Query 013080
Match_columns 450
No_of_seqs 365 out of 2065
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 00:12:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013080.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013080hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.2E-75 2.5E-80 552.2 18.5 258 143-446 15-272 (303)
2 cd07418 MPP_PP7 PP7, metalloph 100.0 2.1E-73 4.5E-78 580.4 33.3 333 111-445 1-350 (377)
3 cd07420 MPP_RdgC Drosophila me 100.0 1.7E-70 3.8E-75 550.9 30.2 283 117-447 2-311 (321)
4 cd07417 MPP_PP5_C PP5, C-termi 100.0 3.4E-69 7.4E-74 541.9 27.9 290 105-447 2-291 (316)
5 KOG0376 Serine-threonine phosp 100.0 2.8E-68 6.1E-73 544.7 15.6 368 13-446 72-444 (476)
6 KOG0374 Serine/threonine speci 100.0 1.1E-66 2.3E-71 524.6 23.3 260 142-447 30-291 (331)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 4.8E-66 1E-70 512.9 27.1 270 123-447 3-272 (285)
8 PTZ00480 serine/threonine-prot 100.0 4.5E-66 9.8E-71 518.3 27.0 257 143-446 31-288 (320)
9 PTZ00239 serine/threonine prot 100.0 1.3E-65 2.9E-70 512.9 27.9 271 122-446 3-273 (303)
10 KOG0373 Serine/threonine speci 100.0 3E-66 6.4E-71 481.7 17.6 260 142-446 17-276 (306)
11 PTZ00244 serine/threonine-prot 100.0 4.4E-65 9.6E-70 507.5 26.4 259 141-446 22-281 (294)
12 cd07416 MPP_PP2B PP2B, metallo 100.0 5.8E-65 1.3E-69 509.8 26.8 272 122-446 3-285 (305)
13 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 7.5E-65 1.6E-69 506.1 25.4 259 142-447 21-280 (293)
14 KOG0377 Protein serine/threoni 100.0 7.3E-66 1.6E-70 516.3 15.7 297 98-446 99-419 (631)
15 smart00156 PP2Ac Protein phosp 100.0 6.6E-64 1.4E-68 495.0 25.8 257 144-447 1-258 (271)
16 KOG0375 Serine-threonine phosp 100.0 9.1E-65 2E-69 498.6 15.4 287 107-443 23-327 (517)
17 cd07419 MPP_Bsu1_C Arabidopsis 100.0 2.2E-62 4.8E-67 492.7 27.6 270 137-447 14-300 (311)
18 KOG0371 Serine/threonine prote 100.0 1.6E-60 3.6E-65 452.2 12.5 258 143-446 32-289 (319)
19 cd00144 MPP_PPP_family phospho 100.0 4.2E-32 9.1E-37 259.0 20.5 216 178-443 1-223 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 3.7E-24 7.9E-29 208.9 16.4 126 175-303 1-145 (245)
21 cd07423 MPP_PrpE Bacillus subt 99.9 2.6E-22 5.6E-27 194.5 17.2 123 175-302 1-141 (234)
22 TIGR00668 apaH bis(5'-nucleosy 99.9 5E-23 1.1E-27 203.1 11.2 120 175-303 1-126 (279)
23 cd07425 MPP_Shelphs Shewanella 99.9 1.3E-22 2.7E-27 193.6 13.4 180 178-429 1-196 (208)
24 cd07422 MPP_ApaH Escherichia c 99.9 6.6E-23 1.4E-27 201.3 11.5 119 177-303 1-124 (257)
25 PRK00166 apaH diadenosine tetr 99.9 6.7E-22 1.5E-26 196.0 15.0 121 175-303 1-126 (275)
26 PRK11439 pphA serine/threonine 99.9 1.3E-21 2.8E-26 187.7 14.6 126 168-301 10-146 (218)
27 cd07421 MPP_Rhilphs Rhilph pho 99.9 2.6E-21 5.7E-26 191.5 13.3 74 176-250 3-82 (304)
28 cd07413 MPP_PA3087 Pseudomonas 99.9 3.8E-21 8.2E-26 185.2 12.4 118 178-301 2-143 (222)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.8 8.8E-21 1.9E-25 180.3 13.5 122 175-303 1-132 (207)
30 PHA02239 putative protein phos 99.8 8.1E-21 1.7E-25 184.4 12.9 125 175-302 1-167 (235)
31 PRK09968 serine/threonine-spec 99.8 4.4E-20 9.6E-25 177.3 11.2 130 166-302 6-145 (218)
32 PF08321 PPP5: PPP5 TPR repeat 99.7 8.8E-17 1.9E-21 134.8 8.8 93 56-169 1-95 (95)
33 PF00149 Metallophos: Calcineu 99.2 5.6E-11 1.2E-15 103.3 10.5 76 176-252 2-82 (200)
34 KOG0376 Serine-threonine phosp 99.2 1.2E-12 2.6E-17 135.7 -3.7 288 141-436 12-301 (476)
35 PRK09453 phosphodiesterase; Pr 98.9 4.9E-09 1.1E-13 97.6 8.8 69 175-249 1-77 (182)
36 TIGR00040 yfcE phosphoesterase 98.8 5.2E-08 1.1E-12 88.5 11.6 64 175-248 1-64 (158)
37 cd00841 MPP_YfcE Escherichia c 98.8 2.8E-08 6.2E-13 89.5 8.7 60 176-249 1-60 (155)
38 PF12850 Metallophos_2: Calcin 98.7 5.9E-08 1.3E-12 86.5 8.5 61 175-249 1-61 (156)
39 COG0639 ApaH Diadenosine tetra 98.7 4.1E-08 8.8E-13 85.6 6.3 146 250-434 3-155 (155)
40 cd07397 MPP_DevT Myxococcus xa 98.5 1.1E-06 2.5E-11 85.6 13.3 111 176-301 2-158 (238)
41 cd07379 MPP_239FB Homo sapiens 98.5 1.8E-06 3.9E-11 76.3 12.0 61 176-248 1-63 (135)
42 cd00838 MPP_superfamily metall 98.4 1.6E-06 3.6E-11 73.3 10.1 67 178-246 1-69 (131)
43 cd07392 MPP_PAE1087 Pyrobaculu 98.4 5.3E-06 1.2E-10 76.2 12.4 65 177-249 1-66 (188)
44 cd07388 MPP_Tt1561 Thermus the 98.3 1.4E-06 3E-11 84.4 7.7 71 175-248 5-75 (224)
45 PRK05340 UDP-2,3-diacylglucosa 97.9 3.2E-05 6.9E-10 75.3 8.7 70 175-248 1-83 (241)
46 cd07394 MPP_Vps29 Homo sapiens 97.9 4.1E-05 8.9E-10 71.5 8.3 59 176-248 1-65 (178)
47 PRK11340 phosphodiesterase Yae 97.9 8.8E-05 1.9E-09 73.7 10.5 71 174-248 49-125 (271)
48 cd07404 MPP_MS158 Microscilla 97.9 1.3E-05 2.9E-10 73.0 4.2 68 177-248 1-68 (166)
49 cd07400 MPP_YydB Bacillus subt 97.8 0.00018 3.8E-09 63.8 11.1 68 177-247 1-80 (144)
50 cd07403 MPP_TTHA0053 Thermus t 97.8 0.00013 2.9E-09 64.3 10.1 55 179-246 2-56 (129)
51 cd07385 MPP_YkuE_C Bacillus su 97.8 3.5E-05 7.5E-10 73.2 6.2 71 175-249 2-77 (223)
52 cd07399 MPP_YvnB Bacillus subt 97.8 0.0013 2.8E-08 63.0 16.7 69 176-247 2-81 (214)
53 cd07391 MPP_PF1019 Pyrococcus 97.5 0.00027 5.8E-09 65.2 7.8 45 205-249 43-89 (172)
54 COG0622 Predicted phosphoester 97.5 0.00079 1.7E-08 62.7 10.8 65 175-249 2-66 (172)
55 cd07390 MPP_AQ1575 Aquifex aeo 97.5 0.00029 6.4E-09 64.8 7.4 68 177-249 1-83 (168)
56 TIGR01854 lipid_A_lpxH UDP-2,3 97.5 0.00041 8.9E-09 67.1 8.6 68 177-248 1-81 (231)
57 TIGR03729 acc_ester putative p 97.5 0.00023 5E-09 69.0 6.8 68 176-248 1-74 (239)
58 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.4 0.00039 8.5E-09 69.0 7.9 72 177-248 1-86 (262)
59 PHA02546 47 endonuclease subun 97.4 0.00034 7.3E-09 71.8 6.5 73 175-249 1-90 (340)
60 cd00840 MPP_Mre11_N Mre11 nucl 97.3 0.0004 8.6E-09 65.6 6.4 73 176-250 1-91 (223)
61 cd07396 MPP_Nbla03831 Homo sap 97.3 0.00066 1.4E-08 67.1 7.6 72 176-249 2-87 (267)
62 cd07395 MPP_CSTP1 Homo sapiens 97.1 0.035 7.6E-07 54.3 17.7 74 175-248 5-99 (262)
63 PRK11148 cyclic 3',5'-adenosin 97.1 0.0016 3.4E-08 64.6 8.0 71 175-247 15-97 (275)
64 TIGR00619 sbcd exonuclease Sbc 97.1 0.0012 2.6E-08 65.1 6.9 73 175-249 1-89 (253)
65 cd07402 MPP_GpdQ Enterobacter 97.1 0.002 4.3E-08 61.8 8.4 71 176-248 1-83 (240)
66 cd07398 MPP_YbbF-LpxH Escheric 97.1 0.0015 3.3E-08 61.7 7.1 23 373-395 177-199 (217)
67 PRK04036 DNA polymerase II sma 97.1 0.0021 4.6E-08 69.5 9.0 75 173-249 242-344 (504)
68 cd08163 MPP_Cdc1 Saccharomyces 97.1 0.047 1E-06 54.0 17.9 23 372-394 203-225 (257)
69 PRK10966 exonuclease subunit S 96.9 0.0019 4.1E-08 68.0 7.3 72 175-249 1-88 (407)
70 TIGR00024 SbcD_rel_arch putati 96.7 0.0042 9E-08 60.3 7.3 70 175-249 15-103 (225)
71 cd07383 MPP_Dcr2 Saccharomyces 96.7 0.0036 7.8E-08 58.9 6.7 71 175-246 3-87 (199)
72 cd07393 MPP_DR1119 Deinococcus 96.7 0.0045 9.7E-08 60.0 7.5 69 177-247 1-83 (232)
73 COG2129 Predicted phosphoester 96.7 0.061 1.3E-06 52.0 14.9 178 174-394 3-184 (226)
74 TIGR00583 mre11 DNA repair pro 96.7 0.0045 9.8E-08 65.1 7.8 56 173-230 2-69 (405)
75 cd08165 MPP_MPPE1 human MPPE1 96.6 0.0034 7.4E-08 57.3 5.6 45 205-249 40-90 (156)
76 cd07380 MPP_CWF19_N Schizosacc 96.4 0.0077 1.7E-07 54.9 6.3 68 178-246 1-68 (150)
77 COG1409 Icc Predicted phosphoh 96.2 0.018 3.9E-07 56.2 8.0 72 176-251 2-81 (301)
78 cd00839 MPP_PAPs purple acid p 96.0 0.0095 2.1E-07 59.1 5.4 70 175-250 5-83 (294)
79 cd07401 MPP_TMEM62_N Homo sapi 96.0 0.015 3.3E-07 57.2 6.7 70 177-248 2-89 (256)
80 cd00845 MPP_UshA_N_like Escher 95.9 0.015 3.3E-07 56.4 5.9 67 176-248 2-82 (252)
81 COG0420 SbcD DNA repair exonuc 95.8 0.019 4.1E-07 59.8 6.9 74 175-250 1-90 (390)
82 COG4186 Predicted phosphoester 95.8 0.048 1E-06 49.9 8.3 71 176-250 5-88 (186)
83 cd07386 MPP_DNA_pol_II_small_a 95.7 0.041 8.9E-07 53.5 8.1 70 178-249 2-95 (243)
84 cd07384 MPP_Cdc1_like Saccharo 95.6 0.021 4.6E-07 52.9 5.6 45 205-249 47-101 (171)
85 COG1407 Predicted ICC-like pho 95.6 0.029 6.3E-07 54.7 6.4 73 175-251 20-113 (235)
86 cd08166 MPP_Cdc1_like_1 unchar 95.4 0.026 5.7E-07 53.6 5.3 44 205-248 44-93 (195)
87 COG2908 Uncharacterized protei 95.0 0.088 1.9E-06 51.4 7.8 101 179-303 2-118 (237)
88 cd08164 MPP_Ted1 Saccharomyces 94.6 0.068 1.5E-06 50.8 5.7 67 182-249 24-112 (193)
89 KOG3662 Cell division control 94.4 0.13 2.8E-06 54.0 7.9 74 174-248 48-144 (410)
90 PF14582 Metallophos_3: Metall 94.2 0.064 1.4E-06 52.1 4.5 73 175-249 6-103 (255)
91 COG1408 Predicted phosphohydro 93.9 0.14 3.1E-06 51.4 6.8 72 174-249 44-119 (284)
92 cd07410 MPP_CpdB_N Escherichia 93.7 0.099 2.1E-06 51.8 5.2 66 176-247 2-94 (277)
93 KOG0918 Selenium-binding prote 93.6 0.0023 4.9E-08 66.0 -6.7 96 203-304 47-142 (476)
94 cd07412 MPP_YhcR_N Bacillus su 93.5 0.095 2.1E-06 52.5 4.7 67 176-248 2-88 (288)
95 PLN02533 probable purple acid 92.9 0.15 3.2E-06 54.2 5.2 70 175-249 140-212 (427)
96 cd07378 MPP_ACP5 Homo sapiens 91.3 0.4 8.7E-06 47.1 5.9 71 176-248 2-83 (277)
97 cd07411 MPP_SoxB_N Thermus the 91.2 0.42 9.1E-06 47.1 5.9 66 176-248 2-95 (264)
98 cd07408 MPP_SA0022_N Staphyloc 90.7 0.34 7.4E-06 47.5 4.8 65 176-247 2-81 (257)
99 KOG3325 Membrane coat complex 90.6 3.1 6.8E-05 38.0 10.2 62 177-248 3-66 (183)
100 PF06874 FBPase_2: Firmicute f 89.7 0.46 1E-05 52.2 5.1 42 205-251 186-227 (640)
101 TIGR00282 metallophosphoestera 89.1 0.81 1.7E-05 45.7 5.9 69 175-249 1-72 (266)
102 cd07409 MPP_CD73_N CD73 ecto-5 88.5 0.99 2.1E-05 45.0 6.1 67 176-248 2-94 (281)
103 COG1768 Predicted phosphohydro 87.6 1.1 2.4E-05 42.2 5.3 47 199-249 39-87 (230)
104 KOG2476 Uncharacterized conser 86.6 1.6 3.6E-05 46.3 6.5 71 174-245 5-75 (528)
105 COG1311 HYS2 Archaeal DNA poly 85.6 3.6 7.7E-05 44.1 8.5 77 175-251 226-324 (481)
106 KOG2863 RNA lariat debranching 84.5 2.6 5.7E-05 43.6 6.7 74 175-249 1-89 (456)
107 cd00842 MPP_ASMase acid sphing 83.7 2.7 5.9E-05 41.8 6.5 64 188-251 53-125 (296)
108 PRK09419 bifunctional 2',3'-cy 83.5 1.6 3.5E-05 52.1 5.5 67 175-247 661-735 (1163)
109 cd07407 MPP_YHR202W_N Saccharo 82.4 1.8 3.8E-05 43.5 4.5 68 176-248 7-97 (282)
110 cd07406 MPP_CG11883_N Drosophi 80.3 3.4 7.5E-05 40.5 5.7 57 185-247 21-82 (257)
111 cd07382 MPP_DR1281 Deinococcus 80.1 4.1 8.8E-05 40.4 6.1 68 176-249 1-71 (255)
112 cd07405 MPP_UshA_N Escherichia 77.9 2.9 6.2E-05 41.9 4.4 67 176-248 2-87 (285)
113 COG3855 Fbp Uncharacterized pr 76.8 1.7 3.8E-05 46.2 2.5 42 205-251 192-233 (648)
114 PRK09420 cpdB bifunctional 2', 72.2 5.8 0.00013 44.5 5.3 66 176-247 27-121 (649)
115 PF04042 DNA_pol_E_B: DNA poly 71.8 8.9 0.00019 36.0 5.8 72 177-250 1-93 (209)
116 cd08162 MPP_PhoA_N Synechococc 71.3 6.8 0.00015 39.9 5.2 65 177-247 3-90 (313)
117 TIGR01390 CycNucDiestase 2',3' 68.4 7.3 0.00016 43.5 5.1 66 176-247 4-98 (626)
118 COG0737 UshA 5'-nucleotidase/2 65.8 8 0.00017 42.0 4.7 68 176-249 28-116 (517)
119 PRK09419 bifunctional 2',3'-cy 65.6 8.2 0.00018 46.3 5.0 66 176-247 43-138 (1163)
120 KOG1432 Predicted DNA repair e 65.2 12 0.00025 38.8 5.3 44 205-249 102-148 (379)
121 PRK11907 bifunctional 2',3'-cy 62.7 12 0.00025 43.3 5.3 66 176-247 117-212 (814)
122 TIGR01530 nadN NAD pyrophospha 62.1 12 0.00027 41.0 5.3 53 190-248 37-94 (550)
123 PTZ00235 DNA polymerase epsilo 56.2 35 0.00076 34.6 6.9 74 174-248 27-122 (291)
124 KOG3947 Phosphoesterases [Gene 53.7 22 0.00048 35.7 4.9 67 173-249 60-127 (305)
125 PRK09558 ushA bifunctional UDP 52.4 22 0.00047 39.0 5.2 67 176-248 36-121 (551)
126 PTZ00422 glideosome-associated 49.2 31 0.00067 36.4 5.5 73 175-248 27-109 (394)
127 KOG3339 Predicted glycosyltran 49.0 57 0.0012 31.1 6.5 87 205-300 40-143 (211)
128 PRK09418 bifunctional 2',3'-cy 48.4 28 0.0006 40.1 5.3 66 176-247 41-141 (780)
129 cd07387 MPP_PolD2_C PolD2 (DNA 46.4 73 0.0016 31.7 7.3 75 177-251 2-110 (257)
130 KOG1378 Purple acid phosphatas 46.2 30 0.00064 37.1 4.8 20 375-394 322-341 (452)
131 KOG2310 DNA repair exonuclease 38.8 80 0.0017 34.8 6.6 54 175-230 14-79 (646)
132 KOG2679 Purple (tartrate-resis 37.4 33 0.00071 34.7 3.2 71 175-249 44-127 (336)
133 PF02875 Mur_ligase_C: Mur lig 35.8 1E+02 0.0022 24.8 5.5 70 176-245 13-82 (91)
134 PF00515 TPR_1: Tetratricopept 32.4 27 0.00058 22.5 1.2 22 13-34 1-22 (34)
135 PF13258 DUF4049: Domain of un 28.0 2E+02 0.0043 28.6 6.7 122 147-303 58-187 (318)
136 PF07719 TPR_2: Tetratricopept 24.2 46 0.00099 21.0 1.2 22 13-34 1-22 (34)
137 PF06874 FBPase_2: Firmicute f 22.0 78 0.0017 35.4 3.1 56 373-441 507-569 (640)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-75 Score=552.22 Aligned_cols=258 Identities=35% Similarity=0.614 Sum_probs=245.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHH
Q 013080 143 VMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE 222 (450)
Q Consensus 143 ~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slE 222 (450)
.+++.++..||.+++++|.+|+|++.++ .|++|||||||||+||+.+|+ +.|.+++++ |+|||||||||.+|+|
T Consensus 15 li~E~eV~~LC~~~~eiL~~E~NV~~i~----tPvtvcGDIHGQf~Dllelf~-igG~~~~t~-YLFLGDyVDRG~~SvE 88 (303)
T KOG0372|consen 15 LIAESEVKALCAKVREILVEESNVQRID----TPVTVCGDIHGQFYDLLELFR-IGGDVPETN-YLFLGDYVDRGYYSVE 88 (303)
T ss_pred CCcHHHHHHHHHHHHHHHhcCCCceecC----CCcEEeecccchHHHHHHHHH-hCCCCCCCc-eEeecchhccccchHH
Confidence 6889999999999999999999999998 789999999999999999999 888888877 9999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCCC
Q 013080 223 VLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFR 302 (450)
Q Consensus 223 vl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~~ 302 (450)
++++|++||++||++|++||||||++.+++.|||++||.+|||.. .+|+.+.+.|+.||++|+|++++||||||++|
T Consensus 89 t~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~---~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP 165 (303)
T KOG0372|consen 89 TFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSA---NVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSP 165 (303)
T ss_pred HHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCCh---HHHHHHHHHHHhhhHhheecCcEEEEcCCCCc
Confidence 999999999999999999999999999999999999999999975 79999999999999999999999999999976
Q ss_pred CcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCCCCcccccCCCeeeeChhhHHHHHH
Q 013080 303 RTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLK 382 (450)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~~g~~~n~RG~g~~fG~d~~~~FL~ 382 (450)
+ +.++++|+.++|..+.| ..+.++|+|||||.+.+||..|+||+|++||.++++.|++
T Consensus 166 ~---------------------i~~lDqIr~lDR~~Eip-h~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~ 223 (303)
T KOG0372|consen 166 S---------------------IQTLDQIRVLDRKQEVP-HDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLE 223 (303)
T ss_pred c---------------------hhhHHHHHHhhccccCC-CCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHH
Confidence 4 58999999999998665 5678999999999999999999999999999999999999
Q ss_pred hcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcceeEEEee
Q 013080 383 ENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 446 (450)
Q Consensus 383 ~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~ 446 (450)
.||+.+|+|+|| .+++||++.+ +++++|||||||||..-.|-+|||++.
T Consensus 224 ~N~~~~I~RaHQ------------Lv~eGyk~~F---~~~v~TVWSAPNYCYrCGN~AsIl~ld 272 (303)
T KOG0372|consen 224 ANGLSLICRAHQ------------LVMEGYKWHF---DEKVVTVWSAPNYCYRCGNVAAILELD 272 (303)
T ss_pred hCChHHHHHHHH------------HHHhhHHHhc---CCceEEEecCCchhhhcCChHHheeec
Confidence 999999999999 5899999977 489999999999999999999999875
No 2
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.1e-73 Score=580.41 Aligned_cols=333 Identities=52% Similarity=0.964 Sum_probs=295.7
Q ss_pred CCCCCCCCHHHHHHHHHHhhhcCCC-CccccccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHH
Q 013080 111 WPRNGRISLEWIQLLISTFKWSSWK-DPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHD 189 (450)
Q Consensus 111 ~p~~~~~t~~~i~~l~~~~~~~~~~-~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~d 189 (450)
||..+.+|.||++.||+.|++..++ .|.++...++.+++.+||.+|+++|++||++++|+++...+++||||||||+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~d 80 (377)
T cd07418 1 WPDGGALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHD 80 (377)
T ss_pred CCCCCccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHH
Confidence 7889999999999999999998766 788888899999999999999999999999999987666799999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcch
Q 013080 190 LVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDC 269 (450)
Q Consensus 190 L~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~ 269 (450)
|.++|+ ..|+++.++.|||||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..|+..+|+.. +
T Consensus 81 L~~ll~-~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~-~ 158 (377)
T cd07418 81 VLFLLE-DAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDK-G 158 (377)
T ss_pred HHHHHH-HhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCch-H
Confidence 999999 99998877779999999999999999999999999999999999999999999999999999999999865 5
Q ss_pred hHHHHHHHHHhhcCCcceeeeceEEEEecCCCCCcCCCccccccccccc------ccccCCCCChHHHhhhccccccCCC
Q 013080 270 KLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQ------KLDTLSLGSLREFAKVNRFLEDVPE 343 (450)
Q Consensus 270 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~------~~~~~~~~sl~~i~~i~R~~~~p~~ 343 (450)
..+|+.++++|++||+++++++++|||||||++.+.+.......+.+.. ....+.+.++++|.++.|+..+|+.
T Consensus 159 ~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~ 238 (377)
T cd07418 159 KHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPG 238 (377)
T ss_pred HHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCC
Confidence 6799999999999999999999999999999876543222111111111 1224578899999999998666654
Q ss_pred Cc---ccccccccCCCCCCCccccc-CCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCceecccCC
Q 013080 344 ND---LLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTV 419 (450)
Q Consensus 344 ~~---l~~dlLWsDP~~~~g~~~n~-RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~ 419 (450)
.+ +++|+|||||....+|.+|. ||.|+.||++++++||++|++++||||||+++++.+|.++.++++||++.|+..
T Consensus 239 ~~~~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~ 318 (377)
T cd07418 239 EGSNLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVE 318 (377)
T ss_pred CCccccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCC
Confidence 43 57899999999888998885 999999999999999999999999999999999999999999999999988555
Q ss_pred CCeEEEEecCCCccc------ccCcceeEEEe
Q 013080 420 SGELYTLFTAPNYPQ------VQILLGCTMHS 445 (450)
Q Consensus 420 ~gk~iTVFSA~nY~~------~~~~~g~~l~~ 445 (450)
+|+|+|||||||||+ ...|.||++.+
T Consensus 319 ~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~ 350 (377)
T cd07418 319 SGKLITLFSAPDYPQFQATEERYNNKGAYIIL 350 (377)
T ss_pred CCcEEEEecCCccccccccccccCcceEEEEE
Confidence 699999999999994 56899998776
No 3
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.7e-70 Score=550.86 Aligned_cols=283 Identities=32% Similarity=0.556 Sum_probs=254.5
Q ss_pred CCHHHHHHHHHHhhhcCCCCccccccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHH
Q 013080 117 ISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEE 196 (450)
Q Consensus 117 ~t~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~ 196 (450)
+|.+.++.+++.+.... .|+.+++.+||.+|+++|++||++++|+.+..++++||||||||+.+|+++|+
T Consensus 2 ~~~~~~~~~i~~~~~~~---------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~- 71 (321)
T cd07420 2 LTKDHIDALIEAFKEKQ---------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFY- 71 (321)
T ss_pred CCHHHHHHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHH-
Confidence 89999999999988643 58899999999999999999999999987666799999999999999999999
Q ss_pred hcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHH
Q 013080 197 NAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKC 276 (450)
Q Consensus 197 ~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~ 276 (450)
..|+|+.+++|||||||||||++|+||+.+|++||+.+|++|++||||||.+.++..|||.+||..+|+.. ...+|..+
T Consensus 72 ~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~-~~~l~~~~ 150 (321)
T cd07420 72 KNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLH-GKKILRLL 150 (321)
T ss_pred HcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCcc-HHHHHHHH
Confidence 99998777779999999999999999999999999999999999999999999999999999999999864 56799999
Q ss_pred HHHhhcCCcceeeeceEEEEecCCCCCcCCCcccccccccccccccCCCCChHHHhhhccccc----cCC----------
Q 013080 277 LECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLE----DVP---------- 342 (450)
Q Consensus 277 ~~~f~~LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~----~p~---------- 342 (450)
.++|++||+||+|++++|||||||++. .++++|.++.|+.. .|+
T Consensus 151 ~~~F~~LPlaaii~~~i~cvHGGi~~~----------------------~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~ 208 (321)
T cd07420 151 EDVFSWLPLATIIDNKILVVHGGISDS----------------------TDLDLLDKIDRHKYVSVLRPPLRKGMEELTG 208 (321)
T ss_pred HHHHHhCCceEEEcCCEEEEeCCCCCc----------------------cCHHHHHhhhccccccccCCCcccccccccc
Confidence 999999999999999999999999742 57888888877421 111
Q ss_pred ------------CCcccccccccCCCCCCCcc-cccCCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCCCCcccccc
Q 013080 343 ------------ENDLLSDVLWSDPSSEAGLR-ENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNML 409 (450)
Q Consensus 343 ------------~~~l~~dlLWsDP~~~~g~~-~n~RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~ 409 (450)
+..++.|+|||||....++. .+.||.|+.||++++++||++||+++||||||+ ++
T Consensus 209 ~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~------------v~ 276 (321)
T cd07420 209 EEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHEC------------KP 276 (321)
T ss_pred ccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh------------hh
Confidence 12467899999999876644 456999999999999999999999999999995 68
Q ss_pred CCceecccCCCCeEEEEecCCCcccccCcceeEEEeee
Q 013080 410 NGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSRR 447 (450)
Q Consensus 410 ~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~~ 447 (450)
+||++.| +|+|+|||||||||+...|.||+|.+..
T Consensus 277 ~G~~~~~---~~~~iTvFSa~nY~~~~~N~gavl~i~~ 311 (321)
T cd07420 277 EGYEFCH---NNKVITIFSASNYYEEGSNRGAYIKLGP 311 (321)
T ss_pred cceEEec---CCeEEEEecCCccCCCCCccEEEEEECC
Confidence 9999988 4999999999999999999999999864
No 4
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=3.4e-69 Score=541.89 Aligned_cols=290 Identities=36% Similarity=0.636 Sum_probs=268.0
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCccccccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCc
Q 013080 105 DTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDIL 184 (450)
Q Consensus 105 ~~~~~~~p~~~~~t~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIH 184 (450)
+||++++| ++|.++++.+++.++... .|+.+++.+||.+|+++|++||++++++.|...+++||||||
T Consensus 2 ~~~~~~~~---~i~~~~~~~~~~~~~~~~---------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIH 69 (316)
T cd07417 2 DGPRLEDE---KVTLEFVKEMIEWFKDQK---------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTH 69 (316)
T ss_pred CCcccCCC---CCCHHHHHHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeeccc
Confidence 56888666 899999999999998754 588999999999999999999999999876667899999999
Q ss_pred CcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHh
Q 013080 185 GQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKF 264 (450)
Q Consensus 185 G~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky 264 (450)
||+.+|.++|+ ..|+++.++.|||||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..|+..+|
T Consensus 70 G~~~dL~~ll~-~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~ 148 (316)
T cd07417 70 GQFYDLLNIFE-LNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKY 148 (316)
T ss_pred CCHHHHHHHHH-hcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcc
Confidence 99999999999 99998877779999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCCCCcCCCcccccccccccccccCCCCChHHHhhhccccccCCCC
Q 013080 265 GKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPEN 344 (450)
Q Consensus 265 ~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~ 344 (450)
+. .+|..+.++|++||++++++++++||||||++. ...+++++.++.|+. +++.+
T Consensus 149 ~~----~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~--------------------~~~~l~~i~~i~r~~-~~~~~ 203 (316)
T cd07417 149 NE----QMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSD--------------------DGVTLDDIRKIDRFR-QPPDS 203 (316)
T ss_pred cH----HHHHHHHHHHHhchHhheeCCeEEEEccccccC--------------------CCccHHHhhcccCCC-CCCcc
Confidence 75 499999999999999999999999999999542 347899999999986 45577
Q ss_pred cccccccccCCCCCCCcccccCCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEE
Q 013080 345 DLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELY 424 (450)
Q Consensus 345 ~l~~dlLWsDP~~~~g~~~n~RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~i 424 (450)
+++.|+|||||....+|.+|.||.|+.||++++++||++||+++||||||+ +++||++.| +|+|+
T Consensus 204 ~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~~ 268 (316)
T cd07417 204 GLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEV------------KDEGYEVEH---DGKCI 268 (316)
T ss_pred ccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcc------------cceeEEEec---CCeEE
Confidence 889999999999889999999999999999999999999999999999995 689999988 59999
Q ss_pred EEecCCCcccccCcceeEEEeee
Q 013080 425 TLFTAPNYPQVQILLGCTMHSRR 447 (450)
Q Consensus 425 TVFSA~nY~~~~~~~g~~l~~~~ 447 (450)
|||||||||+...|.||+|.+..
T Consensus 269 TvfSa~~Y~~~~~N~ga~~~i~~ 291 (316)
T cd07417 269 TVFSAPNYCDQMGNKGAFIRITG 291 (316)
T ss_pred EEeCCccccCCCCcceEEEEEeC
Confidence 99999999999999999999874
No 5
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.8e-68 Score=544.75 Aligned_cols=368 Identities=33% Similarity=0.599 Sum_probs=332.1
Q ss_pred cchhHHHhhhHHHHHHHHHHhhhhhhccccccCchh-HHHHHHHHHHHhhhhhhhhhchhhhhhhhhhhhhhcccchhhh
Q 013080 13 KNSFYRMICNFLQVAVAKQVIDYACEMNFQDLDGPL-KQAVVEILRSACNIVSKQRVFDSSLQGLLEELQVEVGSTMRER 91 (450)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~c~~~~~~~~fe~ai~~~~~~~~~~~~~~~~~~ 91 (450)
.|+|||++.++|.++..+.|+. .||.+.+.. +++-+..+..||++++++.+||+||.....+ + .+..+.
T Consensus 72 ~K~Y~rrg~a~m~l~~~~~A~~-----~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d-~----~s~~~~ 141 (476)
T KOG0376|consen 72 IKAYVRRGTAVMALGEFKKALL-----DLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGD-K----KSVVEM 141 (476)
T ss_pred hheeeeccHHHHhHHHHHHHHH-----HHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccC-C----cccccc
Confidence 5899999999999999999988 777766554 6666777888999999999999999995432 2 222222
Q ss_pred -ccCCCccCcc-cCC--CCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCccccccCCCHHHHHHHHHHHHHHHHhCCCee
Q 013080 92 -LVGGKLENLT-KEQ--DTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCV 167 (450)
Q Consensus 92 -~~g~~~~~i~-~~~--~~~~~~~p~~~~~t~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv 167 (450)
+ ++.+++ +++ +|+.+ +..++|.+|++.+|+.++.++ .|+...+.+|+..+..+++++|+++
T Consensus 142 ~~---~~~~~~~i~~~y~g~~l---e~~kvt~e~vk~~~~~~~~~~---------~L~~k~a~~i~~~~~~~~~~l~~~v 206 (476)
T KOG0376|consen 142 KI---DEEDMDLIESDYSGPVL---EDHKVTLEFVKTLMEVFKNQK---------KLPKKYAYSILDLAKTILRKLPSLV 206 (476)
T ss_pred cc---ccccccccccccCCccc---ccchhhHHHHHHHHHhhhccc---------ccccccceeeHHHHhhHHhcCCcce
Confidence 3 555555 444 67767 555899999999999988876 4677889999999999999999999
Q ss_pred eeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccc
Q 013080 168 KLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHET 247 (450)
Q Consensus 168 ~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~ 247 (450)
+++++.+..+.|+||+|||+++++++|. +.|.|+.+.+|+|+||+||||.+|+|++..+++.|+.+|+++|++|||||+
T Consensus 207 e~~~~~d~~~sv~gd~hGqfydl~nif~-l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es 285 (476)
T KOG0376|consen 207 EISVPGDVKISVCGDTHGQFYDLLNIFE-LNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHES 285 (476)
T ss_pred EeecCCCceEEecCCccccccchhhhHh-hcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccc
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCCCCcCCCcccccccccccccccCCCCC
Q 013080 248 KNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGS 327 (450)
Q Consensus 248 ~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~s 327 (450)
..|++.|||.+++..+|... .+..+.+.|.+||++.+|+++++++|||+++.. -.+
T Consensus 286 ~~m~~iy~f~~e~~~kyte~----~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~--------------------~v~ 341 (476)
T KOG0376|consen 286 DNMNKIYGFEGEVKAKYTEE----MFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPD--------------------GVT 341 (476)
T ss_pred hHHHHHhCCCcchhhhhHHH----HHHhhhhhhccccchhhhcCceEEEecCcCCCC--------------------Ccc
Confidence 99999999999999999876 888888999999999999999999999998753 367
Q ss_pred hHHHhhhccccccCCCCcccccccccCCCCCCCcccccCCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCCCCcccc
Q 013080 328 LREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARN 407 (450)
Q Consensus 328 l~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~~g~~~n~RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~ 407 (450)
++||++|.|+ ..|++.+.++++|||||+..+|+.+|+||.|..||+|++++||+.|++++||||||++
T Consensus 342 l~d~r~i~r~-~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~----------- 409 (476)
T KOG0376|consen 342 LEDFRNIDRF-EQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVK----------- 409 (476)
T ss_pred HHHHHhhhhc-cCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhhccccC-----------
Confidence 9999999999 4788999999999999999999999999999999999999999999999999999974
Q ss_pred ccCCceecccCCCCeEEEEecCCCcccccCcceeEEEee
Q 013080 408 MLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 446 (450)
Q Consensus 408 v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~ 446 (450)
+.||++.| +|+|+|||||||||+..+|.|+.+++.
T Consensus 410 -d~gy~~eh---~g~l~tvfsapnycd~~~n~ga~i~~~ 444 (476)
T KOG0376|consen 410 -DEGYEVEH---SGKLITVFSAPNYCDQMGNKGAFIHLE 444 (476)
T ss_pred -CCceeeec---CCcEEEEecCcchhhhcCCcceEEEec
Confidence 68999999 599999999999999999999999985
No 6
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.1e-66 Score=524.56 Aligned_cols=260 Identities=37% Similarity=0.642 Sum_probs=244.4
Q ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcC-CCCCCceEEEeccccccCCch
Q 013080 142 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAG-FPSDHRYFVFNGNYVDKGSWG 220 (450)
Q Consensus 142 ~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g-~~~~~~~~vFLGDyVDRG~~s 220 (450)
..++.+++.+||..+.++|..+|++++++ .||+|||||||||.||+++|. ..| +|++.+ |||||||||||++|
T Consensus 30 ~~l~~~ei~~l~~~~~~if~~~~~l~e~~----aPV~i~GDiHGq~~DLlrlf~-~~g~~pp~~~-ylFLGDYVDRG~~s 103 (331)
T KOG0374|consen 30 VPLSKSEIIKLCDKAREIFLSQPTLLELS----APVKIVGDIHGQFGDLLRLFD-LLGSFPPDQN-YVFLGDYVDRGKQS 103 (331)
T ss_pred eeccHHHHHHHHHHHHHHhcCCCceeecC----CCEEEEccCcCCHHHHHHHHH-hcCCCCCccc-EEEecccccCCccc
Confidence 34889999999999999999999999998 699999999999999999999 999 886666 99999999999999
Q ss_pred HHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCC
Q 013080 221 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 300 (450)
Q Consensus 221 lEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi 300 (450)
+||+.+|+++|++||++|++||||||.+.+|..|||++||.++|+. ..+|..|++.|++||++|+|+++++|+|||+
T Consensus 104 lE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~---~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGl 180 (331)
T KOG0374|consen 104 LETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE---IKLWKAFNDAFNCLPLAALIDGKILCMHGGL 180 (331)
T ss_pred eEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch---HHHHHHHHHHHhhCchhheecceEEEecCCC
Confidence 9999999999999999999999999999999999999999999985 3599999999999999999999999999999
Q ss_pred CCCcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCC-CCcccccCCCeeeeChhhHHH
Q 013080 301 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEE 379 (450)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~-~g~~~n~RG~g~~fG~d~~~~ 379 (450)
++ .+.++++|+.|.||. ++++.++++|+|||||... .||.+|.||.++.||++++++
T Consensus 181 sp---------------------~l~~~~~i~~i~rp~-~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~ 238 (331)
T KOG0374|consen 181 SP---------------------HLKSLDQIRAIPRPT-DSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVED 238 (331)
T ss_pred Ch---------------------hhcChHHHhhccCCc-CCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHH
Confidence 76 457899999999995 6667889999999999987 899999999999999999999
Q ss_pred HHHhcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcceeEEEeee
Q 013080 380 FLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSRR 447 (450)
Q Consensus 380 FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~~ 447 (450)
||+++++++||||||+ +.+||++.. +++++||||||+||+...|+||+|++.+
T Consensus 239 f~~~~~ldlivRaHqv------------v~dGyeffa---~r~lvTIFSAP~Ycg~~~n~gavm~Vd~ 291 (331)
T KOG0374|consen 239 FCKKLDLDLIVRAHQV------------VEDGYEFFA---GRKLVTIFSAPNYCGEFDNAGAVMRVDK 291 (331)
T ss_pred HHHHhCcceEEEcCcc------------ccccceEec---CceEEEEecCchhccccCCceEEEEECC
Confidence 9999999999999994 799999854 6899999999999999999999999865
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=4.8e-66 Score=512.90 Aligned_cols=270 Identities=38% Similarity=0.661 Sum_probs=247.4
Q ss_pred HHHHHHhhhcCCCCccccccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCC
Q 013080 123 QLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPS 202 (450)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~ 202 (450)
+.+++.+.... .++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|+++
T Consensus 3 ~~~~~~~~~~~---------~l~~~~~~~l~~~~~~il~~e~~~~~i~----~~i~vvGDIHG~~~dL~~ll~-~~~~~~ 68 (285)
T cd07415 3 DKWIEQLKKCE---------LLPESEVKSLCEKAKEILVKESNVQRVR----SPVTVCGDIHGQFYDLLELFR-VGGDPP 68 (285)
T ss_pred HHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCCEEecC----CCEEEEEeCCCCHHHHHHHHH-HcCCCC
Confidence 44566655432 5889999999999999999999999997 689999999999999999999 899877
Q ss_pred CCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhc
Q 013080 203 DHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRT 282 (450)
Q Consensus 203 ~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~ 282 (450)
.+. |||||||||||++|+||+.+|+++|+.+|+++++||||||.+.++..|||..|+..+|+. ..+|..+.++|++
T Consensus 69 ~~~-~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~---~~l~~~~~~~f~~ 144 (285)
T cd07415 69 DTN-YLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGN---ANVWKYCTDLFDY 144 (285)
T ss_pred CCe-EEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCc---hHHHHHHHHHHHH
Confidence 655 999999999999999999999999999999999999999999999999999999999985 2599999999999
Q ss_pred CCcceeeeceEEEEecCCCCCcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCCCCcc
Q 013080 283 LPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLR 362 (450)
Q Consensus 283 LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~~g~~ 362 (450)
||++|+++++++||||||++. +.++++|.++.|+.. ++.++++.|+|||||....+|.
T Consensus 145 lPlaaii~~~i~cvHgGi~p~---------------------~~~~~~i~~i~r~~~-~~~~~~~~dllWsDP~~~~~~~ 202 (285)
T cd07415 145 LPLAALIDNQIFCVHGGLSPS---------------------IDTLDQIRAIDRFQE-VPHEGPMCDLLWSDPDDIEGWG 202 (285)
T ss_pred hHHHhEeCCeEEEEcCCCCCC---------------------cccHHHhhcccCCCC-CCCCCCccceEecCCCccCCCC
Confidence 999999999999999999764 478999999999974 4456788999999999889999
Q ss_pred cccCCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcceeE
Q 013080 363 ENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCT 442 (450)
Q Consensus 363 ~n~RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~ 442 (450)
+|.||.|+.||++++++||++||+++||||||+ +++||++.| +|+|+|||||||||+...|.|++
T Consensus 203 ~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~~TvfSa~~y~~~~~n~~a~ 267 (285)
T cd07415 203 ISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQL------------VMEGYQWMF---DDKLVTVWSAPNYCYRCGNVASI 267 (285)
T ss_pred cCCCCCccccCHHHHHHHHHHCCCeEEEEcCcc------------ccceEEEec---CCcEEEEecCCcccCCCCceEEE
Confidence 999999999999999999999999999999995 689999988 49999999999999999999999
Q ss_pred EEeee
Q 013080 443 MHSRR 447 (450)
Q Consensus 443 l~~~~ 447 (450)
|.+..
T Consensus 268 l~i~~ 272 (285)
T cd07415 268 MELDE 272 (285)
T ss_pred EEECC
Confidence 99864
No 8
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=4.5e-66 Score=518.31 Aligned_cols=257 Identities=33% Similarity=0.626 Sum_probs=241.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHH
Q 013080 143 VMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE 222 (450)
Q Consensus 143 ~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slE 222 (450)
.|+.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|+++.+. |||||||||||++|+|
T Consensus 31 ~l~~~~i~~l~~~~~~il~~ep~ll~i~----~~i~vvGDIHG~~~dL~~l~~-~~g~~~~~~-ylfLGDyVDRG~~s~e 104 (320)
T PTZ00480 31 NLTEAEVRGLCIKARDIFISQPILLELE----APLKICGDVHGQYFDLLRLFE-YGGYPPESN-YLFLGDYVDRGKQSLE 104 (320)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCceEecC----CCeEEEeecccCHHHHHHHHH-hcCCCCcce-EEEeceecCCCCCcHH
Confidence 6899999999999999999999999997 689999999999999999999 999987766 9999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCCC
Q 013080 223 VLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFR 302 (450)
Q Consensus 223 vl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~~ 302 (450)
|+.+|+++|+.+|++|++||||||...++..|||..|+..+|+. .+|..++++|++||+||+|++++|||||||++
T Consensus 105 vl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~----~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p 180 (320)
T PTZ00480 105 TICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTI----KLWKTFTDCFNCLPVAALIDEKILCMHGGLSP 180 (320)
T ss_pred HHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCH----HHHHHHHHHHHhccHhheecCcEEEEcCCcCc
Confidence 99999999999999999999999999999999999999999975 49999999999999999999999999999976
Q ss_pred CcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCC-CCcccccCCCeeeeChhhHHHHH
Q 013080 303 RTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEEFL 381 (450)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~-~g~~~n~RG~g~~fG~d~~~~FL 381 (450)
. +.++++|+++.|+.. .++++++.|+|||||... .+|.+|.||.|++||++++++||
T Consensus 181 ~---------------------~~~l~~i~~i~rp~~-~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl 238 (320)
T PTZ00480 181 E---------------------LSNLEQIRRIMRPTD-VPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFL 238 (320)
T ss_pred c---------------------cCCHHHHhcccCCCC-CCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHH
Confidence 3 478999999999974 456788999999999875 78999999999999999999999
Q ss_pred HhcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcceeEEEee
Q 013080 382 KENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 446 (450)
Q Consensus 382 ~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~ 446 (450)
++||+++||||||+ +++||++.| +++|+|||||||||+...|.|++|.+.
T Consensus 239 ~~n~l~~IiR~Hq~------------v~~G~~~~~---~~~~iTvFSa~~Y~~~~~N~ga~l~i~ 288 (320)
T PTZ00480 239 KKHELDLICRAHQV------------VEDGYEFFS---KRQLVTLFSAPNYCGEFDNAGSMMTID 288 (320)
T ss_pred HhCCCcEEEEcCcc------------ccCceEEeC---CCcEEEEeCCcccCCCCCccEEEEEEC
Confidence 99999999999995 689999987 599999999999999999999999875
No 9
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.3e-65 Score=512.89 Aligned_cols=271 Identities=33% Similarity=0.569 Sum_probs=246.2
Q ss_pred HHHHHHHhhhcCCCCccccccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCC
Q 013080 122 IQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFP 201 (450)
Q Consensus 122 i~~l~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~ 201 (450)
++.+++.+.... .++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|.+
T Consensus 3 ~~~~~~~~~~~~---------~l~~~~i~~l~~~~~~il~~e~~~~~i~----~~i~vvGDIHG~~~~L~~l~~-~~~~~ 68 (303)
T PTZ00239 3 IDRHIATLLNGG---------CLPERDLKLICERAKEIFLEESNVQPVR----APVNVCGDIHGQFYDLQALFK-EGGDI 68 (303)
T ss_pred HHHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHhCCCeEecC----CCEEEEEeCCCCHHHHHHHHH-hcCCC
Confidence 344566665432 5889999999999999999999999997 689999999999999999999 88887
Q ss_pred CCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhh
Q 013080 202 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 281 (450)
Q Consensus 202 ~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~ 281 (450)
+.+. |||||||||||++|+||+.+|+++|+.+|.+++++|||||.+.++..|||..|+..+|+.. .+|+.++++|+
T Consensus 69 ~~~~-~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~---~~~~~~~~~f~ 144 (303)
T PTZ00239 69 PNAN-YIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS---NPWRLFMDVFD 144 (303)
T ss_pred CCce-EEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh---hHHHHHHHHHH
Confidence 7655 9999999999999999999999999999999999999999999999999999999999863 58999999999
Q ss_pred cCCcceeeeceEEEEecCCCCCcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCCCCc
Q 013080 282 TLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGL 361 (450)
Q Consensus 282 ~LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~~g~ 361 (450)
+||++++++++++||||||++. +.++++|.++.|+.. ++.++.++|+|||||....+|
T Consensus 145 ~LPlaaii~~~i~cvHgGi~p~---------------------~~~l~~i~~i~r~~~-~~~~~~~~dllWsDP~~~~~~ 202 (303)
T PTZ00239 145 CLPLAALIEGQILCVHGGLSPD---------------------MRTIDQIRTIDRKIE-IPHEGPFCDLMWSDPEEVEYW 202 (303)
T ss_pred hCchheEEcCeEEEEcCccCcc---------------------cccHhhhccccCCCC-CCCCCCceeeEecCccccCCC
Confidence 9999999999999999999763 478999999999974 445677899999999988899
Q ss_pred ccccCCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCccee
Q 013080 362 RENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGC 441 (450)
Q Consensus 362 ~~n~RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~ 441 (450)
.+|.||.|+.||++++++||++||+++||||||+ +++||++.|+ +++|||||||||||+...|.|+
T Consensus 203 ~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~--~~~~iTvfSa~~Y~~~~~N~~a 268 (303)
T PTZ00239 203 AVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQL------------VMEGYKYWFP--DQNLVTVWSAPNYCYRCGNIAS 268 (303)
T ss_pred ccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh------------hccceEEEeC--CCeEEEEECCCcccCCCCceEE
Confidence 9999999999999999999999999999999995 6899998763 4669999999999999999999
Q ss_pred EEEee
Q 013080 442 TMHSR 446 (450)
Q Consensus 442 ~l~~~ 446 (450)
+|.+.
T Consensus 269 il~i~ 273 (303)
T PTZ00239 269 ILCLD 273 (303)
T ss_pred EEEEC
Confidence 99875
No 10
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=3e-66 Score=481.72 Aligned_cols=260 Identities=34% Similarity=0.564 Sum_probs=243.0
Q ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchH
Q 013080 142 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL 221 (450)
Q Consensus 142 ~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl 221 (450)
+.||+.++..||+.++++|..|.|++-++ .|++|||||||||+||+.+|+ ..|--+.++ |||+|||||||.+|+
T Consensus 17 kyLpE~elk~LCe~v~d~L~eEsNvqPV~----tPVTvCGDIHGQFyDL~eLFr-tgG~vP~tn-YiFmGDfVDRGyySL 90 (306)
T KOG0373|consen 17 KYLPENELKRLCEMVKDILMEESNVQPVS----TPVTVCGDIHGQFYDLLELFR-TGGQVPDTN-YIFMGDFVDRGYYSL 90 (306)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhcCccccC----CCeeEeeccchhHHHHHHHHH-hcCCCCCcc-eEEeccccccccccH
Confidence 36899999999999999999999999998 689999999999999999999 777777666 999999999999999
Q ss_pred HHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCC
Q 013080 222 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 301 (450)
Q Consensus 222 Evl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~ 301 (450)
|++.+|+.||..||+++.+||||||++.+...|||++||..|||.. ..|+.+.++|+.|++||+|+++++|||||++
T Consensus 91 EtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna---n~wkycckVFD~LtlaAiID~~vLCVHGGLS 167 (306)
T KOG0373|consen 91 ETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA---NVWKYCCKVFDFLTLAAIIDEKVLCVHGGLS 167 (306)
T ss_pred HHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc---hHHHHHHHHHhhhhHHHHhcCcEEEEcCCCC
Confidence 9999999999999999999999999999999999999999999987 7999999999999999999999999999997
Q ss_pred CCcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCCCCcccccCCCeeeeChhhHHHHH
Q 013080 302 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFL 381 (450)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~~g~~~n~RG~g~~fG~d~~~~FL 381 (450)
| ++.++|+|+.+.|..+.|. .+..+|++||||..-..|..|+||+|++||.+++.+|+
T Consensus 168 P---------------------dirtlDqir~i~R~qEiPh-~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~ 225 (306)
T KOG0373|consen 168 P---------------------DIRTLDQIRLIERNQEIPH-EGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFN 225 (306)
T ss_pred c---------------------cceeHHHHHhHHhhccCCC-CCCccceeccChhhhhhheeCCCCcceeechhhhHHHH
Confidence 5 4589999999999987664 46789999999999999999999999999999999999
Q ss_pred HhcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcceeEEEee
Q 013080 382 KENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 446 (450)
Q Consensus 382 ~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~ 446 (450)
..|++++|.|+|| .|++||++.++ ...++|||||||||..-.|.++||.+.
T Consensus 226 ~iN~L~LicRaHQ------------LV~EG~KymF~--eK~lvTVWSAPNYCYRCGNvAsi~~~d 276 (306)
T KOG0373|consen 226 HINNLNLICRAHQ------------LVQEGFKYMFD--EKGLVTVWSAPNYCYRCGNVASIMSFD 276 (306)
T ss_pred hccchHHHHhHHH------------HHHhhHHhccC--CCCEEEEecCCchhhhccCeeeEEEec
Confidence 9999999999999 58999999764 334999999999999988999998764
No 11
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=4.4e-65 Score=507.48 Aligned_cols=259 Identities=31% Similarity=0.603 Sum_probs=241.0
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCch
Q 013080 141 RNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG 220 (450)
Q Consensus 141 ~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~s 220 (450)
...++.+++.+||.+|+++|++||++++++ .+++||||||||+.+|.++|+ ..++++.+. |||||||||||++|
T Consensus 22 ~~~i~~~~i~~l~~~~~~il~~e~~ll~i~----~p~~ViGDIHG~~~~L~~l~~-~~~~~~~~~-~lfLGDyVDRG~~s 95 (294)
T PTZ00244 22 QILIREEDIRAVLTEVREIFMSQPMLLEIR----PPVRVCGDTHGQYYDLLRIFE-KCGFPPYSN-YLFLGDYVDRGKHS 95 (294)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeEecc----CCceeeccCCCCHHHHHHHHH-HcCCCCccc-EEEeeeEecCCCCH
Confidence 346889999999999999999999999997 579999999999999999999 899987666 99999999999999
Q ss_pred HHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCC
Q 013080 221 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 300 (450)
Q Consensus 221 lEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi 300 (450)
+||+.+++++|+.+|.+++++|||||...++..|||..|+..+|+. .+|..+.++|++||++++++++++|||||+
T Consensus 96 ~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~----~l~~~~~~~f~~lPlaaii~~~il~vHgGi 171 (294)
T PTZ00244 96 VETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNI----KLFKAFTDVFNTMPVCCVISEKIICMHGGL 171 (294)
T ss_pred HHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhH----HHHHHHHHHHHhCchheEecCeeEEEcCCC
Confidence 9999999999999999999999999999999999999999999975 499999999999999999999999999999
Q ss_pred CCCcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCC-CCcccccCCCeeeeChhhHHH
Q 013080 301 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEE 379 (450)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~-~g~~~n~RG~g~~fG~d~~~~ 379 (450)
++. +.++++++.+.|+.. .++++++.|+|||||... .+|.+|.||.|+.||++++++
T Consensus 172 ~p~---------------------~~~l~~i~~i~rp~~-~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~ 229 (294)
T PTZ00244 172 SPD---------------------LTSLASVNEIERPCD-VPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVND 229 (294)
T ss_pred Cch---------------------hhHHHHhhhhccccC-CCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHH
Confidence 763 367999999999974 456788999999999875 799999999999999999999
Q ss_pred HHHhcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcceeEEEee
Q 013080 380 FLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 446 (450)
Q Consensus 380 FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~ 446 (450)
||++||+++||||||+ +++||++.| +++|+|||||||||+...|.|++|.+.
T Consensus 230 Fl~~n~l~~iiR~Hq~------------~~~G~~~~~---~~~~iTvfSa~~Y~~~~~N~~a~l~i~ 281 (294)
T PTZ00244 230 FLDMVDMDLIVRAHQV------------MERGYGFFA---SRQLVTVFSAPNYCGEFDNDAAVMNID 281 (294)
T ss_pred HHHHcCCcEEEEcCcc------------ccCceEEcC---CCeEEEEeCCccccCCCCceEEEEEEC
Confidence 9999999999999995 689999977 599999999999999999999999885
No 12
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=5.8e-65 Score=509.76 Aligned_cols=272 Identities=35% Similarity=0.610 Sum_probs=243.7
Q ss_pred HHHHHHHhhhcCCCCccccccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCC
Q 013080 122 IQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFP 201 (450)
Q Consensus 122 i~~l~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~ 201 (450)
++.|++.|...+ .|+.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|.+
T Consensus 3 ~~~~~~~~~~~~---------~l~~~~i~~l~~~~~~il~~e~~l~~i~----~~i~ViGDIHG~~~dL~~l~~-~~g~~ 68 (305)
T cd07416 3 IDVLKAHFMREG---------RLSEEDALRIITEGAEILRQEPNLLRIE----APVTVCGDIHGQFYDLLKLFE-VGGSP 68 (305)
T ss_pred HHHHHHHHHcCC---------CCCHHHHHHHHHHHHHHHHhCCCeEccC----CCEEEEEeCCCCHHHHHHHHH-hcCCC
Confidence 345667776543 5889999999999999999999999997 689999999999999999999 99988
Q ss_pred CCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhh
Q 013080 202 SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFR 281 (450)
Q Consensus 202 ~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~ 281 (450)
+.+. |||||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..|+..+|+. .+|..++++|+
T Consensus 69 ~~~~-ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~----~l~~~~~~~f~ 143 (305)
T cd07416 69 ANTR-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMEAFD 143 (305)
T ss_pred CCce-EEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccH----HHHHHHHHHHh
Confidence 7655 999999999999999999999999999999999999999999999999999999999864 49999999999
Q ss_pred cCCcceeeeceEEEEecCCCCCcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCCC--
Q 013080 282 TLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEA-- 359 (450)
Q Consensus 282 ~LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~~-- 359 (450)
+||++++++++++|||||+++. +.++++|.++.|+.. ++..++++|+|||||....
T Consensus 144 ~LPlaaii~~~i~~vHGGi~p~---------------------~~~l~~i~~i~r~~~-~~~~~~~~dllWsDP~~~~~~ 201 (305)
T cd07416 144 CLPLAALMNQQFLCVHGGLSPE---------------------LKTLDDIRKLDRFRE-PPAFGPMCDLLWSDPLEDFGN 201 (305)
T ss_pred hccceeEEcCCEEEEcCCCCcc---------------------cccHHHhcccCCCCC-CCCCCcceeeeecCccccccc
Confidence 9999999999999999999763 478999999999874 4466789999999997652
Q ss_pred -----Ccccc-cCCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCceecccC---CCCeEEEEecCC
Q 013080 360 -----GLREN-TKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDT---VSGELYTLFTAP 430 (450)
Q Consensus 360 -----g~~~n-~RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~---~~gk~iTVFSA~ 430 (450)
+|.+| .||.|+.||++++++||++||+++||||||+ +++||++.|+. ..++||||||||
T Consensus 202 ~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~~~~~~~~~~iTvFSa~ 269 (305)
T cd07416 202 EKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEA------------QDAGYRMYRKSQTTGFPSLITIFSAP 269 (305)
T ss_pred ccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccc------------cccceEEecCCCcCCCCcEEEEeCCc
Confidence 47776 5999999999999999999999999999995 68999998741 113999999999
Q ss_pred CcccccCcceeEEEee
Q 013080 431 NYPQVQILLGCTMHSR 446 (450)
Q Consensus 431 nY~~~~~~~g~~l~~~ 446 (450)
|||+...|.|++|.+.
T Consensus 270 ~Y~~~~~N~~a~l~i~ 285 (305)
T cd07416 270 NYLDVYNNKAAVLKYE 285 (305)
T ss_pred cccCCCCceEEEEEEc
Confidence 9999999999999875
No 13
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=7.5e-65 Score=506.11 Aligned_cols=259 Identities=34% Similarity=0.637 Sum_probs=241.2
Q ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchH
Q 013080 142 NVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL 221 (450)
Q Consensus 142 ~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl 221 (450)
..++.+++.+||++|+++|++||++++++ .+++||||||||+.+|.++|+ ..|+++.+. |||||||||||++|+
T Consensus 21 ~~~~~~~i~~l~~~~~~il~~ep~~l~i~----~~i~viGDIHG~~~~L~~l~~-~~~~~~~~~-~lfLGDyVDRG~~s~ 94 (293)
T cd07414 21 VQLTEAEIRGLCLKSREIFLSQPILLELE----APLKICGDIHGQYYDLLRLFE-YGGFPPESN-YLFLGDYVDRGKQSL 94 (293)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCeEecC----CceEEEEecCCCHHHHHHHHH-hcCCCCcce-EEEEeeEecCCCCcH
Confidence 36889999999999999999999999997 689999999999999999999 999987665 999999999999999
Q ss_pred HHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCC
Q 013080 222 EVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 301 (450)
Q Consensus 222 Evl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~ 301 (450)
|++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+. .+|..+.++|++||++|+++++++|||||++
T Consensus 95 e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~----~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~ 170 (293)
T cd07414 95 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCFNCLPVAAIIDEKIFCMHGGLS 170 (293)
T ss_pred HHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhH----HHHHHHHHHHHHhHHHHhhCCcEEEEccCCC
Confidence 999999999999999999999999999999999999999999975 4999999999999999999999999999997
Q ss_pred CCcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCC-CCcccccCCCeeeeChhhHHHH
Q 013080 302 RRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE-AGLRENTKKFGLLWGPDCTEEF 380 (450)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~-~g~~~n~RG~g~~fG~d~~~~F 380 (450)
+. +.++++|+++.|+.. .++.+++.|+|||||... .+|.+|.||.|+.||++++++|
T Consensus 171 p~---------------------~~~l~~i~~i~r~~~-~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~F 228 (293)
T cd07414 171 PD---------------------LQSMEQIRRIMRPTD-VPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKF 228 (293)
T ss_pred cc---------------------cCcHHHHhcccCCCC-CCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHH
Confidence 63 478999999999974 456778999999999875 7899999999999999999999
Q ss_pred HHhcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcceeEEEeee
Q 013080 381 LKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSRR 447 (450)
Q Consensus 381 L~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~~ 447 (450)
|++||+++||||||+ +++||++.| +++|||||||||||+...|.|++|.+..
T Consensus 229 l~~n~l~~iiR~He~------------~~~G~~~~~---~~~~iTvfSa~~Y~~~~~N~~a~l~i~~ 280 (293)
T cd07414 229 LNKHDLDLICRAHQV------------VEDGYEFFA---KRQLVTLFSAPNYCGEFDNAGAMMSVDE 280 (293)
T ss_pred HHHcCCeEEEECCcc------------ccCeEEEeC---CCcEEEEecCCcccCCCCceEEEEEECC
Confidence 999999999999995 689999977 5999999999999999999999998853
No 14
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-66 Score=516.35 Aligned_cols=297 Identities=32% Similarity=0.541 Sum_probs=270.5
Q ss_pred cCcccCC--CCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCccccccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCC
Q 013080 98 ENLTKEQ--DTLPLSWPRNGRISLEWIQLLISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDS 175 (450)
Q Consensus 98 ~~i~~~~--~~~~~~~p~~~~~t~~~i~~l~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~ 175 (450)
+++.+++ .||.+++| +++..+..|+++|+..+ +||+.+++.|+.+|+++|++.||+-+|++..+.
T Consensus 99 ~sidv~d~y~Gp~ls~P----l~~~~i~~lieaFk~kq---------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~ 165 (631)
T KOG0377|consen 99 TSIDVPDSYNGPKLSLP----LRKNHIDLLIEAFKKKQ---------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQ 165 (631)
T ss_pred cceecCccCCCcccccC----cCchHHHHHHHHHHHhh---------hccHHHHHHHHHHHHHHHHhCCCCCcccccccc
Confidence 5555555 69999999 99999999999999764 789999999999999999999999999998888
Q ss_pred ceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccC
Q 013080 176 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYG 255 (450)
Q Consensus 176 ~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~yg 255 (450)
.|+||||+||.++||.-||. +.|+|+..++|||+||+||||.+|+|||..|+++.+.||+.+++.|||||..+||..||
T Consensus 166 qVTiCGDLHGklDDL~~I~y-KNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYG 244 (631)
T KOG0377|consen 166 QVTICGDLHGKLDDLLVILY-KNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYG 244 (631)
T ss_pred ceEEeccccccccceEEEEe-cCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHh
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCCCCcCCCcccccccccccccccCCCCChHHHhhhc
Q 013080 256 FWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVN 335 (450)
Q Consensus 256 f~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~ 335 (450)
|..|+..||... +..+...+.++|+|||++.+|+.+||+||||++.++++. -|.+|.
T Consensus 245 F~kEv~~KYk~~-~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd~Tdl~----------------------ll~kIe 301 (631)
T KOG0377|consen 245 FIKEVESKYKRH-GKRILRFLEEVYRWLPIGTIIDSRILVVHGGISDSTDLD----------------------LLDKIE 301 (631)
T ss_pred HHHHHHHHhhhc-ccHHHHHHHHHHHhcchhhhcccceEEEecCcccchhHH----------------------HHhhhh
Confidence 999999999987 888999999999999999999999999999998775433 222222
Q ss_pred ccc---------------------ccCCCCcccccccccCCCCCCCccccc-CCCeeeeChhhHHHHHHhcCceEEEeec
Q 013080 336 RFL---------------------EDVPENDLLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSH 393 (450)
Q Consensus 336 R~~---------------------~~p~~~~l~~dlLWsDP~~~~g~~~n~-RG~g~~fG~d~~~~FL~~n~l~~IIRgH 393 (450)
|.. ....++..+.|+|||||....|+.||. ||.|++||||+|..||++++++++||||
T Consensus 302 R~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSH 381 (631)
T KOG0377|consen 302 RGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSH 381 (631)
T ss_pred ccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeec
Confidence 211 011256778999999999999999999 9999999999999999999999999999
Q ss_pred CCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcceeEEEee
Q 013080 394 EGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 446 (450)
Q Consensus 394 e~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~ 446 (450)
||+ ++||+++|+ ++|+|||||+||...++|-|+-+.+.
T Consensus 382 ECK------------peGyEf~Hd---~kvlTiFSASNYYe~GSNrGAYikl~ 419 (631)
T KOG0377|consen 382 ECK------------PEGYEFCHD---NKVLTIFSASNYYEIGSNRGAYIKLG 419 (631)
T ss_pred ccC------------CCcceeeeC---CeEEEEEeccchheecCCCceEEEeC
Confidence 985 899999995 99999999999999999999988754
No 15
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=6.6e-64 Score=494.97 Aligned_cols=257 Identities=40% Similarity=0.705 Sum_probs=238.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHH
Q 013080 144 MPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEV 223 (450)
Q Consensus 144 l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEv 223 (450)
++++++.+||++|+++|++||++++++ ++++||||||||+.+|.++|+ ..|.++.+. |||||||||||++|+||
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~----~~i~vvGDiHG~~~~l~~ll~-~~~~~~~~~-~vfLGD~VDrG~~s~e~ 74 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVS----APVTVCGDIHGQFDDLLRLFD-LNGPPPDTN-YVFLGDYVDRGPFSIEV 74 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeC----CCEEEEEeCcCCHHHHHHHHH-HcCCCCCce-EEEeCCccCCCCChHHH
Confidence 357899999999999999999999997 789999999999999999999 889876655 99999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCCCC
Q 013080 224 LLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRR 303 (450)
Q Consensus 224 l~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~~~ 303 (450)
+.+++++|+.+|+++++||||||.+.++..|||..|+..+|+. .+|+.+.++|++||++++++++++|||||+++.
T Consensus 75 l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~----~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~ 150 (271)
T smart00156 75 ILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGE----EIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD 150 (271)
T ss_pred HHHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCH----HHHHHHHHHHhhChhheEEcCeEEEEecCCCCc
Confidence 9999999999999999999999999999999999999999965 599999999999999999999999999999763
Q ss_pred cCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCC-CCCcccccCCCeeeeChhhHHHHHH
Q 013080 304 TCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSS-EAGLRENTKKFGLLWGPDCTEEFLK 382 (450)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~-~~g~~~n~RG~g~~fG~d~~~~FL~ 382 (450)
+.++++|+++.|+. +++++.++.|+|||||.. ..+|.+|.||.|+.||++++++||+
T Consensus 151 ---------------------~~~l~~i~~i~r~~-~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~ 208 (271)
T smart00156 151 ---------------------LTTLDDIRKLKRPQ-EPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLK 208 (271)
T ss_pred ---------------------cCCHHHHhcccCCC-CCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHH
Confidence 47899999999997 445678899999999964 4899999999999999999999999
Q ss_pred hcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcceeEEEeee
Q 013080 383 ENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSRR 447 (450)
Q Consensus 383 ~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~~ 447 (450)
+||+++||||||+ +++||++.| +++|+|||||||||+..+|.||+|.+..
T Consensus 209 ~n~l~~iiR~He~------------~~~G~~~~~---~~~~~TvfSa~~y~~~~~n~~a~~~i~~ 258 (271)
T smart00156 209 KNNLKLIIRAHQV------------VDDGYEFFH---DRKLVTIFSAPNYCGRFGNKAAVLKVDK 258 (271)
T ss_pred HCCCeEEEecCcc------------cCCcEEEec---CCcEEEEECCcccccCCCceEEEEEECC
Confidence 9999999999995 689999988 4999999999999999999999998854
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=9.1e-65 Score=498.55 Aligned_cols=287 Identities=33% Similarity=0.593 Sum_probs=249.1
Q ss_pred CCCCCCCCCCCCHHHHHH----------HHHHhhhcCCCCccccccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCc
Q 013080 107 LPLSWPRNGRISLEWIQL----------LISTFKWSSWKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSE 176 (450)
Q Consensus 107 ~~~~~p~~~~~t~~~i~~----------l~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~ 176 (450)
..+.+|++.++|.+.+-+ |-..|...+ .|.++.++.|+.++..+|++|+++++|+ +|
T Consensus 23 ~~Vp~p~s~~lT~~evfd~~~gkP~~~~Lr~Hf~~EG---------rl~ee~alrIi~~~a~llr~Eknmi~v~----AP 89 (517)
T KOG0375|consen 23 KAVPFPPSHRLTDEEVFDSRTGKPRHDVLRNHFIKEG---------RLEEEQALRIINEGAALLRQEKNMIEVE----AP 89 (517)
T ss_pred hcCCCCCcccCcHHHhhcCCCCCcchHHHHHHHHhhc---------chhHHHHHHHHHHHHHHHhcCCceEecc----CC
Confidence 346677777777664322 222333222 3778999999999999999999999998 79
Q ss_pred eEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCc
Q 013080 177 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGF 256 (450)
Q Consensus 177 i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf 256 (450)
|+|||||||||.||+++|+ ..|.|..++ |+|||||||||.+|+||+.+|.+||+.||..+++||||||++.+...+.|
T Consensus 90 iTVCGDIHGQf~DLmKLFE-VGG~PA~t~-YLFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTF 167 (517)
T KOG0375|consen 90 ITVCGDIHGQFFDLMKLFE-VGGSPANTR-YLFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTF 167 (517)
T ss_pred eeEecccchHHHHHHHHHH-ccCCcccce-eEeeccccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhH
Confidence 9999999999999999999 878777666 99999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCCCCcCCCcccccccccccccccCCCCChHHHhhhcc
Q 013080 257 WAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNR 336 (450)
Q Consensus 257 ~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R 336 (450)
..||.-||... +|+.+++.|++||+||+.++++||||||++| ++.+++||++++|
T Consensus 168 KqEc~iKYse~----vYdaCmesFd~LPLAAlmNqQflCVHGGlSP---------------------Ei~tl~DIr~l~R 222 (517)
T KOG0375|consen 168 KQECKIKYSER----VYDACMESFDCLPLAALMNQQFLCVHGGLSP---------------------EIHTLDDIRKLDR 222 (517)
T ss_pred HHHHhHhccHH----HHHHHHHHhccchHHHHhcCceEEecCCCCc---------------------ccccHHHHHhhhh
Confidence 99999999876 9999999999999999999999999999975 5689999999999
Q ss_pred ccccCCCCcccccccccCCCCC-------CCccccc-CCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCCCCccccc
Q 013080 337 FLEDVPENDLLSDVLWSDPSSE-------AGLRENT-KKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNM 408 (450)
Q Consensus 337 ~~~~p~~~~l~~dlLWsDP~~~-------~g~~~n~-RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v 408 (450)
.. +|+..+.|||+|||||.++ ..|.+|. ||+++.|...++.+||+.||+-.|||+||.+|+++.-
T Consensus 223 F~-EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRM------ 295 (517)
T KOG0375|consen 223 FK-EPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRM------ 295 (517)
T ss_pred cc-CCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhh------
Confidence 98 5778899999999999875 3577887 9999999999999999999999999999998765420
Q ss_pred cCCceecccCCCCeEEEEecCCCcccccCcceeEE
Q 013080 409 LNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTM 443 (450)
Q Consensus 409 ~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l 443 (450)
|+-..-++...+|||||||||.|+.+|-+++|
T Consensus 296 ---YrksqttGFPSLiTiFSAPNYLDvYnNKAAvL 327 (517)
T KOG0375|consen 296 ---YRKSQTTGFPSLITIFSAPNYLDVYNNKAAVL 327 (517)
T ss_pred ---hhcccccCCchheeeecCCchhhhhccHHHHh
Confidence 22222234578999999999999988887765
No 17
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=2.2e-62 Score=492.67 Aligned_cols=270 Identities=36% Similarity=0.616 Sum_probs=244.1
Q ss_pred ccccccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCC-------CceEEE
Q 013080 137 PKEFRNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSD-------HRYFVF 209 (450)
Q Consensus 137 ~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~-------~~~~vF 209 (450)
+...+..++.+++.+||++|.++|++||++++++ .+++||||||||+.+|.++|+ ..|+++. +..|||
T Consensus 14 ~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~----~~~~viGDIHG~~~~L~~ll~-~~g~~~~~~~~~~~~~~~vf 88 (311)
T cd07419 14 PTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLR----APIKIFGDIHGQFGDLMRLFD-EYGSPVTEAAGDIEYIDYLF 88 (311)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeC----CCEEEEEeccCCHHHHHHHHH-HcCCCcccccCCCcCceEEE
Confidence 4445567899999999999999999999999997 689999999999999999999 8888754 246999
Q ss_pred eccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCc--chhHHHHHHHHHhhcCCcce
Q 013080 210 NGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKK--DCKLVFDKCLECFRTLPLAT 287 (450)
Q Consensus 210 LGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~--~~~~l~~~~~~~f~~LPlaa 287 (450)
||||||||++|+||+.+|+++|+.+|++|++||||||.+.++..|||..++..+|+.. .+..+|..+.++|++||+++
T Consensus 89 LGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~a 168 (311)
T cd07419 89 LGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAA 168 (311)
T ss_pred ECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhh
Confidence 9999999999999999999999999999999999999999999999999999999862 24579999999999999999
Q ss_pred eeeceEEEEecCCCCCcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCC---CCcccc
Q 013080 288 IIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSE---AGLREN 364 (450)
Q Consensus 288 ii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~---~g~~~n 364 (450)
+++++++|||||+++. +.++++|+.+.|+...+..+.++.|+|||||... .++.+|
T Consensus 169 vi~~~~l~vHgGi~p~---------------------~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~ 227 (311)
T cd07419 169 IIEDKILCMHGGIGRS---------------------INHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPN 227 (311)
T ss_pred eecccEEEEccCCCCC---------------------CCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccC
Confidence 9999999999999764 4789999999999755556778999999999875 477777
Q ss_pred c---CCCe--eeeChhhHHHHHHhcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcc
Q 013080 365 T---KKFG--LLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILL 439 (450)
Q Consensus 365 ~---RG~g--~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~ 439 (450)
. ||.| +.||++++++||++||+++||||||+ +++||++.| +|+|+|||||||||+..+|.
T Consensus 228 ~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~------------~~~G~~~~~---~~~~iTvfSa~~y~~~~~n~ 292 (311)
T cd07419 228 AIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHEC------------VMDGFERFA---QGKLITLFSATNYCGTAGNA 292 (311)
T ss_pred CCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechh------------hhCCeEEeC---CCeEEEEecCCcccCCCCce
Confidence 6 9999 69999999999999999999999995 689999977 59999999999999999999
Q ss_pred eeEEEeee
Q 013080 440 GCTMHSRR 447 (450)
Q Consensus 440 g~~l~~~~ 447 (450)
||++.+.+
T Consensus 293 ~ai~~i~~ 300 (311)
T cd07419 293 GAILVLGR 300 (311)
T ss_pred EEEEEECC
Confidence 99999864
No 18
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-60 Score=452.18 Aligned_cols=258 Identities=34% Similarity=0.588 Sum_probs=239.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHH
Q 013080 143 VMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE 222 (450)
Q Consensus 143 ~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slE 222 (450)
.+++.++..+|+.|+++|.+|.++..+. .+++||||+||||++|+++|+ +.|..++.+ |+|+|||||||++|+|
T Consensus 32 ~lse~~v~~lc~~a~~~L~~e~nV~~v~----~pvtvcGDvHGqf~dl~ELfk-iGG~~pdtn-ylfmGDyvdrGy~Sve 105 (319)
T KOG0371|consen 32 PLSEVDVSSLCLLAKEILDKEENVQPVN----CPVTVCGDVHGQFHDLIELFK-IGGLAPDTN-YLFMGDYVDRGYYSVE 105 (319)
T ss_pred CCccccchhHHHHHHHHHhccccccccc----cceEEecCcchhHHHHHHHHH-ccCCCCCcc-eeeeeeecccccchHH
Confidence 5778889999999999999999999998 689999999999999999999 777777666 9999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCCC
Q 013080 223 VLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFR 302 (450)
Q Consensus 223 vl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~~ 302 (450)
++.+|.++|++||++|.+||||||++.+...|||++||.+|||.. .+|..|.+.|+.+|+.|+|+++|||+|||++|
T Consensus 106 tVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a---nvw~~Ftdlfdy~P~tali~~~ifc~HGgLsp 182 (319)
T KOG0371|consen 106 TVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLFDYLPLTALIESKIFCLHGGLSP 182 (319)
T ss_pred HHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc---cchHHhhhhhhccchHhhhccceeeccCCcCc
Confidence 999999999999999999999999999999999999999999876 69999999999999999999999999999977
Q ss_pred CcCCCcccccccccccccccCCCCChHHHhhhccccccCCCCcccccccccCCCCCCCcccccCCCeeeeChhhHHHHHH
Q 013080 303 RTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLK 382 (450)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~~g~~~n~RG~g~~fG~d~~~~FL~ 382 (450)
+ +.+++.++.++|..+.| -++.++|+|||||+...||..++||+|+.||.+..++|-.
T Consensus 183 s---------------------i~tld~~r~~dr~~evp-hegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~ 240 (319)
T KOG0371|consen 183 S---------------------IDTLDLIRLLDRIQEVP-HEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNH 240 (319)
T ss_pred c---------------------cchHHHHHHHHHhhccc-CCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhc
Confidence 4 48899999999977555 4567899999999999999999999999999999999999
Q ss_pred hcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCcccccCcceeEEEee
Q 013080 383 ENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQILLGCTMHSR 446 (450)
Q Consensus 383 ~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l~~~ 446 (450)
+||+++|-|+|| .+++||.+.|+ ..++|+|||||||.--.|.++|+.++
T Consensus 241 ~n~lslisRahq------------lvm~g~nW~~~---~~~vtiFSapnycYrcgn~a~i~e~d 289 (319)
T KOG0371|consen 241 KNGLSLISRAHQ------------LVMEGYNWYHL---WNVVTIFSAPNYCYRCGNQAAIMERD 289 (319)
T ss_pred cCCchHhHHHHH------------HHhcccceeee---cceeEEccCCchhhccccHHHHhhhh
Confidence 999999999999 48999999995 77889999999999888888877653
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=4.2e-32 Score=259.00 Aligned_cols=216 Identities=38% Similarity=0.581 Sum_probs=164.9
Q ss_pred EEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCch
Q 013080 178 IVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFW 257 (450)
Q Consensus 178 ~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~ 257 (450)
+|||||||++++|.++++ ..+.++.+ .+||+|||||||+.+.+++.+++.++.. |.++++|+||||.+.++...++.
T Consensus 1 ~~igDiHg~~~~l~~~l~-~~~~~~~d-~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~ 77 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLE-KIGFPPND-KLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFY 77 (225)
T ss_pred CEEeCCCCCHHHHHHHHH-HhCCCCCC-EEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCc
Confidence 589999999999999999 88876554 4999999999999999999999999877 88999999999999887766655
Q ss_pred HHHH-----HHhCCcchhHHHHHHHHHhhcCCcceeeec-eEEEEecCCCCCcCCCcccccccccccccccCCCCChHHH
Q 013080 258 AELC-----TKFGKKDCKLVFDKCLECFRTLPLATIIAQ-GVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLREF 331 (450)
Q Consensus 258 ~e~~-----~ky~~~~~~~l~~~~~~~f~~LPlaaii~~-~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i 331 (450)
.+.. ..........++..+.+++..||+++.++. +++|||||+++.. ....+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~---------------------~~~~~~ 136 (225)
T cd00144 78 DEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGL---------------------PLEEQI 136 (225)
T ss_pred chhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCcc---------------------chHHhh
Confidence 4321 011111234578889999999999999976 9999999997642 111111
Q ss_pred hhhccccccCCCCcccccccccCCCCCCCccc-ccCCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCCCCccccccC
Q 013080 332 AKVNRFLEDVPENDLLSDVLWSDPSSEAGLRE-NTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGADDARNMLN 410 (450)
Q Consensus 332 ~~i~R~~~~p~~~~l~~dlLWsDP~~~~g~~~-n~RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~ 410 (450)
. .........+++|++|........ +.++. |+++++.|++.++.+.|||||++ +..
T Consensus 137 ~-------~~~~~~~~~~~lw~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~------------~~~ 193 (225)
T cd00144 137 K-------EEPEDQLPEDLLWSDPLELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTP------------VEE 193 (225)
T ss_pred h-------cCcccccceeeeecCCCCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCcc------------ccC
Confidence 1 112345678999999986644333 22444 99999999999999999999996 456
Q ss_pred CceecccCCCCeEEEEecCCCcccccCcceeEE
Q 013080 411 GYSKDHDTVSGELYTLFTAPNYPQVQILLGCTM 443 (450)
Q Consensus 411 Gy~~~h~~~~gk~iTVFSA~nY~~~~~~~g~~l 443 (450)
|+.... .++++||+|++.|++...+.++.+
T Consensus 194 ~~~~~~---~~~~i~IDtg~~~~~~~~~~l~~~ 223 (225)
T cd00144 194 GYEFGH---DGNLITIDSGCNYCGGGGNKLAAL 223 (225)
T ss_pred ccEEcC---CCCEEEEecCCcccCCCCccEEEE
Confidence 664323 489999999999987655555544
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.92 E-value=3.7e-24 Score=208.95 Aligned_cols=126 Identities=21% Similarity=0.414 Sum_probs=98.1
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCC--------CCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFP--------SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 246 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~--------~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE 246 (450)
++++||||||||++.|.++|+ .+++. ++++.+||||||||||++|.|||.+|+.+. .+.++++||||||
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~-~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE 77 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTE-KLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHC 77 (245)
T ss_pred CceEEEEECccCHHHHHHHHH-HcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccH
Confidence 478999999999999999999 87764 345569999999999999999999998884 5568999999999
Q ss_pred ccccccccC-------chHHHHHHhCCc---chhHHHHHHHHHhhcCCcceeee-ceEEEEecCCCCC
Q 013080 247 TKNCTLAYG-------FWAELCTKFGKK---DCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRR 303 (450)
Q Consensus 247 ~~~~~~~yg-------f~~e~~~ky~~~---~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGi~~~ 303 (450)
.++++...+ ...+....|... ....+++.+.++|+.||++..++ ++++|||||+.+.
T Consensus 78 ~~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 78 NKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 987653221 112233344321 12357788999999999988775 6799999999653
No 21
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.89 E-value=2.6e-22 Score=194.46 Aligned_cols=123 Identities=23% Similarity=0.402 Sum_probs=97.2
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCC---------CceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSD---------HRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 245 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~---------~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNH 245 (450)
++|.||||||||+.+|.++|+ .+++..+ .+.+||||||||||++|.|||.+|+.++. +.++++|+|||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~-~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNH 77 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLE-KLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNH 77 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHH-HcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCc
Confidence 479999999999999999999 8876532 35699999999999999999999998864 45799999999
Q ss_pred cccccccc--------cCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeee-ceEEEEecCCCC
Q 013080 246 ETKNCTLA--------YGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFR 302 (450)
Q Consensus 246 E~~~~~~~--------ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGi~~ 302 (450)
|.++++.. .|+. +....+... ...+.+.+.+||+.||+...++ ++++|||||+++
T Consensus 78 E~~l~~~~~~~~~~~~~~~~-~t~~~~~~~-~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~ 141 (234)
T cd07423 78 DNKLYRKLQGRNVKITHGLE-ETVAQLEAE-SEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKE 141 (234)
T ss_pred HHHHHHHhcCCCccccCccc-chHHHHhhc-cHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCCh
Confidence 99876532 2222 223334322 3457788899999999988775 579999999864
No 22
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.89 E-value=5e-23 Score=203.14 Aligned_cols=120 Identities=24% Similarity=0.346 Sum_probs=97.4
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccccccccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 254 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~y 254 (450)
|.++||||||||++.|.++|+ .+++.+..+.++|+||+|||||+|+|||.++.++. +++++|+||||.+.+...+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~-~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~ 75 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLE-RVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFA 75 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHH-HhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhc
Confidence 468999999999999999999 88877666679999999999999999999998763 4788999999999888777
Q ss_pred Cch-----HHHHHHhCCcchhHHHHHHHHHhhcCCcceeee-ceEEEEecCCCCC
Q 013080 255 GFW-----AELCTKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHGGLFRR 303 (450)
Q Consensus 255 gf~-----~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~-~~il~vHGGi~~~ 303 (450)
|+. +.....+.. ...+.+.+|+..+|+....+ .++++|||||+|.
T Consensus 76 g~~~~~~~d~l~~~l~a----~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~ 126 (279)
T TIGR00668 76 GISRNKPKDRLDPLLEA----PDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQ 126 (279)
T ss_pred CCCccCchHHHHHHHHc----cCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCC
Confidence 652 122222222 35677899999999976554 4699999999775
No 23
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.89 E-value=1.3e-22 Score=193.61 Aligned_cols=180 Identities=19% Similarity=0.234 Sum_probs=122.7
Q ss_pred EEEecCcCcHHHHHHHHHHhcCCC-------CCCceEEEeccccccCCchHHHHHHHHHhhhc---CCCcEEEecccccc
Q 013080 178 IVVGDILGQFHDLVALFEENAGFP-------SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVL---MPHRVYLLRGNHET 247 (450)
Q Consensus 178 ~ViGDIHG~~~dL~~il~~~~g~~-------~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~---~P~~v~lLRGNHE~ 247 (450)
+||||||||++.|.++|+ .++.. ...+.+||+||+||||+++.||+.+|+.++.. .+.++++|+||||.
T Consensus 1 ~vi~DIHG~~~~l~~ll~-~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~ 79 (208)
T cd07425 1 VAIGDLHGDLDAFREILK-GAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHEL 79 (208)
T ss_pred CEEeCccCCHHHHHHHHH-HCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcH
Confidence 589999999999999999 77752 34566999999999999999999999998754 45789999999999
Q ss_pred cccccccCchH--HHHHHhCC-cchhHHH---HHHHHHhhcCCcceeeeceEEEEecCCCCCcCCCcccccccccccccc
Q 013080 248 KNCTLAYGFWA--ELCTKFGK-KDCKLVF---DKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLD 321 (450)
Q Consensus 248 ~~~~~~ygf~~--e~~~ky~~-~~~~~l~---~~~~~~f~~LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~ 321 (450)
+.+...+.+.. +....... .....++ ..+.+|+..+|+...++ ++++||||+.+-
T Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~------------------ 140 (208)
T cd07425 80 MNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPL------------------ 140 (208)
T ss_pred HHHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHH------------------
Confidence 98874433221 11111110 0001122 34578999999987775 688899999321
Q ss_pred cCCCCChHHHhhhccccccCCCCcccccccccCCCCCCCcccccCCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCC
Q 013080 322 TLSLGSLREFAKVNRFLEDVPENDLLSDVLWSDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTG 401 (450)
Q Consensus 322 ~~~~~sl~~i~~i~R~~~~p~~~~l~~dlLWsDP~~~~g~~~n~RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~ 401 (450)
++ | ..+ .|.... .-|+..+.++++.++.++||+|||.
T Consensus 141 ----w~--------r------------~y~--~~~~~~-----------~~~~~~~~~~l~~~~~~~iv~GHTh------ 177 (208)
T cd07425 141 ----WY--------R------------GYS--KETSDK-----------ECAAAHLDKVLERLGAKRMVVGHTP------ 177 (208)
T ss_pred ----Hh--------h------------Hhh--hhhhhc-----------cchHHHHHHHHHHcCCCeEEEcCee------
Confidence 00 0 000 000000 0012467889999999999999995
Q ss_pred CCccccccCCceecccCCCCeEEEEecC
Q 013080 402 ADDARNMLNGYSKDHDTVSGELYTLFTA 429 (450)
Q Consensus 402 r~~~~~v~~Gy~~~h~~~~gk~iTVFSA 429 (450)
++.|..... +|++|+|.+.
T Consensus 178 ------~~~~~~~~~---~g~~i~ID~g 196 (208)
T cd07425 178 ------QEGGIVTFC---GGKVIRIDVG 196 (208)
T ss_pred ------eecCceEEE---CCEEEEEeCC
Confidence 344443233 5999999973
No 24
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.88 E-value=6.6e-23 Score=201.28 Aligned_cols=119 Identities=23% Similarity=0.323 Sum_probs=95.3
Q ss_pred eEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCc
Q 013080 177 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGF 256 (450)
Q Consensus 177 i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf 256 (450)
++||||||||+..|.++|+ .+++.+..+.++|+||||||||+|+||+.+|+.++ +++++++||||.+.++..+|+
T Consensus 1 ~yvIGDIHG~~~~L~~LL~-~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~ 75 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLE-KINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGI 75 (257)
T ss_pred CEEEECCCCCHHHHHHHHH-hcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCc
Confidence 5899999999999999999 88887666679999999999999999999999885 489999999999987765554
Q ss_pred hHH----HHHHhCCcchhHHHHHHHHHhhcCCcceeeec-eEEEEecCCCCC
Q 013080 257 WAE----LCTKFGKKDCKLVFDKCLECFRTLPLATIIAQ-GVYTTHGGLFRR 303 (450)
Q Consensus 257 ~~e----~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~-~il~vHGGi~~~ 303 (450)
... ....+- .....+.+.+|+..+|+...+++ ++++|||||+|.
T Consensus 76 ~~~~~~~t~~~~l---~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~ 124 (257)
T cd07422 76 KKPKKKDTLDDIL---NAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQ 124 (257)
T ss_pred cccccHhHHHHHH---hccchHHHHHHHHhCCCEEEECCccEEEEccCCCCC
Confidence 311 111110 11234568899999999887764 899999999764
No 25
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.88 E-value=6.7e-22 Score=196.01 Aligned_cols=121 Identities=23% Similarity=0.336 Sum_probs=95.7
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccccccccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 254 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~y 254 (450)
|+++||||||||+..|.++++ .+++.+..+.++|+||||||||+|.||+.+|..+ +.++++++||||.+.+...+
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~-~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~ 75 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLE-KIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAA 75 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHH-hcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhc
Confidence 478999999999999999999 8887555566999999999999999999999876 35799999999998877666
Q ss_pred CchH----HHHHHhCCcchhHHHHHHHHHhhcCCcceee-eceEEEEecCCCCC
Q 013080 255 GFWA----ELCTKFGKKDCKLVFDKCLECFRTLPLATII-AQGVYTTHGGLFRR 303 (450)
Q Consensus 255 gf~~----e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii-~~~il~vHGGi~~~ 303 (450)
|+.. .....+-. ....+.+.+|++.+|+...+ ++++++||||++|.
T Consensus 76 g~~~~~~~~~l~~~l~---~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~ 126 (275)
T PRK00166 76 GIKRNKKKDTLDPILE---APDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQ 126 (275)
T ss_pred CCccccchhHHHHHHc---cccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCC
Confidence 6431 11111111 12446688999999997775 57899999999764
No 26
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.87 E-value=1.3e-21 Score=187.71 Aligned_cols=126 Identities=21% Similarity=0.251 Sum_probs=92.6
Q ss_pred eeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccc
Q 013080 168 KLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHET 247 (450)
Q Consensus 168 ~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~ 247 (450)
.+.....++++||||||||+..|+++|+ .+++.+..+.++||||+|||||+|.|||.+|... +++.|+||||.
T Consensus 10 ~~~~~~~~ri~vigDIHG~~~~L~~lL~-~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~ 82 (218)
T PRK11439 10 RIAGHQWRHIWLVGDIHGCFEQLMRKLR-HCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQ 82 (218)
T ss_pred cccCCCCCeEEEEEcccCCHHHHHHHHH-hcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHH
Confidence 4443344699999999999999999999 8877655566999999999999999999998642 67899999999
Q ss_pred cccccccCchHHHHH--------HhCCcchhHHHHHHHHHhhcCCcceeee---ceEEEEecCCC
Q 013080 248 KNCTLAYGFWAELCT--------KFGKKDCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLF 301 (450)
Q Consensus 248 ~~~~~~ygf~~e~~~--------ky~~~~~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGi~ 301 (450)
++++...+-....+. .+... ..+.+..+.++++.||+...+. +++++||||++
T Consensus 83 ~~l~~~~~~~~~~w~~~gg~~~~~l~~~-~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 83 MALDALASQQMSLWLMNGGDWFIALTDN-QQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHHHHCCccchhhhCCChhhhhcchh-hhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 887532111101111 11111 2234566779999999987653 57999999984
No 27
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.86 E-value=2.6e-21 Score=191.46 Aligned_cols=74 Identities=31% Similarity=0.415 Sum_probs=63.0
Q ss_pred ceEEEecCcCcHHHHHHHHHHhcCC-----CCCCceEEEeccccccCCchHHHHHHHHHhhhcCCC-cEEEecccccccc
Q 013080 176 EVIVVGDILGQFHDLVALFEENAGF-----PSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPH-RVYLLRGNHETKN 249 (450)
Q Consensus 176 ~i~ViGDIHG~~~dL~~il~~~~g~-----~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~-~v~lLRGNHE~~~ 249 (450)
++++||||||+++.|..+|+ .+.. +.....+||||||||||++|.+|+.+|++++..+|. ++++|+||||.++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~-~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWL-NLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred eEEEEEeccCCHHHHHHHHH-HhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 68999999999999999998 4321 122345999999999999999999999999988876 6889999999776
Q ss_pred c
Q 013080 250 C 250 (450)
Q Consensus 250 ~ 250 (450)
+
T Consensus 82 l 82 (304)
T cd07421 82 A 82 (304)
T ss_pred H
Confidence 3
No 28
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.85 E-value=3.8e-21 Score=185.17 Aligned_cols=118 Identities=26% Similarity=0.336 Sum_probs=90.7
Q ss_pred EEEecCcCcHHHHHHHHHHhcCCC-------CCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccccccc
Q 013080 178 IVVGDILGQFHDLVALFEENAGFP-------SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNC 250 (450)
Q Consensus 178 ~ViGDIHG~~~dL~~il~~~~g~~-------~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~ 250 (450)
+||||||||++.|.++++ .+++. +..+.+|||||||||||+|.|||.+|+.++ .+.++++|+||||.+++
T Consensus 2 ~vIGDIHG~~~~L~~lL~-~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll 78 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLH-KLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAI 78 (222)
T ss_pred EEEEeccCCHHHHHHHHH-HcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHH
Confidence 699999999999999999 77664 134579999999999999999999999885 34589999999999876
Q ss_pred ccccC------------ch-----HHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCC
Q 013080 251 TLAYG------------FW-----AELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLF 301 (450)
Q Consensus 251 ~~~yg------------f~-----~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~ 301 (450)
....+ .. .+..+.++. ..+.++.+.+||+.||++... +++++||||+.
T Consensus 79 ~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 79 AWHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE--HSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred HhhhCCcccchhhhcCCCcccccHHHHHHHHhc--cchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 42211 00 122233322 134567889999999997665 68999999983
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.85 E-value=8.8e-21 Score=180.29 Aligned_cols=122 Identities=24% Similarity=0.242 Sum_probs=94.7
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccccccccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAY 254 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~y 254 (450)
++++|||||||++.+|.++++ ..++....+.++|+|||||||+++.|++.+|.. ..+++++||||.+.+....
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~-~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~ 73 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALD-AVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALR 73 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHH-HcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhh
Confidence 479999999999999999999 777755556699999999999999999998864 2689999999999877554
Q ss_pred C--chHHHHHHhCCcc-----hhHHHHHHHHHhhcCCcceeee---ceEEEEecCCCCC
Q 013080 255 G--FWAELCTKFGKKD-----CKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLFRR 303 (450)
Q Consensus 255 g--f~~e~~~ky~~~~-----~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGi~~~ 303 (450)
+ ...+.+.+.+... ...+++.+.+||+.||+...++ .++++||||+++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~ 132 (207)
T cd07424 74 AEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSD 132 (207)
T ss_pred CCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcc
Confidence 4 2233333333221 1225566888999999988775 4799999998643
No 30
>PHA02239 putative protein phosphatase
Probab=99.84 E-value=8.1e-21 Score=184.42 Aligned_cols=125 Identities=19% Similarity=0.269 Sum_probs=91.8
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCC-CCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFP-SDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLA 253 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~-~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ 253 (450)
|++++||||||++..|.++++ .+... ...+.+||+|||||||++|.+++..|+.+.. .+.++++|+||||.+++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~-~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~ 78 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMD-KINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIM 78 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHH-HHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHH
Confidence 478999999999999999999 55322 2234599999999999999999999998753 45689999999999865321
Q ss_pred c-----C---------chHHHHHHhCCcch---------------------------hHHHHHHHHHhhcCCcceeeece
Q 013080 254 Y-----G---------FWAELCTKFGKKDC---------------------------KLVFDKCLECFRTLPLATIIAQG 292 (450)
Q Consensus 254 y-----g---------f~~e~~~ky~~~~~---------------------------~~l~~~~~~~f~~LPlaaii~~~ 292 (450)
. + ...+....|+.... ...+..+..|++.||+.... ++
T Consensus 79 ~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~ 157 (235)
T PHA02239 79 ENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DK 157 (235)
T ss_pred hCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CC
Confidence 0 0 01234456643211 11345667799999997665 68
Q ss_pred EEEEecCCCC
Q 013080 293 VYTTHGGLFR 302 (450)
Q Consensus 293 il~vHGGi~~ 302 (450)
++|||||+.|
T Consensus 158 ~ifVHAGi~p 167 (235)
T PHA02239 158 YIFSHSGGVS 167 (235)
T ss_pred EEEEeCCCCC
Confidence 9999999954
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.82 E-value=4.4e-20 Score=177.31 Aligned_cols=130 Identities=21% Similarity=0.231 Sum_probs=91.4
Q ss_pred eeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccc
Q 013080 166 CVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 245 (450)
Q Consensus 166 lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNH 245 (450)
+..+.....++++||||||||+..|+++++ ...+....+.++|+|||||||++|.||+.+|.. .+++.+||||
T Consensus 6 ~~~~~~~~~~ri~visDiHg~~~~l~~~l~-~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNH 78 (218)
T PRK09968 6 YQKINAHHYRHIWVVGDIHGEYQLLQSRLH-QLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNH 78 (218)
T ss_pred eeeccCCCCCeEEEEEeccCCHHHHHHHHH-hcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECch
Confidence 334444344699999999999999999999 777655556699999999999999999998853 2688999999
Q ss_pred cccccccccCchHHHHHH------hCCc-chhHHHHHHHHHhhcCCcceeee---ceEEEEecCCCC
Q 013080 246 ETKNCTLAYGFWAELCTK------FGKK-DCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLFR 302 (450)
Q Consensus 246 E~~~~~~~ygf~~e~~~k------y~~~-~~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGi~~ 302 (450)
|.+++....+-....+.. +... ...........++..||+...+. .++++||||++.
T Consensus 79 E~~~~~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~ 145 (218)
T PRK09968 79 EAMALDAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPG 145 (218)
T ss_pred HHHHHHHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCC
Confidence 998865321100001111 1110 01123344567899999987664 468999999843
No 32
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=99.69 E-value=8.8e-17 Score=134.79 Aligned_cols=93 Identities=20% Similarity=0.369 Sum_probs=68.8
Q ss_pred HHHHhhhhhhhhhchhhhhhhhhhhhhhcccchhhhccCCCccCcccCC--CCCCCCCCCCCCCCHHHHHHHHHHhhhcC
Q 013080 56 LRSACNIVSKQRVFDSSLQGLLEELQVEVGSTMRERLVGGKLENLTKEQ--DTLPLSWPRNGRISLEWIQLLISTFKWSS 133 (450)
Q Consensus 56 ~~~~c~~~~~~~~fe~ai~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~~~~p~~~~~t~~~i~~l~~~~~~~~ 133 (450)
|+.+|.|++||++||+||++ |+.+.++.+++ ++++|.+++ +||++ +++.+|.+||.+|+++|+.++
T Consensus 1 Kl~ec~k~ir~~~FekAI~~--d~~~~s~~e~~-------d~~~i~Ve~sY~GP~l---~~~~it~efv~~mie~FK~~K 68 (95)
T PF08321_consen 1 KLKECEKLIRRIAFEKAIAV--DEEKKSVSESI-------DLESIDVEDSYDGPRL---EDEPITLEFVKAMIEWFKNQK 68 (95)
T ss_dssp HHHHHHHHHHHHHHSHHHHH--HHHHHSTTTS--------TTSTT---SS--SS-----BTTB--HHHHHHHHHHHHCT-
T ss_pred CHHHHHHHHHHHHHHHHhcc--CCcccCHHHhc-------CccceecCCCCCCCCC---CCCCCCHHHHHHHHHHHHhCC
Confidence 68999999999999999999 33344454444 888888887 69999 455699999999999999765
Q ss_pred CCCccccccCCCHHHHHHHHHHHHHHHHhCCCeeee
Q 013080 134 WKDPKEFRNVMPVTVVKKLISAASKIMREERNCVKL 169 (450)
Q Consensus 134 ~~~~~~~~~~l~~~~~~~Ll~~a~~il~~ep~lv~i 169 (450)
.||..++.+|+.++.++|+++|++++|
T Consensus 69 ---------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 69 ---------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp ------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred ---------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 689999999999999999999999986
No 33
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.23 E-value=5.6e-11 Score=103.34 Aligned_cols=76 Identities=22% Similarity=0.335 Sum_probs=56.5
Q ss_pred ceEEEecCcCcHHHH---HHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHH--HHhhhcCCCcEEEeccccccccc
Q 013080 176 EVIVVGDILGQFHDL---VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVL--LAWKVLMPHRVYLLRGNHETKNC 250 (450)
Q Consensus 176 ~i~ViGDIHG~~~dL---~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL--~~Lk~~~P~~v~lLRGNHE~~~~ 250 (450)
+|+++||+|+..... ...+...... ...+.+|++||++|+|..+.+..... .......+..+++++||||....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~-~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAE-NKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHH-TTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhcc-CCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 789999999999987 3333312222 33445999999999999998877765 45555677899999999999875
Q ss_pred cc
Q 013080 251 TL 252 (450)
Q Consensus 251 ~~ 252 (450)
..
T Consensus 81 ~~ 82 (200)
T PF00149_consen 81 NS 82 (200)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 34
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.17 E-value=1.2e-12 Score=135.69 Aligned_cols=288 Identities=17% Similarity=0.019 Sum_probs=206.8
Q ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCch
Q 013080 141 RNVMPVTVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG 220 (450)
Q Consensus 141 ~~~l~~~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~s 220 (450)
.+.|..+++..++.-+.+.+..+||+..+......-.+.++|.||++.|+.+.++ .. |.....|++-|++++++.+.
T Consensus 12 n~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie-~d--P~~~K~Y~rrg~a~m~l~~~ 88 (476)
T KOG0376|consen 12 NEALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIE-LD--PTYIKAYVRRGTAVMALGEF 88 (476)
T ss_pred hhhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhh-cC--chhhheeeeccHHHHhHHHH
Confidence 3456778888999999999999999999875333457899999999999999998 33 76677799999999999999
Q ss_pred HHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCC
Q 013080 221 LEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGL 300 (450)
Q Consensus 221 lEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi 300 (450)
.+.+..+...+...|+...+.|++||+..+...++|..++...++.. +..++..+...+.. |++..+.+.++=-| -+
T Consensus 89 ~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~-~s~~~~~~~~~~~~-~i~~~y~g~~le~~-kv 165 (476)
T KOG0376|consen 89 KKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDK-KSVVEMKIDEEDMD-LIESDYSGPVLEDH-KV 165 (476)
T ss_pred HHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCC-cccccccccccccc-ccccccCCcccccc-hh
Confidence 99999999999999999999999999999999999999888777654 22333323222221 14344433332222 11
Q ss_pred CCCcCCCcccccccccccccccCCCCChHHHhhhccccccCC-CCcccccccccCCCCCCCccccc-CCCeeeeChhhHH
Q 013080 301 FRRTCSASTQCSTGEKRQKLDTLSLGSLREFAKVNRFLEDVP-ENDLLSDVLWSDPSSEAGLRENT-KKFGLLWGPDCTE 378 (450)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~p~-~~~l~~dlLWsDP~~~~g~~~n~-RG~g~~fG~d~~~ 378 (450)
.... + .......+...........++.+.....+..+++. +-..-.+..|++|....|...+. ++.+..++|+.+.
T Consensus 166 t~e~-v-k~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~ 243 (476)
T KOG0376|consen 166 TLEF-V-KTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETN 243 (476)
T ss_pred hHHH-H-HHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcc
Confidence 0000 0 00000000000011112233333322222222222 22256788999999888776666 9999999999999
Q ss_pred HHHHhcCceEEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEEecCCCccccc
Q 013080 379 EFLKENHLKLIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTLFTAPNYPQVQ 436 (450)
Q Consensus 379 ~FL~~n~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~~~ 436 (450)
.||...+...+++.|..++.+..+-++..+..+|...|+..++.++++|+++.++...
T Consensus 244 ~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~k 301 (476)
T KOG0376|consen 244 PYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAK 301 (476)
T ss_pred cccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhh
Confidence 9999999999999999988888899988899999998887788999999999988653
No 35
>PRK09453 phosphodiesterase; Provisional
Probab=98.90 E-value=4.9e-09 Score=97.59 Aligned_cols=69 Identities=17% Similarity=0.275 Sum_probs=52.9
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCc--------hHHHHHHHHHhhhcCCCcEEEeccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW--------GLEVLLVLLAWKVLMPHRVYLLRGNHE 246 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~--------slEvl~lL~~Lk~~~P~~v~lLRGNHE 246 (450)
|++.|++|+||++..+.++++ .+..... +.++++||++|+|+. +.+++..|..+ ...+++++||||
T Consensus 1 mri~viSD~Hg~~~~~~~~l~-~~~~~~~-d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD 74 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALE-LFAQSGA-DWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCD 74 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHH-HHHhcCC-CEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCc
Confidence 579999999999999999888 6543333 449999999999873 45666666433 246999999999
Q ss_pred ccc
Q 013080 247 TKN 249 (450)
Q Consensus 247 ~~~ 249 (450)
...
T Consensus 75 ~~~ 77 (182)
T PRK09453 75 SEV 77 (182)
T ss_pred chh
Confidence 743
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.79 E-value=5.2e-08 Score=88.52 Aligned_cols=64 Identities=19% Similarity=0.265 Sum_probs=48.1
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 248 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~ 248 (450)
+++.|++|+||++..+..+++ ........+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~-~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVE-LFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHH-HHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 579999999999988777766 554442345599999999 457777765442 2599999999973
No 37
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.76 E-value=2.8e-08 Score=89.45 Aligned_cols=60 Identities=20% Similarity=0.241 Sum_probs=47.8
Q ss_pred ceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccc
Q 013080 176 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 176 ~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
++.+++|+||+...+.++++ .... .+.++++||++++|..+. + .....++.++||||...
T Consensus 1 ~i~~isD~H~~~~~~~~~~~-~~~~---~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~ 60 (155)
T cd00841 1 KIGVISDTHGSLELLEKALE-LFGD---VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEV 60 (155)
T ss_pred CEEEEecCCCCHHHHHHHHH-HhcC---CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcC
Confidence 47899999999999999998 5543 345999999999998765 1 22346999999999754
No 38
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.69 E-value=5.9e-08 Score=86.52 Aligned_cols=61 Identities=30% Similarity=0.522 Sum_probs=44.7
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
|+|.++||+|++...+.++++ .+. +.+.++++||++|+ .+++..+..+ .++.++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~-~~~---~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLE-YIN---EPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHH-HHT---TESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHH-Hhc---CCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 579999999999999999999 662 24459999999994 6777776544 6999999999654
No 39
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.66 E-value=4.1e-08 Score=85.59 Aligned_cols=146 Identities=31% Similarity=0.395 Sum_probs=109.0
Q ss_pred cccccCchHHHHHHhCCcchhHHHHH---HHHHhhcCCcceeeec-eEEEEecCCCCCcCCCcccccccccccccccCCC
Q 013080 250 CTLAYGFWAELCTKFGKKDCKLVFDK---CLECFRTLPLATIIAQ-GVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSL 325 (450)
Q Consensus 250 ~~~~ygf~~e~~~ky~~~~~~~l~~~---~~~~f~~LPlaaii~~-~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (450)
+...+|+..++...++.. ..|.. +.++|+.+|+.++++. .++|.|||+++.. .
T Consensus 3 l~~~~~~~~~~~~~~~~~---~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~--------------------~ 59 (155)
T COG0639 3 LTALYGFYDEKLRKYGEE---LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGL--------------------D 59 (155)
T ss_pred hhhhhchhHHhhhhcCCc---eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcch--------------------h
Confidence 345577777777776642 23444 8999999999999988 8999999997642 1
Q ss_pred CChHHHhhhccccc-cCCCCcccccccccCCCC--CCCcccccCCCeeeeChhhHHHHHHhcCceEEEeecCCCCCCCCC
Q 013080 326 GSLREFAKVNRFLE-DVPENDLLSDVLWSDPSS--EAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHEGPDARTGA 402 (450)
Q Consensus 326 ~sl~~i~~i~R~~~-~p~~~~l~~dlLWsDP~~--~~g~~~n~RG~g~~fG~d~~~~FL~~n~l~~IIRgHe~~~~~~~r 402 (450)
..++++..+.|... .....+.+.+.+|++|.. ...|.++.+|.+..+ ++.+..|+..+..+.+.++|+.
T Consensus 60 ~~~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~------- 131 (155)
T COG0639 60 RLLDIIEVLDRLRACEVPHAGHTHDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVL------- 131 (155)
T ss_pred hhHHHHHHHhhhhcccCCCccccccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEE-------
Confidence 45666666666541 223445566669999986 578889999998877 8899999988888889999995
Q ss_pred CccccccCCceecccCCCCeEEEEecCCCccc
Q 013080 403 DDARNMLNGYSKDHDTVSGELYTLFTAPNYPQ 434 (450)
Q Consensus 403 ~~~~~v~~Gy~~~h~~~~gk~iTVFSA~nY~~ 434 (450)
+..++...+ .+..+|.|++++|+.
T Consensus 132 -----~~~d~~~~~---~~~~lt~~~~~~~~~ 155 (155)
T COG0639 132 -----YDIDTGAVF---GGGLLTAFSAPNYCY 155 (155)
T ss_pred -----EecCceEEe---CCCeeeEEecccccC
Confidence 456676655 129999999999873
No 40
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.54 E-value=1.1e-06 Score=85.61 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=73.3
Q ss_pred ceEEEecCcCcHHHHH-HHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccc-
Q 013080 176 EVIVVGDILGQFHDLV-ALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLA- 253 (450)
Q Consensus 176 ~i~ViGDIHG~~~dL~-~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~- 253 (450)
+|.++|||||++.... ..++ .. . .+.+|++||+++. +.+++..|..+ |..++.++||||.......
T Consensus 2 rIa~isDiHg~~~~~~~~~l~-~~---~-pD~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~ 69 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALH-LL---Q-PDLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYDATFR 69 (238)
T ss_pred EEEEEecCCCCchHHHHHHHh-cc---C-CCEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCccccccccc
Confidence 6899999999987643 2333 22 1 2459999999864 56777766544 3358999999998552100
Q ss_pred --c---------------------------------C--------ch-HHHHHHhCCcchhHHHHHHHHHhhcCCcceee
Q 013080 254 --Y---------------------------------G--------FW-AELCTKFGKKDCKLVFDKCLECFRTLPLATII 289 (450)
Q Consensus 254 --y---------------------------------g--------f~-~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii 289 (450)
+ + +. .++...|+.. ...+.+..+++.++.+...
T Consensus 70 ~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~---s~~eA~~~ive~~~~~~~~ 146 (238)
T cd07397 70 KKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVI---SLEESAQRIIAAAKKAPPD 146 (238)
T ss_pred chHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCC---CHHHHHHHHHHHhhhcCCC
Confidence 0 0 11 2466667633 4667777888888643433
Q ss_pred eceEEEEecCCC
Q 013080 290 AQGVYTTHGGLF 301 (450)
Q Consensus 290 ~~~il~vHGGi~ 301 (450)
...||+.|+++.
T Consensus 147 ~~~VliaH~~~~ 158 (238)
T cd07397 147 LPLILLAHNGPS 158 (238)
T ss_pred CCeEEEeCcCCc
Confidence 458999999984
No 41
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.49 E-value=1.8e-06 Score=76.30 Aligned_cols=61 Identities=18% Similarity=0.392 Sum_probs=40.4
Q ss_pred ceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchH--HHHHHHHHhhhcCCCcEEEeccccccc
Q 013080 176 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVLLVLLAWKVLMPHRVYLLRGNHETK 248 (450)
Q Consensus 176 ~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl--Evl~lL~~Lk~~~P~~v~lLRGNHE~~ 248 (450)
++.++||+||++. .+. .. +.+.+|++||++++|..+- +.+.++..++ .| .++++.||||..
T Consensus 1 ~i~~isD~H~~~~----~~~----~~-~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~ 63 (135)
T cd07379 1 RFVCISDTHSRHR----TIS----IP-DGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLT 63 (135)
T ss_pred CEEEEeCCCCCCC----cCc----CC-CCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCc
Confidence 4789999999977 122 12 2345999999999986542 2344443331 22 367899999964
No 42
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.44 E-value=1.6e-06 Score=73.33 Aligned_cols=67 Identities=31% Similarity=0.454 Sum_probs=49.4
Q ss_pred EEEecCcCcHHHHHHHH--HHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccc
Q 013080 178 IVVGDILGQFHDLVALF--EENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 246 (450)
Q Consensus 178 ~ViGDIHG~~~dL~~il--~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE 246 (450)
+++||+|+......... . .... ...+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~-~~~~-~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAA-LAAA-EKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHH-Hhcc-cCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 37899999999887765 2 2222 233459999999999998887766533334456678999999999
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.36 E-value=5.3e-06 Score=76.18 Aligned_cols=65 Identities=20% Similarity=0.245 Sum_probs=44.8
Q ss_pred eEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCch-HHHHHHHHHhhhcCCCcEEEecccccccc
Q 013080 177 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-LEVLLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 177 i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~s-lEvl~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
|.++||+||++..+.. . ...... .+.+|+.||++++|... .+.+..|. ..+..++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~-~~~~~~-~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--I-ILKAEE-ADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--H-HhhccC-CCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 5789999999998876 2 222222 34599999999999763 33333332 23446999999999743
No 44
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.32 E-value=1.4e-06 Score=84.44 Aligned_cols=71 Identities=14% Similarity=0.130 Sum_probs=55.4
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 248 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~ 248 (450)
++|.+++||||++..|.++++ .+.....+ .+|++||++++|+..-++..++-.+... +..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~-~~~~~~~D-~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVG-LAPETGAD-AIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHH-HHhhcCCC-EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 689999999999999999998 55333334 4999999999997666666666555432 33689999999974
No 45
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=97.94 E-value=3.2e-05 Score=75.28 Aligned_cols=70 Identities=11% Similarity=0.200 Sum_probs=47.0
Q ss_pred CceEEEecCcCcH------HHHHHHHHHhcCCCCCCceEEEecccccc-------CCchHHHHHHHHHhhhcCCCcEEEe
Q 013080 175 SEVIVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDK-------GSWGLEVLLVLLAWKVLMPHRVYLL 241 (450)
Q Consensus 175 ~~i~ViGDIHG~~------~dL~~il~~~~g~~~~~~~~vFLGDyVDR-------G~~slEvl~lL~~Lk~~~P~~v~lL 241 (450)
|++++++|+|... ..+.+.++ ... ...+.++++||++|. .+...+++.+|..++. .+-.++++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~-~~~--~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v 76 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLR-GEA--RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFM 76 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHH-hhh--ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEE
Confidence 5789999999542 24555554 221 223459999999985 2334567777776653 23479999
Q ss_pred ccccccc
Q 013080 242 RGNHETK 248 (450)
Q Consensus 242 RGNHE~~ 248 (450)
+||||..
T Consensus 77 ~GNHD~~ 83 (241)
T PRK05340 77 HGNRDFL 83 (241)
T ss_pred eCCCchh
Confidence 9999964
No 46
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=97.90 E-value=4.1e-05 Score=71.47 Aligned_cols=59 Identities=22% Similarity=0.320 Sum_probs=41.1
Q ss_pred ceEEEecCc-CcHH-----HHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccccc
Q 013080 176 EVIVVGDIL-GQFH-----DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 248 (450)
Q Consensus 176 ~i~ViGDIH-G~~~-----dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~ 248 (450)
+|.||+|+| |.-. .+.++++ . . .-+.++.+||+++ .+++.++..+. + .++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~-~---~-~~d~iih~GDi~~-----~~~~~~l~~~~---~-~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLV-P---G-KIQHVLCTGNLCS-----KETYDYLKTIA---P-DVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhc-c---C-CCCEEEECCCCCC-----HHHHHHHHhhC---C-ceEEEECCCCcc
Confidence 478999999 6533 3555555 2 2 2345999999987 67777665442 2 589999999963
No 47
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=97.87 E-value=8.8e-05 Score=73.66 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=48.7
Q ss_pred CCceEEEecCcCc----HHHHHHHHHHhcCCCCCCceEEEeccccccC--CchHHHHHHHHHhhhcCCCcEEEecccccc
Q 013080 174 DSEVIVVGDILGQ----FHDLVALFEENAGFPSDHRYFVFNGNYVDKG--SWGLEVLLVLLAWKVLMPHRVYLLRGNHET 247 (450)
Q Consensus 174 ~~~i~ViGDIHG~----~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG--~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~ 247 (450)
+.+|.+++|+|.. ...+.++++ ....... +.+++.||++|.+ ....++...|..|+... .++.+.||||.
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~-~i~~~~p-DlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~ 124 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIA-LGIEQKP-DLILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDR 124 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHH-HHHhcCC-CEEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCc
Confidence 4689999999976 455677776 4333333 3499999999954 22234555666665433 49999999996
Q ss_pred c
Q 013080 248 K 248 (450)
Q Consensus 248 ~ 248 (450)
.
T Consensus 125 ~ 125 (271)
T PRK11340 125 P 125 (271)
T ss_pred c
Confidence 4
No 48
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=97.86 E-value=1.3e-05 Score=73.00 Aligned_cols=68 Identities=24% Similarity=0.158 Sum_probs=46.8
Q ss_pred eEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccccc
Q 013080 177 VIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 248 (450)
Q Consensus 177 i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~ 248 (450)
+.+++|||+....+...+.+..... +.+.++++||+++++..+..+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~-~~d~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAP-DADILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCC-CCCEEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 4689999999887766552022223 3445999999999987765554 2222 23455799999999986
No 49
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.85 E-value=0.00018 Score=63.81 Aligned_cols=68 Identities=19% Similarity=0.210 Sum_probs=39.1
Q ss_pred eEEEecCcCcHH----------HHHHHHHHhcCCCCCCceEEEeccccccCCch-HH-HHHHHHHhhhcCCCcEEEeccc
Q 013080 177 VIVVGDILGQFH----------DLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-LE-VLLVLLAWKVLMPHRVYLLRGN 244 (450)
Q Consensus 177 i~ViGDIHG~~~----------dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~s-lE-vl~lL~~Lk~~~P~~v~lLRGN 244 (450)
|+.++|+|=... .|.++++ .......+ .++++||+++.|... .+ ...++-.++... ..+++++||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~-~~~~~~~d-~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GN 77 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLA-EIKALDPD-LVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGN 77 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHH-HHhccCCC-EEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCC
Confidence 467889982111 1222344 33333334 499999999998752 22 223333333211 379999999
Q ss_pred ccc
Q 013080 245 HET 247 (450)
Q Consensus 245 HE~ 247 (450)
||.
T Consensus 78 HD~ 80 (144)
T cd07400 78 HDV 80 (144)
T ss_pred CeE
Confidence 996
No 50
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.84 E-value=0.00013 Score=64.35 Aligned_cols=55 Identities=20% Similarity=0.234 Sum_probs=38.4
Q ss_pred EEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccc
Q 013080 179 VVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 246 (450)
Q Consensus 179 ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE 246 (450)
|++|+||..+.+.++.. . .... +.++++||+. .+++..+..+ ....++.++||||
T Consensus 2 viSDtH~~~~~~~~~~~-~--~~~~-d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D 56 (129)
T cd07403 2 VISDTESPALYSPEIKV-R--LEGV-DLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD 56 (129)
T ss_pred eeccccCccccchHHHh-h--CCCC-CEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc
Confidence 89999999887777666 3 2233 4499999984 3445555544 1235889999999
No 51
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.81 E-value=3.5e-05 Score=73.24 Aligned_cols=71 Identities=25% Similarity=0.251 Sum_probs=49.6
Q ss_pred CceEEEecCcCcHH----HHHHHHHHhcCCCCCCceEEEeccccccCCchH-HHHHHHHHhhhcCCCcEEEecccccccc
Q 013080 175 SEVIVVGDILGQFH----DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-EVLLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 175 ~~i~ViGDIHG~~~----dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl-Evl~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
.++.+++|+|+... .+.++++ .+..... +.+++.||++|.+.... +...++..+. .+..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~-~~~~~~~-d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVE-KINALKP-DLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHH-HHhccCC-CEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 57999999998743 5666666 4333233 34999999999988775 4444444332 3456999999999754
No 52
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.79 E-value=0.0013 Score=63.04 Aligned_cols=69 Identities=20% Similarity=0.172 Sum_probs=39.6
Q ss_pred ceEEEecCcCcH----HHHHH----HHHHhcCCCCCCceEEEeccccccCCchH--HHHH-HHHHhhhcCCCcEEEeccc
Q 013080 176 EVIVVGDILGQF----HDLVA----LFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVLL-VLLAWKVLMPHRVYLLRGN 244 (450)
Q Consensus 176 ~i~ViGDIHG~~----~dL~~----il~~~~g~~~~~~~~vFLGDyVDRG~~sl--Evl~-lL~~Lk~~~P~~v~lLRGN 244 (450)
++.++||+|-.. ..+.. +.+ .+..... +.+|++||++|.|.... +.+. .+-.|. ..+--++.++||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~-~~~~~~~-d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GN 78 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVD-NAEALNI-AFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGN 78 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHH-HHHHcCC-CEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCC
Confidence 578999999522 22322 333 2222222 34999999999998432 2222 222222 122348899999
Q ss_pred ccc
Q 013080 245 HET 247 (450)
Q Consensus 245 HE~ 247 (450)
||.
T Consensus 79 HD~ 81 (214)
T cd07399 79 HDL 81 (214)
T ss_pred Ccc
Confidence 994
No 53
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.54 E-value=0.00027 Score=65.25 Aligned_cols=45 Identities=20% Similarity=0.122 Sum_probs=27.6
Q ss_pred ceEEEeccccccCCch--HHHHHHHHHhhhcCCCcEEEecccccccc
Q 013080 205 RYFVFNGNYVDKGSWG--LEVLLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 205 ~~~vFLGDyVDRG~~s--lEvl~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
+.+|++||++|..... .+....-+......+-.+++++||||...
T Consensus 43 d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 43 ERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred CEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 3499999999865432 22222101112234558999999999754
No 54
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.54 E-value=0.00079 Score=62.73 Aligned_cols=65 Identities=11% Similarity=0.191 Sum_probs=44.2
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
++|.|++|+||...+..+..+ ....... +.+|.+||++..+... . +......+++.++||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~-~~~~~~~-d~vih~GD~~~~~~~~-----~---l~~~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALK-IFNLEKV-DAVIHAGDSTSPFTLD-----A---LEGGLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHH-HhhhcCC-CEEEECCCcCCccchH-----H---hhcccccceEEEEccCCCcc
Confidence 689999999999975454544 3333333 4499999999765532 1 11102468999999999754
No 55
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.50 E-value=0.00029 Score=64.79 Aligned_cols=68 Identities=21% Similarity=0.232 Sum_probs=42.7
Q ss_pred eEEEecCcCcHHHH---------------HHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEe
Q 013080 177 VIVVGDILGQFHDL---------------VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLL 241 (450)
Q Consensus 177 i~ViGDIHG~~~dL---------------~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lL 241 (450)
+++++|+|=..... ..+++.........+.+|++||++++|..+.. +.++.. .+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEE
Confidence 37889998444432 22333222222234559999999999987644 333333 34569999
Q ss_pred cccccccc
Q 013080 242 RGNHETKN 249 (450)
Q Consensus 242 RGNHE~~~ 249 (450)
+||||...
T Consensus 76 ~GNHD~~~ 83 (168)
T cd07390 76 KGNHDSSL 83 (168)
T ss_pred eCCCCchh
Confidence 99999754
No 56
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.49 E-value=0.00041 Score=67.11 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=42.2
Q ss_pred eEEEecCcCcH------HHHHHHHHHhcCCCCCCceEEEeccccccC--C---c--hHHHHHHHHHhhhcCCCcEEEecc
Q 013080 177 VIVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDKG--S---W--GLEVLLVLLAWKVLMPHRVYLLRG 243 (450)
Q Consensus 177 i~ViGDIHG~~------~dL~~il~~~~g~~~~~~~~vFLGDyVDRG--~---~--slEvl~lL~~Lk~~~P~~v~lLRG 243 (450)
+++++|+|... ..+.+.+.+... ..+.++++||++|.. . . ..++...|..|+. .+..++++.|
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~---~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~G 76 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR---KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHG 76 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc---cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcC
Confidence 36899999542 234444541222 334599999999952 1 1 1345555555543 2457999999
Q ss_pred ccccc
Q 013080 244 NHETK 248 (450)
Q Consensus 244 NHE~~ 248 (450)
|||..
T Consensus 77 NHD~~ 81 (231)
T TIGR01854 77 NRDFL 81 (231)
T ss_pred CCchh
Confidence 99964
No 57
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.48 E-value=0.00023 Score=69.04 Aligned_cols=68 Identities=15% Similarity=0.102 Sum_probs=46.5
Q ss_pred ceEEEecCcCcH------HHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccccc
Q 013080 176 EVIVVGDILGQF------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 248 (450)
Q Consensus 176 ~i~ViGDIHG~~------~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~ 248 (450)
+|.+++|+|+++ ..|.++++ .+.... -+.+|+.||++++++.+.+.+..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~-~~~~~~-~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQ-YLKKQK-IDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHH-HHHhcC-CCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999653 22455555 443333 344999999999876666666555442 334699999999964
No 58
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.44 E-value=0.00039 Score=68.97 Aligned_cols=72 Identities=15% Similarity=0.242 Sum_probs=43.8
Q ss_pred eEEEecCcCcHHHHHHHHHHhcC-CCCCCceEEEeccccccCCc-hHHHHH------HHHHh------hhcCCCcEEEec
Q 013080 177 VIVVGDILGQFHDLVALFEENAG-FPSDHRYFVFNGNYVDKGSW-GLEVLL------VLLAW------KVLMPHRVYLLR 242 (450)
Q Consensus 177 i~ViGDIHG~~~dL~~il~~~~g-~~~~~~~~vFLGDyVDRG~~-slEvl~------lL~~L------k~~~P~~v~lLR 242 (450)
|+|+||+||+++.+...++.... .....+.+|+.||+-..+.. ..+.+. -+..+ ....|--++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 58999999999998775441111 11234459999999654433 333321 11111 223566689999
Q ss_pred cccccc
Q 013080 243 GNHETK 248 (450)
Q Consensus 243 GNHE~~ 248 (450)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999964
No 59
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.36 E-value=0.00034 Score=71.83 Aligned_cols=73 Identities=15% Similarity=0.200 Sum_probs=46.9
Q ss_pred CceEEEecCc-C-----------cHHHHHHHHHHhcCCCCCCceEEEeccccccC-CchHHHHHHHHH--hhh--cCCCc
Q 013080 175 SEVIVVGDIL-G-----------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLA--WKV--LMPHR 237 (450)
Q Consensus 175 ~~i~ViGDIH-G-----------~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG-~~slEvl~lL~~--Lk~--~~P~~ 237 (450)
++++.++|+| | +...|.++++ .+..... +.+|+.||++|+. +.+.+++.++.. ++. ..+-.
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~-~a~~~~v-D~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIE-YSKAHGI-TTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHH-HHHHcCC-CEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 5789999999 4 2344555555 4433333 4499999999985 455555544433 221 23457
Q ss_pred EEEecccccccc
Q 013080 238 VYLLRGNHETKN 249 (450)
Q Consensus 238 v~lLRGNHE~~~ 249 (450)
|+++.||||...
T Consensus 79 v~~I~GNHD~~~ 90 (340)
T PHA02546 79 LHVLVGNHDMYY 90 (340)
T ss_pred EEEEccCCCccc
Confidence 999999999743
No 60
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.34 E-value=0.0004 Score=65.58 Aligned_cols=73 Identities=19% Similarity=0.271 Sum_probs=46.3
Q ss_pred ceEEEecCc-CcH--------------HHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHh-hhc--CCCc
Q 013080 176 EVIVVGDIL-GQF--------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW-KVL--MPHR 237 (450)
Q Consensus 176 ~i~ViGDIH-G~~--------------~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~L-k~~--~P~~ 237 (450)
+++.++|+| |.. ..|.++++ .+.....+ .+|+.||++|.+..+.+.+..+... +.. ..-.
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d-~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVE-LAIEEKVD-FVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIP 78 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHH-HHHhcCCC-EEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCC
Confidence 478899999 322 23555555 44333333 4999999999887655544433322 211 1446
Q ss_pred EEEeccccccccc
Q 013080 238 VYLLRGNHETKNC 250 (450)
Q Consensus 238 v~lLRGNHE~~~~ 250 (450)
++++.||||....
T Consensus 79 v~~~~GNHD~~~~ 91 (223)
T cd00840 79 VFIIAGNHDSPSR 91 (223)
T ss_pred EEEecCCCCCccc
Confidence 9999999997664
No 61
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.30 E-value=0.00066 Score=67.07 Aligned_cols=72 Identities=24% Similarity=0.209 Sum_probs=45.0
Q ss_pred ceEEEecCc-C------------cHHHHHHHHHHhcCCCCCCceEEEeccccccCCc-hHHHHHHHHHhhhcCCCcEEEe
Q 013080 176 EVIVVGDIL-G------------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSW-GLEVLLVLLAWKVLMPHRVYLL 241 (450)
Q Consensus 176 ~i~ViGDIH-G------------~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~-slEvl~lL~~Lk~~~P~~v~lL 241 (450)
++.+++|+| + ....|.++++ .+.....+ -+|++||+++.|.. +.+-+..+...-...+-.++.+
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~-~i~~~~~d-~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v 79 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVE-EWNRESLD-FVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHV 79 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHH-HHHcCCCC-EEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEe
Confidence 578999999 2 2355666666 33222233 49999999999873 2233333332222223469999
Q ss_pred cccccccc
Q 013080 242 RGNHETKN 249 (450)
Q Consensus 242 RGNHE~~~ 249 (450)
.||||...
T Consensus 80 ~GNHD~~~ 87 (267)
T cd07396 80 LGNHDLYN 87 (267)
T ss_pred cCcccccc
Confidence 99999864
No 62
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.12 E-value=0.035 Score=54.31 Aligned_cols=74 Identities=14% Similarity=0.035 Sum_probs=43.4
Q ss_pred CceEEEecCcCcH----------------HHHHHHHHHhcCCCCCCceEEEeccccccCCchH---HHHHHH-HHhhhc-
Q 013080 175 SEVIVVGDILGQF----------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL---EVLLVL-LAWKVL- 233 (450)
Q Consensus 175 ~~i~ViGDIHG~~----------------~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl---Evl~lL-~~Lk~~- 233 (450)
-++++++|+|-.. ..|..+++......+..+.+|++||+++.|...- +....+ -.++..
T Consensus 5 ~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T cd07395 5 FYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD 84 (262)
T ss_pred EEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc
Confidence 3578888988553 2345555522233233445999999999987541 112222 222221
Q ss_pred CCCcEEEeccccccc
Q 013080 234 MPHRVYLLRGNHETK 248 (450)
Q Consensus 234 ~P~~v~lLRGNHE~~ 248 (450)
.+-.++.+.||||..
T Consensus 85 ~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 PDIPLVCVCGNHDVG 99 (262)
T ss_pred CCCcEEEeCCCCCCC
Confidence 134599999999974
No 63
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.10 E-value=0.0016 Score=64.60 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=45.5
Q ss_pred CceEEEecCc-C-----------cHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEec
Q 013080 175 SEVIVVGDIL-G-----------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLR 242 (450)
Q Consensus 175 ~~i~ViGDIH-G-----------~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLR 242 (450)
.+++.++|+| . ....|.++++........-+-+|+.||++|.|.. +-+..+...-...+..++.+.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~--~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSS--EAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCH--HHHHHHHHHHhhcCCcEEEeC
Confidence 6799999999 1 2456777776222333333449999999998852 233333222222345699999
Q ss_pred ccccc
Q 013080 243 GNHET 247 (450)
Q Consensus 243 GNHE~ 247 (450)
||||.
T Consensus 93 GNHD~ 97 (275)
T PRK11148 93 GNHDF 97 (275)
T ss_pred CCCCC
Confidence 99997
No 64
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.09 E-value=0.0012 Score=65.06 Aligned_cols=73 Identities=18% Similarity=0.186 Sum_probs=46.9
Q ss_pred CceEEEecCc-Cc-----------HHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHH----HHHHHhhhcCCCcE
Q 013080 175 SEVIVVGDIL-GQ-----------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL----LVLLAWKVLMPHRV 238 (450)
Q Consensus 175 ~~i~ViGDIH-G~-----------~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl----~lL~~Lk~~~P~~v 238 (450)
++++.++|+| |. ...|..+++ .+.... .+.+|+.||++|+..-+.+.. .++..|+...|-.+
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~-~~~~~~-~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v 78 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLE-FAKAEQ-IDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPI 78 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHH-HHHHcC-CCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceE
Confidence 4789999999 32 233445554 333223 344999999999986665443 23344443333579
Q ss_pred EEecccccccc
Q 013080 239 YLLRGNHETKN 249 (450)
Q Consensus 239 ~lLRGNHE~~~ 249 (450)
+++.||||...
T Consensus 79 ~~i~GNHD~~~ 89 (253)
T TIGR00619 79 VVISGNHDSAQ 89 (253)
T ss_pred EEEccCCCChh
Confidence 99999999853
No 65
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.09 E-value=0.002 Score=61.82 Aligned_cols=71 Identities=23% Similarity=0.307 Sum_probs=43.8
Q ss_pred ceEEEecCcCc------------HHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecc
Q 013080 176 EVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRG 243 (450)
Q Consensus 176 ~i~ViGDIHG~------------~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRG 243 (450)
++.+++|+|=. ...|.++++......+..+-+|++||+++.|... ....+.......+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCC
Confidence 57899999933 3456777762233323334599999999987632 122222221122446899999
Q ss_pred ccccc
Q 013080 244 NHETK 248 (450)
Q Consensus 244 NHE~~ 248 (450)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99973
No 66
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.06 E-value=0.0015 Score=61.70 Aligned_cols=23 Identities=9% Similarity=0.131 Sum_probs=18.8
Q ss_pred ChhhHHHHHHhcCceEEEeecCC
Q 013080 373 GPDCTEEFLKENHLKLIIRSHEG 395 (450)
Q Consensus 373 G~d~~~~FL~~n~l~~IIRgHe~ 395 (450)
.+..+.+.++..+.+.+|.||+-
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H 199 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTH 199 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCC
Confidence 45567777889999999999983
No 67
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.06 E-value=0.0021 Score=69.50 Aligned_cols=75 Identities=19% Similarity=0.288 Sum_probs=45.0
Q ss_pred CCCceEEEecCc-CcH----HHHHHHHHHhcCCC-------CCCceEEEecccccc-CCch---------------HHHH
Q 013080 173 EDSEVIVVGDIL-GQF----HDLVALFEENAGFP-------SDHRYFVFNGNYVDK-GSWG---------------LEVL 224 (450)
Q Consensus 173 ~~~~i~ViGDIH-G~~----~dL~~il~~~~g~~-------~~~~~~vFLGDyVDR-G~~s---------------lEvl 224 (450)
.+..+.+++|+| |.- ..+..+++...|.. ..-..+|++||++|. |.+. -++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 346799999999 652 22344444233432 223459999999994 3221 1233
Q ss_pred HHHHHhhhcCCCcEEEecccccccc
Q 013080 225 LVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 225 ~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
.+|..+. ..-.|++++||||...
T Consensus 322 ~~L~~L~--~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 322 EYLKQIP--EDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHhhh--cCCeEEEecCCCcchh
Confidence 4444442 2346999999999754
No 68
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.05 E-value=0.047 Score=54.02 Aligned_cols=23 Identities=17% Similarity=0.260 Sum_probs=21.5
Q ss_pred eChhhHHHHHHhcCceEEEeecC
Q 013080 372 WGPDCTEEFLKENHLKLIIRSHE 394 (450)
Q Consensus 372 fG~d~~~~FL~~n~l~~IIRgHe 394 (450)
-.++.++..|+..+-.+|.-||.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhd 225 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDD 225 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCC
Confidence 47899999999999999999998
No 69
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=96.94 E-value=0.0019 Score=68.03 Aligned_cols=72 Identities=21% Similarity=0.257 Sum_probs=44.6
Q ss_pred CceEEEecCc-Cc-H------HH----HHHHHHHhcCCCCCCceEEEeccccccCCchHHHH----HHHHHhhhcCCCcE
Q 013080 175 SEVIVVGDIL-GQ-F------HD----LVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVL----LVLLAWKVLMPHRV 238 (450)
Q Consensus 175 ~~i~ViGDIH-G~-~------~d----L~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl----~lL~~Lk~~~P~~v 238 (450)
++++.++|+| |. + .+ |..+.+ .+.....+ .+|+.||++|++..+.+.. .++..|+. .+-.|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~-~i~~~~~D-~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLE-QVQEHQVD-AIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHH-HHHhcCCC-EEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcE
Confidence 4789999999 42 1 11 233444 33333334 4999999999986654432 23334442 23469
Q ss_pred EEecccccccc
Q 013080 239 YLLRGNHETKN 249 (450)
Q Consensus 239 ~lLRGNHE~~~ 249 (450)
+++.||||...
T Consensus 78 ~~I~GNHD~~~ 88 (407)
T PRK10966 78 VVLAGNHDSVA 88 (407)
T ss_pred EEEcCCCCChh
Confidence 99999999754
No 70
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.74 E-value=0.0042 Score=60.30 Aligned_cols=70 Identities=20% Similarity=0.199 Sum_probs=41.0
Q ss_pred CceEEEecCc-CcHHHH------------HHHHHH---hcCCCCCCceEEEeccccccCCch---HHHHHHHHHhhhcCC
Q 013080 175 SEVIVVGDIL-GQFHDL------------VALFEE---NAGFPSDHRYFVFNGNYVDKGSWG---LEVLLVLLAWKVLMP 235 (450)
Q Consensus 175 ~~i~ViGDIH-G~~~dL------------~~il~~---~~g~~~~~~~~vFLGDyVDRG~~s---lEvl~lL~~Lk~~~P 235 (450)
.++.||+|+| |--..+ .+.+++ ....... +.+|++||+++....+ -++..++..+ .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~-d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~ 89 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGI-EALIINGDLKHEFKKGLEWRFIREFIEVT----F 89 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCC-CEEEEcCccccccCChHHHHHHHHHHHhc----C
Confidence 4689999999 532221 122331 2222223 4499999999765542 2223333332 2
Q ss_pred CcEEEecccccccc
Q 013080 236 HRVYLLRGNHETKN 249 (450)
Q Consensus 236 ~~v~lLRGNHE~~~ 249 (450)
..+++++||||...
T Consensus 90 ~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 90 RDLILIRGNHDALI 103 (225)
T ss_pred CcEEEECCCCCCcc
Confidence 37999999999754
No 71
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=96.73 E-value=0.0036 Score=58.88 Aligned_cols=71 Identities=14% Similarity=0.055 Sum_probs=43.7
Q ss_pred CceEEEecCcCcHH-----------HHHHHHHHhcCCCCCCceEEEeccccccCCc---hHHHHHHHHHhhhcCCCcEEE
Q 013080 175 SEVIVVGDILGQFH-----------DLVALFEENAGFPSDHRYFVFNGNYVDKGSW---GLEVLLVLLAWKVLMPHRVYL 240 (450)
Q Consensus 175 ~~i~ViGDIHG~~~-----------dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~---slEvl~lL~~Lk~~~P~~v~l 240 (450)
.++.+++|+|-... ...+.+++....... +.+|++||+++.+.. +.+.+..++.......-.+++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 81 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKP-DLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAA 81 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCC-CEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 47899999995221 112223212222233 349999999997765 355565554433333446899
Q ss_pred eccccc
Q 013080 241 LRGNHE 246 (450)
Q Consensus 241 LRGNHE 246 (450)
+.||||
T Consensus 82 ~~GNHD 87 (199)
T cd07383 82 TFGNHD 87 (199)
T ss_pred ECccCC
Confidence 999999
No 72
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=96.72 E-value=0.0045 Score=59.99 Aligned_cols=69 Identities=19% Similarity=0.220 Sum_probs=39.6
Q ss_pred eEEEecCcCc---------HH----HH-HHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEec
Q 013080 177 VIVVGDILGQ---------FH----DL-VALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLR 242 (450)
Q Consensus 177 i~ViGDIHG~---------~~----dL-~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLR 242 (450)
|+++.|+|-. +. ++ ..+.+.....-++.+.+|+.||+++++... +....+..++. .|..++++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEe
Confidence 5789999954 22 33 333331112212345599999999987643 22222222332 234589999
Q ss_pred ccccc
Q 013080 243 GNHET 247 (450)
Q Consensus 243 GNHE~ 247 (450)
||||.
T Consensus 79 GNHD~ 83 (232)
T cd07393 79 GNHDY 83 (232)
T ss_pred CCccc
Confidence 99997
No 73
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=96.71 E-value=0.061 Score=52.02 Aligned_cols=178 Identities=17% Similarity=0.142 Sum_probs=96.7
Q ss_pred CCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEecccc--ccCCchHHHHH-HHHHhhhcCCCcEEEeccccccccc
Q 013080 174 DSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYV--DKGSWGLEVLL-VLLAWKVLMPHRVYLLRGNHETKNC 250 (450)
Q Consensus 174 ~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyV--DRG~~slEvl~-lL~~Lk~~~P~~v~lLRGNHE~~~~ 250 (450)
.+++..+.|+||.++.+.+++. .+.....+- +++.||+. +.|+--.-.-. .+-.++ ..--.|+.++||-|...+
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~-~~~~~~~D~-lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v 79 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLN-AAADIRADL-LVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEV 79 (226)
T ss_pred cceEEEEeccccchHHHHHHHH-HHhhccCCE-EEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHH
Confidence 3789999999999999999998 666544444 99999999 88775221111 133333 234589999999776542
Q ss_pred ccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeeeceEEEEecCCCCCcCCCcccccccccccccccCCCCChHH
Q 013080 251 TLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIAQGVYTTHGGLFRRTCSASTQCSTGEKRQKLDTLSLGSLRE 330 (450)
Q Consensus 251 ~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~ 330 (450)
- ......+.. +. +-..-+++--||-=||..+.+.-+ +...+-++
T Consensus 80 ~-------~~l~~~~~~----v~----------~~v~~i~~~~~~G~Ggsn~tp~nt---------------~~e~~E~~ 123 (226)
T COG2129 80 I-------DVLKNAGVN----VH----------GRVVEIGGYGFVGFGGSNPTPFNT---------------PREFSEDE 123 (226)
T ss_pred H-------HHHHhcccc----cc----------cceEEecCcEEEEecccCCCCCCC---------------ccccCHHH
Confidence 2 111222211 11 111223333444457776544211 22234445
Q ss_pred HhhhccccccCCCCcccccccc-cCCCCCCCcccccCCCeeeeChhhHHHHHHhcCceEEEeecC
Q 013080 331 FAKVNRFLEDVPENDLLSDVLW-SDPSSEAGLRENTKKFGLLWGPDCTEEFLKENHLKLIIRSHE 394 (450)
Q Consensus 331 i~~i~R~~~~p~~~~l~~dlLW-sDP~~~~g~~~n~RG~g~~fG~d~~~~FL~~n~l~~IIRgHe 394 (450)
|....+.......+.. .=++. .-|.... ....-| -..-|..+++++.++.+-.+.|+||=
T Consensus 124 I~s~l~~~v~~~~~~~-~Il~~HaPP~gt~--~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHI 184 (226)
T COG2129 124 IYSKLKSLVKKADNPV-NILLTHAPPYGTL--LDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHI 184 (226)
T ss_pred HHHHHHHHHhcccCcc-eEEEecCCCCCcc--ccCCCC-ccccchHHHHHHHHHhCCceEEEeee
Confidence 5443333221111110 01111 1122210 001112 13568899999999999999999986
No 74
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.70 E-value=0.0045 Score=65.13 Aligned_cols=56 Identities=11% Similarity=0.117 Sum_probs=42.2
Q ss_pred CCCceEEEecCcCc------------HHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHh
Q 013080 173 EDSEVIVVGDILGQ------------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW 230 (450)
Q Consensus 173 ~~~~i~ViGDIHG~------------~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~L 230 (450)
+.++|.+++|+|-- +..|.++++ .+.....+- +|+.||++|++.-|.+++..++.+
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~-~a~~~~vD~-VLiaGDLFd~~~Ps~~~~~~~~~~ 69 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQ-IAKEQDVDM-ILLGGDLFHENKPSRKSLYQVLRS 69 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHH-HHHHcCCCE-EEECCccCCCCCCCHHHHHHHHHH
Confidence 34789999999932 556777877 665444444 999999999999999988765543
No 75
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=96.63 E-value=0.0034 Score=57.28 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=28.1
Q ss_pred ceEEEeccccccCCchH-HHH-HHHHHhhhc---C-CCcEEEecccccccc
Q 013080 205 RYFVFNGNYVDKGSWGL-EVL-LVLLAWKVL---M-PHRVYLLRGNHETKN 249 (450)
Q Consensus 205 ~~~vFLGDyVDRG~~sl-Evl-~lL~~Lk~~---~-P~~v~lLRGNHE~~~ 249 (450)
+.+|++||++|.|..+. +.. ..+..++.. . +-.++++.||||...
T Consensus 40 d~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 40 DVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 45999999999886532 222 222222221 2 246999999999754
No 76
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.39 E-value=0.0077 Score=54.93 Aligned_cols=68 Identities=19% Similarity=0.259 Sum_probs=48.4
Q ss_pred EEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccc
Q 013080 178 IVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHE 246 (450)
Q Consensus 178 ~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE 246 (450)
.|+||+||+++.+..-+++.......-+-+|++||+..-...+-+ +.-++.=...-|--++++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC
Confidence 489999999999988777323333344569999999976655533 33333334467778999999998
No 77
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=96.16 E-value=0.018 Score=56.19 Aligned_cols=72 Identities=19% Similarity=0.253 Sum_probs=48.3
Q ss_pred ceEEEecCcCc------HHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHh--hhcCCCcEEEecccccc
Q 013080 176 EVIVVGDILGQ------FHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW--KVLMPHRVYLLRGNHET 247 (450)
Q Consensus 176 ~i~ViGDIHG~------~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~L--k~~~P~~v~lLRGNHE~ 247 (450)
++..|+|+|-- ...+..+++ ....... +.+|+.||+.+.|.. +-...+..+ +...|..+++++||||.
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~-~i~~~~~-D~~v~tGDl~~~~~~--~~~~~~~~~l~~~~~~~~~~~vpGNHD~ 77 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLA-AIEQLKP-DLLVVTGDLTNDGEP--EEYRRLKELLARLELPAPVIVVPGNHDA 77 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHH-HHhcCCC-CEEEEccCcCCCCCH--HHHHHHHHHHhhccCCCceEeeCCCCcC
Confidence 68899999966 234555666 5554444 449999999999632 222222222 23567789999999998
Q ss_pred cccc
Q 013080 248 KNCT 251 (450)
Q Consensus 248 ~~~~ 251 (450)
...+
T Consensus 78 ~~~~ 81 (301)
T COG1409 78 RVVN 81 (301)
T ss_pred CchH
Confidence 7643
No 78
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.03 E-value=0.0095 Score=59.06 Aligned_cols=70 Identities=16% Similarity=0.145 Sum_probs=40.3
Q ss_pred CceEEEecCcC----cHHHHHHHHHHhcCCCCCCceEEEecccccc-CCch---HHHH-HHHHHhhhcCCCcEEEecccc
Q 013080 175 SEVIVVGDILG----QFHDLVALFEENAGFPSDHRYFVFNGNYVDK-GSWG---LEVL-LVLLAWKVLMPHRVYLLRGNH 245 (450)
Q Consensus 175 ~~i~ViGDIHG----~~~dL~~il~~~~g~~~~~~~~vFLGDyVDR-G~~s---lEvl-~lL~~Lk~~~P~~v~lLRGNH 245 (450)
-++.|+||.|. ....+..+.+ . ...-+-+|++||+++- |..+ -+.+ ..+-.+.... -++.++|||
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~-~---~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~~~GNH 78 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEK-E---LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV--PYMVTPGNH 78 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHh-c---cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC--CcEEcCccc
Confidence 47999999995 2333333333 2 2233449999999954 4321 2222 2222222233 488999999
Q ss_pred ccccc
Q 013080 246 ETKNC 250 (450)
Q Consensus 246 E~~~~ 250 (450)
|....
T Consensus 79 D~~~~ 83 (294)
T cd00839 79 EADYN 83 (294)
T ss_pred ccccC
Confidence 98653
No 79
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.02 E-value=0.015 Score=57.23 Aligned_cols=70 Identities=14% Similarity=0.106 Sum_probs=39.7
Q ss_pred eEEEecCcCcHH------HH-HHHHHHhcCCCCCCceEEEeccccccCCc--------hH---HHHHHHHHhhhcCCCcE
Q 013080 177 VIVVGDILGQFH------DL-VALFEENAGFPSDHRYFVFNGNYVDKGSW--------GL---EVLLVLLAWKVLMPHRV 238 (450)
Q Consensus 177 i~ViGDIHG~~~------dL-~~il~~~~g~~~~~~~~vFLGDyVDRG~~--------sl---Evl~lL~~Lk~~~P~~v 238 (450)
++.++|+|-... .. ..+++ .+.....+ .+|++||++|++.. .. +.+..+..+....+..+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~-~i~~~~pd-~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSN-FIDVIKPA-LVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKW 79 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHH-HHHhhCCC-EEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceE
Confidence 567899995221 12 22333 22222233 49999999998752 11 11222222223335679
Q ss_pred EEeccccccc
Q 013080 239 YLLRGNHETK 248 (450)
Q Consensus 239 ~lLRGNHE~~ 248 (450)
+.++||||..
T Consensus 80 ~~v~GNHD~~ 89 (256)
T cd07401 80 FDIRGNHDLF 89 (256)
T ss_pred EEeCCCCCcC
Confidence 9999999985
No 80
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.86 E-value=0.015 Score=56.44 Aligned_cols=67 Identities=18% Similarity=0.248 Sum_probs=42.9
Q ss_pred ceEEEecCcCcH---------HHHHHHHHHhcCCCCCCceEEEeccccccCCchH-----HHHHHHHHhhhcCCCcEEEe
Q 013080 176 EVIVVGDILGQF---------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYLL 241 (450)
Q Consensus 176 ~i~ViGDIHG~~---------~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl-----Evl~lL~~Lk~~~P~~v~lL 241 (450)
+|+.++|+||.+ ..|..+++ .......+..++..||+++.++.+- .++..|-++ -. . ++.
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~-~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~---g~-d-~~~ 75 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIK-EERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL---GY-D-AVT 75 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHH-HHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc---CC-C-EEe
Confidence 578999999887 55666666 3333233444788999999887653 344444333 22 3 345
Q ss_pred ccccccc
Q 013080 242 RGNHETK 248 (450)
Q Consensus 242 RGNHE~~ 248 (450)
.||||..
T Consensus 76 ~GNHe~d 82 (252)
T cd00845 76 IGNHEFD 82 (252)
T ss_pred ecccccc
Confidence 5999963
No 81
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.84 E-value=0.019 Score=59.81 Aligned_cols=74 Identities=20% Similarity=0.259 Sum_probs=49.9
Q ss_pred CceEEEecCc-C------------cHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHh-hhcC--CCcE
Q 013080 175 SEVIVVGDIL-G------------QFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW-KVLM--PHRV 238 (450)
Q Consensus 175 ~~i~ViGDIH-G------------~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~L-k~~~--P~~v 238 (450)
+++.-++|+| | .+.+|..+++ .+-.... +-+|.-||+.|++.-|.+++..+... +.+. .=-|
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~-~a~~~~v-D~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLE-IAKEEKV-DFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHH-HHHHccC-CEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 4678888988 3 1233444444 3333333 44999999999999998888766543 3222 1369
Q ss_pred EEeccccccccc
Q 013080 239 YLLRGNHETKNC 250 (450)
Q Consensus 239 ~lLRGNHE~~~~ 250 (450)
+++.||||...-
T Consensus 79 ~~I~GNHD~~~~ 90 (390)
T COG0420 79 VVIAGNHDSPSR 90 (390)
T ss_pred EEecCCCCchhc
Confidence 999999999763
No 82
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=95.79 E-value=0.048 Score=49.94 Aligned_cols=71 Identities=13% Similarity=0.097 Sum_probs=41.7
Q ss_pred ceEEEecCc------------CcHHHHHH-HHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEec
Q 013080 176 EVIVVGDIL------------GQFHDLVA-LFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLR 242 (450)
Q Consensus 176 ~i~ViGDIH------------G~~~dL~~-il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLR 242 (450)
.++.+||+| .+++.... |+.+....-.+++.+.+|||+.-.-..--+...++- +-|+++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Ile----rLnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILE----RLNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHH----HcCCcEEEee
Confidence 478999998 23333322 233222233445669999999854333222222222 3478999999
Q ss_pred cccccccc
Q 013080 243 GNHETKNC 250 (450)
Q Consensus 243 GNHE~~~~ 250 (450)
||||.---
T Consensus 81 GNhDk~~~ 88 (186)
T COG4186 81 GNHDKCHP 88 (186)
T ss_pred CCCCCCcc
Confidence 99997543
No 83
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=95.67 E-value=0.041 Score=53.49 Aligned_cols=70 Identities=16% Similarity=0.233 Sum_probs=39.3
Q ss_pred EEEecCc--CcH---HHHHHHHHHhcCCCC---CCceEEEeccccccCCc------------hHH----HHHHHHHhhhc
Q 013080 178 IVVGDIL--GQF---HDLVALFEENAGFPS---DHRYFVFNGNYVDKGSW------------GLE----VLLVLLAWKVL 233 (450)
Q Consensus 178 ~ViGDIH--G~~---~dL~~il~~~~g~~~---~~~~~vFLGDyVDRG~~------------slE----vl~lL~~Lk~~ 233 (450)
++++|+| +.. ..+..+++...+... .-+.+|++||++|+... ..+ +..++-.+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 5789999 332 222334442234322 23459999999997310 011 222333332
Q ss_pred CCCcEEEecccccccc
Q 013080 234 MPHRVYLLRGNHETKN 249 (450)
Q Consensus 234 ~P~~v~lLRGNHE~~~ 249 (450)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2357999999999753
No 84
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=95.64 E-value=0.021 Score=52.90 Aligned_cols=45 Identities=24% Similarity=0.296 Sum_probs=28.5
Q ss_pred ceEEEeccccccCCchH--H---HHHHHHHhhhc-C----CCcEEEecccccccc
Q 013080 205 RYFVFNGNYVDKGSWGL--E---VLLVLLAWKVL-M----PHRVYLLRGNHETKN 249 (450)
Q Consensus 205 ~~~vFLGDyVDRG~~sl--E---vl~lL~~Lk~~-~----P~~v~lLRGNHE~~~ 249 (450)
+.+|++||++|.|.... + .+..+..+... . +-.++++.||||...
T Consensus 47 d~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 47 DVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34999999999887432 2 22222222111 1 346999999999864
No 85
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.56 E-value=0.029 Score=54.72 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=43.7
Q ss_pred CceEEEecCcCcHHH----------------HHHHHHHhcCCCCCCceEEEeccccccCCc-----hHHHHHHHHHhhhc
Q 013080 175 SEVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSW-----GLEVLLVLLAWKVL 233 (450)
Q Consensus 175 ~~i~ViGDIHG~~~d----------------L~~il~~~~g~~~~~~~~vFLGDyVDRG~~-----slEvl~lL~~Lk~~ 233 (450)
.++.|+.|+|=-|.. +.+.+.+....-. .+.+|.|||.-.-.+. ..|+-.++-.+...
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~-p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYG-PKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcC-CCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 689999999943332 3333331222222 3449999999854333 34444444444322
Q ss_pred CCCcEEEecccccccccc
Q 013080 234 MPHRVYLLRGNHETKNCT 251 (450)
Q Consensus 234 ~P~~v~lLRGNHE~~~~~ 251 (450)
.+.+++||||...-.
T Consensus 99 ---evi~i~GNHD~~i~~ 113 (235)
T COG1407 99 ---EVIIIRGNHDNGIEE 113 (235)
T ss_pred ---cEEEEeccCCCcccc
Confidence 499999999986533
No 86
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=95.36 E-value=0.026 Score=53.63 Aligned_cols=44 Identities=18% Similarity=0.357 Sum_probs=31.1
Q ss_pred ceEEEeccccccCCch--HHHHHHHHHhhhcCC----CcEEEeccccccc
Q 013080 205 RYFVFNGNYVDKGSWG--LEVLLVLLAWKVLMP----HRVYLLRGNHETK 248 (450)
Q Consensus 205 ~~~vFLGDyVDRG~~s--lEvl~lL~~Lk~~~P----~~v~lLRGNHE~~ 248 (450)
+.+||+||++|.|+.+ .|....+..++..++ -.++.+.||||-.
T Consensus 44 D~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 44 DIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 3499999999999964 335555555543322 4678999999975
No 87
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.03 E-value=0.088 Score=51.35 Aligned_cols=101 Identities=19% Similarity=0.271 Sum_probs=57.4
Q ss_pred EEecCcCc-----H-HHHHHHHHHhcCCCCCCceEEEecccccc--CCc--h---HHHHHHHHHhhhcCCCcEEEecccc
Q 013080 179 VVGDILGQ-----F-HDLVALFEENAGFPSDHRYFVFNGNYVDK--GSW--G---LEVLLVLLAWKVLMPHRVYLLRGNH 245 (450)
Q Consensus 179 ViGDIHG~-----~-~dL~~il~~~~g~~~~~~~~vFLGDyVDR--G~~--s---lEvl~lL~~Lk~~~P~~v~lLRGNH 245 (450)
.|+|+|=. . +-|+..++ ..+++.+.++++||++|- |.. + -+|...|..+ .....+++.+.|||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~---~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~ 77 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLR---EEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNH 77 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHH---hccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCch
Confidence 57888833 2 33455555 222344559999999972 322 1 2344444433 24567899999999
Q ss_pred cccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeee---ceEEEEecCCCCC
Q 013080 246 ETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIA---QGVYTTHGGLFRR 303 (450)
Q Consensus 246 E~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~---~~il~vHGGi~~~ 303 (450)
|... ...+ ....| .+.-+|-..+++ .+++++||-....
T Consensus 78 Dfll-~~~f------~~~~g-------------~~~l~~~~~~~~l~g~~~Ll~HGD~f~t 118 (237)
T COG2908 78 DFLL-GKRF------AQEAG-------------GMTLLPDPIVLDLYGKRILLAHGDTFCT 118 (237)
T ss_pred HHHH-HHHH------HhhcC-------------ceEEcCcceeeeecCcEEEEEeCCcccc
Confidence 9433 2111 11111 133455544443 7999999988653
No 88
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=94.57 E-value=0.068 Score=50.78 Aligned_cols=67 Identities=15% Similarity=0.060 Sum_probs=41.6
Q ss_pred cCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHH-HHHHHHhhhcC---------------------CCcEE
Q 013080 182 DILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEV-LLVLLAWKVLM---------------------PHRVY 239 (450)
Q Consensus 182 DIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEv-l~lL~~Lk~~~---------------------P~~v~ 239 (450)
|++|+=.=|.++++ .+-+.-..+.++||||++|.|--+-+- -.....++..+ .-.++
T Consensus 24 d~~~~D~YL~~~~~-~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 24 DLFGNDYFLGHIVS-MMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred hhhhhHHHHHHHHH-HHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 55676666788888 444433445599999999997533222 22333332222 13568
Q ss_pred Eecccccccc
Q 013080 240 LLRGNHETKN 249 (450)
Q Consensus 240 lLRGNHE~~~ 249 (450)
+|.||||.-.
T Consensus 103 ~V~GNHDIG~ 112 (193)
T cd08164 103 NIAGNHDVGY 112 (193)
T ss_pred EECCcccCCC
Confidence 8999999843
No 89
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=94.45 E-value=0.13 Score=54.02 Aligned_cols=74 Identities=22% Similarity=0.399 Sum_probs=48.4
Q ss_pred CCceEEEecCc--C---------cH------HHHHHHHHHhcCCCCCCceEEEeccccccCCch--HHHHHHHHHhhhcC
Q 013080 174 DSEVIVVGDIL--G---------QF------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG--LEVLLVLLAWKVLM 234 (450)
Q Consensus 174 ~~~i~ViGDIH--G---------~~------~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~s--lEvl~lL~~Lk~~~ 234 (450)
..++..|+|-| | -+ .-|.+.|. ..-+.-..+..+||||++|-|.+. -|--...-.+|..+
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~-~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf 126 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFD-MSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIF 126 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHH-HHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhh
Confidence 35678888865 3 12 22455666 555555556689999999999874 33334444555555
Q ss_pred CC----cEEEeccccccc
Q 013080 235 PH----RVYLLRGNHETK 248 (450)
Q Consensus 235 P~----~v~lLRGNHE~~ 248 (450)
|. .+..+.||||--
T Consensus 127 ~~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 127 GRKGNIKVIYIAGNHDIG 144 (410)
T ss_pred CCCCCCeeEEeCCccccc
Confidence 53 688999999973
No 90
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=94.16 E-value=0.064 Score=52.12 Aligned_cols=73 Identities=18% Similarity=0.247 Sum_probs=43.0
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHH-------------------------HHHHHHH
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLE-------------------------VLLVLLA 229 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slE-------------------------vl~lL~~ 229 (450)
.+|..++|.||+++.|.++.+ .+.....+. +||+||++--+..+-| .+.-.+.
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~-~~~e~~~D~-~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~ 83 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVE-VIPEKGPDA-VVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFR 83 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHH-HHHHHT-SE-EEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHh-hccccCCCE-EEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHH
Confidence 478999999999999999988 554444555 9999999865444333 3333333
Q ss_pred hhhcCCCcEEEecccccccc
Q 013080 230 WKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 230 Lk~~~P~~v~lLRGNHE~~~ 249 (450)
.--..+--+++++||||...
T Consensus 84 ~L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 84 ILGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHHCC-SEEEEE--TTS-SH
T ss_pred HHHhcCCcEEEecCCCCchH
Confidence 22344558999999999854
No 91
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=93.89 E-value=0.14 Score=51.40 Aligned_cols=72 Identities=25% Similarity=0.329 Sum_probs=47.2
Q ss_pred CCceEEEecCcCcHHH--HHHHHHHhcCCCCCCceEEEecccccc-CCchHHH-HHHHHHhhhcCCCcEEEecccccccc
Q 013080 174 DSEVIVVGDILGQFHD--LVALFEENAGFPSDHRYFVFNGNYVDK-GSWGLEV-LLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 174 ~~~i~ViGDIHG~~~d--L~~il~~~~g~~~~~~~~vFLGDyVDR-G~~slEv-l~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
.-+|+-+.|+|-.... ..+.+...... .+ +-+++.|||+|+ .+.+.+. +..|..|+ .|-.+|.+.||||...
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~-~~-DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~ 119 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANE-LP-DLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGV 119 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhc-CC-CEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEeccccccc
Confidence 3568999999976655 22223212222 22 559999999996 6655554 44555554 5567999999998765
No 92
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=93.69 E-value=0.099 Score=51.80 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=37.6
Q ss_pred ceEEEecCcCcH----------------HHHHHHHHHhcCCCCCCceEEEeccccccCCchH-----------HHHHHHH
Q 013080 176 EVIVVGDILGQF----------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----------EVLLVLL 228 (450)
Q Consensus 176 ~i~ViGDIHG~~----------------~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl-----------Evl~lL~ 228 (450)
+|+.++|+||.+ ..|..+++ .......+.-++..||+++..+.+- .++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln 80 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIK-KARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMN 80 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHH-HHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHH
Confidence 478899999997 33555665 3332222332333799998765322 2344443
Q ss_pred HhhhcCCCcEEEecccccc
Q 013080 229 AWKVLMPHRVYLLRGNHET 247 (450)
Q Consensus 229 ~Lk~~~P~~v~lLRGNHE~ 247 (450)
.+ -+ -++..||||.
T Consensus 81 ~~---g~--d~~~lGNHe~ 94 (277)
T cd07410 81 AL---GY--DAGTLGNHEF 94 (277)
T ss_pred hc---CC--CEEeecccCc
Confidence 33 22 2455699995
No 93
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=93.59 E-value=0.0023 Score=66.02 Aligned_cols=96 Identities=14% Similarity=-0.164 Sum_probs=74.1
Q ss_pred CCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhc
Q 013080 203 DHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRT 282 (450)
Q Consensus 203 ~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~ 282 (450)
.....|+++++++++.+.++.+.+-+..+..+..+.-..++||+. .+++..++...-...+...+++..++-+..
T Consensus 47 d~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~-----~~~~R~~LVlp~l~S~riyvid~~~ep~~~ 121 (476)
T KOG0918|consen 47 DYLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGD-----SSFKRRYLVLPSLNSGRIYVIDVKTEPRKP 121 (476)
T ss_pred cceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccC-----cchhhhheeecccccCceEEEEeccCcCcc
Confidence 334489999999999999999999999999998899999999944 344555544333333345567778888888
Q ss_pred CCcceeeeceEEEEecCCCCCc
Q 013080 283 LPLATIIAQGVYTTHGGLFRRT 304 (450)
Q Consensus 283 LPlaaii~~~il~vHGGi~~~~ 304 (450)
++...+.+ ++++.||+.+|..
T Consensus 122 ~l~k~i~~-~il~~~~l~~Pht 142 (476)
T KOG0918|consen 122 SLEKTIDP-DILEKTGLACPHT 142 (476)
T ss_pred ceeeeech-hhHhhcCCcCCcc
Confidence 88866655 9999999998753
No 94
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.47 E-value=0.095 Score=52.52 Aligned_cols=67 Identities=22% Similarity=0.374 Sum_probs=42.1
Q ss_pred ceEEEecCcCcHHH--------------HHHHHHHhcCCCCCCceEEEeccccccCCc-h-----HHHHHHHHHhhhcCC
Q 013080 176 EVIVVGDILGQFHD--------------LVALFEENAGFPSDHRYFVFNGNYVDKGSW-G-----LEVLLVLLAWKVLMP 235 (450)
Q Consensus 176 ~i~ViGDIHG~~~d--------------L~~il~~~~g~~~~~~~~vFLGDyVDRG~~-s-----lEvl~lL~~Lk~~~P 235 (450)
+|+.+.|+||++.. |..+++ .......+.-++..||+++..+. + ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~--- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLD-EARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV--- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHH-HHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC---
Confidence 47889999998643 666666 44333344458889999987664 2 234555544432
Q ss_pred CcEEEeccccccc
Q 013080 236 HRVYLLRGNHETK 248 (450)
Q Consensus 236 ~~v~lLRGNHE~~ 248 (450)
.+ +..||||.-
T Consensus 78 -Da-~t~GNHefd 88 (288)
T cd07412 78 -DA-SAVGNHEFD 88 (288)
T ss_pred -ee-eeecccccc
Confidence 33 555999964
No 95
>PLN02533 probable purple acid phosphatase
Probab=92.87 E-value=0.15 Score=54.17 Aligned_cols=70 Identities=16% Similarity=0.180 Sum_probs=38.4
Q ss_pred CceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchH--HHH-HHHHHhhhcCCCcEEEecccccccc
Q 013080 175 SEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--EVL-LVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl--Evl-~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
-++.|+||+|-. ......++ .+..... +-+|++||+++-+.+.- +.. .++-.+....| ++.+.||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~-~i~~~~p-D~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLE-HVSKWDY-DVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHH-HHHhcCC-CEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 468999999632 11123333 2222223 34899999997654321 111 12222222334 788999999864
No 96
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=91.27 E-value=0.4 Score=47.06 Aligned_cols=71 Identities=17% Similarity=0.222 Sum_probs=39.8
Q ss_pred ceEEEecCcCc--H--HHHHHHHHHhcCCCCCCceEEEecccc-ccCCchH------HHHHHHHHhhhcCCCcEEEeccc
Q 013080 176 EVIVVGDILGQ--F--HDLVALFEENAGFPSDHRYFVFNGNYV-DKGSWGL------EVLLVLLAWKVLMPHRVYLLRGN 244 (450)
Q Consensus 176 ~i~ViGDIHG~--~--~dL~~il~~~~g~~~~~~~~vFLGDyV-DRG~~sl------Evl~lL~~Lk~~~P~~v~lLRGN 244 (450)
+++++||.=.. . .++...+.+.+..... +-+|++||+| +-|..+. +.+.-++.. ....--++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~-dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGP-DFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCC-CEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCC
Confidence 47899998653 2 3444444423333333 3389999987 5564221 222222221 0123359999999
Q ss_pred cccc
Q 013080 245 HETK 248 (450)
Q Consensus 245 HE~~ 248 (450)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9976
No 97
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=91.21 E-value=0.42 Score=47.12 Aligned_cols=66 Identities=15% Similarity=0.207 Sum_probs=36.8
Q ss_pred ceEEEecCcCcHHH----------------------HHHHHHHhcCCC-CCCceEEEeccccccCCchH-----HHHHHH
Q 013080 176 EVIVVGDILGQFHD----------------------LVALFEENAGFP-SDHRYFVFNGNYVDKGSWGL-----EVLLVL 227 (450)
Q Consensus 176 ~i~ViGDIHG~~~d----------------------L~~il~~~~g~~-~~~~~~vFLGDyVDRG~~sl-----Evl~lL 227 (450)
.++-+.|+||++.. +..+++ ..... ..+..++..||+++..+.+. .++..+
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~-~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 80 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIK-RIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDAL 80 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHH-HHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHH
Confidence 36778889887533 444555 33222 33333466999998876542 333444
Q ss_pred HHhhhcCCCcEEEeccccccc
Q 013080 228 LAWKVLMPHRVYLLRGNHETK 248 (450)
Q Consensus 228 ~~Lk~~~P~~v~lLRGNHE~~ 248 (450)
-.+ +-. .+. ||||..
T Consensus 81 ~~~----g~d-a~~-GNHefd 95 (264)
T cd07411 81 NAL----GVD-AMV-GHWEFT 95 (264)
T ss_pred Hhh----CCe-EEe-cccccc
Confidence 332 223 334 999953
No 98
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=90.74 E-value=0.34 Score=47.54 Aligned_cols=65 Identities=18% Similarity=0.225 Sum_probs=39.0
Q ss_pred ceEEEecCcCcH----------HHHHHHHHHhcCCCCCCceEEEeccccccCCchH-----HHHHHHHHhhhcCCCcEEE
Q 013080 176 EVIVVGDILGQF----------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYL 240 (450)
Q Consensus 176 ~i~ViGDIHG~~----------~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl-----Evl~lL~~Lk~~~P~~v~l 240 (450)
+|+-+.|+||++ ..+..+++ ..... .+.-++..||+++..+.+. .++..+-.+ .-.+ +
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~-~~~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~ 74 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKK-EMNKL-DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-V 74 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHH-HHHhc-CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-E
Confidence 477889999985 44566666 33222 3455788999998766432 223333222 1134 4
Q ss_pred ecccccc
Q 013080 241 LRGNHET 247 (450)
Q Consensus 241 LRGNHE~ 247 (450)
..||||.
T Consensus 75 ~~GNHef 81 (257)
T cd07408 75 TPGNHEF 81 (257)
T ss_pred ccccccc
Confidence 5699995
No 99
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.60 E-value=3.1 Score=38.03 Aligned_cols=62 Identities=26% Similarity=0.379 Sum_probs=48.0
Q ss_pred eEEEecCc--CcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEeccccccc
Q 013080 177 VIVVGDIL--GQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETK 248 (450)
Q Consensus 177 i~ViGDIH--G~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~ 248 (450)
+.|+||+| -...+|-.-|+ +.-.|..-.+++++|++. |.|++.+|-.+. +.++++||-.|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFk-klLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFK-KLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN 66 (183)
T ss_pred EEEeccccCCccccccCHHHH-hccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc
Confidence 67999998 34566777777 555777777899999965 789999986663 4899999987754
No 100
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=89.75 E-value=0.46 Score=52.16 Aligned_cols=42 Identities=19% Similarity=0.255 Sum_probs=36.1
Q ss_pred ceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccc
Q 013080 205 RYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCT 251 (450)
Q Consensus 205 ~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~ 251 (450)
+++-.+||+.||||.+--++..|+.. | +|=+-.||||--.|.
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm~~----h-svDIQWGNHDIlWMG 227 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLMNY----H-SVDIQWGNHDILWMG 227 (640)
T ss_pred hheeecccccCCCCChhHHHHHHhcC----C-CccccccchHHHHHH
Confidence 34889999999999999999999844 3 888999999998764
No 101
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=89.07 E-value=0.81 Score=45.67 Aligned_cols=69 Identities=17% Similarity=0.224 Sum_probs=48.4
Q ss_pred CceEEEecCcCc--HHHHHHHHHHhcCCCCCCceEEEeccccccC-CchHHHHHHHHHhhhcCCCcEEEecccccccc
Q 013080 175 SEVIVVGDILGQ--FHDLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 175 ~~i~ViGDIHG~--~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG-~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
++|.++|||=|. ...|...|. .+......+-.|.+||...-| --+-++...|..+-. .++.+ |||+...
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~-~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~Dk 72 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLP-QLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWFQ 72 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHH-HHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhccC
Confidence 579999999999 466666666 443333344477799999766 456778888876543 56655 9999854
No 102
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=88.45 E-value=0.99 Score=45.01 Aligned_cols=67 Identities=15% Similarity=0.154 Sum_probs=37.6
Q ss_pred ceEEEecCcCcH---------------------HHHHHHHHHhcCCCCCCceEEEeccccccCCch-----HHHHHHHHH
Q 013080 176 EVIVVGDILGQF---------------------HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLA 229 (450)
Q Consensus 176 ~i~ViGDIHG~~---------------------~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~s-----lEvl~lL~~ 229 (450)
+|+-++|+||++ ..+..+++ .......+.-++..||+++..+.+ ..++..+-.
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVK-ELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHH-HHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 467789999875 44555555 332223334356689999876543 223333322
Q ss_pred hhhcCCCcEEEeccccccc
Q 013080 230 WKVLMPHRVYLLRGNHETK 248 (450)
Q Consensus 230 Lk~~~P~~v~lLRGNHE~~ 248 (450)
+ -. .+. ..||||..
T Consensus 81 ~---g~-D~~-~lGNHefd 94 (281)
T cd07409 81 L---GY-DAM-TLGNHEFD 94 (281)
T ss_pred c---CC-CEE-Eecccccc
Confidence 2 22 333 45999964
No 103
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=87.56 E-value=1.1 Score=42.20 Aligned_cols=47 Identities=21% Similarity=0.198 Sum_probs=32.4
Q ss_pred CCCCCCceEEEecccc--ccCCchHHHHHHHHHhhhcCCCcEEEecccccccc
Q 013080 199 GFPSDHRYFVFNGNYV--DKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 199 g~~~~~~~~vFLGDyV--DRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
+..+.++.++.-||+- =|=++..+-+.+|-+| |+.=+++|||||...
T Consensus 39 ~~v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 39 SKVSPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred hcCChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 3444556578889974 2344455556666544 899999999999865
No 104
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.60 E-value=1.6 Score=46.31 Aligned_cols=71 Identities=23% Similarity=0.376 Sum_probs=53.5
Q ss_pred CCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccc
Q 013080 174 DSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 245 (450)
Q Consensus 174 ~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNH 245 (450)
+.+|.||||.-|+++.|.+-.+........-+-++++|++.+--.++-|++.+...-+ ..|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 3689999999999999988776333333334559999999987777888888776654 5676777777765
No 105
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=85.58 E-value=3.6 Score=44.13 Aligned_cols=77 Identities=23% Similarity=0.328 Sum_probs=42.5
Q ss_pred CceEEEecCcC-cHHHHHHH----HHHhcCC---CCCCceEEEecccccc-CCc-----------hHHHHHHHHHhhhcC
Q 013080 175 SEVIVVGDILG-QFHDLVAL----FEENAGF---PSDHRYFVFNGNYVDK-GSW-----------GLEVLLVLLAWKVLM 234 (450)
Q Consensus 175 ~~i~ViGDIHG-~~~dL~~i----l~~~~g~---~~~~~~~vFLGDyVDR-G~~-----------slEvl~lL~~Lk~~~ 234 (450)
..+.+++|+|= .-.-++.. ++...|. .+.-..++..||.||. |-+ ..|-...+..+--.-
T Consensus 226 v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~v 305 (481)
T COG1311 226 VYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQV 305 (481)
T ss_pred eEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhC
Confidence 35889999994 33333333 3311121 1222457778899994 322 223334444333344
Q ss_pred CC--cEEEecccccccccc
Q 013080 235 PH--RVYLLRGNHETKNCT 251 (450)
Q Consensus 235 P~--~v~lLRGNHE~~~~~ 251 (450)
|. .|++.+|||+..-..
T Consensus 306 p~~I~v~i~PGnhDa~r~a 324 (481)
T COG1311 306 PEHIKVFIMPGNHDAVRQA 324 (481)
T ss_pred CCCceEEEecCCCCccccc
Confidence 44 578899999986543
No 106
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=84.46 E-value=2.6 Score=43.61 Aligned_cols=74 Identities=15% Similarity=0.273 Sum_probs=43.9
Q ss_pred CceEEEecCcCcHHHHHHHHHH--hcCCCCCCceEEEeccccc-cCCc---hH---------HHHHHHHHhhhcCCCcEE
Q 013080 175 SEVIVVGDILGQFHDLVALFEE--NAGFPSDHRYFVFNGNYVD-KGSW---GL---------EVLLVLLAWKVLMPHRVY 239 (450)
Q Consensus 175 ~~i~ViGDIHG~~~dL~~il~~--~~g~~~~~~~~vFLGDyVD-RG~~---sl---------Evl~lL~~Lk~~~P~~v~ 239 (450)
++|.|=|=-||+++.+-+-+.. ..|-. .-+.+++.||+=. |... |+ ..+.--+.-....|--.+
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~t-kVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTI 79 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNT-KVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTI 79 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCC-CccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEE
Confidence 5788999999999988754430 33332 3345999999852 2211 11 111111222334555567
Q ss_pred Eecccccccc
Q 013080 240 LLRGNHETKN 249 (450)
Q Consensus 240 lLRGNHE~~~ 249 (450)
++-||||.+.
T Consensus 80 FIGGNHEAsn 89 (456)
T KOG2863|consen 80 FIGGNHEASN 89 (456)
T ss_pred EecCchHHHH
Confidence 8999999864
No 107
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=83.67 E-value=2.7 Score=41.79 Aligned_cols=64 Identities=17% Similarity=0.205 Sum_probs=36.3
Q ss_pred HHHHHHHHHhcCCCCCCceEEEeccccccCCchH--H------HHHHHHHhhhcCC-CcEEEecccccccccc
Q 013080 188 HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--E------VLLVLLAWKVLMP-HRVYLLRGNHETKNCT 251 (450)
Q Consensus 188 ~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl--E------vl~lL~~Lk~~~P-~~v~lLRGNHE~~~~~ 251 (450)
..+...++......++-+-+|+.||+|+.+.... + .-.+.-.++..+| --|+.+.||||....+
T Consensus 53 ~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 53 RLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 3445555522222123344899999998876531 1 1122233444444 3699999999986543
No 108
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=83.52 E-value=1.6 Score=52.15 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=39.9
Q ss_pred CceEEEecCcCcH---HHHHHHHHHhcCCCCCCceEEEeccccccCCchH-----HHHHHHHHhhhcCCCcEEEeccccc
Q 013080 175 SEVIVVGDILGQF---HDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-----EVLLVLLAWKVLMPHRVYLLRGNHE 246 (450)
Q Consensus 175 ~~i~ViGDIHG~~---~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl-----Evl~lL~~Lk~~~P~~v~lLRGNHE 246 (450)
-+|+.+.|+||.+ ..+..+++ ......++.-++..||+++..+.+. .++..+-.+ +--....||||
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~-~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l-----g~d~~~~GNHE 734 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIK-EVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM-----GYDASTFGNHE 734 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHH-HHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc-----CCCEEEecccc
Confidence 3578899999985 44455555 3222222332344899999876542 344444333 23355889999
Q ss_pred c
Q 013080 247 T 247 (450)
Q Consensus 247 ~ 247 (450)
.
T Consensus 735 f 735 (1163)
T PRK09419 735 F 735 (1163)
T ss_pred c
Confidence 6
No 109
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=82.40 E-value=1.8 Score=43.51 Aligned_cols=68 Identities=19% Similarity=0.122 Sum_probs=37.6
Q ss_pred ceEEEecCcCcHH----------------HHHHHHHHhcCCCCCCceEEEeccccccCCchH-------HHHHHHHHhhh
Q 013080 176 EVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------EVLLVLLAWKV 232 (450)
Q Consensus 176 ~i~ViGDIHG~~~----------------dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl-------Evl~lL~~Lk~ 232 (450)
+|+-+.|+||++. .+.+.+++......++.-++..||+++.-+.+- -++.++-.+
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-- 84 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-- 84 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc--
Confidence 5788899999863 222223212222223334667999987654331 123333333
Q ss_pred cCCCcEEEeccccccc
Q 013080 233 LMPHRVYLLRGNHETK 248 (450)
Q Consensus 233 ~~P~~v~lLRGNHE~~ 248 (450)
+-=.+..||||..
T Consensus 85 ---gyDa~tlGNHEFd 97 (282)
T cd07407 85 ---PYDLLTIGNHELY 97 (282)
T ss_pred ---CCcEEeecccccC
Confidence 2446778999984
No 110
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=80.29 E-value=3.4 Score=40.54 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=35.6
Q ss_pred CcHHHHHHHHHHhcCCCCCCceEEEeccccccCCch-----HHHHHHHHHhhhcCCCcEEEecccccc
Q 013080 185 GQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPHRVYLLRGNHET 247 (450)
Q Consensus 185 G~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~s-----lEvl~lL~~Lk~~~P~~v~lLRGNHE~ 247 (450)
|-+.-+..+++ .......+.-++..||+++.++.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~-~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRK-QLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHH-HHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 45677777777 433333344588899999887532 34455444442 23556899996
No 111
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=80.07 E-value=4.1 Score=40.39 Aligned_cols=68 Identities=21% Similarity=0.304 Sum_probs=44.3
Q ss_pred ceEEEecCcCcHH--HHHHHHHHhcCCCCCCceEEEeccccccC-CchHHHHHHHHHhhhcCCCcEEEecccccccc
Q 013080 176 EVIVVGDILGQFH--DLVALFEENAGFPSDHRYFVFNGNYVDKG-SWGLEVLLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 176 ~i~ViGDIHG~~~--dL~~il~~~~g~~~~~~~~vFLGDyVDRG-~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
+|.++|||=|.-- .+...+. ........+-+|-+||..--| .-+-++...|..+.. .+..+ ||||...
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~-~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD~ 71 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLP-KLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWDK 71 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHH-HHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccCc
Confidence 5789999999864 3455555 332222334467799998766 367778877776643 44444 9998643
No 112
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=77.90 E-value=2.9 Score=41.85 Aligned_cols=67 Identities=13% Similarity=0.066 Sum_probs=36.0
Q ss_pred ceEEEecCcCcHHH----------HHHHHHHhcCC----CCCCceEEEeccccccCCch-----HHHHHHHHHhhhcCCC
Q 013080 176 EVIVVGDILGQFHD----------LVALFEENAGF----PSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPH 236 (450)
Q Consensus 176 ~i~ViGDIHG~~~d----------L~~il~~~~g~----~~~~~~~vFLGDyVDRG~~s-----lEvl~lL~~Lk~~~P~ 236 (450)
.|+-+.|+||++.. +..+++ .... ...+.-++-.||.+...+.+ .-++..+-++..
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~-~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~---- 76 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVD-GVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY---- 76 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHH-HHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----
Confidence 36788999998633 444554 2211 12334467799998433322 223333433322
Q ss_pred cEEEeccccccc
Q 013080 237 RVYLLRGNHETK 248 (450)
Q Consensus 237 ~v~lLRGNHE~~ 248 (450)
.+. ..||||.-
T Consensus 77 Da~-~~GNHEfD 87 (285)
T cd07405 77 DAM-AVGNHEFD 87 (285)
T ss_pred cEE-eecccccc
Confidence 333 44999964
No 113
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=76.81 E-value=1.7 Score=46.16 Aligned_cols=42 Identities=19% Similarity=0.316 Sum_probs=34.9
Q ss_pred ceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccc
Q 013080 205 RYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCT 251 (450)
Q Consensus 205 ~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~ 251 (450)
+++=.+||+-||||++-.++..|..+ + .+-+-.||||-..|.
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~y----h-svDiQWGNHDilWmg 233 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINY----H-SVDIQWGNHDILWMG 233 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhc----c-cccccccCcceEEee
Confidence 34778999999999999999988754 3 777889999987753
No 114
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=72.23 E-value=5.8 Score=44.55 Aligned_cols=66 Identities=20% Similarity=0.220 Sum_probs=41.2
Q ss_pred ceEEEecCcCcHHH----------------HHHHHHHhcCCCCCCceEEEeccccccCCchH-------------HHHHH
Q 013080 176 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------------EVLLV 226 (450)
Q Consensus 176 ~i~ViGDIHG~~~d----------------L~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl-------------Evl~l 226 (450)
+|+-..|+||++.. +..+++ .......+..+|-.||++...+.+- -++..
T Consensus 27 ~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~-~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~a 105 (649)
T PRK09420 27 RIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIK-AARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKA 105 (649)
T ss_pred EEEEEcccccCccCCccccCCcccccCHHHHHHHHH-HHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHH
Confidence 58889999999742 344454 3322223445788999998666431 24444
Q ss_pred HHHhhhcCCCcEEEecccccc
Q 013080 227 LLAWKVLMPHRVYLLRGNHET 247 (450)
Q Consensus 227 L~~Lk~~~P~~v~lLRGNHE~ 247 (450)
+-.|. --....||||.
T Consensus 106 mN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 106 MNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHhcC-----CcEEeccchhh
Confidence 44442 34677899995
No 115
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=71.80 E-value=8.9 Score=36.04 Aligned_cols=72 Identities=13% Similarity=0.198 Sum_probs=36.5
Q ss_pred eEEEecCcCc-----HHHHHHHHHHhcC-CCCCCceEEEeccccccCCchH-------------HHHHHHHHhhhc--CC
Q 013080 177 VIVVGDILGQ-----FHDLVALFEENAG-FPSDHRYFVFNGNYVDKGSWGL-------------EVLLVLLAWKVL--MP 235 (450)
Q Consensus 177 i~ViGDIHG~-----~~dL~~il~~~~g-~~~~~~~~vFLGDyVDRG~~sl-------------Evl~lL~~Lk~~--~P 235 (450)
|+|++|+|=. ++.|..+|. ... .... ..+|++|+++|.-.... +-+..+...... .-
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~-~~~~~~~p-~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 78 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLS-GVEDASKP-DVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPS 78 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHH-CCCHCTTE-CEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCC
T ss_pred CEEEecCccCCCHhHHHHHHHHHH-hccccCCC-cEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccc
Confidence 4677777644 566777777 444 2223 34999999999632221 111112111111 22
Q ss_pred CcEEEeccccccccc
Q 013080 236 HRVYLLRGNHETKNC 250 (450)
Q Consensus 236 ~~v~lLRGNHE~~~~ 250 (450)
-+|+++.|+||-...
T Consensus 79 ~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 79 TQVVLVPGPNDPTSS 93 (209)
T ss_dssp SEEEEE--TTCTT-S
T ss_pred cEEEEeCCCcccccc
Confidence 589999999997654
No 116
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=71.31 E-value=6.8 Score=39.89 Aligned_cols=65 Identities=22% Similarity=0.220 Sum_probs=38.4
Q ss_pred eEEEecCcCcHH------HHHHHHHHhcCCC----CCCceEEEeccccccCCc-------------hHHHHHHHHHhhhc
Q 013080 177 VIVVGDILGQFH------DLVALFEENAGFP----SDHRYFVFNGNYVDKGSW-------------GLEVLLVLLAWKVL 233 (450)
Q Consensus 177 i~ViGDIHG~~~------dL~~il~~~~g~~----~~~~~~vFLGDyVDRG~~-------------slEvl~lL~~Lk~~ 233 (450)
|+-+-|+||++. .+..+++ ..... .++.-++..||.+.-++. +.-++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~-~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVN-ALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHH-HHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 566789999953 4444454 22111 223457889999876543 233444554443
Q ss_pred CCCcEEEecccccc
Q 013080 234 MPHRVYLLRGNHET 247 (450)
Q Consensus 234 ~P~~v~lLRGNHE~ 247 (450)
-=.+..||||.
T Consensus 80 ---~Da~tlGNHEF 90 (313)
T cd08162 80 ---VQAIALGNHEF 90 (313)
T ss_pred ---CcEEecccccc
Confidence 33567899995
No 117
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=68.45 E-value=7.3 Score=43.52 Aligned_cols=66 Identities=21% Similarity=0.214 Sum_probs=39.7
Q ss_pred ceEEEecCcCcHHH----------------HHHHHHHhcCCCCCCceEEEeccccccCCchH-------------HHHHH
Q 013080 176 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL-------------EVLLV 226 (450)
Q Consensus 176 ~i~ViGDIHG~~~d----------------L~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl-------------Evl~l 226 (450)
+|+-..|+||++.. +..+++ .......+..+|-.||.+...+.+- -++..
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~-~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIK-QARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHH-HHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 57888999999742 344554 3322223445778999998655431 23444
Q ss_pred HHHhhhcCCCcEEEecccccc
Q 013080 227 LLAWKVLMPHRVYLLRGNHET 247 (450)
Q Consensus 227 L~~Lk~~~P~~v~lLRGNHE~ 247 (450)
+-.|. -=....||||.
T Consensus 83 mN~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEF 98 (626)
T ss_pred HhhcC-----ccEEecccccc
Confidence 43332 33567899995
No 118
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=65.83 E-value=8 Score=41.95 Aligned_cols=68 Identities=16% Similarity=0.244 Sum_probs=41.6
Q ss_pred ceEEEecCcCcHH---------------HHHHHHHHhcCCCCCCceEEEeccccccCCc------hHHHHHHHHHhhhcC
Q 013080 176 EVIVVGDILGQFH---------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSW------GLEVLLVLLAWKVLM 234 (450)
Q Consensus 176 ~i~ViGDIHG~~~---------------dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~------slEvl~lL~~Lk~~~ 234 (450)
+|+-..|+||.+. .+..+.+ .......+..+|=.||+++..+- ...++.++-.++
T Consensus 28 ~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~-~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~--- 103 (517)
T COG0737 28 TILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVK-QLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG--- 103 (517)
T ss_pred EEEEeccccccceeccccccCcccccHHHHHHHHH-HHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC---
Confidence 4788899999998 3333343 22222223446669999998443 334555555553
Q ss_pred CCcEEEecccccccc
Q 013080 235 PHRVYLLRGNHETKN 249 (450)
Q Consensus 235 P~~v~lLRGNHE~~~ 249 (450)
-=.+..||||.-.
T Consensus 104 --yDa~tiGNHEFd~ 116 (517)
T COG0737 104 --YDAMTLGNHEFDY 116 (517)
T ss_pred --CcEEeeccccccc
Confidence 2356779999754
No 119
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=65.55 E-value=8.2 Score=46.27 Aligned_cols=66 Identities=21% Similarity=0.292 Sum_probs=38.1
Q ss_pred ceEEEecCcCcHH----------------HHHHHHHHhcCCCCCCceEEEeccccccCCch--------------HHHHH
Q 013080 176 EVIVVGDILGQFH----------------DLVALFEENAGFPSDHRYFVFNGNYVDKGSWG--------------LEVLL 225 (450)
Q Consensus 176 ~i~ViGDIHG~~~----------------dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~s--------------lEvl~ 225 (450)
+|+-+.|+||++. .+..+++ .......+.-+|-.||.+...+.+ .-++.
T Consensus 43 ~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~-~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 43 QILATTDLHGNFMDYDYASDKETTGFGLAQTATLIK-KARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEecccccccccccccCCCCCCcCHHHHHHHHH-HHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 5888999999863 3344555 332222333344599999866521 12333
Q ss_pred HHHHhhhcCCCcEEEecccccc
Q 013080 226 VLLAWKVLMPHRVYLLRGNHET 247 (450)
Q Consensus 226 lL~~Lk~~~P~~v~lLRGNHE~ 247 (450)
.+-.+ +--....||||.
T Consensus 122 ~mN~l-----gyDa~~lGNHEF 138 (1163)
T PRK09419 122 AMNAL-----GYDAGTLGNHEF 138 (1163)
T ss_pred HHhhc-----CccEEeeccccc
Confidence 33333 234566899996
No 120
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=65.25 E-value=12 Score=38.78 Aligned_cols=44 Identities=18% Similarity=0.165 Sum_probs=27.7
Q ss_pred ceEEEeccccccCCc---hHHHHHHHHHhhhcCCCcEEEecccccccc
Q 013080 205 RYFVFNGNYVDKGSW---GLEVLLVLLAWKVLMPHRVYLLRGNHETKN 249 (450)
Q Consensus 205 ~~~vFLGDyVDRG~~---slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~ 249 (450)
+-+||+||.|+. .. ...+++...+-.+.+.=-...+.||||...
T Consensus 102 DlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 102 DLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred CEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 449999999986 32 233444444433333334668899999865
No 121
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=62.73 E-value=12 Score=43.26 Aligned_cols=66 Identities=21% Similarity=0.192 Sum_probs=39.9
Q ss_pred ceEEEecCcCcHHH----------------HHHHHHHhcCCCCCCceEEEeccccccCCchH--------------HHHH
Q 013080 176 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWGL--------------EVLL 225 (450)
Q Consensus 176 ~i~ViGDIHG~~~d----------------L~~il~~~~g~~~~~~~~vFLGDyVDRG~~sl--------------Evl~ 225 (450)
+|+-..|+||++.. +..+++ .......+..+|-.||++..-+.+- -++.
T Consensus 117 tIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~-~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 117 RILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIE-EAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEeecCCcccccccccCccccccHHHHHHHHH-HHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 57889999999642 333444 3322223445788999997654421 2445
Q ss_pred HHHHhhhcCCCcEEEecccccc
Q 013080 226 VLLAWKVLMPHRVYLLRGNHET 247 (450)
Q Consensus 226 lL~~Lk~~~P~~v~lLRGNHE~ 247 (450)
.+-.|. --....||||.
T Consensus 196 amN~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEF 212 (814)
T ss_pred HHhccC-----CCEEEechhhc
Confidence 444442 34577899995
No 122
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=62.07 E-value=12 Score=40.98 Aligned_cols=53 Identities=17% Similarity=0.076 Sum_probs=29.1
Q ss_pred HHHHHHHhcCCCCCCceEEEeccccccCCch-----HHHHHHHHHhhhcCCCcEEEeccccccc
Q 013080 190 LVALFEENAGFPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPHRVYLLRGNHETK 248 (450)
Q Consensus 190 L~~il~~~~g~~~~~~~~vFLGDyVDRG~~s-----lEvl~lL~~Lk~~~P~~v~lLRGNHE~~ 248 (450)
|..+++ .......+.-++..||.+...+.+ ...+.++-++ +--....||||.-
T Consensus 37 l~~~i~-~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~-----g~Da~~lGNHEFd 94 (550)
T TIGR01530 37 LNAEIN-KLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA-----GFDFFTLGNHEFD 94 (550)
T ss_pred HHHHHH-HHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc-----CCCEEEecccccc
Confidence 444444 322222344577899998765443 2233433333 3456778999963
No 123
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=56.15 E-value=35 Score=34.56 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=47.7
Q ss_pred CCceEEEecCc----CcHHHHHHHHHHhc-CC-CCC--CceEEEeccccccC----Cch----HHHHHHHHHh-hhcCC-
Q 013080 174 DSEVIVVGDIL----GQFHDLVALFEENA-GF-PSD--HRYFVFNGNYVDKG----SWG----LEVLLVLLAW-KVLMP- 235 (450)
Q Consensus 174 ~~~i~ViGDIH----G~~~dL~~il~~~~-g~-~~~--~~~~vFLGDyVDRG----~~s----lEvl~lL~~L-k~~~P- 235 (450)
...++|+||+| -.++.|.++|+ .. .. +.. ...+||.|+++-+. ..+ .|-+.-|..+ ...||
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~-~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~ 105 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLS-LYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKL 105 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHH-HhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChH
Confidence 35789999998 56777888888 33 21 211 23589999998652 222 2344444432 23445
Q ss_pred ----CcEEEeccccccc
Q 013080 236 ----HRVYLLRGNHETK 248 (450)
Q Consensus 236 ----~~v~lLRGNHE~~ 248 (450)
.++++++|-.|-.
T Consensus 106 L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 106 ILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHhcCeEEEECCCCCCC
Confidence 6899999999963
No 124
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=53.73 E-value=22 Score=35.72 Aligned_cols=67 Identities=18% Similarity=0.238 Sum_probs=42.4
Q ss_pred CCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCC-CcEEEecccccccc
Q 013080 173 EDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMP-HRVYLLRGNHETKN 249 (450)
Q Consensus 173 ~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P-~~v~lLRGNHE~~~ 249 (450)
...+.+.|+|.|+...+ +...|+ .+.++-+||+-.-|. +-||+.+=-.+ -..| .+=+.++||||.-+
T Consensus 60 ~~~r~VcisdtH~~~~~-------i~~~p~-gDvlihagdfT~~g~-~~ev~~fn~~~-gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD-------INDIPD-GDVLIHAGDFTNLGL-PEEVIKFNEWL-GSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred CceEEEEecCcccccCc-------cccCCC-CceEEeccCCccccC-HHHHHhhhHHh-ccCcceeeEEEeeccceee
Confidence 45689999999987544 332343 444899999987664 33554432222 1223 34568999999865
No 125
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=52.41 E-value=22 Score=39.02 Aligned_cols=67 Identities=13% Similarity=0.076 Sum_probs=36.1
Q ss_pred ceEEEecCcCcHH----------HHHHHHHHhcC----CCCCCceEEEeccccccCCch-----HHHHHHHHHhhhcCCC
Q 013080 176 EVIVVGDILGQFH----------DLVALFEENAG----FPSDHRYFVFNGNYVDKGSWG-----LEVLLVLLAWKVLMPH 236 (450)
Q Consensus 176 ~i~ViGDIHG~~~----------dL~~il~~~~g----~~~~~~~~vFLGDyVDRG~~s-----lEvl~lL~~Lk~~~P~ 236 (450)
.|+-+.|+||++. .+..+++ ... ....+.-+|..||++...+.+ .-++.++-.+. -
T Consensus 36 til~tnD~Hg~~~~~~~~~~G~a~~a~~i~-~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~ 110 (551)
T PRK09558 36 TILHTNDHHGHFWRNEYGEYGLAAQKTLVD-QIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----Y 110 (551)
T ss_pred EEEEecccCCCccccccCCccHHHHHHHHH-HHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----C
Confidence 4788999999874 2233443 221 112234477799998643322 12233333332 1
Q ss_pred cEEEeccccccc
Q 013080 237 RVYLLRGNHETK 248 (450)
Q Consensus 237 ~v~lLRGNHE~~ 248 (450)
.+.. .||||.-
T Consensus 111 Da~t-lGNHEFD 121 (551)
T PRK09558 111 DAMA-VGNHEFD 121 (551)
T ss_pred CEEc-ccccccC
Confidence 3444 4999964
No 126
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=49.15 E-value=31 Score=36.45 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=40.5
Q ss_pred CceEEEecCc-CcHHHH--HHHHHHhcCCCCCCceEEEeccccccCCchHH------HHHHHHHhhh-cCCCcEEEeccc
Q 013080 175 SEVIVVGDIL-GQFHDL--VALFEENAGFPSDHRYFVFNGNYVDKGSWGLE------VLLVLLAWKV-LMPHRVYLLRGN 244 (450)
Q Consensus 175 ~~i~ViGDIH-G~~~dL--~~il~~~~g~~~~~~~~vFLGDyVDRG~~slE------vl~lL~~Lk~-~~P~~v~lLRGN 244 (450)
-+++++||-= |..... .+.+. ..+....-+-+|-+||-++-|..|+. ...-++.-.. ...--++++.||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~-~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGN 105 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLK-QYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQ 105 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHH-HHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCc
Confidence 3689999963 333221 22233 22222233448889998888887653 3333331110 001258999999
Q ss_pred cccc
Q 013080 245 HETK 248 (450)
Q Consensus 245 HE~~ 248 (450)
||..
T Consensus 106 HDy~ 109 (394)
T PTZ00422 106 ADWD 109 (394)
T ss_pred cccc
Confidence 9973
No 127
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=48.96 E-value=57 Score=31.07 Aligned_cols=87 Identities=22% Similarity=0.246 Sum_probs=63.5
Q ss_pred ceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccccccccccccCchH----------------HHHHHhCCcc
Q 013080 205 RYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNHETKNCTLAYGFWA----------------ELCTKFGKKD 268 (450)
Q Consensus 205 ~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNHE~~~~~~~ygf~~----------------e~~~ky~~~~ 268 (450)
..+||+| -|-+.-|.+.+|-+++.+|-.+.++ .|+-|.|..++...|.. |+...|-.
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~lt-- 112 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLT-- 112 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhh--
Confidence 4589987 5889999999999999998877666 89999988664433332 23333333
Q ss_pred hhHHHHHHHHHhhcCCcceeeeceEEEEec-CC
Q 013080 269 CKLVFDKCLECFRTLPLATIIAQGVYTTHG-GL 300 (450)
Q Consensus 269 ~~~l~~~~~~~f~~LPlaaii~~~il~vHG-Gi 300 (450)
.+|..+...+-++++...+-.+++.+.| |-
T Consensus 113 --Sv~Tti~all~s~~lv~RirPdlil~NGPGT 143 (211)
T KOG3339|consen 113 --SVFTTIWALLQSFVLVWRIRPDLILCNGPGT 143 (211)
T ss_pred --hHHHHHHHHHHHheEEEecCCCEEEECCCCc
Confidence 3777788888888888777777777777 53
No 128
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=48.36 E-value=28 Score=40.10 Aligned_cols=66 Identities=17% Similarity=0.199 Sum_probs=38.9
Q ss_pred ceEEEecCcCcHHH----------------HHHHHHHhcCCCCCCceEEEeccccccCCch-------------------
Q 013080 176 EVIVVGDILGQFHD----------------LVALFEENAGFPSDHRYFVFNGNYVDKGSWG------------------- 220 (450)
Q Consensus 176 ~i~ViGDIHG~~~d----------------L~~il~~~~g~~~~~~~~vFLGDyVDRG~~s------------------- 220 (450)
+|+-..|+||++.. +..+++ .......+..+|-.||++-.-+.+
T Consensus 41 ~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~-~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~~ 119 (780)
T PRK09418 41 RILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVN-KAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSYT 119 (780)
T ss_pred EEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHH-HHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccccc
Confidence 58889999999632 334444 332222344578899988543332
Q ss_pred HHHHHHHHHhhhcCCCcEEEecccccc
Q 013080 221 LEVLLVLLAWKVLMPHRVYLLRGNHET 247 (450)
Q Consensus 221 lEvl~lL~~Lk~~~P~~v~lLRGNHE~ 247 (450)
.-++.++-.|. -=....||||.
T Consensus 120 ~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 120 HPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred hHHHHHHhccC-----CCEEecccccc
Confidence 12444444442 34567899994
No 129
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=46.37 E-value=73 Score=31.68 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=40.3
Q ss_pred eEEEecCc-CcH----HHHHHHHHHhcCCCC---------CCceEEEeccccccCCc------------------hHHHH
Q 013080 177 VIVVGDIL-GQF----HDLVALFEENAGFPS---------DHRYFVFNGNYVDKGSW------------------GLEVL 224 (450)
Q Consensus 177 i~ViGDIH-G~~----~dL~~il~~~~g~~~---------~~~~~vFLGDyVDRG~~------------------slEvl 224 (450)
|.+|+||| |.- ..|..+.+.+.|... .-.++|..||.|+.-.. ..+.+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 56788888 322 333333332344321 11359999999985432 22333
Q ss_pred HHHHHhhhcCC--CcEEEecccccccccc
Q 013080 225 LVLLAWKVLMP--HRVYLLRGNHETKNCT 251 (450)
Q Consensus 225 ~lL~~Lk~~~P--~~v~lLRGNHE~~~~~ 251 (450)
..+-.+-..-| =.|.+++||||-....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~ 110 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHS 110 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCccccc
Confidence 33322211122 2588999999986644
No 130
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=46.17 E-value=30 Score=37.15 Aligned_cols=20 Identities=10% Similarity=0.273 Sum_probs=18.4
Q ss_pred hhHHHHHHhcCceEEEeecC
Q 013080 375 DCTEEFLKENHLKLIIRSHE 394 (450)
Q Consensus 375 d~~~~FL~~n~l~~IIRgHe 394 (450)
..++..+-++++++++=||.
T Consensus 322 ~~LE~l~~~~~VDvvf~GHv 341 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHV 341 (452)
T ss_pred HHHHHHHHHhceeEEEeccc
Confidence 36899999999999999998
No 131
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=38.81 E-value=80 Score=34.77 Aligned_cols=54 Identities=15% Similarity=0.156 Sum_probs=38.5
Q ss_pred CceEEEecCc------------CcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHh
Q 013080 175 SEVIVVGDIL------------GQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAW 230 (450)
Q Consensus 175 ~~i~ViGDIH------------G~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~L 230 (450)
.+|.|-.|+| -.|..|..||+ ++.... .+.++.=||++.-..-|-++|...+.+
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~-iA~e~~-VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILE-IAQEND-VDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHH-HHHhcC-CcEEEecCcccccCCccHHHHHHHHHH
Confidence 5788999988 34667888888 665443 444888899998887777776654443
No 132
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=37.41 E-value=33 Score=34.65 Aligned_cols=71 Identities=23% Similarity=0.347 Sum_probs=44.4
Q ss_pred CceEEEecC--cCcHHHHHHHHHH-hcCCCCCCceEEEecccc-ccCCch---------HHHHHHHHHhhhcCCCcEEEe
Q 013080 175 SEVIVVGDI--LGQFHDLVALFEE-NAGFPSDHRYFVFNGNYV-DKGSWG---------LEVLLVLLAWKVLMPHRVYLL 241 (450)
Q Consensus 175 ~~i~ViGDI--HG~~~dL~~il~~-~~g~~~~~~~~vFLGDyV-DRG~~s---------lEvl~lL~~Lk~~~P~~v~lL 241 (450)
-++.||||- +|.|..-...++. .+|..-.-+-+|-+||-+ |-|..+ -|-+..--+|+. -.+.+
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk----pWy~v 119 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK----PWYSV 119 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc----chhhh
Confidence 478999995 8888776555541 233222334478899954 666653 344444444432 46889
Q ss_pred cccccccc
Q 013080 242 RGNHETKN 249 (450)
Q Consensus 242 RGNHE~~~ 249 (450)
.||||.+-
T Consensus 120 lGNHDyrG 127 (336)
T KOG2679|consen 120 LGNHDYRG 127 (336)
T ss_pred ccCccccC
Confidence 99999863
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=35.78 E-value=1e+02 Score=24.80 Aligned_cols=70 Identities=19% Similarity=0.103 Sum_probs=47.2
Q ss_pred ceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHHHHHhhhcCCCcEEEecccc
Q 013080 176 EVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLVLLAWKVLMPHRVYLLRGNH 245 (450)
Q Consensus 176 ~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~lL~~Lk~~~P~~v~lLRGNH 245 (450)
.+.|+=|---+.+.+..+++..-...+..+.++.+|+.-|+|..+.+....+-.+...+.+.+++...|+
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 5678888777888888888732233345666899999999888888866666666656666766665554
No 134
>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees; within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. ; GO: 0005515 protein binding; PDB: 3SF4_C 2LNI_A 1ELW_A 2C0M_A 1FCH_B 3R9A_B 2J9Q_A 2C0L_A 1KT1_A 3FWV_A ....
Probab=32.45 E-value=27 Score=22.47 Aligned_cols=22 Identities=9% Similarity=0.403 Sum_probs=18.8
Q ss_pred cchhHHHhhhHHHHHHHHHHhh
Q 013080 13 KNSFYRMICNFLQVAVAKQVID 34 (450)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~ 34 (450)
+++||+++-.+++++....+++
T Consensus 1 a~~~~~~g~~~~~~~~~~~A~~ 22 (34)
T PF00515_consen 1 AEAYYNLGNAYFQLGDYEEALE 22 (34)
T ss_dssp HHHHHHHHHHHHHTT-HHHHHH
T ss_pred CHHHHHHHHHHHHhCCchHHHH
Confidence 4689999999999999999988
No 135
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=27.97 E-value=2e+02 Score=28.57 Aligned_cols=122 Identities=22% Similarity=0.327 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHhCCCeeeeccCCCCceEEEecCcCcHHHHHHHHHHhcCCCCCCceEEEeccccccCCchHHHHHH
Q 013080 147 TVVKKLISAASKIMREERNCVKLRVREDSEVIVVGDILGQFHDLVALFEENAGFPSDHRYFVFNGNYVDKGSWGLEVLLV 226 (450)
Q Consensus 147 ~~~~~Ll~~a~~il~~ep~lv~i~~~~~~~i~ViGDIHG~~~dL~~il~~~~g~~~~~~~~vFLGDyVDRG~~slEvl~l 226 (450)
..+..|+..---+|.+...-+-+.-..-.|.++.||--|+... .|| | | + =+|.+
T Consensus 58 ~~~~~~ln~rdmiln~lh~hvflk~daitpciflgdhtgdrfs--ti~----g------------d------~--yiltl 111 (318)
T PF13258_consen 58 KTLYSLLNTRDMILNELHQHVFLKDDAITPCIFLGDHTGDRFS--TIF----G------------D------Q--YILTL 111 (318)
T ss_pred HHHHHHhhHhHHHHHhhhheEEecCCCcccceeecCcccchhh--hhc----c------------h------H--HHHHH
Confidence 4555666666666666555555543333566777776665211 111 1 0 0 12333
Q ss_pred HHHhhhc-------CCCcEEEecccccccccccccCchHHHHHHhCCcchhHHHHHHHHHhhcCCcceeee-ceEEEEec
Q 013080 227 LLAWKVL-------MPHRVYLLRGNHETKNCTLAYGFWAELCTKFGKKDCKLVFDKCLECFRTLPLATIIA-QGVYTTHG 298 (450)
Q Consensus 227 L~~Lk~~-------~P~~v~lLRGNHE~~~~~~~ygf~~e~~~ky~~~~~~~l~~~~~~~f~~LPlaaii~-~~il~vHG 298 (450)
|-++.-. -..+|++|-||||.-. |..| ..-..+.... ...-| .....+|.+.--. .+++..|-
T Consensus 112 lnsm~nme~nkdsrinknvvvlagnhein~-ngny---~arlanhkls-~gDTY----nlIKtldVC~YD~erkvltsHH 182 (318)
T PF13258_consen 112 LNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNY---MARLANHKLS-AGDTY----NLIKTLDVCNYDPERKVLTSHH 182 (318)
T ss_pred HHHHHhcccccccccccceEEEecCceecc-CchH---HHHHhhCCCC-ccchh----hccccccccccCcchhhhhccc
Confidence 3333221 2358999999999753 3222 1111111111 11122 3345566643322 47888899
Q ss_pred CCCCC
Q 013080 299 GLFRR 303 (450)
Q Consensus 299 Gi~~~ 303 (450)
||-+.
T Consensus 183 GIird 187 (318)
T PF13258_consen 183 GIIRD 187 (318)
T ss_pred Cceec
Confidence 98543
No 136
>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. This repeat includes outlying Tetratricopeptide-like repeats (TPR) that are not matched by IPR001440 from INTERPRO.; PDB: 1XNF_B 3Q15_A 4ABN_A 1OUV_A 3U4T_A 3MA5_C 2KCV_A 2KCL_A 2XEV_A 3NF1_A ....
Probab=24.18 E-value=46 Score=21.02 Aligned_cols=22 Identities=14% Similarity=0.338 Sum_probs=17.5
Q ss_pred cchhHHHhhhHHHHHHHHHHhh
Q 013080 13 KNSFYRMICNFLQVAVAKQVID 34 (450)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~ 34 (450)
++.+|.++..++.++..+++++
T Consensus 1 a~~~~~lg~~~~~~~~~~~A~~ 22 (34)
T PF07719_consen 1 AEAWYYLGQAYYQLGNYEEAIE 22 (34)
T ss_dssp HHHHHHHHHHHHHTT-HHHHHH
T ss_pred CHHHHHHHHHHHHhCCHHHHHH
Confidence 3568889999999999988877
No 137
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=21.95 E-value=78 Score=35.38 Aligned_cols=56 Identities=23% Similarity=0.359 Sum_probs=37.2
Q ss_pred ChhhHHHHHHhcCce----EEEeecCCCCCCCCCCccccccCCceecccCCCCeEEEE---ecCCCcccccCccee
Q 013080 373 GPDCTEEFLKENHLK----LIIRSHEGPDARTGADDARNMLNGYSKDHDTVSGELYTL---FTAPNYPQVQILLGC 441 (450)
Q Consensus 373 G~d~~~~FL~~n~l~----~IIRgHe~~~~~~~r~~~~~v~~Gy~~~h~~~~gk~iTV---FSA~nY~~~~~~~g~ 441 (450)
.++..+..|+.+|++ .||-||.++- +.+|=+.- -++||++.| ||.. |-..+.-+|-
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk----------~k~GEsPI--Ka~Gkl~VIDGGfskA-Yqk~TGIAGY 569 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVK----------VKKGESPI--KANGKLIVIDGGFSKA-YQKTTGIAGY 569 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccc----------cCCCCCCc--cCCCEEEEEcChhhhh-hccccCccce
Confidence 467889999999997 9999999752 34554332 246888877 5554 4333333333
Done!