------------FFDTVKVKCSDA---DAIADAAAKV 431 (993)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCC-------------------CcCeEEEecCCH---HHHHHHHHHC
Confidence 111233444445667788889999987765543321 223788887632 4566666542
Q ss_pred ccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 376 AQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 376 ~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
+ | .++ .+.++.||+|+. ..+++++|+.|.++|...
T Consensus 432 g----I--~l~-------------------------~~~~~~lrvs~~-e~~T~edId~L~~~l~~~ 466 (993)
T PLN02414 432 G----I--NLR-------------------------VVDANTVTVSFD-ETTTLEDVDKLFKVFAGG 466 (993)
T ss_pred C----C--eeE-------------------------EecCCeEEEEee-ccCCHHHHHHHHHHHccc
Confidence 2 2 111 011356999999 999999999999999744
No 311
>PLN02590 probable tyrosine decarboxylase
Probab=99.66 E-value=1.5e-13 Score=141.47 Aligned_cols=219 Identities=13% Similarity=0.123 Sum_probs=141.9
Q ss_pred HHHHHHHHHHhCCCe---------EEEecChHHHHHHHHHHHHHhcc----C-C-----C-EEEEeCCCchhHHHHHHHh
Q 013079 102 LNLSRQMAALEGTEA---------AYCTASDKAGMSAISSVLMQLCS----S-G-----G-HVVAARTLYGGTHALLTHF 161 (450)
Q Consensus 102 ~~l~~~iA~l~g~~~---------~~~tsg~~~gt~ai~~al~~l~~----~-g-----d-~Vi~~~~~y~~~~~~~~~~ 161 (450)
+.+-+.+++++|.+. -+||+| ||+|+..++.+... . | + .|.+++..|.++...+.
T Consensus 173 ~~vi~wl~~l~glp~~~~~~~~~gG~~~sG---gSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~-- 247 (539)
T PLN02590 173 IIVLDWLAKLLQLPDHFLSTGNGGGVIQGT---GCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL-- 247 (539)
T ss_pred HHHHHHHHHHhCCCcccccCCCCceEEcCc---hHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH--
Confidence 445556777777542 589999 99999888765321 0 1 2 45567888998888775
Q ss_pred CCCccCe---eEEEeCCC-------CHHHHHHhhhcC-----CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeC
Q 013079 162 FPRACNI---TTTFVDIS-------DHEMVNSAIVQG-----RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDN 226 (450)
Q Consensus 162 ~~~~~g~---~v~~v~~~-------d~~~l~~ai~~~-----~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~ 226 (450)
++|+ .++.|+.+ |+++|+++|... .+-+|+.+..+-.+|.+.|+++|+++|+++|+++|||+
T Consensus 248 ---ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDa 324 (539)
T PLN02590 248 ---IGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDA 324 (539)
T ss_pred ---HcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEec
Confidence 2343 34444432 899999998321 24466666778889999999999999999999999999
Q ss_pred CCCCCC-CCcc----CC---CCeEEEeCCCCccccCccceEEEE-EcCHH-HHHHHHH---Hhh-h------------hh
Q 013079 227 TFSPLV-LSPA----RL---GADVVVHSISKFISGGADIIAGAV-CGPAN-LVNSMMD---LHQ-G------------AL 280 (450)
Q Consensus 227 ~~~~~~-~~~~----~~---g~di~~~S~sK~~g~~g~~igG~l-~~~~~-~~~~l~~---~~~-~------------~~ 280 (450)
+|++.. ..+. .. .+|-++.+.||++..|-. . |++ +.++. +.+.+.. +.. . +.
T Consensus 325 A~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~-c-g~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~ 402 (539)
T PLN02590 325 AYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQT-C-SPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQ 402 (539)
T ss_pred chhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcC-E-EEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccC
Confidence 995543 2221 11 479999999999986654 3 555 44443 3332211 110 0 00
Q ss_pred hccCCCchHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCC
Q 013079 281 MLLGPTMNPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYP 330 (450)
Q Consensus 281 ~~~g~~~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p 330 (450)
...+-.......|..++ +.+.+.+++++..++++++.+.|++.+. ++..|
T Consensus 403 i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~ 455 (539)
T PLN02590 403 ISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT 455 (539)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Confidence 01111123344444444 4456788889999999999999988764 55443
No 312
>PRK07481 hypothetical protein; Provisional
Probab=99.65 E-value=1e-13 Score=141.59 Aligned_cols=241 Identities=15% Similarity=0.188 Sum_probs=149.8
Q ss_pred CCChhHHHHHHHHHHHhC---CCeEEEecChHHHHHHHHHHHHHhcc-------CC-CEEEEeCCCchhHHHHHHH----
Q 013079 96 HFNPTVLNLSRQMAALEG---TEAAYCTASDKAGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTH---- 160 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g---~~~~~~tsg~~~gt~ai~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~---- 160 (450)
..++...++.++|+++.+ .+.++|++| |+||+..|++.... +| .+|+.....||+.......
T Consensus 83 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~s---GsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~ 159 (449)
T PRK07481 83 TTHPRAIELSYELIDMFAPEGMRRVFFSSG---GSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGN 159 (449)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEEcCc---hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCC
Confidence 457888889999999873 467899999 99999999985421 23 5799999999885432111
Q ss_pred ------hCCCccCeeEEEeCC----------CCHHH--------HHHhhh---cCCceEEEEecCCCCcccccC----HH
Q 013079 161 ------FFPRACNITTTFVDI----------SDHEM--------VNSAIV---QGRTKVLYFESISNPTLAVAN----IP 209 (450)
Q Consensus 161 ------~~~~~~g~~v~~v~~----------~d~~~--------l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~ 209 (450)
+.+...| +..++. .|++. +++.+. .+++.+|++|.++...|.+.+ ++
T Consensus 160 ~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~ 237 (449)
T PRK07481 160 TVFRRNYEPLLPG--CFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWP 237 (449)
T ss_pred cccccccCCCCCC--CEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHH
Confidence 0111012 222211 13333 334341 256899999999988888765 89
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh------
Q 013079 210 ELSRLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------ 276 (450)
Q Consensus 210 ~I~~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------ 276 (450)
+|.++|+++|+++|.||+++++.. ......+|+++ ++|.+++.-.++ |.+++++++.+.+....
T Consensus 238 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~~Pi-~av~~~~~i~~~~~~~~~~~~~~ 314 (449)
T PRK07481 238 LVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITSGYVPL-GATMVNARIADAFEANADFGGAI 314 (449)
T ss_pred HHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccCCCcCc-eEEEEcHHHHHHHhccCcccccc
Confidence 999999999999999999866532 22233578888 899998532477 77888888887764311
Q ss_pred hhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013079 277 QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLC 356 (450)
Q Consensus 277 ~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 356 (450)
.+..+..|+.+...++...+..++. ....++..+..++|.+.|+++..+..... +.+|.|.++.
T Consensus 315 ~h~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~---------------~vrG~Glm~g 378 (449)
T PRK07481 315 MHGYTYSGHPVACAAALATLDIVVR-EDLPANAAKRGAYLLEGLQPLKERFELVG---------------DVRGKGLMLA 378 (449)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhhcCCCeE---------------EEeecceEEE
Confidence 1122334444444444333332221 12334455556667667665321110111 2347889999
Q ss_pred EEeC
Q 013079 357 LDME 360 (450)
Q Consensus 357 ~~l~ 360 (450)
+++.
T Consensus 379 i~l~ 382 (449)
T PRK07481 379 LDLV 382 (449)
T ss_pred EEec
Confidence 9984
No 313
>PRK06062 hypothetical protein; Provisional
Probab=99.65 E-value=4.2e-14 Score=144.34 Aligned_cols=244 Identities=14% Similarity=0.197 Sum_probs=148.1
Q ss_pred CCCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhC--------
Q 013079 95 RHFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF-------- 162 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~-------- 162 (450)
...++...++.++|+++.. .+.++|++| |+||+..|++... ....+||.....||+.........
T Consensus 91 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~S---GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~ 167 (451)
T PRK06062 91 AHANDARSEAARLIAERAPGDLSKVFFTNG---GADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPN 167 (451)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCC---hHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccC
Confidence 4567788899999999874 468999999 9999999998542 223578888888888653321110
Q ss_pred -CCccCeeEEEeCC---------CC-------HHHHHHhhhc---CCceEEEEecCCCCcccccC----HHHHHHHHHhc
Q 013079 163 -PRACNITTTFVDI---------SD-------HEMVNSAIVQ---GRTKVLYFESISNPTLAVAN----IPELSRLAHDK 218 (450)
Q Consensus 163 -~~~~g~~v~~v~~---------~d-------~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~ 218 (450)
+...|+.....+. .| ++++++.+.. +++.+|++|.+....|.+.| +++|.++|+++
T Consensus 168 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~ 247 (451)
T PRK06062 168 DTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH 247 (451)
T ss_pred CCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc
Confidence 0001211111110 12 5667777731 46789999999988898887 99999999999
Q ss_pred CCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh-hhhhhccCCCchHH
Q 013079 219 GVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH-QGALMLLGPTMNPK 290 (450)
Q Consensus 219 gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~-~~~~~~~g~~~~~~ 290 (450)
|+++|+||+++++.. ....+.+|+++ ++|.+++.-.++ |.++.++++++.+.... .+..++.|+.+...
T Consensus 248 g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t--~gK~lggG~~Pi-gav~~~~~i~~~~~~~~~~~~~T~~gnpl~~A 324 (451)
T PRK06062 248 GIVLIADEVMAGFGRTGKWFAIEHFGVVPDLIT--FAKGVNSGYVPL-GGVAISEAIAATFADRPYPGGLTYSGHPLACA 324 (451)
T ss_pred CCEEEeeccccCCCcCcHHHHHHhcCCCCCeee--echhhhcCCcCc-EEEEEcHHHHHHhccCCCCCCCCCCCCHHHHH
Confidence 999999999966632 11223578776 899999532367 66777778887764211 11223444433333
Q ss_pred HHHHHHccCCcHHHHHHHHHHHH-HHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 291 VAFELSERIPHLGLRMKEHCHRA-LIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 291 ~a~~~~~~~~~l~~~~~~~~~~~-~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
++...+..++.. ...++..+.. +++.+.|+++..+ +|... +.+|.|.++.+++.
T Consensus 325 aa~a~L~~l~~~-~l~~~~~~~G~~~l~~~L~~l~~~--~~~v~-------------~vrG~Gl~~gve~~ 379 (451)
T PRK06062 325 AAVATINAMEEE-GIVENAARIGAEVLGPGLRELAER--HPSVG-------------EVRGLGVFWALELV 379 (451)
T ss_pred HHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhc--CCcEE-------------eEeccccEEEEEEc
Confidence 333333222111 1223333333 3555556543111 11100 22368889999885
No 314
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.65 E-value=4.6e-14 Score=143.78 Aligned_cols=289 Identities=12% Similarity=0.133 Sum_probs=173.9
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhcc-------C-CCEEEEeCCCchhHHHHHH------
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLT------ 159 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~------ 159 (450)
..++...++.++|+++.. .+.++|++| |+||+..|++.... + ..+||.....||+......
T Consensus 89 ~~~~~~~~la~~L~~~~p~~~~~v~f~~s---GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~ 165 (445)
T PRK09221 89 MGHPLAFELAERLAELAPGGLDHVFFTNS---GSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIV 165 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCCh
Confidence 356778889999999874 368999999 99999999985421 1 2479998999988642211
Q ss_pred ---H-hCCCccCeeEEEeCCC------------------CHHHHHHhhh---cCCceEEEEecCCCCcccccC----HHH
Q 013079 160 ---H-FFPRACNITTTFVDIS------------------DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPE 210 (450)
Q Consensus 160 ---~-~~~~~~g~~v~~v~~~------------------d~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~~ 210 (450)
. +.+. ...+..++.. .++++++.+. .+++.+|++|.+....|.+.| +++
T Consensus 166 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~ 243 (445)
T PRK09221 166 NNRKMFGGL--LPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQR 243 (445)
T ss_pred hhhhccCCC--CCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHH
Confidence 0 0010 0112222221 1356666663 146889999999999999988 999
Q ss_pred HHHHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh------h
Q 013079 211 LSRLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------Q 277 (450)
Q Consensus 211 I~~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------~ 277 (450)
|.++|+++|+++|+||+++++.. .-.....|+++ ++|.+++...++ |.++.++++++.+.... .
T Consensus 244 l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~--~gK~l~gG~~Pi-~av~~~~~i~~~~~~~~~~~~~~~ 320 (445)
T PRK09221 244 LREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIIT--FAKGLTNGAIPM-GAVIASDEIYDAFMQGPEYAIEFF 320 (445)
T ss_pred HHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEE--eccccccCcccc-eeeEEcHHHHHhhccCcccccccc
Confidence 99999999999999999855531 11223458776 999998544567 77788888877664210 0
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEE
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCL 357 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~ 357 (450)
+..+..++.+...++...+..++. ....++..++.+++.+.|+++.. +|.+. +.+|.|.+..+
T Consensus 321 ~~~T~~~~pl~~aaa~a~L~~i~~-~~l~~~~~~~g~~l~~~l~~l~~---~~~v~-------------~vrg~Gl~~~v 383 (445)
T PRK09221 321 HGYTYSAHPVACAAGLATLDIYRE-EDLFERAAELAPYFEDAVHSLKG---LPHVI-------------DIRNIGLVAGI 383 (445)
T ss_pred cccCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhhcc---CCCEE-------------EEecCceEEEE
Confidence 111233433333333333322211 12345566677777777776521 11110 22367888888
Q ss_pred EeCCH-----HHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHH
Q 013079 358 DMETE-----EKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRW 432 (450)
Q Consensus 358 ~l~~~-----~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i 432 (450)
++... ..+..+...+.. .| +.+..+ .+.|||+.. ...+++.+
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~---~G-v~~~~~----------------------------~~~lr~~Pp-l~~t~~ei 430 (445)
T PRK09221 384 ELAPRPGAPGARGYEAFMKCFE---KG-LLVRYT----------------------------GDTIALSPP-LIIEKAQI 430 (445)
T ss_pred EEecccccccchHHHHHHHHHH---CC-eEEeec----------------------------CCEEEEECC-ccCCHHHH
Confidence 87521 123445555543 23 221110 256999977 65555556
Q ss_pred HHHHHHHHHh
Q 013079 433 SQFEKALSRM 442 (450)
Q Consensus 433 ~~l~~al~~~ 442 (450)
+.+.++|++.
T Consensus 431 d~~~~~l~~~ 440 (445)
T PRK09221 431 DELVDALGDA 440 (445)
T ss_pred HHHHHHHHHH
Confidence 6655555443
No 315
>PRK07482 hypothetical protein; Provisional
Probab=99.65 E-value=2.2e-14 Score=146.74 Aligned_cols=242 Identities=10% Similarity=0.110 Sum_probs=149.8
Q ss_pred CCCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhc------c-C-CCEEEEeCCCchhHHHHHHH----
Q 013079 95 RHFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLC------S-S-GGHVVAARTLYGGTHALLTH---- 160 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~------~-~-gd~Vi~~~~~y~~~~~~~~~---- 160 (450)
...++...+|.++|+++.. .+.++|++| |+||+..|++... . + ..+||.....||+.......
T Consensus 90 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~~s---GSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~ 166 (461)
T PRK07482 90 GHGTEASITLSKRIIDRAPAGMSKVYYGLS---GSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGL 166 (461)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCc---hHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCC
Confidence 3457788889999999874 467899999 9999999998652 1 2 35788888899885322110
Q ss_pred ------hCCCccCeeEEEeCCC------------------CHHHHHHhhh---cCCceEEEEecCCCCcccccC----HH
Q 013079 161 ------FFPRACNITTTFVDIS------------------DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IP 209 (450)
Q Consensus 161 ------~~~~~~g~~v~~v~~~------------------d~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~ 209 (450)
+.+...+ +..++.+ +++++++.+. .+++.+|++|.++...|.+.+ ++
T Consensus 167 ~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~ 244 (461)
T PRK07482 167 SLFHQHFDLPIAR--VLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWP 244 (461)
T ss_pred chhhhccCCCCCC--CEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHH
Confidence 1110011 1222111 3567777773 246899999999888888754 88
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh------
Q 013079 210 ELSRLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------ 276 (450)
Q Consensus 210 ~I~~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------ 276 (450)
+|.++|++||+++|+||+++++.. .-....+|+++ ++|.+++.-.++ |.++.++++.+.+....
T Consensus 245 ~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~~Pi-~av~~~~~i~~~~~~~~~~~~~~ 321 (461)
T PRK07482 245 AIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTSAYAPL-SGSIVGEKVWDVLEQGSDEHGAI 321 (461)
T ss_pred HHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--EccccccCcccc-ceeeecHHHHHHHhcccccCCcc
Confidence 999999999999999999966632 12233579998 899998532377 66777777777664211
Q ss_pred hhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEE
Q 013079 277 QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLC 356 (450)
Q Consensus 277 ~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~ 356 (450)
.+..+..|+.++..++...+..++. +...++..+..++|.+.|++.-.+..... +.+|.|.++.
T Consensus 322 ~h~~T~~gnpl~~Aaa~a~L~~~~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~v~---------------~vrG~Glm~g 385 (461)
T PRK07482 322 GHGWTYSGHPICAAAALANLDILER-ENLVGNAAEVGAYFRARLRAAFGDHPLVG---------------EVRGVGMLAA 385 (461)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHhcCCCEE---------------EEeeceeEEE
Confidence 1122334444444444443332211 11233345555666666654311100001 2347889999
Q ss_pred EEeC
Q 013079 357 LDME 360 (450)
Q Consensus 357 ~~l~ 360 (450)
+++.
T Consensus 386 iel~ 389 (461)
T PRK07482 386 VEFV 389 (461)
T ss_pred EEec
Confidence 9985
No 316
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.65 E-value=5.6e-14 Score=143.07 Aligned_cols=219 Identities=12% Similarity=0.149 Sum_probs=138.6
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhcc-------C-CCEEEEeCCCchhHHHHHH------
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLT------ 159 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~------ 159 (450)
..++...++.++|+++.. .+.++|++| |+||+..|++.... + ..+||+....||+......
T Consensus 86 ~~~~~~~~la~~l~~~~p~~~~~v~f~~s---GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~ 162 (442)
T PRK13360 86 MGHPKAFELANRIAEIAPGGLNHVFFTNS---GSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIV 162 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCCh
Confidence 346778889999999874 467899999 99999999985421 2 2579999999988532210
Q ss_pred ---H-hCCCccCeeEEEeCCC------------------CHHHHHHhhh---cCCceEEEEecCCCCcccccC----HHH
Q 013079 160 ---H-FFPRACNITTTFVDIS------------------DHEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPE 210 (450)
Q Consensus 160 ---~-~~~~~~g~~v~~v~~~------------------d~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~~ 210 (450)
. +.+. ...+.+++.. .++++++++. .+++.+|++|.+....|.+.| +++
T Consensus 163 ~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~ 240 (442)
T PRK13360 163 PNRKAFGAL--LPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQR 240 (442)
T ss_pred hhhhccCCC--CCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHH
Confidence 0 0110 0112223221 1456777773 246789999999999999988 999
Q ss_pred HHHHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh------h
Q 013079 211 LSRLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------Q 277 (450)
Q Consensus 211 I~~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------~ 277 (450)
|.++|+++|+++|+||+++++.. ......+|+++ ++|.+++...++ |.++.++++.+.+.... .
T Consensus 241 lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt--~gK~l~gG~~P~-gav~~~~~i~~~~~~~~~~~~~~~ 317 (442)
T PRK13360 241 LREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLT--CAKGLTNGAIPM-GAVFVSSEIHDAFMQGPEAGIEFF 317 (442)
T ss_pred HHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceee--eeeccccCccce-EEEEEcHHHHHHhhcCCccccccc
Confidence 99999999999999999855531 11223467775 899998644677 66777888877664311 0
Q ss_pred hhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC
Q 013079 278 GALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKL 323 (450)
Q Consensus 278 ~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 323 (450)
+..+..++.+...++...+..++. ....++..++.+++.+.|+++
T Consensus 318 ~~~T~~g~pl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~l~~l 362 (442)
T PRK13360 318 HGYTYSGHPLACAAALATLDLYER-EGLLTRAARLAPYWEDALHSL 362 (442)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHh
Confidence 112233433333333333322221 123344555666777777654
No 317
>PRK07046 aminotransferase; Validated
Probab=99.64 E-value=4.6e-14 Score=143.90 Aligned_cols=170 Identities=18% Similarity=0.125 Sum_probs=125.8
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHH-Hh-------CCCcc
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLT-HF-------FPRAC 166 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~-~~-------~~~~~ 166 (450)
.++...++.+.|+++.+.+.+.|++| |+||+..|++... ...++|+.....||+...... .. .+...
T Consensus 113 ~~~~~~~lAe~l~~~~~~~~v~F~nS---GtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~ 189 (453)
T PRK07046 113 PSEDAAWVGEELARRFGLPYWQVATT---ATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLL 189 (453)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEECC---HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCC
Confidence 45677788888888888889999999 9999999998542 224678888888998642211 10 00001
Q ss_pred Ce------eEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCC---CCCC
Q 013079 167 NI------TTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFS---PLVL 233 (450)
Q Consensus 167 g~------~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~---~~~~ 233 (450)
|+ .+..++.+|++++++.+..+++.+|++|.+....|.+.| +++|.++|+++|+++|+||+++ ++..
T Consensus 190 g~~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg 269 (453)
T PRK07046 190 GQVHDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGG 269 (453)
T ss_pred CCCccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcc
Confidence 21 234455569999999884467899999999888888865 8999999999999999999985 2221
Q ss_pred Cc--cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHH
Q 013079 234 SP--ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMM 273 (450)
Q Consensus 234 ~~--~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~ 273 (450)
.. ..+.+|+++ ++|.+|+ |.++ |++++++++++.+.
T Consensus 270 ~~~~~gv~PDi~t--~gK~lgg-G~Pi-~av~g~~~i~~~~~ 307 (453)
T PRK07046 270 YTRAHGLEPDFLV--VGKPIAG-GVPC-AVYGFSAELAERAQ 307 (453)
T ss_pred hhHHhCCCcccee--ehhhhcC-CCcc-eeeeehHHHHHHHh
Confidence 11 123478887 8999995 6888 88888988888775
No 318
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.64 E-value=6.7e-14 Score=141.70 Aligned_cols=291 Identities=12% Similarity=0.140 Sum_probs=174.5
Q ss_pred CCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhcc-------CCCEEEEeCCCchhHHHHHHHhCC---
Q 013079 96 HFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCS-------SGGHVVAARTLYGGTHALLTHFFP--- 163 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~-------~gd~Vi~~~~~y~~~~~~~~~~~~--- 163 (450)
..++...++.++|+++.+. +.++|++| |+||+..|++.... ...+||.....||+..........
T Consensus 83 ~~~~~~~~la~~L~~~~p~~~~~v~f~~S---GsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~ 159 (428)
T PRK07986 83 ITHPPAIELCRKLVAMTPQPLECVFLADS---GSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDN 159 (428)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCch
Confidence 4577888899999998753 67899999 99999999985431 235799999999874322111000
Q ss_pred ---CccC---eeEEEeCC-----------CCHHHHHHhhhc--CCceEEEEecC-CCCccccc----CHHHHHHHHHhcC
Q 013079 164 ---RACN---ITTTFVDI-----------SDHEMVNSAIVQ--GRTKVLYFESI-SNPTLAVA----NIPELSRLAHDKG 219 (450)
Q Consensus 164 ---~~~g---~~v~~v~~-----------~d~~~l~~ai~~--~~t~lv~i~~~-~NptG~v~----~l~~I~~la~~~g 219 (450)
..++ ..+.+++. .|++++++.+.. +++.+|++|++ +...|.+. .+++|.++|+++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g 239 (428)
T PRK07986 160 SMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREG 239 (428)
T ss_pred hhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 0000 01122221 256677777732 46788999985 66666543 2899999999999
Q ss_pred CEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCc-cceEEEEEcCHHHHHHHHHHh----hhhhhccCCCc
Q 013079 220 VTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDLH----QGALMLLGPTM 287 (450)
Q Consensus 220 i~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~~----~~~~~~~g~~~ 287 (450)
+++|+||+++++.. ......+|+++ ++|.+++ | .++ |.+++++++.+.+.... ....+..|+.+
T Consensus 240 ~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~g-G~~p~-~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~ 315 (428)
T PRK07986 240 ILLIADEIATGFGRTGKLFACEHAGIAPDILC--LGKALTG-GTMTL-SATLTTREVAETISNGEAGCFMHGPTFMGNPL 315 (428)
T ss_pred CEEEEeccccCCccCCCeeeecccCCCCCEEE--echhhhC-CcccC-cchhchHHHHHHhhcCCCCccccCCCCCcCHH
Confidence 99999999855531 11223468886 8999984 5 466 77788888888775421 01122334433
Q ss_pred hHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHH
Q 013079 288 NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANR 367 (450)
Q Consensus 288 ~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~ 367 (450)
...++...++.++.. ...++..++.+++.+.|+++.. +|.+. +.+|.|.++.+++.....+..
T Consensus 316 ~~aaa~a~L~~i~~~-~~~~~~~~~g~~l~~~l~~l~~---~~~i~-------------~vRg~Gl~~~ve~~~~~~~~~ 378 (428)
T PRK07986 316 ACAVANASLSLLESG-DWQQQVAAIEAQLREELAPLRD---APMVA-------------DVRVLGAIGVVETTRPVNMAA 378 (428)
T ss_pred HHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHhc---CCCEE-------------eEeccceEEEEEeCCcccHHH
Confidence 333333333222211 2345556666777777765421 12111 234788899999974433556
Q ss_pred HHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 368 LMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 368 ~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
+...+.. .|+ .+.. . .+.|||+.. +.-+++.++.+.++|.+.-
T Consensus 379 ~~~~l~~---~Gl-~~~~-------------------------~---g~~i~~~Pp-l~it~~ei~~~~~~l~~~l 421 (428)
T PRK07986 379 LQRFFVE---QGV-WIRP-------------------------F---GKLIYLMPP-YIILPEQLQRLTAAVNRAV 421 (428)
T ss_pred HHHHHHH---CCc-EEEe-------------------------c---CCEEEEeCC-CCCCHHHHHHHHHHHHHHH
Confidence 6666654 232 1110 0 146888777 6555666666666665543
No 319
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.63 E-value=3.1e-15 Score=148.07 Aligned_cols=213 Identities=15% Similarity=0.223 Sum_probs=141.2
Q ss_pred CChhHHHHHHHHHHHhCCCeEEE-ecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYC-TASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~-tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
....+.++++..|+++|++..+| |+| .|.+|.+++.+++++||.|++.+.+|.++...+. +.|..++|+++
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnG---sT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~ali-----l~ga~Pvyi~p 135 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNG---STSGNQAMIMALCRPGDKVLVDRNCHKSVYNALI-----LSGAIPVYIPP 135 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSH---HHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHH-----HHTEEEEEEEE
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecC---chHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHH-----HcCCeEEEecC
Confidence 44578999999999999998755 566 7888999999999999999999999999998875 46888888765
Q ss_pred C----------CH-----HHHHHhhhc-CCce---EEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCc
Q 013079 176 S----------DH-----EMVNSAIVQ-GRTK---VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSP 235 (450)
Q Consensus 176 ~----------d~-----~~l~~ai~~-~~t~---lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~ 235 (450)
. ++ +.++++++. ++.+ +|+|.+|+. -|.+.|+++|+++|++++++|+|||++ +++.+.+
T Consensus 136 ~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~ 214 (417)
T PF01276_consen 136 EDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHP 214 (417)
T ss_dssp EE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSG
T ss_pred CccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCC
Confidence 2 34 889888842 3444 489888865 699999999999999999999999998 5555542
Q ss_pred -----cCCCCe-------EEEeCCCCccccCccceEEEEEc-CHH--HHHHHHHHhhhhhhccCCCchHHHHHHHHc-cC
Q 013079 236 -----ARLGAD-------VVVHSISKFISGGADIIAGAVCG-PAN--LVNSMMDLHQGALMLLGPTMNPKVAFELSE-RI 299 (450)
Q Consensus 236 -----~~~g~d-------i~~~S~sK~~g~~g~~igG~l~~-~~~--~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~-~~ 299 (450)
..+|+| +++.|.||.++.- .-++++-. ... -.+++..... ....+.+.....+.....+ .+
T Consensus 215 lp~~a~~~gad~~~~~~~~vvqS~HKtL~al--tQts~lh~~~~~~v~~~~~~~~l~-~~~TTSPSY~lmASlD~a~~~m 291 (417)
T PF01276_consen 215 LPRSALALGADRPNDPGIIVVQSTHKTLPAL--TQTSMLHVKGDRIVDHERVNEALS-MHQTTSPSYPLMASLDVARAQM 291 (417)
T ss_dssp GGTTCSSTTSS-CTSBEEEEEEEHHHHSSS---TT-EEEEEETCCCTTHHHHHHHHH-HHS-SS--HHHHHHHHHHHHHH
T ss_pred CccchhhccCccccccceeeeechhhccccc--ccceEEEecCCCcccHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHH
Confidence 345899 9999999999743 34466633 322 2344443222 1112223222222222211 12
Q ss_pred --CcHHHHHHHHHHHHHHHHHHHH
Q 013079 300 --PHLGLRMKEHCHRALIFARRMK 321 (450)
Q Consensus 300 --~~l~~~~~~~~~~~~~l~~~L~ 321 (450)
..-....++..++++.+++.|+
T Consensus 292 ~~~~G~~l~~~~i~~a~~~R~~i~ 315 (417)
T PF01276_consen 292 EEEEGRELLEEAIELAEEFRKKIN 315 (417)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 1122344555666777777774
No 320
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.63 E-value=2e-13 Score=140.80 Aligned_cols=204 Identities=15% Similarity=0.125 Sum_probs=133.9
Q ss_pred EEEecChHHHHHHHHHHHHHhcc--------------------------CCCEEEEeCCCchhHHHHHHHhCCCccCe--
Q 013079 117 AYCTASDKAGMSAISSVLMQLCS--------------------------SGGHVVAARTLYGGTHALLTHFFPRACNI-- 168 (450)
Q Consensus 117 ~~~tsg~~~gt~ai~~al~~l~~--------------------------~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~-- 168 (450)
.+||+| ||+||..++..... ++..|+++..+|.++...+.. .|+
T Consensus 162 G~~tsG---GS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~-----lglg~ 233 (522)
T TIGR03799 162 GAFCSG---GTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADV-----LGIGR 233 (522)
T ss_pred eEEcCc---hHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHH-----cCCCc
Confidence 589999 99999998865311 124688999999999877642 343
Q ss_pred -eEEEeCCC-----CHHHHHHhhhc---CCceEEEEe--cCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCC-CCc-
Q 013079 169 -TTTFVDIS-----DHEMVNSAIVQ---GRTKVLYFE--SISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLV-LSP- 235 (450)
Q Consensus 169 -~v~~v~~~-----d~~~l~~ai~~---~~t~lv~i~--~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~-~~~- 235 (450)
+++.++.+ |+++|+++|.. .+++.++|. ..++.||.+.|+++|+++|+++|+++|||++|+... ..+
T Consensus 234 ~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~ 313 (522)
T TIGR03799 234 DNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNT 313 (522)
T ss_pred ccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHH
Confidence 56666654 89999998831 455555554 556799999999999999999999999999994332 222
Q ss_pred -----cCC-CCeEEEeCCCCccccCccceEEEE-EcCHHHHHHHHHH-----hhhh-----hhccCCCch-HHHHHHHHc
Q 013079 236 -----ARL-GADVVVHSISKFISGGADIIAGAV-CGPANLVNSMMDL-----HQGA-----LMLLGPTMN-PKVAFELSE 297 (450)
Q Consensus 236 -----~~~-g~di~~~S~sK~~g~~g~~igG~l-~~~~~~~~~l~~~-----~~~~-----~~~~g~~~~-~~~a~~~~~ 297 (450)
..+ ++|.++.|.||++.+|-. + |++ +.++.+.+.+... ..+. ....++... ....+..++
T Consensus 314 ~r~~l~gle~aDSit~d~HK~l~~P~g-~-G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~ 391 (522)
T TIGR03799 314 YRHLLKGIERADSVTIDAHKQLYVPMG-A-GMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLH 391 (522)
T ss_pred HHHHhcCchhCCEEEEChhhcCCcCcc-c-EEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHH
Confidence 222 689999999996554432 4 666 4555555444321 0000 011122221 122333333
Q ss_pred --cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCC
Q 013079 298 --RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYP 330 (450)
Q Consensus 298 --~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p 330 (450)
+...+...+++..++++++.+.|++.+. ++..|
T Consensus 392 ~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~ 427 (522)
T TIGR03799 392 IIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE 427 (522)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC
Confidence 2344667777888999999999988754 55543
No 321
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.63 E-value=6.4e-14 Score=149.54 Aligned_cols=150 Identities=20% Similarity=0.244 Sum_probs=116.9
Q ss_pred CCChhHHHHHHHHHHHhCCCeEEEec-ChHHHHHHHHHHHHHhc----c---C-CCEEEEeCCCchhHHHHHHHhCCCcc
Q 013079 96 HFNPTVLNLSRQMAALEGTEAAYCTA-SDKAGMSAISSVLMQLC----S---S-GGHVVAARTLYGGTHALLTHFFPRAC 166 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~~~~~~ts-g~~~gt~ai~~al~~l~----~---~-gd~Vi~~~~~y~~~~~~~~~~~~~~~ 166 (450)
...+.+.++++.++++.|.+.+-+.. + |+.+..++++++. . + .++|+++...|+.....+. ..
T Consensus 540 G~lq~i~elq~~l~eLtGmd~~Sl~p~s---GA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~-----~~ 611 (954)
T PRK12566 540 GYRAMIDELEAWLCAITGFDAICMQPNS---GAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQ-----MA 611 (954)
T ss_pred CHHHHHHHHHHHHHHHHCCCeEeecCCc---hHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHH-----HC
Confidence 33467889999999999999886666 5 7777766666542 1 2 3578888888865544443 26
Q ss_pred CeeEEEeCCC-----CHHHHHHhhhc---CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCC-c
Q 013079 167 NITTTFVDIS-----DHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLS-P 235 (450)
Q Consensus 167 g~~v~~v~~~-----d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~-~ 235 (450)
|++++.++.+ |+++|++.+ + +++++|.+.+|++-.+...++++|+++||++|+++++|.++ +...+. |
T Consensus 612 GieVv~Vp~D~~G~iDle~L~a~I-~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~P 690 (954)
T PRK12566 612 GMRVVIVECDPDGNVDLDDLKAKA-AAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARP 690 (954)
T ss_pred CCEEEEeccCCCCCcCHHHHHHHh-hccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCCh
Confidence 8899988774 899999998 5 67888888888876666678999999999999999999998 344444 6
Q ss_pred cCCCCeEEEeCCCCccccC
Q 013079 236 ARLGADVVVHSISKFISGG 254 (450)
Q Consensus 236 ~~~g~di~~~S~sK~~g~~ 254 (450)
.++|+|++.+++||++++|
T Consensus 691 g~~GADi~~~s~HKtf~~P 709 (954)
T PRK12566 691 ADIGADVSHMNLHKTFCIP 709 (954)
T ss_pred hhcCCCEEEecCCcccCcC
Confidence 7889999999999998743
No 322
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.63 E-value=7.5e-14 Score=142.42 Aligned_cols=240 Identities=12% Similarity=0.088 Sum_probs=145.5
Q ss_pred CCChhHHHHHHHHHHHhCC----CeE-EEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCCC---c
Q 013079 96 HFNPTVLNLSRQMAALEGT----EAA-YCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPR---A 165 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~----~~~-~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~---~ 165 (450)
..++...++.++|+++... ... ++++| |+||+..|++... ....+|++....||+........... .
T Consensus 79 ~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~s---GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~ 155 (442)
T TIGR00709 79 LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPS---GADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAK 155 (442)
T ss_pred cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCC---HHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhh
Confidence 4577888899999998753 244 45689 9999999998542 22357999898998875443221100 0
Q ss_pred cC-----eeEEEeCCCC-------------H----HHHHHhhh-----cCCceEEEEecCCCCccccc-C---HHHHHHH
Q 013079 166 CN-----ITTTFVDISD-------------H----EMVNSAIV-----QGRTKVLYFESISNPTLAVA-N---IPELSRL 214 (450)
Q Consensus 166 ~g-----~~v~~v~~~d-------------~----~~l~~ai~-----~~~t~lv~i~~~~NptG~v~-~---l~~I~~l 214 (450)
.+ ..+.+++..+ . +.+++.+. .+++.+|+++++++..|.+. | +++|.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~l 235 (442)
T TIGR00709 156 NAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREV 235 (442)
T ss_pred ccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 00 1122333221 1 12333331 14688999999988888774 3 8899999
Q ss_pred HHhcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCc
Q 013079 215 AHDKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTM 287 (450)
Q Consensus 215 a~~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~ 287 (450)
|++||+++|.||+|+++... -.....|+++ ++|.+++ |+++ |+++.+++ ++.+.... +..+..|+.+
T Consensus 236 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~-G~Pi-gav~~~~~-~~~~~~~~-~~~T~~gnpl 309 (442)
T TIGR00709 236 TRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG-GLPL-AVLLIAPE-FDAWQPAG-HTGTFRGNQL 309 (442)
T ss_pred HHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC-Cccc-EEEEEchH-HhccCCCc-CCCCCCcCHH
Confidence 99999999999999666421 1123478888 8999997 7998 77777766 44432111 1223444444
Q ss_pred hHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 288 NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 288 ~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
.+.++...+..++. ....++..++.++|.+.|+++..+ +|... +.+|.|.++.+++.
T Consensus 310 a~aaa~a~L~~i~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~v~-------------~vrG~Gl~~~ie~~ 366 (442)
T TIGR00709 310 AMVTGTEALNYWKD-DNLAQNAQERGERITSFLDDMIKE--HPCIG-------------NVRGRGLMQGIMIV 366 (442)
T ss_pred HHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHh--CCCee-------------eeeccceEEEEEEc
Confidence 44444444332211 122344566667777777653211 11100 33478999999985
No 323
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.63 E-value=9e-14 Score=141.34 Aligned_cols=219 Identities=15% Similarity=0.182 Sum_probs=144.3
Q ss_pred CCChhHHHHHHHHHHHhC-CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhC---------C
Q 013079 96 HFNPTVLNLSRQMAALEG-TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF---------P 163 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g-~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~---------~ 163 (450)
..++...++.++|+++.. .+.++|++| |+||+..|++... ....+|+.....||+......... +
T Consensus 90 ~~~~~~~~la~~l~~~~p~~~~v~f~~s---GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 166 (428)
T PRK12389 90 TPTELEIEFAKMLKEAIPSLEKVRFVNS---GTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTP 166 (428)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEeCC---HHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCC
Confidence 356777888888888764 467899999 9999999998542 223578888888988543321110 0
Q ss_pred CccC------eeEEEeCCCCHHHHHHhhhc--CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCC
Q 013079 164 RACN------ITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPL 231 (450)
Q Consensus 164 ~~~g------~~v~~v~~~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~ 231 (450)
...+ ..+..++..|++.+++.+.. +++.+|++|.+.+..|.+.| +++|.++|+++|+++|+||+++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~ 246 (428)
T PRK12389 167 DSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF 246 (428)
T ss_pred CCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 0011 13344556689999888832 46789999999999999887 999999999999999999999655
Q ss_pred CCC------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh--hhhhhccCCCchHHHHHHHHccCCcHH
Q 013079 232 VLS------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH--QGALMLLGPTMNPKVAFELSERIPHLG 303 (450)
Q Consensus 232 ~~~------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~--~~~~~~~g~~~~~~~a~~~~~~~~~l~ 303 (450)
... .....+|+++ ++|.+++ |.++ |.+++++++++.+.... ....+..|+.+...++.+.+..++..
T Consensus 247 Rt~~~~a~~~~gv~PDivt--~gK~lgg-G~Pi-~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~- 321 (428)
T PRK12389 247 RFMYGGAQDLLGVEPDLTA--LGKIIGG-GLPI-GAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE- 321 (428)
T ss_pred ccCcchhhHHhCCCCCeee--echhhcC-CCce-eEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc-
Confidence 221 1123478765 8999985 6888 66688888887764211 11122344444444443433333221
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 013079 304 LRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 304 ~~~~~~~~~~~~l~~~L~~ 322 (450)
...++..++.++|.+.|++
T Consensus 322 ~l~~~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 322 GVYEKLDRLGAMLEEGILE 340 (428)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 2344455566666666654
No 324
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.63 E-value=1.7e-13 Score=139.94 Aligned_cols=239 Identities=16% Similarity=0.178 Sum_probs=151.5
Q ss_pred CCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhc-------cC-CCEEEEeCCCchhHHHHHHH-----
Q 013079 96 HFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLC-------SS-GGHVVAARTLYGGTHALLTH----- 160 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~-------~~-gd~Vi~~~~~y~~~~~~~~~----- 160 (450)
..++...++.++|+++.+. +.++|++| |+||+..|++... .+ ..+||.....||+.......
T Consensus 94 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~s---GseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~ 170 (453)
T PRK06943 94 CTHEPAIELAERLAALTGGTLGHAFFASD---GASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVA 170 (453)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCC---CHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCCh
Confidence 4567778899999998764 47899999 9999999998652 12 35799999999885422110
Q ss_pred -----hCCCccCeeEEEeCCC-----------------CHHHHHHhhh--cCCceEEEEec-CCCCcccccC----HHHH
Q 013079 161 -----FFPRACNITTTFVDIS-----------------DHEMVNSAIV--QGRTKVLYFES-ISNPTLAVAN----IPEL 211 (450)
Q Consensus 161 -----~~~~~~g~~v~~v~~~-----------------d~~~l~~ai~--~~~t~lv~i~~-~~NptG~v~~----l~~I 211 (450)
+.+. . ..+.+++.. +++++++.+. .+++.+|++|. ++...|.+.+ +++|
T Consensus 171 ~~~~~~~~~-~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~l 248 (453)
T PRK06943 171 LFKDAYDPL-I-RHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGL 248 (453)
T ss_pred hhhcccccC-C-CCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHH
Confidence 0010 0 012222211 2466777763 25788999999 4888887754 8899
Q ss_pred HHHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCc-cceEEEEEcCHHHHHHHHHHh-----hh
Q 013079 212 SRLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDLH-----QG 278 (450)
Q Consensus 212 ~~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~~-----~~ 278 (450)
.++|++||+++|.||+++++.. ....+.+|+++ ++|.+++ | .++ |.++.++++.+.+.... .+
T Consensus 249 r~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt--~gKgl~g-G~~Pi-~av~~~~ei~~~~~~~~~~~~~~~ 324 (453)
T PRK06943 249 RALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC--LSKGISG-GYLPL-SLVLSRDAIFAAFYDDDVTRGFLH 324 (453)
T ss_pred HHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe--eehhhcc-Ccccc-eEEEEcHHHHHhhcccCccCCccC
Confidence 9999999999999999966632 12233578888 8999995 5 478 77788888887664211 01
Q ss_pred hhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013079 279 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 358 (450)
Q Consensus 279 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 358 (450)
..+..|+.+...++...+..++. +...++..+..++|.+.|+++. + +|.+. +.+|.|.++.++
T Consensus 325 ~~T~~gnpl~~aaa~a~L~~i~~-~~l~~~~~~~G~~l~~~L~~l~-~--~~~v~-------------~vrG~Gl~~gve 387 (453)
T PRK06943 325 SHSYTGNPLACRAALATLDLFAE-DDVLARNARKSARLRAALAPLA-A--HPQVR-------------HLRQRGTIFAFD 387 (453)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHh-c--CCCEE-------------eEeccccEEEEE
Confidence 22234444444444333332221 1123444555667777776542 1 22211 234789999999
Q ss_pred eC
Q 013079 359 ME 360 (450)
Q Consensus 359 l~ 360 (450)
+.
T Consensus 388 l~ 389 (453)
T PRK06943 388 VA 389 (453)
T ss_pred Ec
Confidence 86
No 325
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.62 E-value=2.9e-13 Score=138.25 Aligned_cols=290 Identities=13% Similarity=0.187 Sum_probs=170.5
Q ss_pred ChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhC---C-CccCe-
Q 013079 98 NPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFF---P-RACNI- 168 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~---~-~~~g~- 168 (450)
++...+|.++|+++.+. +.++|++| |+||+..|++... ....+||.....||+......... . ...++
T Consensus 95 ~~~~~~lae~L~~~~p~~~~~v~f~~S---GsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 171 (457)
T PRK05639 95 SERAIRVAEKLAEISPIENPKVLFGLS---GSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFS 171 (457)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCc---hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCC
Confidence 56777899999998753 57899999 9999999998542 233578888888988543321110 0 00111
Q ss_pred ----eEEEeCCC-------------CH--------HHHHHhhh-----cCCceEEEEecCCCCcccccC----HHHHHHH
Q 013079 169 ----TTTFVDIS-------------DH--------EMVNSAIV-----QGRTKVLYFESISNPTLAVAN----IPELSRL 214 (450)
Q Consensus 169 ----~v~~v~~~-------------d~--------~~l~~ai~-----~~~t~lv~i~~~~NptG~v~~----l~~I~~l 214 (450)
.+.+++.. |. +.+++.+. .+++.+|++|.++...|.+.| +++|.++
T Consensus 172 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~l 251 (457)
T PRK05639 172 PLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKL 251 (457)
T ss_pred CCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 23333332 12 23444331 357899999999988888754 8899999
Q ss_pred HHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCc
Q 013079 215 AHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTM 287 (450)
Q Consensus 215 a~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~ 287 (450)
|++||+++|+||+++++.. ....+.+|+++ ++|.+++ |.++ |++++++++++ ... .....+..++.+
T Consensus 252 c~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g-G~pi-~av~~~~~i~~-~~~-~~~~~T~~g~p~ 325 (457)
T PRK05639 252 LDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVAS-GMGL-SGVIGRKELMD-LTS-GSALLTPAANPV 325 (457)
T ss_pred HHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcC-CCcc-eeEEehHHHHh-hcC-CCcccCCCcCHH
Confidence 9999999999999865532 11233578888 8999995 5777 88888888877 221 111112233333
Q ss_pred hHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC------
Q 013079 288 NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET------ 361 (450)
Q Consensus 288 ~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~------ 361 (450)
...++...+..++. +...++..++.++|.+.|+++..+...+. +.+|.|.++.+++..
T Consensus 326 ~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~~---------------~VrG~Gl~~gve~~~~~~~~~ 389 (457)
T PRK05639 326 ISAAAEATLEIIEE-ENLLKNALKVGEFIKKRLLEMKESFEVIG---------------DVRGKGLMIGVEIVKENGKPD 389 (457)
T ss_pred HHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHHHHHHHhCCCEE---------------eeccceeEEEEEEecCCCCCC
Confidence 32222222222211 12234445556667777765311100111 234789999999842
Q ss_pred HHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC----CCHHHHHHHHHH
Q 013079 362 EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL----GTLDQRWSQFEK 437 (450)
Q Consensus 362 ~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~----~~~~~~i~~l~~ 437 (450)
.+.+..+...+.. .|++. .. .+...+.|||+.. . +++++.++.|.+
T Consensus 390 ~~~~~~~~~~~~~---~Gv~~-~~-------------------------~g~~~~~lr~~Pp-l~it~~~id~~~~~l~~ 439 (457)
T PRK05639 390 PELTGKICWRAFE---LGLIL-PS-------------------------YGMFGNVIRITPP-LVITKEIAEKGLEIMER 439 (457)
T ss_pred HHHHHHHHHHHHh---CCeEE-ee-------------------------cCCCCCEEEEeCC-CccCHHHHHHHHHHHHH
Confidence 2234456655553 23221 11 0111367999888 5 445555566666
Q ss_pred HHHHh
Q 013079 438 ALSRM 442 (450)
Q Consensus 438 al~~~ 442 (450)
++..+
T Consensus 440 ~l~~~ 444 (457)
T PRK05639 440 AIKDA 444 (457)
T ss_pred HHHHH
Confidence 66554
No 326
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.62 E-value=4.6e-14 Score=139.20 Aligned_cols=243 Identities=19% Similarity=0.227 Sum_probs=148.6
Q ss_pred HHHHHHHHhCCC----eE-EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCC-C----ccCeeEEEe
Q 013079 104 LSRQMAALEGTE----AA-YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFP-R----ACNITTTFV 173 (450)
Q Consensus 104 l~~~iA~l~g~~----~~-~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~-~----~~g~~v~~v 173 (450)
+.+++.++++++ .+ +=.-| |+.|+.+++.+|++|||+|+..+..+++....-..... + ...+++..+
T Consensus 71 a~~ra~~lF~~~~~~w~anvqp~S---Gs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y 147 (399)
T PF00464_consen 71 AIERAKELFGAEPKEWYANVQPHS---GSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPY 147 (399)
T ss_dssp HHHHHHHHHT-STTTEEEE---SS---HHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEE
T ss_pred HHHHHHHHhCCCcccceEEeecCC---chHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEee
Confidence 556677789998 55 44567 99999999999999999999998887765432110000 0 012334443
Q ss_pred CCC------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC------CCCCCCccCCCCe
Q 013079 174 DIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF------SPLVLSPARLGAD 241 (450)
Q Consensus 174 ~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~------~~~~~~~~~~g~d 241 (450)
+++ |.+++++.+...++++|++-..+.| ...|++++.++|++.|+++++|.++ +++..+|.+. +|
T Consensus 148 ~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-AD 224 (399)
T PF00464_consen 148 PVDPDTGLIDYDELEKLAKEHKPKLIICGASSYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-AD 224 (399)
T ss_dssp EB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SS
T ss_pred eeecCCCeECHHHHHHHHhhcCCCEEEECchhcc--CccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-ce
Confidence 333 8999999886679999998655443 4678999999999999999999997 4455688876 99
Q ss_pred EEEeCCCCccccCccceEEEEEcC--------------HHHHHHHHHHhhhhhhccCCCchHHHHHH--HHccCC-cHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGP--------------ANLVNSMMDLHQGALMLLGPTMNPKVAFE--LSERIP-HLGL 304 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~--------------~~~~~~l~~~~~~~~~~~g~~~~~~~a~~--~~~~~~-~l~~ 304 (450)
++++|.||.+.||- ||+++.+ +++.+++....-.. ...++.+...++.+ +..... ...+
T Consensus 225 vvt~sThKtl~GPr---ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~-~qg~~h~~~iaalAval~ea~~~~fk~ 300 (399)
T PF00464_consen 225 VVTGSTHKTLRGPR---GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPG-LQGGPHMHRIAALAVALKEALSPEFKE 300 (399)
T ss_dssp EEEEESSGGG-SSS----EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTT-T-SS--HHHHHHHHHHHHHHTSHHHHH
T ss_pred EEEeeccccccccC---ceEEEEcCCccccCCcccccHHHHHHHhccccCCC-cccCcchhHHHHHHHHHhcccCHHHHH
Confidence 99999999998775 6888877 67777776543211 12233333333322 222222 3566
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC----CHHHHHHHHHHhhc
Q 013079 305 RMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME----TEEKANRLMNYLQN 374 (450)
Q Consensus 305 ~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~----~~~~~~~~~~~l~~ 374 (450)
..++..++++.|++.|.+.|+++..-+.. ..++++++. +...++.++++..+
T Consensus 301 Ya~qVv~NAk~La~~L~~~G~~v~~ggTd------------------~H~vlvd~~~~~~~g~~a~~~Le~~gI 356 (399)
T PF00464_consen 301 YAKQVVKNAKALAEALQERGFKVVTGGTD------------------NHQVLVDLRSFGIDGKEAEKALEEAGI 356 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-EEGGGS-S------------------SSEEEEEGGGGTS-HHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEEECCCC------------------CCeEEEEecccccchHHHHHHHHhcCe
Confidence 77778999999999999999987653322 238888885 23345556665553
No 327
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.62 E-value=7.5e-14 Score=142.66 Aligned_cols=219 Identities=14% Similarity=0.141 Sum_probs=141.8
Q ss_pred CChhHHHHHHHHHHHhC-CCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHh---------CCC
Q 013079 97 FNPTVLNLSRQMAALEG-TEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHF---------FPR 164 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g-~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~---------~~~ 164 (450)
.++...++.++|++... .+.+.|++| |+||+..|++... ...++|+.....||+....+... .+.
T Consensus 137 ~~~~~~~lAe~l~~~~p~~~~v~f~~S---GsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~ 213 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSVEMVRFVNS---GTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPD 213 (474)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCC---hHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCC
Confidence 45566677788887764 578999999 9999999998542 22367888888899865322100 010
Q ss_pred ccCe------eEEEeCCCCHHHHHHhhhc--CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCC
Q 013079 165 ACNI------TTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLV 232 (450)
Q Consensus 165 ~~g~------~v~~v~~~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~ 232 (450)
..|+ .+..++.+|++++++.+.. +++.+|++|.+....|.+.| +++|.++|++||+++|+||+++++.
T Consensus 214 ~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR 293 (474)
T PLN02482 214 SPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFR 293 (474)
T ss_pred CCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCee
Confidence 0121 2334555689999988832 46789999999988898876 6689999999999999999985552
Q ss_pred CC------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh--hhhhccCCCchHHHHHHHHccCCcHHH
Q 013079 233 LS------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFELSERIPHLGL 304 (450)
Q Consensus 233 ~~------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~~~~~~~l~~ 304 (450)
.. .....+|+++ ++|.+| .|.++ |.+++++++++.+..... ...+..++.+...++...+..++. +.
T Consensus 294 ~g~~ga~~~~gv~PDi~t--~gK~lg-gG~Pi-gav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~-~~ 368 (474)
T PLN02482 294 IAYGGAQEYFGITPDLTT--LGKVIG-GGLPV-GAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ-PG 368 (474)
T ss_pred cCcchHhHHhCCCCCEEE--ecchhh-CCCce-EEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc-cC
Confidence 21 1122468765 899999 46888 666888888887742111 111223334443333333333322 22
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 013079 305 RMKEHCHRALIFARRMKKL 323 (450)
Q Consensus 305 ~~~~~~~~~~~l~~~L~~~ 323 (450)
..++..++.++|.+.|++.
T Consensus 369 ~~~~~~~~g~~l~~~L~~l 387 (474)
T PLN02482 369 TYEYLDKITKKLIQGILEA 387 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455566667777777654
No 328
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.62 E-value=2.8e-13 Score=124.92 Aligned_cols=220 Identities=15% Similarity=0.128 Sum_probs=161.3
Q ss_pred hhHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 99 PTVLNLSRQMAALEGTE---AAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~---~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
...+++.+-+-..+... ..++..+ |+.+..+++..++.|||.|++....--+.+. .+..++ .|++|..++.
T Consensus 50 qIm~~v~egikyVFkT~n~~tf~isgs---Gh~g~E~al~N~lePgd~vLv~~~G~wg~ra--~D~~~r-~ga~V~~v~~ 123 (385)
T KOG2862|consen 50 QIMDEVLEGIKYVFKTANAQTFVISGS---GHSGWEAALVNLLEPGDNVLVVSTGTWGQRA--ADCARR-YGAEVDVVEA 123 (385)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEecC---CcchHHHHHHhhcCCCCeEEEEEechHHHHH--HHHHHh-hCceeeEEec
Confidence 34566777777776543 3456666 9999999999999999999887665444332 245555 8999999876
Q ss_pred C-----CHHHHHHhhhcCCceEEEEecCCCCcccccC-HHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCC
Q 013079 176 S-----DHEMVNSAIVQGRTKVLYFESISNPTLAVAN-IPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSI 247 (450)
Q Consensus 176 ~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~-l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~ 247 (450)
+ .++.+.+++...++++|++.+.-..||.++| ++.+.++|++|+++++||.+- +...+...++|+|+.....
T Consensus 124 ~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgS 203 (385)
T KOG2862|consen 124 DIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGS 203 (385)
T ss_pred CcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecc
Confidence 5 7899999997788999999999999999999 778899999999999999985 6666677788999999999
Q ss_pred CCccccCccceEEEEEcCHHHHHHHHHHhhh--------------h-----hhccCCCchHHHH-----HHHHccCCcHH
Q 013079 248 SKFISGGADIIAGAVCGPANLVNSMMDLHQG--------------A-----LMLLGPTMNPKVA-----FELSERIPHLG 303 (450)
Q Consensus 248 sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~--------------~-----~~~~g~~~~~~~a-----~~~~~~~~~l~ 303 (450)
.|.++.|.. + +.++.++...++++..... + .+..-.+++.... ++.+...+-++
T Consensus 204 QKaL~aP~G-L-siisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~ 281 (385)
T KOG2862|consen 204 QKALGAPAG-L-SIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLE 281 (385)
T ss_pred hhhcCCCCC-c-ceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999996643 3 6677777777766543220 0 0111112222211 12222234578
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCe
Q 013079 304 LRMKEHCHRALIFARRMKKLGLK 326 (450)
Q Consensus 304 ~~~~~~~~~~~~l~~~L~~~~~~ 326 (450)
.+.+++++..+++...|+++|.+
T Consensus 282 ~~~~rH~e~s~~l~~~l~~~GLq 304 (385)
T KOG2862|consen 282 NSWRRHREMSKWLKLSLEALGLQ 304 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcc
Confidence 88999999999999999998873
No 329
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=2.2e-13 Score=137.85 Aligned_cols=290 Identities=13% Similarity=0.145 Sum_probs=172.4
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhcc-------CC-CEEEEeCCCchhHHHHHHHhCC--
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHFFP-- 163 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~~~-- 163 (450)
..++...++.++|+++.+ .+.++|++| |+||+..|++.... ++ .+|++....||+..........
T Consensus 80 ~~~~~~~~lae~L~~~~p~~~~~v~f~~S---GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~ 156 (422)
T PRK05630 80 LTHEPAIKLTRKLLNLTDNGLDHVFYSDS---GSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPE 156 (422)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCc
Confidence 456778889999999874 468999999 99999999985421 22 5799999999885432211100
Q ss_pred ----CccC---eeEEEeCCC--------C----HHHHHHhhhcCCceEEEEecC-CCCcccccC----HHHHHHHHHhcC
Q 013079 164 ----RACN---ITTTFVDIS--------D----HEMVNSAIVQGRTKVLYFESI-SNPTLAVAN----IPELSRLAHDKG 219 (450)
Q Consensus 164 ----~~~g---~~v~~v~~~--------d----~~~l~~ai~~~~t~lv~i~~~-~NptG~v~~----l~~I~~la~~~g 219 (450)
...+ ..+.+++.. + .+.+++.+ .+++.+|++|.. +...|.+.+ +++|.++|++||
T Consensus 157 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g 235 (422)
T PRK05630 157 GGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLI-DETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHD 235 (422)
T ss_pred ccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHH-hhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 0000 012222211 1 23455555 568999999995 888787643 889999999999
Q ss_pred CEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh-----hhhhhccCCCc
Q 013079 220 VTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH-----QGALMLLGPTM 287 (450)
Q Consensus 220 i~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~-----~~~~~~~g~~~ 287 (450)
+++|+||+++++... .....+|+++ ++|.+++.-.++ |++++++++.+.+.... .+..+..|+..
T Consensus 236 ~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t--~gK~l~gG~~p~-~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pl 312 (422)
T PRK05630 236 ILLIADEIATGFGRTGELFATLAAGVTPDIMC--VGKALTGGFMSF-AATLCTDKVAQLISTPNGGGALMHGPTFMANPL 312 (422)
T ss_pred CEEEEecceeCCCcCchhhHHHhcCCCCCeee--eechhhcCcccc-ceeeccHHHHHHHhccCCCCccccCCCCcCCHH
Confidence 999999998655321 1223467885 899997421356 88888888887764210 11112333333
Q ss_pred hHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHH
Q 013079 288 NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANR 367 (450)
Q Consensus 288 ~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~ 367 (450)
...++...+..++.. ...++..++.++|.+.|+++. . +|.+. +.+|.|.++.+++.....+..
T Consensus 313 a~aaa~aaL~~l~~~-~~~~~~~~~g~~l~~~L~~l~-~--~~~v~-------------~vRg~Gl~~~ie~~~~~~~~~ 375 (422)
T PRK05630 313 ACAVAHASLEIIETG-MWRKQVKRIEAELIAGLSPLA-H--LPGVA-------------DVRVLGAIGVVEMEQPVDMEE 375 (422)
T ss_pred HHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHhh-c--CCCee-------------eeeccccEEEEEECCcccHHH
Confidence 333333333322211 123345556666766666431 1 22211 234789999999974323445
Q ss_pred HHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 368 LMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 368 ~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
+...+.. .|++. .. . .+.|||... +.-+++.++.+.++|++.
T Consensus 376 ~~~~~~~---~Gl~~-~~-------------------------~---g~~l~~~Pp-L~it~~~i~~~~~~l~~a 417 (422)
T PRK05630 376 ATQAAVD---HGVWL-RP-------------------------F---GRLVYVMPP-YITTSEQIAQICAALAAA 417 (422)
T ss_pred HHHHHHH---CCeEE-Ee-------------------------c---CCEEEEECC-ccCCHHHHHHHHHHHHHH
Confidence 6655553 23211 10 0 146888887 655666666666665543
No 330
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=9.7e-14 Score=140.68 Aligned_cols=256 Identities=11% Similarity=0.123 Sum_probs=156.0
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhcc-------CC-CEEEEeCCCchhHHH-HHHH----
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHA-LLTH---- 160 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~~-------~g-d~Vi~~~~~y~~~~~-~~~~---- 160 (450)
..++...+|.++|+++.. .+.++|++| |+||+..|++.... +| .+|+.....||+... .+.-
T Consensus 84 ~~~~~~~~lae~L~~~~p~~~~~v~f~~s---GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~ 160 (429)
T PRK06173 84 FTHEPAVELAQKLLEILPPSLNKIFFADS---GSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPV 160 (429)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCC---chHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCc
Confidence 456778889999999874 467899999 99999999985431 23 578999999988422 1110
Q ss_pred h-CCCccC---eeEEEeCCC-----------CHHHHHHhhh--cCCceEEEEecC-CCCcccccC----HHHHHHHHHhc
Q 013079 161 F-FPRACN---ITTTFVDIS-----------DHEMVNSAIV--QGRTKVLYFESI-SNPTLAVAN----IPELSRLAHDK 218 (450)
Q Consensus 161 ~-~~~~~g---~~v~~v~~~-----------d~~~l~~ai~--~~~t~lv~i~~~-~NptG~v~~----l~~I~~la~~~ 218 (450)
. ....++ ..+.+++.. +++.+++.+. .+++.+|++|.+ +...|.+.+ +++|.++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~ 240 (429)
T PRK06173 161 TGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY 240 (429)
T ss_pred hhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc
Confidence 0 000000 012233321 3566777773 257889999996 888887743 88999999999
Q ss_pred CCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh----hhhhhccCCCc
Q 013079 219 GVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH----QGALMLLGPTM 287 (450)
Q Consensus 219 gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~----~~~~~~~g~~~ 287 (450)
|+++|+||+++++.. .-.....|+++ ++|.+++.-.++ +.++.++++.+.+.... .+..+..++.+
T Consensus 241 g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG~~p~-~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~ 317 (429)
T PRK06173 241 GVLLIFDEIATGFGRTGKLFALEHAGVVPDIMC--IGKALTGGYLTL-SATITTEAIAQTICSGEAKCFMHGPTFMANPL 317 (429)
T ss_pred CCeEEecchhcCCCcCCcchHHHhcCCCCCEEE--eehhhhCCcccc-ceEEecHHHHHHHhcCCCCccccCCCCCcCHH
Confidence 999999999855532 11223478887 899997422356 77778888887764211 11111223333
Q ss_pred hHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHH
Q 013079 288 NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANR 367 (450)
Q Consensus 288 ~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~ 367 (450)
...++...++.++.. ...++..++.++|.+.|++.. . +|.+. +.+|.|.++.+++.....+..
T Consensus 318 ~~aaa~a~l~~i~~~-~~~~~~~~~g~~l~~~L~~~~-~--~~~v~-------------~vRg~Gl~~~iel~~~~~~~~ 380 (429)
T PRK06173 318 ACAIAAESIRLLLES-PWQQNIQRIEAQLKQELAPAA-E--FDSVA-------------EVRVLGAIGVVEMKEPVNMAT 380 (429)
T ss_pred HHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhh-c--CCCee-------------eeeccceEEEEEeCCcccHHH
Confidence 333333332222211 124455666777777777531 1 12111 223678899999985433556
Q ss_pred HHHHhhc
Q 013079 368 LMNYLQN 374 (450)
Q Consensus 368 ~~~~l~~ 374 (450)
+.+.+..
T Consensus 381 i~~~l~e 387 (429)
T PRK06173 381 LQPRFVE 387 (429)
T ss_pred HHHHHHH
Confidence 6666654
No 331
>PRK07036 hypothetical protein; Provisional
Probab=99.61 E-value=1.1e-13 Score=141.77 Aligned_cols=241 Identities=13% Similarity=0.174 Sum_probs=149.3
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhc------c-C-CCEEEEeCCCchhHHHHHHHhCCC-
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLC------S-S-GGHVVAARTLYGGTHALLTHFFPR- 164 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~------~-~-gd~Vi~~~~~y~~~~~~~~~~~~~- 164 (450)
..++...++.++|+++.. .+.++|++| |+||+..|++... . + ..+|+.....||+...........
T Consensus 92 ~~~~~~~~lae~L~~~~p~~~~~v~f~~s---GseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~ 168 (466)
T PRK07036 92 MTNAPAAELAAKLAELAPGDLNHVFLTTG---GSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKA 168 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCC---chHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCC
Confidence 457778889999998874 357899999 9999999998542 1 2 257888888898865332111000
Q ss_pred ----ccC---eeEEEeCCCC-----------------HHHHHHhhh---cCCceEEEEecCCCCcccccC----HHHHHH
Q 013079 165 ----ACN---ITTTFVDISD-----------------HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSR 213 (450)
Q Consensus 165 ----~~g---~~v~~v~~~d-----------------~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~~I~~ 213 (450)
.++ ..+.+++.++ ++.+++.+. .+++.+|++|.++...|.+.| +++|.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~ 248 (466)
T PRK07036 169 ADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMRE 248 (466)
T ss_pred cccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHH
Confidence 000 1122222211 233445442 256889999999988898876 999999
Q ss_pred HHHhcCCEEEEeCCCCCCCC-------C-ccCCCCeEEEeCCCCccccCc-cceEEEEEcCHHHHHHHHHH------hhh
Q 013079 214 LAHDKGVTVVVDNTFSPLVL-------S-PARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDL------HQG 278 (450)
Q Consensus 214 la~~~gi~livD~~~~~~~~-------~-~~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~------~~~ 278 (450)
+|++||+++|+||+++++.. . .....+|+++ ++|.+++ | .++ |.+++++++.+.+... ..+
T Consensus 249 lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~g-G~~Pi-~av~~~~~i~~~~~~~~~~~~~~~~ 324 (466)
T PRK07036 249 ICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTS-GYQPL-GAVIISERLLDVISGPNAKGNVFTH 324 (466)
T ss_pred HHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--Ecccccc-Ccccc-EEEEEcHHHHHHHhcccCcCccccc
Confidence 99999999999999865521 1 1233578887 8999985 5 467 7777888888776531 011
Q ss_pred hhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013079 279 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 358 (450)
Q Consensus 279 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 358 (450)
..+..|+.+...++...+..++. +...++..+..++|.+.|+++. + +|... +.+|.|.++.++
T Consensus 325 ~~T~~gnpl~~aaa~a~Le~i~~-~~l~~~~~~~g~~l~~~L~~l~-~--~~~v~-------------~vrG~Gl~~~ve 387 (466)
T PRK07036 325 GFTYSGHPVACAAALKNIEIMER-EGLCEHVREVGPYFEERLASLR-E--LPLVG-------------DVRGDHLMACVE 387 (466)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhc-c--CCCEE-------------EEEeeceEEEEE
Confidence 11233444443333333322211 1233445566666777776531 1 12100 334789999999
Q ss_pred eC
Q 013079 359 ME 360 (450)
Q Consensus 359 l~ 360 (450)
|.
T Consensus 388 ~~ 389 (466)
T PRK07036 388 CV 389 (466)
T ss_pred Ec
Confidence 85
No 332
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=4.7e-13 Score=137.00 Aligned_cols=172 Identities=15% Similarity=0.198 Sum_probs=117.9
Q ss_pred CCChhHHHHHHHHHHHhCC-------CeEEEecChHHHHHHHHHHHHHhcc-------C-CCEEEEeCCCchhHHHHHHH
Q 013079 96 HFNPTVLNLSRQMAALEGT-------EAAYCTASDKAGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTH 160 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~-------~~~~~tsg~~~gt~ai~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~ 160 (450)
..++...++.++|+++... +.++|++| |+||+..|++.... + ..+||.....||+.......
T Consensus 104 ~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s---GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals 180 (472)
T PRK08742 104 FTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN---GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALA 180 (472)
T ss_pred cCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC---chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhh
Confidence 4467788899999988742 57899999 99999999986421 2 25799999999886533211
Q ss_pred hCC-----CccC---eeEEEeCCC-----------------CHHHHHHhhh--cCCceEEEEec-CCCCcccccC----H
Q 013079 161 FFP-----RACN---ITTTFVDIS-----------------DHEMVNSAIV--QGRTKVLYFES-ISNPTLAVAN----I 208 (450)
Q Consensus 161 ~~~-----~~~g---~~v~~v~~~-----------------d~~~l~~ai~--~~~t~lv~i~~-~~NptG~v~~----l 208 (450)
... ..++ ..+.+++.. +++.+++.+. .+++.+|++|. +++..|.+.+ +
T Consensus 181 ~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl 260 (472)
T PRK08742 181 VGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYL 260 (472)
T ss_pred ccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHH
Confidence 100 0000 012223221 2456666662 25788999998 5777887653 8
Q ss_pred HHHHHHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHH
Q 013079 209 PELSRLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMM 273 (450)
Q Consensus 209 ~~I~~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~ 273 (450)
++|.++|+++|+++|.||+++++.. ......+|+++ ++|.+++.-.++ |.++.++++++.+.
T Consensus 261 ~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~--~gKgl~gG~~Pl-aav~~~~ei~~~~~ 329 (472)
T PRK08742 261 RRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLC--LSKGLTGGFLPL-SAVLATQQLYDAFL 329 (472)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEE--EcccccCCCCCc-ceeeccHHHHHHhh
Confidence 8999999999999999999866632 11233578888 899998532477 77788888877664
No 333
>PRK07483 hypothetical protein; Provisional
Probab=99.59 E-value=4.4e-13 Score=136.55 Aligned_cols=240 Identities=17% Similarity=0.203 Sum_probs=147.4
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhcc-------CC-CEEEEeCCCchhHHHHHHHh----
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHF---- 161 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~---- 161 (450)
..++...++.++|+++.. .+.++|++| |+||+..|++.... +| .+|+.....||+........
T Consensus 70 ~~~~~~~~lae~L~~~~p~~~~~v~f~~s---GsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~ 146 (443)
T PRK07483 70 FTTEPAEALADRLVAAAPAGLEHVYFVSG---GSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNA 146 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEcCC---cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCc
Confidence 346778889999999864 468999999 99999999985421 23 47888888888864322110
Q ss_pred ------CCCccCeeEEEeCCC----C--------------HHHHHHhhh---cCCceEEEEecCCC-CcccccC----HH
Q 013079 162 ------FPRACNITTTFVDIS----D--------------HEMVNSAIV---QGRTKVLYFESISN-PTLAVAN----IP 209 (450)
Q Consensus 162 ------~~~~~g~~v~~v~~~----d--------------~~~l~~ai~---~~~t~lv~i~~~~N-ptG~v~~----l~ 209 (450)
.+...+ +..++.. + ++++++++. .+++.+|++|.++. ..|.+.+ ++
T Consensus 147 ~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~ 224 (443)
T PRK07483 147 WRREPFAPLLIE--AHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFK 224 (443)
T ss_pred ccccccCCCCCC--CEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHH
Confidence 111011 2222211 1 256666552 25688999999886 3566654 89
Q ss_pred HHHHHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCcc-ceEEEEEcCHHHHHHHHHHh---hh
Q 013079 210 ELSRLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGAD-IIAGAVCGPANLVNSMMDLH---QG 278 (450)
Q Consensus 210 ~I~~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~-~igG~l~~~~~~~~~l~~~~---~~ 278 (450)
+|.++|++||+++|+||+++++.. .-..+.+|+++ ++|.+++ |. ++ |.++.++++.+.+.... .+
T Consensus 225 ~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~g-G~~Pi-~av~~~~~i~~~~~~~~~~~~h 300 (443)
T PRK07483 225 RIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT--IAKGLGA-GYQPI-GAVLASDRIYDAIADGSGFFQH 300 (443)
T ss_pred HHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeee--ehhhhcc-Ccccc-EEEEEcHHHHHHHhcCCCcccc
Confidence 999999999999999999866632 12233578888 8999985 54 77 77788888877764311 11
Q ss_pred hhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEE
Q 013079 279 ALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLD 358 (450)
Q Consensus 279 ~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~ 358 (450)
..+..|+.+...++...+..++. +...++..+..++|.+.|++.-.+ +|... +.+|.|.++.++
T Consensus 301 ~~T~~gnpl~~aaa~a~l~~i~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~i~-------------~vRG~Glm~gie 364 (443)
T PRK07483 301 GHTYLGHATACAAALAVQRVIAE-DGLLANVRARGEQLRARLRERLGQ--HPHVG-------------DIRGRGLFVGVE 364 (443)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhc--CCCee-------------eEeecccEEEEE
Confidence 22344455444444443332221 112334455556666666542111 11100 234789999999
Q ss_pred eC
Q 013079 359 ME 360 (450)
Q Consensus 359 l~ 360 (450)
+.
T Consensus 365 ~~ 366 (443)
T PRK07483 365 LV 366 (443)
T ss_pred Ee
Confidence 84
No 334
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.59 E-value=2.5e-13 Score=138.20 Aligned_cols=289 Identities=13% Similarity=0.170 Sum_probs=166.4
Q ss_pred CCChhHHHHHHHHHHHh---CCCeEEEecChHHHHHHHHHHHHHhcc--------C------CCEEEEeCCCchhHHHHH
Q 013079 96 HFNPTVLNLSRQMAALE---GTEAAYCTASDKAGMSAISSVLMQLCS--------S------GGHVVAARTLYGGTHALL 158 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~---g~~~~~~tsg~~~gt~ai~~al~~l~~--------~------gd~Vi~~~~~y~~~~~~~ 158 (450)
...+...++.++|+++. +.+.++|++| |+||+..|++.... . +.+|+.....||+.....
T Consensus 82 ~~~~~~~~l~~~l~~~~~~~~~~~v~f~~s---GsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~a 158 (431)
T TIGR03251 82 VYTVAMARFVDTFARVLGDPALPHLFFIEG---GALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYT 158 (431)
T ss_pred CCCHHHHHHHHHHHHhcCCCCcCEEEEeCC---cHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhh
Confidence 34667777888888875 2367899999 99999999985421 1 367999999998865332
Q ss_pred HHhCC---CccC---------eeEEEe--CC-------------CCHHHHHHhhh--cCCceEEEEecCCCCccccc---
Q 013079 159 THFFP---RACN---------ITTTFV--DI-------------SDHEMVNSAIV--QGRTKVLYFESISNPTLAVA--- 206 (450)
Q Consensus 159 ~~~~~---~~~g---------~~v~~v--~~-------------~d~~~l~~ai~--~~~t~lv~i~~~~NptG~v~--- 206 (450)
..... ...+ +...+. +. .+++++++.+. .+++.+|++|.++...|.+.
T Consensus 159 ls~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~ 238 (431)
T TIGR03251 159 LSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRP 238 (431)
T ss_pred hhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCH
Confidence 11100 0000 000000 00 12344555552 35789999999999889875
Q ss_pred -CHHHHHHHHHhcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCH--HHHHHHHHHh
Q 013079 207 -NIPELSRLAHDKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPA--NLVNSMMDLH 276 (450)
Q Consensus 207 -~l~~I~~la~~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~--~~~~~l~~~~ 276 (450)
.+++|.++|++||+++|+||+++++... ...+.+|+++ ++|.+ + ++|++.+++ ++........
T Consensus 239 ~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~--~---~~g~~~~~~i~~~~~~~~~~~ 311 (431)
T TIGR03251 239 EFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKT--Q---VCGIMAGRRVDEVADNVFAVP 311 (431)
T ss_pred HHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccC--c---cceEEecchHHHhhhhcccCc
Confidence 3899999999999999999999666432 2234578887 78876 2 346666543 2221111100
Q ss_pred -hhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEE
Q 013079 277 -QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLL 355 (450)
Q Consensus 277 -~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~ 355 (450)
....+..|+.+...++...+..++.. ...++..++.+++.+.|+++..+ +|.+.. +.+|.|.++
T Consensus 312 ~~~~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~--~~~~i~------------~vrg~G~~~ 376 (431)
T TIGR03251 312 SRLNSTWGGNLVDMVRATRILEIIEEE-RLVDNARVQGAHLLARLHELAAE--FPHLVS------------NPRGRGLMC 376 (431)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHh--Ccccee------------cccccceeE
Confidence 11122334433333333333222110 12233344445555555442110 111000 123678899
Q ss_pred EEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHH
Q 013079 356 CLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQF 435 (450)
Q Consensus 356 ~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l 435 (450)
.++++..+....+...+.. .|++. ... ....|||++. ...+++.++.+
T Consensus 377 ~i~~~~~~~~~~~~~~l~~---~Gvl~-~~~---------------------------g~~~lr~~P~-l~~t~~eid~~ 424 (431)
T TIGR03251 377 AFDLPSTADRDEVIRQLYR---EGVLL-LGC---------------------------GERSIRFRPP-LTVTREEIDAA 424 (431)
T ss_pred EEEeCCHHHHHHHHHHHHh---CCeEE-ecC---------------------------CCCeEEEECC-ccCCHHHHHHH
Confidence 9999865555667777664 23221 100 0256999999 88888888888
Q ss_pred HHHHHH
Q 013079 436 EKALSR 441 (450)
Q Consensus 436 ~~al~~ 441 (450)
.++|++
T Consensus 425 l~~l~~ 430 (431)
T TIGR03251 425 IDAIRR 430 (431)
T ss_pred HHHHHh
Confidence 888765
No 335
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.59 E-value=1.7e-13 Score=140.31 Aligned_cols=241 Identities=11% Similarity=0.116 Sum_probs=149.9
Q ss_pred CChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhcc-------CC-CEEEEeCCCchhHHHHHHHhCCC--
Q 013079 97 FNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHFFPR-- 164 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~~~~-- 164 (450)
.++...++.++|+++... +.++|++| |+||+..|++.... +| .+||.....||+...........
T Consensus 97 ~~~~~~~lae~L~~~~p~~~~~v~f~~S---GseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~ 173 (460)
T PRK06916 97 ANVPSILLAEKLIEVVPEGLKKVFYSDS---GATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDL 173 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcc
Confidence 467778899999998753 57899999 99999999985431 33 57899999998854332111000
Q ss_pred ---ccC---eeEEEeCCC-----------------CHHHHHHhhh--cCCceEEEEec-CCCCcccccC----HHHHHHH
Q 013079 165 ---ACN---ITTTFVDIS-----------------DHEMVNSAIV--QGRTKVLYFES-ISNPTLAVAN----IPELSRL 214 (450)
Q Consensus 165 ---~~g---~~v~~v~~~-----------------d~~~l~~ai~--~~~t~lv~i~~-~~NptG~v~~----l~~I~~l 214 (450)
.++ ..+..++.. +++++++.+. .+++.+|++|. ++...|.+.+ +++|.++
T Consensus 174 ~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~l 253 (460)
T PRK06916 174 FHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNL 253 (460)
T ss_pred cccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHH
Confidence 000 011222111 3456666662 25789999999 6888887753 8899999
Q ss_pred HHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh------hhhhh
Q 013079 215 AHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH------QGALM 281 (450)
Q Consensus 215 a~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~------~~~~~ 281 (450)
|+++|+++|+||+++++.. ....+.+|+++ ++|.+++.-.++ |++++++++.+.+.... .+..+
T Consensus 254 c~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~gG~~Pi-~av~~~~ei~~~~~~~~~~~~~~~~~~T 330 (460)
T PRK06916 254 CTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLTGGYLPI-AITVTTDEIYNAFYGDYEEQKTFFHGHS 330 (460)
T ss_pred HHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhhcCcccc-ceeeecHHHHHHhhccccccCccccCCC
Confidence 9999999999999865531 12233578887 899998532478 88888888877664210 01122
Q ss_pred ccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 282 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 282 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
..|+.+...++...+..++. ....++..++.+++.+.|+++. + +|.+. +.+|.|.++.+++.
T Consensus 331 ~~gnpl~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~l~~l~-~--~~~v~-------------~vrG~Glm~giel~ 392 (460)
T PRK06916 331 YTGNPLGCAVALANLELYEK-TNLIEQVARKTEYVATQLEDLF-A--LKHVG-------------DIRQLGLMVGIELV 392 (460)
T ss_pred CCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHhh-c--CCCeE-------------EeecCCceeeEEee
Confidence 33444443333333322211 1233455666667777776642 1 12111 23478999999885
No 336
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=3.6e-13 Score=125.02 Aligned_cols=240 Identities=17% Similarity=0.193 Sum_probs=165.8
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc------c--CCC--EEEEeCCCchhH-H---------HH
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC------S--SGG--HVVAARTLYGGT-H---------AL 157 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~------~--~gd--~Vi~~~~~y~~~-~---------~~ 157 (450)
+...-++++.+++++|.+.++-++. |.||...+++... + |.+ .|+.....|++- . ..
T Consensus 100 nd~~~~f~~~vt~lf~~~kvlpmnT---GaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds 176 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYDKVLPMNT---GAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDS 176 (427)
T ss_pred hhhHHHHHHHHHHhcCcceeeeccc---chhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcch
Confidence 4456789999999999999999999 9999999997542 1 222 344444444431 1 12
Q ss_pred HHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC
Q 013079 158 LTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL 233 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~ 233 (450)
+..+.+- ....+..++..|.++|+.++.+++.+++.+|.++.+.|.+.| ++++.++|++|++++|.||+|+++..
T Consensus 177 ~~~fgp~-~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~R 255 (427)
T KOG1402|consen 177 WDGFGPF-LPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLAR 255 (427)
T ss_pred hhccCCC-CCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccc
Confidence 2344442 222367778889999999997788999999999999999965 89999999999999999999966643
Q ss_pred -------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHH
Q 013079 234 -------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRM 306 (450)
Q Consensus 234 -------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~ 306 (450)
+......|+++ +.|.+++.-.++ ..+.++++++..+..... ..+..|+++....+.+++.-+.+ +...
T Consensus 256 TGk~la~d~env~PDivi--lgKalSGG~~Pv-savl~~~~im~~~~pgeH-gsTyggNpLg~~vaiAalevi~e-ekL~ 330 (427)
T KOG1402|consen 256 TGKLLACDYENVRPDIVI--LGKALSGGVYPV-SAVLADDDIMLNIKPGEH-GSTYGGNPLGCAVAIAALEVIVE-EKLV 330 (427)
T ss_pred cCcEEEeehhhcCCCeEE--EeccccCCeeee-EEEEecHHHHhccCCCcc-ccccCCChHHHHHHHHHHHHHHH-HHHH
Confidence 23344679999 999999877777 556677777766654433 34456666666666554432221 2233
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 307 KEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 307 ~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
++...+...|..+|.+++.++ |+ ++...+|.|.+..+.+.
T Consensus 331 era~~lG~~l~~~L~~l~~~~--p~------------~v~~VRGrGl~~ai~i~ 370 (427)
T KOG1402|consen 331 ERAAKLGEILRDQLNKLQKKF--PH------------VVKEVRGRGLLNAIVIN 370 (427)
T ss_pred HHHHHHHHHHHHHHHhccccc--cc------------hhheeeccceEEEEEec
Confidence 445566677778887765432 22 11234578888888876
No 337
>PRK07480 putative aminotransferase; Validated
Probab=99.58 E-value=5.4e-13 Score=136.29 Aligned_cols=242 Identities=14% Similarity=0.198 Sum_probs=146.7
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhcc-------CC-CEEEEeCCCchhHHHHHHHh----
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLCS-------SG-GHVVAARTLYGGTHALLTHF---- 161 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~~-------~g-d~Vi~~~~~y~~~~~~~~~~---- 161 (450)
..++...++.++|+++.. .+.++|++| |+||+..|++.... +| .+||.....||+........
T Consensus 91 ~~~~~~~~lae~L~~~~p~~~~~v~f~~S---GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~ 167 (456)
T PRK07480 91 TTHPPAIELAAKLAEVAPPGFNHVFFTNS---GSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMK 167 (456)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCCh
Confidence 457888899999999884 367899999 99999999975421 23 46888888888854221000
Q ss_pred -CCCccC---eeEEEeCCC---------------C--HHHHHHhhh---cCCceEEEEecCCCCcccccC----HHHHHH
Q 013079 162 -FPRACN---ITTTFVDIS---------------D--HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSR 213 (450)
Q Consensus 162 -~~~~~g---~~v~~v~~~---------------d--~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~~I~~ 213 (450)
.....+ ..+..++.+ + ++.+++.+. .+++.+|++|.++...|.+.+ +++|.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~ 247 (456)
T PRK07480 168 YMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQR 247 (456)
T ss_pred hhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 000011 012222211 1 255554442 257889999999988888765 999999
Q ss_pred HHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHH-Hh--hhhhhcc
Q 013079 214 LAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD-LH--QGALMLL 283 (450)
Q Consensus 214 la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~-~~--~~~~~~~ 283 (450)
+|++||+++|+||+++++.. .-....+|+++ ++|.+++.-.++ |.+++++++.+.+.. .. .+..+..
T Consensus 248 lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG~~Pi-~av~~~~~i~~~~~~~~~~~~~~~T~~ 324 (456)
T PRK07480 248 ICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTSGYIPM-GAVGVGDRVAEVLIEEGGEFNHGFTYS 324 (456)
T ss_pred HHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhccCCccc-eEEEEcHHHHHHHhcCCCCcccCCCCC
Confidence 99999999999999865531 11223468876 899999532367 777778888776631 11 1122344
Q ss_pred CCCchHHHHHHHHccCCcHHHHHHHH-HHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 284 GPTMNPKVAFELSERIPHLGLRMKEH-CHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 284 g~~~~~~~a~~~~~~~~~l~~~~~~~-~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
|+.+...++...+..++. +...++. .+..++|.+.|++.. + +|... +.+|.|.++.+++.
T Consensus 325 gnpl~~Aaa~a~L~~l~~-~~l~~~~~~~~g~~l~~~l~~l~-~--~~~i~-------------~vrG~Glm~gie~~ 385 (456)
T PRK07480 325 GHPVAAAVALANLRILRD-EGIVERVRDDTGPYLQKRLRELA-D--HPLVG-------------EVRGVGLVGAIELV 385 (456)
T ss_pred cCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHhh-c--CCCee-------------eEEeecceEEEEEe
Confidence 444444444333332221 1122333 244566666665531 1 12110 23478999999984
No 338
>PRK06148 hypothetical protein; Provisional
Probab=99.58 E-value=4.8e-13 Score=148.58 Aligned_cols=257 Identities=16% Similarity=0.154 Sum_probs=156.8
Q ss_pred CCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHh----CCCcc
Q 013079 95 RHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHF----FPRAC 166 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~----~~~~~ 166 (450)
++.++...++.++|+++... +.++|++| |+||+.+|++... ....+||+....||+........ ..+..
T Consensus 659 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~nS---GsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~ 735 (1013)
T PRK06148 659 RYLHDAIVAYAERLTATLPDGLTVAFFVNS---GSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKG 735 (1013)
T ss_pred CcCCHHHHHHHHHHHHhCCCCcCEEEEeCC---cHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccC
Confidence 45677888899999988753 57899999 9999999998542 22357899898888864321110 00000
Q ss_pred C----eeEEEe--------CCC--C-------HHHHHHhhh-----cCCceEEEEecCCCCcccccC----HHHHHHHHH
Q 013079 167 N----ITTTFV--------DIS--D-------HEMVNSAIV-----QGRTKVLYFESISNPTLAVAN----IPELSRLAH 216 (450)
Q Consensus 167 g----~~v~~v--------~~~--d-------~~~l~~ai~-----~~~t~lv~i~~~~NptG~v~~----l~~I~~la~ 216 (450)
+ ..+..+ +.. + .+.+++.+. .+++.+|++|.+....|.+.+ +++|.++|+
T Consensus 736 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~ 815 (1013)
T PRK06148 736 GKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVR 815 (1013)
T ss_pred CCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHH
Confidence 1 011111 111 1 134554442 146889999999988888876 999999999
Q ss_pred hcCCEEEEeCCCCCCCCC--------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCch
Q 013079 217 DKGVTVVVDNTFSPLVLS--------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMN 288 (450)
Q Consensus 217 ~~gi~livD~~~~~~~~~--------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~ 288 (450)
++|+++|.||+++++... -.....|+++ ++|.+|+ |.++ |.+++++++.+.+........++.|+.++
T Consensus 816 ~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lgg-G~Pl-gav~~~~ei~~~~~~g~~~~~Tf~gnpla 891 (1013)
T PRK06148 816 AAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIGN-GHPM-GAVVTTREIADSFDNGMEYFNTFGGNPVS 891 (1013)
T ss_pred HhCCEEEEEecccCCCCCCCcchhhhhcCCCcceee--ecccccC-Ccce-EEEEEcHHHHhhccCCCccccCCCCCHHH
Confidence 999999999999655321 1223478877 8999995 6888 77888888887764321112234445554
Q ss_pred HHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC-------
Q 013079 289 PKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET------- 361 (450)
Q Consensus 289 ~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~------- 361 (450)
..++...+..++. +...++..+..++|.+.|+++..+....+ +.+|.|.++.+++..
T Consensus 892 ~aaa~a~L~~i~~-e~l~~~~~~~G~~l~~~L~~l~~~~~~i~---------------~VrG~Gl~~gvel~~~~~~~~~ 955 (1013)
T PRK06148 892 CAIGLAVLDIIED-EDLQRNALEIGNYLLAGLRELQDRFDIIG---------------DVRGMGLFLGIELVTDRKTKAP 955 (1013)
T ss_pred HHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCce---------------EEeeeceEEEEEecCCccccCc
Confidence 4444443332221 12233445555666666655311110111 234789999999852
Q ss_pred -HHHHHHHHHHhhc
Q 013079 362 -EEKANRLMNYLQN 374 (450)
Q Consensus 362 -~~~~~~~~~~l~~ 374 (450)
.+.+..+++.+..
T Consensus 956 ~~~~~~~i~~~~~~ 969 (1013)
T PRK06148 956 ATAIARYVKNGARE 969 (1013)
T ss_pred cHHHHHHHHHHHHh
Confidence 1224456666654
No 339
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.58 E-value=7e-13 Score=134.62 Aligned_cols=291 Identities=11% Similarity=0.110 Sum_probs=175.9
Q ss_pred CCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhcc-------C-CCEEEEeCCCchhHHHHHHHhCC--
Q 013079 96 HFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTHFFP-- 163 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~~~~-- 163 (450)
..++...++.+.|+++.+. +.++|+++ |++|+..+++.... + ..+||+....|++....+.....
T Consensus 85 ~~~~~~~~la~~l~~~~~~~~~~v~f~~s---GseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~ 161 (427)
T TIGR00508 85 FTHKPAIELCQKLVKMTPNALDCVFLADS---GSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPE 161 (427)
T ss_pred cCCHHHHHHHHHHHhhCCCCCCEEEEeCC---cHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCc
Confidence 3456778888899988753 57899999 99999999985431 2 25799999999886433211100
Q ss_pred ----C-ccC-e-eEEEeC-----------CCCHHHHHHhhhc--CCceEEEEecC-CCCcccc----cCHHHHHHHHHhc
Q 013079 164 ----R-ACN-I-TTTFVD-----------ISDHEMVNSAIVQ--GRTKVLYFESI-SNPTLAV----ANIPELSRLAHDK 218 (450)
Q Consensus 164 ----~-~~g-~-~v~~v~-----------~~d~~~l~~ai~~--~~t~lv~i~~~-~NptG~v----~~l~~I~~la~~~ 218 (450)
. ..+ . .+..++ ..|++++++.+.. +++++|++|++ ++..|.+ .++++|.++|+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~ 241 (427)
T TIGR00508 162 NSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQY 241 (427)
T ss_pred ccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc
Confidence 0 000 0 011111 0145667777632 46789999986 6666654 3589999999999
Q ss_pred CCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCCccccCcc-ceEEEEEcCHHHHHHHHHHhh----hhhhccCCC
Q 013079 219 GVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGAD-IIAGAVCGPANLVNSMMDLHQ----GALMLLGPT 286 (450)
Q Consensus 219 gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~-~igG~l~~~~~~~~~l~~~~~----~~~~~~g~~ 286 (450)
|+++|+||++.++... -..+..|+++ ++|.++ .|. ++ +.++.++++.+.+..... ...+..++.
T Consensus 242 ~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~-gG~~p~-~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p 317 (427)
T TIGR00508 242 DILLIADEIATGFGRTGKLFACEHAGVVPDILC--VGKALT-GGYMTL-SATVTTDKVAQTISSGEAGCFMHGPTFMGNP 317 (427)
T ss_pred CCEEEEeccccCCCcCCccchhhhcCCCCCEEE--echhhh-cCcccc-eEEEEcHHHHHHHhcCCCCccccCCCCCcCH
Confidence 9999999998545321 1223578777 899997 453 55 778888888887753211 111123333
Q ss_pred chHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHH
Q 013079 287 MNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKAN 366 (450)
Q Consensus 287 ~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~ 366 (450)
+...++...+..++.. ...++..++.++|.+.|+++.. +|... +.+|.|.++.+.+.+.....
T Consensus 318 ~~~aaa~a~l~~l~~~-~~~~~~~~~~~~l~~~L~~l~~---~~~i~-------------~vrg~G~~~~i~~~~~~~~~ 380 (427)
T TIGR00508 318 LACAVAEASLAILLEG-EWQKQVSAIENQLKRELSPLRK---NPVVK-------------DVRVLGAIGVVEMYKPVNVE 380 (427)
T ss_pred HHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhhc---CCCEE-------------eEeccccEEEEEECCccCHH
Confidence 3333333333322211 2245566677778888876532 12111 12367889999997443355
Q ss_pred HHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhh
Q 013079 367 RLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQ 443 (450)
Q Consensus 367 ~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~ 443 (450)
.+...+... | +.+.. ....+|++.. ...+++.++.+.+++++.-
T Consensus 381 ~~~~~l~~~---G-v~~~~----------------------------~~~~l~~~pp-l~~t~~~id~~~~~l~~~l 424 (427)
T TIGR00508 381 ELQKKFVEQ---G-VWIRP----------------------------FGKLIYVMPP-YIITTEQLQKLTAALIEAL 424 (427)
T ss_pred HHHHHHHHC---C-eEEEe----------------------------cCCEEEEECC-CCCCHHHHHHHHHHHHHHH
Confidence 666666542 3 22110 0135888888 7666777777777766543
No 340
>PRK06917 hypothetical protein; Provisional
Probab=99.58 E-value=7e-13 Score=135.22 Aligned_cols=305 Identities=13% Similarity=0.150 Sum_probs=175.9
Q ss_pred CCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhc-------cCC-CEEEEeCCCchhHHHHHHHhCCC-
Q 013079 96 HFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLC-------SSG-GHVVAARTLYGGTHALLTHFFPR- 164 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~-------~~g-d~Vi~~~~~y~~~~~~~~~~~~~- 164 (450)
..++...++.++|+++... +.++|++| |+||+..|++... .+| .+|+.....||+...........
T Consensus 71 ~~~~~~~~lae~L~~~~p~~~~~v~f~~s---GsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~ 147 (447)
T PRK06917 71 FTSEPAEKLAKKLSDLSPGDLNWSFFVNS---GSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHP 147 (447)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCC---hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCc
Confidence 4567788899999998753 46899999 9999999998652 123 57888888898865432111000
Q ss_pred ----ccC---eeEEEeCC-----------------CCHHHHHHhhhc---CCceEEEEecCCCCc-ccccC----HHHHH
Q 013079 165 ----ACN---ITTTFVDI-----------------SDHEMVNSAIVQ---GRTKVLYFESISNPT-LAVAN----IPELS 212 (450)
Q Consensus 165 ----~~g---~~v~~v~~-----------------~d~~~l~~ai~~---~~t~lv~i~~~~Npt-G~v~~----l~~I~ 212 (450)
.++ ..+..++. .+++.+++.+.. +++.+|++|.+.... |.+.+ +++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr 227 (447)
T PRK06917 148 LRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIK 227 (447)
T ss_pred cccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHH
Confidence 000 00111110 024566666631 468899999987644 45543 88999
Q ss_pred HHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCcc-ceEEEEEcCHHHHHHHHHHhh---hhhh
Q 013079 213 RLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGAD-IIAGAVCGPANLVNSMMDLHQ---GALM 281 (450)
Q Consensus 213 ~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~-~igG~l~~~~~~~~~l~~~~~---~~~~ 281 (450)
++|+++|+++|+||+++++.. .-.....|+++ ++|.+++ |. ++ |++++++++++.+..... +..+
T Consensus 228 ~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~--~gK~l~~-G~~Pi-~a~~~~~~i~~~~~~~~~~~~~~~T 303 (447)
T PRK06917 228 EICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMT--LGKGLGA-GYTPI-AATVVSDRVMEPILRGSRSIMSGHT 303 (447)
T ss_pred HHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEE--eeehhcc-CCcce-EEEEEcHHHHHHHhccCcccccccC
Confidence 999999999999999865531 11233578876 8999984 53 67 777788888877643211 1112
Q ss_pred ccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013079 282 LLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 361 (450)
Q Consensus 282 ~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 361 (450)
..|+.+...++...+..++. +...++..++.++|.+.|+++..+...+. +.+|.|.++.++|..
T Consensus 304 ~~gnpl~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~---------------~vrG~Gl~~~ie~~~ 367 (447)
T PRK06917 304 LSANPLSAATALAVLEYMEK-HNLPEKAAEKGEYLIKGLQKVQQQSTIIG---------------DVRGKGLLIGVEFVA 367 (447)
T ss_pred CCCCHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHhcCCCEE---------------EEeecceEEEEEEec
Confidence 33444444333333332211 12334555566667677665421110111 234788999999841
Q ss_pred -----------HHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCC---CCC
Q 013079 362 -----------EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGY---LGT 427 (450)
Q Consensus 362 -----------~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~---~~~ 427 (450)
.+....+...+.. .|++....+. .. .|...+.|||+..+ .++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~---~Gvl~~~~~~---------~~------------~g~~~~~i~l~Ppl~it~~e 423 (447)
T PRK06917 368 DKKTKQPFSKSQAVASELISVAAK---NGLLLYPAVA---------GQ------------DGKEGDAVIIAPPMTITYSE 423 (447)
T ss_pred cCCcCCCCcchhHHHHHHHHHHHh---CCcEEEeccc---------cc------------CCCCCCEEEEECCCcCCHHH
Confidence 1224455555543 2322110000 00 01113678888661 255
Q ss_pred HHHHHHHHHHHHHHhhhcCC
Q 013079 428 LDQRWSQFEKALSRMQDSGV 447 (450)
Q Consensus 428 ~~~~i~~l~~al~~~~~~~~ 447 (450)
+++.++.|.++|.++.++++
T Consensus 424 id~~~~~l~~~l~~~~~~~~ 443 (447)
T PRK06917 424 LDELLSIFAKSVEEMMQKGG 443 (447)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 66666777777777655443
No 341
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.57 E-value=4.6e-13 Score=132.53 Aligned_cols=296 Identities=13% Similarity=0.156 Sum_probs=178.8
Q ss_pred ccCCCChhHHHHHHHHHHHhC---CCeEEEecChHHHHHHHHHHHHHhc-------cCC-CEEEEeCCCchhHHHHH-H-
Q 013079 93 YSRHFNPTVLNLSRQMAALEG---TEAAYCTASDKAGMSAISSVLMQLC-------SSG-GHVVAARTLYGGTHALL-T- 159 (450)
Q Consensus 93 y~r~~~~~~~~l~~~iA~l~g---~~~~~~tsg~~~gt~ai~~al~~l~-------~~g-d~Vi~~~~~y~~~~~~~-~- 159 (450)
++-...| ..+|.++|+++.. -+.++|++| |++|+..+++... ++. .++|+-...||+..-.. .
T Consensus 82 ~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~s---GSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv 157 (449)
T COG0161 82 GGFTHEP-AIELAEKLAELAPEGGLDHVFFTDS---GSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSV 157 (449)
T ss_pred cccCCch-HHHHHHHHHHhCCCCCccEEEEeCC---chHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheec
Confidence 4444455 8999999999987 467899999 9999999998543 222 35888888887743221 0
Q ss_pred --------HhCCCccCeeEEEeCCC-----------C------HHHHHHhhhc---CCceEEEEecCCCC-cccccC---
Q 013079 160 --------HFFPRACNITTTFVDIS-----------D------HEMVNSAIVQ---GRTKVLYFESISNP-TLAVAN--- 207 (450)
Q Consensus 160 --------~~~~~~~g~~v~~v~~~-----------d------~~~l~~ai~~---~~t~lv~i~~~~Np-tG~v~~--- 207 (450)
.+... .-..+..++.+ + .++|++.|.. ++..++++|.+..- .|.+.|
T Consensus 158 ~g~~~~~~~~~~~-ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~ 236 (449)
T COG0161 158 GGPVALRHAFYDP-LLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPG 236 (449)
T ss_pred cCchhhhhhhccc-cccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChH
Confidence 11100 00111122211 1 4566666633 56788999998777 666654
Q ss_pred -HHHHHHHHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh--
Q 013079 208 -IPELSRLAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ-- 277 (450)
Q Consensus 208 -l~~I~~la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~-- 277 (450)
++++.++|++|||++|+||+.++|.. .-...-.|+++ ++|.+.+.-.++ |.++.++++.+.+.....
T Consensus 237 Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~GY~Pl-~a~l~~~~I~~~~~~~~~~~ 313 (449)
T COG0161 237 YLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGGYLPL-SAVLTSDRIYEAFSDGDAGA 313 (449)
T ss_pred HHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--ecccccccchhh-HhHhhhHHHHHHHhcccCCe
Confidence 88999999999999999999766642 11223478888 999999877777 777777888888765311
Q ss_pred --hhhhccCCCchHHHHHHHHccCCcHH--HHHHHHHHHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcC
Q 013079 278 --GALMLLGPTMNPKVAFELSERIPHLG--LRMKEHCHRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFG 352 (450)
Q Consensus 278 --~~~~~~g~~~~~~~a~~~~~~~~~l~--~~~~~~~~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g 352 (450)
+..+.+|+. .+|+.++..++-++ ..+++..+...++.+.|++. .. .|.. .+.++.|
T Consensus 314 f~HG~TYsghP---lacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~---~p~V-------------gdVR~~G 374 (449)
T COG0161 314 FMHGHTYSGNP---LACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALAD---HPLV-------------GDVRGLG 374 (449)
T ss_pred eccCCccccCH---HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhccc---CCcE-------------EEeeccc
Confidence 112233333 33333333333322 23344456666777777652 11 0111 1345788
Q ss_pred cEEEEEeCCHH---------HHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeC
Q 013079 353 GLLCLDMETEE---------KANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVG 423 (450)
Q Consensus 353 ~~~~~~l~~~~---------~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g 423 (450)
.+..+++.... ...++...+.. .|++.-.+|... .+.+|-+. .
T Consensus 375 li~~iElv~d~~t~~~f~~~~~~~~~~~~~e---~Gl~iRp~g~~i-~~~PPlii------------------------t 426 (449)
T COG0161 375 LIGAIELVADKATKTPFEARVGARVRAAALE---RGLLIRPLGDVI-YLMPPLII------------------------T 426 (449)
T ss_pred eEEEEEEecccccccchhhhHHHHHHHHHHH---CCeEEeecCCEE-EEcCCccC------------------------C
Confidence 89999987221 13445554433 344444454321 11222222 2
Q ss_pred CCCCHHHHHHHHHHHHHHhhh
Q 013079 424 YLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 424 ~~~~~~~~i~~l~~al~~~~~ 444 (450)
.++++++++.+.++|+....
T Consensus 427 -~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 427 -REEIDELVDALREALDETLA 446 (449)
T ss_pred -HHHHHHHHHHHHHHHHHHHh
Confidence 57888888888888886643
No 342
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.57 E-value=9.4e-13 Score=134.75 Aligned_cols=240 Identities=16% Similarity=0.172 Sum_probs=144.7
Q ss_pred CCChhHHHHHHHHHHHhCC-----CeEEEe-cChHHHHHHHHHHHHHhc-cC-CCEEEEeCCCchhHHHHHHHhC----C
Q 013079 96 HFNPTVLNLSRQMAALEGT-----EAAYCT-ASDKAGMSAISSVLMQLC-SS-GGHVVAARTLYGGTHALLTHFF----P 163 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~-----~~~~~t-sg~~~gt~ai~~al~~l~-~~-gd~Vi~~~~~y~~~~~~~~~~~----~ 163 (450)
..++...++.++|+++... +.++|+ +| |+||+..|++... .+ ..+||.....||+......... .
T Consensus 103 ~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~S---GSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~ 179 (464)
T PRK06938 103 LTTPVKDQFVQDLFASLPEAFAREAKIQFCGPT---GTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGP 179 (464)
T ss_pred cCCHHHHHHHHHHHHhCcccccccceEEEeCCC---cHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccc
Confidence 4577778888888887642 246565 79 9999999998542 22 3578888888988653321110 0
Q ss_pred C-cc-C--eeEEEeCCC-----------------CHHHHHHhhhc-----CCceEEEEecCCCCcccccC----HHHHHH
Q 013079 164 R-AC-N--ITTTFVDIS-----------------DHEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN----IPELSR 213 (450)
Q Consensus 164 ~-~~-g--~~v~~v~~~-----------------d~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~~----l~~I~~ 213 (450)
+ .+ + ..+.+++.. +++.+++.+.. +++.+|++|.++...|.+.+ +++|.+
T Consensus 180 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~ 259 (464)
T PRK06938 180 KKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRR 259 (464)
T ss_pred cccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHH
Confidence 0 00 0 122333321 25667777732 25889999999888888754 889999
Q ss_pred HHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCC
Q 013079 214 LAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPT 286 (450)
Q Consensus 214 la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~ 286 (450)
+|+++|+++|.||+++++.. .-..+.+|+++ ++|.+++ |.++ |.++.++++ +.+... .+..+..|+.
T Consensus 260 lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gKglgg-G~Pl-sAv~~~~~~-~~~~~~-~~~~T~~gnp 333 (464)
T PRK06938 260 ITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV--LSKAIGG-SLPL-AVVVYREWL-DTWQPG-AHAGTFRGNQ 333 (464)
T ss_pred HHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE--eeccccC-CCce-EEEeehhHh-hccCCC-CCCCCCCcCH
Confidence 99999999999999966632 12233578888 8999985 6888 666666553 433211 1122234444
Q ss_pred chHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 287 MNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 287 ~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+...++...+..++. +...++..+..++|.+.|+++..+ +|... +.+|.|.++.+++.
T Consensus 334 la~Aaa~a~L~~l~~-~~l~~~~~~~G~~l~~~L~~l~~~--~~~i~-------------~VrG~Glm~gie~~ 391 (464)
T PRK06938 334 MAMAAGSATLRYIKE-HRLAEHAAAMGERLREHLRQLQRD--YPQLG-------------DVRGRGLMLGVEIV 391 (464)
T ss_pred HHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHh--CCCee-------------eeeccceEEEEEec
Confidence 444444333322211 122334455555666666543111 11100 33478999999985
No 343
>PRK06149 hypothetical protein; Provisional
Probab=99.57 E-value=8.1e-13 Score=146.65 Aligned_cols=257 Identities=15% Similarity=0.139 Sum_probs=153.3
Q ss_pred CCCChhHHHHHHHHHHHh--CCCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHh------CCC
Q 013079 95 RHFNPTVLNLSRQMAALE--GTEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHF------FPR 164 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~--g~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~------~~~ 164 (450)
+..++...++.++|+++. +.+.++|++| |+||+..|++... ....+||+....||+........ .+.
T Consensus 620 ~~~~~~~~elae~L~~~~p~~~~~v~f~~S---GsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~ 696 (972)
T PRK06149 620 RFHYAAVAEFSERLAALAPDGLDTVFLVNS---GSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQ 696 (972)
T ss_pred cccCHHHHHHHHHHHHhCCCCcCEEEEeCC---chHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCcccccc
Confidence 345677889999999988 3578999999 9999999998431 22357888888888744221000 000
Q ss_pred ccC---eeEEEeCC----------CC-----HHHHHHhhh-----cCCceEEEEecCCCCcccccC----HHHHHHHHHh
Q 013079 165 ACN---ITTTFVDI----------SD-----HEMVNSAIV-----QGRTKVLYFESISNPTLAVAN----IPELSRLAHD 217 (450)
Q Consensus 165 ~~g---~~v~~v~~----------~d-----~~~l~~ai~-----~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~ 217 (450)
..+ ..+..++. .+ .+++++.++ .+++.+|++|.+....|.+.+ +++|.++|++
T Consensus 697 ~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~ 776 (972)
T PRK06149 697 ALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRA 776 (972)
T ss_pred ccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHH
Confidence 000 00111111 11 234333331 246789999999988898887 9999999999
Q ss_pred cCCEEEEeCCCCCCCCCc--------cCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchH
Q 013079 218 KGVTVVVDNTFSPLVLSP--------ARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNP 289 (450)
Q Consensus 218 ~gi~livD~~~~~~~~~~--------~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~ 289 (450)
||+++|+||+++++...- ....+|+++ ++|.+|+ |.++ |++++++++.+.+........+..|+.++.
T Consensus 777 ~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt--~gK~lg~-G~Pl-~av~~~~~i~~~~~~~~~~~sT~~gnP~~~ 852 (972)
T PRK06149 777 RGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIIT--MAKGMGN-GHPL-GAVITRREIAEALEAEGYFFSSTGGSPVSC 852 (972)
T ss_pred cCCEEEEEeehhcCCccCccchhhhhcCCCCCEEE--ecccccC-Ceee-EEEEEcHHHHhhhccCCcccCCCCCCHHHH
Confidence 999999999985553211 123478885 8999994 5777 888888888877653111111123333333
Q ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--------C
Q 013079 290 KVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--------T 361 (450)
Q Consensus 290 ~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--------~ 361 (450)
.++...+..++. +...++..+..++|.+.|+++..+ +|... +.+|.|.++.+++. .
T Consensus 853 aaala~L~~i~~-e~l~~~~~~~G~~l~~~L~~l~~~--~~~i~-------------~vrG~Gl~~gvel~~~~~~~~~~ 916 (972)
T PRK06149 853 RIGMAVLDVLRE-EKLQENARRVGDHLKARLEALADR--HPLIG-------------AVHGMGLYLGVELVRDRQTLEPA 916 (972)
T ss_pred HHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHh--CCCeE-------------EEeecceEEEEEEecCcccCCCC
Confidence 333333322211 112233444456666666553111 11100 23478999999984 1
Q ss_pred HHHHHHHHHHhhc
Q 013079 362 EEKANRLMNYLQN 374 (450)
Q Consensus 362 ~~~~~~~~~~l~~ 374 (450)
.+.+..+.+.+..
T Consensus 917 ~~~~~~i~~~l~~ 929 (972)
T PRK06149 917 TEETAAICDRLLE 929 (972)
T ss_pred hHHHHHHHHHHHh
Confidence 2334556666654
No 344
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=1.3e-12 Score=133.88 Aligned_cols=241 Identities=15% Similarity=0.142 Sum_probs=150.8
Q ss_pred CCChhHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHHHHHhcc-------C-CCEEEEeCCCchhHHHHHHHhCCC-
Q 013079 96 HFNPTVLNLSRQMAALEG--TEAAYCTASDKAGMSAISSVLMQLCS-------S-GGHVVAARTLYGGTHALLTHFFPR- 164 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g--~~~~~~tsg~~~gt~ai~~al~~l~~-------~-gd~Vi~~~~~y~~~~~~~~~~~~~- 164 (450)
..++...++.++|+++.. .+.++|++| |+||+..|++.... + ..+||.....||+...........
T Consensus 87 ~~~~~~~~lae~L~~~~p~~~~~v~f~~s---GsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~ 163 (466)
T PRK07030 87 FSHEPVIELSERLVKITPPGLSRCFYADN---GSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVA 163 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCC---cHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCc
Confidence 456778889999999864 467899999 99999999986421 2 357898998998864332111000
Q ss_pred ----ccC---eeEEEeCCC-----------------CHHHHHHhhh--cCCceEEEEec-CCCCcccccC----HHHHHH
Q 013079 165 ----ACN---ITTTFVDIS-----------------DHEMVNSAIV--QGRTKVLYFES-ISNPTLAVAN----IPELSR 213 (450)
Q Consensus 165 ----~~g---~~v~~v~~~-----------------d~~~l~~ai~--~~~t~lv~i~~-~~NptG~v~~----l~~I~~ 213 (450)
..+ ..+..++.. +++++++.+. .+++.+|++|. ++...|.+.+ +++|.+
T Consensus 164 ~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~ 243 (466)
T PRK07030 164 LFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLRE 243 (466)
T ss_pred cccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHH
Confidence 000 012222211 2455677663 25788999998 5777787754 889999
Q ss_pred HHHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCc-cceEEEEEcCHHHHHHHHHHh------hhh
Q 013079 214 LAHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGA-DIIAGAVCGPANLVNSMMDLH------QGA 279 (450)
Q Consensus 214 la~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g-~~igG~l~~~~~~~~~l~~~~------~~~ 279 (450)
+|+++|+++|+||+++++.. ....+.+|+++ ++|.+++ | .++ |.++.++++.+.+.... .+.
T Consensus 244 lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~--~gKgl~g-G~~Pi-~av~~~~ei~~~~~~~~~~~~~~~h~ 319 (466)
T PRK07030 244 ACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLC--LSKALTG-GYLPL-AAVLTTDTVYQAFYDDYPTLRAFLHS 319 (466)
T ss_pred HHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEe--eehhccC-Ccccc-eEEEecHHHHHHHhcccccccccccC
Confidence 99999999999999866632 22233578988 7999995 6 477 88888888887764210 112
Q ss_pred hhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEe
Q 013079 280 LMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDM 359 (450)
Q Consensus 280 ~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l 359 (450)
.+..|+.+...++...+..++. +...++..+..++|.+.|+++. + +|.+. +.+|.|.++.+++
T Consensus 320 ~T~~gnpla~aaa~a~L~~i~~-~~l~~~~~~~G~~l~~~L~~l~-~--~~~v~-------------~vrG~Gl~~gie~ 382 (466)
T PRK07030 320 HSYTGNPLACAAALATLDIFEQ-DNVIENNRALARRMAEATAHLA-D--HPHVA-------------EVRQTGMILAIEM 382 (466)
T ss_pred CCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHh-c--CCCEE-------------EeEeceeEEEEEe
Confidence 2233444443333333322221 1123445556667777776542 1 22111 2347899999998
Q ss_pred C
Q 013079 360 E 360 (450)
Q Consensus 360 ~ 360 (450)
.
T Consensus 383 ~ 383 (466)
T PRK07030 383 V 383 (466)
T ss_pred c
Confidence 5
No 345
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.55 E-value=5.6e-13 Score=135.09 Aligned_cols=171 Identities=15% Similarity=0.193 Sum_probs=120.6
Q ss_pred CCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHhc-cCC-CEEEEeCCCchhHHHH-HH--HhC------
Q 013079 96 HFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQLC-SSG-GHVVAARTLYGGTHAL-LT--HFF------ 162 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l~-~~g-d~Vi~~~~~y~~~~~~-~~--~~~------ 162 (450)
..++...++.++|.++.+. +.+.|++| |+||+..|++... -.| .+|+.....||+.... +. ...
T Consensus 90 ~~~~~~~~la~~L~~~~~~~~~~v~f~~S---GsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~ 166 (433)
T PRK00615 90 LTSEQEILFAEELFSYLGLEDHKIRFVSS---GTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDT 166 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCCcCEEEEeCc---hHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCc
Confidence 3467778889999888754 47899999 9999999998542 123 5788888889885421 10 000
Q ss_pred -CCcc-----CeeEEEeCCCCHHHHHHhhhc--CCceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCC
Q 013079 163 -PRAC-----NITTTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSP 230 (450)
Q Consensus 163 -~~~~-----g~~v~~v~~~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~ 230 (450)
+... ......++..|++++++.+.. +++.+|++|.+....|.+.| +++|.++|++||+++|+||++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG 246 (433)
T PRK00615 167 LTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTG 246 (433)
T ss_pred CCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 0000 011122344588888888732 46789999999988898876 56999999999999999999865
Q ss_pred CCC------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHH
Q 013079 231 LVL------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMM 273 (450)
Q Consensus 231 ~~~------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~ 273 (450)
+.. .-..+..|+++ ++|.+|+ |.++ |++++++++++.+.
T Consensus 247 ~R~G~~ga~~~~gv~PDi~~--~gK~lgg-G~p~-~av~~~~~i~~~~~ 291 (433)
T PRK00615 247 FRVAQGGAAAIYHVKPDITV--YGKILGG-GLPA-AAVVAHKSIMDHLA 291 (433)
T ss_pred ccccHhHHHHhcCCCCCeEE--EcccccC-Ccce-eeeeecHHHHhhhc
Confidence 521 11223578876 8999984 4665 88889998888774
No 346
>PRK15029 arginine decarboxylase; Provisional
Probab=99.54 E-value=4e-13 Score=142.32 Aligned_cols=155 Identities=13% Similarity=0.076 Sum_probs=124.7
Q ss_pred CChhHHHHHHHHHHHhCCCeE-EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 97 FNPTVLNLSRQMAALEGTEAA-YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~-~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
....+.++++..|+++|++.. ++|+| .|.+|.+++.+++++||.|++.+.+|.++...+. +.|..++|+.+
T Consensus 203 p~G~I~eAq~~aA~~fgA~~t~FlvNG---ST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~-----L~ga~Pvyl~P 274 (755)
T PRK15029 203 HTGAFGESEKYAARVFGADRSWSVVVG---TSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLI-----LTGAKPVYMVP 274 (755)
T ss_pred CCcHHHHHHHHHHHHhCCCcEEEEeCC---hhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH-----HcCCeEEEecc
Confidence 345689999999999999886 66788 8889999999999999999999999999998875 47888888864
Q ss_pred C----------C-----HHHHHHhhhc-CCce--------EEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CC
Q 013079 176 S----------D-----HEMVNSAIVQ-GRTK--------VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SP 230 (450)
Q Consensus 176 ~----------d-----~~~l~~ai~~-~~t~--------lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~ 230 (450)
. + ++.++++++. +.++ +|++++|+. -|.+.++++|+++|+++++++++||++ ++
T Consensus 275 ~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah 353 (755)
T PRK15029 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_pred cccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccc
Confidence 2 3 8889888832 2344 888888764 699999999999999999999999998 44
Q ss_pred CCC-------Ccc-----C-CCCe-EEEeCCCCccccCccceEEEE
Q 013079 231 LVL-------SPA-----R-LGAD-VVVHSISKFISGGADIIAGAV 262 (450)
Q Consensus 231 ~~~-------~~~-----~-~g~d-i~~~S~sK~~g~~g~~igG~l 262 (450)
+.+ +.. . .|+| +++.|.||.++. ...+.++
T Consensus 354 ~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a--lTQaS~L 397 (755)
T PRK15029 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA--LSQASYI 397 (755)
T ss_pred cccCccccccccccccccccCCCceEEEEchhhcccc--hhhhhhh
Confidence 432 222 2 5788 999999999974 3344555
No 347
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.53 E-value=9.1e-13 Score=125.20 Aligned_cols=247 Identities=15% Similarity=0.157 Sum_probs=154.7
Q ss_pred ccccCCCChhHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHHHHHh-ccCC-CEEEEeCCCchhHHHHHHHh---CC
Q 013079 91 FIYSRHFNPTVLNLSRQMAALEGT--EAAYCTASDKAGMSAISSVLMQL-CSSG-GHVVAARTLYGGTHALLTHF---FP 163 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~g~--~~~~~tsg~~~gt~ai~~al~~l-~~~g-d~Vi~~~~~y~~~~~~~~~~---~~ 163 (450)
|...-+.++.+.++.+.|++.+-. ..++|++| |+|||.++++.. .-.| -+||.-+.+|++.......+ .+
T Consensus 84 H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~ns---GsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~ 160 (442)
T KOG1404|consen 84 HTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNS---GSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSP 160 (442)
T ss_pred EeeccccCCcHHHHHHHHHHhCCCCceEEEEecC---CchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCc
Confidence 556667788888899998888754 45799999 999999999754 2222 37888888888754432111 00
Q ss_pred Ccc---Ce--eEE-EeCCC--------C---------HHHHHHhhh---cCCceEEEEecCCCCcccccC----HHHHHH
Q 013079 164 RAC---NI--TTT-FVDIS--------D---------HEMVNSAIV---QGRTKVLYFESISNPTLAVAN----IPELSR 213 (450)
Q Consensus 164 ~~~---g~--~v~-~v~~~--------d---------~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~----l~~I~~ 213 (450)
... +. -+. ...++ + .+++++.+. .+...+.+.|+++..-|.+++ +++..+
T Consensus 161 ~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~ 240 (442)
T KOG1404|consen 161 WKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYK 240 (442)
T ss_pred ccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHH
Confidence 000 00 000 00111 1 134444442 235677888999998899865 889999
Q ss_pred HHHhcCCEEEEeCCCCCCCC-----CccCCC--CeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCC
Q 013079 214 LAHDKGVTVVVDNTFSPLVL-----SPARLG--ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPT 286 (450)
Q Consensus 214 la~~~gi~livD~~~~~~~~-----~~~~~g--~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~ 286 (450)
+|+++|.++|.||+|+++.. .....+ .|+++ +.|.+| .|.++ |+++..+++.+-+.....+..+..|+.
T Consensus 241 ~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvT--mAKgiG-nG~Pl-~AVvtt~EIa~v~~~~~~~fnTyggnP 316 (442)
T KOG1404|consen 241 VVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVT--MAKGIG-NGFPL-GAVVTTPEIADVLNQKSSHFNTYGGNP 316 (442)
T ss_pred HHHHcCCEEEehhhhhccccccccccccccCCCccHHH--HHhhcc-CCCcc-eeeecCHHHHHHHHhccccccccCCCc
Confidence 99999999999999966642 222333 46655 999999 56888 888888889888876554444455665
Q ss_pred chHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 287 MNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 287 ~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+...++.+.+.-++. +...++......+|.+.|.+...+ +|-+. +.+|.|.|+.+++-
T Consensus 317 ~a~avg~aVL~Vike-e~LqE~aa~vG~yl~~~l~~l~d~--h~iIG-------------dVRG~GLm~GvE~V 374 (442)
T KOG1404|consen 317 VACAVGLAVLKVIKE-ENLQENAAEVGSYLLEKLAALKDK--HPIIG-------------DVRGRGLMLGVELV 374 (442)
T ss_pred hhHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhc--CCcee-------------ecccceeEEEEEEe
Confidence 555555444432221 112223344455666666554221 11111 44588999999985
No 348
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.52 E-value=2.8e-12 Score=131.15 Aligned_cols=240 Identities=12% Similarity=0.163 Sum_probs=141.9
Q ss_pred CCChhHHHHHHHHHHHhCCC----eE-EEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCC----C
Q 013079 96 HFNPTVLNLSRQMAALEGTE----AA-YCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFP----R 164 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g~~----~~-~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~----~ 164 (450)
..++...++.++|+++.... .. ++++| |+||+..|++... ...++|+.....||+.......... +
T Consensus 98 ~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~S---GsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~ 174 (459)
T PRK06931 98 LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPS---GADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPK 174 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCccccceEEEeCCC---cHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccc
Confidence 45677888999999887522 24 55589 9999999998542 2345788899999887644321100 0
Q ss_pred ----ccCeeEEEeCCCC-------------HHHH----HHhhh-----cCCceEEEEecCCCCcccccC----HHHHHHH
Q 013079 165 ----ACNITTTFVDISD-------------HEMV----NSAIV-----QGRTKVLYFESISNPTLAVAN----IPELSRL 214 (450)
Q Consensus 165 ----~~g~~v~~v~~~d-------------~~~l----~~ai~-----~~~t~lv~i~~~~NptG~v~~----l~~I~~l 214 (450)
.....+.+++..+ .+.+ ++.+. .+++.+|++|.++...|.+.+ +++|.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~l 254 (459)
T PRK06931 175 NAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREV 254 (459)
T ss_pred cCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHH
Confidence 0011233333221 2222 33331 135789999999888887754 8899999
Q ss_pred HHhcCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCc
Q 013079 215 AHDKGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTM 287 (450)
Q Consensus 215 a~~~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~ 287 (450)
|+++|+++|.||+++++.. .-..+.+|+++ ++|.+++ |.++ |.++.++++ +.+... .+..+..|+.+
T Consensus 255 c~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~g-G~Pi-~av~~~~~~-~~~~~~-~~~~T~~gnpl 328 (459)
T PRK06931 255 TQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVGG-GLPL-AVLGIKKEF-DAWQPG-GHTGTFRGNQL 328 (459)
T ss_pred HHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--ecccccC-Ccce-eeeeeHHHH-hhccCC-CCCCCCCCCHH
Confidence 9999999999999966631 22233578888 8999995 6888 666666553 444211 11223445554
Q ss_pred hHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 288 NPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 288 ~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
+..++...+..++. ....++..+..++|.+.|+++..+ +|... +.+|.|.++.+++.
T Consensus 329 a~aaala~L~~l~~-~~l~~~~~~~G~~l~~~L~~l~~~--~~~i~-------------~vrG~Glm~giel~ 385 (459)
T PRK06931 329 AMATGLTTLKILKE-ENLAQNAAERGEWLKAQLAELQKR--YPCIG-------------NVRGRGLMIGIEIV 385 (459)
T ss_pred HHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHh--CCCeE-------------eEecCceEEEEEEc
Confidence 44444443332211 112233444445555555543111 11100 23478999999985
No 349
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.52 E-value=4.3e-12 Score=125.15 Aligned_cols=247 Identities=15% Similarity=0.084 Sum_probs=150.7
Q ss_pred ccccCcccc-CCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhcc-
Q 013079 62 IEASATFTV-MEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCS- 139 (450)
Q Consensus 62 i~~att~~~-~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~- 139 (450)
-..|+|.+- ++.+....++. | .-.|+ .+|++.+|++.+++++|-+.+++|.+ |..+..+++..+++
T Consensus 45 DLrSDTgT~apS~~m~aAM~~---G----DD~Y~--gdpSv~~Lee~vael~G~E~alpthq---GRgaE~Il~~~~~~~ 112 (467)
T TIGR02617 45 DLLTDSGTGAVTQSMQAAMMR---G----DEAYS--GSRSYYALAESVKNIFGYQYTIPTHQ---GRGAEQIYIPVLIKK 112 (467)
T ss_pred ECccCCCCCCCCHHHHHHHHc---C----Ccccc--cCchHHHHHHHHHHHhCCceEEECCC---CchHHHHHHHhhccc
Confidence 456778773 66555555553 2 23355 67899999999999999999999999 99999999998888
Q ss_pred CCCEEEEeC--------CCchhHHHHHHHhCCCccCeeEEEe------------C---CCCHHHHHHhhhc---CCceEE
Q 013079 140 SGGHVVAAR--------TLYGGTHALLTHFFPRACNITTTFV------------D---ISDHEMVNSAIVQ---GRTKVL 193 (450)
Q Consensus 140 ~gd~Vi~~~--------~~y~~~~~~~~~~~~~~~g~~v~~v------------~---~~d~~~l~~ai~~---~~t~lv 193 (450)
+|+++++.. .-|........ +.|+.+..+ + ..|+++|+++|.. ++.-.+
T Consensus 113 ~g~e~g~~~~~~~v~hn~~fett~g~a~-----l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v 187 (467)
T TIGR02617 113 REQEKGLDRSKMVAFSNYFFDTTQGHSQ-----INGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYI 187 (467)
T ss_pred ccccccccccccccceEEEEecchHHHH-----HcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceee
Confidence 566665332 22332222221 235443332 1 1289999999942 233344
Q ss_pred EEecCCCCc-cccc---CHHHHHHHHHhcCCEEEEeCCC-C---CC---------CCCccC------CCCeEEEeCCCCc
Q 013079 194 YFESISNPT-LAVA---NIPELSRLAHDKGVTVVVDNTF-S---PL---------VLSPAR------LGADVVVHSISKF 250 (450)
Q Consensus 194 ~i~~~~Npt-G~v~---~l~~I~~la~~~gi~livD~~~-~---~~---------~~~~~~------~g~di~~~S~sK~ 250 (450)
.+.-.+|-. |.+. .++++.++|++||+++|.|.+- . .+ ..++.+ -.+|.++.|++|.
T Consensus 188 ~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKg 267 (467)
T TIGR02617 188 VATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKD 267 (467)
T ss_pred eeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCC
Confidence 433344544 4444 4779999999999999999873 1 11 122221 2589999999999
Q ss_pred cccCccceEEEEEcCHH----HHHHHHHHhh---hhhhccCCCchHHHHHHHHccCCc-H-HHHHHHHHHHHHHHHHHHH
Q 013079 251 ISGGADIIAGAVCGPAN----LVNSMMDLHQ---GALMLLGPTMNPKVAFELSERIPH-L-GLRMKEHCHRALIFARRMK 321 (450)
Q Consensus 251 ~g~~g~~igG~l~~~~~----~~~~l~~~~~---~~~~~~g~~~~~~~a~~~~~~~~~-l-~~~~~~~~~~~~~l~~~L~ 321 (450)
++.+ +||+++++++ +.++++...- +.. ..| .++.....++..++.+ + ...++......++|.+.|.
T Consensus 268 lgAp---vGg~Lag~d~~~~~l~~~~~~~~i~~EGf~-tYG-Glagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~ 342 (467)
T TIGR02617 268 AMVP---MGGLLCFKDDSFFDVYTECRTLCVVQEGFP-TYG-GLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLE 342 (467)
T ss_pred CCCc---ccceEEecchhHHHHHHHHHhhcccccCCc-CcC-chhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHH
Confidence 9977 6788887654 3344433211 221 222 2232222222223322 2 2233333455678999999
Q ss_pred hCCCeeeCC
Q 013079 322 KLGLKVLYP 330 (450)
Q Consensus 322 ~~~~~v~~p 330 (450)
+.|..+..+
T Consensus 343 ~~Gvpi~~~ 351 (467)
T TIGR02617 343 EIGVVCQQA 351 (467)
T ss_pred hCCCcEEec
Confidence 988755443
No 350
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.51 E-value=5e-12 Score=132.86 Aligned_cols=153 Identities=14% Similarity=0.159 Sum_probs=120.4
Q ss_pred ChhHHHHHHHHHHHhCCCeE-EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHH-HHHhCCCccCeeEEEeCC
Q 013079 98 NPTVLNLSRQMAALEGTEAA-YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHAL-LTHFFPRACNITTTFVDI 175 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~-~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~-~~~~~~~~~g~~v~~v~~ 175 (450)
.....++++..|+++|++.. ++++| .|.+|.+++.+++.+||.|++.+.+|.++... +. +.|..++|+.+
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNG---TS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLi-----LsGa~PVYl~P 244 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNG---TSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALI-----QAGATPVYLET 244 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCC---hhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHH-----HcCCeEEEeec
Confidence 34678999999999999887 56778 88899999999999999999999999998874 43 36888888754
Q ss_pred C----------C-----HHHHHHhhhcC--C-------ceEEEEecCCCCcccccCHHHHHHH-HHhcCCEEEEeCCC-C
Q 013079 176 S----------D-----HEMVNSAIVQG--R-------TKVLYFESISNPTLAVANIPELSRL-AHDKGVTVVVDNTF-S 229 (450)
Q Consensus 176 ~----------d-----~~~l~~ai~~~--~-------t~lv~i~~~~NptG~v~~l~~I~~l-a~~~gi~livD~~~-~ 229 (450)
. + .+.++++|+.. + .++++|++|+. -|.+.++++|+++ ++.++ ++++|++| +
T Consensus 245 ~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 245 ARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred cccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchh
Confidence 2 3 45588888322 1 58899888754 6999999999999 67778 99999998 5
Q ss_pred CCCCCc---------cCCCCe----EEEeCCCCccccCccceEEEE
Q 013079 230 PLVLSP---------ARLGAD----VVVHSISKFISGGADIIAGAV 262 (450)
Q Consensus 230 ~~~~~~---------~~~g~d----i~~~S~sK~~g~~g~~igG~l 262 (450)
++.+.+ .+.|+| +++.|.||.+++ ...+.++
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a--lTQaS~L 366 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG--FSQTSQI 366 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh--hhhHhhh
Confidence 554444 244899 999999999974 3344555
No 351
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.51 E-value=1.8e-11 Score=116.86 Aligned_cols=249 Identities=14% Similarity=0.130 Sum_probs=154.2
Q ss_pred HHHHHHHHHHHh-CCC-------e--EEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCCCccCe
Q 013079 101 VLNLSRQMAALE-GTE-------A--AYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPRACNI 168 (450)
Q Consensus 101 ~~~l~~~iA~l~-g~~-------~--~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~ 168 (450)
...+.+.+++++ |.+ . .+-|.| ||.|+..+..-+. .+...|.+++|+|+.+...+. ..|.
T Consensus 71 ~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~G---GTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~-----~aGl 142 (396)
T COG1448 71 LPEFLEAVQKLLFGADSPALAEDRVATVQTLG---GTGALRVAADFLARFFPDATVWISDPTWPNHKAIFE-----AAGL 142 (396)
T ss_pred cHHHHHHHHHHhcCCCcHHHHhhhHhheecCC---cchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHH-----hcCC
Confidence 455667777754 533 1 377899 9999999887663 345579999999999998886 3677
Q ss_pred eEEEeCCC-------CHHHHHHhhhc-CCceEEEE-ecCCCCccccc---CHHHHHHHHHhcCCEEEEeCCCCCCCCC--
Q 013079 169 TTTFVDIS-------DHEMVNSAIVQ-GRTKVLYF-ESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTFSPLVLS-- 234 (450)
Q Consensus 169 ~v~~v~~~-------d~~~l~~ai~~-~~t~lv~i-~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~~~~~~~-- 234 (450)
++..++.- |.+.+.+.+.+ ++..+|++ ...|||||.-. ..++|+++.+++|.+-++|-+|.+|.-.
T Consensus 143 ~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~Gle 222 (396)
T COG1448 143 EVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLE 222 (396)
T ss_pred ceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchH
Confidence 77655432 67777666632 22334444 45799999875 4778999999999999999998655421
Q ss_pred --cc------CCC-CeEEEeCCCCccccCccceEEEEE-c-CHHHHHHHH----HHhhhhhhccCCCchHHHHHHHHcc-
Q 013079 235 --PA------RLG-ADVVVHSISKFISGGADIIAGAVC-G-PANLVNSMM----DLHQGALMLLGPTMNPKVAFELSER- 298 (450)
Q Consensus 235 --~~------~~g-~di~~~S~sK~~g~~g~~igG~l~-~-~~~~~~~l~----~~~~~~~~~~g~~~~~~~a~~~~~~- 298 (450)
.. ..+ --+++.|+||.+|.-|.|+|++.+ + +.+...++. ...+. ..+.++......+...+..
T Consensus 223 eDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~-~ySnPP~~Ga~vva~IL~~p 301 (396)
T COG1448 223 EDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRT-NYSNPPAHGAAVVATILNNP 301 (396)
T ss_pred HHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHh-ccCCCchhhHHHHHHHhCCH
Confidence 11 112 268999999999999999965543 2 344444432 22221 1122333333333332221
Q ss_pred ------CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHh
Q 013079 299 ------IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYL 372 (450)
Q Consensus 299 ------~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l 372 (450)
..++...++++.+.|..|.+.|++++..-....+. ..-||+++.=-+.+++.++.++.
T Consensus 302 ~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~----------------~Q~GMFsy~Gls~~QV~rLree~ 365 (396)
T COG1448 302 ELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFII----------------SQRGMFSYTGLSPEQVDRLREEF 365 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHh----------------hcCceeecCCCCHHHHHHHHHhc
Confidence 12344555677888889999998854311111111 12347777633666666665554
Q ss_pred hc
Q 013079 373 QN 374 (450)
Q Consensus 373 ~~ 374 (450)
.+
T Consensus 366 ~I 367 (396)
T COG1448 366 GI 367 (396)
T ss_pred cE
Confidence 43
No 352
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.50 E-value=1.2e-11 Score=126.16 Aligned_cols=253 Identities=13% Similarity=0.176 Sum_probs=146.0
Q ss_pred CCChhHHHHHHHHHHHhC---CCeEEEecChHHHHHHHHHHHHHhcc--------C------CCEEEEeCCCchhHHHHH
Q 013079 96 HFNPTVLNLSRQMAALEG---TEAAYCTASDKAGMSAISSVLMQLCS--------S------GGHVVAARTLYGGTHALL 158 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~l~g---~~~~~~tsg~~~gt~ai~~al~~l~~--------~------gd~Vi~~~~~y~~~~~~~ 158 (450)
..++...++.++|+++.+ .+.++|++| |+||+..|++.... . ..+||.....||+.....
T Consensus 89 ~~~~~~~~la~~l~~~~~p~~~~~v~f~~S---GsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~a 165 (443)
T PRK08297 89 VYTVEMARFVDTFARVLGDPELPHLFFVDG---GALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYT 165 (443)
T ss_pred cCCHHHHHHHHHHHhhcCCCCCCEEEEeCc---hHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhh
Confidence 345677788888988862 367899999 99999999986520 1 257999999998865432
Q ss_pred HHhCC-----C----ccC---eeEEEe--CC-------------CCHHHHHHhhh--cCCceEEEEecCCCCcccccC--
Q 013079 159 THFFP-----R----ACN---ITTTFV--DI-------------SDHEMVNSAIV--QGRTKVLYFESISNPTLAVAN-- 207 (450)
Q Consensus 159 ~~~~~-----~----~~g---~~v~~v--~~-------------~d~~~l~~ai~--~~~t~lv~i~~~~NptG~v~~-- 207 (450)
..... + ..+ +...++ +. .+++++++.+. .+++.+|++|.++...|.+.+
T Consensus 166 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~ 245 (443)
T PRK08297 166 LSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRP 245 (443)
T ss_pred hhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCH
Confidence 11100 0 000 000011 00 02345556662 257899999999888888743
Q ss_pred --HHHHHHHHHhcCCEEEEeCCCCCCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHH-Hh-
Q 013079 208 --IPELSRLAHDKGVTVVVDNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMD-LH- 276 (450)
Q Consensus 208 --l~~I~~la~~~gi~livD~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~-~~- 276 (450)
+++|.++|++||+++|+||+++++... -....+|+++ ++|.++ ++|++.++ ++.+.+.. ..
T Consensus 246 ~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~~~-~i~~~~~~~~~~ 317 (443)
T PRK08297 246 EFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMAGR-RVDEVEDNVFAV 317 (443)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--eccccc-----ccceecch-HHHHhhhhhccC
Confidence 889999999999999999999666322 1233578887 899874 33555554 32221111 10
Q ss_pred --hhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcE
Q 013079 277 --QGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGL 354 (450)
Q Consensus 277 --~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~ 354 (450)
....+..++.++..++...+..++. ....++..+..+++.+.|+++..+ +|.... +.+|.|.+
T Consensus 318 ~~~~~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~~~~------------~vrg~G~~ 382 (443)
T PRK08297 318 SSRINSTWGGNLVDMVRARRILEVIEE-DGLVENAARQGEYLLARLEELAAE--FPAVVS------------NVRGRGLM 382 (443)
T ss_pred ccccCCCCCccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHH--CCCcce------------eeeccceE
Confidence 1122233444443333333332211 123344455555666666543111 111000 12267889
Q ss_pred EEEEeCCHHHHHHHHHHhhc
Q 013079 355 LCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 355 ~~~~l~~~~~~~~~~~~l~~ 374 (450)
+.+++.+.+....+...+..
T Consensus 383 ~~i~~~~~~~~~~~~~~l~~ 402 (443)
T PRK08297 383 CAFDLPTTADRDEVIRRLWE 402 (443)
T ss_pred EEEEecCHHHHHHHHHHHHH
Confidence 99999865555667766654
No 353
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.49 E-value=8.1e-13 Score=131.45 Aligned_cols=222 Identities=14% Similarity=0.154 Sum_probs=141.7
Q ss_pred CChhHHHHHH----HHHHHhCCC---------eEEEecChHHHHHHHHHHHHHhcc--------CC-----C-EEEEeCC
Q 013079 97 FNPTVLNLSR----QMAALEGTE---------AAYCTASDKAGMSAISSVLMQLCS--------SG-----G-HVVAART 149 (450)
Q Consensus 97 ~~~~~~~l~~----~iA~l~g~~---------~~~~tsg~~~gt~ai~~al~~l~~--------~g-----d-~Vi~~~~ 149 (450)
..|...++|. .+++++|.+ .-+||+| ||+||..++.+..+ .| + .|+++..
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~G---gt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~ 149 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSG---GTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQ 149 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESS---HHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETT
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEecc---chHHHHHHHHHHHHHHhhhhhhcccccccccccccccc
Confidence 4566655555 566667755 3599999 99999988865421 12 2 5778888
Q ss_pred CchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcC----Cce-EEEEecCCCCcccccCHHHHHHHHHhcC
Q 013079 150 LYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQG----RTK-VLYFESISNPTLAVANIPELSRLAHDKG 219 (450)
Q Consensus 150 ~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~----~t~-lv~i~~~~NptG~v~~l~~I~~la~~~g 219 (450)
.|.+....+. ++|+.++.|+.+ |+++|++++... ++- +|+....+..+|.+.|+++|+++|++++
T Consensus 150 aH~S~~Kaa~-----~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~ 224 (373)
T PF00282_consen 150 AHYSIEKAAR-----ILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYN 224 (373)
T ss_dssp S-THHHHHHH-----HTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT
T ss_pred cccHHHHhcc-----eeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccc
Confidence 9999988875 466667777655 788888887321 223 5666777889999999999999999999
Q ss_pred CEEEEeCCCCC-CCC----CccCC---CCeEEEeCCCCccccCccceEEEE-EcCHHHHHHHHHHhhhhhh---------
Q 013079 220 VTVVVDNTFSP-LVL----SPARL---GADVVVHSISKFISGGADIIAGAV-CGPANLVNSMMDLHQGALM--------- 281 (450)
Q Consensus 220 i~livD~~~~~-~~~----~~~~~---g~di~~~S~sK~~g~~g~~igG~l-~~~~~~~~~l~~~~~~~~~--------- 281 (450)
+++|||++|++ ..+ ..... .+|-++.+.||+++.|-. . |++ +.++............+..
T Consensus 225 ~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~-~-~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~ 302 (373)
T PF00282_consen 225 IWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYG-C-GVLLVRDKSDLRDAFSINADYLGNDDRESDES 302 (373)
T ss_dssp -EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS---EEEEESSGGGHHGGGEEEETCTT-S-SSS-GG
T ss_pred eeeeecccccccccccccccccccccccccccccchhhhhcCCcc-c-eeEEeecccchHHHhccChhhhcccccccccc
Confidence 99999999955 221 11111 589999999999997754 4 555 5555544332100000000
Q ss_pred -------ccCCC-chHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eee
Q 013079 282 -------LLGPT-MNPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGL-KVL 328 (450)
Q Consensus 282 -------~~g~~-~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~ 328 (450)
..++- .....+|..++ +.+.+.+++++..++++++.+.|++.+. ++.
T Consensus 303 ~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~ 360 (373)
T PF00282_consen 303 YDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELV 360 (373)
T ss_dssp GCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred cccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 01111 12233444333 4566788889999999999999999875 544
No 354
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.49 E-value=3.1e-13 Score=133.22 Aligned_cols=238 Identities=17% Similarity=0.219 Sum_probs=149.9
Q ss_pred cCCCChhHHHHHHHHHHHh--CCCeEEEecChHHHHHHHHHHHHHhc-------c-CCCEEEEeCCCchhHHHHH-H---
Q 013079 94 SRHFNPTVLNLSRQMAALE--GTEAAYCTASDKAGMSAISSVLMQLC-------S-SGGHVVAARTLYGGTHALL-T--- 159 (450)
Q Consensus 94 ~r~~~~~~~~l~~~iA~l~--g~~~~~~tsg~~~gt~ai~~al~~l~-------~-~gd~Vi~~~~~y~~~~~~~-~--- 159 (450)
....++...++.++|.++. +.+.++|++| |++|+..|++... . ...+|+.....||+..... .
T Consensus 54 ~~~~~~~~~~la~~L~~~~p~~~~~v~f~~s---GseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~ 130 (339)
T PF00202_consen 54 SGFTHPEAAELAEKLAELFPGGLDRVFFANS---GSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTG 130 (339)
T ss_dssp TTSEEHHHHHHHHHHHHHSSTTEEEEEEESS---HHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSS
T ss_pred cceeccchhhhhhhhhhccccccceeeeccC---chHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccC
Confidence 4556788899999999999 4567899999 9999999998654 1 2368999999998743221 1
Q ss_pred -----HhCCCccCeeEEEeCCCCHHH----------HHHh---hhcCCceEEEEecCCCCcccccC----HHHHHHHHHh
Q 013079 160 -----HFFPRACNITTTFVDISDHEM----------VNSA---IVQGRTKVLYFESISNPTLAVAN----IPELSRLAHD 217 (450)
Q Consensus 160 -----~~~~~~~g~~v~~v~~~d~~~----------l~~a---i~~~~t~lv~i~~~~NptG~v~~----l~~I~~la~~ 217 (450)
..... ....+..+|.+++.. +++. ...+++.+|++|+++...|.+.+ +++|.++|++
T Consensus 131 ~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~ 209 (339)
T PF00202_consen 131 NPPYRKGFGP-LYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCRE 209 (339)
T ss_dssp STHHHTTTCS-SSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHH
T ss_pred Cccccccccc-cccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccc
Confidence 11111 122456677776655 2222 22467889999999888887642 8999999999
Q ss_pred cCCEEEEeCCCCCCCC-------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHH
Q 013079 218 KGVTVVVDNTFSPLVL-------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPK 290 (450)
Q Consensus 218 ~gi~livD~~~~~~~~-------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~ 290 (450)
+|+++|+||+++++.. ....+.+|+++ ++|.+++. .++ |.++.++++.+.+..... ..+..++..+..
T Consensus 210 ~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~p~-sav~~~~~i~~~~~~~~~-~~T~~g~p~~~a 284 (339)
T PF00202_consen 210 HGILLIADEVQTGFGRTGKFFASEHYGVDPDIVT--FGKGLGGG-LPI-SAVLGSEEIMEAFQPGSH-GSTFGGNPLSCA 284 (339)
T ss_dssp TT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEE--EEGGGGTT-SSE-EEEEEEHHHHTTSCTTSS-TCTTTT-HHHHH
T ss_pred cccceecccccccccccCCccceecccccCcccc--cccchhhh-hhc-ccccccchhhcccccccc-ccccccchHhhh
Confidence 9999999999966632 11233579998 56999964 888 888888888776532221 222334444444
Q ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhC----CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC
Q 013079 291 VAFELSERIPHLGLRMKEHCHRALIFARRMKKL----GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME 360 (450)
Q Consensus 291 ~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~----~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~ 360 (450)
++...+..++.. ...++..+..+++.+.|+++ +. +. ..+|.|.++.+++.
T Consensus 285 aa~~~l~~~~~~-~~~~~~~~~g~~l~~~L~~l~~~~~~-i~------------------~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 285 AALATLEILEEE-DLLERVRELGERLREGLRELAARYPL-IG------------------EVRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHTTT-EE------------------EEEEETTEEEEEES
T ss_pred hhhhHHHhhccH-HHHHHHHHHHHHHHHHHHHHHHhCCC-eE------------------EEeeeCeEEEEEEE
Confidence 443333322211 12233344445555555432 22 10 22368889999875
No 355
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.48 E-value=2.3e-11 Score=130.86 Aligned_cols=197 Identities=13% Similarity=0.139 Sum_probs=124.8
Q ss_pred CCCChhHHHHHHHHHHHhC---CCeEEEecChHHHHHHHHHHHHHhcc---------------------CCCEEEEeCCC
Q 013079 95 RHFNPTVLNLSRQMAALEG---TEAAYCTASDKAGMSAISSVLMQLCS---------------------SGGHVVAARTL 150 (450)
Q Consensus 95 r~~~~~~~~l~~~iA~l~g---~~~~~~tsg~~~gt~ai~~al~~l~~---------------------~gd~Vi~~~~~ 150 (450)
...++...+|.++|++..+ .+.++|++| |++|+..|++...+ ...+||.....
T Consensus 405 ~~~hepa~~LAe~L~~~~~~~~l~rVffs~s---GSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gs 481 (817)
T PLN02974 405 ENVHEPALRAAELLLGGPGKGWASRVFFSDN---GSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGS 481 (817)
T ss_pred ccCCHHHHHHHHHHHhccCCCCCCEEEECCc---hHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCC
Confidence 3467778888999988765 257899999 99999999975421 12369999988
Q ss_pred chhHHHHHHHhC-----------CCcc--CeeE----EE---------eCCC----------------------------
Q 013079 151 YGGTHALLTHFF-----------PRAC--NITT----TF---------VDIS---------------------------- 176 (450)
Q Consensus 151 y~~~~~~~~~~~-----------~~~~--g~~v----~~---------v~~~---------------------------- 176 (450)
||+......... +... +..+ .+ ++..
T Consensus 482 YHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~ 561 (817)
T PLN02974 482 YHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPL 561 (817)
T ss_pred cCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhh
Confidence 887332211110 0000 0000 00 0000
Q ss_pred ---CHHHHHHhhh-------cCCceEEEEecC-CCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCC-------C
Q 013079 177 ---DHEMVNSAIV-------QGRTKVLYFESI-SNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVL-------S 234 (450)
Q Consensus 177 ---d~~~l~~ai~-------~~~t~lv~i~~~-~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~-------~ 234 (450)
..+.+++.|. .+++.+|++|.+ +...|.+.+ +++|.++|++||+++|.||+++++.. +
T Consensus 562 ~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e 641 (817)
T PLN02974 562 AKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWE 641 (817)
T ss_pred hHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHH
Confidence 0144566552 146789999995 777788754 88999999999999999999976632 2
Q ss_pred ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh-----hhhhhccCCCchHHHHHHHHc
Q 013079 235 PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH-----QGALMLLGPTMNPKVAFELSE 297 (450)
Q Consensus 235 ~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~-----~~~~~~~g~~~~~~~a~~~~~ 297 (450)
......|+++ ++|.+++.-.++ |++++++++.+.+.... .+..++.|+.+...++...+.
T Consensus 642 ~~gv~PDIi~--~gKgLtgG~~Pl-aa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~ 706 (817)
T PLN02974 642 LLGCKPDIAC--YAKLLTGGLVPL-AATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQ 706 (817)
T ss_pred hcCCCCCEEe--ecccccCCCCcc-EEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHH
Confidence 2233478888 999999533578 88888888888774210 122334555555555544443
No 356
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=8.3e-12 Score=119.59 Aligned_cols=223 Identities=13% Similarity=0.139 Sum_probs=143.3
Q ss_pred ccccCCCChhHHHHHHHHHHHh---CCCeEEEecChHHHHHHHHHHHHHhccC--CC------EEEEeCCCchhHH-HHH
Q 013079 91 FIYSRHFNPTVLNLSRQMAALE---GTEAAYCTASDKAGMSAISSVLMQLCSS--GG------HVVAARTLYGGTH-ALL 158 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~---g~~~~~~tsg~~~gt~ai~~al~~l~~~--gd------~Vi~~~~~y~~~~-~~~ 158 (450)
|..+-+......++++.|.+.. .++.++|++| ||+|+..||+...+. -+ .+|....+||+-. ..+
T Consensus 90 hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~ns---GTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgal 166 (433)
T KOG1401|consen 90 HSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNS---GTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGAL 166 (433)
T ss_pred eccCccccHHHHHHHHHHHhcccCCCccEEEEecC---CcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHH
Confidence 4444433333667788888877 5788999999 999999999754321 12 3888888887733 222
Q ss_pred HH-hCCCccCe-------eEEEeCCCCHHHHHHhhhcC--CceEEEEecCCCCcccccC----HHHHHHHHHhcCCEEEE
Q 013079 159 TH-FFPRACNI-------TTTFVDISDHEMVNSAIVQG--RTKVLYFESISNPTLAVAN----IPELSRLAHDKGVTVVV 224 (450)
Q Consensus 159 ~~-~~~~~~g~-------~v~~v~~~d~~~l~~ai~~~--~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi~liv 224 (450)
.. .... .+. .+......|..++++.++.. +..+|++|..+..-|.++. +..|.++|+++|++||.
T Consensus 167 s~~~~s~-y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~ 245 (433)
T KOG1401|consen 167 SVTGNSK-YGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIF 245 (433)
T ss_pred Hhhcccc-cCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEe
Confidence 20 0010 121 33444455899999988433 3689999999988888753 78999999999999999
Q ss_pred eCCCCCCCCC-------ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh--hhhhccCCCchHHHHHHH
Q 013079 225 DNTFSPLVLS-------PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ--GALMLLGPTMNPKVAFEL 295 (450)
Q Consensus 225 D~~~~~~~~~-------~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~--~~~~~~g~~~~~~~a~~~ 295 (450)
||+++++... ....-.|+.+ +.|.+++ |.++ |+..+++++.+.+..... +..++.|+.+...++...
T Consensus 246 DEV~tG~gR~g~~~a~e~~~~~PDI~t--~aK~L~g-GlPi-gA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~ 321 (433)
T KOG1401|consen 246 DEVQTGLGRLGYGWAQEYFGVTPDITT--VAKPLGG-GLPI-GATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKV 321 (433)
T ss_pred ehhhhCccccchHHHHHHhCcCCccee--ehhhccC-Ccee-EEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHH
Confidence 9999765422 1223467777 9999994 6999 888888888887754322 123355555555555444
Q ss_pred HccCCcHHHHHHHHHHHHHHHHHHHHh
Q 013079 296 SERIPHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 296 ~~~~~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
+..+.. .+..++..+..+.|.+.|.+
T Consensus 322 l~~l~~-~e~~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 322 LDELKD-PETLKNVSKIGKELRKLLDE 347 (433)
T ss_pred HHHHcC-HHHHHHHHHHHHHHHHHHHH
Confidence 433322 22333333333444444443
No 357
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=4e-13 Score=129.61 Aligned_cols=217 Identities=15% Similarity=0.221 Sum_probs=159.8
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCC
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISD 177 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d 177 (450)
.....++++.+|+++|.+++++++- |-..+.+.+.+++.+|.-|+.....|.+...-+ ++.|..++....+|
T Consensus 181 ~~~hkelE~l~A~f~g~e~a~vF~m---Gf~TNs~~~p~l~~~gsLIiSDelNHaSi~~Ga-----RLSgAtiRVfkHNd 252 (519)
T KOG1357|consen 181 TEEHKELEELVARFLGVEDAIVFSM---GFATNSMNIPSLLGKGSLIISDELNHASLITGA-----RLSGATTRVFRHND 252 (519)
T ss_pred HHHHHHHHHHHHHhcCCcceEEEec---cccccccCcceeecCCcceeeccccchheeccc-----cccCceEEEEecCC
Confidence 3567899999999999999888887 778888888889999887777777777655443 35688887778888
Q ss_pred HHHHHHhhhc------CCc------eEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCC---C------C
Q 013079 178 HEMVNSAIVQ------GRT------KVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLV---L------S 234 (450)
Q Consensus 178 ~~~l~~ai~~------~~t------~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~---~------~ 234 (450)
..+||+.+++ ++| .+|+++.....-|.+.++.++.+++|++..+++.||++ +.+. . .
T Consensus 253 m~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g 332 (519)
T KOG1357|consen 253 MQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFG 332 (519)
T ss_pred HHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccC
Confidence 8888887721 222 36777888889999999999999999999999999997 2221 1 1
Q ss_pred ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccC---------CcHHHH
Q 013079 235 PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERI---------PHLGLR 305 (450)
Q Consensus 235 ~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~---------~~l~~~ 305 (450)
+..-.+|+++++++|++|.. ||++.+++++++.++..... ...+..+++..+...+..+ ....++
T Consensus 333 ~d~~dvDImMGtftKSfga~----GGyiagsk~lid~lrt~s~~--~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k 406 (519)
T KOG1357|consen 333 VDPEDVDIMMGTFTKSFGAA----GGYIAGSKELIDYLRTPSPS--ALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQK 406 (519)
T ss_pred CCchhheeecceehhhcccc----cceecCcHHHHhhhccCCCc--eeecccCChHHHHHHHHHHHhhcCCCcccHHHHH
Confidence 22225899999999999965 49999999999887643321 1233334444333322222 224567
Q ss_pred HHHHHHHHHHHHHHHHhCCCeee
Q 013079 306 MKEHCHRALIFARRMKKLGLKVL 328 (450)
Q Consensus 306 ~~~~~~~~~~l~~~L~~~~~~v~ 328 (450)
.++..++..+++..|+..++.+.
T Consensus 407 ~~~l~~ns~yfr~~l~~~gfivy 429 (519)
T KOG1357|consen 407 IERLAENSRYFRWELQKMGFIVY 429 (519)
T ss_pred HHHHHhhhHHHHHhhhcCcEEEe
Confidence 77889999999999988877554
No 358
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.47 E-value=1.4e-11 Score=122.00 Aligned_cols=287 Identities=14% Similarity=0.109 Sum_probs=174.1
Q ss_pred cCCCChhHHHHHHHHHHHhCCC--e--EEEecChHHHHHHHHHHHHHhc-cCCCEEEEeCCCchhHHHHHHHhCCCccCe
Q 013079 94 SRHFNPTVLNLSRQMAALEGTE--A--AYCTASDKAGMSAISSVLMQLC-SSGGHVVAARTLYGGTHALLTHFFPRACNI 168 (450)
Q Consensus 94 ~r~~~~~~~~l~~~iA~l~g~~--~--~~~tsg~~~gt~ai~~al~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~ 168 (450)
+.......+++++.|.++++.+ . .++++| ||.++.+++..++ ++|+++++.. .|+.-.. .+...+ .|+
T Consensus 34 s~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~Gs---GT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~--~eia~~-~g~ 106 (374)
T TIGR01365 34 SKLGKEKLAEAIKKTREMLGVPADYLIGIVPAS---DTGAVEMALWSMLGCRGVDVLAWE-SFGKGWV--TDVTKQ-LKL 106 (374)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCc---hHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHH--HHHHHh-cCC
Confidence 3334566788889999999853 2 466888 9999999999998 5788888764 3433211 022222 566
Q ss_pred -eEEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCC
Q 013079 169 -TTTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGA 240 (450)
Q Consensus 169 -~v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~ 240 (450)
+++.++.. |+++++. . +.|++.+.-..||...|+++|.+.+ ++++++||.+- +...++.. ++
T Consensus 107 ~~v~~l~~~~g~~~~~~~ve~---~---~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--~i 176 (374)
T TIGR01365 107 PDVRVLEAEYGKLPDLKKVDF---K---NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--KL 176 (374)
T ss_pred CCcEEEcCCCCCCCCHHHcCC---C---CCEEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh--HC
Confidence 35555433 6777652 2 1255666666789999997766432 58999999984 43334333 48
Q ss_pred eEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh---------h---------hhh-hccCCCchHHHHHHHHccC--
Q 013079 241 DVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH---------Q---------GAL-MLLGPTMNPKVAFELSERI-- 299 (450)
Q Consensus 241 di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~---------~---------~~~-~~~g~~~~~~~a~~~~~~~-- 299 (450)
|+++.|..|.++++++ + ++++.+++.+++..... . ... ..+..++.....+.+...+
T Consensus 177 Dv~~tgsQK~L~~ppG-l-s~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~ 254 (374)
T TIGR01365 177 DVVTFSWQKVLGGEGA-H-GMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKW 254 (374)
T ss_pred cEEEEechhccCCCCc-e-EEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHH
Confidence 9999999999998764 3 77777877765544210 0 000 1223333333333222222
Q ss_pred ----CcHHHHHHHHHHHHHHHHHHHHhCC-CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHH------H----
Q 013079 300 ----PHLGLRMKEHCHRALIFARRMKKLG-LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEE------K---- 364 (450)
Q Consensus 300 ----~~l~~~~~~~~~~~~~l~~~L~~~~-~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~------~---- 364 (450)
..++.+.+++.++++.+.+.+++++ ..+.... +.. ....++.+.++... +
T Consensus 255 i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~-~~~--------------rS~tvt~v~~~~~~~~~~~~~~~~~ 319 (374)
T TIGR01365 255 AESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAET-PEI--------------RSNTSVCLKVVDPAIDALDEDAQAD 319 (374)
T ss_pred HHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCC-hhh--------------cCCCeEEEEeCCccccccccchhhH
Confidence 2488899999999999999999998 4432210 100 11226667775321 2
Q ss_pred -HHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 365 -ANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 365 -~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
...|.+.+... | +.+..|... ..+..+||.-- -+-..+.++.|..+|+-+
T Consensus 320 ~~~~~~~~l~~~---g-i~i~~G~~~-----------------------~~~~~fRIg~~-G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 320 FAKELISTLEKE---G-VAYDIGSYR-----------------------DAPSGLRIWCG-ATVEKSDLECLCPWLDWA 370 (374)
T ss_pred HHHHHHHHHHHC---C-EEEeccccc-----------------------cCCCceEEecC-CcCCHHHHHHHHHHHHHH
Confidence 46677777642 3 344433211 11367999654 445566677777777644
No 359
>PLN02452 phosphoserine transaminase
Probab=99.47 E-value=9.6e-12 Score=123.14 Aligned_cols=282 Identities=12% Similarity=0.070 Sum_probs=178.3
Q ss_pred ChhHHHHHHHHHHHhCCC---eE-EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 98 NPTVLNLSRQMAALEGTE---AA-YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~---~~-~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
....+++++.|.++++.+ .+ ++..| ||.++.+++..++.+|+++++....+.+-... +...+ .|...+..
T Consensus 51 ~~i~~~~~~~L~~l~~~p~~y~v~~l~Gs---gt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~--~~a~~-~g~~~~~~ 124 (365)
T PLN02452 51 LSIIQKAEADLRELLDIPDNYEVLFLQGG---ASTQFAAIPLNLCKPGDKADFVVTGSWSKKAA--KEAKK-YCKTNVIA 124 (365)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEeCc---cHHHHHHHHHhcCCCCCeEEEEECCHHHHHHH--HHHHH-hCCCcEEE
Confidence 356788999999999863 35 45577 99999999999999999888776665544322 22222 34322222
Q ss_pred ---C-----CCCHHHHHHhhhcCCceEEEEecCCCCccc-ccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeE
Q 013079 174 ---D-----ISDHEMVNSAIVQGRTKVLYFESISNPTLA-VANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADV 242 (450)
Q Consensus 174 ---~-----~~d~~~l~~ai~~~~t~lv~i~~~~NptG~-v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di 242 (450)
+ ..++++++ . .++.+.|++++....||. ..|++++. ++++++|.++ +...++..++++|+
T Consensus 125 ~~~~~~~~~~~~~~~~~--~-~~~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~ 195 (365)
T PLN02452 125 SGKDEKYTKIPSVSEWE--L-TPDAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY 195 (365)
T ss_pred ecCCCCCCCCCChHHcC--C-CCCCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE
Confidence 1 22555542 2 456788888877778898 48887765 3899999997 55566666677655
Q ss_pred EEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhh-----h---ccCCCchHHHHHH---HHccCC---cHHHHHHH
Q 013079 243 VVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGAL-----M---LLGPTMNPKVAFE---LSERIP---HLGLRMKE 308 (450)
Q Consensus 243 ~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~-----~---~~g~~~~~~~a~~---~~~~~~---~l~~~~~~ 308 (450)
.|.+|.+|++| + |+++.++++++++........ . ..-++++....+. ++..+. .++.+.++
T Consensus 196 --~saqK~lGP~G--l-~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r 270 (365)
T PLN02452 196 --AGAQKNVGPSG--V-TIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKR 270 (365)
T ss_pred --EecccccCCCC--e-EEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 59999999988 5 888888887765432111000 0 1112333332222 222221 35667778
Q ss_pred HHHHHHHHHHHHHhC-CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhcccccccccccccc
Q 013079 309 HCHRALIFARRMKKL-GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGY 387 (450)
Q Consensus 309 ~~~~~~~l~~~L~~~-~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~ 387 (450)
++++++++.+.|++. ++ ..+.. .+.+ ....+++|.+++.+...+|++.++..+ +..--|
T Consensus 271 ~~~~a~~l~~~l~~~~G~--y~~~~--~~~~-----------rs~~~vsF~~~~~~~~~~f~~~~~~~g----~~~~~G- 330 (365)
T PLN02452 271 NIRKADLLYDAIDESNGF--YVCPV--EKSV-----------RSLMNVPFTLGGSELEAEFVKEAAKAG----MVQLKG- 330 (365)
T ss_pred HHHHHHHHHHHHHhCCCc--ccCCC--ChHH-----------hCCeEEEEEcCCchhHHHHHHHHHHCC----CcccCC-
Confidence 899999999999875 33 11111 1110 123489999987666788998888633 221111
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 388 YETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 388 ~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
..+ -+-+|+|+= -.-..+.+++|.+.+++..+
T Consensus 331 ---------~r~---------------~gg~R~s~y-na~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 331 ---------HRS---------------VGGMRASIY-NAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred ---------ccc---------------cCceEEECc-CCCCHHHHHHHHHHHHHHHH
Confidence 110 123999976 66778888999998888754
No 360
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.45 E-value=6.3e-12 Score=127.88 Aligned_cols=287 Identities=15% Similarity=0.125 Sum_probs=163.8
Q ss_pred CCChhHHHHHHHHHH----HhC--CCeEEEecChHHHHHHHHHHHHHhcc--------------------------CC--
Q 013079 96 HFNPTVLNLSRQMAA----LEG--TEAAYCTASDKAGMSAISSVLMQLCS--------------------------SG-- 141 (450)
Q Consensus 96 ~~~~~~~~l~~~iA~----l~g--~~~~~~tsg~~~gt~ai~~al~~l~~--------------------------~g-- 141 (450)
..++...++.+.|++ +.. .+.++|++| |+||+..|++.... +|
T Consensus 98 ~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~S---GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~ 174 (464)
T TIGR00699 98 LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMS---GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSP 174 (464)
T ss_pred CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCC---cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCc
Confidence 345556666676644 443 367899999 99999999985521 11
Q ss_pred -CEEEEeCCCchhHHHHHHHhCC----CccCe---eEEEeCC-------------------CCHHHHHHhhhc--CCceE
Q 013079 142 -GHVVAARTLYGGTHALLTHFFP----RACNI---TTTFVDI-------------------SDHEMVNSAIVQ--GRTKV 192 (450)
Q Consensus 142 -d~Vi~~~~~y~~~~~~~~~~~~----~~~g~---~v~~v~~-------------------~d~~~l~~ai~~--~~t~l 192 (450)
.+||.....||+.......... +..+. .+.+++. .+++.+++++.. +++.+
T Consensus 175 r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAA 254 (464)
T TIGR00699 175 DLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAA 254 (464)
T ss_pred CCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEE
Confidence 2699999999886543211100 00010 1111111 135566776632 46899
Q ss_pred EEEecCCCCcccccC----HHHHHHHHHhcCCEEEEeCCCCCCCCCc-------cCCC--CeEEEeCCCCccccCccceE
Q 013079 193 LYFESISNPTLAVAN----IPELSRLAHDKGVTVVVDNTFSPLVLSP-------ARLG--ADVVVHSISKFISGGADIIA 259 (450)
Q Consensus 193 v~i~~~~NptG~v~~----l~~I~~la~~~gi~livD~~~~~~~~~~-------~~~g--~di~~~S~sK~~g~~g~~ig 259 (450)
|++|.+....|.+.+ +++|.++|+++|+++|+||+++++.... ..+. +|+++ ++|.+++.
T Consensus 255 vI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~g----- 327 (464)
T TIGR00699 255 IIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQTA----- 327 (464)
T ss_pred EEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhccC-----
Confidence 999999999999887 9999999999999999999986553211 1222 78877 89999633
Q ss_pred EEEEcCHHHHHHHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCchh
Q 013079 260 GAVCGPANLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYP-GLEDHPHH 338 (450)
Q Consensus 260 G~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p-~~~~~p~~ 338 (450)
|+++.++ .+...... ....+..|+.+...++...+..++. ....++..+..++|.+.|+++..+ +| .+.
T Consensus 328 G~~~~~~-~~~~~~~~-~~~~T~~gnp~~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~--~~~~i~----- 397 (464)
T TIGR00699 328 GYFFHDP-AFRPNKPY-RQFNTWMGDPSRALILREIIQEIKR-KDLLENVAHVGDYLYTGLEDLQKK--YPEFIQ----- 397 (464)
T ss_pred Cccccch-hccCCCCc-ccccCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHh--CCCcee-----
Confidence 3333332 11110000 1112233444333333333322211 112233344445565666543111 11 000
Q ss_pred HHHHHHhccCC--CcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCC
Q 013079 339 ELLKSMANKEY--GFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAG 416 (450)
Q Consensus 339 ~l~~~~~~~~~--g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~ 416 (450)
+.+ |.|.++.+++++...+..+...+.. .|++. .. ...+
T Consensus 398 --------~vRg~G~Glm~gie~~~~~~~~~i~~~~~~---~Gvl~-~~---------------------------~g~~ 438 (464)
T TIGR00699 398 --------NLRGKGRGTFIAWDTPDEAKRDKLLKKARN---NGVNI-GG---------------------------CGVK 438 (464)
T ss_pred --------eecccCeEEEEEEecCCHHHHHHHHHHHHH---CCcEE-ec---------------------------CCCC
Confidence 122 6789999999865556677777664 23221 10 0136
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 417 LVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 417 ~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
.|||+.. ..-+++.++.+.++|++.
T Consensus 439 ~ir~~Pp-l~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 439 AIRLRPM-LVFQKHHADIFLEIISKI 463 (464)
T ss_pred eEEEeCC-CCCCHHHHHHHHHHHHHh
Confidence 7999999 877788888877777653
No 361
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.45 E-value=2.4e-11 Score=113.02 Aligned_cols=284 Identities=17% Similarity=0.203 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCC-chhHHHHHH---HhCCCccCeeEEE
Q 013079 101 VLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTL-YGGTHALLT---HFFPRACNITTTF 172 (450)
Q Consensus 101 ~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~-y~~~~~~~~---~~~~~~~g~~v~~ 172 (450)
-+.+-.++|-++|+. +++++.+ .+--++-++.+.+ .+|+.||++.-. |+.-...+. .... .|.++..
T Consensus 78 p~~lgdklApLiGA~~~Evvv~dt---ts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~--~~~~~~~ 152 (407)
T COG3844 78 PERLGDKLAPLIGARAGEVVVTDT---TSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLG--IGYDLEG 152 (407)
T ss_pred hhHHHHHhhhhhcCCCCceEEeCC---cchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhc--cccccee
Confidence 466788899999974 4677776 5555555555544 348888887643 333222222 2222 1333333
Q ss_pred eCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCc
Q 013079 173 VDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKF 250 (450)
Q Consensus 173 v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~ 250 (450)
.+.+.++++++ ++++.+|++.++|.-||...++.+|.++++++|++++-|-++ +.+..+.-..|+|+-+++.+|+
T Consensus 153 --~~~P~~~~~~~-~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKY 229 (407)
T COG3844 153 --VIAPRALEEAI-TDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKY 229 (407)
T ss_pred --eeChHHHHHhh-ccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeecee
Confidence 34778999999 899999999999999999999999999999999999999998 5555666666999999999999
Q ss_pred cccCccceEEEEEcCHHHHH----HHHHHhh---------------hhhhccCCCchHHHHHHHHccCC-----cHHHHH
Q 013079 251 ISGGADIIAGAVCGPANLVN----SMMDLHQ---------------GALMLLGPTMNPKVAFELSERIP-----HLGLRM 306 (450)
Q Consensus 251 ~g~~g~~igG~l~~~~~~~~----~l~~~~~---------------~~~~~~g~~~~~~~a~~~~~~~~-----~l~~~~ 306 (450)
+++...-++|+.+.++ ..+ ++..+.. +...+..++........+.-.++ .+.+..
T Consensus 230 LNgGPGapa~l~v~~~-h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR 308 (407)
T COG3844 230 LNGGPGAPAGLFVAPR-HRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELR 308 (407)
T ss_pred ccCCCCCceeEEeccc-cccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHH
Confidence 9743333445444432 222 2211100 11111112222222211111221 144444
Q ss_pred HHHHHHHHHHHHHHHhC----CCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccc
Q 013079 307 KEHCHRALIFARRMKKL----GLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMA 382 (450)
Q Consensus 307 ~~~~~~~~~l~~~L~~~----~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~ 382 (450)
++-..+.+++++.++.+ +..+..|.. | .-.|+-+++..+. +.+.+.+|... |+|
T Consensus 309 ~kSlaLTd~fieLvEa~~~~~~l~l~tPr~-----~----------~~rGsqvS~~hp~---~~~V~qaLi~r---GVi- 366 (407)
T COG3844 309 KKSLALTDYFIELVEARCEYYGLTLVTPRA-----H----------EERGSQVSLYHPH---GYQVMQALIDR---GVI- 366 (407)
T ss_pred HhhhHHHHHHHHHHHhccccCCcEEeccch-----h----------hhccceeeEecCc---HHHHHHHHHHc---Ccc-
Confidence 55566778888887765 235555541 1 1368889999985 34555665532 222
Q ss_pred cccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCC----CCHHHHHHHHHHHHHHh
Q 013079 383 VSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYL----GTLDQRWSQFEKALSRM 442 (450)
Q Consensus 383 vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~----~~~~~~i~~l~~al~~~ 442 (450)
|.+ -.++.|||.+..+ .|+-+.++.|.++|+..
T Consensus 367 ---gD~------------------------R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 367 ---GDF------------------------REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred ---ccc------------------------cCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 111 1257799887732 55666667777777654
No 362
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=3.2e-11 Score=114.55 Aligned_cols=203 Identities=18% Similarity=0.220 Sum_probs=135.2
Q ss_pred ccccccCccccCCHHHHHHhhcCCCCCCCCCccccCCCChhHHHHHHHHHHHh----C----CCeEEEecChHHHHHHHH
Q 013079 60 MSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALE----G----TEAAYCTASDKAGMSAIS 131 (450)
Q Consensus 60 ~pi~~att~~~~~~~~~~~~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~----g----~~~~~~tsg~~~gt~ai~ 131 (450)
|-+..+..|+.+..+...+.+...-| .-+.|.-++ .++-+|+.+|+++ | ++.+++|.| ++.|+.
T Consensus 79 p~lLd~~~fp~Dai~RA~~~L~~~gG-s~GaYS~Sq----Gv~~vR~~VA~~I~rRDG~p~~p~dI~LT~G---AS~ai~ 150 (475)
T KOG0258|consen 79 PELLDSPEFPTDAIKRAKRILNDCGG-SLGAYSDSQ----GVPGVRKHVAEFIERRDGIPADPEDIFLTTG---ASPAIR 150 (475)
T ss_pred hhhcCCCCCCHHHHHHHHHHHHhcCC-ccccccccc----CChhHHHHHHHHHHhccCCCCCHHHeeecCC---CcHHHH
Confidence 44555555655556788888877644 233343333 3445566666654 3 245899999 999999
Q ss_pred HHHHHhc-cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE-eCC-----CCHHHHHHhhhc----CCceEEEEecCCC
Q 013079 132 SVLMQLC-SSGGHVVAARTLYGGTHALLTHFFPRACNITTTF-VDI-----SDHEMVNSAIVQ----GRTKVLYFESISN 200 (450)
Q Consensus 132 ~al~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~-v~~-----~d~~~l~~ai~~----~~t~lv~i~~~~N 200 (450)
.++..++ .+.+.|+++-|-|+-|...+..+. +..+.| ++. .|.++|++.+.. -++++++|.+|.|
T Consensus 151 ~il~l~~~~~~~GvliPiPQYPLYsAti~l~~----~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGN 226 (475)
T KOG0258|consen 151 SILSLLIAGKKTGVLIPIPQYPLYSATISLLG----GTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGN 226 (475)
T ss_pred HHHHHHhcCCCCceEeecCCCchhHHHHHHhC----CcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCC
Confidence 9998775 456889999999998888775332 222322 221 278888877621 2678999999999
Q ss_pred Cccccc---CHHHHHHHHHhcCCEEEEeCCCC-CCCCCc----------cCCC---C----eEEEeCCCCccccCccceE
Q 013079 201 PTLAVA---NIPELSRLAHDKGVTVVVDNTFS-PLVLSP----------ARLG---A----DVVVHSISKFISGGADIIA 259 (450)
Q Consensus 201 ptG~v~---~l~~I~~la~~~gi~livD~~~~-~~~~~~----------~~~g---~----di~~~S~sK~~g~~g~~ig 259 (450)
|||.+. .+++|.++|+++++.++.|++|. .+.... .++| . -+..+|.||.+.+....-|
T Consensus 227 PTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RG 306 (475)
T KOG0258|consen 227 PTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRG 306 (475)
T ss_pred ccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccC
Confidence 999995 58999999999999999999982 222110 0111 1 2567889999987655557
Q ss_pred EEE-E-c-CHHHHHHHHH
Q 013079 260 GAV-C-G-PANLVNSMMD 274 (450)
Q Consensus 260 G~l-~-~-~~~~~~~l~~ 274 (450)
|++ + . +++..+.+.+
T Consensus 307 GYmEv~n~~prv~~qi~K 324 (475)
T KOG0258|consen 307 GYMESLNRDPRVKQQIKK 324 (475)
T ss_pred CeeecccCChhHHHHHHH
Confidence 997 2 2 3444444443
No 363
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.40 E-value=2.3e-11 Score=123.75 Aligned_cols=165 Identities=15% Similarity=0.191 Sum_probs=107.3
Q ss_pred hHHHHHHHHHHHhC-CCeEEEecChHHHHHHHHHHHHHhc-cCCC-EEEEe-CCCchhHHHHHHHhCCCccCe------e
Q 013079 100 TVLNLSRQMAALEG-TEAAYCTASDKAGMSAISSVLMQLC-SSGG-HVVAA-RTLYGGTHALLTHFFPRACNI------T 169 (450)
Q Consensus 100 ~~~~l~~~iA~l~g-~~~~~~tsg~~~gt~ai~~al~~l~-~~gd-~Vi~~-~~~y~~~~~~~~~~~~~~~g~------~ 169 (450)
...++.++|+++.. .+.++|++| |+||+..|++... -.|+ +|+.. ...|++.............+. .
T Consensus 89 ~~~~la~~l~~~~p~~~~v~f~~s---GseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~ 165 (431)
T PRK06209 89 IELDAAESFLELIDGADMVKFCKN---GSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSAL 165 (431)
T ss_pred HHHHHHHHHHHhCCccceEEEecC---HHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcc
Confidence 33467888888774 468899999 9999999998542 2343 55554 344443211110000000111 1
Q ss_pred EEEeCCCCHHHHHHhhhc--CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCc------cCCCCe
Q 013079 170 TTFVDISDHEMVNSAIVQ--GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSP------ARLGAD 241 (450)
Q Consensus 170 v~~v~~~d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~------~~~g~d 241 (450)
+..++..|++++++++.. +++.+|++|++....+....+++|.++|++||+++|+||+++++.... ..+.+|
T Consensus 166 ~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PD 245 (431)
T PRK06209 166 TVTFRYNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPD 245 (431)
T ss_pred ccccCCCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcc
Confidence 233445689999988832 357789999876553333459999999999999999999985553321 122467
Q ss_pred EEEeCCCCccccCccceEEEEEcCHHHHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGPANLVNS 271 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~ 271 (450)
+++ ++|.+|+ |.++ |++++++++++.
T Consensus 246 i~t--~gK~lgg-G~p~-~av~~~~~i~~~ 271 (431)
T PRK06209 246 LSC--FGKALGN-GFAV-SALAGKREYMEL 271 (431)
T ss_pred eee--ehhhhcC-Cccc-EEEEEHHHHHhh
Confidence 755 8999995 5666 888888887765
No 364
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.36 E-value=2.2e-10 Score=123.51 Aligned_cols=276 Identities=14% Similarity=0.153 Sum_probs=182.0
Q ss_pred hhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhc---cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 99 PTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLC---SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~---~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
+.+-+++..|+++.|.+ ++-+..+ +|++.++++++.- +++++|++++..|+.+...++..... .|++++.+
T Consensus 109 e~l~e~Qt~i~eLtGm~~aNaSl~d~---atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~-~g~~v~~~ 184 (939)
T TIGR00461 109 EALLNFQTVVSDLTGLPVANASLLDE---GTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKP-FGIEVIVV 184 (939)
T ss_pred HHHHHHHHHHHHHHCCChhhhhccch---hhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHh-cCcEEEEE
Confidence 45567889999999976 4577778 7777776666532 22478999999999999888655544 79998887
Q ss_pred CCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCcc
Q 013079 174 DISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKFI 251 (450)
Q Consensus 174 ~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~~ 251 (450)
+ +++|++.+ ++.+|++++|| -.|.+.|+++|++++|++|.+++++.-. ..+..+|-++|+|+++++..++.
T Consensus 185 ~---~~~l~~~~---~~~~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg 257 (939)
T TIGR00461 185 D---CSDIKKAV---DVFGCLLQYPA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFG 257 (939)
T ss_pred c---HHHHhhcC---CEEEEEEECCC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccC
Confidence 4 55666554 57788888885 5899999999999999999999997655 44456888999999988766653
Q ss_pred c-----cCccceEEEEEcCHHHHHHHHHH--------------------hhhhhhc-cCC----CchHHHH-----HHHH
Q 013079 252 S-----GGADIIAGAVCGPANLVNSMMDL--------------------HQGALML-LGP----TMNPKVA-----FELS 296 (450)
Q Consensus 252 g-----~~g~~igG~l~~~~~~~~~l~~~--------------------~~~~~~~-~g~----~~~~~~a-----~~~~ 296 (450)
- ||+ +|++..++++...+-.. |.+..++ -+. +.....| ++..
T Consensus 258 ~p~g~GGP~---aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~ 334 (939)
T TIGR00461 258 VPMGYGGPH---AAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVY 334 (939)
T ss_pred CCCCCCCCc---eeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHH
Confidence 3 444 58988887766544110 0000001 111 1111111 1222
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccc
Q 013079 297 ERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYA 376 (450)
Q Consensus 297 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~ 376 (450)
.+-+.+.+..++...++.++.+.|.+.|.++..+. +=..+.+.++.. .++++.+.+...
T Consensus 335 ~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~-------------------fF~~~~v~~~~~-~~~~i~~~~~~~- 393 (939)
T TIGR00461 335 HGPKGLKNIARRIHSLTSILANGLENDPHELINKT-------------------WFDTLTVKVGNG-ISSELLKAAEEF- 393 (939)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-------------------ccceEEEEeCCC-CHHHHHHHHHHC-
Confidence 23344555555667788899999988777654332 111455666422 245666666542
Q ss_pred cccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 013079 377 QFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALS 440 (450)
Q Consensus 377 ~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~ 440 (450)
| |-++. ..++.|++|+. ..+++++++.|.+++.
T Consensus 394 --g-i~l~~---------------------------~~~~~i~~s~~-E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 394 --N-INLRA---------------------------VDTTTVGIALD-ETTTKADVENLLKVFD 426 (939)
T ss_pred --C-Ceeee---------------------------cCCCEEEEEee-cCCCHHHHHHHHHHhc
Confidence 1 22110 11467999999 9889999999999885
No 365
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.35 E-value=5.3e-10 Score=109.80 Aligned_cols=283 Identities=11% Similarity=0.018 Sum_probs=172.0
Q ss_pred ChhHHHHHHHHHHHhCCC---eE-EEecChHHHHHHHHHHHHHhccCCCEEE-EeCCCchhHHHHHHHhCCCccCeeEEE
Q 013079 98 NPTVLNLSRQMAALEGTE---AA-YCTASDKAGMSAISSVLMQLCSSGGHVV-AARTLYGGTHALLTHFFPRACNITTTF 172 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~---~~-~~tsg~~~gt~ai~~al~~l~~~gd~Vi-~~~~~y~~~~~~~~~~~~~~~g~~v~~ 172 (450)
....+++++.|.++++.+ .+ ++.+| ||.+..+++..++.+||+++ +....+.+-... ....+ .| ++..
T Consensus 48 ~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~Gg---gT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~--~ea~~-~g-~v~~ 120 (364)
T PRK12462 48 SSLLAQAEADLRDLLGIPDEYGVVFLQGG---SSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAI--GEASR-VA-AMRV 120 (364)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEEecc---HHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHH--HHHHh-cC-CceE
Confidence 355688888999999862 34 55667 99999999999999998655 444444443322 22222 34 2332
Q ss_pred eC---------CCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCe
Q 013079 173 VD---------ISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGAD 241 (450)
Q Consensus 173 v~---------~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~d 241 (450)
+. ..+++++. + .++.+.|++++-...+|...| ++.+.+++++|+|.+- +...++..+ .|
T Consensus 121 ~~~~~~~~~~~~p~~~~~~--~-~~d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~--~d 190 (364)
T PRK12462 121 VWDGAASGYRTLPSLAELD--W-DARAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEA--YG 190 (364)
T ss_pred ecCcCCCCCCcCCCHHHhc--c-CCCCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHH--cc
Confidence 22 12455542 3 456788888776667788775 3333468999999984 222333333 49
Q ss_pred EEEeCCCCccccCccceEEEEEcCHHHHHHHHHH-------hhhh-hhccCCCchHHHHHHHHccC-----C--cHHHHH
Q 013079 242 VVVHSISKFISGGADIIAGAVCGPANLVNSMMDL-------HQGA-LMLLGPTMNPKVAFELSERI-----P--HLGLRM 306 (450)
Q Consensus 242 i~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~-------~~~~-~~~~g~~~~~~~a~~~~~~~-----~--~l~~~~ 306 (450)
++..+..|.+|++| + ++++.+++.+++.... +... .....++++....+.+...+ + -++.+.
T Consensus 191 vi~agsQKnlgP~G--l-tvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~ 267 (364)
T PRK12462 191 MVYAHAQKNLGPAG--V-TVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMR 267 (364)
T ss_pred EEEeeccccCCCCc--e-EEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 99999999999888 4 6777787776554221 1100 00122344433333322222 2 456677
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccc
Q 013079 307 KEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLG 386 (450)
Q Consensus 307 ~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G 386 (450)
+++++.++.+.+.+.+.+.-...+..+ .. ..-..+.|.+++.+...+|+...+.. |++. +-
T Consensus 268 ~r~~~ka~~ly~~id~~~~~~~~~~~~---~~-----------RS~mnv~f~~~~~~l~~~f~~~a~~~---gl~~--lk 328 (364)
T PRK12462 268 DINARKAAMLYATLDALNEVIDCHAHR---AA-----------RSTMNVAFRFRQPRLDTLFKEQSTEA---GFCG--LS 328 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCCCh---hh-----------cCcceEEEEcCCHHHHHHHHHHHHHC---CCcc--cc
Confidence 888899999999998875211111111 10 01125788888777778898888753 3211 11
Q ss_pred cccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 387 YYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 387 ~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
+.. +-+.+|+|+= -.-+.+.+++|.+-+++..+
T Consensus 329 Ghr------------------------~vgg~Ras~y-na~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 329 GHR------------------------SIGGIRASLY-NAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred CCc------------------------ccCceEEEcC-CCCCHHHHHHHHHHHHHHHH
Confidence 111 1255999987 77778888888888877654
No 366
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.34 E-value=7e-10 Score=116.77 Aligned_cols=145 Identities=13% Similarity=0.129 Sum_probs=115.0
Q ss_pred ChhHHHHHHHHHHHhCCCeE-EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 98 NPTVLNLSRQMAALEGTEAA-YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~-~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
.-...++++..|+++|++.. ++|+| .|.+|.+++.+++.+||.|++.+.+|.++...+. +.|..++|+.+.
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNG---TS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLi-----lsga~PVYl~P~ 265 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNG---TSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMM-----MSDVTPIYFRPT 265 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCc---hHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH-----HcCCeEEEeccc
Confidence 34678999999999999987 55677 7888999999999999999999999999988764 478888887643
Q ss_pred ---------------CHHHHHHhhhc-CCce---EEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCCc-
Q 013079 177 ---------------DHEMVNSAIVQ-GRTK---VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLSP- 235 (450)
Q Consensus 177 ---------------d~~~l~~ai~~-~~t~---lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~~- 235 (450)
+.+.++++++. ++.+ .++|++| +--|.+.++++|+++|+.++ +++|++| +++.+.+
T Consensus 266 rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 266 RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred ccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 37888888832 2333 6888777 45799999999999999887 6899998 4443332
Q ss_pred ------cCCCC---e--EEEeCCCCcccc
Q 013079 236 ------ARLGA---D--VVVHSISKFISG 253 (450)
Q Consensus 236 ------~~~g~---d--i~~~S~sK~~g~ 253 (450)
...|+ | +++.|.||.+++
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL~a 371 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAA 371 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhcccc
Confidence 22355 4 999999999974
No 367
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.33 E-value=1e-09 Score=115.42 Aligned_cols=151 Identities=13% Similarity=0.103 Sum_probs=116.5
Q ss_pred ChhHHHHHHHHHHHhCCCeE-EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 98 NPTVLNLSRQMAALEGTEAA-YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~-~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
.-...++++..|+++|++.. ++++| .|.+|.+++.+++.+||.|++.+.+|.++...+. +.|..++|+.+.
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNG---TS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLi-----lsga~PVYl~P~ 265 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNG---TSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLM-----MSDVVPIWLKPT 265 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCC---hHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH-----HcCCeeEEeccc
Confidence 34678999999999999987 55677 7889999999999999999999999999988764 478888887643
Q ss_pred ----------C-----HHHHHHhhhc-CC---ceEEEEecCCCCcccccCHHHHHHHHHhcCCEE-EEeCCC-CCCCCCc
Q 013079 177 ----------D-----HEMVNSAIVQ-GR---TKVLYFESISNPTLAVANIPELSRLAHDKGVTV-VVDNTF-SPLVLSP 235 (450)
Q Consensus 177 ----------d-----~~~l~~ai~~-~~---t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~l-ivD~~~-~~~~~~~ 235 (450)
+ .+.++++++. ++ +++++|++| +--|.+.++++|+++| |+.+ ++|++| +++.+.+
T Consensus 266 ~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 266 RNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred ccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 3 3888888832 22 257888887 4579999999999999 6766 699998 4444333
Q ss_pred -------cCC--CCeEE---EeCCCCccccCccceEEEE
Q 013079 236 -------ARL--GADVV---VHSISKFISGGADIIAGAV 262 (450)
Q Consensus 236 -------~~~--g~di~---~~S~sK~~g~~g~~igG~l 262 (450)
... ++|.+ +.|.||.+++-. -+.++
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alT--QaS~i 378 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFS--QASLI 378 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhccccccc--hheee
Confidence 112 46777 999999997533 44666
No 368
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.32 E-value=8.3e-10 Score=105.82 Aligned_cols=282 Identities=15% Similarity=0.128 Sum_probs=147.1
Q ss_pred ChhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHH----Hh----cc---C-----CCEEEEeCCCchhHHHHHH
Q 013079 98 NPTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLM----QL----CS---S-----GGHVVAARTLYGGTHALLT 159 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~----~l----~~---~-----gd~Vi~~~~~y~~~~~~~~ 159 (450)
-..+.++|+.+|+++|.+ ++++..+ +++++... ++ .. | .-+.+++.|.|.-....++
T Consensus 68 l~Gipe~r~l~a~llgv~~~~viv~gN-----SSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E 142 (425)
T PF12897_consen 68 LDGIPEARELFAELLGVPPENVIVGGN-----SSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITE 142 (425)
T ss_dssp SS--HHHHHHHHHHHTS-GGGEEE-SS------HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHH
T ss_pred cCChHHHHHHHHHHhCCCHHHEEEecc-----chHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHH
Confidence 446788999999999964 5555544 33333222 11 11 1 1268999999998888776
Q ss_pred HhCCCccCeeEEEeCCC----CHHHHHHhhh-cCCceEEEEe-cCCCCcccccCHHHHHHHH----HhcCCEEEEeCCC-
Q 013079 160 HFFPRACNITTTFVDIS----DHEMVNSAIV-QGRTKVLYFE-SISNPTLAVANIPELSRLA----HDKGVTVVVDNTF- 228 (450)
Q Consensus 160 ~~~~~~~g~~v~~v~~~----d~~~l~~ai~-~~~t~lv~i~-~~~NptG~v~~l~~I~~la----~~~gi~livD~~~- 228 (450)
.+|++...|+.. |.|.+++.+. ++..|.+++- .-+||||.+..=+-+.+++ ...+..++-|++|
T Consensus 143 -----~~Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~ 217 (425)
T PF12897_consen 143 -----HFGIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYA 217 (425)
T ss_dssp -----HCT-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTT
T ss_pred -----hhCcEEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCce
Confidence 379888888754 9999999883 4567777764 5689999998766555555 3469999999998
Q ss_pred -CCCCCC-c----cCC----------CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccCCCchHHHH
Q 013079 229 -SPLVLS-P----ARL----------GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLGPTMNPKVA 292 (450)
Q Consensus 229 -~~~~~~-~----~~~----------g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g~~~~~~~a 292 (450)
-++..+ + ..+ +..++..|.||+-- +|..| +++.+++..++.+.+... ..+....-++|..-
T Consensus 218 vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf-~GaGv-a~~aaS~~Nl~~~~~~~~-~~tIgpdKvNQLRH 294 (425)
T PF12897_consen 218 VHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITF-PGAGV-AFFAASEANLAWIKKHLS-VQTIGPDKVNQLRH 294 (425)
T ss_dssp T-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS--EEEEE-HHHHHHHHHHHH-HH-S---HHHHHHH
T ss_pred EeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccccc-CCcce-eeeecCHHHHHHHHHHhc-CceeCccHHHHHHH
Confidence 333211 1 111 46799999999866 44447 888888877777665433 11122233555544
Q ss_pred HHHHccCC-cHHHHHHHH----HHHHHHHHHHHHh-----CCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC
Q 013079 293 FELSERIP-HLGLRMKEH----CHRALIFARRMKK-----LGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET 361 (450)
Q Consensus 293 ~~~~~~~~-~l~~~~~~~----~~~~~~l~~~L~~-----~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~ 361 (450)
...+...+ .+...++++ +-+.+.+.+.|.+ .+. .+..|. .|.+++|+...
T Consensus 295 vrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~-------------------GGYFIsld~~~ 355 (425)
T PF12897_consen 295 VRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK-------------------GGYFISLDVLD 355 (425)
T ss_dssp HHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S-------------------BSS-EEEEEST
T ss_pred HHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC-------------------CceEEEEecCC
Confidence 44444544 455555554 2333344444432 233 455554 68899999875
Q ss_pred HHHHHHHHHHhhccccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHH
Q 013079 362 EEKANRLMNYLQNYAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQ 434 (450)
Q Consensus 362 ~~~~~~~~~~l~~~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~ 434 (450)
. .+.+.++..+. .|+.-...|.+.-... .-.+..|||... ....+++-.+
T Consensus 356 G-~AkrvV~lake---AGV~LT~AGAtfPyg~------------------DP~D~nIRiAPS-~P~leel~~A 405 (425)
T PF12897_consen 356 G-TAKRVVELAKE---AGVALTPAGATFPYGK------------------DPRDSNIRIAPS-YPSLEELETA 405 (425)
T ss_dssp T--HHHHHHHHHH---TTEE---TTTTSGGG--------------------TTS-EEEE--S-SS-HHHHHHH
T ss_pred C-hHHHHHHHHHH---hCceeCCCCCCCCCCC------------------CCCCCcEEecCC-CCCHHHHHHH
Confidence 4 26667766664 2322222232211110 112567999999 7666665443
No 369
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.31 E-value=1.6e-09 Score=104.82 Aligned_cols=282 Identities=17% Similarity=0.189 Sum_probs=182.1
Q ss_pred hHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhc--c-CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC
Q 013079 100 TVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLC--S-SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD 174 (450)
Q Consensus 100 ~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~--~-~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~ 174 (450)
.+-+++..++++.|-+ ++-+.-+ +|++-++++++.- + +.++++++...|+.+...++..... .|+++..++
T Consensus 121 aLfefQtlv~dLTGm~VANASm~De---aTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~-~g~~i~~~~ 196 (450)
T COG0403 121 ALFEFQTLVADLTGLDVANASMLDE---ATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEG-LGIEIEVVD 196 (450)
T ss_pred HHHHHHHHHHHHhCCCcccchhhhh---HHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhccc-CceEEEEec
Confidence 3457788899999864 3455556 6776666665542 2 2478999999999999999766554 799999999
Q ss_pred CCCHHHHHHhhhcCCceEEEEecCCCCcc-cccCHHHHHHHHHhcCCEEEEeC--CCCCCCCCccCCCCeEEEeCCCCc-
Q 013079 175 ISDHEMVNSAIVQGRTKVLYFESISNPTL-AVANIPELSRLAHDKGVTVVVDN--TFSPLVLSPARLGADVVVHSISKF- 250 (450)
Q Consensus 175 ~~d~~~l~~ai~~~~t~lv~i~~~~NptG-~v~~l~~I~~la~~~gi~livD~--~~~~~~~~~~~~g~di~~~S~sK~- 250 (450)
.+|+++++++ ...++..|++++|+ -.| .+.++.+|.+.+|++|.++++=. .--.+...|-++|+|++++|..-+
T Consensus 197 ~~d~~~l~~~-~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfG 274 (450)
T COG0403 197 ADDLDDLESA-DDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFG 274 (450)
T ss_pred cchhhhhhhc-cccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccC
Confidence 9999999887 36689999999997 466 66789999999999998877632 223445578889999999999876
Q ss_pred ----cccCccceEEEEEcCHHHHHHH-------------------------HHHhhhhhhccCCCchHH-----HHHHHH
Q 013079 251 ----ISGGADIIAGAVCGPANLVNSM-------------------------MDLHQGALMLLGPTMNPK-----VAFELS 296 (450)
Q Consensus 251 ----~g~~g~~igG~l~~~~~~~~~l-------------------------~~~~~~~~~~~g~~~~~~-----~a~~~~ 296 (450)
||||. +|++..++++..++ ...|+.-.+++-++.... ..++..
T Consensus 275 vPmgfGGPh---ag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~ 351 (450)
T COG0403 275 VPMGFGGPH---AGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVY 351 (450)
T ss_pred CCcCCCCcc---eeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHH
Confidence 44443 48887777665433 001111111111111111 112233
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHhCC--CeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 297 ERIPHLGLRMKEHCHRALIFARRMKKLG--LKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 297 ~~~~~l~~~~~~~~~~~~~l~~~L~~~~--~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
.+.+-+.+..++..+...+++++|++.+ .++..... ++ .+.++++. +....++.+...
T Consensus 352 hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~f------------Fd-------t~~v~~~~-~~~~~l~~~~~~ 411 (450)
T COG0403 352 HGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHF------------FD-------TFTVRVPE-EVAEALLAAAIA 411 (450)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccc------------ee-------eEEEecch-hHHHHHHHHHHh
Confidence 3444566666677888899999999665 44432210 00 45566653 335566655443
Q ss_pred cccccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 375 YAQFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 375 ~~~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
-++.++ .++.+.+=||+- ..++++.++.|.+++...
T Consensus 412 ------~G~~L~-------------------------~~~~~~~~ia~t-Et~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 412 ------GGINLR-------------------------RVDADTVLIALT-ETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ------cCCcee-------------------------eecCCceEEEee-cccCHHHHHHHHHHHhhh
Confidence 122332 112345666777 667788899998887654
No 370
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.27 E-value=9.2e-10 Score=109.34 Aligned_cols=214 Identities=18% Similarity=0.176 Sum_probs=131.0
Q ss_pred hhHHHHHHHHHHHhCCCeE--EEecChHHHHHHHHHHHHHh---ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 99 PTVLNLSRQMAALEGTEAA--YCTASDKAGMSAISSVLMQL---CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~~~--~~tsg~~~gt~ai~~al~~l---~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
+.+-+++..|+++.|-+-+ -+..+ ++++-.+++.+. -+.+++|+++...|+.+...++.+... .|++++.+
T Consensus 110 q~lfe~Qs~i~eLTGmdvaNaSlyd~---atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~-~g~~iv~~ 185 (429)
T PF02347_consen 110 QALFEYQSMICELTGMDVANASLYDG---ATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAP-LGIEIVEV 185 (429)
T ss_dssp HHHHHHHHHHHHHHTSSEE-SEBSSC---CHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCH-CCEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCccCCCCCCh---hHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhh-CCeEEEEe
Confidence 4457899999999998754 45556 444444443332 233469999999999999888766654 79999888
Q ss_pred CCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC---CCCCCCccCCCCeEEEeCCCCc
Q 013079 174 DISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF---SPLVLSPARLGADVVVHSISKF 250 (450)
Q Consensus 174 ~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~---~~~~~~~~~~g~di~~~S~sK~ 250 (450)
+.++-.. ...+++.+|++++|| -.|.+.++++|.+++|++|.++++ .+- -....+|.++|+|+++++ +|.
T Consensus 186 ~~~~~~~----~d~~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~ 258 (429)
T PF02347_consen 186 PLDEDGT----TDDDDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQT 258 (429)
T ss_dssp -BBTTCS----B-STTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTT
T ss_pred cccccCC----ccccCeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCC
Confidence 7542111 105789999999997 479999999999999999999987 543 223457888999999877 887
Q ss_pred cccC---ccceEEEEEcCHHHHHHHHHH-------------------------hhhh-hhccCCC--chH--HHHHHHHc
Q 013079 251 ISGG---ADIIAGAVCGPANLVNSMMDL-------------------------HQGA-LMLLGPT--MNP--KVAFELSE 297 (450)
Q Consensus 251 ~g~~---g~~igG~l~~~~~~~~~l~~~-------------------------~~~~-~~~~g~~--~~~--~~a~~~~~ 297 (450)
||.| |++-.|++..++++...+-.. ++.- ..+.++. +.. ..+++...
T Consensus 259 fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~ 338 (429)
T PF02347_consen 259 FGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYL 338 (429)
T ss_dssp TT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHH
T ss_pred CcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHh
Confidence 7643 333348888887766544110 1100 0011111 111 12333444
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHhC
Q 013079 298 RIPHLGLRMKEHCHRALIFARRMKKL 323 (450)
Q Consensus 298 ~~~~l~~~~~~~~~~~~~l~~~L~~~ 323 (450)
+.+-+.+..++...++.++.+.|.+.
T Consensus 339 G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 339 GPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55667777777888999999999886
No 371
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.24 E-value=1.1e-11 Score=119.24 Aligned_cols=164 Identities=24% Similarity=0.303 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCC---CchhHHHHHHHhCCCccCeeEEEeCCC--
Q 013079 102 LNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAART---LYGGTHALLTHFFPRACNITTTFVDIS-- 176 (450)
Q Consensus 102 ~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~---~y~~~~~~~~~~~~~~~g~~v~~v~~~-- 176 (450)
..+++.++.+.|++.++++++ ...|+.+++..++ +|.+||++.- ++++....- +.... .|.+.+.|-..
T Consensus 50 ~~v~~ll~~ltgAeaA~VvNn---naAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip-~vm~~-sGa~lvEVGttN~ 123 (367)
T PF03841_consen 50 AHVEELLCELTGAEAALVVNN---NAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIP-DVMRQ-SGARLVEVGTTNR 123 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccc---ccccccccccccc-cccccccccccccccccccccc-ccccc-ccccccccccccc
Confidence 456778899999999999999 9999998888775 4678888874 445433221 33333 57666665443
Q ss_pred -CHHHHHHhhhcCCceEEEEecCCCCc--ccc--cCHHHHHHHHHhcCCEEEEeCCCCC------C-------CCCccCC
Q 013079 177 -DHEMVNSAIVQGRTKVLYFESISNPT--LAV--ANIPELSRLAHDKGVTVVVDNTFSP------L-------VLSPARL 238 (450)
Q Consensus 177 -d~~~l~~ai~~~~t~lv~i~~~~Npt--G~v--~~l~~I~~la~~~gi~livD~~~~~------~-------~~~~~~~ 238 (450)
.+++.+++| +++|.+++--+++|-. |.. .+++++++++++|++++++|..-+. + .....+.
T Consensus 124 t~~~Dye~AI-~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~ 202 (367)
T PF03841_consen 124 THLSDYEKAI-TENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAA 202 (367)
T ss_dssp --------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCC
T ss_pred cccccccccc-cccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhc
Confidence 578899999 9999988776766653 323 5899999999999999999976411 1 1233456
Q ss_pred CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHH
Q 013079 239 GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDL 275 (450)
Q Consensus 239 g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~ 275 (450)
|+|++++|.-|.+|+|- +|+++++++++++++..
T Consensus 203 GaDlV~fSGdKlLGGPQ---aGiI~Gkk~lI~~lk~~ 236 (367)
T PF03841_consen 203 GADLVTFSGDKLLGGPQ---AGIIVGKKELIEKLKKH 236 (367)
T ss_dssp T-SEEEEETTSSSSS-S----EEEEEEHHHHHHHHHH
T ss_pred CCCEEEEECCCcCCCCC---eEEEEeCHHHHHHHhhC
Confidence 99999999999999886 59999999999988653
No 372
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.23 E-value=9e-10 Score=106.91 Aligned_cols=160 Identities=26% Similarity=0.280 Sum_probs=117.1
Q ss_pred HHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeC-----CCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 102 LNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAAR-----TLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 102 ~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~-----~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
..+.+..+.+.+++.+++++. .+.|+.+++.++.. +.+|+++. +.++.+...+. ..|.++..+...
T Consensus 71 ~~~~~~~~~~~~aea~~ivnn---n~aAVll~~~al~~-~~EvVis~g~lV~gg~~~v~d~~~-----~aG~~l~EvG~t 141 (395)
T COG1921 71 TELAELLCGLTGAEAAAIVNN---NAAAVLLTLNALAE-GKEVVVSRGELVEGGAFRVPDIIR-----LAGAKLVEVGTT 141 (395)
T ss_pred HHHHHHHhcccchhheeeECC---cHHHHHHHHhhhcc-CCeEEEEccccccCCCCChhHHHH-----HcCCEEEEeccc
Confidence 355556666667888999999 89999988888766 45565544 24455555554 367777766543
Q ss_pred ---CHHHHHHhhhcCCceEEEEecCCCCcccc--cCHHHHHHHHHhcCCEEEEeCCCCCC-----C-CCccCCCCeEEEe
Q 013079 177 ---DHEMVNSAIVQGRTKVLYFESISNPTLAV--ANIPELSRLAHDKGVTVVVDNTFSPL-----V-LSPARLGADVVVH 245 (450)
Q Consensus 177 ---d~~~l~~ai~~~~t~lv~i~~~~NptG~v--~~l~~I~~la~~~gi~livD~~~~~~-----~-~~~~~~g~di~~~ 245 (450)
...+++.+| .++|++++=-+-+|- |.. .++++++++||++|+++++|.+-+.. . ......|+|+|++
T Consensus 142 n~t~~~d~~~AI-ne~ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~ 219 (395)
T COG1921 142 NRTHLKDYELAI-NENTALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSF 219 (395)
T ss_pred CcCCHHHHHHHh-ccCCeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEE
Confidence 788999999 888887554333332 333 57888999999999999999986332 1 1234559999999
Q ss_pred CCCCccccCccceEEEEEcCHHHHHHHHHH
Q 013079 246 SISKFISGGADIIAGAVCGPANLVNSMMDL 275 (450)
Q Consensus 246 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~ 275 (450)
|..|.+++|- +|++++++++++.++..
T Consensus 220 SgdKllgGPq---aGii~GkKelI~~lq~~ 246 (395)
T COG1921 220 SGDKLLGGPQ---AGIIVGKKELIEKLQSH 246 (395)
T ss_pred ecchhcCCCc---cceEechHHHHHHHHhh
Confidence 9999999885 69999999999888654
No 373
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=6.3e-10 Score=105.96 Aligned_cols=153 Identities=20% Similarity=0.308 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHH
Q 013079 101 VLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEM 180 (450)
Q Consensus 101 ~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~ 180 (450)
.-.+++.||+++|++..++.+- |-.+++.++.++++.||.|++......+....++ +.--.+.+...+|.++
T Consensus 141 HldlE~~iakF~G~E~aivYs~---gF~ti~S~ipafsKrGDIi~~de~~nfaIq~Glq-----lSRS~i~~Fkhndm~~ 212 (467)
T KOG1358|consen 141 HLDLEKRIAKFMGTEDAIVYSY---GFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQ-----LSRSTISYFKHNDMED 212 (467)
T ss_pred ecccHHHHHHhhCCcceeeecc---ccchhhhcchhhhccCcEEEEehhhhHHHHHHHh-----hhhheeEEecCCCHHH
Confidence 4579999999999999999999 9999999999999999999888877776666554 1233567777889999
Q ss_pred HHHhhhcCCc-------------eEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCC---------Ccc
Q 013079 181 VNSAIVQGRT-------------KVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVL---------SPA 236 (450)
Q Consensus 181 l~~ai~~~~t-------------~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~---------~~~ 236 (450)
+++.+ .+++ +.|+++...-++|.+.|+.+|.++..++...+++|+.+ +-+.. ...
T Consensus 213 lerll-~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~ 291 (467)
T KOG1358|consen 213 LERLL-PEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVP 291 (467)
T ss_pred HHHhc-cCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCC
Confidence 98876 3322 46778888889999999999999999999999999997 22221 111
Q ss_pred CCCCeEEEeCCCCccccCccceEEEEEcCH
Q 013079 237 RLGADVVVHSISKFISGGADIIAGAVCGPA 266 (450)
Q Consensus 237 ~~g~di~~~S~sK~~g~~g~~igG~l~~~~ 266 (450)
.-.+|++++|+.-.++.. ||+.+++.
T Consensus 292 ~~~iDiv~~sm~~alas~----GgFc~G~~ 317 (467)
T KOG1358|consen 292 ITDIDIVTASMETALASG----GGFCAGKS 317 (467)
T ss_pred ccceeeeeeccccccccc----Cceeecce
Confidence 114799999999999865 47877754
No 374
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.18 E-value=4e-09 Score=110.13 Aligned_cols=225 Identities=17% Similarity=0.114 Sum_probs=144.8
Q ss_pred ccccCCCChhHHHHHHHHHHHhCCCe--EEEecChHHHHHHHHHHHHHhcc---------C-------------------
Q 013079 91 FIYSRHFNPTVLNLSRQMAALEGTEA--AYCTASDKAGMSAISSVLMQLCS---------S------------------- 140 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l~g~~~--~~~tsg~~~gt~ai~~al~~l~~---------~------------------- 140 (450)
+..+..+...-+++-+.+++++|-+. -+||+| ||+||..++..... .
T Consensus 115 ~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsG---GT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~ 191 (608)
T TIGR03811 115 YESSPATSQMEEEVGKEFATLMGYKNGWGHIVAD---GSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPT 191 (608)
T ss_pred cccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCC---hHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccc
Confidence 33444334444667778888888643 589999 99999987754311 0
Q ss_pred ------------------------C------CEEEEeCCCchhHHHHHHHhCCCccCe---eEEEeCCC-----CHHHHH
Q 013079 141 ------------------------G------GHVVAARTLYGGTHALLTHFFPRACNI---TTTFVDIS-----DHEMVN 182 (450)
Q Consensus 141 ------------------------g------d~Vi~~~~~y~~~~~~~~~~~~~~~g~---~v~~v~~~-----d~~~l~ 182 (450)
| ..++++...|.++...+. ++|+ .++.|+++ |+++|+
T Consensus 192 ~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~-----ilGlG~~~vv~VpvD~~~rmd~~~L~ 266 (608)
T TIGR03811 192 KEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAAD-----IIGIGLDQVIPVPVDSNYRMDINELE 266 (608)
T ss_pred ccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHH-----HcCCCcccEEEeecCCCCcCCHHHHH
Confidence 0 057788888999988875 3444 35666654 899998
Q ss_pred Hhhhc---C--CceEEEEecCCCCcccccCHHHHHHHH---HhcCC--EEEEeCCCCCCC----CC------cc------
Q 013079 183 SAIVQ---G--RTKVLYFESISNPTLAVANIPELSRLA---HDKGV--TVVVDNTFSPLV----LS------PA------ 236 (450)
Q Consensus 183 ~ai~~---~--~t~lv~i~~~~NptG~v~~l~~I~~la---~~~gi--~livD~~~~~~~----~~------~~------ 236 (450)
++|++ . .+-+|+....+..+|.+-|+++|+++| +++|+ ++|||++|+++. .+ |.
T Consensus 267 ~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~ 346 (608)
T TIGR03811 267 KIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEV 346 (608)
T ss_pred HHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcc
Confidence 88832 1 234455566788999999999999999 66887 699999996532 11 00
Q ss_pred -----------------------CC-CCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh-----hh--------
Q 013079 237 -----------------------RL-GADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ-----GA-------- 279 (450)
Q Consensus 237 -----------------------~~-g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~-----~~-------- 279 (450)
.+ .+|-++...||++..|-. .|++++.++.+.+.+..... +.
T Consensus 347 ~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~-~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~ 425 (608)
T TIGR03811 347 HAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYS-AGGIVIQDIRMRDVISYFATYVFEKGADIPALLGA 425 (608)
T ss_pred cccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCC-eEEEEEeCHHHHHHHhcCcchhccccccCcccccc
Confidence 01 589999999999886643 43455666655443321100 00
Q ss_pred hhccCCCch--HHHHHHHHccC----CcHHHHHHHHHHHHHHHHHHHHhCC
Q 013079 280 LMLLGPTMN--PKVAFELSERI----PHLGLRMKEHCHRALIFARRMKKLG 324 (450)
Q Consensus 280 ~~~~g~~~~--~~~a~~~~~~~----~~l~~~~~~~~~~~~~l~~~L~~~~ 324 (450)
....|.-+. ....|+..+.+ +.+.+.+.+..++++++.+.|++.+
T Consensus 426 ~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~ 476 (608)
T TIGR03811 426 YILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLE 476 (608)
T ss_pred cceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 011222222 33444444332 3466778888899999999998864
No 375
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.14 E-value=4e-09 Score=106.95 Aligned_cols=153 Identities=18% Similarity=0.231 Sum_probs=118.5
Q ss_pred hhHHHHHHHHHHHhCCCeE-EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-
Q 013079 99 PTVLNLSRQMAALEGTEAA-YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS- 176 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~~~-~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~- 176 (450)
-...++++..|+.+|++.. ++++| .+.||..++.+++.+||.|++.+++|.+....+. +.|....|+...
T Consensus 70 G~i~eAqe~aA~~fgAd~tyFvvNG---TS~ank~vi~a~~~~GD~VLvdRN~HKSi~~gli-----laGa~Pvyl~p~~ 141 (557)
T COG1982 70 GPIKEAQELAARVFGADHTYFVVNG---TSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLI-----LAGATPVYLEPSR 141 (557)
T ss_pred ccHHHHHHHHHHHhCCCceEEEECC---ccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHH-----HcCCceEEecCCC
Confidence 3578999999999999977 45666 7788889999999999999999999999888764 367777776543
Q ss_pred ----------CHHHHHHhhhc-CCc-eEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCCCC------ccC
Q 013079 177 ----------DHEMVNSAIVQ-GRT-KVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLVLS------PAR 237 (450)
Q Consensus 177 ----------d~~~l~~ai~~-~~t-~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~~~------~~~ 237 (450)
+.+.+++++.+ +.. +++++.+|+. -|.+.++++|.++++..++++.+|++. ..+... ..+
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~ 220 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALN 220 (557)
T ss_pred CccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhh
Confidence 67888777633 344 7777766643 699999999999999999999999996 333222 122
Q ss_pred CCCeEEEeCCCCccccCccceEEEE
Q 013079 238 LGADVVVHSISKFISGGADIIAGAV 262 (450)
Q Consensus 238 ~g~di~~~S~sK~~g~~g~~igG~l 262 (450)
.++|+++.|.||.+++-. .+..+
T Consensus 221 ~~~~~~tqS~HK~l~alS--QaS~i 243 (557)
T COG1982 221 GGADFVTQSTHKLLAALS--QASMI 243 (557)
T ss_pred cCceEEEechhhhhhhhh--hhHHH
Confidence 489999999999998432 43455
No 376
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.13 E-value=7.1e-09 Score=101.19 Aligned_cols=287 Identities=13% Similarity=0.108 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHhCCCeE---EEecChHHHHHHHHHHHHHhc---cC--C---CEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 101 VLNLSRQMAALEGTEAA---YCTASDKAGMSAISSVLMQLC---SS--G---GHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 101 ~~~l~~~iA~l~g~~~~---~~tsg~~~gt~ai~~al~~l~---~~--g---d~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
-.+.-..++.++++.+. ..|+| |++++.++-+... .. | ..|+++...+.++.. +.. .++++
T Consensus 122 e~~~Vnm~~~L~~~~~~~~g~~t~G---~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK----~a~-yf~v~ 193 (491)
T KOG1383|consen 122 EAECVNMIANLFNAPSDSCGCGTVG---GSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEK----AAR-YFEVE 193 (491)
T ss_pred HHHHHHHHHHHhcCCccccCccccc---cchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHH----HHh-hEEEE
Confidence 34445567777876543 67888 9999665554431 11 2 245555544444433 333 37788
Q ss_pred EEEeCCC------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHh-cCCEEEEeCCCCCCCCC-----c--
Q 013079 170 TTFVDIS------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD-KGVTVVVDNTFSPLVLS-----P-- 235 (450)
Q Consensus 170 v~~v~~~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~-~gi~livD~~~~~~~~~-----~-- 235 (450)
+..|+++ |+..+.+.+ +++|.+|+.+.++-|+|.+.|+++|.++..+ +++++|+|.+-++|... +
T Consensus 194 l~~V~~~~~~~~~D~~k~~~~i-~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~ 272 (491)
T KOG1383|consen 194 LREVPLDEGDYRVDPGKVVRMI-DENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEE 272 (491)
T ss_pred EEeeeccccceEecHHHHHHHh-ccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccc
Confidence 8777765 899999999 9999999999999999999999999999999 99999999997666431 1
Q ss_pred cCC---CCeEEEeCCCCccc-cCccceEEEE-EcCHHHH-HHHH---HHhh---hhhhccCCCch--HHHHHH--HHccC
Q 013079 236 ARL---GADVVVHSISKFIS-GGADIIAGAV-CGPANLV-NSMM---DLHQ---GALMLLGPTMN--PKVAFE--LSERI 299 (450)
Q Consensus 236 ~~~---g~di~~~S~sK~~g-~~g~~igG~l-~~~~~~~-~~l~---~~~~---~~~~~~g~~~~--~~~a~~--~~~~~ 299 (450)
.++ +..-++.+.||+.- ++| + +|+ ..++++. .++. .+.. ...+..|+-++ ..++|+ ...+.
T Consensus 273 fdFr~p~V~Sisa~~HKYGl~~~G--~-~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~ 349 (491)
T KOG1383|consen 273 FDFRVPGVTSISADGHKYGLAPAG--S-SWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGE 349 (491)
T ss_pred cccCCCCceeEeeccceeeeeecC--c-EEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhH
Confidence 122 56677888999844 555 4 555 4554433 2221 1111 01111222121 223333 33355
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhccc
Q 013079 300 PHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQNYA 376 (450)
Q Consensus 300 ~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~~~l~~~~ 376 (450)
+...+..++..+....|.+.+++.+. .+..+. .++|.+.+ .....++-+.|..
T Consensus 350 eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp----------------------~vs~~~~~s~~~~i~elsd~l~~-- 405 (491)
T KOG1383|consen 350 EGYRENTQNIVETARKLREGIENIKGIKIVGKP----------------------LVSFILFGSNDVNIFELSDLLRK-- 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccceecCCC----------------------cEEEEEccCCccchhhhhHHHHh--
Confidence 66777888888999999999988643 443322 45555442 1123344445543
Q ss_pred cccccccccccccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhcCC
Q 013079 377 QFGFMAVSLGYYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDSGV 447 (450)
Q Consensus 377 ~~g~i~vs~G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~~~ 447 (450)
+|.+--. + ..|+ ++--...|+.+- .+=.++++.++.+++.++...|.
T Consensus 406 -~GW~lna------l-q~P~---------------a~Hi~vt~~~~~-~~~A~~~v~Di~~~~~el~~~p~ 452 (491)
T KOG1383|consen 406 -KGWILNA------L-QFPA---------------AIHICVTRVHAR-EDVADRFVADIRKVVEELKSLPE 452 (491)
T ss_pred -cCcCccc------c-CCCC---------------ceEEEEEeeecc-HHHHHHHHHHHHHHHHHHHhCCC
Confidence 3332211 1 1111 011134666666 44468889999999999987765
No 377
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.08 E-value=3.2e-09 Score=97.85 Aligned_cols=292 Identities=13% Similarity=0.155 Sum_probs=167.2
Q ss_pred hHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCCCcc----Ce-eEEE
Q 013079 100 TVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPRAC----NI-TTTF 172 (450)
Q Consensus 100 ~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~~~----g~-~v~~ 172 (450)
.++-++...+.+-+-+-++|++| |+||+.++++... .....+|+.+..|++........-+..+ ++ +..|
T Consensus 88 lv~cA~~l~stlPeLsvc~F~NS---GSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~ 164 (452)
T KOG1403|consen 88 LVQCARTLTSTLPELSVCFFVNS---GSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDY 164 (452)
T ss_pred HHHHHHHHhhcCCCceEEEEecC---CchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCce
Confidence 44444555555555566899999 9999999997542 2234577778888876654322211101 11 2233
Q ss_pred eCCC------------------C-----HHHHHHhhhc-----CCceEEEEecCCCCcccccC----HHHHHHHHHhcCC
Q 013079 173 VDIS------------------D-----HEMVNSAIVQ-----GRTKVLYFESISNPTLAVAN----IPELSRLAHDKGV 220 (450)
Q Consensus 173 v~~~------------------d-----~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~~----l~~I~~la~~~gi 220 (450)
|.+. | .+.+++.+++ ....+.+-++.++=.|.+.| .+++++..+.+|-
T Consensus 165 VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGG 244 (452)
T KOG1403|consen 165 VHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGG 244 (452)
T ss_pred eEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCC
Confidence 2210 1 1234443311 13445555777777787755 6789999999999
Q ss_pred EEEEeCCCCCCCC--------CccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhhhhhhccC-CCchHHH
Q 013079 221 TVVVDNTFSPLVL--------SPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQGALMLLG-PTMNPKV 291 (450)
Q Consensus 221 ~livD~~~~~~~~--------~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~~~~~~~g-~~~~~~~ 291 (450)
++|.||+|.+|.. ....+-.|+++ +.|-+| .|-++ +.++..+++.+.+....-++....| +..+...
T Consensus 245 v~IaDEVQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmG-NGhPV-a~VattkeIA~Af~atgv~YFNTyGGnPVsCAv 320 (452)
T KOG1403|consen 245 VCIADEVQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMG-NGHPV-AAVATTKEIAQAFHATGVEYFNTYGGNPVSCAV 320 (452)
T ss_pred eEEeehhhhcccccchhhhhhhhhccccchhe--ecccCC-CCCee-eEEeccHHHHHHhccccceehhccCCCchhHHH
Confidence 9999999855531 11223468887 899998 67778 8888999998888653222322344 4444444
Q ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC--------CHH
Q 013079 292 AFELSERIPHLGLRMKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME--------TEE 363 (450)
Q Consensus 292 a~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~--------~~~ 363 (450)
..+.++-.+. +.......+..++|...|+++..+...-+ +.+|.|.++.+++- ...
T Consensus 321 ~laVm~v~e~-E~Lq~ha~~vG~~L~~lL~~~k~kh~~IG---------------DvRGvGLFiGIdLVkD~~tRtP~tk 384 (452)
T KOG1403|consen 321 GLAVMRVCED-ENLQEHAQQVGEKLEVLLRRLKQKHECIG---------------DVRGVGLFIGIDLVKDRKTRTPDTK 384 (452)
T ss_pred HHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHhhhcccee---------------ccccceEEEeeeeecccccCCCcHH
Confidence 4333332221 11112223344455555554432211111 34578889999874 223
Q ss_pred HHHHHHHHhhcccccccccccc-ccccccccccccccCCCCCHHHHHhcCCCCCeEE----EEeCCCCCHHHHHHHHHHH
Q 013079 364 KANRLMNYLQNYAQFGFMAVSL-GYYETLMSCSGSSTSSELNAEEKALAGISAGLVR----MSVGYLGTLDQRWSQFEKA 438 (450)
Q Consensus 364 ~~~~~~~~l~~~~~~g~i~vs~-G~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iR----iS~g~~~~~~~~i~~l~~a 438 (450)
.+..++.+|+. .++ +..|. |... +.+. ++|. .++.++.+..|.++
T Consensus 385 ~A~~~v~rlke--~y~-VLlsaDGPh~--------------------------NilKiKPPmCFn-eena~e~v~~ld~i 434 (452)
T KOG1403|consen 385 EAHWVVNRLKE--LYR-VLLSADGPHR--------------------------NILKIKPPMCFN-EENADEFVLGLDEI 434 (452)
T ss_pred HHHHHHHHHHH--hhh-EEEecCCCCC--------------------------ceeecCCCcccC-hhhHHHHHHHHHHH
Confidence 35566677765 233 23332 2111 2222 3566 88999999999999
Q ss_pred HHHhhh
Q 013079 439 LSRMQD 444 (450)
Q Consensus 439 l~~~~~ 444 (450)
|.-+.+
T Consensus 435 LT~mee 440 (452)
T KOG1403|consen 435 LTVMEE 440 (452)
T ss_pred HHHHHH
Confidence 986644
No 378
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.05 E-value=9e-09 Score=97.51 Aligned_cols=288 Identities=15% Similarity=0.161 Sum_probs=147.6
Q ss_pred hhHHHHHHHHHHHh---C-----CCeEEEecChHHHHHHHHHHHHHhccC----C--CEEEEeCCCchhHHHHHHHhCCC
Q 013079 99 PTVLNLSRQMAALE---G-----TEAAYCTASDKAGMSAISSVLMQLCSS----G--GHVVAARTLYGGTHALLTHFFPR 164 (450)
Q Consensus 99 ~~~~~l~~~iA~l~---g-----~~~~~~tsg~~~gt~ai~~al~~l~~~----g--d~Vi~~~~~y~~~~~~~~~~~~~ 164 (450)
-...+|++.|-++. | ...++|.+| +|+-+++++.+|... + -+|+...|.|+.+.... .++..
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtG---sTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt-~~f~s 118 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTG---STQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQT-DFFDS 118 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECH---HHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHC-CCT-B
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCC---HHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHH-Hhccc
Confidence 34566777776665 3 235899999 999999999988533 1 27999999999887765 34332
Q ss_pred ccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeE
Q 013079 165 ACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADV 242 (450)
Q Consensus 165 ~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di 242 (450)
.. ..|-. |.......= ...+-+=+|++||||.|.+.. . +++.-+..+|-|-+| .++.--+...+-|+
T Consensus 119 -~~--y~w~G--da~~~~~~~-~~~~~IElVTSPNNPDG~lr~--~---V~~g~~~k~I~D~AYYWPhyTpI~~~aD~Di 187 (363)
T PF04864_consen 119 -RL--YKWAG--DASNFKNSD-NPSPYIELVTSPNNPDGQLRE--A---VLNGSSGKVIHDLAYYWPHYTPITAPADHDI 187 (363)
T ss_dssp -TT--EEEEE--ECCCGTT-S--CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SE
T ss_pred -cC--ccccc--cHHhhccCC-CCCCeEEEEeCCCCCcccccc--h---hcCCCCcceeeeeeeecccccccCCCCCCce
Confidence 22 22211 111111100 123445567899999998742 1 224456678999997 33322222345699
Q ss_pred EEeCCCCccccCccceEEE-EEcCHHHHHHHHHHhhhhhhccCCC-chHHHHHHHHc----cCC------cH-HHHHHHH
Q 013079 243 VVHSISKFISGGADIIAGA-VCGPANLVNSMMDLHQGALMLLGPT-MNPKVAFELSE----RIP------HL-GLRMKEH 309 (450)
Q Consensus 243 ~~~S~sK~~g~~g~~igG~-l~~~~~~~~~l~~~~~~~~~~~g~~-~~~~~a~~~~~----~~~------~l-~~~~~~~ 309 (450)
+++|+||.=|=.|.|+ || ++.++++.+++..+..- ...|.. -+|.-|..++. +.. .+ .--.+.+
T Consensus 188 MLFT~SK~TGHAGSR~-GWAlVKD~~Va~kM~~y~~l--nTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M 264 (363)
T PF04864_consen 188 MLFTLSKLTGHAGSRF-GWALVKDEEVAKKMTKYMEL--NTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTM 264 (363)
T ss_dssp EEEEHHHHCS-GGG-E-EEEEES-HHHHHHHHHHHHH--HCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHH
T ss_pred EEEEEecccCcccccc-ceeeecCHHHHHHHHHHHHH--hcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHH
Confidence 9999999999889999 66 57778888888766541 123322 23333322222 111 11 1122334
Q ss_pred HHHHHHHHHHHHhCCCeeeCCCCCCCchhH-HHHHHhccCCCcCcEEEEEeCC--HHHHHHHHHHhhccccccccccccc
Q 013079 310 CHRALIFARRMKKLGLKVLYPGLEDHPHHE-LLKSMANKEYGFGGLLCLDMET--EEKANRLMNYLQNYAQFGFMAVSLG 386 (450)
Q Consensus 310 ~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~-l~~~~~~~~~g~g~~~~~~l~~--~~~~~~~~~~l~~~~~~g~i~vs~G 386 (450)
+++-++|.+.+..-. ++..|.++. ++. ..++.. ...+.+.|+.+.. .++...++...++.+ ..|
T Consensus 265 ~~RW~~L~~~~~~S~-rFSLq~~~~--~yC~ff~~~~---~psPafAWlkCe~eed~DC~~~l~~~~I~t-------r~G 331 (363)
T PF04864_consen 265 RERWEKLRAAVSASK-RFSLQKFSP--QYCNFFKRVR---EPSPAFAWLKCEREEDEDCYAVLREAKIIT-------RSG 331 (363)
T ss_dssp HHHHHHHHHHHCCSS-SEEE---SC--EEETTTTCEE---E---SEEEEEESSCGGSSHHHHHHCTTEEE-------EEG
T ss_pred HHHHHHHHHHHHhcC-ceecCcCCc--hhcccccccc---CCCCCeEEEecCCcccccHHHHHHhCCccc-------CCC
Confidence 555566666665432 333343321 100 001110 0135589999983 346778887766522 112
Q ss_pred cccccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Q 013079 387 YYETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRM 442 (450)
Q Consensus 387 ~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~ 442 (450)
. ..|.+..++|||+- +.++..+.|.+-|..+
T Consensus 332 ~----------------------~fga~~ryVRlSml---~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 332 V----------------------LFGADSRYVRLSML---KRDDDFDQLLERLSKL 362 (363)
T ss_dssp G----------------------GGTS-TTEEEEESS---S-HHHHHHHHHHHHCC
T ss_pred C----------------------ccCCCCCeEEEecc---CCHHHHHHHHHHHHhh
Confidence 1 13556789999998 6777777777666543
No 379
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.02 E-value=9.9e-08 Score=102.81 Aligned_cols=213 Identities=14% Similarity=0.083 Sum_probs=136.5
Q ss_pred hhHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHh--cc-CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe
Q 013079 99 PTVLNLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQL--CS-SGGHVVAARTLYGGTHALLTHFFPRACNITTTFV 173 (450)
Q Consensus 99 ~~~~~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l--~~-~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v 173 (450)
+.+-+++..|+++.|-+ ++-+.-+ +|++-++++++. .+ +..+|+++...|+.+...++..... .|++++.
T Consensus 124 qal~e~Qtmi~~LtGm~vaNASl~D~---atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~-~g~~i~~- 198 (954)
T PRK12566 124 EALLNFQQMTIDLTGLDLANASLLDE---ATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEG-FGFELVV- 198 (954)
T ss_pred HHHHHHHHHHHHHhCchhhhhhhccc---hhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhc-CCcEEEE-
Confidence 45567889999999976 4445555 555444333332 12 2458999999999999988766554 7888775
Q ss_pred CCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC---CCCCCCccCCCCeEEEeCCCC-
Q 013079 174 DISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF---SPLVLSPARLGADVVVHSISK- 249 (450)
Q Consensus 174 ~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~---~~~~~~~~~~g~di~~~S~sK- 249 (450)
+++++.+ .+++..|++++|| -.|.+.|+++|.+++|++|.++++ .+- -.+...|-++|+|+++++..-
T Consensus 199 -----~~~~~~~-~~~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~~Q~f 270 (954)
T PRK12566 199 -----DAVDNLA-AHAVFGALLQYPD-THGEIRDLRPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGSTQRF 270 (954)
T ss_pred -----cchhhcC-CCCEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeCCCcC
Confidence 3344455 5678999999986 589999999999999999998664 332 233457888999999886543
Q ss_pred ----ccccCccceEEEEEcCHHHHHHHHH-------------------------HhhhhhhccCCCchHH-----HHHHH
Q 013079 250 ----FISGGADIIAGAVCGPANLVNSMMD-------------------------LHQGALMLLGPTMNPK-----VAFEL 295 (450)
Q Consensus 250 ----~~g~~g~~igG~l~~~~~~~~~l~~-------------------------~~~~~~~~~g~~~~~~-----~a~~~ 295 (450)
.||||. +|++..++++...+-. .|+.-.+.+-.+.... ..++.
T Consensus 271 Gvp~~~GGP~---ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~ 347 (954)
T PRK12566 271 GVPMGYGGPH---AAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAV 347 (954)
T ss_pred CCCCCCCCCC---eeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHH
Confidence 344444 5999888776654410 1111111111111111 11122
Q ss_pred HccCCcHHHHHHHHHHHHHHHHHHHHhCCCee
Q 013079 296 SERIPHLGLRMKEHCHRALIFARRMKKLGLKV 327 (450)
Q Consensus 296 ~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~v 327 (450)
..+.+-+.+..++...++.++.+.|.+.|.++
T Consensus 348 ~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~ 379 (954)
T PRK12566 348 YHGPEGLKRIAQRVHRLTAILAAGLEAKGIKR 379 (954)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 22334455555566778888999998877654
No 380
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.00 E-value=3.5e-08 Score=95.65 Aligned_cols=216 Identities=19% Similarity=0.183 Sum_probs=143.0
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh---c-cCC----CEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL---C-SSG----GHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l---~-~~g----d~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
...+.+|++.|.++.|-+.+.+.+. +|.++=.+.++.+ - ..| +.+++++..|+.....+. +.|.+
T Consensus 108 l~li~~Lq~~L~~ITG~DavsLQP~--AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAa-----m~G~~ 180 (496)
T COG1003 108 LELIYELQEWLKEITGMDAVSLQPN--AGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAA-----MAGFK 180 (496)
T ss_pred HHHHHHHHHHHHHhcCCceeeccCC--CCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHh-----hcCce
Confidence 4567889999999999998866543 1666655555433 2 223 578899999987766654 47999
Q ss_pred EEEeCCC-----CHHHHHHhhhcCCceEEEEecCCCCcccc-cCHHHHHHHHHhcCCEEEEeCCC--CCC-CCCccCCCC
Q 013079 170 TTFVDIS-----DHEMVNSAIVQGRTKVLYFESISNPTLAV-ANIPELSRLAHDKGVTVVVDNTF--SPL-VLSPARLGA 240 (450)
Q Consensus 170 v~~v~~~-----d~~~l~~ai~~~~t~lv~i~~~~NptG~v-~~l~~I~~la~~~gi~livD~~~--~~~-~~~~~~~g~ 240 (450)
|+.|+.+ |+++|++.+ .+++.++.|++||. .|.. .+|.+|+++.+++|..+..|.+- .-+ ..+|-++|.
T Consensus 181 VV~V~~~~~G~VDlddLk~k~-~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~ 258 (496)
T COG1003 181 VVVVKCDENGNVDLDDLRAKA-EDNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGF 258 (496)
T ss_pred EEEEecCCCCCccHHHHHHHh-ccceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhcccccccccc
Confidence 9998765 999999999 78999999999864 4544 57999999999999999999884 222 247888999
Q ss_pred eEEEeCCCCccccC---ccceEEEEEcCHHHHHHHHH---Hhhh---------------hhhccCCCchHHHHHH--HHc
Q 013079 241 DVVVHSISKFISGG---ADIIAGAVCGPANLVNSMMD---LHQG---------------ALMLLGPTMNPKVAFE--LSE 297 (450)
Q Consensus 241 di~~~S~sK~~g~~---g~~igG~l~~~~~~~~~l~~---~~~~---------------~~~~~g~~~~~~~a~~--~~~ 297 (450)
|++=.-+||.|+.| |.+-.|=+..+..+..-+-. .... .....|+......+|. ...
T Consensus 259 DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~m 338 (496)
T COG1003 259 DVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMM 338 (496)
T ss_pred ceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHH
Confidence 99999999998643 11111444444333321100 0000 0012233322333333 222
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHh
Q 013079 298 RIPHLGLRMKEHCHRALIFARRMKK 322 (450)
Q Consensus 298 ~~~~l~~~~~~~~~~~~~l~~~L~~ 322 (450)
+.+-+.+..+...-+++++.++|+.
T Consensus 339 G~~GL~~ase~AvLNANYia~rL~~ 363 (496)
T COG1003 339 GADGLKQASEVAVLNANYIARRLKG 363 (496)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHhhh
Confidence 3444555555667788899999986
No 381
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.88 E-value=7.4e-07 Score=82.91 Aligned_cols=231 Identities=13% Similarity=0.129 Sum_probs=134.5
Q ss_pred EEecChHHHHHHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCCCccCe----eEEEeCCC----CHHHHHHhhhc
Q 013079 118 YCTASDKAGMSAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPRACNI----TTTFVDIS----DHEMVNSAIVQ 187 (450)
Q Consensus 118 ~~tsg~~~gt~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~----~v~~v~~~----d~~~l~~ai~~ 187 (450)
+-+-| ||.|+.++..-+. -....|-+++|+|......+.. .|+ ...+.+.. |++.+...|+.
T Consensus 103 vQsls---GTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~-----aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~ 174 (410)
T KOG1412|consen 103 VQSLS---GTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEK-----AGFTTVATYPYWDAENKCVDLEGFLSDLES 174 (410)
T ss_pred eeecc---ccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHH-----cCCceeeeeeeecCCCceecHHHHHHHHhh
Confidence 45567 8999988776542 2345788999999999888863 442 23333333 77777777732
Q ss_pred CCce-EEEEe-cCCCCccccc---CHHHHHHHHHhcCCEEEEeCCCCCCC-CCcc----------CCCC-eEEEeCCCCc
Q 013079 188 GRTK-VLYFE-SISNPTLAVA---NIPELSRLAHDKGVTVVVDNTFSPLV-LSPA----------RLGA-DVVVHSISKF 250 (450)
Q Consensus 188 ~~t~-lv~i~-~~~NptG~v~---~l~~I~~la~~~gi~livD~~~~~~~-~~~~----------~~g~-di~~~S~sK~ 250 (450)
.... ++.+. ..+||||.-. ....|++..++++...+.|-+|.++. .++. +.|. -+++.||+|.
T Consensus 175 APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKN 254 (410)
T KOG1412|consen 175 APEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKN 254 (410)
T ss_pred CCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhh
Confidence 2223 33333 3599999765 36678888889999999999985553 2221 1133 4899999999
Q ss_pred cccCccceEEEE---EcCHHHHHHHH----HHhhhhhhccCCCchHHHHHHHHccCCcHHH-------HHHHHHHHHHHH
Q 013079 251 ISGGADIIAGAV---CGPANLVNSMM----DLHQGALMLLGPTMNPKVAFELSERIPHLGL-------RMKEHCHRALIF 316 (450)
Q Consensus 251 ~g~~g~~igG~l---~~~~~~~~~l~----~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~-------~~~~~~~~~~~l 316 (450)
+|.-+.|+ |-+ +.++..+..+. ..... ....++......+...+...+..++ ...|..+.|..|
T Consensus 255 fGlYneRv-Gnltvv~~n~a~i~~v~SQl~lviR~-~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aL 332 (410)
T KOG1412|consen 255 FGLYNERV-GNLTVVVNNPAVIAGVKSQLTLVIRS-NWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTAL 332 (410)
T ss_pred cccccccc-cceEEEecChhHHHHHHHHHHHHHhh-ccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 544 33454444332 22220 0122333333333333332222222 223445566666
Q ss_pred HHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 317 ARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 317 ~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
++.|..++ .|+--+| .. ..-||+++.=-++...+.+++...+
T Consensus 333 rd~L~aL~----TPGtWDH--------I~----~QiGMFSyTGLtp~qV~~li~~h~v 374 (410)
T KOG1412|consen 333 RDHLVALK----TPGTWDH--------IT----QQIGMFSYTGLTPAQVDHLIENHKV 374 (410)
T ss_pred HHHHHhcC----CCCcHHH--------HH----hhccceeecCCCHHHHHHHHHhceE
Confidence 66666543 4542221 11 1345788775566667777766554
No 382
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.81 E-value=3.3e-06 Score=80.35 Aligned_cols=305 Identities=16% Similarity=0.167 Sum_probs=172.4
Q ss_pred CCCCChhHHHhhcCCCCCCCCcccccccccCccccCCH-HHHHHhhcCCCCC--CCCCccccCCCChhHHHHHH----HH
Q 013079 36 AAWEDPAAALASARHEFGEHGGVNMSIEASATFTVMEP-ETMRRMFAGELGP--DRDFFIYSRHFNPTVLNLSR----QM 108 (450)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~pi~~att~~~~~~-~~~~~~~~~~~~n--~~~~~~y~r~~~~~~~~l~~----~i 108 (450)
++..||+..-.--....-+..++. +-+|-.|+...+ +++-..+.+.|.. |.. -.|| ++..+++++. +-
T Consensus 21 l~~~DPev~~ii~~Ek~RQ~~gie--LIaSENFts~aVmeAlGS~ltNKYSEGyPG~-RYYG--Gne~ID~iE~LCq~RA 95 (477)
T KOG2467|consen 21 LEEVDPEVHDIIEKEKERQKRGIE--LIASENFTSRAVMEALGSCLTNKYSEGYPGA-RYYG--GNEYIDQIELLCQKRA 95 (477)
T ss_pred hhhcChHHHHHHHHHHHhhhccee--EeecccchHHHHHHHHhHHhhcccccCCCcc-cccC--cchHHHHHHHHHHHHH
Confidence 555677654443221222222232 345666665443 5555555555421 211 1233 5666655443 23
Q ss_pred HHHhCCCe----E-EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHH-HHhCCCccCeeEEEe-------CC
Q 013079 109 AALEGTEA----A-YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALL-THFFPRACNITTTFV-------DI 175 (450)
Q Consensus 109 A~l~g~~~----~-~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~-~~~~~~~~g~~v~~v-------~~ 175 (450)
-+.++.++ + +-.=| |+.||..+..+++.|+++|.-.+.-.++....- ..-..+ ......|. +.
T Consensus 96 LeaF~ldp~kWGVNVQp~S---GSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kk-ISa~SiyFeSmPYkv~~ 171 (477)
T KOG2467|consen 96 LEAFGLDPEKWGVNVQPYS---GSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKK-ISATSIYFESMPYKVDP 171 (477)
T ss_pred HHHhCCCHHHCceeeccCC---CCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCce-eeeeeeecccCceeeCC
Confidence 33456543 2 33446 789999999999999999986665444432210 000011 11111111 11
Q ss_pred C----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCC-----CCccCCCCeEEEe
Q 013079 176 S----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLV-----LSPARLGADVVVH 245 (450)
Q Consensus 176 ~----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~-----~~~~~~g~di~~~ 245 (450)
. |-|.|++....-++++++.-... --...|..++.++|.+.|+.+++|-++ +++. -+|.++ +|+|+.
T Consensus 172 ~TG~IDYD~Le~~A~~frPk~iiaG~Sa--Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTT 248 (477)
T KOG2467|consen 172 STGYIDYDKLEKTATLFRPKLIIAGTSA--YSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTT 248 (477)
T ss_pred CCCceehHHHHHHHHhcCCcEEEecccc--chhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeec
Confidence 1 78888876535578887753222 234578999999999999999999987 4442 345544 899999
Q ss_pred CCCCccccCccceEEEEEcCH---------------HHHHHHHHHhhhhhhccCCCchHHHHHH-HHc--cCCcHHHHHH
Q 013079 246 SISKFISGGADIIAGAVCGPA---------------NLVNSMMDLHQGALMLLGPTMNPKVAFE-LSE--RIPHLGLRMK 307 (450)
Q Consensus 246 S~sK~~g~~g~~igG~l~~~~---------------~~~~~l~~~~~~~~~~~g~~~~~~~a~~-~~~--~~~~l~~~~~ 307 (450)
+.||.+-+|- ||.+.-++ ++-+++...--. ....|+.....++.+ ++. .-..+.+..+
T Consensus 249 TTHKsLRGPR---g~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP-~lQGGPHNhtIaalAvALkQa~tpefk~Yq~ 324 (477)
T KOG2467|consen 249 TTHKSLRGPR---GAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFP-GLQGGPHNHTIAALAVALKQAMTPEFKEYQK 324 (477)
T ss_pred cccccccCCc---ceeEEEeccCCcCCCCCCCcceechhhhhhhhccc-cccCCCCcchHHHHHHHHHhhCCHHHHHHHH
Confidence 9999997663 57664322 122233211100 012233322222222 222 2244666777
Q ss_pred HHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeC----CHHHHHHHHHHhhc
Q 013079 308 EHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDME----TEEKANRLMNYLQN 374 (450)
Q Consensus 308 ~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~----~~~~~~~~~~~l~~ 374 (450)
+..+++..|++.|.+.|.++...+..+ .++-+++. +...++.+++.+.+
T Consensus 325 qV~~Nakala~~l~~~Gy~lvtgGTDn------------------HlvLvDLr~~G~dGarvE~vle~~~I 377 (477)
T KOG2467|consen 325 QVLKNAKALASALISRGYKLVTGGTDN------------------HLVLVDLRPKGVDGARVEKVLELCHI 377 (477)
T ss_pred HHHHHHHHHHHHHHHcCceEecCCccc------------------eEEEEeccccCCchHHHHHHHHHhhh
Confidence 789999999999999998776555322 26777776 45567888887764
No 383
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.71 E-value=5.6e-06 Score=81.14 Aligned_cols=254 Identities=13% Similarity=0.159 Sum_probs=144.8
Q ss_pred ccccCCCChhHHHHHHHHHHH----hCC----------Ce-EEEecChHHHHHHHHHHHHHhc-------cCC-------
Q 013079 91 FIYSRHFNPTVLNLSRQMAAL----EGT----------EA-AYCTASDKAGMSAISSVLMQLC-------SSG------- 141 (450)
Q Consensus 91 ~~y~r~~~~~~~~l~~~iA~l----~g~----------~~-~~~tsg~~~gt~ai~~al~~l~-------~~g------- 141 (450)
-.++..+.|...+|+..+-+. ++- +. -++-.+ ++++...++.+.. +.+
T Consensus 101 vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~t---ases~lvallaaR~~~i~~~k~~~p~~~e~ 177 (511)
T KOG0628|consen 101 VGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGT---ASESVLVALLAARTEKIEEIKSRPPELHES 177 (511)
T ss_pred ccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecC---cchhHHHHHHHHHHHHHHHhhcCCCcccch
Confidence 335566789999999655544 431 11 255566 7888888776531 112
Q ss_pred ----CE-EEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHHHHhhhcCC----ceEEEEecCCCCcccc--
Q 013079 142 ----GH-VVAARTLYGGTHALLTHFFPRACNITTTFVDIS-----DHEMVNSAIVQGR----TKVLYFESISNPTLAV-- 205 (450)
Q Consensus 142 ----d~-Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~ai~~~~----t~lv~i~~~~NptG~v-- 205 (450)
+- +-+++-.|.++...+. +.|++.+.++.+ +.+.|+++|.++. +-.+++.+. .-||..
T Consensus 178 ~~~~~lV~Y~SDqahssveka~~-----i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~-GTT~~ca~ 251 (511)
T KOG0628|consen 178 SVLARLVAYCSDQAHSSVEKACL-----IAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATL-GTTSSCAF 251 (511)
T ss_pred hhhhhheEEecCcccchHHHhHh-----hcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEee-cCcccccc
Confidence 11 3356777887777653 467788887765 6788888883322 223333332 234444
Q ss_pred cCHHHHHHHHHhcCCEEEEeCCC-CCCCC-C---ccCC---CCeEEEeCCCCccccCccceEEEEEcCH-HH-----HHH
Q 013079 206 ANIPELSRLAHDKGVTVVVDNTF-SPLVL-S---PARL---GADVVVHSISKFISGGADIIAGAVCGPA-NL-----VNS 271 (450)
Q Consensus 206 ~~l~~I~~la~~~gi~livD~~~-~~~~~-~---~~~~---g~di~~~S~sK~~g~~g~~igG~l~~~~-~~-----~~~ 271 (450)
.++.+|..+|+++|+++|||++| +.... . ...- -+|-+..-.||++-..-+.. ..-+.+. .+ .++
T Consensus 252 D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs-~lWvkd~~~~~~~~~vdp 330 (511)
T KOG0628|consen 252 DELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCS-PLWVKDGTKLSRAFNVDP 330 (511)
T ss_pred ccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeee-cceeecCceeeeeeecCh
Confidence 58999999999999999999999 33321 1 1111 25777778888876554332 2222221 11 111
Q ss_pred HH--H--------HhhhhhhccCCCchHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC-eeeCCCCCCCchh
Q 013079 272 MM--D--------LHQGALMLLGPTMNPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGL-KVLYPGLEDHPHH 338 (450)
Q Consensus 272 l~--~--------~~~~~~~~~g~~~~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~-~v~~p~~~~~p~~ 338 (450)
+. . ++. +....|--.-..-.|..++ +.+.+.++++++.++++.+.+.+.+-+. ++.-|.
T Consensus 331 ~yL~h~~~~~~~Dyrh-wqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~------- 402 (511)
T KOG0628|consen 331 LYLKHAYQGSAPDYRH-WQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKR------- 402 (511)
T ss_pred HhhcchhhccCCCccc-cccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccc-------
Confidence 11 0 011 1111222222333344333 4566777788888777777776655432 433332
Q ss_pred HHHHHHhccCCCcCcEEEEEeCC-HHHHHHHHHHhhc
Q 013079 339 ELLKSMANKEYGFGGLLCLDMET-EEKANRLMNYLQN 374 (450)
Q Consensus 339 ~l~~~~~~~~~g~g~~~~~~l~~-~~~~~~~~~~l~~ 374 (450)
.=++++|++++ .+..+.|++++..
T Consensus 403 ------------~lgLvcFRlk~~N~~ne~Ll~~in~ 427 (511)
T KOG0628|consen 403 ------------ILGLVCFRLKGDNEINEALLNRLNS 427 (511)
T ss_pred ------------ccceeEEeecCCcHHHHHHHHHHHh
Confidence 22389999983 3446778888764
No 384
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.59 E-value=1.9e-06 Score=83.52 Aligned_cols=216 Identities=10% Similarity=0.056 Sum_probs=137.5
Q ss_pred HHHHHHHHHHhCCC---eEEEecChHHHHHHHHHHHHHhc---cC-----C-----CE-EEEeCCCchhHHHHHHHhCCC
Q 013079 102 LNLSRQMAALEGTE---AAYCTASDKAGMSAISSVLMQLC---SS-----G-----GH-VVAARTLYGGTHALLTHFFPR 164 (450)
Q Consensus 102 ~~l~~~iA~l~g~~---~~~~tsg~~~gt~ai~~al~~l~---~~-----g-----d~-Vi~~~~~y~~~~~~~~~~~~~ 164 (450)
.+.-..+-++.|.+ .-+|++| |+-++..++.+.. -| | +- +.+++-+|.++..... ++.
T Consensus 144 ~~vl~km~~ivGw~~~~DgIf~pg---gsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa-~lg- 218 (510)
T KOG0629|consen 144 EEVLAKMREIVGWEEGGDGIFAPG---GSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAA-FLG- 218 (510)
T ss_pred HHHHHHHHHHhCCCCCCCceecCC---chhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHH-Hhc-
Confidence 34445555666654 4599999 9888887776432 11 2 23 3467778888877764 222
Q ss_pred ccC-eeEEEeCCC-----CHHHHHHhhhc--CC---ceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC-CCCC
Q 013079 165 ACN-ITTTFVDIS-----DHEMVNSAIVQ--GR---TKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF-SPLV 232 (450)
Q Consensus 165 ~~g-~~v~~v~~~-----d~~~l~~ai~~--~~---t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~-~~~~ 232 (450)
+| -.+..|+.+ ++++|++.|.. .+ +-+|..+.-....|...|+..|+++|++|++++|||+++ +++.
T Consensus 219 -~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglL 297 (510)
T KOG0629|consen 219 -LGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLL 297 (510)
T ss_pred -cCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccc
Confidence 12 345555544 78888887732 22 345666666667788899999999999999999999999 4454
Q ss_pred CCcc---CC----CCeEEEeCCCCccccCccceEEEEEc-CHHHHHHHHHHhhhh-----------------hhccCCCc
Q 013079 233 LSPA---RL----GADVVVHSISKFISGGADIIAGAVCG-PANLVNSMMDLHQGA-----------------LMLLGPTM 287 (450)
Q Consensus 233 ~~~~---~~----g~di~~~S~sK~~g~~g~~igG~l~~-~~~~~~~l~~~~~~~-----------------~~~~g~~~ 287 (450)
.+.. .+ .++-++.+.||.+|.+ ... +.+.. -..++++.......+ ....|-..
T Consensus 298 mS~k~R~kl~Giera~SvtwnpHK~~gap-lqC-sa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~ 375 (510)
T KOG0629|consen 298 MSRKHRHKLTGIERANSVTWNPHKLMGAP-LQC-SAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHV 375 (510)
T ss_pred cChhhHhhccCccccCceeecHHHhhcCc-chh-hHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccc
Confidence 4321 11 4789999999999965 333 44333 333444432211100 11223233
Q ss_pred hHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHhCCC
Q 013079 288 NPKVAFELSE--RIPHLGLRMKEHCHRALIFARRMKKLGL 325 (450)
Q Consensus 288 ~~~~a~~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 325 (450)
...--|+.++ +...+++.+.+..++++++.++|++.+.
T Consensus 376 D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~ 415 (510)
T KOG0629|consen 376 DVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREG 415 (510)
T ss_pred cHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3444555544 4566888899999999999999998765
No 385
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.58 E-value=3.1e-06 Score=82.56 Aligned_cols=152 Identities=13% Similarity=0.182 Sum_probs=96.2
Q ss_pred CeEEEecChHHHH-HHHHHHHHHhc--cCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC----C----CHHHHHH
Q 013079 115 EAAYCTASDKAGM-SAISSVLMQLC--SSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDI----S----DHEMVNS 183 (450)
Q Consensus 115 ~~~~~tsg~~~gt-~ai~~al~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~----~----d~~~l~~ 183 (450)
..+++++- +| .++.+++.++. ..++.|+.+...+.+....+. ..|.++..|+. + |++.+++
T Consensus 75 ~~~~~vP~---atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~-----~AGl~~~vV~~~~~~d~l~td~~~ie~ 146 (389)
T PF05889_consen 75 KSCFVVPM---ATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIE-----RAGLEPVVVENVLEGDELITDLEAIEA 146 (389)
T ss_dssp CEEEEESS----HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHH-----HTT-EEEEE-EEEETTEEEEHHHHHHH
T ss_pred cceEEEec---ccccHHHHHHHHHhcccCCceEEEeeccccchHHHHH-----hcCCeEEEeeccCCCCeeeccHHHHHH
Confidence 45677766 54 34556666653 346889999988888777765 25777766663 1 6778887
Q ss_pred hhhc--CCceEEEEecCCCCcccccC-HHHHHHHHHhcCCEEEEeCCCCCCCC-------CccCC-CCeEEEeCCCCccc
Q 013079 184 AIVQ--GRTKVLYFESISNPTLAVAN-IPELSRLAHDKGVTVVVDNTFSPLVL-------SPARL-GADVVVHSISKFIS 252 (450)
Q Consensus 184 ai~~--~~t~lv~i~~~~NptG~v~~-l~~I~~la~~~gi~livD~~~~~~~~-------~~~~~-g~di~~~S~sK~~g 252 (450)
.+++ ++..+.++.++.---+.+.| +.+|+++|+++||+.++.++|+--.. ..... ..|+++.|.-|.|-
T Consensus 147 ~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~ 226 (389)
T PF05889_consen 147 KIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFM 226 (389)
T ss_dssp HHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHC
T ss_pred HHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEE
Confidence 7732 35577778888888888988 99999999999999999999843110 01112 36888888888887
Q ss_pred cCccceEEEE-Ec-CHHHHHHHHHHhh
Q 013079 253 GGADIIAGAV-CG-PANLVNSMMDLHQ 277 (450)
Q Consensus 253 ~~g~~igG~l-~~-~~~~~~~l~~~~~ 277 (450)
.|- ||.+ .+ ++..+..+.....
T Consensus 227 VPv---Ggai~As~~~~~i~~vs~~Yp 250 (389)
T PF05889_consen 227 VPV---GGAIMASFDPSGILAVSKEYP 250 (389)
T ss_dssp EES---SHEEEEESSHHHHHHHHHTSH
T ss_pred ecC---CCcEEEecCHHHHHHHHHHhh
Confidence 552 4444 33 4567777765433
No 386
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.56 E-value=1.7e-05 Score=75.44 Aligned_cols=219 Identities=18% Similarity=0.155 Sum_probs=129.4
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccC-----CCEEEEeCCCchhHHH-HHHHhCCCccCeeEE
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSS-----GGHVVAARTLYGGTHA-LLTHFFPRACNITTT 171 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~-----gd~Vi~~~~~y~~~~~-~~~~~~~~~~g~~v~ 171 (450)
+.....|++.+-+.+|-+.++-|.. |..|-+..+..++++ |.+.++.+..|..+.. ..+ ..|..+.
T Consensus 78 srs~~~L~~avkdifGfq~~iPthQ---GRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~-----~ng~~~~ 149 (471)
T COG3033 78 SRSYYALADAVKDIFGFQYTIPTHQ---GRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ-----INGATPR 149 (471)
T ss_pred cccHHHHHHHHHHhcCceeeeeccC---CccHHHHHHHHHhhhccccCCccccccccceecchhHHHH-----hcCCccc
Confidence 4456778899999999988999999 888877777666654 4455566666554433 222 1232222
Q ss_pred EeCC---------------CCHHHHHHhhhc---CCceEEEEecCCCCcccc----cCHHHHHHHHHhcCCEEEEeCCC-
Q 013079 172 FVDI---------------SDHEMVNSAIVQ---GRTKVLYFESISNPTLAV----ANIPELSRLAHDKGVTVVVDNTF- 228 (450)
Q Consensus 172 ~v~~---------------~d~~~l~~ai~~---~~t~lv~i~~~~NptG~v----~~l~~I~~la~~~gi~livD~~~- 228 (450)
-+.. -|++.|++.|.. ++.-.|++.--+|..|.. .+++++.++|++|+++++.|.+.
T Consensus 150 n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~Rf 229 (471)
T COG3033 150 NVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARF 229 (471)
T ss_pred cccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhh
Confidence 1111 188899988831 356666665555555433 46889999999999999999883
Q ss_pred ---CCCC------C---CccCC------CCeEEEeCCCCccccCccceEEEEEcCHH----HHHHHHHHh--hhhhhccC
Q 013079 229 ---SPLV------L---SPARL------GADVVVHSISKFISGGADIIAGAVCGPAN----LVNSMMDLH--QGALMLLG 284 (450)
Q Consensus 229 ---~~~~------~---~~~~~------g~di~~~S~sK~~g~~g~~igG~l~~~~~----~~~~l~~~~--~~~~~~~g 284 (450)
..|. + +..++ -+|-++.|+-|-.-.. |||+++.+++ +...++... +......|
T Consensus 230 aENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvn---mGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYG 306 (471)
T COG3033 230 AENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVN---MGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYG 306 (471)
T ss_pred hhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceec---cccEEEecCccHHHHHHHHHhheEeeccccccC
Confidence 1121 1 11111 3788999999976543 6899976654 555554321 11111222
Q ss_pred CCch-HHHHHH-HH-cc--CCcHHHHHHHHHHHHHHHHHHHHhCCCeeeCCC
Q 013079 285 PTMN-PKVAFE-LS-ER--IPHLGLRMKEHCHRALIFARRMKKLGLKVLYPG 331 (450)
Q Consensus 285 ~~~~-~~~a~~-~~-~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~~v~~p~ 331 (450)
+... ...+.+ .+ .. ..++..|+ ...++|.+.|.+.|.++..|.
T Consensus 307 gl~GrdmealAvGL~e~~~~~yl~~Rv----~Qv~YL~~~l~~~GVpi~~pa 354 (471)
T COG3033 307 GLAGRDMEALAVGLREGVNFDYLAHRV----AQVQYLADGLEEAGVPIVQPA 354 (471)
T ss_pred cccchhHHHHHHHHHHhcCcHHHHHHH----HHHHHHHHHHHhcCCeeEecC
Confidence 2211 111111 11 11 22344444 345688999999887666553
No 387
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.41 E-value=3e-05 Score=74.39 Aligned_cols=285 Identities=10% Similarity=0.039 Sum_probs=158.1
Q ss_pred ChhHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHHHHHhccCCCE--EEEeCCCchhHHHHHHHhCC--CccCeeE
Q 013079 98 NPTVLNLSRQMAALEGTE---AAYCTASDKAGMSAISSVLMQLCSSGGH--VVAARTLYGGTHALLTHFFP--RACNITT 170 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~---~~~~tsg~~~gt~ai~~al~~l~~~gd~--Vi~~~~~y~~~~~~~~~~~~--~~~g~~v 170 (450)
...+.++++.+.++++.. .++|..|+ +|....++...|+..+.. |.+-..+-.+....- .+.. .......
T Consensus 49 ~~v~~~a~~~lreLl~iPd~Y~VlflqGG--at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~-~~~~~~~~~~~~~ 125 (365)
T COG1932 49 KNVLEEAEKDLRELLNIPDDYKVLFLQGG--ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAK-KVGKQPKLIDARI 125 (365)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCc--cHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHH-Hhcccccccccce
Confidence 345788899999999864 36666651 677788888888765443 555544444333321 2211 0000110
Q ss_pred E---EeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccC-HHHHHHHHHhcCCEEEEeCCCCCCCCCccCC-CCeEEEe
Q 013079 171 T---FVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVAN-IPELSRLAHDKGVTVVVDNTFSPLVLSPARL-GADVVVH 245 (450)
Q Consensus 171 ~---~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~-l~~I~~la~~~gi~livD~~~~~~~~~~~~~-g~di~~~ 245 (450)
. +-...+++.+. + .++...|++++-..-+|.-.+ ...+. .+.++|+|.+- .+.-.+.++ ..|++..
T Consensus 126 ~~~~~~~iP~~~~~~--~-~~~~ayv~~~~NeTi~Gv~v~~~p~~~-----~~~~~v~D~SS-~ilsr~iDvsk~dviya 196 (365)
T COG1932 126 EEAGYGSIPDLSKWD--F-SDNDAYVHFCWNETISGVEVPELPDIG-----SDGLLVADASS-AILSRPIDVSKYDVIYA 196 (365)
T ss_pred eccCccCCCChhhcc--c-CCCccEEEEecCCcccceEccCCCCCC-----CCceEEEeccc-HHhcCCCChhHcceEEE
Confidence 0 11112444333 3 344444666543334454433 22221 12789999874 222222222 4689999
Q ss_pred CCCCccccCccceEEEEEcCHHHHHHHHHH--------hhhhh-hccCCCchHHHHHHHHccCCc------HHHHHHHHH
Q 013079 246 SISKFISGGADIIAGAVCGPANLVNSMMDL--------HQGAL-MLLGPTMNPKVAFELSERIPH------LGLRMKEHC 310 (450)
Q Consensus 246 S~sK~~g~~g~~igG~l~~~~~~~~~l~~~--------~~~~~-~~~g~~~~~~~a~~~~~~~~~------l~~~~~~~~ 310 (450)
+..|.+|+.| + ++++.++++++++... ..+.. ...-++++..+.+.....++| ++...++..
T Consensus 197 gaQKnlGpaG--l-tvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~ 273 (365)
T COG1932 197 GAQKNLGPAG--L-TVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQ 273 (365)
T ss_pred ehhhccCccc--e-EEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999988 5 8888888888776432 11100 012244544444444333343 445556678
Q ss_pred HHHHHHHHHHHhCCCe--eeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccccc
Q 013079 311 HRALIFARRMKKLGLK--VLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLGYY 388 (450)
Q Consensus 311 ~~~~~l~~~L~~~~~~--v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G~~ 388 (450)
++++.|-+.+.+.++- ...+. .+ .-..++|.+.+.+....|+..+...+ +..-.| .
T Consensus 274 ~ka~~LY~~id~s~fy~~~v~~~-~R----------------S~mnV~f~~~~~~ld~~fv~eae~~g----l~~lkG-h 331 (365)
T COG1932 274 AKAQLLYDWIDKSDFYRNLVAKA-NR----------------SRMNVTFTLVDAELDKGFVAEAEAAG----LIYLKG-H 331 (365)
T ss_pred HHHHHHHHHHHhCCccccccchh-hc----------------cceeEEEEcCcHHHHHHHHHHHHHcC----Cceecc-c
Confidence 8888899999887651 11111 11 11258888887766678888877533 111111 1
Q ss_pred cccccccccccCCCCCHHHHHhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhh
Q 013079 389 ETLMSCSGSSTSSELNAEEKALAGISAGLVRMSVGYLGTLDQRWSQFEKALSRMQD 444 (450)
Q Consensus 389 ~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~ 444 (450)
. ..+-+|+|++ -.-.-+.++.|...++.+.+
T Consensus 332 ------r------------------~vgGmRasiy-nA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 332 ------R------------------SVGGLRASIY-NAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred ------c------------------CCCceeeeee-cCCCHHHHHHHHHHHHHHHH
Confidence 0 0244999999 75566667777777766543
No 388
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.32 E-value=3.7e-05 Score=72.99 Aligned_cols=176 Identities=18% Similarity=0.193 Sum_probs=98.2
Q ss_pred HHHHHHhhhc-----CCceEEEEecCCCCccccc----CHHHHHHHHHhcCCEEEEeCCCCCCCC--C-------ccCCC
Q 013079 178 HEMVNSAIVQ-----GRTKVLYFESISNPTLAVA----NIPELSRLAHDKGVTVVVDNTFSPLVL--S-------PARLG 239 (450)
Q Consensus 178 ~~~l~~ai~~-----~~t~lv~i~~~~NptG~v~----~l~~I~~la~~~gi~livD~~~~~~~~--~-------~~~~g 239 (450)
++++++.|.+ ..+.+++||..+.+.|.-. -.++|.+++++||+.+|+||+|++... . .++..
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 5666666621 2467899999999988763 288999999999999999999944321 1 12235
Q ss_pred CeEEEeCCCCccccCccceEEEEEcCHHHHH--HHHHHhhhhhhccCCCchHHHHHHHHccCCcHHHHHHHHHHHHHHHH
Q 013079 240 ADVVVHSISKFISGGADIIAGAVCGPANLVN--SMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCHRALIFA 317 (450)
Q Consensus 240 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~--~l~~~~~~~~~~~g~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~l~ 317 (450)
+|+|+ |||=+-. ||+... ++++. +.+-+.. ..|-..-...+..+.+.+.. +..+.....-.+.|.
T Consensus 335 pD~vT--FSKK~q~-----gGffh~-~~frpn~pYrifNT----WmGdP~k~lll~~vv~~I~~-~~Ll~n~~~vG~~l~ 401 (484)
T KOG1405|consen 335 PDVVT--FSKKFQT-----GGFFHD-EEFRPNEPYRIFNT----WMGDPSKNLLLEEVVQEIKR-EDLLNNVAHVGKALL 401 (484)
T ss_pred cccee--hhhhhhc-----CccccC-cccCCCchHHHhhh----hcCChHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHH
Confidence 78988 7787762 365432 22221 1111111 23322111111111111111 111222233334454
Q ss_pred HHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhccccccccccccc
Q 013079 318 RRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQNYAQFGFMAVSLG 386 (450)
Q Consensus 318 ~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~~~~~g~i~vs~G 386 (450)
..|.++.. .+|+.- +..+|.|.++.+++++......|+..++. -++.+|
T Consensus 402 ~gL~~Lq~--~~p~~~------------~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~------nGv~~G 450 (484)
T KOG1405|consen 402 KGLLELQA--KYPGKI------------NNLRGRGTFIAWDCPSGSIRDKLILIARL------NGVNLG 450 (484)
T ss_pred HHHHHHHH--hCchhh------------hcccccceEEEEeCCChHHHHHHHHHHHH------cCceec
Confidence 45443321 234311 12347899999999988777888888876 355665
No 389
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.22 E-value=3.8e-05 Score=72.76 Aligned_cols=226 Identities=13% Similarity=0.158 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHh--ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE---eCCC----CHHHHHHhhhc-CCceEEEE
Q 013079 126 GMSAISSVLMQL--CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF---VDIS----DHEMVNSAIVQ-GRTKVLYF 195 (450)
Q Consensus 126 gt~ai~~al~~l--~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~---v~~~----d~~~l~~ai~~-~~t~lv~i 195 (450)
||.|+..+..-+ .-++..|.+++|+|+.....+. ..|+.+.+ .+.. |.+.+.+.+.. +.-..|++
T Consensus 129 GTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~-----~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilL 203 (427)
T KOG1411|consen 129 GTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFK-----DAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILL 203 (427)
T ss_pred CcchhhHHHHHHHhhccccceeecCCcccccCcccc-----ccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEe
Confidence 777766655433 3467889999999998776664 25655533 3322 55554444411 12223333
Q ss_pred -ecCCCCccccc---CHHHHHHHHHhcCCEEEEeCCCCCCCC-Ccc----------CC-CCeEEEeCCCCccccCccceE
Q 013079 196 -ESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTFSPLVL-SPA----------RL-GADVVVHSISKFISGGADIIA 259 (450)
Q Consensus 196 -~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~~~~~~-~~~----------~~-g~di~~~S~sK~~g~~g~~ig 259 (450)
...+||||.-. ..++|.++.++.+.+-+.|-+|.++.. +.. +- +.-+++.|+.|.+|.-|.|+
T Consensus 204 haCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERv- 282 (427)
T KOG1411|consen 204 HACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERV- 282 (427)
T ss_pred ehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhcc-
Confidence 35799999764 577999999999999999999855532 111 11 34588999999999999998
Q ss_pred EEE---EcCHHHHHHHH----HHhhhhhhccCCCchHHHHHHHHccCC-------cHHHHHHHHHHHHHHHHHHHHhCCC
Q 013079 260 GAV---CGPANLVNSMM----DLHQGALMLLGPTMNPKVAFELSERIP-------HLGLRMKEHCHRALIFARRMKKLGL 325 (450)
Q Consensus 260 G~l---~~~~~~~~~l~----~~~~~~~~~~g~~~~~~~a~~~~~~~~-------~l~~~~~~~~~~~~~l~~~L~~~~~ 325 (450)
|.+ +.+.+...++. ...++. ...++......+...+...+ ++.....++...|+.|.+.|+..+.
T Consensus 283 Ga~svvc~~ad~A~rV~SQlk~liRpm-YSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs 361 (427)
T KOG1411|consen 283 GALSVVCKDADEAKRVESQLKILIRPM-YSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGS 361 (427)
T ss_pred ceeEEEecCHHHHHHHHHHHHHHhccc-ccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCC
Confidence 554 34455444432 222211 12333333333333333221 1222334455556666666654332
Q ss_pred eeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhhc
Q 013079 326 KVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQN 374 (450)
Q Consensus 326 ~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~~ 374 (450)
|. ...+..+ .=||++|.--++++.+.+..+..+
T Consensus 362 ----~~-----~W~hI~~-------QIGMF~fTgl~peQv~~l~ke~~i 394 (427)
T KOG1411|consen 362 ----PG-----NWSHITK-------QIGMFCFTGLNPEQVDWLTKEYHI 394 (427)
T ss_pred ----Cc-----cHHHHHH-------hhheeeecCCCHHHHHHHHhhhee
Confidence 11 1111111 123888886678777777766553
No 390
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.07 E-value=0.00022 Score=72.80 Aligned_cols=217 Identities=15% Similarity=0.127 Sum_probs=132.2
Q ss_pred ChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHH---HHhc-cCCC----EEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 98 NPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVL---MQLC-SSGG----HVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al---~~l~-~~gd----~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
.....+|++.++++.|-+.+.|-+++ |.++-.+.+ ++.. ..|+ .-+++...|+.....+. +.|.+
T Consensus 581 ~~lf~~Le~~Lc~iTG~D~~s~QPNs--GA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~-----Magmk 653 (1001)
T KOG2040|consen 581 QQLFTELEKDLCEITGFDSFSLQPNS--GAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAA-----MAGMK 653 (1001)
T ss_pred HHHHHHHHHHhheeecccceeecCCC--CcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHH-----hcCCE
Confidence 35678999999999999988665432 555545444 4443 2332 23455556655444443 46888
Q ss_pred EEEeCCC-----CHHHHHHhhhc--CCceEEEEecCCCCcccc-cCHHHHHHHHHhcCCEEEEeCCC--CCC-CCCccCC
Q 013079 170 TTFVDIS-----DHEMVNSAIVQ--GRTKVLYFESISNPTLAV-ANIPELSRLAHDKGVTVVVDNTF--SPL-VLSPARL 238 (450)
Q Consensus 170 v~~v~~~-----d~~~l~~ai~~--~~t~lv~i~~~~NptG~v-~~l~~I~~la~~~gi~livD~~~--~~~-~~~~~~~ 238 (450)
++.|..+ |..+|++...+ ++-.++.|..|+. .|.. ..+++++++.++||-.+..|.+- ..+ ..+|-++
T Consensus 654 vvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~ 732 (1001)
T KOG2040|consen 654 VVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDI 732 (1001)
T ss_pred EEEeeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccc
Confidence 8887765 77888776632 4567888888864 4555 56999999999999999999874 222 2578889
Q ss_pred CCeEEEeCCCCccccC---ccc-eEEEEEcCHHHHHHHHH------Hhhhhh--------hccCCC--chHHHHHHHHcc
Q 013079 239 GADVVVHSISKFISGG---ADI-IAGAVCGPANLVNSMMD------LHQGAL--------MLLGPT--MNPKVAFELSER 298 (450)
Q Consensus 239 g~di~~~S~sK~~g~~---g~~-igG~l~~~~~~~~~l~~------~~~~~~--------~~~g~~--~~~~~a~~~~~~ 298 (450)
|+|+.-.-+||.|..| |.+ + |=+..++.+..-+-. .+.+.. ..+|+. +..-.++....+
T Consensus 733 GaDV~HLNLHKTFcIPHGGGGPg~-gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG 811 (1001)
T KOG2040|consen 733 GADVCHLNLHKTFCIPHGGGGPGM-GPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMG 811 (1001)
T ss_pred cccceeecccceeeecCCCCCCCC-CccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhc
Confidence 9999999999998633 111 2 334333333221100 000000 012222 112233333334
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHhC
Q 013079 299 IPHLGLRMKEHCHRALIFARRMKKL 323 (450)
Q Consensus 299 ~~~l~~~~~~~~~~~~~l~~~L~~~ 323 (450)
...+....+-..-++.++.++|+.+
T Consensus 812 ~~GL~~as~~AiLNaNYMakRLe~h 836 (1001)
T KOG2040|consen 812 SGGLKDASKIAILNANYMAKRLESH 836 (1001)
T ss_pred ccccchhhHHHhhhhHHHHHHHhhc
Confidence 4555555555566788999999875
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.92 E-value=0.0033 Score=64.44 Aligned_cols=138 Identities=19% Similarity=0.219 Sum_probs=90.8
Q ss_pred HHHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHH
Q 013079 103 NLSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHE 179 (450)
Q Consensus 103 ~l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~ 179 (450)
..+..|+++.|-+ ++-+.-- ||+|-.+...+. ..++.++++...+|+.+...++.... .+|++++.. |++
T Consensus 167 NyQTmi~dlTGL~~aNASLLDE---gTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~-~~~i~v~~~---~~~ 239 (1001)
T KOG2040|consen 167 NYQTMITDLTGLPMANASLLDE---GTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAK-GFGIKVVVS---DIK 239 (1001)
T ss_pred hhHHhhhhccCCcccchhhhcc---chhHHHHHHHHHhhcccceEEecCCCCcchhhhhhcccc-ccceeEEec---CHH
Confidence 4455666776643 2323333 555555444332 34556799999999999988854333 367765443 444
Q ss_pred HHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEEeCCCCc
Q 013079 180 MVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVVHSISKF 250 (450)
Q Consensus 180 ~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~~S~sK~ 250 (450)
+... . ..+...|++..|.. -|.+.|..++++.++..|.++++-.-. --+...|.++|+|++++|...+
T Consensus 240 ~~~~-s-~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 240 EADY-S-SKDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred Hhhc-c-ccceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 4332 2 35678899998865 589999999999999999887653222 2234578889999999998775
No 392
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.12 E-value=0.0012 Score=57.11 Aligned_cols=51 Identities=14% Similarity=0.238 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHhC------CCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchh
Q 013079 100 TVLNLSRQMAALEG------TEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGG 153 (450)
Q Consensus 100 ~~~~l~~~iA~l~g------~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~ 153 (450)
.++.+.+.+.+..| .+++++|+| +++|+.+++.+++++||.|+++.|.|++
T Consensus 97 lR~AiA~~l~~~~g~~v~~~pd~Ivvt~G---a~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 97 FRKAIANFMAEARGGRVKFDADMIVLSAG---ATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHhCCCCccchhheEEcCC---HHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 33444444444434 246899999 9999999999999999999999999974
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.03 E-value=0.01 Score=54.62 Aligned_cols=166 Identities=14% Similarity=0.214 Sum_probs=94.5
Q ss_pred HHHHHHHHHHhCC---CeEEEecChHHHHHHHHHHHHHhc--cCC-CEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCC
Q 013079 102 LNLSRQMAALEGT---EAAYCTASDKAGMSAISSVLMQLC--SSG-GHVVAARTLYGGTHALLTHFFPRACNITTTFVDI 175 (450)
Q Consensus 102 ~~l~~~iA~l~g~---~~~~~tsg~~~gt~ai~~al~~l~--~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~ 175 (450)
+++...+-.+.|. ..+++++= -+| .++.+++..+. +|. .-|+-.+..-.+....+- ..|++...+..
T Consensus 60 ne~a~~~i~l~glhav~nc~vvpl-~tg-mslslc~~s~r~krpkakyiiw~ridqks~~ksi~-----~agfepiiie~ 132 (432)
T KOG3843|consen 60 NEFAKDAIHLAGLHAVANCFVVPL-ATG-MSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSII-----HAGFEPIIIEN 132 (432)
T ss_pred HHHHHHHHHHhhhhhhhceeEEec-ccc-ccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHH-----hcCCCceeeec
Confidence 4444444455553 34444432 003 34566666653 333 345556665555544432 14665554432
Q ss_pred ----C----CHHHHHHhhhcCCce-EEEEecCCC-Ccccc-cCHHHHHHHHHhcCCEEEEeCCCCCCCC-------CccC
Q 013079 176 ----S----DHEMVNSAIVQGRTK-VLYFESISN-PTLAV-ANIPELSRLAHDKGVTVVVDNTFSPLVL-------SPAR 237 (450)
Q Consensus 176 ----~----d~~~l~~ai~~~~t~-lv~i~~~~N-ptG~v-~~l~~I~~la~~~gi~livD~~~~~~~~-------~~~~ 237 (450)
+ |++.+++.++..... .+++.+..+ -.-.. ..+++|+.+|..|+++-+|.++|+--.. ...+
T Consensus 133 i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~ 212 (432)
T KOG3843|consen 133 ILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAE 212 (432)
T ss_pred cccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhh
Confidence 1 778888777432333 333322111 11122 3499999999999999999999843211 1112
Q ss_pred C-CCeEEEeCCCCccccCccceEEEEEc--CHHHHHHHHHHhh
Q 013079 238 L-GADVVVHSISKFISGGADIIAGAVCG--PANLVNSMMDLHQ 277 (450)
Q Consensus 238 ~-g~di~~~S~sK~~g~~g~~igG~l~~--~~~~~~~l~~~~~ 277 (450)
. .+|.++.|+-|.|-.| +||+++. ++.+++.+.+...
T Consensus 213 ~grida~vqsldknf~vp---vggaiia~fk~n~iq~iak~yp 252 (432)
T KOG3843|consen 213 CGRIDAFVQSLDKNFMVP---VGGAIIAAFKDNFIQEIAKMYP 252 (432)
T ss_pred hccHHHHHHHhhhcceee---cchhHhhHhHHHHHHHHHHhCC
Confidence 2 3689999999999876 5788754 4567777766544
No 394
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=96.95 E-value=0.0067 Score=57.00 Aligned_cols=158 Identities=15% Similarity=0.176 Sum_probs=108.7
Q ss_pred HHHHHHHHhCCC--eEEEecChHHHHHHHHHHHHHhccCC---CEEEEeCCCchhHHHHHHHhCCCccCeeE----EEeC
Q 013079 104 LSRQMAALEGTE--AAYCTASDKAGMSAISSVLMQLCSSG---GHVVAARTLYGGTHALLTHFFPRACNITT----TFVD 174 (450)
Q Consensus 104 l~~~iA~l~g~~--~~~~tsg~~~gt~ai~~al~~l~~~g---d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v----~~v~ 174 (450)
.-..++.+.|+. .+-+.++ -|.-++..+.++.+|- -+|+...-.|++-+.++...++ +.|+.+ +.+.
T Consensus 116 il~l~~~iVGA~e~EvavmNs---LTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~-lhG~~~e~sm~~ie 191 (465)
T KOG3846|consen 116 ILPLLAPIVGAQENEVAVMNS---LTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCK-LHGISPENSMIQIE 191 (465)
T ss_pred hhhhhhhhccCCchhhhhHhh---hhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhh-hcCCChHHheEEec
Confidence 344566777774 3566777 7777888888887764 3688888777776555543332 245432 1222
Q ss_pred CC------CHHHHHHhhhc--CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC--CCCCCCccCCCCeEEE
Q 013079 175 IS------DHEMVNSAIVQ--GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF--SPLVLSPARLGADVVV 244 (450)
Q Consensus 175 ~~------d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~--~~~~~~~~~~g~di~~ 244 (450)
+. ..+++.+.|+. +..++|++..++.-||...++.+|...-+..|+++-.|-++ +.+....-++|+|+.+
T Consensus 192 PREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFAC 271 (465)
T KOG3846|consen 192 PREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFAC 271 (465)
T ss_pred ccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEE
Confidence 11 34555555532 45678889999999999999999997767789999999886 5555555677999999
Q ss_pred eCCCCccccCccceEEEEEcC
Q 013079 245 HSISKFISGGADIIAGAVCGP 265 (450)
Q Consensus 245 ~S~sK~~g~~g~~igG~l~~~ 265 (450)
....|++....+-|||..+-.
T Consensus 272 WCSYKYlnaGaGgIgGlFvHe 292 (465)
T KOG3846|consen 272 WCSYKYLNAGAGGIGGLFVHE 292 (465)
T ss_pred EeeecccccCCCccceeeeeh
Confidence 999999875444477776643
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=95.25 E-value=1 Score=42.39 Aligned_cols=244 Identities=14% Similarity=0.132 Sum_probs=122.7
Q ss_pred ChhHHHHHHHHHHHhCCCe---EEEecChHHHHHHHHHHHHHhc--cCC---CEEEEeCCCchhHHHHHHHhCCCccCee
Q 013079 98 NPTVLNLSRQMAALEGTEA---AYCTASDKAGMSAISSVLMQLC--SSG---GHVVAARTLYGGTHALLTHFFPRACNIT 169 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~---~~~tsg~~~gt~ai~~al~~l~--~~g---d~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 169 (450)
...++..+..+.++++... ++|.-|+ ||.-..++...++ +.| |-|++-..+-.+..+.-+ +|..
T Consensus 51 ~kii~~tes~lreLlniPdn~~vlf~QGG--Gt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk------~~~~ 122 (370)
T KOG2790|consen 51 AKIINDTESLLRELLNIPDNYKVLFLQGG--GTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKK------YGTP 122 (370)
T ss_pred HHHHHHHHHHHHHHHcCCCceeEEEEeCC--CcccccccchhhhccccCCccceEEeccccHHHHHHHHh------hCCc
Confidence 3567888888888988543 4555431 6665555555554 444 567777665555544432 2211
Q ss_pred -E--------EEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCccCC-C
Q 013079 170 -T--------TFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSPARL-G 239 (450)
Q Consensus 170 -v--------~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~~~~-g 239 (450)
. .|-.++|.+.++. +++.+.|+.|. |+|-.-.....+- +-.-+|.++|+|-. +.+.-.|.+. .
T Consensus 123 ~~V~~~~k~y~ygkvPd~~~w~~---~~da~yvyyCa--NETVHGVEf~~~P-~~~~~~~vlVaDmS-SnflSrpvDvsk 195 (370)
T KOG2790|consen 123 NIVIPKLKSYTYGKVPDPSTWEL---NPDASYVYYCA--NETVHGVEFDFIP-VNDPKGAVLVADMS-SNFLSRPVDVSK 195 (370)
T ss_pred eEEeccccccccCcCCChhhccc---CCCccEEEEec--CceeeceecCCCC-CCCCCCceEEEecc-cchhcCCccchh
Confidence 1 1112347776654 55677777753 4442211111111 12346889999965 3333333333 2
Q ss_pred CeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHhh-----------hhhhccCCCchHHHHHHHHccC---CcHHHH
Q 013079 240 ADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLHQ-----------GALMLLGPTMNPKVAFELSERI---PHLGLR 305 (450)
Q Consensus 240 ~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~~-----------~~~~~~g~~~~~~~a~~~~~~~---~~l~~~ 305 (450)
.+++.....|.+|+.|.. .++.+++++........ .....+.++......-+.+..+ -.+...
T Consensus 196 ~gvi~aGAQKN~G~aG~T---vvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~ 272 (370)
T KOG2790|consen 196 FGVIFAGAQKNVGPAGVT---VVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAM 272 (370)
T ss_pred cceEEeccccccCccccE---EEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHH
Confidence 457788899999998843 34555566543322110 0111222222222222222211 112222
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeeCCCCCCCchhHHHHHHhccCCCcCcEEEEEeCCHHHHHHHHHHhh
Q 013079 306 MKEHCHRALIFARRMKKLGLKVLYPGLEDHPHHELLKSMANKEYGFGGLLCLDMETEEKANRLMNYLQ 373 (450)
Q Consensus 306 ~~~~~~~~~~l~~~L~~~~~~v~~p~~~~~p~~~l~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~l~ 373 (450)
.+...+....+-+.+.+...-...|-.+. .++. ..+.|++...+.-.+|+....
T Consensus 273 e~~n~~KskllYd~iD~s~gfy~cpVe~~------~RS~--------MNV~Fri~~d~Le~eFLkeA~ 326 (370)
T KOG2790|consen 273 EKLNQEKSKLLYDAIDNSNGFYRCPVEPS------VRSR--------MNVPFRIEKDELEAEFLKEAA 326 (370)
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEcccchh------hhhh--------cccceeecchHHHHHHHHHHH
Confidence 23345566778888877633223333221 1111 147788876655567776554
No 396
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=73.87 E-value=26 Score=32.08 Aligned_cols=57 Identities=16% Similarity=0.156 Sum_probs=37.9
Q ss_pred cCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 166 CNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 166 ~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
.|+++...+.+|.+.|.+++ + ....|++..+........-...+++.|++.|+..++
T Consensus 43 ~g~~vv~~d~~~~~~l~~al-~-g~d~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 43 LGAEVVEADYDDPESLVAAL-K-GVDAVFSVTPPSHPSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp TTTEEEES-TT-HHHHHHHH-T-TCSEEEEESSCSCCCHHHHHHHHHHHHHHHT-SEEE
T ss_pred ccceEeecccCCHHHHHHHH-c-CCceEEeecCcchhhhhhhhhhHHHhhhccccceEE
Confidence 58888888888999999999 5 444555554433333444566889999998876554
No 397
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=72.07 E-value=52 Score=29.63 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=27.4
Q ss_pred HHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 180 MVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 180 ~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
.++... +++--++.+.+ +|...++.++++++|++|+.+|.
T Consensus 102 ql~~~~-~~gDvli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 102 QVRALG-HAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHcC-CCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEE
Confidence 344333 44444455433 57778899999999999999886
No 398
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=65.31 E-value=67 Score=28.90 Aligned_cols=80 Identities=14% Similarity=0.186 Sum_probs=50.4
Q ss_pred CEEEEeCC--CchhH-HHHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHh
Q 013079 142 GHVVAART--LYGGT-HALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHD 217 (450)
Q Consensus 142 d~Vi~~~~--~y~~~-~~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~ 217 (450)
.+|++..+ +.|.. ...+..++.. .|+++.++..+ .++++.+++...++.+|.+...... ....+.++.+.+++
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~-~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~--~~~~~~~~i~~lr~ 159 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEA-NGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTT--TMGGMKEVIEALKE 159 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccc--cHHHHHHHHHHHHH
Confidence 45554332 33433 3334455554 79999887655 6788888876678888887654332 35667888888877
Q ss_pred c----CCEEEE
Q 013079 218 K----GVTVVV 224 (450)
Q Consensus 218 ~----gi~liv 224 (450)
. ++.+++
T Consensus 160 ~~~~~~~~i~v 170 (201)
T cd02070 160 AGLRDKVKVMV 170 (201)
T ss_pred CCCCcCCeEEE
Confidence 5 345555
No 399
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=65.31 E-value=23 Score=28.61 Aligned_cols=68 Identities=16% Similarity=0.266 Sum_probs=46.2
Q ss_pred HHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc--CCEEEEeCCC
Q 013079 158 LTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTF 228 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~ 228 (450)
+..++++ .|.++..++.. +.+++.+.+.+.++.+|.+.... +.......++++..|+. ++.+++=..+
T Consensus 20 la~~l~~-~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~ 90 (121)
T PF02310_consen 20 LAAYLRK-AGHEVDILDANVPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPH 90 (121)
T ss_dssp HHHHHHH-TTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESS
T ss_pred HHHHHHH-CCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence 3445554 69999998766 56888777756788888876542 33445667888888776 7788875543
No 400
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=63.90 E-value=69 Score=30.99 Aligned_cols=103 Identities=19% Similarity=0.168 Sum_probs=53.9
Q ss_pred hCCCeEEEecChHHHHHHHHHHHHHhccCCC--EEEE--eCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhc
Q 013079 112 EGTEAAYCTASDKAGMSAISSVLMQLCSSGG--HVVA--ARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ 187 (450)
Q Consensus 112 ~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd--~Vi~--~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~ 187 (450)
+.....++|-| -+......+..+.+.|. +|++ ++|.+.+ ...+..+ .+ .|++++++... .+...+ .
T Consensus 113 i~~g~~ILT~~---~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~~~a~~L-~~-~gI~vtlI~Ds---a~~~~m-~ 182 (301)
T TIGR00511 113 IRDGDVVMTHC---NSEAALSVIKTAFEQGKDIEVIATETRPRKQG-HITAKEL-RD-YGIPVTLIVDS---AVRYFM-K 182 (301)
T ss_pred cCCCCEEEEEC---CcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-HHHHHHH-HH-CCCCEEEEehh---HHHHHH-H
Confidence 33344677766 44444444444444443 4554 4466666 4444333 33 69999997532 333334 2
Q ss_pred CCceEEEEe-cCCCCcccccC---HHHHHHHHHhcCCEEEEe
Q 013079 188 GRTKVLYFE-SISNPTLAVAN---IPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 188 ~~t~lv~i~-~~~NptG~v~~---l~~I~~la~~~gi~livD 225 (450)
+...|++- ..--..|.+.. -.-++-.|+.++++|+|=
T Consensus 183 -~vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 183 -EVDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred -hCCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 34444442 11122343322 336777889999998863
No 401
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=63.10 E-value=63 Score=31.38 Aligned_cols=104 Identities=21% Similarity=0.183 Sum_probs=54.9
Q ss_pred HhCCCeEEEecChHHHHHHHHHHHHHhccCCC--EEEE--eCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhh
Q 013079 111 LEGTEAAYCTASDKAGMSAISSVLMQLCSSGG--HVVA--ARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIV 186 (450)
Q Consensus 111 l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd--~Vi~--~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~ 186 (450)
++.....++|-| -+......|....+.|. +|++ ++|...+ ...+..+ .+ .|++++++... .+-..+
T Consensus 117 ~i~~g~~ILT~~---~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~~~a~~L-~~-~GI~vtlI~Ds---av~~~m- 186 (310)
T PRK08535 117 RIRDGDVIMTHC---NSSAALSVIKTAHEQGKDIEVIATETRPRNQG-HITAKEL-AE-YGIPVTLIVDS---AVRYFM- 186 (310)
T ss_pred HcCCCCEEEEeC---CcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-HHHHHHH-HH-CCCCEEEEehh---HHHHHH-
Confidence 333344677766 44444444554444443 4554 3466565 3344333 33 69999987633 333333
Q ss_pred cCCceEEEEe-cCCCCcccccC---HHHHHHHHHhcCCEEEEe
Q 013079 187 QGRTKVLYFE-SISNPTLAVAN---IPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 187 ~~~t~lv~i~-~~~NptG~v~~---l~~I~~la~~~gi~livD 225 (450)
+++..|++- ..--..|.+.. -.-++-+||.++++|++=
T Consensus 187 -~~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 187 -KDVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred -HhCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 234455542 11123344432 346777889999998863
No 402
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=61.98 E-value=36 Score=27.51 Aligned_cols=64 Identities=9% Similarity=0.131 Sum_probs=41.6
Q ss_pred HHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc---CCEEEE
Q 013079 158 LTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK---GVTVVV 224 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~---gi~liv 224 (450)
+..++.. .|+++.++... .++++.+.+.+.++.+|.++... +-....+.++.+.+++. ++.+++
T Consensus 19 ~~~~l~~-~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~v 86 (119)
T cd02067 19 VARALRD-AGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLV 86 (119)
T ss_pred HHHHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEE
Confidence 3345554 79999887654 56777776656788888875432 22446677888888876 344444
No 403
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=60.51 E-value=67 Score=27.04 Aligned_cols=59 Identities=10% Similarity=0.143 Sum_probs=41.2
Q ss_pred HHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcC
Q 013079 158 LTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKG 219 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~g 219 (450)
+..+++. .|+++.++-.+ .++++.+++...++.+|.+...+. .....++++.+.+++.+
T Consensus 23 v~~~lr~-~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~~ 82 (137)
T PRK02261 23 LDRALTE-AGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEAG 82 (137)
T ss_pred HHHHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhcC
Confidence 3344444 79999998765 678887777577888988865544 24456677777777763
No 404
>PLN02476 O-methyltransferase
Probab=60.43 E-value=1.1e+02 Score=29.13 Aligned_cols=122 Identities=16% Similarity=0.209 Sum_probs=70.7
Q ss_pred CChhHHHHHHHHHHHhCCCeE--EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCee--EEE
Q 013079 97 FNPTVLNLSRQMAALEGTEAA--YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNIT--TTF 172 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~--~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~--v~~ 172 (450)
..+...++...++++.++..+ +-|.. |..++.++. + +.++.+|++.+..-.. ...++..+.+ .|+. +..
T Consensus 102 v~~~~g~lL~~L~~~~~ak~VLEIGT~t---GySal~lA~-a-l~~~G~V~TiE~d~e~-~~~Ar~n~~~-aGl~~~I~l 174 (278)
T PLN02476 102 VSPDQAQLLAMLVQILGAERCIEVGVYT---GYSSLAVAL-V-LPESGCLVACERDSNS-LEVAKRYYEL-AGVSHKVNV 174 (278)
T ss_pred cCHHHHHHHHHHHHhcCCCeEEEecCCC---CHHHHHHHH-h-CCCCCEEEEEECCHHH-HHHHHHHHHH-cCCCCcEEE
Confidence 356677888889999998876 67777 888887654 2 3445567766554332 2333333333 4543 444
Q ss_pred eCCCCHHHHHHhhh---cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC
Q 013079 173 VDISDHEMVNSAIV---QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 173 v~~~d~~~l~~ai~---~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 228 (450)
+..+-.+.|.+... .....+|+|... ......-++.+.++.+. |-.+++|++.
T Consensus 175 i~GdA~e~L~~l~~~~~~~~FD~VFIDa~--K~~Y~~y~e~~l~lL~~-GGvIV~DNvL 230 (278)
T PLN02476 175 KHGLAAESLKSMIQNGEGSSYDFAFVDAD--KRMYQDYFELLLQLVRV-GGVIVMDNVL 230 (278)
T ss_pred EEcCHHHHHHHHHhcccCCCCCEEEECCC--HHHHHHHHHHHHHhcCC-CcEEEEecCc
Confidence 43333344444321 134678998654 22223335555555544 6678899985
No 405
>PRK05638 threonine synthase; Validated
Probab=57.09 E-value=85 Score=32.18 Aligned_cols=84 Identities=15% Similarity=0.014 Sum_probs=46.1
Q ss_pred hhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc-cCCCEEEEeCCCchhHHHH
Q 013079 79 MFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC-SSGGHVVAARTLYGGTHAL 157 (450)
Q Consensus 79 ~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~-~~gd~Vi~~~~~y~~~~~~ 157 (450)
+++.++-||.++|.. |.+...+..+. ..|.+.++..|+ |-.+..+|..+-. .-.-.|+++...-..-...
T Consensus 83 ~~K~E~~nPtGSfKd-R~a~~~i~~a~-----~~g~~~vv~aSs---GN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~ 153 (442)
T PRK05638 83 YIKDETRNPTGSFRD-RLATVAVSYGL-----PYAANGFIVASD---GNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQ 153 (442)
T ss_pred EEEeCCCCCCCChHH-HHHHHHHHHHH-----HcCCCEEEEeCC---ChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHH
Confidence 346677788766533 33222222221 136667777777 8888877775432 2223555665433333333
Q ss_pred HHHhCCCccCeeEEEeCCC
Q 013079 158 LTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~ 176 (450)
+. .+|.++..++.+
T Consensus 154 ~~-----~~GA~vi~v~~~ 167 (442)
T PRK05638 154 MI-----AFGAKIIRYGES 167 (442)
T ss_pred HH-----hcCcEEEEECCC
Confidence 32 379999988754
No 406
>PRK08329 threonine synthase; Validated
Probab=54.47 E-value=68 Score=31.69 Aligned_cols=84 Identities=24% Similarity=0.197 Sum_probs=45.5
Q ss_pred hhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc-cCCCEEEEeCCCchhHHHH
Q 013079 79 MFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC-SSGGHVVAARTLYGGTHAL 157 (450)
Q Consensus 79 ~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~-~~gd~Vi~~~~~y~~~~~~ 157 (450)
+++.++-||.++|.. |.....+..+.+ .|.+.++..|+ |-.+..++..+.. .-.-.|+++...-..-...
T Consensus 75 ~~K~E~~nPtGSfKd-Rga~~~i~~a~~-----~g~~~vv~aSs---GN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~ 145 (347)
T PRK08329 75 YFKLDYLQPTGSFKD-RGTYVTVAKLKE-----EGINEVVIDSS---GNAALSLALYSLSEGIKVHVFVSYNASKEKISL 145 (347)
T ss_pred EEEeCCCCCCcCCHH-HHHHHHHHHHHH-----cCCCEEEEECC---CcHHHHHHHHHHHcCCcEEEEECCCChHHHHHH
Confidence 345667788765532 222222222221 35667777777 8888777765432 2223555555432333333
Q ss_pred HHHhCCCccCeeEEEeCCC
Q 013079 158 LTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~ 176 (450)
++ .+|.++..++.+
T Consensus 146 ~~-----~~GA~v~~v~~~ 159 (347)
T PRK08329 146 LS-----RLGAELHFVEGD 159 (347)
T ss_pred HH-----HcCCEEEEECCC
Confidence 32 378899988764
No 407
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=54.30 E-value=1.8e+02 Score=27.20 Aligned_cols=121 Identities=13% Similarity=0.157 Sum_probs=70.4
Q ss_pred ChhHHHHHHHHHHHhCCCeE--EEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCe--eEEEe
Q 013079 98 NPTVLNLSRQMAALEGTEAA--YCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI--TTTFV 173 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~--~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~--~v~~v 173 (450)
.+..-++-..+++..++..+ +=|.. |..++.++. + +.++.+|++.+..- .....++..+.+ .|+ ++..+
T Consensus 64 ~~~~g~lL~~l~~~~~ak~iLEiGT~~---GySal~la~-a-l~~~g~v~tiE~~~-~~~~~Ar~~~~~-ag~~~~I~~~ 136 (247)
T PLN02589 64 SADEGQFLNMLLKLINAKNTMEIGVYT---GYSLLATAL-A-LPEDGKILAMDINR-ENYELGLPVIQK-AGVAHKIDFR 136 (247)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEeChh---hHHHHHHHh-h-CCCCCEEEEEeCCH-HHHHHHHHHHHH-CCCCCceEEE
Confidence 45667777888888888886 44555 777776553 2 34556788777643 233333333333 342 45554
Q ss_pred CCCCHHHHHHhhh----cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC
Q 013079 174 DISDHEMVNSAIV----QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 174 ~~~d~~~l~~ai~----~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 228 (450)
..+-.+-|.+... .....+|++..- .......++.+.++.+. |-++++|++.
T Consensus 137 ~G~a~e~L~~l~~~~~~~~~fD~iFiDad--K~~Y~~y~~~~l~ll~~-GGviv~DNvl 192 (247)
T PLN02589 137 EGPALPVLDQMIEDGKYHGTFDFIFVDAD--KDNYINYHKRLIDLVKV-GGVIGYDNTL 192 (247)
T ss_pred eccHHHHHHHHHhccccCCcccEEEecCC--HHHhHHHHHHHHHhcCC-CeEEEEcCCC
Confidence 4433444444331 135678998643 33344445565665554 6678999996
No 408
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=53.50 E-value=83 Score=24.81 Aligned_cols=49 Identities=16% Similarity=0.215 Sum_probs=32.6
Q ss_pred eEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 169 TTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 169 ~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
....++.+..+-+..++ ....+++++ ||...+-+++.++|++++++++.
T Consensus 42 ~lvIt~gdR~di~~~a~-~~~i~~iIl------tg~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 42 DLVITPGDREDIQLAAI-EAGIACIIL------TGGLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EEEEEETT-HHHHHHHC-CTTECEEEE------ETT----HHHHHHHHHHT-EEEE
T ss_pred eEEEEeCCcHHHHHHHH-HhCCCEEEE------eCCCCCCHHHHHHHHHCCCEEEE
Confidence 34444566777777777 667788887 46777889999999999998875
No 409
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=53.17 E-value=1.7e+02 Score=27.88 Aligned_cols=106 Identities=17% Similarity=0.122 Sum_probs=54.5
Q ss_pred HHHhCCCeEEEecChHHHHHHHHHHHHHhccCCC--EEEEe--CCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHh
Q 013079 109 AALEGTEAAYCTASDKAGMSAISSVLMQLCSSGG--HVVAA--RTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSA 184 (450)
Q Consensus 109 A~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd--~Vi~~--~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~a 184 (450)
++++.....++|-| -+.....++....+.|. +|++. +|.+.+..- ...+ .+ .|++++.+.......+
T Consensus 104 ~~~I~~g~~ILTh~---~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l-a~eL-~~-~GI~vtlI~Dsa~~~~--- 174 (275)
T PRK08335 104 SELIDDGDVIITHS---FSSAVLEILKTAKRKGKRFKVILTESAPDYEGLAL-ANEL-EF-LGIEFEVITDAQLGLF--- 174 (275)
T ss_pred HHHcCCCCEEEEEC---CcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHH-HHHH-HH-CCCCEEEEeccHHHHH---
Confidence 44444445677765 44334444444444454 55553 476666544 3233 33 6999988753333333
Q ss_pred hhcCCceEEEEec-CCCCccccc-C--HHHHHHHHHhcCCEEEEe
Q 013079 185 IVQGRTKVLYFES-ISNPTLAVA-N--IPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 185 i~~~~t~lv~i~~-~~NptG~v~-~--l~~I~~la~~~gi~livD 225 (450)
+ . +...|++-. ---..|.+. . ---++-+|+.+|++|++=
T Consensus 175 m-~-~vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV~ 217 (275)
T PRK08335 175 A-K-EATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYVA 217 (275)
T ss_pred H-H-hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEEE
Confidence 3 2 244444421 111223222 1 235777889999998873
No 410
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=51.03 E-value=15 Score=39.01 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=33.2
Q ss_pred cCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCC
Q 013079 197 SISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVL 233 (450)
Q Consensus 197 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~ 233 (450)
.|++.-|+-.+++++++-|+++||-||+|-|+.++.-
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~ 241 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPP 241 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCC
Confidence 5788889999999999999999999999999877753
No 411
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=49.85 E-value=70 Score=30.83 Aligned_cols=112 Identities=18% Similarity=0.206 Sum_probs=63.6
Q ss_pred CEE-EEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEE-Ee---cC----CCCccccc----CH
Q 013079 142 GHV-VAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLY-FE---SI----SNPTLAVA----NI 208 (450)
Q Consensus 142 d~V-i~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~-i~---~~----~NptG~v~----~l 208 (450)
++| .+...+|.+....+...... -.......|..|.+.+.+.+.+.++.+|+ +. ++ .+|.--++ --
T Consensus 27 ~~v~~~DkLTYAgn~~~l~~~~~~-~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT 105 (340)
T COG1088 27 DHVVNLDKLTYAGNLENLADVEDS-PRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGT 105 (340)
T ss_pred ceEEEEecccccCCHHHHHhhhcC-CCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHH
Confidence 444 46778898888777544332 22334444445888888888433454433 21 11 12211111 13
Q ss_pred HHHHHHHHhcCC---E--EEEeCCCCCCCCC-----------c---c---CCCCeEEEeCCCCccccC
Q 013079 209 PELSRLAHDKGV---T--VVVDNTFSPLVLS-----------P---A---RLGADVVVHSISKFISGG 254 (450)
Q Consensus 209 ~~I~~la~~~gi---~--livD~~~~~~~~~-----------~---~---~~g~di~~~S~sK~~g~~ 254 (450)
--|.+.++++.. . +=.||+|+.+..+ | . +...|+++.+..+.+|.+
T Consensus 106 ~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYglp 173 (340)
T COG1088 106 YTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLP 173 (340)
T ss_pred HHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCc
Confidence 367778888763 2 3379999665431 1 1 125688888888888876
No 412
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=48.85 E-value=64 Score=27.09 Aligned_cols=67 Identities=12% Similarity=0.196 Sum_probs=45.9
Q ss_pred chhHHHHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCC
Q 013079 151 YGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGV 220 (450)
Q Consensus 151 y~~~~~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi 220 (450)
|.--...+...+.. .|+++.++..+ .++++.++..+.+..+|.+++-+ +.+...++++.+.+++.|+
T Consensus 14 HdiGk~iv~~~l~~-~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 14 HAVGNKILDHAFTN-AGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred hhHhHHHHHHHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCCC
Confidence 33333344444444 79999998776 67777666657788888887654 3445568899999988764
No 413
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=48.22 E-value=82 Score=28.57 Aligned_cols=121 Identities=12% Similarity=0.169 Sum_probs=70.2
Q ss_pred ChhHHHHHHHHHHHhCCCeEE--EecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCe--eEEEe
Q 013079 98 NPTVLNLSRQMAALEGTEAAY--CTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNI--TTTFV 173 (450)
Q Consensus 98 ~~~~~~l~~~iA~l~g~~~~~--~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~--~v~~v 173 (450)
.+..-++-..+++..++..++ =|.. |.+++.++- + +.++.+|++.+..-. ....++..+.+ .|. ++..+
T Consensus 30 ~~~~g~lL~~l~~~~~~k~vLEIGt~~---GySal~la~-~-l~~~g~i~tiE~~~~-~~~~A~~~~~~-ag~~~~I~~~ 102 (205)
T PF01596_consen 30 SPETGQLLQMLVRLTRPKRVLEIGTFT---GYSALWLAE-A-LPEDGKITTIEIDPE-RAEIARENFRK-AGLDDRIEVI 102 (205)
T ss_dssp HHHHHHHHHHHHHHHT-SEEEEESTTT---SHHHHHHHH-T-STTTSEEEEEESSHH-HHHHHHHHHHH-TTGGGGEEEE
T ss_pred CHHHHHHHHHHHHhcCCceEEEecccc---ccHHHHHHH-h-hcccceEEEecCcHH-HHHHHHHHHHh-cCCCCcEEEE
Confidence 455667778888889998873 3455 777776653 2 345568887766443 23334333333 343 45555
Q ss_pred CCCCHHHHHHhhhc---CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC
Q 013079 174 DISDHEMVNSAIVQ---GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 174 ~~~d~~~l~~ai~~---~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 228 (450)
..+-.+-|.+.... .+..+|++... .......++.+.++.+ .|..+++|++.
T Consensus 103 ~gda~~~l~~l~~~~~~~~fD~VFiDa~--K~~y~~y~~~~~~ll~-~ggvii~DN~l 157 (205)
T PF01596_consen 103 EGDALEVLPELANDGEEGQFDFVFIDAD--KRNYLEYFEKALPLLR-PGGVIIADNVL 157 (205)
T ss_dssp ES-HHHHHHHHHHTTTTTSEEEEEEEST--GGGHHHHHHHHHHHEE-EEEEEEEETTT
T ss_pred EeccHhhHHHHHhccCCCceeEEEEccc--ccchhhHHHHHhhhcc-CCeEEEEcccc
Confidence 44444445554412 24689999753 3333344666666554 46788999996
No 414
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=47.94 E-value=2.4e+02 Score=28.57 Aligned_cols=52 Identities=21% Similarity=0.368 Sum_probs=37.9
Q ss_pred eCCCCHHHHHHhhhcCCceEEEEecCC---CCc-----ccccCHH----HHHHHHHhcCCEEEE
Q 013079 173 VDISDHEMVNSAIVQGRTKVLYFESIS---NPT-----LAVANIP----ELSRLAHDKGVTVVV 224 (450)
Q Consensus 173 v~~~d~~~l~~ai~~~~t~lv~i~~~~---Npt-----G~v~~l~----~I~~la~~~gi~liv 224 (450)
....+++++.+.+.+.++.+++|.+++ +|. |++..++ +|.++||++|+.++.
T Consensus 152 ~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 152 LAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred ehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 344589999998867788888887554 344 6665444 888999999987654
No 415
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=47.90 E-value=33 Score=29.97 Aligned_cols=46 Identities=22% Similarity=0.359 Sum_probs=36.6
Q ss_pred CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcC--CEEEEeCCC
Q 013079 177 DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKG--VTVVVDNTF 228 (450)
Q Consensus 177 d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~g--i~livD~~~ 228 (450)
|..++++++ ..+...+++- +|.+.+++++.+.++++| +.+|+|-+.
T Consensus 12 ~~~~le~~l-es~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~ 59 (181)
T COG1954 12 DNKDLEKAL-ESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVE 59 (181)
T ss_pred hHHHHHHHh-cCCCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhc
Confidence 778899999 6667766653 678999999999999876 677788664
No 416
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=47.87 E-value=1.8e+02 Score=28.22 Aligned_cols=112 Identities=11% Similarity=0.100 Sum_probs=53.4
Q ss_pred hhcCCCCCCCCCccccCCCChhHHHHHHHHHHH-hCCCeEEEecChHHHHHHHHHHHHHhccCC--CEEEEeCCCchhHH
Q 013079 79 MFAGELGPDRDFFIYSRHFNPTVLNLSRQMAAL-EGTEAAYCTASDKAGMSAISSVLMQLCSSG--GHVVAARTLYGGTH 155 (450)
Q Consensus 79 ~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l-~g~~~~~~tsg~~~gt~ai~~al~~l~~~g--d~Vi~~~~~y~~~~ 155 (450)
+++.++.||.++|.. |..... +.+.+.+- .....++..++ |..+..++..+-. .| -.|+++...-....
T Consensus 19 ~~K~E~~nptGS~K~-R~a~~~---l~~a~~~g~~~~~~vv~aSs---GN~g~alA~~a~~-~G~~~~iv~p~~~~~~k~ 90 (316)
T cd06448 19 FLKLENLQPSGSFKI-RGIGHL---CQKSAKQGLNECVHVVCSSG---GNAGLAAAYAARK-LGVPCTIVVPESTKPRVV 90 (316)
T ss_pred EEEeccCCCcCChHH-HHHHHH---HHHHHHhhcccCCeEEEeCC---cHHHHHHHHHHHH-cCCCEEEEECCCCCHHHH
Confidence 455667777665543 222222 22222211 11345666667 7777777665432 23 24555543323333
Q ss_pred HHHHHhCCCccCeeEEEeCCCCHH---HHHHhhhcCCceEEEEecCCCCcc
Q 013079 156 ALLTHFFPRACNITTTFVDISDHE---MVNSAIVQGRTKVLYFESISNPTL 203 (450)
Q Consensus 156 ~~~~~~~~~~~g~~v~~v~~~d~~---~l~~ai~~~~t~lv~i~~~~NptG 203 (450)
..++ .+|.++..++.+..+ .+.+.+...+...+++..-+||.+
T Consensus 91 ~~l~-----~~GA~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~n~~~ 136 (316)
T cd06448 91 EKLR-----DEGATVVVHGKVWWEADNYLREELAENDPGPVYVHPFDDPLI 136 (316)
T ss_pred HHHH-----HcCCEEEEECCchHHHHHHHHHHHHhccCCcEEeCCCCCchh
Confidence 3332 379999888754122 223333222224566654456654
No 417
>PRK13937 phosphoheptose isomerase; Provisional
Probab=47.54 E-value=1.9e+02 Score=25.64 Aligned_cols=34 Identities=9% Similarity=0.080 Sum_probs=24.6
Q ss_pred cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 187 QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 187 ~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
+++.-++.+.. .|...++.++++.|+++|+.+|.
T Consensus 105 ~~~Dl~i~iS~----sG~t~~~~~~~~~ak~~g~~~I~ 138 (188)
T PRK13937 105 RPGDVLIGIST----SGNSPNVLAALEKARELGMKTIG 138 (188)
T ss_pred CCCCEEEEEeC----CCCcHHHHHHHHHHHHCCCeEEE
Confidence 44444555543 56778899999999999987764
No 418
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=45.87 E-value=1.3e+02 Score=28.09 Aligned_cols=105 Identities=17% Similarity=0.206 Sum_probs=61.3
Q ss_pred HHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCC------CEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-
Q 013079 104 LSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSG------GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS- 176 (450)
Q Consensus 104 l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~g------d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~- 176 (450)
++..+..+...+.++|||. .|.......+...+ ..+.+-. ..+...++ + .|+.+.+++.+
T Consensus 41 l~~~l~~l~~~d~vvfTS~-----~av~~~~~~l~~~~~~~~~~~~i~aVG---~~Ta~~l~----~-~G~~~~~~p~~~ 107 (248)
T COG1587 41 LEVALEDLDSADWVVFTSP-----NAVRFFFEALKEQGLDALKNKKIAAVG---EKTAEALR----K-LGIKVDFIPEDG 107 (248)
T ss_pred HHHHHhccccCCEEEEECH-----HHHHHHHHHHHhhcccccccCeEEEEc---HHHHHHHH----H-hCCCCCcCCCcc
Confidence 6677777766678888876 55555555444333 3444333 22333343 3 78888888763
Q ss_pred CHHHHHHhhhcC---CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC
Q 013079 177 DHEMVNSAIVQG---RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 177 d~~~l~~ai~~~---~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 228 (450)
+.+.+...+... ..+++++-+.. |. +.|.+-..++|+.+..=++|
T Consensus 108 ~~~~l~~~l~~~~~~~~~vl~~~~~~---~r----~~l~~~L~~~G~~v~~~~~Y 155 (248)
T COG1587 108 DSEGLLEELPELLKGGKRVLILRGNG---GR----EVLEEKLEERGAEVREVEVY 155 (248)
T ss_pred chHHHHHHhhhhccCCCeEEEEcCCC---ch----HHHHHHHHhCCCEEEEEeee
Confidence 555555555221 24565543221 22 56777778889888877777
No 419
>PRK06450 threonine synthase; Validated
Probab=45.75 E-value=1.2e+02 Score=29.97 Aligned_cols=107 Identities=15% Similarity=0.116 Sum_probs=59.1
Q ss_pred hhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHH
Q 013079 79 MFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHAL 157 (450)
Q Consensus 79 ~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~ 157 (450)
+++.++.||.++|.. |.....+..+++ .|...++..|+ |-.+..++..+- ..-.-+|+++...-..-...
T Consensus 68 ~~K~E~~nPTGSfKD-Rga~~~i~~a~~-----~g~~~vv~aSs---GN~g~slA~~aa~~G~~~~i~vP~~~~~~k~~~ 138 (338)
T PRK06450 68 WFKLDFLNPTGSYKD-RGSVTLISYLAE-----KGIKQISEDSS---GNAGASIAAYGAAAGIEVKIFVPETASGGKLKQ 138 (338)
T ss_pred EEEecCCCCcCCCHH-HHHHHHHHHHHH-----cCCCEEEEECC---cHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHH
Confidence 456778889876632 222222333322 36667777787 888777766543 22223566665433333333
Q ss_pred HHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCc
Q 013079 158 LTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPT 202 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~Npt 202 (450)
++ ..|.++..++. +.++..++. ++ ...+++.+..||.
T Consensus 139 i~-----~~GA~vi~v~~-~~~~~~~~a-~~-~g~~~~~~~~np~ 175 (338)
T PRK06450 139 IE-----SYGAEVVRVRG-SREDVAKAA-EN-SGYYYASHVLQPQ 175 (338)
T ss_pred HH-----HcCCEEEEECC-CHHHHHHHH-Hh-cCeEeccCCCCcc
Confidence 32 37889988875 455554443 22 3446666666664
No 420
>smart00642 Aamy Alpha-amylase domain.
Probab=45.46 E-value=19 Score=31.41 Aligned_cols=29 Identities=24% Similarity=0.411 Sum_probs=25.7
Q ss_pred CcccccCHHHHHHHHHhcCCEEEEeCCCC
Q 013079 201 PTLAVANIPELSRLAHDKGVTVVVDNTFS 229 (450)
Q Consensus 201 ptG~v~~l~~I~~la~~~gi~livD~~~~ 229 (450)
..|+..+++++++.||++|+.+++|-+..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 45778889999999999999999998863
No 421
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=44.90 E-value=1.4e+02 Score=28.22 Aligned_cols=85 Identities=11% Similarity=0.187 Sum_probs=49.7
Q ss_pred ccCC-CEEEEeCCCchhHHHHHHHhCCCccCeeEEE-eCCC-CHHHHHHhhhcCCceEEEEecCCCCccccc----CHHH
Q 013079 138 CSSG-GHVVAARTLYGGTHALLTHFFPRACNITTTF-VDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVA----NIPE 210 (450)
Q Consensus 138 ~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~-v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~----~l~~ 210 (450)
.+.| |.|++++-.+........ ...+ .|+...+ +.+. ..+.++... +.....||+.+....||.-. .+.+
T Consensus 116 ~~aGvdgviipDLP~ee~~~~~~-~~~~-~gi~~I~lv~PtT~~eri~~i~-~~a~gFIY~vS~~GvTG~~~~~~~~~~~ 192 (263)
T CHL00200 116 SQAGVKGLIIPDLPYEESDYLIS-VCNL-YNIELILLIAPTSSKSRIQKIA-RAAPGCIYLVSTTGVTGLKTELDKKLKK 192 (263)
T ss_pred HHcCCeEEEecCCCHHHHHHHHH-HHHH-cCCCEEEEECCCCCHHHHHHHH-HhCCCcEEEEcCCCCCCCCccccHHHHH
Confidence 3445 778888866654444432 2222 5666554 3333 455665544 44445788877777888742 3666
Q ss_pred HHHHHHhc-CCEEEEe
Q 013079 211 LSRLAHDK-GVTVVVD 225 (450)
Q Consensus 211 I~~la~~~-gi~livD 225 (450)
+.+..|++ +.++.+|
T Consensus 193 ~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 193 LIETIKKMTNKPIILG 208 (263)
T ss_pred HHHHHHHhcCCCEEEE
Confidence 66666664 6677665
No 422
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=44.89 E-value=1.9e+02 Score=29.96 Aligned_cols=70 Identities=14% Similarity=0.204 Sum_probs=41.7
Q ss_pred CCEEEEeCCCchhHHHHHHHhCCCccCeeEEEe-CC--C------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHH
Q 013079 141 GGHVVAARTLYGGTHALLTHFFPRACNITTTFV-DI--S------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 211 (450)
Q Consensus 141 gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v-~~--~------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I 211 (450)
+..+++..+.|.-. ++ + +|++...+ .. . ++.+|.+.++..+.++|+++.-.+. ....+
T Consensus 371 ~r~vvt~H~af~YL---a~----~-YGL~~~~~~~~~~~~ePS~~~L~~Li~~IK~~~V~~IF~Epq~~~-----~~~~l 437 (479)
T TIGR03772 371 RRHLITTHDAYSYL---GQ----A-YGLNIAGFVTPNPAVEPSLADRRRLTRTIENLKVPAVFLEPNLAA-----RSTTL 437 (479)
T ss_pred CCEEEEECCcHHHH---HH----H-CCCeEEeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC-----chHHH
Confidence 35677777665522 22 1 46554322 11 1 5566666675678999998765442 23456
Q ss_pred HHHHHhcCCEEE
Q 013079 212 SRLAHDKGVTVV 223 (450)
Q Consensus 212 ~~la~~~gi~li 223 (450)
..++++.|+.++
T Consensus 438 ~~IA~e~Gv~V~ 449 (479)
T TIGR03772 438 NEIADELGVRVC 449 (479)
T ss_pred HHHHHHcCCcEE
Confidence 777888888764
No 423
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=44.79 E-value=76 Score=31.03 Aligned_cols=130 Identities=16% Similarity=0.227 Sum_probs=74.9
Q ss_pred HHHHHHHHHHhccCCCEEEE-eCCCchh-HHHHHHHhCCCccCeeEEEeC-CCCH-----HHHHHhhhcCCceEEEEecC
Q 013079 127 MSAISSVLMQLCSSGGHVVA-ARTLYGG-THALLTHFFPRACNITTTFVD-ISDH-----EMVNSAIVQGRTKVLYFESI 198 (450)
Q Consensus 127 t~ai~~al~~l~~~gd~Vi~-~~~~y~~-~~~~~~~~~~~~~g~~v~~v~-~~d~-----~~l~~ai~~~~t~lv~i~~~ 198 (450)
|..+.=...-+.+.|..|++ ...+|-+ ....++....+ .|+++..-. ..|+ ++++.+. ..+..+|++.+.
T Consensus 153 TTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er-~gv~vI~~~~G~DpAaVafDAi~~Ak-ar~~DvvliDTA 230 (340)
T COG0552 153 TTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGER-LGVPVISGKEGADPAAVAFDAIQAAK-ARGIDVVLIDTA 230 (340)
T ss_pred HhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHH-hCCeEEccCCCCCcHHHHHHHHHHHH-HcCCCEEEEeCc
Confidence 44444444445667777665 4444532 23334334444 677776532 2355 4566666 667889999875
Q ss_pred ---CCCcccccCHHHHHHHHHhcC------CEEEEeCCCCCCCCCc-----cCCCCeEEEeCCCCccccCccceEEEEE
Q 013079 199 ---SNPTLAVANIPELSRLAHDKG------VTVVVDNTFSPLVLSP-----ARLGADVVVHSISKFISGGADIIAGAVC 263 (450)
Q Consensus 199 ---~NptG~v~~l~~I~~la~~~g------i~livD~~~~~~~~~~-----~~~g~di~~~S~sK~~g~~g~~igG~l~ 263 (450)
||-+.-..++++|.+++++.. ++++.|++.+.-..+- ...+.|-++ ++|.=|-. -||.++
T Consensus 231 GRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI--lTKlDgtA---KGG~il 304 (340)
T COG0552 231 GRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII--LTKLDGTA---KGGIIL 304 (340)
T ss_pred ccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE--EEecccCC---Ccceee
Confidence 555655667999999998754 6777799853221111 112556666 67776532 246664
No 424
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=44.48 E-value=2.5e+02 Score=27.15 Aligned_cols=101 Identities=19% Similarity=0.144 Sum_probs=56.7
Q ss_pred CCeEEEecChHHHHHHHHHHHHHhccCCC--EEEE--eCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCC
Q 013079 114 TEAAYCTASDKAGMSAISSVLMQLCSSGG--HVVA--ARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGR 189 (450)
Q Consensus 114 ~~~~~~tsg~~~gt~ai~~al~~l~~~gd--~Vi~--~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~ 189 (450)
...+++|-| -+.+....+......|. +|++ +.|.+.+... + +.+.. .|+++..+. | .++...+ .+
T Consensus 119 dg~~IlTh~---~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~-a-k~L~~-~gI~~~~I~--D-sa~~~~~--~~ 187 (301)
T COG1184 119 DGDVILTHS---FSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIM-A-KELRQ-SGIPVTVIV--D-SAVGAFM--SR 187 (301)
T ss_pred CCCEEEEec---CcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHH-H-HHHHH-cCCceEEEe--c-hHHHHHH--Hh
Confidence 345788888 67777766766666665 4444 4577776543 2 33444 788888764 2 2233333 23
Q ss_pred ceEEEEec-CCCCcccccC---HHHHHHHHHhcCCEEEEe
Q 013079 190 TKVLYFES-ISNPTLAVAN---IPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 190 t~lv~i~~-~~NptG~v~~---l~~I~~la~~~gi~livD 225 (450)
...|++-. .--..|.+.. -.-|+..||+.+++|++=
T Consensus 188 vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 188 VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 44444421 1111222221 346788889999887753
No 425
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=43.40 E-value=52 Score=29.58 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=29.5
Q ss_pred CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 188 GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 188 ~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
-.+..|++| .-|+.|.....+++.++|++||++++.
T Consensus 155 l~Pa~VicE-i~~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 155 LKPAGVICE-IMNDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCcEEEEE-EeCCCccccChHHHHHHHHHcCCcEEE
Confidence 356666666 456799999999999999999999875
No 426
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=42.77 E-value=1e+02 Score=29.22 Aligned_cols=102 Identities=17% Similarity=0.155 Sum_probs=53.1
Q ss_pred CCeEEEecChHHHHHHHHHHHHHhccCCC--EEEE--eCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCC
Q 013079 114 TEAAYCTASDKAGMSAISSVLMQLCSSGG--HVVA--ARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGR 189 (450)
Q Consensus 114 ~~~~~~tsg~~~gt~ai~~al~~l~~~gd--~Vi~--~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~ 189 (450)
....++|-| -+..+...+....+.|. +|++ +.|.+.+ ...+..+. . .|+++++++.. .+-..+ ..+
T Consensus 107 ~~~~ILT~~---~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG-~~~a~~L~-~-~gi~v~~i~d~---~~~~~m-~~~ 176 (282)
T PF01008_consen 107 DGDTILTHG---YSSTVERFLLSAKKKGKKFRVIVLESRPYNEG-RLMAKELA-E-AGIPVTLIPDS---AVGYVM-PRD 176 (282)
T ss_dssp TTEEEEEES-----SHHHHHHHHHHHTTEEEEEEEE--TTTTHH-HTHHHHHH-H-TT-EEEEE-GG---GHHHHH-HCT
T ss_pred CCeEEEEeC---CchHHHHHHHHHHHcCCeEEEEEccCCcchhh-hhHHHHhh-h-cceeEEEEech---HHHHHH-HHh
Confidence 455788877 66666666665545453 3444 4466666 33443333 3 69999998633 333444 223
Q ss_pred ceEEEEec-CCCCccccc---CHHHHHHHHHhcCCEEEEe
Q 013079 190 TKVLYFES-ISNPTLAVA---NIPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 190 t~lv~i~~-~~NptG~v~---~l~~I~~la~~~gi~livD 225 (450)
+..|++-. .--+.|.+. --..++-.|++++++++|=
T Consensus 177 vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 177 VDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp ESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred CCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 55555531 112334332 2456777889999998875
No 427
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=42.49 E-value=2.7e+02 Score=25.51 Aligned_cols=123 Identities=15% Similarity=0.257 Sum_probs=63.5
Q ss_pred HHHhccCCCEEEEeCCC-chhHHHHHHHhCCCccCee--EEEeCCCCHHHHHHhhhcCCceEEEEecCCCCccccc----
Q 013079 134 LMQLCSSGGHVVAARTL-YGGTHALLTHFFPRACNIT--TTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVA---- 206 (450)
Q Consensus 134 l~~l~~~gd~Vi~~~~~-y~~~~~~~~~~~~~~~g~~--v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~---- 206 (450)
+..+.+.|-..|+.-.+ .......++.. +. .|++ +..-|.+.++.++..+ ++..+|.++++|--.|.-.
T Consensus 77 i~~fa~agad~It~H~E~~~~~~r~i~~I-k~-~G~kaGv~lnP~Tp~~~i~~~l--~~vD~VllMsVnPGfgGQ~Fi~~ 152 (220)
T COG0036 77 IEAFAKAGADIITFHAEATEHIHRTIQLI-KE-LGVKAGLVLNPATPLEALEPVL--DDVDLVLLMSVNPGFGGQKFIPE 152 (220)
T ss_pred HHHHHHhCCCEEEEEeccCcCHHHHHHHH-HH-cCCeEEEEECCCCCHHHHHHHH--hhCCEEEEEeECCCCcccccCHH
Confidence 34455556444443333 22233333222 11 3544 3444556778888776 4678888888753333331
Q ss_pred ---CHHHHHHHHHhc-CCEEEEeCCCCCCCCC----ccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHHHHh
Q 013079 207 ---NIPELSRLAHDK-GVTVVVDNTFSPLVLS----PARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLH 276 (450)
Q Consensus 207 ---~l~~I~~la~~~-gi~livD~~~~~~~~~----~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~~~~ 276 (450)
-++++.++..+. ++.+=+|. ++..+ ....|+|+++ .|.++...+++.+.++.++
T Consensus 153 ~l~Ki~~lr~~~~~~~~~~IeVDG---GI~~~t~~~~~~AGad~~V-------------aGSalF~~~d~~~~i~~~~ 214 (220)
T COG0036 153 VLEKIRELRAMIDERLDILIEVDG---GINLETIKQLAAAGADVFV-------------AGSALFGADDYKATIRELR 214 (220)
T ss_pred HHHHHHHHHHHhcccCCeEEEEeC---CcCHHHHHHHHHcCCCEEE-------------EEEEEeCCccHHHHHHHHH
Confidence 244444444433 56677884 33322 2234889887 2345666655555555444
No 428
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=42.41 E-value=96 Score=25.82 Aligned_cols=62 Identities=13% Similarity=0.218 Sum_probs=42.5
Q ss_pred HHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCC
Q 013079 156 ALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGV 220 (450)
Q Consensus 156 ~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi 220 (450)
..+...+.. .|+++..+..+ .++.+.++....+..+|.+++.+ |.+...++++.+.+++.|+
T Consensus 17 niv~~~L~~-~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 17 KILDHAFTE-AGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred HHHHHHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCCC
Confidence 333344444 79999887765 56776665547788888886544 3445678899999988764
No 429
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=42.33 E-value=1.4e+02 Score=29.40 Aligned_cols=115 Identities=10% Similarity=0.111 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhC-----CCeEEEecChHHHHHHHHHHHHHhccCCCEE--EEeCCCchhHHH--HHHHhCCCccCeeEEE
Q 013079 102 LNLSRQMAALEG-----TEAAYCTASDKAGMSAISSVLMQLCSSGGHV--VAARTLYGGTHA--LLTHFFPRACNITTTF 172 (450)
Q Consensus 102 ~~l~~~iA~l~g-----~~~~~~tsg~~~gt~ai~~al~~l~~~gd~V--i~~~~~y~~~~~--~~~~~~~~~~g~~v~~ 172 (450)
++|++.+.++-+ .+-++..|| |-.+..++....-.-|..+ ++.++.+..-.. .++.+... +|+....
T Consensus 43 ~~l~~l~~~~k~~~~~~yD~iV~lSG---GkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~-lgvd~~~ 118 (343)
T TIGR03573 43 KELEELVDKIKKKGGGRYDCIIGVSG---GKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKK-LGFDLHT 118 (343)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEECCC---CHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHH-cCCCeEE
Confidence 345555555432 234678899 8777666533222224333 455666542211 23333333 6877766
Q ss_pred eCCCCHHHHHHhhhcCCceEEEEecCCCCcccc--cCHHHHHHHHHhcCCEEEEeCC
Q 013079 173 VDISDHEMVNSAIVQGRTKVLYFESISNPTLAV--ANIPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 173 v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v--~~l~~I~~la~~~gi~livD~~ 227 (450)
+.+ |++.+.... ....+ ...+|.... .....+.++|+++|+.+|+...
T Consensus 119 i~~-d~~~~~~l~-~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~ 168 (343)
T TIGR03573 119 ITI-NPETFRKLQ-RAYFK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGE 168 (343)
T ss_pred EeC-CHHHHHHHH-HHHHh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCC
Confidence 654 445444433 11111 222333222 2356888999999999998865
No 430
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=41.91 E-value=1.2e+02 Score=25.36 Aligned_cols=67 Identities=10% Similarity=0.108 Sum_probs=44.3
Q ss_pred CchhHHHHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcC
Q 013079 150 LYGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKG 219 (450)
Q Consensus 150 ~y~~~~~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~g 219 (450)
.|.--...+..+++. .|++|.....+ +++++.++..+.+..+|.+++-. +.....++++.+.+++.+
T Consensus 14 ~Hd~g~~iv~~~l~~-~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 14 GHDRGAKVIATAYAD-LGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKLG 81 (132)
T ss_pred ccHHHHHHHHHHHHh-CCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhcC
Confidence 344444555555554 79999887765 56666554437788888886544 344555788888888764
No 431
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=41.81 E-value=1.1e+02 Score=24.92 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=42.3
Q ss_pred HHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc---CCEEEE
Q 013079 156 ALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK---GVTVVV 224 (450)
Q Consensus 156 ~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~---gi~liv 224 (450)
..+..+++. .|+++.+...+ .++++.+++...++.+|.++.... -....++++.+.+++. ++.+++
T Consensus 17 ~~~~~~l~~-~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~--~~~~~~~~~~~~L~~~~~~~i~i~~ 86 (122)
T cd02071 17 KVIARALRD-AGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSG--GHMTLFPEVIELLRELGAGDILVVG 86 (122)
T ss_pred HHHHHHHHH-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccch--hhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 334445554 79999998765 566776666467888888865532 2344577888877776 344444
No 432
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=41.33 E-value=3.4e+02 Score=26.24 Aligned_cols=103 Identities=18% Similarity=0.210 Sum_probs=58.4
Q ss_pred CeEEEecChHHHHHHHHHHHHHhccCCC--EEEEeC--CCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCc
Q 013079 115 EAAYCTASDKAGMSAISSVLMQLCSSGG--HVVAAR--TLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRT 190 (450)
Q Consensus 115 ~~~~~tsg~~~gt~ai~~al~~l~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t 190 (450)
.++++|-| .+-....-+....++|. +|++.. |.+.+ +.....+. + .|++.+.++ | .++.+.+ ..-.
T Consensus 163 nEviLT~g---~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qg-H~~Ak~la-~-~giettVI~--d-aaVfA~M-srVn 232 (353)
T KOG1465|consen 163 NEVILTLG---SSRTVENFLKHAAKKGRKFRVIVAEGAPNNQG-HELAKPLA-Q-AGIETTVIP--D-AAVFAMM-SRVN 232 (353)
T ss_pred CceEEecC---ccHHHHHHHHHHHhccCceEEEEeecCCcccc-hHhhHHHH-H-cCCeeEEec--c-HHHHHHh-hhcc
Confidence 45788888 66555555554455543 455543 55554 33333333 2 588876654 3 3444445 3334
Q ss_pred eEEEEecCCCCcccc---cCHHHHHHHHHhcCCEEEEeCC
Q 013079 191 KVLYFESISNPTLAV---ANIPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 191 ~lv~i~~~~NptG~v---~~l~~I~~la~~~gi~livD~~ 227 (450)
|+|+-.+.--+.|.+ .-..-++..||+|-++++|=+-
T Consensus 233 KVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp 272 (353)
T KOG1465|consen 233 KVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAP 272 (353)
T ss_pred eEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecc
Confidence 455544443344444 2366788888999999887654
No 433
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=41.33 E-value=86 Score=29.39 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=53.9
Q ss_pred CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeC---CCchh-HHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCc
Q 013079 115 EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAAR---TLYGG-THALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRT 190 (450)
Q Consensus 115 ~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~---~~y~~-~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t 190 (450)
.-++.+|| |..+-.++..+.-..|+.++... |..+. ........... .|++..+++.+-++ .. +
T Consensus 19 kv~vAfSG---GvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~-iGi~H~~i~~~~~~--~~-~----- 86 (269)
T COG1606 19 KVVVAFSG---GVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKE-IGIRHEFIKMNRMD--PE-F----- 86 (269)
T ss_pred eEEEEecC---CccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHH-hCCcceeeehhhcc--hh-h-----
Confidence 34688999 98877766655444577655322 22221 22223222222 68887777654222 11 1
Q ss_pred eEEEEecCCCCcccc--cCHHHHHHHHHhcCCEEEEeCCC
Q 013079 191 KVLYFESISNPTLAV--ANIPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 191 ~lv~i~~~~NptG~v--~~l~~I~~la~~~gi~livD~~~ 228 (450)
..++-|+.-.+ .=...|.+.++++|.-+|+|.+-
T Consensus 87 ----~~n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtN 122 (269)
T COG1606 87 ----KENPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTN 122 (269)
T ss_pred ----ccCCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCc
Confidence 11222222111 12567889999999999999884
No 434
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=40.54 E-value=1.9e+02 Score=27.52 Aligned_cols=71 Identities=17% Similarity=0.189 Sum_probs=39.5
Q ss_pred cCeeEEEeCCCCHHH-HHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCCCCCccCCCCeEEE
Q 013079 166 CNITTTFVDISDHEM-VNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPLVLSPARLGADVVV 244 (450)
Q Consensus 166 ~g~~v~~v~~~d~~~-l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~~~~~~~~g~di~~ 244 (450)
.|..+..++...... ....+ +++.-+|.+.. .|....+-++++.++++|+.+|. .+....+|+.--+|+++
T Consensus 155 ig~~~~~~~d~~~~~~~~~~~-~~~Dv~i~iS~----sG~t~e~i~~a~~ak~~ga~vIa---iT~~~~spla~~Ad~~L 226 (281)
T COG1737 155 IGLNVVALSDTHGQLMQLALL-TPGDVVIAISF----SGYTREIVEAAELAKERGAKVIA---ITDSADSPLAKLADIVL 226 (281)
T ss_pred cCCceeEecchHHHHHHHHhC-CCCCEEEEEeC----CCCcHHHHHHHHHHHHCCCcEEE---EcCCCCCchhhhhceEE
Confidence 566666654222111 11223 44444555533 67788899999999999987764 12222344433456655
No 435
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=40.48 E-value=1.7e+02 Score=26.21 Aligned_cols=98 Identities=11% Similarity=0.156 Sum_probs=58.3
Q ss_pred EEEEeCC--CchhHH-HHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc
Q 013079 143 HVVAART--LYGGTH-ALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK 218 (450)
Q Consensus 143 ~Vi~~~~--~y~~~~-~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~ 218 (450)
+|++..+ ++|..- ..+..++.. .|+++.++-.+ .++++.+++...++.+|.+...... ....+.++.+.+++.
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~-~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~--~~~~~~~~i~~l~~~ 162 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRA-NGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTT--TMYGQKDINDKLKEE 162 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHh-CCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcccccc--CHHHHHHHHHHHHHc
Confidence 5554333 344432 333344554 79999998766 6788888886678888877654332 245578888888876
Q ss_pred C----CEEEEeCCCCCCCCCc---cCCCCeEEEeCC
Q 013079 219 G----VTVVVDNTFSPLVLSP---ARLGADVVVHSI 247 (450)
Q Consensus 219 g----i~livD~~~~~~~~~~---~~~g~di~~~S~ 247 (450)
+ +.+++=.. .+++ ..+|+|.+..++
T Consensus 163 ~~~~~v~i~vGG~----~~~~~~~~~~gad~~~~da 194 (197)
T TIGR02370 163 GYRDSVKFMVGGA----PVTQDWADKIGADVYGENA 194 (197)
T ss_pred CCCCCCEEEEECh----hcCHHHHHHhCCcEEeCCh
Confidence 3 55665332 2222 234777666443
No 436
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=40.04 E-value=1.8e+02 Score=28.20 Aligned_cols=88 Identities=18% Similarity=0.197 Sum_probs=47.2
Q ss_pred HHHHhccCCC--EEEE--eCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEe-cCCCCccccc-
Q 013079 133 VLMQLCSSGG--HVVA--ARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE-SISNPTLAVA- 206 (450)
Q Consensus 133 al~~l~~~gd--~Vi~--~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~-~~~NptG~v~- 206 (450)
.++...+.|. +|++ ++|.+.+.......+. + .|++++++.. ..+...+.+.++..|++- ..-...|.+.
T Consensus 142 ~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a~~L~-~-~gI~vtlI~D---sa~~~~m~~~~vd~VlvGAd~v~~nG~v~n 216 (303)
T TIGR00524 142 VIRSAWEDGKRIRVIACETRPRNQGSRLTAWELM-Q-DGIDVTLITD---SMAAYFMQKGEIDAVIVGADRIARNGDVAN 216 (303)
T ss_pred HHHHHHHcCCceEEEECCCCCccchHHHHHHHHH-H-CCCCEEEECh---hHHHHHccccCCCEEEEcccEEecCCCEeE
Confidence 3333334443 4555 3577776444443333 3 6999998752 233344422256666652 1112334332
Q ss_pred C--HHHHHHHHHhcCCEEEEe
Q 013079 207 N--IPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 207 ~--l~~I~~la~~~gi~livD 225 (450)
. -.-++-+|+.++++|++=
T Consensus 217 k~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 217 KIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred hhhHHHHHHHHHHhCCCEEEe
Confidence 2 346777889999998874
No 437
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=39.93 E-value=2.2e+02 Score=24.43 Aligned_cols=83 Identities=18% Similarity=0.195 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccc
Q 013079 126 GMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAV 205 (450)
Q Consensus 126 gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v 205 (450)
|.-+-. ++..|++.|-+|.+..-.-..... . .++++...+..|++.+.+++ . +...|+...+.++. ..
T Consensus 8 G~vG~~-l~~~L~~~~~~V~~~~R~~~~~~~-------~-~~~~~~~~d~~d~~~~~~al-~-~~d~vi~~~~~~~~-~~ 75 (183)
T PF13460_consen 8 GFVGRA-LAKQLLRRGHEVTALVRSPSKAED-------S-PGVEIIQGDLFDPDSVKAAL-K-GADAVIHAAGPPPK-DV 75 (183)
T ss_dssp SHHHHH-HHHHHHHTTSEEEEEESSGGGHHH-------C-TTEEEEESCTTCHHHHHHHH-T-TSSEEEECCHSTTT-HH
T ss_pred ChHHHH-HHHHHHHCCCEEEEEecCchhccc-------c-cccccceeeehhhhhhhhhh-h-hcchhhhhhhhhcc-cc
Confidence 444433 334455556555543332222221 2 57888888888999999999 5 44455543322222 24
Q ss_pred cCHHHHHHHHHhcCC
Q 013079 206 ANIPELSRLAHDKGV 220 (450)
Q Consensus 206 ~~l~~I~~la~~~gi 220 (450)
...+.+.+.|++.|+
T Consensus 76 ~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 76 DAAKNIIEAAKKAGV 90 (183)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred ccccccccccccccc
Confidence 446788888888765
No 438
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=39.47 E-value=90 Score=32.56 Aligned_cols=60 Identities=17% Similarity=0.222 Sum_probs=42.6
Q ss_pred cC-eeEEEeCCC----CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc--CCEEEEeCCC
Q 013079 166 CN-ITTTFVDIS----DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTF 228 (450)
Q Consensus 166 ~g-~~v~~v~~~----d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~ 228 (450)
.| .+|..+|.. +.+++.+.+...++.+|.++.. |.......++++.+|+. ++.+|+=..+
T Consensus 35 ~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h 101 (497)
T TIGR02026 35 AGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIH 101 (497)
T ss_pred cCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 57 588887753 5677777774567888887542 33455667888888886 8999887665
No 439
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=39.38 E-value=70 Score=29.16 Aligned_cols=92 Identities=16% Similarity=0.218 Sum_probs=54.2
Q ss_pred HHHHHHhhhcCCceEEEEecCCCCccc-ccCHHHHHHHHHhcCCEEEEeCCC---CCCCCCccCCC-CeEEEeCCCCccc
Q 013079 178 HEMVNSAIVQGRTKVLYFESISNPTLA-VANIPELSRLAHDKGVTVVVDNTF---SPLVLSPARLG-ADVVVHSISKFIS 252 (450)
Q Consensus 178 ~~~l~~ai~~~~t~lv~i~~~~NptG~-v~~l~~I~~la~~~gi~livD~~~---~~~~~~~~~~g-~di~~~S~sK~~g 252 (450)
++.+++++ +....+|-+=--+..+-. ..-.+++.++|++|++.|++++=. ....-+...+| -|+-..-..|.++
T Consensus 24 ~~~ve~al-~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGVHlGq~D~~~~~ar~~~~ 102 (211)
T COG0352 24 LEWVEAAL-KGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDRVDLALAVGADGVHLGQDDMPLAEARELLG 102 (211)
T ss_pred HHHHHHHH-hCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEEEcCCcccchHHHHHhcC
Confidence 68888888 666666655433333333 244579999999999999998743 22222333333 2344445566666
Q ss_pred cCccceEEEEEcCHHHHHHH
Q 013079 253 GGADIIAGAVCGPANLVNSM 272 (450)
Q Consensus 253 ~~g~~igG~l~~~~~~~~~l 272 (450)
++..+ |+-+.+.+-....
T Consensus 103 -~~~iI-G~S~h~~eea~~A 120 (211)
T COG0352 103 -PGLII-GLSTHDLEEALEA 120 (211)
T ss_pred -CCCEE-EeecCCHHHHHHH
Confidence 45556 6655554444333
No 440
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=37.94 E-value=1.7e+02 Score=27.96 Aligned_cols=56 Identities=27% Similarity=0.341 Sum_probs=34.7
Q ss_pred eCCCCHHHHHHhhhcCCceEEEEecCC-CCcccccC-----------HHHHHHHHHhcCCEEE---EeCCC
Q 013079 173 VDISDHEMVNSAIVQGRTKVLYFESIS-NPTLAVAN-----------IPELSRLAHDKGVTVV---VDNTF 228 (450)
Q Consensus 173 v~~~d~~~l~~ai~~~~t~lv~i~~~~-NptG~v~~-----------l~~I~~la~~~gi~li---vD~~~ 228 (450)
+|..|++.+.+.+...++.+|+-+... +.-..-.+ ...|+++|++.|+++| .|-||
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVF 104 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVF 104 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEe
Confidence 455688888888854556666644332 22222211 3478999999998776 45555
No 441
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=37.83 E-value=2.3e+02 Score=27.32 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=55.2
Q ss_pred EEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEE--eCCCCHHHHHHhhhcCCceEEE
Q 013079 117 AYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTF--VDISDHEMVNSAIVQGRTKVLY 194 (450)
Q Consensus 117 ~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~--v~~~d~~~l~~ai~~~~t~lv~ 194 (450)
.+|..+ |--+...+ ..|.+.|..||++--.-......++ .... +| .+.+ .+..|.+.+++++ +....+|-
T Consensus 65 TVFGAt---GFlGryvv-nklak~GSQviiPyR~d~~~~r~lk-vmGd-LG-Qvl~~~fd~~DedSIr~vv-k~sNVVIN 136 (391)
T KOG2865|consen 65 TVFGAT---GFLGRYVV-NKLAKMGSQVIIPYRGDEYDPRHLK-VMGD-LG-QVLFMKFDLRDEDSIRAVV-KHSNVVIN 136 (391)
T ss_pred EEeccc---ccccHHHH-HHHhhcCCeEEEeccCCccchhhee-eccc-cc-ceeeeccCCCCHHHHHHHH-HhCcEEEE
Confidence 466666 66665443 3456778899987533222222221 1122 23 3333 3455999999998 43333333
Q ss_pred EecCCCCccccc--C-----HHHHHHHHHhcCCE
Q 013079 195 FESISNPTLAVA--N-----IPELSRLAHDKGVT 221 (450)
Q Consensus 195 i~~~~NptG~v~--~-----l~~I~~la~~~gi~ 221 (450)
+.---.||+... | -++|+++|++.|+-
T Consensus 137 LIGrd~eTknf~f~Dvn~~~aerlAricke~GVe 170 (391)
T KOG2865|consen 137 LIGRDYETKNFSFEDVNVHIAERLARICKEAGVE 170 (391)
T ss_pred eeccccccCCcccccccchHHHHHHHHHHhhChh
Confidence 333445666552 2 56999999998863
No 442
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=37.77 E-value=1.6e+02 Score=21.59 Aligned_cols=53 Identities=13% Similarity=0.181 Sum_probs=30.3
Q ss_pred CeeEEEeCCCCHHHHH--HhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 167 NITTTFVDISDHEMVN--SAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 167 g~~v~~v~~~d~~~l~--~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
|.++..++........ ..+ +++.-++.+.. .|.-.++.++++.++++|+.+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~-~~~d~~i~iS~----sg~t~~~~~~~~~a~~~g~~ii~ 79 (87)
T cd04795 25 GIEVVALIATELEHASLLSLL-RKGDVVIALSY----SGRTEELLAALEIAKELGIPVIA 79 (87)
T ss_pred CCceEEeCCcHHHHHHHHhcC-CCCCEEEEEEC----CCCCHHHHHHHHHHHHcCCeEEE
Confidence 6666655433222222 223 44444555543 34556788899999999877653
No 443
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=37.62 E-value=3e+02 Score=24.58 Aligned_cols=112 Identities=8% Similarity=0.019 Sum_probs=60.2
Q ss_pred cCCCChhHHHHHHHHHHHhCCC-----e--EEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCcc
Q 013079 94 SRHFNPTVLNLSRQMAALEGTE-----A--AYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRAC 166 (450)
Q Consensus 94 ~r~~~~~~~~l~~~iA~l~g~~-----~--~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~ 166 (450)
+....|+....|+.+=.+++.. . .+|..| |.-+++++-++ -+.++..+-.-.++....+ -... .
T Consensus 19 ~~~~RPT~drVREalFNil~~~~i~g~~~LDlFAGS---GaLGlEAlSRG----A~~~~~vE~~~~a~~~l~~-N~~~-l 89 (187)
T COG0742 19 GPGTRPTTDRVREALFNILAPDEIEGARVLDLFAGS---GALGLEALSRG----AARVVFVEKDRKAVKILKE-NLKA-L 89 (187)
T ss_pred CCCcCCCchHHHHHHHHhccccccCCCEEEEecCCc---cHhHHHHHhCC----CceEEEEecCHHHHHHHHH-HHHH-h
Confidence 3456788888888777766542 2 267777 77777764443 2455555544444433322 1111 3
Q ss_pred C--eeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHH
Q 013079 167 N--ITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLA 215 (450)
Q Consensus 167 g--~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la 215 (450)
+ .+...+..+....|..+-..+.-.+|++..|.+ -|.+....++..+.
T Consensus 90 ~~~~~~~~~~~da~~~L~~~~~~~~FDlVflDPPy~-~~l~~~~~~~~~~~ 139 (187)
T COG0742 90 GLEGEARVLRNDALRALKQLGTREPFDLVFLDPPYA-KGLLDKELALLLLE 139 (187)
T ss_pred CCccceEEEeecHHHHHHhcCCCCcccEEEeCCCCc-cchhhHHHHHHHHH
Confidence 3 344444444444444433112378999999987 45554444444433
No 444
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=37.19 E-value=2.2e+02 Score=22.91 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=20.8
Q ss_pred cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEE
Q 013079 187 QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVV 223 (450)
Q Consensus 187 ~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~li 223 (450)
.++..+|++.. .|.-.++.++++.|+++|+.++
T Consensus 59 ~~~~~~i~iS~----~g~~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 59 TPGDVVIAISF----SGETKETVEAAEIAKERGAKVI 91 (139)
T ss_pred CCCCEEEEEeC----CCCCHHHHHHHHHHHHcCCeEE
Confidence 34444555533 4455667788888999876654
No 445
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=37.14 E-value=3.2e+02 Score=27.73 Aligned_cols=85 Identities=15% Similarity=0.130 Sum_probs=48.1
Q ss_pred HHHHHHHHHhccCC-CEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEe-cCCCCcccc
Q 013079 128 SAISSVLMQLCSSG-GHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE-SISNPTLAV 205 (450)
Q Consensus 128 ~ai~~al~~l~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~-~~~NptG~v 205 (450)
+-..+++..|...| ..|.+.+-+|.-...++.. +|.++. .++++...+ . +..+|+.. +..+|.
T Consensus 188 em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~-----~~~~~~-----~l~el~~~l-~-~~DvVissTsa~~~i--- 252 (414)
T COG0373 188 EMGELVAKHLAEKGVKKITIANRTLERAEELAKK-----LGAEAV-----ALEELLEAL-A-EADVVISSTSAPHPI--- 252 (414)
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH-----hCCeee-----cHHHHHHhh-h-hCCEEEEecCCCccc---
Confidence 55667777777777 6788888888777666652 453332 456777777 3 34444432 222332
Q ss_pred cCHHHHHHHHHhcCCEEEEeCC
Q 013079 206 ANIPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 206 ~~l~~I~~la~~~gi~livD~~ 227 (450)
.....+.+..+.+.-++++|=+
T Consensus 253 i~~~~ve~a~~~r~~~livDia 274 (414)
T COG0373 253 ITREMVERALKIRKRLLIVDIA 274 (414)
T ss_pred cCHHHHHHHHhcccCeEEEEec
Confidence 2333333333332228999965
No 446
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=36.55 E-value=62 Score=32.42 Aligned_cols=48 Identities=21% Similarity=0.322 Sum_probs=34.3
Q ss_pred CHHHHHHhhhc--CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeC
Q 013079 177 DHEMVNSAIVQ--GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDN 226 (450)
Q Consensus 177 d~~~l~~ai~~--~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~ 226 (450)
+.+.|.+.+.. .+..+|++.- .--|.+.+.+++.++||+.|+++++|-
T Consensus 129 ~~~~ll~~~~~~l~~~~~vVLSD--Y~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 129 DENKLLEKIKNALKSFDALVLSD--YAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred hHHHHHHHHHHHhhcCCEEEEec--cccccchhHHHHHHHHHHcCCcEEECC
Confidence 34444444421 3566776643 346888889999999999999999994
No 447
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=36.12 E-value=2.1e+02 Score=29.18 Aligned_cols=99 Identities=8% Similarity=0.076 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhccCCCEEEE-eCCCchh-HHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCccc
Q 013079 127 MSAISSVLMQLCSSGGHVVA-ARTLYGG-THALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLA 204 (450)
Q Consensus 127 t~ai~~al~~l~~~gd~Vi~-~~~~y~~-~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~ 204 (450)
|.+..++.......|.+|.+ ....|.. ....+..+... .|+.+.. ..++..+.+.+...+..+|+|.++..+.-.
T Consensus 238 TtaaKLA~~~~~~~G~~V~Lit~Dt~R~aA~eQLk~yAe~-lgvp~~~--~~~~~~l~~~l~~~~~D~VLIDTaGr~~rd 314 (432)
T PRK12724 238 TSIAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRYADT-MGMPFYP--VKDIKKFKETLARDGSELILIDTAGYSHRN 314 (432)
T ss_pred HHHHHHHHHHHHhcCCeEEEecccchhhhHHHHHHHHHHh-cCCCeee--hHHHHHHHHHHHhCCCCEEEEeCCCCCccC
Confidence 44445544333455665543 3333332 23333333232 4554432 235566666664456788999887655444
Q ss_pred ccCHHHHHHHHHh------cCCEEEEeCCC
Q 013079 205 VANIPELSRLAHD------KGVTVVVDNTF 228 (450)
Q Consensus 205 v~~l~~I~~la~~------~gi~livD~~~ 228 (450)
...++++.++.+. ...++|+|.+.
T Consensus 315 ~~~l~eL~~~~~~~~~~~~~e~~LVLsAt~ 344 (432)
T PRK12724 315 LEQLERMQSFYSCFGEKDSVENLLVLSSTS 344 (432)
T ss_pred HHHHHHHHHHHHhhcCCCCCeEEEEEeCCC
Confidence 4566777766653 25788999876
No 448
>PLN02522 ATP citrate (pro-S)-lyase
Probab=35.67 E-value=5.9e+02 Score=27.38 Aligned_cols=118 Identities=16% Similarity=0.197 Sum_probs=67.7
Q ss_pred eCCCchhHHHHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEe
Q 013079 147 ARTLYGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 147 ~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD 225 (450)
.-|-|..+.+..+. .+. ....+.|+|.. -.+++.+++....++.++|.+-.-|. .+..+|.++|+++|+.++==
T Consensus 62 ~iPVf~tv~eA~~~-~~~-~~~~vifvp~~~a~da~lEa~~a~GIk~~VIiteGfpe---~d~~~l~~~Ar~~g~rlIGP 136 (608)
T PLN02522 62 AIPVHGSIEAACKA-HPT-ADVFINFASFRSAAASSMEALKQPTIRVVAIIAEGVPE---SDTKQLIAYARANNKVVIGP 136 (608)
T ss_pred CccccchHHHHHHh-CCC-CcEEEEeCChHHhHHHHHHHHhhCCCCEEEEECCCCCh---hhHHHHHHHHHHcCCEEECC
Confidence 35889988888753 222 46677788764 34555555524467777665544331 35789999999999998866
Q ss_pred CCCCCCCCCccCCCCeEE--EeC-CCCccccCccceEEEEEcCHHHHHHH
Q 013079 226 NTFSPLVLSPARLGADVV--VHS-ISKFISGGADIIAGAVCGPANLVNSM 272 (450)
Q Consensus 226 ~~~~~~~~~~~~~g~di~--~~S-~sK~~g~~g~~igG~l~~~~~~~~~l 272 (450)
++.+-+......++.-.- ... ..+.+. +|. + |++..+..+...+
T Consensus 137 Nc~Gii~p~~~kig~~~~~~~~~~~~~~~~-pG~-V-giVSqSGtL~~ei 183 (608)
T PLN02522 137 ATVGGIQAGAFKIGDTAGTLDNIIQCKLYR-PGS-V-GFVSKSGGMSNEM 183 (608)
T ss_pred CCCeeEccCcccccccccccccccCcCCCC-CCc-E-EEEeccHHHHHHH
Confidence 664322211112221110 001 134444 442 6 8888777665444
No 449
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=34.92 E-value=2.1e+02 Score=26.28 Aligned_cols=121 Identities=17% Similarity=0.239 Sum_probs=67.2
Q ss_pred eEEEecChHHHHHHHHHHHHHhccCCCEE---EE--eC-C---CchhHHHHHHHhCCCccCeeEEEeCCC-----CHHHH
Q 013079 116 AAYCTASDKAGMSAISSVLMQLCSSGGHV---VA--AR-T---LYGGTHALLTHFFPRACNITTTFVDIS-----DHEMV 181 (450)
Q Consensus 116 ~~~~tsg~~~gt~ai~~al~~l~~~gd~V---i~--~~-~---~y~~~~~~~~~~~~~~~g~~v~~v~~~-----d~~~l 181 (450)
-+.+.|| |-.++.++..+ .+.|-.| ++ +. + -|+....-+.....+.+|+++.+.+.. ..++|
T Consensus 3 ~~aL~SG---GKDS~~Al~~a-~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L 78 (223)
T COG2102 3 VIALYSG---GKDSFYALYLA-LEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEEL 78 (223)
T ss_pred EEEEEec---CcHHHHHHHHH-HHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHH
Confidence 3578899 77776555544 3445432 22 11 1 122111112233333478887776654 46677
Q ss_pred HHhhhcCCceEEEEecCCCCccccc---CHHHHHHHHHhcCCEEEEeCCCCCC-CCCcc-------CCCCeEEEeCCCCc
Q 013079 182 NSAIVQGRTKVLYFESISNPTLAVA---NIPELSRLAHDKGVTVVVDNTFSPL-VLSPA-------RLGADVVVHSISKF 250 (450)
Q Consensus 182 ~~ai~~~~t~lv~i~~~~NptG~v~---~l~~I~~la~~~gi~livD~~~~~~-~~~~~-------~~g~di~~~S~sK~ 250 (450)
.+++.+-+...|+ +|.+. ....+-.+|++.|+..+. ++ ..++. ..|.++++.+.+|.
T Consensus 79 ~~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~-----PLWg~d~~ell~e~~~~Gf~~~Iv~Vsa~ 146 (223)
T COG2102 79 KEALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVYA-----PLWGRDPEELLEEMVEAGFEAIIVAVSAE 146 (223)
T ss_pred HHHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEee-----cccCCCHHHHHHHHHHcCCeEEEEEEecc
Confidence 7777433445565 56663 577999999999987643 32 12332 23677777666665
Q ss_pred cc
Q 013079 251 IS 252 (450)
Q Consensus 251 ~g 252 (450)
.-
T Consensus 147 gL 148 (223)
T COG2102 147 GL 148 (223)
T ss_pred CC
Confidence 43
No 450
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=34.62 E-value=81 Score=28.35 Aligned_cols=36 Identities=19% Similarity=0.234 Sum_probs=28.0
Q ss_pred CCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 188 GRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 188 ~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
-++..|+++-. |+.|...+.+++.++|++||++++.
T Consensus 151 l~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 151 LSPVAVICEIL-DDDGDMARRDELEEFAKKHGLPIVS 186 (194)
T ss_dssp S-SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT-EEEE
T ss_pred CCCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 35667766654 5699999999999999999999874
No 451
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=34.44 E-value=4e+02 Score=25.07 Aligned_cols=97 Identities=10% Similarity=0.028 Sum_probs=52.2
Q ss_pred eEEEecChHHHHHHHHHHHHHhccCCCEEEEe--CCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEE
Q 013079 116 AAYCTASDKAGMSAISSVLMQLCSSGGHVVAA--RTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVL 193 (450)
Q Consensus 116 ~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~--~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv 193 (450)
.+++|-| .+..+...+.. .+++.+|++. +|.+.+. ..+..+. . .|++++++... .+...+ +++..|
T Consensus 88 dvILT~s---~S~~v~~~l~~-~~~~~~V~v~ESrP~~eG~-~~a~~L~-~-~GI~vtli~Ds---a~~~~m--~~vd~V 155 (253)
T PRK06372 88 SVIGTIS---SSQVLKAFISS-SEKIKSVYILESRPMLEGI-DMAKLLV-K-SGIDVVLLTDA---SMCEAV--LNVDAV 155 (253)
T ss_pred CEEEEeC---CcHHHHHHHHh-cCCCCEEEEecCCCchHHH-HHHHHHH-H-CCCCEEEEehh---HHHHHH--HhCCEE
Confidence 4777766 55555555533 2333466653 4766663 3443333 3 58999887522 233333 235555
Q ss_pred EEec-CCCCcccccC---HHHHHHHHHhcCCEEEE
Q 013079 194 YFES-ISNPTLAVAN---IPELSRLAHDKGVTVVV 224 (450)
Q Consensus 194 ~i~~-~~NptG~v~~---l~~I~~la~~~gi~liv 224 (450)
++-. .--..|.+.. -.-++-.|++++++|++
T Consensus 156 lvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 156 IVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred EECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 5521 1122343322 33667778999999887
No 452
>PRK13936 phosphoheptose isomerase; Provisional
Probab=34.44 E-value=3.4e+02 Score=24.23 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=24.3
Q ss_pred cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 187 QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 187 ~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
+++-.++.+.+ +|.-.++-++++.|+++|+.+|.
T Consensus 110 ~~~Dv~i~iS~----sG~t~~~~~~~~~ak~~g~~iI~ 143 (197)
T PRK13936 110 QPGDVLLAIST----SGNSANVIQAIQAAHEREMHVVA 143 (197)
T ss_pred CCCCEEEEEeC----CCCcHHHHHHHHHHHHCCCeEEE
Confidence 34444555533 56677789999999999988775
No 453
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=34.26 E-value=3.8e+02 Score=24.81 Aligned_cols=124 Identities=18% Similarity=0.174 Sum_probs=73.9
Q ss_pred CChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccC--eeEEEeC
Q 013079 97 FNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACN--ITTTFVD 174 (450)
Q Consensus 97 ~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g--~~v~~v~ 174 (450)
..|..-.+-..+.++++++.++-... ++|-+|+..|+. +.++.+|++.+....++.... .+... .| -+++++.
T Consensus 57 v~~d~g~fl~~li~~~~ak~~lelGv-fTGySaL~~Ala--lp~dGrv~a~eid~~~~~~~~-~~~k~-agv~~KI~~i~ 131 (237)
T KOG1663|consen 57 VGPDKGQFLQMLIRLLNAKRTLELGV-FTGYSALAVALA--LPEDGRVVAIEIDADAYEIGL-ELVKL-AGVDHKITFIE 131 (237)
T ss_pred cChHHHHHHHHHHHHhCCceEEEEec-ccCHHHHHHHHh--cCCCceEEEEecChHHHHHhH-HHHHh-ccccceeeeee
Confidence 45666778888888899887532211 115566666553 455678888776665554432 22221 33 3566666
Q ss_pred CCCHHHHHHhhhc--C-CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCCC
Q 013079 175 ISDHEMVNSAIVQ--G-RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 175 ~~d~~~l~~ai~~--~-~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~~ 228 (450)
..-.+.|.+.+++ . .-..+++.+- -.-.....+++.++.|. |-++++|++-
T Consensus 132 g~a~esLd~l~~~~~~~tfDfaFvDad--K~nY~~y~e~~l~Llr~-GGvi~~DNvl 185 (237)
T KOG1663|consen 132 GPALESLDELLADGESGTFDFAFVDAD--KDNYSNYYERLLRLLRV-GGVIVVDNVL 185 (237)
T ss_pred cchhhhHHHHHhcCCCCceeEEEEccc--hHHHHHHHHHHHhhccc-ccEEEEeccc
Confidence 6666666666633 2 2357777542 11122557788888864 7788999984
No 454
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=33.47 E-value=2.5e+02 Score=25.94 Aligned_cols=66 Identities=9% Similarity=0.201 Sum_probs=38.5
Q ss_pred eCCCCHHHHHHhhhcCCceEEEEecCCCCc--ccc-c-----CHHHHHHHHHhcC--CEEEEeCCCCCCCC----CccCC
Q 013079 173 VDISDHEMVNSAIVQGRTKVLYFESISNPT--LAV-A-----NIPELSRLAHDKG--VTVVVDNTFSPLVL----SPARL 238 (450)
Q Consensus 173 v~~~d~~~l~~ai~~~~t~lv~i~~~~Npt--G~v-~-----~l~~I~~la~~~g--i~livD~~~~~~~~----~~~~~ 238 (450)
-|.+.++.++..+ +....|.++++ ||- |.- . -++++.++.+++| +.+-+|.- +.. ...+.
T Consensus 126 nP~Tp~~~i~~~l--~~vD~VLiMtV-~PGfgGQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVDGG---I~~~ti~~l~~a 199 (228)
T PRK08091 126 CPETPISLLEPYL--DQIDLIQILTL-DPRTGTKAPSDLILDRVIQVENRLGNRRVEKLISIDGS---MTLELASYLKQH 199 (228)
T ss_pred CCCCCHHHHHHHH--hhcCEEEEEEE-CCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECC---CCHHHHHHHHHC
Confidence 3456888888877 35777777765 332 222 1 2445555555554 66888853 321 22345
Q ss_pred CCeEEE
Q 013079 239 GADVVV 244 (450)
Q Consensus 239 g~di~~ 244 (450)
|+|+++
T Consensus 200 GaD~~V 205 (228)
T PRK08091 200 QIDWVV 205 (228)
T ss_pred CCCEEE
Confidence 889776
No 455
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=33.39 E-value=3.5e+02 Score=24.35 Aligned_cols=92 Identities=16% Similarity=0.211 Sum_probs=51.8
Q ss_pred CeEEEecChHHHHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEE
Q 013079 115 EAAYCTASDKAGMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVL 193 (450)
Q Consensus 115 ~~~~~tsg~~~gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv 193 (450)
..+++..| |..|...+ ..|++.|-+|.+.+|........+. . .| ++.++... +.++ + ....+|
T Consensus 10 k~vlVvGg---G~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~---~--~~-~i~~~~~~~~~~d----l--~~~~lV 73 (205)
T TIGR01470 10 RAVLVVGG---GDVALRKA-RLLLKAGAQLRVIAEELESELTLLA---E--QG-GITWLARCFDADI----L--EGAFLV 73 (205)
T ss_pred CeEEEECc---CHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHH---H--cC-CEEEEeCCCCHHH----h--CCcEEE
Confidence 46778888 77765543 4566777777777776654333222 1 23 45554432 2222 3 123444
Q ss_pred EEecCCCCcccccCHHHHHHHHHhcCCEEE-EeCC
Q 013079 194 YFESISNPTLAVANIPELSRLAHDKGVTVV-VDNT 227 (450)
Q Consensus 194 ~i~~~~NptG~v~~l~~I~~la~~~gi~li-vD~~ 227 (450)
++ .++++ ..-+.|.+.|++.++++- +|+.
T Consensus 74 i~-at~d~----~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 74 IA-ATDDE----ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred EE-CCCCH----HHHHHHHHHHHHcCCEEEECCCc
Confidence 44 34433 123589999999998873 5654
No 456
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=33.07 E-value=3.8e+02 Score=26.04 Aligned_cols=84 Identities=20% Similarity=0.247 Sum_probs=49.4
Q ss_pred HHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEE--------ecCCCCccc
Q 013079 133 VLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYF--------ESISNPTLA 204 (450)
Q Consensus 133 al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i--------~~~~NptG~ 204 (450)
....|++.|-.|++.+....+....+.. .-.+...-|..|-+.|.+.+.+.++.+|+= |++.+|.-.
T Consensus 16 tv~~Ll~~G~~vvV~DNL~~g~~~~v~~-----~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Y 90 (329)
T COG1087 16 TVRQLLKTGHEVVVLDNLSNGHKIALLK-----LQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKY 90 (329)
T ss_pred HHHHHHHCCCeEEEEecCCCCCHHHhhh-----ccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHH
Confidence 3445677888888777777666665531 113455556668888888885555554432 333333221
Q ss_pred c----cCHHHHHHHHHhcCCE
Q 013079 205 V----ANIPELSRLAHDKGVT 221 (450)
Q Consensus 205 v----~~l~~I~~la~~~gi~ 221 (450)
. .---.|.+.|+++|+.
T Consensus 91 y~NNv~gTl~Ll~am~~~gv~ 111 (329)
T COG1087 91 YDNNVVGTLNLIEAMLQTGVK 111 (329)
T ss_pred HhhchHhHHHHHHHHHHhCCC
Confidence 1 1133677888888754
No 457
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=32.99 E-value=99 Score=26.21 Aligned_cols=49 Identities=16% Similarity=0.298 Sum_probs=37.5
Q ss_pred HHHHHhhhcCCce-EEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCC
Q 013079 179 EMVNSAIVQGRTK-VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 179 ~~l~~ai~~~~t~-lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~ 227 (450)
.++-+.+...+.. +|++--|-++-..-.|++.|.++|.-||+++-+.-+
T Consensus 63 qQIga~Ia~g~id~vIFf~DPl~~~phepDi~aLlRlc~v~nIP~AtN~a 112 (143)
T TIGR00160 63 QQIGALIAEGKIDAVIFFWDPLNAQPHEPDVKALLRLCTVWNIPLATNVA 112 (143)
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCCCcCHHHHHHHHHhhCcccccCHH
Confidence 3555555455554 677788888888899999999999999999866543
No 458
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=32.80 E-value=3.8e+02 Score=24.35 Aligned_cols=79 Identities=9% Similarity=0.146 Sum_probs=49.1
Q ss_pred EEEEeCC--CchhHH-HHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc
Q 013079 143 HVVAART--LYGGTH-ALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK 218 (450)
Q Consensus 143 ~Vi~~~~--~y~~~~-~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~ 218 (450)
+|++..+ +.|..- ..+..++.. .|+++.++..+ .++++.+++.+.++.+|.+....+ -....++++.+..++.
T Consensus 90 ~vvl~t~~gd~HdiG~~iv~~~l~~-~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~--~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 90 KIVLATVKGDVHDIGKNLVGVILSN-NGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLV--PSLDEMVEVAEEMNRR 166 (213)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHh-CCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchh--ccHHHHHHHHHHHHhc
Confidence 5554332 344332 333344444 79999998765 678888877567888888765433 2355677877777776
Q ss_pred C--CEEEE
Q 013079 219 G--VTVVV 224 (450)
Q Consensus 219 g--i~liv 224 (450)
+ +.+++
T Consensus 167 ~~~~~i~v 174 (213)
T cd02069 167 GIKIPLLI 174 (213)
T ss_pred CCCCeEEE
Confidence 3 44444
No 459
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=32.32 E-value=1.9e+02 Score=20.70 Aligned_cols=58 Identities=7% Similarity=-0.009 Sum_probs=32.1
Q ss_pred hCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEe
Q 013079 161 FFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 161 ~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD 225 (450)
++.+ .|+++..+... .+.+. ..+..+|++....+.+- -.++++|.++.++=|-+|++|
T Consensus 13 ~L~~-~g~~v~~~~~~-~~~l~----~~~~tll~i~~~~~~~~-~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 13 LLEE-QGVKVERWRKP-YEALE----ADDGTLLVIGPDLRLSE-PEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHH-CCCeeEEeccc-HHHhC----CCCCEEEEEeCCCCCCc-hHHHHHHHHHHHcCCEEEEeC
Confidence 3344 58888765432 33332 23444555543323221 356789999998766666654
No 460
>PRK08246 threonine dehydratase; Provisional
Probab=32.30 E-value=1.3e+02 Score=29.14 Aligned_cols=83 Identities=13% Similarity=0.015 Sum_probs=45.1
Q ss_pred hhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHH
Q 013079 79 MFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHAL 157 (450)
Q Consensus 79 ~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~ 157 (450)
+++.+.-||.++|.. |. ....+.... .+...++..++ |..++.++..+- +.-.-+|+++...-......
T Consensus 40 ~~K~E~~nptGS~K~-R~---a~~~~~~~~---~~~~~vv~aSs---GN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~ 109 (310)
T PRK08246 40 WLKLEHLQHTGSFKA-RG---AFNRLLAAP---VPAAGVVAASG---GNAGLAVAYAAAALGVPATVFVPETAPPAKVAR 109 (310)
T ss_pred EEEECCCCCCCCCHH-HH---HHHHHHhhc---ccCCeEEEeCC---CHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHH
Confidence 455666777665432 21 122222211 14556777788 888888777543 22234666665543333333
Q ss_pred HHHhCCCccCeeEEEeCCC
Q 013079 158 LTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~ 176 (450)
++ .+|.++..++.+
T Consensus 110 ~~-----~~GA~V~~~~~~ 123 (310)
T PRK08246 110 LR-----ALGAEVVVVGAE 123 (310)
T ss_pred HH-----HCCCEEEEeCCC
Confidence 32 378899888753
No 461
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=32.28 E-value=5.4e+02 Score=25.91 Aligned_cols=80 Identities=11% Similarity=0.155 Sum_probs=46.6
Q ss_pred EeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhc-CCceEEEEecCCCCcccccCHHHHHHHHHhc----CC
Q 013079 146 AARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDK----GV 220 (450)
Q Consensus 146 ~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~-~~t~lv~i~~~~NptG~v~~l~~I~~la~~~----gi 220 (450)
..++.-.+....+..+... .|+++..+ .+.+++.+++.. .+..+|+|.++.-.......+.++.++.+.. .+
T Consensus 213 t~Dt~R~aa~eQL~~~a~~-lgvpv~~~--~~~~~l~~~L~~~~~~DlVLIDTaGr~~~~~~~l~el~~~l~~~~~~~e~ 289 (388)
T PRK12723 213 TIDNYRIGAKKQIQTYGDI-MGIPVKAI--ESFKDLKEEITQSKDFDLVLVDTIGKSPKDFMKLAEMKELLNACGRDAEF 289 (388)
T ss_pred eccCccHHHHHHHHHHhhc-CCcceEee--CcHHHHHHHHHHhCCCCEEEEcCCCCCccCHHHHHHHHHHHHhcCCCCeE
Confidence 3444334445555555443 67766543 366777766522 4567899887643333333466777766642 57
Q ss_pred EEEEeCCC
Q 013079 221 TVVVDNTF 228 (450)
Q Consensus 221 ~livD~~~ 228 (450)
++|+|++.
T Consensus 290 ~LVlsat~ 297 (388)
T PRK12723 290 HLAVSSTT 297 (388)
T ss_pred EEEEcCCC
Confidence 78888875
No 462
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=32.25 E-value=3.5e+02 Score=23.78 Aligned_cols=85 Identities=19% Similarity=0.121 Sum_probs=43.0
Q ss_pred HHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHH
Q 013079 135 MQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRL 214 (450)
Q Consensus 135 ~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~l 214 (450)
..+.+.|.+|++..............+..+ .+..+..++..+.+++.+++ . +..+|+..++ .|...+ .+.+.
T Consensus 46 ~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~-~~diVi~at~---~g~~~~--~~~~~ 117 (194)
T cd01078 46 VLLAREGARVVLVGRDLERAQKAADSLRAR-FGEGVGAVETSDDAARAAAI-K-GADVVFAAGA---AGVELL--EKLAW 117 (194)
T ss_pred HHHHHCCCEEEEEcCCHHHHHHHHHHHHhh-cCCcEEEeeCCCHHHHHHHH-h-cCCEEEECCC---CCceec--hhhhc
Confidence 344556667766554433333333222212 35566666667888888877 3 3455554333 333211 11111
Q ss_pred HHhcCCEEEEeCCC
Q 013079 215 AHDKGVTVVVDNTF 228 (450)
Q Consensus 215 a~~~gi~livD~~~ 228 (450)
+. ....+++|-.+
T Consensus 118 ~~-~~~~vv~D~~~ 130 (194)
T cd01078 118 AP-KPLAVAADVNA 130 (194)
T ss_pred cc-CceeEEEEccC
Confidence 11 12568999887
No 463
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=31.96 E-value=1.5e+02 Score=28.59 Aligned_cols=111 Identities=13% Similarity=0.176 Sum_probs=58.1
Q ss_pred CCCchhHHHHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeC
Q 013079 148 RTLYGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDN 226 (450)
Q Consensus 148 ~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~ 226 (450)
-++|++....-... . ...-+..+|.. -++.++++. ...++.++|-+..-+ .++-++|.++|+++|+.++==+
T Consensus 51 ~~~y~sv~dlp~~~--~-~DlAvi~vp~~~v~~~l~e~~-~~gvk~avI~s~Gf~---~~~~~~l~~~a~~~girvlGPN 123 (291)
T PRK05678 51 LPVFNTVAEAVEAT--G-ANASVIYVPPPFAADAILEAI-DAGIDLIVCITEGIP---VLDMLEVKAYLERKKTRLIGPN 123 (291)
T ss_pred eeccCCHHHHhhcc--C-CCEEEEEcCHHHHHHHHHHHH-HCCCCEEEEECCCCC---HHHHHHHHHHHHHcCCEEECCC
Confidence 34566555443200 0 23445555543 356677777 667777666544322 2334599999999999998665
Q ss_pred CCCCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHHH
Q 013079 227 TFSPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMM 273 (450)
Q Consensus 227 ~~~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l~ 273 (450)
+++-+ ++.. + ...++.-..-.+| .+ +++.-+..+...+.
T Consensus 124 c~Gi~--~~~~-~---~~~~~~~~~~~~G-~v-aliSQSGal~~~~~ 162 (291)
T PRK05678 124 CPGII--TPGE-C---KIGIMPGHIHKKG-RV-GVVSRSGTLTYEAV 162 (291)
T ss_pred CCccc--cccc-c---eeeecCCCCCCCC-CE-EEEeccHHHHHHHH
Confidence 54322 2211 1 1111221122234 35 77777766555443
No 464
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=31.82 E-value=38 Score=35.14 Aligned_cols=31 Identities=13% Similarity=0.198 Sum_probs=27.7
Q ss_pred CCCCcccccCHHHHHHHHHhcCCEEEEeCCC
Q 013079 198 ISNPTLAVANIPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 198 ~~NptG~v~~l~~I~~la~~~gi~livD~~~ 228 (450)
+....|+..+++++++.||++|+.||+|-|+
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 4455788899999999999999999999997
No 465
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=31.81 E-value=30 Score=32.79 Aligned_cols=31 Identities=23% Similarity=0.361 Sum_probs=27.5
Q ss_pred CCCCcccccCHHHHHHHHHhcCCEEEEeCCC
Q 013079 198 ISNPTLAVANIPELSRLAHDKGVTVVVDNTF 228 (450)
Q Consensus 198 ~~NptG~v~~l~~I~~la~~~gi~livD~~~ 228 (450)
++...|+..+++++++.||++|+.||+|-+.
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cccccchhhhhhhhhhccccccceEEEeeec
Confidence 4556788889999999999999999999886
No 466
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=31.71 E-value=3.8e+02 Score=26.33 Aligned_cols=84 Identities=12% Similarity=0.073 Sum_probs=44.4
Q ss_pred hccCCC--EEEEeC--CCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEec-CCCCccccc-C--H
Q 013079 137 LCSSGG--HVVAAR--TLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFES-ISNPTLAVA-N--I 208 (450)
Q Consensus 137 l~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~-~~NptG~v~-~--l 208 (450)
..+.|. +|++.. |...+.......+. . .|++++.+... .+...+.+.++..|++-. ---..|.+. . -
T Consensus 164 A~~~gk~f~V~v~EsRP~~qG~rlta~eL~-~-~GI~vtlI~Ds---a~~~~M~~~~Vd~VivGAd~I~aNG~v~NKiGT 238 (329)
T PRK06371 164 AHRNGKNIFVFVDETRPRLQGARLTAWELA-Q-EGIDHAIIADN---AAGYFMRKKEIDLVIVGADRIASNGDFANKIGT 238 (329)
T ss_pred HHHcCCeeEEEECCCCCcchHHHHHHHHHH-H-CCCCEEEEccc---HHHHHhhhcCCCEEEECccEEecCCCEeehhhH
Confidence 334444 566644 76666543332332 2 59999887422 222333233566666521 112223332 2 3
Q ss_pred HHHHHHHHhcCCEEEEe
Q 013079 209 PELSRLAHDKGVTVVVD 225 (450)
Q Consensus 209 ~~I~~la~~~gi~livD 225 (450)
--|+-+||.+|++|++=
T Consensus 239 ~~lAl~Ak~~~VPfyV~ 255 (329)
T PRK06371 239 YEKAVLAKVNGIPFYVA 255 (329)
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 36778889999999874
No 467
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=31.63 E-value=4.4e+02 Score=24.72 Aligned_cols=22 Identities=14% Similarity=0.030 Sum_probs=17.8
Q ss_pred cccccCHHHHHHHHHhcCCEEE
Q 013079 202 TLAVANIPELSRLAHDKGVTVV 223 (450)
Q Consensus 202 tG~v~~l~~I~~la~~~gi~li 223 (450)
.|...++.++++.|+++|+.+|
T Consensus 185 sg~~~~~~~~~~~ak~~ga~iI 206 (278)
T PRK11557 185 SGERRELNLAADEALRVGAKVL 206 (278)
T ss_pred CCCCHHHHHHHHHHHHcCCCEE
Confidence 5777788899999999976655
No 468
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=31.58 E-value=1.1e+02 Score=27.64 Aligned_cols=35 Identities=20% Similarity=0.251 Sum_probs=28.6
Q ss_pred CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 189 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 189 ~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
.+..|+++- -|+.|...+.+++.++|++|+++++.
T Consensus 157 ~p~~vicEi-l~~dG~m~~~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 157 KPAGVICEM-MNDDGTMARKPELMEYAKKHNLKLIS 191 (199)
T ss_pred CceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcEEE
Confidence 356666665 46689999999999999999999864
No 469
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=31.45 E-value=1.1e+02 Score=28.29 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=28.5
Q ss_pred CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 189 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 189 ~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
.+..|+++- -|+.|.....+++.++|++||++++.
T Consensus 172 ~P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~iis 206 (230)
T PRK00014 172 RPAGVLCEL-MNADGTMMRGASLERYAAKEGLVALA 206 (230)
T ss_pred CceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcEEE
Confidence 456666665 56789999999999999999998863
No 470
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=30.92 E-value=3e+02 Score=27.92 Aligned_cols=75 Identities=13% Similarity=0.122 Sum_probs=42.3
Q ss_pred CCCEEEEeCCCchhHH-HH---HHH-hCCCccCeeEEE-eCC---CCHHHHHHhhhcCCceEEEEecCCCCcccccCHHH
Q 013079 140 SGGHVVAARTLYGGTH-AL---LTH-FFPRACNITTTF-VDI---SDHEMVNSAIVQGRTKVLYFESISNPTLAVANIPE 210 (450)
Q Consensus 140 ~gd~Vi~~~~~y~~~~-~~---~~~-~~~~~~g~~v~~-v~~---~d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~ 210 (450)
+||.|+.+.+..++.. .. +.. .+.+ .|+++.+ +.. .+.++|...+..-+++.++. + .|....+.+
T Consensus 318 ~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ip--v---Hge~~~~~~ 391 (422)
T TIGR00649 318 KGDTVVFSAPPIPGNENIAVSILLDIRLNE-VGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIP--V---HGEYRMLIN 391 (422)
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHHHh-cCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEe--c---CCcHHHHHH
Confidence 6788998887777765 11 112 2333 5666533 222 15566665552224554442 2 255556777
Q ss_pred HHHHHHhcCC
Q 013079 211 LSRLAHDKGV 220 (450)
Q Consensus 211 I~~la~~~gi 220 (450)
.++++++.|+
T Consensus 392 ~~~~a~~~g~ 401 (422)
T TIGR00649 392 HTKLAEEEGY 401 (422)
T ss_pred HHHHHHHcCC
Confidence 8888887775
No 471
>PLN02672 methionine S-methyltransferase
Probab=30.52 E-value=3.8e+02 Score=31.02 Aligned_cols=122 Identities=12% Similarity=0.067 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHHHHHhccC---CCEEEEeCCCchhHHHHHHHh----CCCc
Q 013079 101 VLNLSRQMAALEG--------TEAAYCTASDKAGMSAISSVLMQLCSS---GGHVVAARTLYGGTHALLTHF----FPRA 165 (450)
Q Consensus 101 ~~~l~~~iA~l~g--------~~~~~~tsg~~~gt~ai~~al~~l~~~---gd~Vi~~~~~y~~~~~~~~~~----~~~~ 165 (450)
...+|..||.++. .+++++.++ -..|+..+++.+... =|.- .+.....-+...+... ...
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 502 (1082)
T PLN02672 428 SKRFRNLIAGFMRIYHHIPLTPDNVVVFPS---RAVAIENALRLFSPRLAIVDEH-LTRWLPKKWLTSLAIENATSDSK- 502 (1082)
T ss_pred chHHHHHHHHHHHHhcCCcCCccceEEecc---HHHHHHHHHHhhChHHHhhhhh-hhccCCHHHHhHhhhhcccccCc-
Confidence 4678888888764 467889999 889998888754210 1111 2222222333322211 011
Q ss_pred cCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCC
Q 013079 166 CNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 166 ~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~ 227 (450)
.+..++.+..+ .-+.+.+.+.+-++++|+..-...+.-+..-.+.|.+.+++.|+.++.|..
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 503 SDDVITVIEAPRQSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred cCCeEEEEeCCCcchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 22333333322 223455556445778887655555544455688999999999999999986
No 472
>COG4472 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.41 E-value=1.2e+02 Score=22.78 Aligned_cols=34 Identities=12% Similarity=0.259 Sum_probs=25.8
Q ss_pred CCCCCeEEEEeCCCCCHHHHHHHHHHHHHHhhhcC
Q 013079 412 GISAGLVRMSVGYLGTLDQRWSQFEKALSRMQDSG 446 (450)
Q Consensus 412 g~~~~~iRiS~g~~~~~~~~i~~l~~al~~~~~~~ 446 (450)
+..+.++||-++ ..+.++.-+.|.++...+.+++
T Consensus 2 ~~~D~T~~f~~~-d~~~~~v~e~L~~VY~sL~ekG 35 (88)
T COG4472 2 EFTDETMRFDVG-DSDKKDVKETLNDVYNSLEEKG 35 (88)
T ss_pred CcccceeeeecC-CChHHHHHHHHHHHHHHHHHcC
Confidence 455789999999 8777777777888777776543
No 473
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=29.98 E-value=1.1e+02 Score=30.09 Aligned_cols=71 Identities=15% Similarity=0.297 Sum_probs=48.7
Q ss_pred CCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHH---HhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 148 RTLYGGTHALLTHFFPRACNITTTFVDISDHEMVN---SAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 148 ~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~---~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
.-.|+++.+++. . -.+++.++...++...+ -++ .+-|-|++|.|- .-.+.+.++|.+.|+++| .++.
T Consensus 58 ~k~y~syEeLak----d-~~vDvVyi~~~~~qH~evv~l~l--~~~K~VL~EKPl--a~n~~e~~~iveaA~~rg-v~~m 127 (351)
T KOG2741|consen 58 PKAYGSYEELAK----D-PEVDVVYISTPNPQHYEVVMLAL--NKGKHVLCEKPL--AMNVAEAEEIVEAAEARG-VFFM 127 (351)
T ss_pred CccccCHHHHhc----C-CCcCEEEeCCCCccHHHHHHHHH--HcCCcEEecccc--cCCHHHHHHHHHHHHHcC-cEEE
Confidence 345777776664 1 45788888877554433 233 345568888874 345678999999999999 6777
Q ss_pred eCCC
Q 013079 225 DNTF 228 (450)
Q Consensus 225 D~~~ 228 (450)
|..+
T Consensus 128 eg~~ 131 (351)
T KOG2741|consen 128 EGLW 131 (351)
T ss_pred eeee
Confidence 8876
No 474
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=29.96 E-value=45 Score=35.24 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=30.1
Q ss_pred cCCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCC
Q 013079 197 SISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPL 231 (450)
Q Consensus 197 ~~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~ 231 (450)
.|....|+..+++++++.||++|+-||+|-++.++
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~ 185 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHF 185 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCC
Confidence 45667788889999999999999999999998544
No 475
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=29.76 E-value=91 Score=27.94 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=26.9
Q ss_pred EEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 192 VLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 192 lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
+|.++--+|..|.+.|++.-+++++++|+.+++
T Consensus 115 vILLTDG~n~~~~i~P~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 115 VIVLSDANLERYGIQPKKLADALAREPNVNAFV 147 (191)
T ss_pred EEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEE
Confidence 455666777889999988788999999998775
No 476
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=29.60 E-value=1.9e+02 Score=27.67 Aligned_cols=68 Identities=12% Similarity=0.219 Sum_probs=40.5
Q ss_pred CCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC-C-----C---CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHH
Q 013079 141 GGHVVAARTLYGGTHALLTHFFPRACNITTTFVD-I-----S---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPEL 211 (450)
Q Consensus 141 gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~-~-----~---d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I 211 (450)
+..+++..+.|.-. ++ .+|+++..+- . . ++.++.+.++..++++|+.+.-.++ +.+
T Consensus 177 ~~~~v~~H~af~Y~---~~-----~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 241 (287)
T cd01137 177 KRKLVTSEGAFSYF---AK-----AYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVND-------RLM 241 (287)
T ss_pred cCEEEEecccHHHH---HH-----HcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCh-------HHH
Confidence 44677776655522 22 2566654421 1 1 4566666665568899988765443 455
Q ss_pred HHHHHhcCCEEE
Q 013079 212 SRLAHDKGVTVV 223 (450)
Q Consensus 212 ~~la~~~gi~li 223 (450)
..++++.|+.++
T Consensus 242 ~~ia~~~gv~v~ 253 (287)
T cd01137 242 KQVAKETGAKIG 253 (287)
T ss_pred HHHHHHhCCccc
Confidence 677888888753
No 477
>PRK07048 serine/threonine dehydratase; Validated
Probab=29.15 E-value=2.5e+02 Score=27.23 Aligned_cols=85 Identities=14% Similarity=0.030 Sum_probs=43.6
Q ss_pred hhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHH
Q 013079 79 MFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHAL 157 (450)
Q Consensus 79 ~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~ 157 (450)
+++.++-||.++|.. |.+...+..+. .+ .+...++..++ |..+..++..+- +.-.-+|+++...-..-...
T Consensus 42 ~~K~E~~nptGS~K~-R~a~~~i~~~~---~~-~~~~~vv~aSs---GN~g~alA~~a~~~G~~~~vvvp~~~~~~k~~~ 113 (321)
T PRK07048 42 FFKCENFQRMGAFKF-RGAYNALSQFS---PE-QRRAGVVTFSS---GNHAQAIALSARLLGIPATIVMPQDAPAAKVAA 113 (321)
T ss_pred EEEeccCCCCCCeeH-HHHHHHHHhhh---Hh-hcCCcEEEeCC---CHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 456667777665533 22222222222 11 13344566666 777777766542 22223566665443333333
Q ss_pred HHHhCCCccCeeEEEeCCC
Q 013079 158 LTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~ 176 (450)
++ .+|.++..++..
T Consensus 114 ~~-----~~GAeV~~~~~~ 127 (321)
T PRK07048 114 TR-----GYGGEVVTYDRY 127 (321)
T ss_pred HH-----HCCCEEEEECCC
Confidence 32 379999998753
No 478
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=29.02 E-value=1.3e+02 Score=27.60 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=28.4
Q ss_pred CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 189 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 189 ~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
.+..|+++- -|+.|...+.+++.++|++||++++.
T Consensus 168 ~p~~vicEi-l~~dG~ma~~~~l~~fA~~h~l~~is 202 (218)
T PRK00910 168 QPAGVLCEL-TNPDGTMAKTPEIIAFGKLHNMPVLT 202 (218)
T ss_pred CceEEEEEE-ecCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 356666665 45679999999999999999999863
No 479
>PLN02970 serine racemase
Probab=28.97 E-value=4.5e+02 Score=25.59 Aligned_cols=85 Identities=12% Similarity=0.062 Sum_probs=45.7
Q ss_pred hhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHhc-cCCCEEEEeCCCchhHHHH
Q 013079 79 MFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQLC-SSGGHVVAARTLYGGTHAL 157 (450)
Q Consensus 79 ~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l~-~~gd~Vi~~~~~y~~~~~~ 157 (450)
+++.++.||.++|.. | .....++....+ .+...++..++ |..++.++..+-. .-.-+|+++......-...
T Consensus 45 ~~K~E~~nptGSfKd-R---ga~~~i~~~~~~-~~~~~vv~aSs---GN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 116 (328)
T PLN02970 45 FFKCECFQKGGAFKF-R---GACNAIFSLSDD-QAEKGVVTHSS---GNHAAALALAAKLRGIPAYIVVPKNAPACKVDA 116 (328)
T ss_pred EEEecCCCCCCCcHH-H---HHHHHHHHhhHh-hcCCeEEEECC---cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 346667777765422 1 112222221111 12345677777 8888887775532 2223566666544443443
Q ss_pred HHHhCCCccCeeEEEeCCC
Q 013079 158 LTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~ 176 (450)
++ .+|.+++.++.+
T Consensus 117 ~~-----~~GA~Vi~~~~~ 130 (328)
T PLN02970 117 VI-----RYGGIITWCEPT 130 (328)
T ss_pred HH-----hcCCEEEEeCCC
Confidence 33 379999998754
No 480
>PLN02379 pfkB-type carbohydrate kinase family protein
Probab=28.65 E-value=3.5e+02 Score=26.89 Aligned_cols=36 Identities=25% Similarity=0.235 Sum_probs=23.4
Q ss_pred CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCC
Q 013079 189 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 189 ~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~ 227 (450)
+.++++++....+ ..-+.++.+.|+++|+.+++|-.
T Consensus 177 ~~~~v~v~~~~~~---~~~~~~~~~~A~~~g~~v~lD~s 212 (367)
T PLN02379 177 GSKWLVLRYGFYN---LEVIEAAIRLAKQEGLSVSLDLA 212 (367)
T ss_pred cCCEEEEEcccCC---HHHHHHHHHHHHHcCCEEEEecc
Confidence 4677777732111 12366778888888999988853
No 481
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=28.60 E-value=4.6e+02 Score=24.82 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=22.5
Q ss_pred cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 187 QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 187 ~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
+++.-+|++.. .|...++.++++.|+++|+.+|.
T Consensus 186 ~~~Dl~I~iS~----sG~t~~~~~~~~~ak~~g~~ii~ 219 (292)
T PRK11337 186 QEGDVVLVVSH----SGRTSDVIEAVELAKKNGAKIIC 219 (292)
T ss_pred CCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCeEEE
Confidence 33444444432 46666788999999999876653
No 482
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=28.55 E-value=2.5e+02 Score=22.35 Aligned_cols=61 Identities=11% Similarity=0.143 Sum_probs=38.2
Q ss_pred cCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhc--CCEEEEeCCC
Q 013079 166 CNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDK--GVTVVVDNTF 228 (450)
Q Consensus 166 ~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~--gi~livD~~~ 228 (450)
.|+++.++... ..+++.+.+...++++|.++...-. ....++.+.++.+++ ++.+++=...
T Consensus 26 ~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~~~--~~~~~~~~~~~~~~~p~~~~ivvGG~~ 89 (125)
T cd02065 26 NGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALSTT--HMEAMKLVIEALKELGIDIPVVVGGAH 89 (125)
T ss_pred CCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecchHh--HHHHHHHHHHHHHhcCCCCeEEEeCCc
Confidence 69999887654 4566666664667888887543211 224456666666666 4887776543
No 483
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.52 E-value=4.4e+02 Score=24.70 Aligned_cols=69 Identities=12% Similarity=0.178 Sum_probs=39.3
Q ss_pred CCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-------CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHH
Q 013079 141 GGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-------DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSR 213 (450)
Q Consensus 141 gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-------d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~ 213 (450)
+..+++..+.|. .+++ .+|+++..+... ++.++.+.+++.+.++|+.+.-.++ +.+-.
T Consensus 170 ~~~~v~~H~af~---Y~~~-----~ygl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 234 (266)
T cd01018 170 QRAFMVYHPAWG---YFAR-----DYGLTQIPIEEEGKEPSPADLKRLIDLAKEKGVRVVFVQPQFST-------KSAEA 234 (266)
T ss_pred CCeEEEECchhH---HHHH-----HcCCEEEecCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCc-------HHHHH
Confidence 456777665553 2222 257665543211 4556666665567888888743332 23447
Q ss_pred HHHhcCCEEEE
Q 013079 214 LAHDKGVTVVV 224 (450)
Q Consensus 214 la~~~gi~liv 224 (450)
++++.|+.++.
T Consensus 235 la~~~g~~v~~ 245 (266)
T cd01018 235 IAREIGAKVVT 245 (266)
T ss_pred HHHHcCCeEEE
Confidence 77888887654
No 484
>PLN02591 tryptophan synthase
Probab=28.35 E-value=5e+02 Score=24.32 Aligned_cols=84 Identities=17% Similarity=0.134 Sum_probs=50.9
Q ss_pred ccCC-CEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC-CC-CHHHHHHhhhcCCceEEEEecCCCCcccc----cCHHH
Q 013079 138 CSSG-GHVVAARTLYGGTHALLTHFFPRACNITTTFVD-IS-DHEMVNSAIVQGRTKVLYFESISNPTLAV----ANIPE 210 (450)
Q Consensus 138 ~~~g-d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~-~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v----~~l~~ 210 (450)
.+.| |-+|+++..+........ .+.+ .|+...++- +. +.+.+++.. ......||+-+....||.- ..+++
T Consensus 103 ~~aGv~GviipDLP~ee~~~~~~-~~~~-~gl~~I~lv~Ptt~~~ri~~ia-~~~~gFIY~Vs~~GvTG~~~~~~~~~~~ 179 (250)
T PLN02591 103 KEAGVHGLVVPDLPLEETEALRA-EAAK-NGIELVLLTTPTTPTERMKAIA-EASEGFVYLVSSTGVTGARASVSGRVES 179 (250)
T ss_pred HHcCCCEEEeCCCCHHHHHHHHH-HHHH-cCCeEEEEeCCCCCHHHHHHHH-HhCCCcEEEeeCCCCcCCCcCCchhHHH
Confidence 3445 789998877765544442 2233 577665542 33 445566554 5556778887777778864 34667
Q ss_pred HHHHHHhc-CCEEEE
Q 013079 211 LSRLAHDK-GVTVVV 224 (450)
Q Consensus 211 I~~la~~~-gi~liv 224 (450)
+.+.+|++ ++++++
T Consensus 180 ~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 180 LLQELKEVTDKPVAV 194 (250)
T ss_pred HHHHHHhcCCCceEE
Confidence 66666664 666655
No 485
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=28.34 E-value=3.1e+02 Score=26.18 Aligned_cols=116 Identities=18% Similarity=0.290 Sum_probs=70.3
Q ss_pred CEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC-CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCC
Q 013079 142 GHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS-DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGV 220 (450)
Q Consensus 142 d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~-d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi 220 (450)
...+..-|-|..+.+.++.. . .+..+.|||.. -.|++.+++ +...++|++-+-+=| +.|.-++.+.+++.|.
T Consensus 45 G~~~~g~PVf~tV~EA~~~~--~-a~~svI~Vp~~~aadai~EAi-da~i~liv~ITEgIP---~~D~~~~~~~a~~~g~ 117 (293)
T COG0074 45 GQTILGLPVFNTVEEAVKET--G-ANASVIFVPPPFAADAILEAI-DAGIKLVVIITEGIP---VLDMLELKRYAREKGT 117 (293)
T ss_pred ceEEcCccHHHHHHHHHHhh--C-CCEEEEecCcHHHHHHHHHHH-hCCCcEEEEEeCCCC---HHHHHHHHHHHHhcCC
Confidence 35556678888888887644 2 46788888765 556777888 555677666543322 4677789999999998
Q ss_pred EEEEeCCCCCCCCCccCCCCeEEEeCCCCccccCccceEEEEEcCHHHHHHH
Q 013079 221 TVVVDNTFSPLVLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSM 272 (450)
Q Consensus 221 ~livD~~~~~~~~~~~~~g~di~~~S~sK~~g~~g~~igG~l~~~~~~~~~l 272 (450)
.++==++-+-+ .|.....-++ -++.+- +|. + |++..+..+...+
T Consensus 118 ~iiGPncpGiI--~Pg~~kiGim---p~~i~~-~G~-I-GiVSrSGTLTyE~ 161 (293)
T COG0074 118 RLIGPNCPGII--TPGECKIGIM---PGNIYK-PGN-I-GIVSRSGTLTYEA 161 (293)
T ss_pred EEECCCCCccC--cCCcceeeec---hhhhcc-CCc-e-EEEecCcchHHHH
Confidence 88765543211 2211101111 345555 443 6 8887776554333
No 486
>PRK15482 transcriptional regulator MurR; Provisional
Probab=28.25 E-value=5e+02 Score=24.50 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=23.0
Q ss_pred cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEE
Q 013079 187 QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVV 223 (450)
Q Consensus 187 ~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~li 223 (450)
+++.-+|.+.. .|...++.++++.|+++|+.+|
T Consensus 181 ~~~Dv~i~iS~----sg~t~~~~~~~~~a~~~g~~iI 213 (285)
T PRK15482 181 KKGDVQIAISY----SGSKKEIVLCAEAARKQGATVI 213 (285)
T ss_pred CCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEE
Confidence 34444555533 4677788899999999987765
No 487
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=28.12 E-value=1.3e+02 Score=27.39 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=28.4
Q ss_pred CceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 189 RTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 189 ~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
.+..|+++- -|..|...+.+++.++|++||++++.
T Consensus 167 ~p~~vicEi-l~~dG~ma~~~~~~~fA~~~~l~~is 201 (214)
T PRK01792 167 KEAGVICEI-TNDDGTMARTPEIVEFAKKFGYAVVT 201 (214)
T ss_pred CceEEEEEE-ecCCCCccCHHHHHHHHHHcCCcEEE
Confidence 356666665 46779999999999999999999864
No 488
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=28.11 E-value=1.4e+02 Score=22.58 Aligned_cols=46 Identities=22% Similarity=0.303 Sum_probs=31.9
Q ss_pred HHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCC
Q 013079 178 HEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 178 ~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~ 227 (450)
.++..+++++.+.++|++..-..| .-.+.|..+|++++++++.-.+
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~----~~~~~i~~~c~~~~Vp~~~~~s 61 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVAEDADP----RLTEKVEALANEKGVPVSKVDS 61 (82)
T ss_pred HHHHHHHHHcCCeeEEEEECCCCH----HHHHHHHHHHHHcCCCEEEECC
Confidence 356667775678888888543222 2356888999999999876543
No 489
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=27.96 E-value=4e+02 Score=25.28 Aligned_cols=58 Identities=17% Similarity=0.194 Sum_probs=30.6
Q ss_pred HHHHHHHHH-HHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC--CHHHHHHh
Q 013079 126 GMSAISSVL-MQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS--DHEMVNSA 184 (450)
Q Consensus 126 gt~ai~~al-~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~--d~~~l~~a 184 (450)
++.+|-..+ ..+.+.|.+++...-.-.-......++..+ .|+++..++.| |++++++.
T Consensus 14 ASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~-~~v~v~vi~~DLs~~~~~~~l 74 (265)
T COG0300 14 ASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK-TGVEVEVIPADLSDPEALERL 74 (265)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh-hCceEEEEECcCCChhHHHHH
Confidence 556665544 456677776665544434344444444443 46666555444 55555543
No 490
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=27.82 E-value=42 Score=35.95 Aligned_cols=34 Identities=15% Similarity=0.438 Sum_probs=28.0
Q ss_pred CCCCcccccCHHHHHHHHHhcCCEEEEeCCCCCC
Q 013079 198 ISNPTLAVANIPELSRLAHDKGVTVVVDNTFSPL 231 (450)
Q Consensus 198 ~~NptG~v~~l~~I~~la~~~gi~livD~~~~~~ 231 (450)
|+.+++.+.+++++++.||++|+-||+|-|+.+.
T Consensus 221 p~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~ 254 (605)
T TIGR02104 221 PYDPATRIRELKQMIQALHENGIRVIMDVVYNHT 254 (605)
T ss_pred CCccchHHHHHHHHHHHHHHCCCEEEEEEEcCCc
Confidence 4555666788999999999999999999998443
No 491
>PRK06036 translation initiation factor IF-2B subunit alpha; Provisional
Probab=27.75 E-value=4.2e+02 Score=26.14 Aligned_cols=82 Identities=23% Similarity=0.306 Sum_probs=45.8
Q ss_pred hccCCC--EEEE--eCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEe--cC-CCCcccccCH-
Q 013079 137 LCSSGG--HVVA--ARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFE--SI-SNPTLAVANI- 208 (450)
Q Consensus 137 l~~~gd--~Vi~--~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~--~~-~NptG~v~~l- 208 (450)
..+.|. +|++ ++|...+.......+. + .|++++.+. | ..+...+.+.+...|++- .+ .| |.+..+
T Consensus 175 A~~~gk~~~V~v~EtRP~~qG~rlta~eL~-~-~GI~vtlI~--D-sa~~~~M~~~~Vd~VivGAd~I~an--Gv~NKiG 247 (339)
T PRK06036 175 AVEQGKEIKVIACETRPLNQGSRLTTWELM-Q-DNIPVTLIT--D-SMAGIVMRQGMVDKVIVGADRITRD--AVFNKIG 247 (339)
T ss_pred HHHcCCceEEEEcCCCchhhHHHHHHHHHH-H-cCCCEEEEe--h-hHHHHHhccCCCCEEEECccchhhc--Ceehhhh
Confidence 334443 4555 3566666543332332 2 699998875 2 233444423446666662 22 23 644433
Q ss_pred -HHHHHHHHhcCCEEEEe
Q 013079 209 -PELSRLAHDKGVTVVVD 225 (450)
Q Consensus 209 -~~I~~la~~~gi~livD 225 (450)
--|+-+|+.||++|++=
T Consensus 248 T~~lA~~Ak~~~vPfyV~ 265 (339)
T PRK06036 248 TYTHSVLAKEHEIPFYVA 265 (339)
T ss_pred HHHHHHHHHHhCCCEEEE
Confidence 36778889999998873
No 492
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=27.67 E-value=4.9e+02 Score=25.14 Aligned_cols=84 Identities=18% Similarity=0.083 Sum_probs=41.7
Q ss_pred hhcCCCCCCCCCccccCCCChhHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHHHHHh-ccCCCEEEEeCCCchhHHHH
Q 013079 79 MFAGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTASDKAGMSAISSVLMQL-CSSGGHVVAARTLYGGTHAL 157 (450)
Q Consensus 79 ~~~~~~~n~~~~~~y~r~~~~~~~~l~~~iA~l~g~~~~~~tsg~~~gt~ai~~al~~l-~~~gd~Vi~~~~~y~~~~~~ 157 (450)
+++.++.||.++|. .|..... +..... .|...++..++ |..+..++..+- ..-.-+|+++...=......
T Consensus 41 ~~K~E~~nptGS~K-~R~a~~~---l~~a~~--~g~~~vv~~Ss---GN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 111 (324)
T cd01563 41 YVKDEGLNPTGSFK-DRGMTVA---VSKAKE--LGVKAVACAST---GNTSASLAAYAARAGIKCVVFLPAGKALGKLAQ 111 (324)
T ss_pred EEEecCCCCcccHH-HhhHHHH---HHHHHH--cCCCEEEEeCC---CHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHH
Confidence 34556667765542 2222222 222221 24555666677 888777765432 22223455555432222222
Q ss_pred HHHhCCCccCeeEEEeCCC
Q 013079 158 LTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 158 ~~~~~~~~~g~~v~~v~~~ 176 (450)
++ .+|.++..++.+
T Consensus 112 l~-----~~GA~Vi~~~~~ 125 (324)
T cd01563 112 AL-----AYGATVLAVEGN 125 (324)
T ss_pred HH-----HcCCEEEEECCc
Confidence 32 378899888753
No 493
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=27.41 E-value=5.1e+02 Score=24.07 Aligned_cols=93 Identities=14% Similarity=0.151 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeC---C--------CCHHHHHHhhh---cCCce
Q 013079 126 GMSAISSVLMQLCSSGGHVVAARTLYGGTHALLTHFFPRACNITTTFVD---I--------SDHEMVNSAIV---QGRTK 191 (450)
Q Consensus 126 gt~ai~~al~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~---~--------~d~~~l~~ai~---~~~t~ 191 (450)
...|+..++..+ .- .+|-+..|.-......+..++.. .|+++.-.. . .+++.+.+++. .++..
T Consensus 107 ~~~A~~~AL~al-g~-~RIalvTPY~~~v~~~~~~~l~~-~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~aD 183 (239)
T TIGR02990 107 PSSAAVDGLAAL-GV-RRISLLTPYTPETSRPMAQYFAV-RGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDAD 183 (239)
T ss_pred HHHHHHHHHHHc-CC-CEEEEECCCcHHHHHHHHHHHHh-CCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCCC
Confidence 447777777776 22 57777777666666666667665 788875542 1 16777777663 35677
Q ss_pred EEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeC
Q 013079 192 VLYFESISNPTLAVANIPELSRLAHDKGVTVVVDN 226 (450)
Q Consensus 192 lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~ 226 (450)
+|++.--|=+| ++-|.++=++.|.+++.=+
T Consensus 184 AifisCTnLrt-----~~vi~~lE~~lGkPVlsSN 213 (239)
T TIGR02990 184 ALFLSCTALRA-----ATCAQRIEQAIGKPVVTSN 213 (239)
T ss_pred EEEEeCCCchh-----HHHHHHHHHHHCCCEEEHH
Confidence 88875333222 3444455556788886543
No 494
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=27.38 E-value=4.1e+02 Score=24.99 Aligned_cols=80 Identities=16% Similarity=0.158 Sum_probs=38.8
Q ss_pred CEEEEeCCCchhHHHHHHHhCCCccCeeEEE-eCCCC-HHHHHHhhhcCCceEEEEecCCCCcccc----cCHHHHHHHH
Q 013079 142 GHVVAARTLYGGTHALLTHFFPRACNITTTF-VDISD-HEMVNSAIVQGRTKVLYFESISNPTLAV----ANIPELSRLA 215 (450)
Q Consensus 142 d~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~-v~~~d-~~~l~~ai~~~~t~lv~i~~~~NptG~v----~~l~~I~~la 215 (450)
|.+++++..+........ .+.+ .|+...+ +.+.. .+.++... ......||+.+....||.- .++.+..+.+
T Consensus 119 dGviipDLp~ee~~~~~~-~~~~-~gl~~I~lvap~t~~eri~~i~-~~s~gfIY~vs~~GvTG~~~~~~~~~~~~i~~v 195 (258)
T PRK13111 119 DGLIIPDLPPEEAEELRA-AAKK-HGLDLIFLVAPTTTDERLKKIA-SHASGFVYYVSRAGVTGARSADAADLAELVARL 195 (258)
T ss_pred cEEEECCCCHHHHHHHHH-HHHH-cCCcEEEEeCCCCCHHHHHHHH-HhCCCcEEEEeCCCCCCcccCCCccHHHHHHHH
Confidence 567777766554433332 2222 4655554 44433 34444433 3344556654444456653 2355555555
Q ss_pred Hhc-CCEEEE
Q 013079 216 HDK-GVTVVV 224 (450)
Q Consensus 216 ~~~-gi~liv 224 (450)
+++ ++++++
T Consensus 196 k~~~~~pv~v 205 (258)
T PRK13111 196 KAHTDLPVAV 205 (258)
T ss_pred HhcCCCcEEE
Confidence 553 444443
No 495
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=26.93 E-value=3.3e+02 Score=26.52 Aligned_cols=58 Identities=17% Similarity=0.314 Sum_probs=39.9
Q ss_pred cCeeEEEeCCC---CHHHHHHhhhcCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEEeCC
Q 013079 166 CNITTTFVDIS---DHEMVNSAIVQGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 166 ~g~~v~~v~~~---d~~~l~~ai~~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~livD~~ 227 (450)
.|+++...... |.....+.+ ..++.++++..-|. ...-++.+...+.+.+++++.+++
T Consensus 187 ~Gl~vve~~v~~~ndi~~a~~~l-~g~~d~i~~p~dn~---i~s~~~~l~~~a~~~kiPli~sd~ 247 (322)
T COG2984 187 AGLEVVEAAVTSVNDIPRAVQAL-LGKVDVIYIPTDNL---IVSAIESLLQVANKAKIPLIASDT 247 (322)
T ss_pred CCCEEEEEecCcccccHHHHHHh-cCCCcEEEEecchH---HHHHHHHHHHHHHHhCCCeecCCH
Confidence 78888777665 444444445 57888888754332 223577888888999999998875
No 496
>PRK11302 DNA-binding transcriptional regulator HexR; Provisional
Probab=26.90 E-value=4.6e+02 Score=24.58 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=22.8
Q ss_pred cCCceEEEEecCCCCcccccCHHHHHHHHHhcCCEEEE
Q 013079 187 QGRTKVLYFESISNPTLAVANIPELSRLAHDKGVTVVV 224 (450)
Q Consensus 187 ~~~t~lv~i~~~~NptG~v~~l~~I~~la~~~gi~liv 224 (450)
+++.-+|++.. .|...++-++++.|+++|+.+|.
T Consensus 174 ~~~D~vI~iS~----sG~t~~~~~~~~~ak~~g~~vI~ 207 (284)
T PRK11302 174 SDGDVVVLISH----TGRTKSLVELAQLARENGATVIA 207 (284)
T ss_pred CCCCEEEEEeC----CCCCHHHHHHHHHHHHcCCeEEE
Confidence 34444444432 46667788899999999877664
No 497
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=26.82 E-value=3.6e+02 Score=26.24 Aligned_cols=36 Identities=25% Similarity=0.384 Sum_probs=25.4
Q ss_pred eEEEEecCCCCccccc-CHHHHHHHHHhcCCEEEEeCC
Q 013079 191 KVLYFESISNPTLAVA-NIPELSRLAHDKGVTVVVDNT 227 (450)
Q Consensus 191 ~lv~i~~~~NptG~v~-~l~~I~~la~~~gi~livD~~ 227 (450)
.+|++ +-+=|-|.-. ...+|.++|++.|+.+++|..
T Consensus 131 d~Vvl-sGSlP~g~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 131 DIVVL-SGSLPPGVPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CEEEE-eCCCCCCCCHHHHHHHHHHHHhcCCeEEEECC
Confidence 34444 2333445443 378999999999999999976
No 498
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=26.81 E-value=2.8e+02 Score=22.44 Aligned_cols=60 Identities=20% Similarity=0.204 Sum_probs=38.4
Q ss_pred cCeeEEEeCCCCHHHHHHhhhc-CCceEEEEecCCCCcccccCHHHHHHHHHhcC--CEEEEeCCC
Q 013079 166 CNITTTFVDISDHEMVNSAIVQ-GRTKVLYFESISNPTLAVANIPELSRLAHDKG--VTVVVDNTF 228 (450)
Q Consensus 166 ~g~~v~~v~~~d~~~l~~ai~~-~~t~lv~i~~~~NptG~v~~l~~I~~la~~~g--i~livD~~~ 228 (450)
.|..+...+....+...+.+.. .+..+|.+... +.......++++..|+.+ +++++=..+
T Consensus 15 ~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~~---~~~~~~~~~~~~~ik~~~p~~~iv~GG~~ 77 (127)
T cd02068 15 AGFIVAEHDVLSADDIVEDIKELLKPDVVGISLM---TSAIYEALELAKIAKEVLPNVIVVVGGPH 77 (127)
T ss_pred CCCeeeecCCCCHHHHHHHHHHhcCCCEEEEeec---cccHHHHHHHHHHHHHHCCCCEEEECCcc
Confidence 5777777776666665555523 57777777532 223345778888888864 788775554
No 499
>PRK05772 translation initiation factor IF-2B subunit alpha; Provisional
Probab=26.51 E-value=5.4e+02 Score=25.63 Aligned_cols=86 Identities=14% Similarity=0.111 Sum_probs=44.5
Q ss_pred HHhccCCC--EEEE--eCCCchhHHHHHHHhCCCccCeeEEEeCCCCHHHHHHhhhcCCceEEEEec-CCCCcccc-cC-
Q 013079 135 MQLCSSGG--HVVA--ARTLYGGTHALLTHFFPRACNITTTFVDISDHEMVNSAIVQGRTKVLYFES-ISNPTLAV-AN- 207 (450)
Q Consensus 135 ~~l~~~gd--~Vi~--~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~d~~~l~~ai~~~~t~lv~i~~-~~NptG~v-~~- 207 (450)
......|. +|++ ++|...+.......+. + .|++++.+... .+...+.+.++..|++-. --...|.+ ..
T Consensus 193 ~~a~~~gk~f~V~v~EsRP~~qG~rlta~eL~-~-~GIpvtlI~Ds---a~~~~m~~~~Vd~VivGAD~I~~NG~v~NKi 267 (363)
T PRK05772 193 KLAKALGMSVSVIAPETRPWLQGSRLTVYELM-E-EGIKVTLITDT---AVGLVMYKDMVNNVMVGADRILRDGHVFNKI 267 (363)
T ss_pred HHHHHCCCeEEEEECCCCccchhHHHHHHHHH-H-CCCCEEEEehh---HHHHHHhhcCCCEEEECccEEecCCCEeehh
Confidence 33334454 4555 3466666544332332 3 69999987522 222233223456666521 11122333 22
Q ss_pred -HHHHHHHHHhcCCEEEEe
Q 013079 208 -IPELSRLAHDKGVTVVVD 225 (450)
Q Consensus 208 -l~~I~~la~~~gi~livD 225 (450)
---|+-+|+.||++|+|=
T Consensus 268 GTy~lA~~Ak~~~vPfyV~ 286 (363)
T PRK05772 268 GTFKEAVIAHELGIPFYAL 286 (363)
T ss_pred hhHHHHHHHHHhCCCEEEE
Confidence 236778889999998874
No 500
>PLN03013 cysteine synthase
Probab=26.39 E-value=1.9e+02 Score=29.48 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=31.0
Q ss_pred EEEecChHHHHHHHHHHHHHhcc-CCCEEEEeCCCchhHHHHHHHhCCCccCeeEEEeCCC
Q 013079 117 AYCTASDKAGMSAISSVLMQLCS-SGGHVVAARTLYGGTHALLTHFFPRACNITTTFVDIS 176 (450)
Q Consensus 117 ~~~tsg~~~gt~ai~~al~~l~~-~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~v~~v~~~ 176 (450)
++-.++ |..++.++..+-.. -.-.|+++...-..-...++ .+|.+++.++..
T Consensus 178 VVeaSS---GN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ir-----a~GAeVi~v~~~ 230 (429)
T PLN03013 178 LVEPTS---GNTGIGLAFIAASRGYRLILTMPASMSMERRVLLK-----AFGAELVLTDPA 230 (429)
T ss_pred EEEECC---cHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHH-----HcCCEEEEECCC
Confidence 566677 88888877765321 12245555544444444443 378899888754
Done!