BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013083
(450 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54DY9|BCS1B_DICDI Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum
GN=bcsl1b PE=3 SV=1
Length = 458
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 145/278 (52%), Gaps = 31/278 (11%)
Query: 169 HVLEKAKAIKEENHMVKLHTVEYGCWDANDMVLKHPMN---FNTLALDSELKKAIMEDLD 225
+++E+AK + E K T+ Y + HP +++ LD + I++D+
Sbjct: 167 NLIEEAKEMALEKEEGK--TLIYTSMGTDWRRFGHPRRKRPISSVILDKGKSELIIQDVK 224
Query: 226 NFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTDVQ-SNSDL 284
F+N ++Y G ++RGYLLYGPPGTGKSS I A+A L+ I L+L S++ L
Sbjct: 225 KFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSL 284
Query: 285 RSLLLSMPSRSMLVIEDIDCSITLENRD--SKDQAGH--------------------NQG 322
LL + P RS++++EDID +I N D +K + + + G
Sbjct: 285 NQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSVSSG 344
Query: 323 DNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVF 382
+ +T SGLLN +DG+ SEGRI+ TTNH EKLD L+RPGR+D+ I + C++
Sbjct: 345 GSALTFSGLLNALDGV--AASEGRILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSYQM 402
Query: 383 EQLAFNYLGISHHHLFEQIEEMLMKVNVTPAEVAGELM 420
EQ+ + + L +Q E L +PA++ M
Sbjct: 403 EQMFLKFYP-TDFDLAKQFVEKLENYKFSPAQLQAYFM 439
>sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
Length = 449
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 179/350 (51%), Gaps = 23/350 (6%)
Query: 83 SAQRFQVMKSEKEKRIGTTLNRNEEIVDVFGDLKLKWKFVCKQVQATKNRNLLQQDNNAR 142
S ++ ++ ++ +EK NR +V G +K+K QV+ ++ N LQ
Sbjct: 91 SNRQLKMPQNAREKPDKQVANRIFSLVPGPGKHYIKYKKCWIQVERERS-NRLQDLTTGT 149
Query: 143 LRSEVRHYELSFHRKQKDVVLNLYLPHVLEKAKAIKEENHMVKLHTVEYGCWDANDMVLK 202
+ LS R ++ +LE K ++ K T Y W
Sbjct: 150 PWETITLTTLSRDR-------GIFSELLLEAQKFMQSAQ---KNKTTIYTAWATEWKPFG 199
Query: 203 HPMN---FNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLI 259
HP + +++ L+S +KK I +D+ +F+ ++Y G ++RGYLLYGPPG+GK+S +
Sbjct: 200 HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFL 259
Query: 260 AAMANHLKFDIYDLDLTDVQSNSD-LRSLLLSMPSRSMLVIEDIDCSITLENRDSKDQAG 318
A+A L +DI L+L + D L LL ++P ++++++ED+D + + R+ + G
Sbjct: 260 YALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSA--FQGRERSGEVG 317
Query: 319 HNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCT 378
+ VT SGLLN +DG+ S S+ RII TTNH EKLDPAL+RPGR+D+ ++ T
Sbjct: 318 FHA---NVTFSGLLNALDGVTS--SDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNAT 372
Query: 379 ASVFEQLAFNYLGISHHHLFEQIEEMLMKVNVTPAEVAGELMKSKCKYAE 428
++ + G S + + + +++ N + A + G + +K A+
Sbjct: 373 PEQVREMFTRFYGHS-PEMADDLSDIVCPKNTSMASLQGLFVMNKSSPAD 421
>sp|Q9Y276|BCS1_HUMAN Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1
Length = 419
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 140/264 (53%), Gaps = 17/264 (6%)
Query: 169 HVLEKAK--AIKEENHMVKLHTVEYGCWDANDMVLKHPMNFNTLALDSELKKAIMEDLDN 226
++LE+A+ A+++E ++T W + N++ L L I+ D+
Sbjct: 149 NILEEARELALQQEEGKTVMYTAVGSEWRPFGYPRRR-RPLNSVVLQQGLADRIVRDVQE 207
Query: 227 FMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDI-YDLDLTDVQSNSDLR 285
F++ ++YT G ++RGYLLYGPPG GKSS I A+A L+ I S+ L
Sbjct: 208 FIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLN 267
Query: 286 SLLLSMPSRSMLVIEDIDCSITLENRDSKDQAGHN----QGDNKVTLSGLLNFIDGLWSC 341
LL P +S++++ED+D + S+D A N QG ++T SGLLN +DG+
Sbjct: 268 HLLSVAPQQSLVLLEDVDAAFL-----SRDLAVENPVKYQGLGRLTFSGLLNALDGV--A 320
Query: 342 CSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVFEQLAFNYLGISHHHLFEQI 401
+E RI+ TTNH ++LDPAL+RPGR+D+ ++ YC+ Q+ + L E
Sbjct: 321 STEARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENF 380
Query: 402 EEMLMKVN--VTPAEVAGELMKSK 423
E +++ ++PA+V G M K
Sbjct: 381 AEHVLRATNQISPAQVQGYFMLYK 404
>sp|Q7ZV60|BCS1_DANRE Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2
Length = 420
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 142/265 (53%), Gaps = 12/265 (4%)
Query: 170 VLEKAK--AIKEENHMVKLHTVEYGCWDANDMVLKHPMNFNTLALDSELKKAIMEDLDNF 227
+L++A+ A+K+E ++T W + +++ L+S + + I++D+ F
Sbjct: 150 ILQEARELALKQEEGRTVMYTAMGAEWRPFGFPRRR-RPLSSVVLESGVAERIVDDVKEF 208
Query: 228 MNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTDVQSNSDLRSL 287
+ ++YT G ++RGYLLYGPPG GKSS I A+A L + I + L+D + D +
Sbjct: 209 IGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDDRLNH 268
Query: 288 LLSM-PSRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKVTLSGLLNFIDGLWSCCSEGR 346
LLS+ P +S++++ED+D + + QG ++T SGLLN +DG+ SE R
Sbjct: 269 LLSVAPQQSIILLEDVDAAFVSRELLPTENPLAYQGMGRLTFSGLLNALDGV--ASSEAR 326
Query: 347 IIIFTTNHKEKLDPALLRPGRMDMHIHMSYCT----ASVFEQLAFNYLGISHHHLFEQIE 402
I+ TTN E+LDPAL+RPGR+D+ ++ +C+ +F + H EQ
Sbjct: 327 IVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHWQLTQMFRRFYPQESAAEADHFSEQ-- 384
Query: 403 EMLMKVNVTPAEVAGELMKSKCKYA 427
+ +++ A+V G M K A
Sbjct: 385 ALAAHTDLSAAQVQGHFMLYKTDPA 409
>sp|Q5E9H5|BCS1_BOVIN Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1
Length = 419
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 17/264 (6%)
Query: 169 HVLEKAK--AIKEENHMVKLHTVEYGCWDANDMVLKHPMNFNTLALDSELKKAIMEDLDN 226
++LE+A+ A+++E ++T W + N++ L+ + + I+ D+
Sbjct: 149 NILEEARELALQQEEGKTVMYTAVGSEWRPFGYPRRR-RPLNSVVLEQGVTERIVRDIRE 207
Query: 227 FMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDI-YDLDLTDVQSNSDLR 285
F++ ++Y G ++RGYLLYGPPG GKSS I A+A L+ I S+ L
Sbjct: 208 FIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRLN 267
Query: 286 SLLLSMPSRSMLVIEDIDCSITLENRDSKDQAGHN----QGDNKVTLSGLLNFIDGLWSC 341
LL P +S++++ED+D + S+D A N QG ++T SGLLN +DG+
Sbjct: 268 HLLSVAPQQSLVLLEDVDAAFL-----SRDLAAENPIKYQGLGRLTFSGLLNALDGV--A 320
Query: 342 CSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVFEQLAFNYLGISHHHLFEQI 401
+E RI+ TTNH ++LDPAL+RPGR+DM ++ +C+ Q+ + L E
Sbjct: 321 STEARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMFQRFYPGQATSLAENF 380
Query: 402 EEMLMKVN--VTPAEVAGELMKSK 423
+ +++ ++PA+V G M K
Sbjct: 381 ADRVLQATTQISPAQVQGYFMLYK 404
>sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2
Length = 456
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 113/182 (62%), Gaps = 8/182 (4%)
Query: 209 TLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKF 268
++ LDS +K+ I++D+ +FM ++Y+ G ++RGYLLYGPPG+GK+S I A+A L +
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 286
Query: 269 DIYDLDLTDVQSNSD-LRSLLLSMPSRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKVT 327
+I L+L++ D L L+ +MP RS+L++EDID + + + Q G + VT
Sbjct: 287 NICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAF-----NKRSQTGEQGFHSSVT 341
Query: 328 LSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVFEQLAF 387
SGLLN +DG+ S SE I TTNH EKLD A++RPGR+D + + T E++
Sbjct: 342 FSGLLNALDGVTS--SEETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPYQVEKMFM 399
Query: 388 NY 389
+
Sbjct: 400 KF 401
>sp|Q9CZP5|BCS1_MOUSE Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1
Length = 418
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 140/265 (52%), Gaps = 19/265 (7%)
Query: 169 HVLEKAKAIKEENHMVKLHTVEYGCWDANDMVLKHPMN---FNTLALDSELKKAIMEDLD 225
++LE+A+A+ + K TV Y + +P +++ L L I++D+
Sbjct: 149 NILEEARALALQQEEGK--TVMYTAVGSEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIR 206
Query: 226 NFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDI-YDLDLTDVQSNSDL 284
F++ ++Y G ++RGYLLYGPPG GKSS I A+A L+ I S+ L
Sbjct: 207 EFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRL 266
Query: 285 RSLLLSMPSRSMLVIEDIDCSITLENRDSKDQAGHN----QGDNKVTLSGLLNFIDGLWS 340
LL P +S++++ED+D + S+D A N QG ++T SGLLN +DG+
Sbjct: 267 NHLLSVAPQQSLVLLEDVDAAFL-----SRDLAVENPIKYQGLGRLTFSGLLNALDGV-- 319
Query: 341 CCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVFEQLAFNYLGISHHHLFEQ 400
+E RI+ TTN+ ++LDPAL+RPGR+D+ ++ YC+ Q+ + L E
Sbjct: 320 ASTEARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAEN 379
Query: 401 IEEMLMKVN--VTPAEVAGELMKSK 423
E ++K ++PA+V G M K
Sbjct: 380 FAEHVLKATSEISPAQVQGYFMLYK 404
>sp|Q7ZTL7|BCS1_XENLA Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1
Length = 419
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 130/230 (56%), Gaps = 10/230 (4%)
Query: 164 NLYLPHVLEKAKAIKEENHMVKLHTVEYGCWDANDMVLKHPMN---FNTLALDSELKKAI 220
N++ ++L++A+ + + + K TV Y A P +++ L+ + + I
Sbjct: 145 NIFF-NILQEARELALKQQVGK--TVMYNAVGAEWRQFGFPRRRRPLSSVVLEQGISEKI 201
Query: 221 MEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDI-YDLDLTDVQ 279
++D+ F+ ++Y+ G ++RGYLLYGPPG GKSS I A+A L++ I
Sbjct: 202 VQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSL 261
Query: 280 SNSDLRSLLLSMPSRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKVTLSGLLNFIDGLW 339
S+ L LL P +S++++ED+D + + + ++ + QG ++T SGLLN +DG+
Sbjct: 262 SDDRLNHLLSVAPQQSIILLEDVDAAFVSRDLNKQNPTAY-QGMGRLTFSGLLNALDGV- 319
Query: 340 SCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVFEQLAFNY 389
+E RI+ TTNH ++LDPAL+RPGR+D+ ++ +CT Q+ +
Sbjct: 320 -ASTEARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHCTNWQLSQMFLRF 368
>sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum
GN=bcs1la PE=3 SV=1
Length = 421
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 129/219 (58%), Gaps = 8/219 (3%)
Query: 207 FNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHL 266
+++ L +LK ++ED+ +F+ + +Y G ++RGYLLYG PG GKSSLI A+A L
Sbjct: 186 LSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGEL 245
Query: 267 KFDIYDLDLT--DVQSNSDLRSLLLSMPSRSMLVIEDIDCSITLENRDSKD-QAGHNQGD 323
DI + L+ D+ + + LL + P +S+L+IEDID + +RD+ D ++ +
Sbjct: 246 NLDICIVSLSSKDID-DKQINHLLNNAPPKSILLIEDIDAAFK-SHRDNVDSNNNNSNNN 303
Query: 324 NKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVFE 383
N +T SGLLN +DG+ EGRI+ TTN E LD AL+R GR+D+ I +S T S
Sbjct: 304 NSLTYSGLLNALDGV--ASQEGRILFMTTNKIELLDSALIREGRIDLKIKVSNATKSQAA 361
Query: 384 QLAFNYLGI-SHHHLFEQIEEMLMKVNVTPAEVAGELMK 421
QL ++ + + + L + E L ++ +++ G L+K
Sbjct: 362 QLFTHFYNLPTDNQLAIRFSENLHDHQLSMSQIQGFLLK 400
>sp|Q5UR45|YL572_MIMIV Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L572 PE=3 SV=1
Length = 196
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 25/157 (15%)
Query: 258 LIAAMANHLKFDIYDLDLTDVQSNSDLRSLLLSMPSR-SMLVIEDIDCSI---------- 306
+I A++ H K I+ L L ++Q +++L +LL ++ + ++LV+EDIDC+
Sbjct: 1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRAKEE 60
Query: 307 ------------TLENRDSKDQAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNH 354
TLEN+ DQ + +K+TLSG+LN +DG+++ SEGRI+I TTNH
Sbjct: 61 ETVVEKVTDDKSTLENKILADQLKKVEKVSKLTLSGILNSLDGIFN--SEGRIVIMTTNH 118
Query: 355 KEKLDPALLRPGRMDMHIHMSYCTASVFEQLAFNYLG 391
E LDPAL+R GR+DM I S C ++ N+ G
Sbjct: 119 SEVLDPALIRRGRIDMQIEFSNCDRYQIAKMYENFYG 155
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 18/177 (10%)
Query: 205 MNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 264
+ F +A E K++++E +D F++ Y +G +G LL GPPGTGK+ L A+A
Sbjct: 163 ITFKDVAGQDEAKESLVEIVD-FLHDTRKYVEIGAKLPKGALLVGPPGTGKTLLAKAVAG 221
Query: 265 HLKFDIYDLDLTDVQSNSDLRSLLLSMPSRSMLVI-----EDIDCSITLENRD----SKD 315
K + + S SD + + M + + + E C + ++ D S+D
Sbjct: 222 EAKVPFFSM------SGSDFVEMFVGMGAARVRDLFKQAEEKAPCIVFIDEIDAIGKSRD 275
Query: 316 QAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
A + + TL+ LL +DG S S+G +I+ TN E LD ALLRPGR D I
Sbjct: 276 GAIQGNDEREQTLNQLLTEMDGFDS--SKGVVILAATNRPEVLDKALLRPGRFDRRI 330
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Query: 205 MNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 264
+ F+ +A E+K+ + E +D F+ + Y +G +G LLYGPPGTGK+ L A+A
Sbjct: 154 VTFDDVAGIDEVKEELAEIVD-FLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAG 212
Query: 265 HLKFDIYDLDLTDV------QSNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDSKDQ 316
+ + +D S +R L S ++ I++ID R +
Sbjct: 213 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDA--VGRQRGAGYG 270
Query: 317 AGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
GH++ + TL+ LL +DG +EG III TN + LDPALLRPGR D I
Sbjct: 271 GGHDEREQ--TLNQLLVEMDGF--SANEGIIIIAATNRPDVLDPALLRPGRFDRQI 322
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 19/200 (9%)
Query: 194 WDANDMVLKHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGT 253
++A D V+ FN +A E KA ++++ +F+ E + ++G +G LL GPPGT
Sbjct: 187 FEATDKVI----TFNDVA-GLEGVKADLQEIVDFLKTPEKFQKLGGQVPKGVLLNGPPGT 241
Query: 254 GKSSLIAAMANHLKFDIYDLDLTD-VQ-----SNSDLRSLLLSMP--SRSMLVIEDIDCS 305
GK+ L A+A + ++ ++ +Q S +R L + S S++ I++ID
Sbjct: 242 GKTLLARAVAGEADVPFFSVNGSEFIQMFVGVGASRVRDLFKTAKEQSPSIIFIDEIDA- 300
Query: 306 ITLENRDSKDQAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRP 365
R + GH++ + TL+ +L +DG + I+I TN + LDPALLRP
Sbjct: 301 -VGRQRGAGLGGGHDEREQ--TLNQILGEMDGFGGA--QAVIVIAATNRPDVLDPALLRP 355
Query: 366 GRMDMHIHMSYCTASVFEQL 385
GR D H+ + T E++
Sbjct: 356 GRFDRHVTVGRPTMKGREEI 375
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 204 PMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMA 263
P F +A E + E +D F+ E Y +G +G LL GPPGTGK+ L A+A
Sbjct: 247 PTTFEDVAGIEEAVDEVREVVD-FLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLAKAIA 305
Query: 264 NHLKFDIYDLDLTDVQ------SNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDSKD 315
+ L +D + +R + +R+ ++ I+++D ++R
Sbjct: 306 GEAGVPFFSLSGSDFVEMFVGVGAARVRDMFTQAVNRAPCIIFIDELDA--LGKSRSGSV 363
Query: 316 QAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
GH++ + TL+ LL +DG S + G I++ TN E LDPALLRPGR D H+
Sbjct: 364 VGGHDEREQ--TLNALLVEMDGFDS--NSGVIVVAATNRPETLDPALLRPGRFDRHV 416
>sp|Q8LQJ8|FTSH5_ORYSJ ATP-dependent zinc metalloprotease FTSH 5, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH5 PE=3 SV=1
Length = 715
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 218 KAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTD 277
KA +E++ +++ + +TR+G +G LL GPPGTGK+ L A+A + ++
Sbjct: 239 KAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSE 298
Query: 278 VQ------SNSDLRSLLLSMPSRSMLVI--EDIDCSITLENRDSKDQAGHNQGDNKVTLS 329
+ +R L + RS +I ++ID +R+ KDQ K+TL+
Sbjct: 299 FEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDA--IGGSRNPKDQQYM-----KMTLN 351
Query: 330 GLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
LL +DG +EG I+I TN E LD AL+RPGR D HI
Sbjct: 352 QLLVELDGFKQ--NEGIIVIAATNFPESLDKALVRPGRFDRHI 392
>sp|B0K657|FTSH2_THEPX ATP-dependent zinc metalloprotease FtsH 2 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH2 PE=3 SV=1
Length = 510
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 226 NFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTDVQSN---- 281
+FM E Y ++G +G L YGPPGTGK+ L A+A ++
Sbjct: 101 DFMTNTEKYNKMGAKIPKGILFYGPPGTGKTLLATALAGETNSTFISASGSEFVEKYVGV 160
Query: 282 --SDLRSLLLSM--PSRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKVTLSGLLNFIDG 337
S +R+L + S++ I++ID T N D N + TL+ LL +DG
Sbjct: 161 GASRIRALFAKAKKSAPSIIFIDEIDAVGTKRNTD-------NNSEKDQTLNQLLVEMDG 213
Query: 338 LWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMS 375
S +EG I+I TN + LD ALLRPGR D IH+
Sbjct: 214 FNS--NEGIIVIGATNRIDMLDEALLRPGRFDRTIHIG 249
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 211 ALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDI 270
LD ++++ I E ++ + E + +VG +G LLYGPPGTGK+ L A+ANH
Sbjct: 183 GLDEQIRE-IREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATF 241
Query: 271 YDLDLTDV------QSNSDLRSL--LLSMPSRSMLVIEDIDCSITLENRDSKDQAGHNQG 322
L ++ + +R L L + S++ I++ID RD+ G
Sbjct: 242 IRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDA------TSG 295
Query: 323 DNKV--TLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMS 375
D +V TL+ LL +DG + +I TN K+ LDPALLRPGR D HI +
Sbjct: 296 DREVQRTLTQLLAEMDGFDPL--DDIKVIAATNRKDILDPALLRPGRFDRHIKIP 348
>sp|A6TWP7|FTSH2_ALKMQ ATP-dependent zinc metalloprotease FtsH 2 OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ftsH2 PE=3 SV=1
Length = 689
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 17/190 (8%)
Query: 205 MNFNTLA-LDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMA 263
+ F+ +A LD E KA +E+L +F+ + Y +G +G L+ GPPGTGK+ L A+A
Sbjct: 162 ITFDDVAGLDEE--KAEVEELVDFLKNPKKYIELGARIPKGILMIGPPGTGKTYLTKAVA 219
Query: 264 NHLKFDIYDLDLTDV------QSNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDSKD 315
+ + +D S +R L + ++ I++ID R +
Sbjct: 220 GEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKSAPCIIFIDEIDA--VGRKRGAGL 277
Query: 316 QAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMS 375
GH++ + TL+ LL +DG +EG II+ TN + LDPALLRPGR D + +
Sbjct: 278 GGGHDEREQ--TLNQLLVEMDGF--GINEGIIIVAATNRPDILDPALLRPGRFDRQVMVG 333
Query: 376 YCTASVFEQL 385
EQ+
Sbjct: 334 APDIKGREQI 343
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 17/178 (9%)
Query: 211 ALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDI 270
L+S+LK AI E ++ + E + G RG LLYGPPGTGK+ + A+AN + +
Sbjct: 357 GLNSQLK-AIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYV 415
Query: 271 YDLDLTDV------QSNSDLRSLLLSMPSR--SMLVIEDIDCSITLENRDSKDQAGHNQG 322
++ ++ ++ + LR + R S++ I+++D K + ++
Sbjct: 416 SVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALC------PKREGAQSEV 469
Query: 323 DNKVTLSGLLNFIDGLWSCCSEGRIIIF-TTNHKEKLDPALLRPGRMDMHIHMSYCTA 379
+ +V S LL +DG+ S SEGR+++ TN + LD AL RPGR D I + A
Sbjct: 470 EKRVVAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNA 526
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 18/173 (10%)
Query: 234 YTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTDV------QSNSDLRSL 287
+ R+G +G LLYGPPG K+ + A+AN + + ++ +S +R +
Sbjct: 653 FNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREI 712
Query: 288 L--LSMPSRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKVTLSGLLNFIDGLWSCCSEG 345
+ S++ +++D ++ +E R S AG N D L+ LL +DG+ +
Sbjct: 713 FRKARAVAPSIIFFDELD-ALAVE-RGSSSGAG-NVADR--VLAQLLTEMDGIEQL--KN 765
Query: 346 RIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVFEQ---LAFNYLGISHH 395
++ TN +++D AL+RPGR+D I++ A+ + L F+ + IS+
Sbjct: 766 VTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNE 818
>sp|B3R057|FTSH1_PHYMT ATP-dependent zinc metalloprotease FtsH 1 OS=Phytoplasma mali
(strain AT) GN=ftsH1 PE=3 SV=1
Length = 600
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 19/181 (10%)
Query: 202 KHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAA 261
K F +A ++E K+ + E +D F+ + Y +G A +G LL GPPGTGK+ L A
Sbjct: 169 KSLFTFKDVAGNTEEKEEMTELID-FLKQPQKYETIGAAIPKGVLLEGPPGTGKTLLAKA 227
Query: 262 MANHLKFDIYDLDLTDV------QSNSDLRSLL----LSMPSRSMLVIEDIDCSITLENR 311
+A Y + ++ S +R+L L+ P +L I++ID L +
Sbjct: 228 LAGEASVPFYAVSGSEFVEMYVGVGASRVRTLFKEAKLNAP--CVLFIDEIDV---LGGK 282
Query: 312 DSKDQAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMH 371
+ +G NQ ++ TL+ LL +DG ++G I+I TN + LD ALLRPGR D
Sbjct: 283 RGGNSSGGNQEKDQ-TLNQLLTEMDGFTQ--AKGIIVIGATNRADMLDAALLRPGRFDRK 339
Query: 372 I 372
I
Sbjct: 340 I 340
>sp|Q6M2F0|FTSH_CORGL ATP-dependent zinc metalloprotease FtsH OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=ftsH PE=3 SV=1
Length = 853
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 205 MNFNTLALDSELKKAIME--DLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAM 262
M NT A + ++A+ E ++ +F+ Y +G RG LLYGPPGTGK+ L A+
Sbjct: 159 MPTNTFADVAGAEEAVDELHEIKDFLEDPTRYEALGAKIPRGVLLYGPPGTGKTLLARAV 218
Query: 263 ANHLKFDIYDLDLTDV------QSNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDSK 314
A Y + +D S +R L S ++ +++ID R S
Sbjct: 219 AGEAGVPFYSISGSDFVEMFVGVGASRVRDLFKQAKENSPCIIFVDEIDA--VGRARGSG 276
Query: 315 DQAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHM 374
GH++ + TL+ LL +DG +G I++ TN + LDPALLRPGR D I +
Sbjct: 277 MGGGHDE--REQTLNQLLVEMDGFGD--RQGVILMAATNRPDVLDPALLRPGRFDRQIPV 332
Query: 375 SYCTASVFEQL 385
+ EQ+
Sbjct: 333 TNPDLRGREQI 343
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 211 ALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDI 270
L S+LK AI E ++ + E + G RG LLYGPPGTGK+ + A+AN + +
Sbjct: 357 GLSSQLK-AIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYV 415
Query: 271 YDLDLTDV------QSNSDLRSLLLSMPSR--SMLVIEDIDCSITLENRDSKDQAGHNQG 322
++ ++ ++ + LR + R S++ I+++D K + N+
Sbjct: 416 SVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALC------PKREGAQNEV 469
Query: 323 DNKVTLSGLLNFIDGLWSCCSEGRIIIF-TTNHKEKLDPALLRPGRMDMHIHMSYCTA 379
+ +V S LL +DG+ S SEG++++ TN LD AL RPGR D I + A
Sbjct: 470 EKRVVAS-LLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 232 EYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTDV------QSNSDLR 285
E + R+G +G LLYGPPG K+ + A+AN + + ++ +S +R
Sbjct: 651 ESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVR 710
Query: 286 SLL--LSMPSRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKVTLSGLLNFIDGLWSCCS 343
+ S++ +++D ++ +E R S AG N D L+ LL +DG+
Sbjct: 711 ETFRKARAVAPSIIFFDELD-ALAVE-RGSSLGAG-NVADR--VLAQLLTEMDGIEQL-- 763
Query: 344 EGRIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVFEQ---LAFNYLGISHH 395
+ I+ TN +++D AL+RPGR+D I++ A+ + L F+ + +S+
Sbjct: 764 KDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNE 818
>sp|A6TSZ1|FTSH1_ALKMQ ATP-dependent zinc metalloprotease FtsH 1 OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ftsH1 PE=3 SV=1
Length = 590
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 15/179 (8%)
Query: 205 MNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 264
+ F +A + E K+ ME +D F+ E Y+R G +G +LYG PGTGK+ L A+A+
Sbjct: 152 IRFADIAGNQEAKENAMELVD-FLKNPEKYSRYGAKMPKGVILYGSPGTGKTLLARALAS 210
Query: 265 HLKFDIYDLDLTD-VQSNSDL-----RSLLLSMPSRS--MLVIEDIDCSITLENRDSKDQ 316
+ + +D VQ + L R+L + ++ I++ID + RD
Sbjct: 211 EAGVEFLAVSGSDFVQVYAGLGAGRIRNLFKKAKDKGKCVIFIDEIDA--IGKKRDRGGL 268
Query: 317 AGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMS 375
G ++ D TL+ LL + G SEG I++ TN + LD ALLRPGR D I +
Sbjct: 269 GGSDESDR--TLNALLTEMSGFKG--SEGIIVMAATNRLDILDDALLRPGRFDRQIEIG 323
>sp|Q3B6R3|FTSH_PELLD ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon luteolum
(strain DSM 273) GN=ftsH PE=3 SV=1
Length = 706
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Query: 205 MNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 264
+ F +A E K +ME +D F+ + YTR+G +G LL GPPGTGK+ L A+A
Sbjct: 196 ITFKDVAGLDEAKAEVMEVVD-FLKDPKKYTRLGGKLPKGVLLVGPPGTGKTLLAKAVAG 254
Query: 265 HLKFDIYDLDLTDV------QSNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDSKDQ 316
+ + +D + +R L ++ ++ I++ID ++
Sbjct: 255 EADVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEID-AVGRSRGKGAMM 313
Query: 317 AGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
G+++ +N TL+ LL +DG +G I++ TN + LDPALLRPGR D I
Sbjct: 314 GGNDEREN--TLNQLLVEMDGF--ATDKGVILMAATNRPDVLDPALLRPGRFDRQI 365
>sp|D2QZ34|FTSH_PIRSD ATP-dependent zinc metalloprotease FtsH OS=Pirellula staleyi
(strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=ftsH PE=3
SV=1
Length = 700
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 226 NFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTDVQ------ 279
+F+ E Y ++G +G LL GPPGTGK+ L A+A + L +D
Sbjct: 239 DFLRSPEKYQKLGGRIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSDFVEMFVGV 298
Query: 280 SNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDSKDQAGHNQGDNKVTLSGLLNFIDG 337
+ +R + +++ ++ I+++D ++R + GH++ + TL+ LL +DG
Sbjct: 299 GAARVRDMFQQAEAKAPCIIFIDELDA--LGKSRGAGIMGGHDE--REQTLNALLVEMDG 354
Query: 338 LWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
S + G I++ TN E LDPALLRPGR D H+
Sbjct: 355 FGS--NSGVIVMAATNRPETLDPALLRPGRFDRHV 387
>sp|Q5UPR4|YR776_MIMIV Uncharacterized protein R776 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R776 PE=4 SV=1
Length = 314
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 86/151 (56%), Gaps = 16/151 (10%)
Query: 193 CWDAND-----MVLKHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLL 247
C+ +N+ +++ P F L +E++ ++++D+D FM ++ Y +G ++RG LL
Sbjct: 148 CYTSNNNNWSYPIIRRPCKFLDSNLTTEMR-SVLKDVDVFMRNEDTYRELGANYRRGMLL 206
Query: 248 YGPPGTGKSSLIAAMANHLKFDIYDLDLTDVQ-SNSDLRSLLLSMPSRSMLVIEDIDCSI 306
YG G GK+ LI+ ++N D Y L+L S+S L SL ++ +RS+LVIE+ID I
Sbjct: 207 YGESGCGKTGLISIISNKYGMDSYILNLNSKDMSDSVLISLASNVKARSILVIEEIDKQI 266
Query: 307 TLENRDSKDQAGHNQGDNKVTLSGLLNFIDG 337
N + G+ V++ GLL+ +DG
Sbjct: 267 ETLNAN---------GNKNVSIGGLLSALDG 288
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 202 KHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAA 261
K + F +A E K+ + E L F+ + + ++G +G L+ GPPGTGK+ L A
Sbjct: 147 KTKVTFKDVAGVEEAKEEVQE-LVEFLKDPKKFQKLGGRIPKGVLMVGPPGTGKTLLAKA 205
Query: 262 MANHLKFDIYDLDLTDVQSNSDLRSLLLSM-PSRSMLVIEDI----DCSITLENRDSKDQ 316
+A + + S SD + + + SR + E C + ++ D+ +
Sbjct: 206 IAGEADVPFFSI------SGSDFVEMFVGVGASRVRDMFEQARRHAPCIVFIDEIDAVGR 259
Query: 317 A-----GHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMH 371
A G + + TL+ LL +DG+ S EG I+I TN K+ LDPALLRPGR D
Sbjct: 260 ARGTGLGGGHDEREQTLNALLVEMDGIES--QEGVIVIAATNRKDVLDPALLRPGRFDRE 317
Query: 372 IHMSYCTASVFEQL 385
+ ++ EQ+
Sbjct: 318 VRVNLPDIRGREQI 331
>sp|A6LD25|FTSH_PARD8 ATP-dependent zinc metalloprotease FtsH OS=Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
GN=ftsH PE=3 SV=1
Length = 684
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 16/179 (8%)
Query: 205 MNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 264
+ F +A +E K+ + E++ +F+ E YT +G +G LL GPPGTGK+ L A+A
Sbjct: 193 VTFKDVAGLAEAKQEV-EEIVSFLKNPEKYTELGGKIPKGALLVGPPGTGKTLLAKAVAG 251
Query: 265 HLKFDIYDLDLTDV------QSNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDSKDQ 316
+ L +D S +R L +S ++ I++ID R
Sbjct: 252 EANVPFFSLSGSDFVEMFVGVGASRVRDLFRQAKEKSPCIVFIDEIDAV----GRARGKN 307
Query: 317 AGHNQGDNKV-TLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHM 374
A N D + TL+ LL +DG S + G II+ TN + LD ALLR GR D IH+
Sbjct: 308 ANMNSNDERENTLNQLLTEMDGFGS--NSGVIILAATNRADILDKALLRAGRFDRQIHV 364
>sp|O34703|YJOB_BACSU Uncharacterized ATPase YjoB OS=Bacillus subtilis (strain 168)
GN=yjoB PE=1 SV=1
Length = 423
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 28/187 (14%)
Query: 216 LKKAIMEDLDNFMNG-KEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLD 274
LKK I +D F + K +Y +KRG LLYGPPG GK++L+ ++A + +
Sbjct: 193 LKKEIYRSIDQFFHSDKSFYQTYDIPYKRGILLYGPPGNGKTTLVKSIAGSIDAPVAYWQ 252
Query: 275 LTDVQSNSDLRSLLLSMP--SRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKVTLSGLL 332
+T+ S+ + + + + ++LVIEDID S+ + R S L
Sbjct: 253 ITEFTSSETIEEVFQAARRLAPAVLVIEDID-SMPEDVR-----------------SFFL 294
Query: 333 NFIDGLWSCCSEGRIIIFTTNHKEKLDPALL-RPGRMDMHIHMSYCTASVFEQLAFNYLG 391
N +DG + EG +I TTN+ E++DP L+ R GR D +Y E+L Y+
Sbjct: 295 NTLDG--ATSKEGLFLIGTTNYPEEIDPGLMNRAGRFD----RAYEIGLPDEELRLEYMK 348
Query: 392 ISHHHLF 398
+ +F
Sbjct: 349 MRGFGIF 355
>sp|B9MPK5|FTSH_CALBD ATP-dependent zinc metalloprotease FtsH OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)
GN=ftsH PE=3 SV=1
Length = 616
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 15/193 (7%)
Query: 201 LKHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIA 260
LK + F +A E K+ + E +D F+ Y +G +G LL GPPGTGK+ L
Sbjct: 161 LKKKVTFADVAGADEEKEELKEVID-FLKNPRKYIELGARIPKGILLVGPPGTGKTLLAK 219
Query: 261 AMANHLKFDIYDLDLTD-----VQSNSDLRSLLLSMPSRS---MLVIEDIDCSITLENRD 312
A+A + + +D V + L R+ ++ I++ID +R
Sbjct: 220 AVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKRNAPCVVFIDEIDA--VGRHRG 277
Query: 313 SKDQAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
+ GH++ + TL+ LL +DG + +EG I++ TN + LDPALLRPGR D I
Sbjct: 278 AGLGGGHDEREQ--TLNQLLVEMDGFGT--NEGIIVMAATNRPDILDPALLRPGRFDRQI 333
Query: 373 HMSYCTASVFEQL 385
++ A E++
Sbjct: 334 VVNVPDAKAREEI 346
>sp|O59824|YME1_SCHPO ATP-dependent zinc metalloprotease YME1 homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC965.04c PE=3 SV=1
Length = 709
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 17/164 (10%)
Query: 221 MEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTDVQ- 279
+E++ +F+ ++TR+G RG LL GPPGTGK+ L A+A + + +
Sbjct: 279 LEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDE 338
Query: 280 -----SNSDLRSLLLSM--PSRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKVTLSGLL 332
+R L + + S++ I+++D + R+++D A Q TL+ LL
Sbjct: 339 MYVGVGAKRVRELFAAARKQAPSIIFIDELDA--IGQKRNARDAAHMRQ-----TLNQLL 391
Query: 333 NFIDGLWSCCSEGRIIIF--TTNHKEKLDPALLRPGRMDMHIHM 374
+DG ++F TN E LDPAL RPGR D HIH+
Sbjct: 392 VDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHV 435
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 202 KHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAA 261
K F +A E K+ ++E ++ F+ ++ +G +G LL GPPGTGK+ L A
Sbjct: 160 KKKAKFKDVAGADEEKQELVEVVE-FLKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARA 218
Query: 262 MANHLKFDIYDLDLTDVQ------SNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDS 313
+A + + +D S +R L + + ++ I++ID R +
Sbjct: 219 VAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDA--VGRQRGA 276
Query: 314 KDQAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIH 373
GH++ + TL+ LL +DG +EG III TN + LDPALLRPGR D I
Sbjct: 277 GLGGGHDEREQ--TLNQLLVEMDGF--SANEGIIIIAATNRADILDPALLRPGRFDRQIQ 332
Query: 374 MS 375
++
Sbjct: 333 VN 334
>sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4, mitochondrial
OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2
Length = 717
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 218 KAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTD 277
KA +E++ +++ + +TR+G +G LL GPPGTGK+ L A+A +
Sbjct: 236 KAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSC---- 291
Query: 278 VQSNSDLRSLLLSMPSRSM--LVIEDIDCSITLENRDSKDQAG--HNQGDN---KVTLSG 330
S S+ + + + +R + L CS + D D G N D K+TL+
Sbjct: 292 --SGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQ 349
Query: 331 LLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
+L +DG +EG I++ TN E LD AL+RPGR D HI
Sbjct: 350 MLVELDGFKQ--NEGIIVVAATNFPESLDKALVRPGRFDRHI 389
>sp|Q67T82|FTSH2_SYMTH ATP-dependent zinc metalloprotease FtsH 2 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH2 PE=3 SV=1
Length = 587
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 26/198 (13%)
Query: 202 KHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAA 261
+ P+ F +A E+K +E++ +++ + Y +G +G LLYGPPGTGK+ L A
Sbjct: 146 ESPVTFADVAGMDEVKGE-LEEIVDYLKNPDKYRAIGARIPKGVLLYGPPGTGKTLLARA 204
Query: 262 MANHLKFDIYDLDLTDVQSNSDLRSLLLSMPSRSMLVI-----EDIDCSITLENRDSKDQ 316
+A + L S S L + M + + + ++ C + + D D
Sbjct: 205 VAGEAGVPFFAL------SGSSFVELFVGMGASRVRELFAQARKNAPCIVFI---DEIDA 255
Query: 317 AGHNQGDNKV---------TLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGR 367
G +G V TL+ LL +DG EG I++ TN + LD ALLRPGR
Sbjct: 256 VGRQRGSAAVVGGHDEREQTLNQLLTEMDGF--GAYEGVIVMAATNRPDVLDKALLRPGR 313
Query: 368 MDMHIHMSYCTASVFEQL 385
D I + A+ E++
Sbjct: 314 FDRQIPVGPPDAAGREEI 331
>sp|O83746|FTSH_TREPA ATP-dependent zinc metalloprotease FtsH OS=Treponema pallidum
(strain Nichols) GN=ftsH PE=3 SV=1
Length = 609
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 206 NFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANH 265
F +A E K+ +ME +D F+ + YT +G RG LL GPPGTGK+ L A+A
Sbjct: 139 RFADVAGVDEAKEELMEVVD-FLKFPKKYTEIGGKIPRGVLLVGPPGTGKTLLARAVAGE 197
Query: 266 LKFDIYDLDLTDV------QSNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDSKDQA 317
+ + +D S +R L ++ ++ I+++D S+ A
Sbjct: 198 ASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAI-----GKSRLNA 252
Query: 318 GHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
H+ + + TL+ LL +DG + G I++ TN + LDPALLRPGR D +
Sbjct: 253 IHSNDEREQTLNQLLVEMDGFDNTT--GLILLAATNRPDVLDPALLRPGRFDRQV 305
>sp|Q2SF13|FTSH_HAHCH ATP-dependent zinc metalloprotease FtsH OS=Hahella chejuensis
(strain KCTC 2396) GN=ftsH PE=3 SV=1
Length = 619
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 206 NFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANH 265
F+ +A + K+ + E L ++ + + RVG RG LL GPPGTGK+ L A+A
Sbjct: 174 TFDEVAGQTNAKREVQE-LVEYLRDPDRFHRVGALAPRGVLLMGPPGTGKTLLARALAGE 232
Query: 266 LKFDIYDLDLTDV------QSNSDLRSL--LLSMPSRSMLVIEDIDCSITLENRDSKDQA 317
+ Y + ++ S +R L + S S++ I+++D R +
Sbjct: 233 AGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELDS--VGRTRGAGYGG 290
Query: 318 GHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
GH++ + TL+ +L +DG + I++ TN + LDPAL+RPGR D H+
Sbjct: 291 GHDEREQ--TLNQILAEMDGF--AGHDAVIVLAATNRPDVLDPALMRPGRFDRHV 341
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 15/176 (8%)
Query: 205 MNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 264
+ F+ +A E K+ ++E ++ F+ + +T++G G LL GPPGTGK+ L A+A
Sbjct: 184 VRFSDVAGAEEEKQELVEVVE-FLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAG 242
Query: 265 HLKFDIYDLDLTDVQ------SNSDLRSLL--LSMPSRSMLVIEDIDCSITLENRDSKDQ 316
+ + +D S +RSL + +++ I++ID R
Sbjct: 243 EAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAV----GRQRGVG 298
Query: 317 AGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
G + + TL+ LL +DG +EG I+I TN + LDPALLRPGR D +
Sbjct: 299 LGGGNDEREQTLNQLLIEMDGFEG--NEGIIVIAATNRSDVLDPALLRPGRFDRKV 352
>sp|P59652|FTSH_STRR6 ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1
Length = 652
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 15/176 (8%)
Query: 205 MNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 264
+ F+ +A E K+ ++E ++ F+ + +T++G G LL GPPGTGK+ L A+A
Sbjct: 184 VRFSDVAGAEEEKQELVEVVE-FLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAG 242
Query: 265 HLKFDIYDLDLTDVQ------SNSDLRSLL--LSMPSRSMLVIEDIDCSITLENRDSKDQ 316
+ + +D S +RSL + +++ I++ID R
Sbjct: 243 EAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAV----GRQRGVG 298
Query: 317 AGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
G + + TL+ LL +DG +EG I+I TN + LDPALLRPGR D +
Sbjct: 299 LGGGNDEREQTLNQLLIEMDGFEG--NEGIIVIAATNRSDVLDPALLRPGRFDRKV 352
>sp|Q4L3G8|FTSH_STAHJ ATP-dependent zinc metalloprotease FtsH OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ftsH PE=3 SV=1
Length = 727
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 202 KHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAA 261
K + F+ +A E K+ ++E +D F+ + + ++G +G LL GPPGTGK+ L A
Sbjct: 159 KRRVRFSDVAGADEEKQELIEIVD-FLKDNKKFKQMGSRIPKGVLLVGPPGTGKTLLARA 217
Query: 262 MANHLKFDIYDLDLTDVQ------SNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDS 313
+A + + +D S +R L + + ++ I++ID R +
Sbjct: 218 VAGEAGAPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDA--VGRQRGA 275
Query: 314 KDQAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIH 373
GH++ + TL+ LL +DG +EG I+I TN + LDPALLRPGR D I
Sbjct: 276 GVGGGHDE--REQTLNQLLVEMDGFGE--NEGIIMIAATNRPDILDPALLRPGRFDRQIQ 331
Query: 374 MS 375
+
Sbjct: 332 VG 333
>sp|Q9HGM3|YTA12_SCHPO Mitochondrial respiratory chain complexes assembly protein rca1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=yta12 PE=3 SV=1
Length = 773
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 89/194 (45%), Gaps = 24/194 (12%)
Query: 205 MNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 264
+ F +A E K+ IME + F+ ++Y R+G RG +L GPPGTGK+ L A A
Sbjct: 293 IKFADVAGVDEAKEEIMEFV-KFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAG 351
Query: 265 HLKFDIYDLDLTDVQSNSDLRSLLLSMPSR-------------SMLVIEDIDCSITLENR 311
++ V + L + PSR ++ I++ID + R
Sbjct: 352 EA-----NVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDA--IGKAR 404
Query: 312 DSKDQAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMH 371
Q G N + + TL+ LL +DG S SE ++ TN + LDPALLRPGR D
Sbjct: 405 GRGGQFGSND-ERESTLNQLLVEMDGFTS--SEHIVVFAGTNRPDVLDPALLRPGRFDRQ 461
Query: 372 IHMSYCTASVFEQL 385
I + EQ+
Sbjct: 462 ITIDRPDIGGREQI 475
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 205 MNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 264
+ FN +A E K+ + E ++ F+ + + +G +G LL GPPGTGK+ L A+A
Sbjct: 158 VTFNDVAGADEEKEELQEIVE-FLKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKAVAG 216
Query: 265 HLKFDIYDLDLTDVQ------SNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDSKDQ 316
+ + +D + +R L + ++ I++ID R +
Sbjct: 217 EAGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDA--VGRQRGAGLG 274
Query: 317 AGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMS 375
GH++ + TL+ LL +DG +EG I+I TN + LDPALLRPGR D HI +
Sbjct: 275 GGHDEREQ--TLNQLLVEMDGF--SVNEGIIVIAATNRPDILDPALLRPGRFDRHITVG 329
>sp|Q9ZM66|FTSH_HELPJ ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain J99) GN=ftsH PE=3 SV=1
Length = 632
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 191 YGCWDANDMV--LKHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLY 248
+G A ++ K + FN +A + E K+ ++E +D F+ E Y +G +G LL
Sbjct: 151 FGMGSAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVD-FLKYPERYANLGAKIPKGVLLV 209
Query: 249 GPPGTGKSSLIAAMANHLKFDIYDLDLTDV------QSNSDLRSLLLSMPSR--SMLVIE 300
GPPGTGK+ L A+A + + + S +R L + + S++ I+
Sbjct: 210 GPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFID 269
Query: 301 DIDCSITLENRDSKDQAGHNQGDN--KVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKL 358
+ID S+ G G++ + TL+ LL +DG S + I++ TN E L
Sbjct: 270 EIDAI-----GKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEIL 323
Query: 359 DPALLRPGRMDMHI 372
DPAL+RPGR D +
Sbjct: 324 DPALMRPGRFDRQV 337
>sp|D1BLD0|FTSH_VEIPT ATP-dependent zinc metalloprotease FtsH OS=Veillonella parvula
(strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) GN=ftsH
PE=3 SV=1
Length = 642
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 205 MNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 264
++F +A E K+ +E++ F+ +T +G +G LL GPPGTGK+ L A+A
Sbjct: 151 VSFKDVAGAEEAKQE-LEEVVEFLKDPGKFTTIGAKIPKGVLLAGPPGTGKTLLAKAVAG 209
Query: 265 HLKFDIYDLDLTDV------QSNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDSKDQ 316
+ + +D S +R L + ++ I++ID R +
Sbjct: 210 EAGVPFFTISGSDFVEMFVGVGASRVRDLFTQAKKNAPCIIFIDEIDA--VGRQRGAGLG 267
Query: 317 AGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
GH++ + TL+ LL +DG +EG I I TN + LDPALLRPGR D +
Sbjct: 268 GGHDEREQ--TLNQLLVEMDGF--GANEGIITIAATNRPDILDPALLRPGRFDRQV 319
>sp|Q0W257|PAN_UNCMA Proteasome-activating nucleotidase OS=Uncultured methanogenic
archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 232 EYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTDV------QSNSDLR 285
E + +VG +G LLYGPPGTGK+ L A+AN K + +++ + +R
Sbjct: 183 ELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVR 242
Query: 286 SL--LLSMPSRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKV--TLSGLLNFIDGLWSC 341
L L S S++ I++ID SI + DS GD +V TL LL +DG
Sbjct: 243 ELFELAKEKSPSIIFIDEID-SIGAKRLDS-----ITSGDREVQRTLVQLLAEMDGF--- 293
Query: 342 CSEGRI-IIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVFEQL 385
G + I+ TN + LDPALLRPGR D I + TA EQ+
Sbjct: 294 DPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQI 338
>sp|P71408|FTSH_HELPY ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ftsH PE=1 SV=2
Length = 632
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 191 YGCWDANDMV--LKHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLY 248
+G A ++ K + FN +A + E K+ ++E +D F+ E Y +G +G LL
Sbjct: 151 FGMGSAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVD-FLKYPERYANLGAKIPKGVLLV 209
Query: 249 GPPGTGKSSLIAAMANHLKFDIYDLDLTDV------QSNSDLRSLLLSMPSR--SMLVIE 300
GPPGTGK+ L A+A + + + S +R L + + S++ I+
Sbjct: 210 GPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFID 269
Query: 301 DIDCSITLENRDSKDQAGHNQGDN--KVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKL 358
+ID S+ G G++ + TL+ LL +DG S + I++ TN E L
Sbjct: 270 EIDAI-----GKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEIL 323
Query: 359 DPALLRPGRMDMHI 372
DPAL+RPGR D +
Sbjct: 324 DPALMRPGRFDRQV 337
>sp|A9KIG5|FTSH_CLOPH ATP-dependent zinc metalloprotease FtsH OS=Clostridium
phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
GN=ftsH PE=3 SV=1
Length = 577
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 218 KAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDLTD 277
K+++ D+ +F+ E Y+ +G +G +LYGPPGTGK+ + A+A Y + +D
Sbjct: 155 KSMVGDIIDFIKEPEKYSALGARMPKGVMLYGPPGTGKTLIAKAIATEAGVPFYAMSGSD 214
Query: 278 -VQ-----SNSDLRSLL--LSMPSRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKVTLS 329
VQ S +R+L ++++ I++ID + R A +++ D TL+
Sbjct: 215 FVQMYVGVGASRIRTLFNKAKKSEKAVIFIDEIDA--IGKKRARSTSASNDERDQ--TLN 270
Query: 330 GLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMS 375
LL + G ++G ++I TN + LD ALLRPGR D I +
Sbjct: 271 ALLTEMSGFHE--NKGIVVIGATNRLDTLDEALLRPGRFDRQIEVG 314
>sp|P36966|PEX6_YARLI Peroxisomal biogenesis factor 6 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PEX6 PE=3 SV=2
Length = 1024
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 216 LKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLDL 275
+KK I++ ++ + +++ G + G L YGPPGTGK+ L A+A + + +
Sbjct: 727 VKKDILDTIETPLKYPHWFSD-GVKKRSGILFYGPPGTGKTLLAKAIATTFSLNFFSVKG 785
Query: 276 TDV------QSNSDLRSLLLSMPSRSMLVIEDIDCSITLENRDSKDQAGHNQGDNKVTL- 328
++ +S +++R + + C + + DS NQGD+ +
Sbjct: 786 PELLNMYIGESEANVRRVF-------QKARDAKPCVVFFDELDSVAPQRGNQGDSGGVMD 838
Query: 329 ---SGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHIHMSYCTASVFEQL 385
S LL +DG+ + EG ++ TN + LD ALLRPGR D +
Sbjct: 839 RIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKML------------- 885
Query: 386 AFNYLGISHHHLFEQ-IEEMLMKVNVTPAEVAGELMKSKCKY 426
YLGIS H +Q I E L + A+V+ E + +C +
Sbjct: 886 ---YLGISDTHEKQQTIMEALTRKFRLAADVSLEAISKRCPF 924
>sp|A9FDV9|FTSH2_SORC5 ATP-dependent zinc metalloprotease FtsH 2 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH2 PE=3 SV=1
Length = 607
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 206 NFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAAMANH 265
F +A ++E K + E +D F+ E Y ++G RG LL GPPGTGK+ L A+A
Sbjct: 153 TFRDVAGNAEAKTELSEIVD-FLKAPERYEKLGGRMPRGVLLVGPPGTGKTLLARAIAGE 211
Query: 266 LKFDIYDLDLTDVQSNSDLRSLLLSMPSRSMLVI-----EDIDCSITLENRDSKDQ---- 316
+ S S+ + + + + + + E C + ++ D+ +
Sbjct: 212 ASVPFFS------ASGSEFVEMFVGVGAARVRDLFSQAREKGACLVFIDELDAVGKVRGL 265
Query: 317 ----AGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
GH++ + TL+ LL +DG + + ++I TN E LDPALLRPGR D +
Sbjct: 266 GGSVGGHDE--REQTLNQLLTEMDGFDAHTA--MVVIGATNRAEILDPALLRPGRFDRRV 321
Query: 373 HM 374
H+
Sbjct: 322 HI 323
>sp|Q6MLS7|FTSH1_BDEBA ATP-dependent zinc metalloprotease FtsH 1 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH1 PE=3 SV=1
Length = 645
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 15/179 (8%)
Query: 202 KHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAA 261
K+ + F +A E K+ + E + +F+ + YT++G +G LL G PGTGK+ L A
Sbjct: 157 KNRVTFKEVAGVDEAKEDLQE-IVSFLKDPKKYTKLGGRIPKGVLLVGSPGTGKTLLARA 215
Query: 262 MANHLKFDIYDLDLTDVQ------SNSDLRSLLLSMPSRS--MLVIEDIDCSITLENRDS 313
+A + + +D S +R L + ++ I++ID +R +
Sbjct: 216 VAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQGKKNAPCLIFIDEIDA--VGRHRGA 273
Query: 314 KDQAGHNQGDNKVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMHI 372
GH++ + TL+ LL +DG S SEG I+I TN + LDPALLRPGR D +
Sbjct: 274 GMGGGHDEREQ--TLNQLLVEMDGFES--SEGVIMIAATNRPDVLDPALLRPGRFDRRV 328
>sp|O32617|FTSH_HELFC ATP-dependent zinc metalloprotease FtsH OS=Helicobacter felis
(strain ATCC 49179 / NCTC 12436 / CS1) GN=ftsH PE=3 SV=1
Length = 638
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 202 KHPMNFNTLALDSELKKAIMEDLDNFMNGKEYYTRVGKAWKRGYLLYGPPGTGKSSLIAA 261
K + FN +A + E K+ ++E +D F+ + Y +G +G LL GPPGTGK+ L A
Sbjct: 170 KPKVRFNDMAGNEEAKEEVVEIVD-FLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKA 228
Query: 262 MANHLKFDIYDLDLTDV------QSNSDLRSL--LLSMPSRSMLVIEDIDCSITLENRDS 313
+A + + + S +R L + + S++ I++ID S
Sbjct: 229 VAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAI-----GKS 283
Query: 314 KDQAGHNQGDN--KVTLSGLLNFIDGLWSCCSEGRIIIFTTNHKEKLDPALLRPGRMDMH 371
+ G G++ + TL+ LL +DG S + I++ TN E LDPALLRPGR D
Sbjct: 284 RAAGGMISGNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEILDPALLRPGRFDRQ 342
Query: 372 I 372
+
Sbjct: 343 V 343
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,372,449
Number of Sequences: 539616
Number of extensions: 6423035
Number of successful extensions: 26799
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 345
Number of HSP's that attempted gapping in prelim test: 24773
Number of HSP's gapped (non-prelim): 1849
length of query: 450
length of database: 191,569,459
effective HSP length: 121
effective length of query: 329
effective length of database: 126,275,923
effective search space: 41544778667
effective search space used: 41544778667
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)