Your job contains 1 sequence.
>013091
MSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAEKYRKGACANCGAMTHDAK
SCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDAR
RKFNKEQQLKKLEEKNNNNDSGGGGDSDGEDEDDDLRIDEAKVDESKQMDFAKVEKRVRT
TGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFYGGDNQY
RNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKNYIVIKDKLKSRTKETIMEK
YGNAAAEEELPRELLLGQSEREIEYDRAGRIIKGQETALPRSKYEEDVYINNHTCVWGSW
WKDHQWGYKCCKQVIRNSYCTGAAGIEAAEAASDLMKANIARKEASEETQTPVEGKRLAT
WGTDLPDDLVLDEDLLAEALKKVSMSSNL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013091
(449 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018496 - symbol:SMP1 "SWELLMAP 1" species:370... 1648 1.7e-169 1
TAIR|locus:2115115 - symbol:SMP2 "SWELLMAP 2" species:370... 1553 2.0e-159 1
TAIR|locus:2077157 - symbol:AT3G45950 species:3702 "Arabi... 969 1.5e-97 1
DICTYBASE|DDB_G0281901 - symbol:slu7 "putative RNA splici... 562 8.9e-92 2
UNIPROTKB|F1NNB9 - symbol:SLU7 "Pre-mRNA-splicing factor ... 569 6.2e-91 2
UNIPROTKB|F1NRP0 - symbol:SLU7 "Pre-mRNA-splicing factor ... 569 6.2e-91 2
UNIPROTKB|Q5ZIG2 - symbol:SLU7 "Pre-mRNA-splicing factor ... 563 2.7e-90 2
UNIPROTKB|F1RR54 - symbol:SLU7 "Uncharacterized protein" ... 562 3.9e-89 2
UNIPROTKB|E2RRD5 - symbol:SLU7 "Uncharacterized protein" ... 555 2.7e-88 2
UNIPROTKB|Q3ZBE5 - symbol:SLU7 "Pre-mRNA-splicing factor ... 554 3.5e-88 2
RGD|631432 - symbol:Slu7 "SLU7 splicing factor homolog (S... 554 7.2e-88 2
MGI|MGI:2385598 - symbol:Slu7 "SLU7 splicing factor homol... 554 9.1e-88 2
ZFIN|ZDB-GENE-041114-62 - symbol:slu7 "SLU7 splicing fact... 875 1.4e-87 1
UNIPROTKB|O95391 - symbol:SLU7 "Pre-mRNA-splicing factor ... 552 1.9e-87 2
FB|FBgn0039626 - symbol:Slu7 "Slu7" species:7227 "Drosoph... 526 1.1e-76 2
WB|WBGene00010629 - symbol:K07C5.6 species:6239 "Caenorha... 444 4.6e-73 2
ASPGD|ASPL0000074217 - symbol:AN4788 species:162425 "Emer... 422 6.0e-72 2
UNIPROTKB|Q51LA6 - symbol:SLU7 "Pre-mRNA-splicing factor ... 429 1.6e-69 2
GENEDB_PFALCIPARUM|PFF0500c - symbol:PFF0500c "step II sp... 566 7.8e-55 1
UNIPROTKB|C6KSU8 - symbol:PFF0500c "Step II splicing fact... 566 7.8e-55 1
POMBASE|SPBC365.05c - symbol:slu7 "splicing factor Slu7" ... 327 8.5e-43 2
UNIPROTKB|E5RK41 - symbol:SLU7 "Pre-mRNA-splicing factor ... 206 2.9e-16 1
SGD|S000002495 - symbol:SLU7 "RNA splicing factor" specie... 131 7.6e-11 2
CGD|CAL0005702 - symbol:SLU7 species:5476 "Candida albica... 121 3.3e-09 3
>TAIR|locus:2018496 [details] [associations]
symbol:SMP1 "SWELLMAP 1" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA;IMP] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0030422 "production of siRNA involved
in RNA interference" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048522 "positive regulation of cellular process"
evidence=RCA] [GO:0051276 "chromosome organization" evidence=RCA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008380 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0003727 GO:GO:0006397 GO:GO:0005681
EMBL:AC001229 EMBL:AC007234 EMBL:BT002797 IPI:IPI00532994
PIR:E96681 RefSeq:NP_564859.2 UniGene:At.35860 PaxDb:Q9SHY8
PRIDE:Q9SHY8 EnsemblPlants:AT1G65660.1 GeneID:842877
KEGG:ath:AT1G65660 TAIR:At1g65660 eggNOG:NOG251791
HOGENOM:HOG000194391 InParanoid:Q9SHY8 KO:K12819 OMA:PQTLMEM
PhylomeDB:Q9SHY8 ProtClustDB:CLSN2684786 Genevestigator:Q9SHY8
InterPro:IPR021715 Pfam:PF11708 Uniprot:Q9SHY8
Length = 535
Score = 1648 (585.2 bits), Expect = 1.7e-169, P = 1.7e-169
Identities = 304/423 (71%), Positives = 340/423 (80%)
Query: 1 MSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAEKYRKGACANCGAMTHDAK 60
MSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAK+F AEKYRKGAC NCGAMTH AK
Sbjct: 48 MSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACQNCGAMTHTAK 107
Query: 61 SCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDAR 120
+CM+RPRK+GAK+TN+NIAPDEKIE+FELDYDGKRDRWNGYD S+Y RV++ YEA++DAR
Sbjct: 108 ACMDRPRKIGAKYTNMNIAPDEKIESFELDYDGKRDRWNGYDPSTYHRVIDLYEAKEDAR 167
Query: 121 RKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRIDEAKVDESKQMDFAKVEKRVRX 180
+K+ LR+DEAKVDES+QMDFAKVEKRVR
Sbjct: 168 KKYLKEQQLKKLEEKNNNEKGDDANSDGEEDEDD-LRVDEAKVDESRQMDFAKVEKRVRT 226
Query: 181 XXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFYGGDNQY 240
VRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFY GDNQY
Sbjct: 227 TGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFYLGDNQY 286
Query: 241 RNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKNYIVIKDKLKSRTKETIMEK 300
RNSGQALEFK+LNIH+WEAFDKGQD+HMQAAPSQAELLYK++ V K+KLKS+TK+TIM+K
Sbjct: 287 RNSGQALEFKQLNIHSWEAFDKGQDMHMQAAPSQAELLYKSFQVAKEKLKSQTKDTIMDK 346
Query: 301 YGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPRSKYEEDVYINNHTCVWGSW 360
YGN GQSER++EYDRAGRIIKGQE LP+SKYEEDV+ NNHT VWGS+
Sbjct: 347 YGNAATEDEIPMELLLGQSERQVEYDRAGRIIKGQEVILPKSKYEEDVHANNHTSVWGSY 406
Query: 361 WKDHQWGYKCCKQVIRNSYCTXXXXXXXXXXXSDLMKANIARKEASEETQTPVEGKRLAT 420
WKDHQWGYKCC+Q+IRNSYCT DLMKANIARKEA+EE+ VE KR+A+
Sbjct: 407 WKDHQWGYKCCQQIIRNSYCTGSAGIEAAEAALDLMKANIARKEATEESPKKVEEKRMAS 466
Query: 421 WGT 423
WGT
Sbjct: 467 WGT 469
>TAIR|locus:2115115 [details] [associations]
symbol:SMP2 "SWELLMAP 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;RCA] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0051276 "chromosome organization"
evidence=RCA] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008380 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0003727 GO:GO:0006397
GO:GO:0005681 EMBL:Z99707 EMBL:AL161590 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 ProtClustDB:CLSN2684786
InterPro:IPR021715 Pfam:PF11708 EMBL:AY056418 IPI:IPI00533640
PIR:E85438 RefSeq:NP_568017.1 UniGene:At.4652 PaxDb:O23174
PRIDE:O23174 EnsemblPlants:AT4G37120.1 GeneID:829866
KEGG:ath:AT4G37120 TAIR:At4g37120 InParanoid:O23174 OMA:DSAKYDP
PhylomeDB:O23174 Genevestigator:O23174 Uniprot:O23174
Length = 536
Score = 1553 (551.7 bits), Expect = 2.0e-159, P = 2.0e-159
Identities = 285/423 (67%), Positives = 328/423 (77%)
Query: 1 MSSAPWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAEKYRKGACANCGAMTHDAK 60
MS APWYL SE+PSLKHQ+ WK +P K WYDRG K++ AE+YRKGAC NCGAMTH +K
Sbjct: 48 MSKAPWYLKSEQPSLKHQKNWKIEPEPKKIWYDRGKKIYQAEQYRKGACINCGAMTHSSK 107
Query: 61 SCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDAR 120
+CM+RPRK+GAK+TN+NIA DEKIE+FELDYDGKRDRWNGYDTS+Y VV+RY+A+++AR
Sbjct: 108 ACMDRPRKIGAKYTNMNIAADEKIESFELDYDGKRDRWNGYDTSTYRHVVDRYDAKEEAR 167
Query: 121 RKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRIDEAKVDESKQMDFAKVEKRVRX 180
+K+ LR+DEAKVDES+QMDFAKVEKRVR
Sbjct: 168 KKYLKEQQLKKLEEKNNNENGDDATSDGEEDLDD-LRVDEAKVDESRQMDFAKVEKRVRT 226
Query: 181 XXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFYGGDNQY 240
VRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPN+KFY GDNQY
Sbjct: 227 TGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYLGDNQY 286
Query: 241 RNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKNYIVIKDKLKSRTKETIMEK 300
RNSGQALEFK++NIH+ EAFDKG D+HMQAAPSQAELLYKN+ V K+KLK++TK+TIMEK
Sbjct: 287 RNSGQALEFKQINIHSCEAFDKGHDMHMQAAPSQAELLYKNFKVAKEKLKTQTKDTIMEK 346
Query: 301 YGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPRSKYEEDVYINNHTCVWGSW 360
YGN GQSER+IEYDRAGRI+KGQE +P+SKYEEDV+ NNHT VWGSW
Sbjct: 347 YGNAATEGEIPMELLLGQSERQIEYDRAGRIMKGQEVIIPKSKYEEDVHANNHTSVWGSW 406
Query: 361 WKDHQWGYKCCKQVIRNSYCTXXXXXXXXXXXSDLMKANIARKEASEETQTPVEGKRLAT 420
WKDHQWGYKCC+Q IRNSYCT DLMKANIARKEAS+E+ VE K++AT
Sbjct: 407 WKDHQWGYKCCQQTIRNSYCTGSAGIEAAEASIDLMKANIARKEASKESPKKVEEKKMAT 466
Query: 421 WGT 423
WGT
Sbjct: 467 WGT 469
>TAIR|locus:2077157 [details] [associations]
symbol:AT3G45950 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 SMART:SM00343 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008270 GO:GO:0003676 EMBL:AL162459
HOGENOM:HOG000194391 KO:K12819 ProtClustDB:CLSN2684786
InterPro:IPR021715 Pfam:PF11708 IPI:IPI00542568 PIR:T47535
RefSeq:NP_190181.1 UniGene:At.65253 PaxDb:Q9LZT6 PRIDE:Q9LZT6
EnsemblPlants:AT3G45950.1 GeneID:823738 KEGG:ath:AT3G45950
TAIR:At3g45950 eggNOG:NOG305850 InParanoid:Q9LZT6 OMA:DDIPMEL
PhylomeDB:Q9LZT6 Genevestigator:Q9LZT6 Uniprot:Q9LZT6
Length = 385
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 190/316 (60%), Positives = 224/316 (70%)
Query: 5 PWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAEKYRKGACANCGAMTHDAKSCME 64
P Y SEKPSLKHQ+ WK+ P T S+YDRGAK + AEKYRKGAC NCGAMTHD K+CME
Sbjct: 52 PLYAKSEKPSLKHQKNWKTKPVSTTSYYDRGAKTYQAEKYRKGACQNCGAMTHDVKTCME 111
Query: 65 RPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDARRKFX 124
RPRK+GAK+T+ NIAPDEKIE+ E DYDGKRDRWNGYD SSY V +R+EA+++AR K+
Sbjct: 112 RPRKVGAKYTDKNIAPDEKIESLEFDYDGKRDRWNGYDPSSYCHVRDRHEAKENAREKYL 171
Query: 125 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRIDEAKVDESKQMDFAKVEKRVRXXXXX 184
LR+DEAK+DES Q+DFAKV+KRVR
Sbjct: 172 NEQQLIAKLEEKNIDGEEED-----------LRVDEAKIDESMQVDFAKVKKRVRTTDGG 220
Query: 185 XXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFYGGDNQYRNSG 244
VRNLRIRED AKYLLNLDVNSA+YDPK+RSMREDPLP DPN+KF DNQYRNSG
Sbjct: 221 SKGTVRNLRIREDPAKYLLNLDVNSAYYDPKSRSMREDPLPYTDPNEKFCLRDNQYRNSG 280
Query: 245 QALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKNYIVIKDKLKSRTKETIMEKYGNX 304
QA+EFK+ N+++ EAFDKGQDIHMQAAPSQAEL YK + K+KL S+ K+ I+ KYG+
Sbjct: 281 QAIEFKQQNMYSCEAFDKGQDIHMQAAPSQAELCYKRVKIAKEKLNSQRKDAIIAKYGDA 340
Query: 305 XXXXXXXXXXXXGQSE 320
GQS+
Sbjct: 341 AAKDDIPMELLLGQSK 356
>DICTYBASE|DDB_G0281901 [details] [associations]
symbol:slu7 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
dictyBase:DDB_G0281901 GenomeReviews:CM000152_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000043 GO:GO:0000375 eggNOG:NOG251791 KO:K12819
OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 RefSeq:XP_640489.1
STRING:Q54TA0 EnsemblProtists:DDB0233423 GeneID:8623303
KEGG:ddi:DDB_G0281901 ProtClustDB:CLSZ2846778 Uniprot:Q54TA0
Length = 558
Score = 562 (202.9 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 100/193 (51%), Positives = 142/193 (73%)
Query: 189 VRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFYGGDNQYRNSGQALE 248
+RNLRIREDTAKYL NLDVNSA Y+PK+RSMR++PLP+A+PND + GDN R SG+ E
Sbjct: 227 IRNLRIREDTAKYLYNLDVNSAFYEPKSRSMRDNPLPNANPNDIKFAGDNFARTSGETKE 286
Query: 249 FKELNIHAWEAFDKGQDIHMQAAPSQAELLYKNYIVIKDKLKSRTKETIMEKYGNXXXXX 308
F++L AWEA +KGQD+ + +APSQA LL+ +++ K++LK +T+ ++ KYG
Sbjct: 287 FRDLQRFAWEAQEKGQDVDISSAPSQAALLHADFLRKKEQLKQQTRNQLLTKYGGEEHLL 346
Query: 309 XXXXXXXXGQSEREIEYDRAGRIIKGQETALPRSKYEEDVYINNHTCVWGSWWKDHQWGY 368
QSE EY +G++IKG+E + +SKYEEDV++NNH +WGS+W++ QWG+
Sbjct: 347 KQEEIDKVPQSEIYTEYSSSGKLIKGEEKIV-KSKYEEDVFLNNHKSIWGSYWENGQWGF 405
Query: 369 KCCKQVIRNSYCT 381
CC+Q+I+N+YCT
Sbjct: 406 ACCRQLIKNAYCT 418
Score = 372 (136.0 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 72/120 (60%), Positives = 83/120 (69%)
Query: 4 APWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAE-KYRKGACANCGAMTHDAKSC 62
APWYLN+ KPSLKHQR + K WY RGA A K+RKGAC NCGAMTH K C
Sbjct: 51 APWYLNANKPSLKHQRG-VTKKEMDKGWYLRGATTGEAATKFRKGACENCGAMTHKTKDC 109
Query: 63 MERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDARRK 122
ERPRK+GAK+TN +I PDE I+ ELDYD KRD +NGYD SSY V++ YE D R+K
Sbjct: 110 CERPRKLGAKFTNDDIKPDEVIQKLELDYDSKRDPYNGYDPSSYKEVMDIYEKADTERKK 169
>UNIPROTKB|F1NNB9 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 GO:GO:0008270 GO:GO:0003676 InterPro:IPR021715
Pfam:PF11708 GeneTree:ENSGT00390000002292 IPI:IPI00600893
EMBL:AADN02035864 Ensembl:ENSGALT00000041066 ArrayExpress:F1NNB9
Uniprot:F1NNB9
Length = 564
Score = 569 (205.4 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 109/253 (43%), Positives = 155/253 (61%)
Query: 164 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDP 223
DE K D ++ + VRNLRIRED AKYL NLD NSA+YDPKTR+MRE+P
Sbjct: 220 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 277
Query: 224 LPDA--DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKN 281
+ +P++ Y GDN R +G + + + AWEA+DKG ++H+QA P++ ELLYK+
Sbjct: 278 YANTGKNPDEVGYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKS 337
Query: 282 YIVIKDKLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPR 341
+ V K+ K++ KE+I+EKYG Q+E +EY R G +IKGQE A+
Sbjct: 338 FKVKKEDFKAQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQEKAIAC 397
Query: 342 SKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRNSYCTXXXXXXXXXXXSDLMKANIA 401
SKYEEDV INNHTC+WGS+WK+ +WGY+CC ++ SYCT ++L++
Sbjct: 398 SKYEEDVKINNHTCIWGSYWKEGKWGYRCCHSFVKFSYCTGEAGKEIANAEANLLEEQPR 457
Query: 402 RKEASEETQTPVE 414
+E + +T +E
Sbjct: 458 EEEHMTKPKTLME 470
Score = 357 (130.7 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 68/127 (53%), Positives = 88/127 (69%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFH-AEKYRKGACANCGAM 55
+SS PWY++ S++P+LKHQR + Y+ S WY RG K A +YRKGAC NCGA+
Sbjct: 65 ISSVPWYIDPSKRPTLKHQRPQPEKQKQYSSSGDWYKRGVKEHSIATRYRKGACENCGAL 124
Query: 56 THDAKSCMERPRKMGAKWTNINIAPDEKIET-FELDYDGKRDRWNGYDTSSYARVVERYE 114
TH K CMERPRK+GAK+T +NIAPDE ++ DYDGKRDRWNGY+ + ++VE Y
Sbjct: 125 THKKKDCMERPRKVGAKYTGMNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYA 184
Query: 115 ARDDARR 121
D A+R
Sbjct: 185 KVDLAKR 191
Score = 60 (26.2 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 28/105 (26%), Positives = 48/105 (45%)
Query: 158 IDE-AKVDESKQ-MDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPK 215
++E AKVD +K+ + K+++ + N ED KY ++D+ ++D K
Sbjct: 180 VEEYAKVDLAKRTLKAQKLQEELASGKLEQVERDHNSE-DEDEDKYADDIDMPGQNFDSK 238
Query: 216 TR------SMREDP---LPDADPNDKFYGG------DNQYRNSGQ 245
R +RED L + DPN +Y +N Y N+G+
Sbjct: 239 RRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANTGK 283
>UNIPROTKB|F1NRP0 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000380 "alternative mRNA splicing, via spliceosome"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=IEA] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] InterPro:IPR001878 SMART:SM00343
GO:GO:0005737 GO:GO:0006886 GO:GO:0033554 GO:GO:0016607
GO:GO:0008270 GO:GO:0071013 GO:GO:0030532 GO:GO:0000380
GO:GO:0000389 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:AADN02035864 IPI:IPI00818963 Ensembl:ENSGALT00000002279
ArrayExpress:F1NRP0 Uniprot:F1NRP0
Length = 582
Score = 569 (205.4 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 109/253 (43%), Positives = 155/253 (61%)
Query: 164 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDP 223
DE K D ++ + VRNLRIRED AKYL NLD NSA+YDPKTR+MRE+P
Sbjct: 238 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 295
Query: 224 LPDA--DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKN 281
+ +P++ Y GDN R +G + + + AWEA+DKG ++H+QA P++ ELLYK+
Sbjct: 296 YANTGKNPDEVGYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKS 355
Query: 282 YIVIKDKLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPR 341
+ V K+ K++ KE+I+EKYG Q+E +EY R G +IKGQE A+
Sbjct: 356 FKVKKEDFKAQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQEKAIAC 415
Query: 342 SKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRNSYCTXXXXXXXXXXXSDLMKANIA 401
SKYEEDV INNHTC+WGS+WK+ +WGY+CC ++ SYCT ++L++
Sbjct: 416 SKYEEDVKINNHTCIWGSYWKEGKWGYRCCHSFVKFSYCTGEAGKEIANAEANLLEEQPR 475
Query: 402 RKEASEETQTPVE 414
+E + +T +E
Sbjct: 476 EEEHMTKPKTLME 488
Score = 357 (130.7 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 68/127 (53%), Positives = 88/127 (69%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFH-AEKYRKGACANCGAM 55
+SS PWY++ S++P+LKHQR + Y+ S WY RG K A +YRKGAC NCGA+
Sbjct: 67 ISSVPWYIDPSKRPTLKHQRPQPEKQKQYSSSGDWYKRGVKEHSIATRYRKGACENCGAL 126
Query: 56 THDAKSCMERPRKMGAKWTNINIAPDEKIET-FELDYDGKRDRWNGYDTSSYARVVERYE 114
TH K CMERPRK+GAK+T +NIAPDE ++ DYDGKRDRWNGY+ + ++VE Y
Sbjct: 127 THKKKDCMERPRKVGAKYTGMNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYA 186
Query: 115 ARDDARR 121
D A+R
Sbjct: 187 KVDLAKR 193
Score = 56 (24.8 bits), Expect = 5.4e-36, Sum P(2) = 5.4e-36
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 196 EDTAKYLLNLDVNSAHYDPKTR------SMREDP---LPDADPNDKFYGG------DNQY 240
ED KY ++D+ ++D K R +RED L + DPN +Y +N Y
Sbjct: 237 EDEDKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPY 296
Query: 241 RNSGQ 245
N+G+
Sbjct: 297 ANTGK 301
>UNIPROTKB|Q5ZIG2 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819
InterPro:IPR021715 Pfam:PF11708 CTD:10569 HOVERGEN:HBG053287
OrthoDB:EOG42RD76 EMBL:AJ720822 IPI:IPI00600893
RefSeq:NP_001006146.1 UniGene:Gga.20067 STRING:Q5ZIG2 PRIDE:Q5ZIG2
GeneID:416157 KEGG:gga:416157 NextBio:20819662 Uniprot:Q5ZIG2
Length = 564
Score = 563 (203.2 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 109/253 (43%), Positives = 154/253 (60%)
Query: 164 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDP 223
DE K D ++ + VRNLRIRED AKYL NLD NSA+YDPKTR+MRE+P
Sbjct: 220 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 277
Query: 224 LPDA--DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKN 281
+ +P++ Y GDN R +G + + + AWEA+DKG ++H+QA P++ ELLYK+
Sbjct: 278 YANTGKNPDEVGYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKS 337
Query: 282 YIVIKDKLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPR 341
+ V K+ K++ KE+I+EKYG Q+E +EY R G +IKGQE A+
Sbjct: 338 FKVKKEDFKAQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQEKAIAC 397
Query: 342 SKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRNSYCTXXXXXXXXXXXSDLMKANIA 401
SK EEDV INNHTC+WGS+WK+ +WGYKCC ++ SYCT ++L++
Sbjct: 398 SKNEEDVKINNHTCIWGSYWKEGKWGYKCCHSFVKFSYCTGEAGKEIANAEANLLEEQPR 457
Query: 402 RKEASEETQTPVE 414
+E + +T +E
Sbjct: 458 EEEHMTKPKTLME 470
Score = 357 (130.7 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 68/127 (53%), Positives = 88/127 (69%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFH-AEKYRKGACANCGAM 55
+SS PWY++ S++P+LKHQR + Y+ S WY RG K A +YRKGAC NCGA+
Sbjct: 65 ISSVPWYIDPSKRPTLKHQRPQPEKQKQYSSSGDWYKRGVKEHSIATRYRKGACENCGAL 124
Query: 56 THDAKSCMERPRKMGAKWTNINIAPDEKIET-FELDYDGKRDRWNGYDTSSYARVVERYE 114
TH K CMERPRK+GAK+T +NIAPDE ++ DYDGKRDRWNGY+ + ++VE Y
Sbjct: 125 THKKKDCMERPRKVGAKYTGMNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYA 184
Query: 115 ARDDARR 121
D A+R
Sbjct: 185 KVDLAKR 191
Score = 60 (26.2 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 28/105 (26%), Positives = 48/105 (45%)
Query: 158 IDE-AKVDESKQ-MDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPK 215
++E AKVD +K+ + K+++ + N ED KY ++D+ ++D K
Sbjct: 180 VEEYAKVDLAKRTLKAQKLQEELASGKLEQVERDHNSE-DEDEDKYADDIDMPGQNFDSK 238
Query: 216 TR------SMREDP---LPDADPNDKFYGG------DNQYRNSGQ 245
R +RED L + DPN +Y +N Y N+G+
Sbjct: 239 RRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANTGK 283
>UNIPROTKB|F1RR54 [details] [associations]
symbol:SLU7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IEA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 SMART:SM00343 GO:GO:0005737
GO:GO:0006886 GO:GO:0033554 GO:GO:0016607 GO:GO:0008270
GO:GO:0071013 GO:GO:0030532 GO:GO:0000380 GO:GO:0000389 KO:K12819
OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:CU571129 EMBL:CU928350 RefSeq:XP_003134141.1 UniGene:Ssc.83723
Ensembl:ENSSSCT00000018545 GeneID:100517791 KEGG:ssc:100517791
Uniprot:F1RR54
Length = 586
Score = 562 (202.9 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 112/253 (44%), Positives = 153/253 (60%)
Query: 164 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDP 223
DE K D ++ + VRNLRIRED AKYL NLD NSA+YDPKTR+MRE+P
Sbjct: 239 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 296
Query: 224 LPDA--DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKN 281
+A +P++ Y GDN R +G + + + AWEA+DKG ++H+QA P++ ELLYK+
Sbjct: 297 YANAGKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKS 356
Query: 282 YIVIKDKLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPR 341
+ V K+ K + KE+I+EKYG Q+E +EY R G +IKGQE A+
Sbjct: 357 FKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVAC 416
Query: 342 SKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRNSYCTXXXXXXXXXXXSDLMKANIA 401
SKYEEDV INNHT +WGS+WKD +WGYKCC + SYCT +M +
Sbjct: 417 SKYEEDVKINNHTHIWGSYWKDGRWGYKCCHSFFKYSYCTGEAGKEIANSEECIMN-DTT 475
Query: 402 RKEASEETQTPVE 414
+E+ ++ QT +E
Sbjct: 476 GEESVKKPQTLME 488
Score = 347 (127.2 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 68/127 (53%), Positives = 85/127 (66%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFH-AEKYRKGACANCGAM 55
+SS PWY++ S++P+LKHQR + Y+ S WY RG K KYRKGAC NCGAM
Sbjct: 67 ISSVPWYIDPSKRPTLKHQRPQPEKQKQYSSSGEWYKRGVKENSITTKYRKGACENCGAM 126
Query: 56 THDAKSCMERPRKMGAKWTNINIAPDEKIET-FELDYDGKRDRWNGYDTSSYARVVERYE 114
TH K C ERPR++GAK+T NIAPDE I+ DYDGKRDRWNGY+ + ++VE Y
Sbjct: 127 THKKKDCFERPRRVGAKFTGTNIAPDEHIQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYA 186
Query: 115 ARDDARR 121
D A+R
Sbjct: 187 KVDLAKR 193
Score = 56 (24.8 bits), Expect = 8.4e-35, Sum P(2) = 8.4e-35
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 196 EDTAKYLLNLDVNSAHYDPKTR------SMREDP---LPDADPNDKFYGG------DNQY 240
ED KY ++D+ ++D K R +RED L + DPN +Y +N Y
Sbjct: 238 EDEDKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPY 297
Query: 241 RNSGQ 245
N+G+
Sbjct: 298 ANAGK 302
>UNIPROTKB|E2RRD5 [details] [associations]
symbol:SLU7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice site binding"
evidence=IEA] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IEA] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 GO:GO:0005737 GO:GO:0006886 GO:GO:0033554
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 KO:K12819 OMA:PQTLMEM
InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 GO:GO:0030628 GO:GO:0000386
EMBL:AAEX03003047 RefSeq:XP_536446.2 Ensembl:ENSCAFT00000027355
GeneID:479308 KEGG:cfa:479308 Uniprot:E2RRD5
Length = 633
Score = 555 (200.4 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
Identities = 110/253 (43%), Positives = 155/253 (61%)
Query: 164 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDP 223
DE K D ++ + VRNLRIRED AKYL NLD NSA+YDPKTR+MRE+P
Sbjct: 286 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 343
Query: 224 LPDA--DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKN 281
+A +P++ Y GDN R +G + + + AWEA+DKG ++H+QA P++ ELLYK+
Sbjct: 344 YANAGKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKS 403
Query: 282 YIVIKDKLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPR 341
+ V K+ K + KE+I+EKYG Q+E +EY R G +IKGQE A+
Sbjct: 404 FKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVAC 463
Query: 342 SKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRNSYCTXXXXXXXXXXXSDLMKANIA 401
SKYEEDV I+NHT +WGS+WK+ +WGYKCC + SYCT ++ +I+
Sbjct: 464 SKYEEDVKIHNHTHIWGSYWKEGRWGYKCCHSFFKYSYCTGEAGKEIANSEECIIN-DIS 522
Query: 402 RKEASEETQTPVE 414
+E+ ++ QT +E
Sbjct: 523 GEESVKKPQTLME 535
Score = 346 (126.9 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
Identities = 67/127 (52%), Positives = 85/127 (66%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFH-AEKYRKGACANCGAM 55
+SS PWY++ S++P+LKHQR + Y+ S WY RG K KYRKGAC NCGAM
Sbjct: 114 ISSVPWYIDPSKRPTLKHQRPQPEKQKQYSSSGEWYKRGVKENSITTKYRKGACENCGAM 173
Query: 56 THDAKSCMERPRKMGAKWTNINIAPDEKIET-FELDYDGKRDRWNGYDTSSYARVVERYE 114
TH K C ERPR++GAK+T NIAPDE ++ DYDGKRDRWNGY+ + ++VE Y
Sbjct: 174 THKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYA 233
Query: 115 ARDDARR 121
D A+R
Sbjct: 234 KVDLAKR 240
Score = 56 (24.8 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 196 EDTAKYLLNLDVNSAHYDPKTR------SMREDP---LPDADPNDKFYGG------DNQY 240
ED KY ++D+ ++D K R +RED L + DPN +Y +N Y
Sbjct: 285 EDEDKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPY 344
Query: 241 RNSGQ 245
N+G+
Sbjct: 345 ANAGK 349
>UNIPROTKB|Q3ZBE5 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0033554 "cellular
response to stress" evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice
site binding" evidence=IEA] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0006886 GO:GO:0033554 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 eggNOG:NOG251791 HOGENOM:HOG000194391
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 EMBL:BC103394
IPI:IPI00709999 RefSeq:NP_001160089.1 UniGene:Bt.105667
STRING:Q3ZBE5 PRIDE:Q3ZBE5 Ensembl:ENSBTAT00000011131 GeneID:512318
KEGG:bta:512318 CTD:10569 GeneTree:ENSGT00390000002292
HOVERGEN:HBG053287 InParanoid:Q3ZBE5 OrthoDB:EOG42RD76
NextBio:20870335 GO:GO:0030628 GO:GO:0000386 Uniprot:Q3ZBE5
Length = 586
Score = 554 (200.1 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 106/220 (48%), Positives = 141/220 (64%)
Query: 164 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDP 223
DE K D ++ + VRNLRIRED AKYL NLD NSA+YDPKTR+MRE+P
Sbjct: 239 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 296
Query: 224 LPDA--DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKN 281
+A +P++ Y GDN R +G + + + AWEA+DKG ++H+QA P++ ELLYK+
Sbjct: 297 YANAGKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKS 356
Query: 282 YIVIKDKLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPR 341
+ V K+ K + KE+I+EKYG Q+E +EY R G +IKGQE A+
Sbjct: 357 FKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVAC 416
Query: 342 SKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRNSYCT 381
SKYEEDV INNHT +WGS+WK+ +WGYKCC + SYCT
Sbjct: 417 SKYEEDVKINNHTHIWGSYWKEGRWGYKCCHSFFKYSYCT 456
Score = 346 (126.9 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 67/127 (52%), Positives = 85/127 (66%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFH-AEKYRKGACANCGAM 55
+SS PWY++ S++P+LKHQR + Y+ S WY RG K KYRKGAC NCGAM
Sbjct: 67 ISSVPWYIDPSKRPTLKHQRPQPEKQKQYSSSGEWYKRGVKENSITTKYRKGACENCGAM 126
Query: 56 THDAKSCMERPRKMGAKWTNINIAPDEKIET-FELDYDGKRDRWNGYDTSSYARVVERYE 114
TH K C ERPR++GAK+T NIAPDE ++ DYDGKRDRWNGY+ + ++VE Y
Sbjct: 127 THKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYA 186
Query: 115 ARDDARR 121
D A+R
Sbjct: 187 KVDLAKR 193
Score = 56 (24.8 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 196 EDTAKYLLNLDVNSAHYDPKTR------SMREDP---LPDADPNDKFYGG------DNQY 240
ED KY ++D+ ++D K R +RED L + DPN +Y +N Y
Sbjct: 238 EDEDKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPY 297
Query: 241 RNSGQ 245
N+G+
Sbjct: 298 ANAGK 302
>RGD|631432 [details] [associations]
symbol:Slu7 "SLU7 splicing factor homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISS] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS] [GO:0030532
"small nuclear ribonucleoprotein complex" evidence=ISS] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=ISS] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] InterPro:IPR001878
PROSITE:PS50158 SMART:SM00343 RGD:631432 GO:GO:0005737
GO:GO:0006886 GO:GO:0033554 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0005681 GO:GO:0071013 GO:GO:0030532
GO:GO:0000380 GO:GO:0000389 UniGene:Rn.137183 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 CTD:10569 GeneTree:ENSGT00390000002292
HOVERGEN:HBG053287 OrthoDB:EOG42RD76 GO:GO:0030628 GO:GO:0000386
EMBL:AY207315 EMBL:AABR03074285 EMBL:AABR03076495 EMBL:BC062243
IPI:IPI00197160 RefSeq:NP_001094020.1 STRING:Q80ZG5
PhosphoSite:Q80ZG5 PRIDE:Q80ZG5 Ensembl:ENSRNOT00000005132
GeneID:303057 KEGG:rno:303057 UCSC:RGD:631432 InParanoid:Q80ZG5
NextBio:650615 ArrayExpress:Q80ZG5 Genevestigator:Q80ZG5
Uniprot:Q80ZG5
Length = 586
Score = 554 (200.1 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 106/220 (48%), Positives = 141/220 (64%)
Query: 164 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDP 223
DE K D ++ + VRNLRIRED AKYL NLD NSA+YDPKTR+MRE+P
Sbjct: 239 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 296
Query: 224 LPDA--DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKN 281
+A +P++ Y GDN R +G + + + AWEA+DKG ++H+QA P++ ELLYK+
Sbjct: 297 YANAGKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKS 356
Query: 282 YIVIKDKLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPR 341
+ V K+ K + KE+I+EKYG Q+E +EY R G +IKGQE A+
Sbjct: 357 FKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVAC 416
Query: 342 SKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRNSYCT 381
SKYEEDV INNHT +WGS+WK+ +WGYKCC + SYCT
Sbjct: 417 SKYEEDVKINNHTHIWGSYWKEGRWGYKCCHSFFKYSYCT 456
Score = 343 (125.8 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 67/127 (52%), Positives = 85/127 (66%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFH-AEKYRKGACANCGAM 55
+SS PWY++ S++P+LKHQR + ++ S WY RG K KYRKGAC NCGAM
Sbjct: 67 ISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSITTKYRKGACENCGAM 126
Query: 56 THDAKSCMERPRKMGAKWTNINIAPDEKIET-FELDYDGKRDRWNGYDTSSYARVVERYE 114
TH K C ERPR++GAK+T NIAPDE I+ DYDGKRDRWNGY+ + ++VE Y
Sbjct: 127 THKRKDCFERPRRVGAKFTGTNIAPDEHIQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYA 186
Query: 115 ARDDARR 121
D A+R
Sbjct: 187 KVDLAKR 193
Score = 56 (24.8 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 196 EDTAKYLLNLDVNSAHYDPKTR------SMREDP---LPDADPNDKFYGG------DNQY 240
ED KY ++D+ ++D K R +RED L + DPN +Y +N Y
Sbjct: 238 EDEDKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPY 297
Query: 241 RNSGQ 245
N+G+
Sbjct: 298 ANAGK 302
>MGI|MGI:2385598 [details] [associations]
symbol:Slu7 "SLU7 splicing factor homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISO] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=ISO]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISO] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISO] [GO:0030628
"pre-mRNA 3'-splice site binding" evidence=ISO] [GO:0033554
"cellular response to stress" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
MGI:MGI:2385598 GO:GO:0005737 GO:GO:0006886 GO:GO:0033554
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0005681
GO:GO:0071013 GO:GO:0030532 EMBL:AL670472 GO:GO:0000380
GO:GO:0000389 eggNOG:NOG251791 KO:K12819 OMA:PQTLMEM
InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 HOVERGEN:HBG053287 OrthoDB:EOG42RD76
GO:GO:0030628 GO:GO:0000386 ChiTaRS:SLU7 EMBL:AK029117
EMBL:AK046262 EMBL:AK047597 EMBL:AK049178 EMBL:BC013810
EMBL:BC023057 EMBL:BC060954 EMBL:BC082780 EMBL:BC106099
IPI:IPI00221882 RefSeq:NP_683514.2 RefSeq:NP_945174.1
UniGene:Mm.28200 ProteinModelPortal:Q8BHJ9 STRING:Q8BHJ9
PhosphoSite:Q8BHJ9 PaxDb:Q8BHJ9 PRIDE:Q8BHJ9 DNASU:193116
Ensembl:ENSMUST00000020681 Ensembl:ENSMUST00000151880
Ensembl:ENSMUST00000178622 GeneID:193116 KEGG:mmu:193116
UCSC:uc007imp.1 InParanoid:Q8BHJ9 NextBio:371430 Bgee:Q8BHJ9
CleanEx:MM_SLU7 Genevestigator:Q8BHJ9 Uniprot:Q8BHJ9
Length = 585
Score = 554 (200.1 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
Identities = 106/220 (48%), Positives = 141/220 (64%)
Query: 164 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDP 223
DE K D ++ + VRNLRIRED AKYL NLD NSA+YDPKTR+MRE+P
Sbjct: 239 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 296
Query: 224 LPDA--DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKN 281
+A +P++ Y GDN R +G + + + AWEA+DKG ++H+QA P++ ELLYK+
Sbjct: 297 YANAGKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKS 356
Query: 282 YIVIKDKLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPR 341
+ V K+ K + KE+I+EKYG Q+E +EY R G +IKGQE A+
Sbjct: 357 FKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVAC 416
Query: 342 SKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRNSYCT 381
SKYEEDV INNHT +WGS+WK+ +WGYKCC + SYCT
Sbjct: 417 SKYEEDVKINNHTHIWGSYWKEGRWGYKCCHSFFKYSYCT 456
Score = 342 (125.4 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
Identities = 66/127 (51%), Positives = 85/127 (66%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFH-AEKYRKGACANCGAM 55
+SS PWY++ S++P+LKHQR + ++ S WY RG K KYRKGAC NCGAM
Sbjct: 67 ISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSITTKYRKGACENCGAM 126
Query: 56 THDAKSCMERPRKMGAKWTNINIAPDEKIET-FELDYDGKRDRWNGYDTSSYARVVERYE 114
TH K C ERPR++GAK+T NIAPDE ++ DYDGKRDRWNGY+ + ++VE Y
Sbjct: 127 THKRKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYA 186
Query: 115 ARDDARR 121
D A+R
Sbjct: 187 KVDLAKR 193
Score = 56 (24.8 bits), Expect = 3.1e-34, Sum P(2) = 3.1e-34
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 196 EDTAKYLLNLDVNSAHYDPKTR------SMREDP---LPDADPNDKFYGG------DNQY 240
ED KY ++D+ ++D K R +RED L + DPN +Y +N Y
Sbjct: 238 EDEDKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPY 297
Query: 241 RNSGQ 245
N+G+
Sbjct: 298 ANAGK 302
>ZFIN|ZDB-GENE-041114-62 [details] [associations]
symbol:slu7 "SLU7 splicing factor homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR001878 SMART:SM00343
ZFIN:ZDB-GENE-041114-62 GO:GO:0008270 GO:GO:0003676
InterPro:IPR021715 Pfam:PF11708 GeneTree:ENSGT00390000002292
EMBL:AL929007 IPI:IPI00486196 Ensembl:ENSDART00000145241
ArrayExpress:F1RCR0 Bgee:F1RCR0 Uniprot:F1RCR0
Length = 619
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 177/421 (42%), Positives = 236/421 (56%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKWKSDPNYTK-----SWYDRGAKVFHAE-KYRKGACANCG 53
+SS PWY++ S++P+LKHQR + N +K WY RG + KYRKGAC NCG
Sbjct: 108 ISSVPWYIDPSKRPTLKHQRP--QEENQSKFAPIGDWYKRGVQEKSVNTKYRKGACENCG 165
Query: 54 AMTHDAKSCMERPRKMGAKWTNINIAPDEKIET-FELDYDGKRDRWNGYDTSSYARVVER 112
A+TH K C+ERPRK+GAK++ IAPDE + +DYDGKRDRWNGYD + R+VE
Sbjct: 166 ALTHKKKDCLERPRKVGAKFSGTGIAPDEHQQVQLSMDYDGKRDRWNGYDPDEHMRIVEE 225
Query: 113 YEARDDARRKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRIDEAKVDESKQMDFA 172
Y D A+R DE K + M
Sbjct: 226 YSKVDLAKRTLKAQKLQEELASGKLMDQANSRKHEEAVQDHSSEDEDEDKYVDDFDMPGQ 285
Query: 173 KVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDA--DPN 230
+ + R VRNLRIRED AKYL NLD NSA+YDPKTR+MRE+P + +P
Sbjct: 286 NFDSKRRIT-------VRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYSNTGKNPE 338
Query: 231 DKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKNYIVIKDKLK 290
+ Y GDN R SG + + + AWEA++KG ++H+QA P++ ELL+++Y V KD K
Sbjct: 339 EVGYAGDNFVRYSGDTISMAQTQLFAWEAYEKGSEVHLQADPTKLELLHQSYKVKKDDFK 398
Query: 291 SRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPRSKYEEDVYI 350
+ KETI+EKYG Q+E +EY R G ++KGQE A+ +SKYEEDV
Sbjct: 399 EKQKETILEKYGGSEHLDAPPRELLLAQTEEYVEYSRHGAVLKGQEKAVAQSKYEEDVLN 458
Query: 351 NNHTCVWGSWWKDHQWGYKCCKQVIRNSYCTXXXXXXXXXXXSDLMKANIARKEASEETQ 410
NNHTC+WGS+WKD WGYKCC +++ SYCT + ++ + SEE +
Sbjct: 459 NNHTCIWGSYWKDGYWGYKCCHSMVKQSYCTGEAGKKVVSNSCTPFEEDVEEAQTSEEPK 518
Query: 411 T 411
T
Sbjct: 519 T 519
>UNIPROTKB|O95391 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006886 "intracellular protein
transport" evidence=IDA] [GO:0033554 "cellular response to stress"
evidence=IDA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IDA] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=IDA]
[GO:0030628 "pre-mRNA 3'-splice site binding" evidence=IDA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0005737
GO:GO:0006886 EMBL:CH471062 GO:GO:0033554 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 GO:GO:0071013 GO:GO:0030532
EMBL:AC091842 GO:GO:0000380 GO:GO:0000389 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 CTD:10569 HOVERGEN:HBG053287 OrthoDB:EOG42RD76
GO:GO:0030628 GO:GO:0000386 EMBL:AF101074 EMBL:BC010634
EMBL:AY486334 EMBL:DQ174516 EMBL:DQ174517 IPI:IPI00294435
RefSeq:NP_006416.3 UniGene:Hs.435342 IntAct:O95391
MINT:MINT-1467161 STRING:O95391 PhosphoSite:O95391 PaxDb:O95391
PRIDE:O95391 DNASU:10569 Ensembl:ENST00000297151
Ensembl:ENST00000520664 GeneID:10569 KEGG:hsa:10569 UCSC:uc003lyg.3
GeneCards:GC05M159762 HGNC:HGNC:16939 HPA:HPA035907 MIM:605974
neXtProt:NX_O95391 PharmGKB:PA128394574 InParanoid:O95391
PhylomeDB:O95391 ChiTaRS:SLU7 GenomeRNAi:10569 NextBio:40113
PMAP-CutDB:O95391 ArrayExpress:O95391 Bgee:O95391 CleanEx:HS_SLU7
Genevestigator:O95391 Uniprot:O95391
Length = 586
Score = 552 (199.4 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 110/253 (43%), Positives = 153/253 (60%)
Query: 164 DESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDP 223
DE K D ++ + VRNLRIRED AKYL NLD NSA+YDPKTR+MRE+P
Sbjct: 239 DEDKYAD--DIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENP 296
Query: 224 LPDA--DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKN 281
+A +P++ Y GDN R +G + + + AWEA+DKG ++H+QA P++ ELLYK+
Sbjct: 297 YANAGKNPDEVSYAGDNFVRYTGDTISMAQTQLFAWEAYDKGSEVHLQADPTKLELLYKS 356
Query: 282 YIVIKDKLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPR 341
+ V K+ K + KE+I+EKYG Q+E +EY R G +IKGQE A+
Sbjct: 357 FKVKKEDFKEQQKESILEKYGGQEHLDAPPAELLLAQTEDYVEYSRHGTVIKGQERAVAC 416
Query: 342 SKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRNSYCTXXXXXXXXXXXSDLMKANIA 401
SKYEEDV I+NHT +WGS+WK+ +WGYKCC + SYCT ++ I
Sbjct: 417 SKYEEDVKIHNHTHIWGSYWKEGRWGYKCCHSFFKYSYCTGEAGKEIVNSEECIIN-EIT 475
Query: 402 RKEASEETQTPVE 414
+E+ ++ QT +E
Sbjct: 476 GEESVKKPQTLME 488
Score = 341 (125.1 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 66/127 (51%), Positives = 85/127 (66%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFHA-EKYRKGACANCGAM 55
+SS PWY++ S++P+LKHQR + ++ S WY RG K KYRKGAC NCGAM
Sbjct: 67 ISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSIITKYRKGACENCGAM 126
Query: 56 THDAKSCMERPRKMGAKWTNINIAPDEKIET-FELDYDGKRDRWNGYDTSSYARVVERYE 114
TH K C ERPR++GAK+T NIAPDE ++ DYDGKRDRWNGY+ + ++VE Y
Sbjct: 127 THKKKDCFERPRRVGAKFTGTNIAPDEHVQPQLMFDYDGKRDRWNGYNPEEHMKIVEEYA 186
Query: 115 ARDDARR 121
D A+R
Sbjct: 187 KVDLAKR 193
Score = 56 (24.8 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 196 EDTAKYLLNLDVNSAHYDPKTR------SMREDP---LPDADPNDKFYGG------DNQY 240
ED KY ++D+ ++D K R +RED L + DPN +Y +N Y
Sbjct: 238 EDEDKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPY 297
Query: 241 RNSGQ 245
N+G+
Sbjct: 298 ANAGK 302
>FB|FBgn0039626 [details] [associations]
symbol:Slu7 "Slu7" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:AE014297 GO:GO:0007052 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0005681 GO:GO:0000389 eggNOG:NOG251791
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708 CTD:10569
GeneTree:ENSGT00390000002292 GO:GO:0030628 EMBL:AY061470
RefSeq:NP_651659.2 UniGene:Dm.3588 IntAct:Q9VAQ7 MINT:MINT-806770
STRING:Q9VAQ7 PaxDb:Q9VAQ7 EnsemblMetazoa:FBtr0085418 GeneID:43427
KEGG:dme:Dmel_CG1420 UCSC:CG1420-RA FlyBase:FBgn0039626
InParanoid:Q9VAQ7 OrthoDB:EOG4JDFP0 PhylomeDB:Q9VAQ7
GenomeRNAi:43427 NextBio:833867 Bgee:Q9VAQ7 Uniprot:Q9VAQ7
Length = 574
Score = 526 (190.2 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 107/223 (47%), Positives = 134/223 (60%)
Query: 158 IDEAKVDESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTR 217
I + + +E K +D +V+ VRNLRIREDTAKYL NLD NSA+YDPKTR
Sbjct: 206 ISDEEGNEDKYVD--EVDMPGTKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTR 263
Query: 218 SMREDPLPDADPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAEL 277
SMR++P P + + G+N R SG + AWEA KG D+H+ A P++ EL
Sbjct: 264 SMRDNPNPAVPEEEAEFAGENFVRFSGDTTAQATAQLFAWEAHGKGVDVHLLAEPTKLEL 323
Query: 278 LYKNYIVIKDKLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKGQET 337
L K Y K++ KS TK I+EKYG Q+E IEY R+G++IKG E
Sbjct: 324 LQKEYEQKKEQFKSSTKTHIVEKYGGEEHLQVPPKSLLLAQTEEYIEYSRSGKVIKGVEK 383
Query: 338 ALPRSKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRNSYC 380
RS YEEDVYINNHT VWGS+W +WGYKCCK I+NSYC
Sbjct: 384 PKARSIYEEDVYINNHTTVWGSFWNAGRWGYKCCKSFIKNSYC 426
Score = 265 (98.3 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 51/125 (40%), Positives = 74/125 (59%)
Query: 1 MSSAPWYLNSEKPSLKHQRKWKSDPN-YTKSWYDRGAKVFHA-EKYRKGACANCGAMTHD 58
+S+APWY S P+LKHQR D +G K+RKGAC NCGA+TH
Sbjct: 68 ISNAPWYYGSAGPTLKHQRPQHEDEQGQLDKRAPKGLNTARIITKFRKGACENCGAVTHK 127
Query: 59 AKSCMERPRKMGAKWTNINIAPDEK-IETFELDYDGKRDRWNGYDTSSYARVVERYEARD 117
K C+ERPRK+ AK+ + DE + ++YD KRDRW+ YD +++ ++E YE +
Sbjct: 128 RKDCLERPRKVQAKYAESIVVHDEHLVNEAAVNYDEKRDRWSSYDPANHREIIEEYEKVE 187
Query: 118 DARRK 122
+A+R+
Sbjct: 188 EAKRQ 192
>WB|WBGene00010629 [details] [associations]
symbol:K07C5.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0008380 GO:GO:0046872 GO:GO:0018996 GO:GO:0008270
GO:GO:0006397 GO:GO:0040011 GO:GO:0005681 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 EMBL:Z71181
eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715
Pfam:PF11708 GeneTree:ENSGT00390000002292 PIR:T23407
RefSeq:NP_505661.1 ProteinModelPortal:Q21278 STRING:Q21278
PaxDb:Q21278 EnsemblMetazoa:K07C5.6.1 EnsemblMetazoa:K07C5.6.2
GeneID:179443 KEGG:cel:CELE_K07C5.6 UCSC:K07C5.6.1 CTD:179443
WormBase:K07C5.6 InParanoid:Q21278 OMA:TESYIEY NextBio:905420
Uniprot:Q21278
Length = 647
Score = 444 (161.4 bits), Expect = 4.6e-73, Sum P(2) = 4.6e-73
Identities = 87/196 (44%), Positives = 119/196 (60%)
Query: 189 VRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPND---KFYGGDNQYRNSGQ 245
VRNLRIREDTAKYL NL NS +YDPK+RSMRE+P + + GDN R SG+
Sbjct: 237 VRNLRIREDTAKYLYNLAENSPYYDPKSRSMRENPFAGVAGKELEAARFSGDNFVRYSGE 296
Query: 246 ALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKNYIVIKDKLKSRTKETIMEKYGNXX 305
E + AW+A G H A P++ E L K Y K LK+ T++ +++KYG
Sbjct: 297 VTAANEAQVFAWQATRGGVYAHSIAEPTKLEALKKEYEKEKSTLKNETQKELLDKYGGGE 356
Query: 306 XXXXXXXXXXXGQSEREIEYDRAGRIIKGQETALPRSKYEEDVYINNHTCVWGSWWKDHQ 365
Q+E IEY+R G++IKG+E S+++ED+Y NHT V+GS+W++ +
Sbjct: 357 HMERPADELLLAQTESYIEYNRKGKVIKGKEKVAISSRFKEDIYPQNHTSVFGSFWREGR 416
Query: 366 WGYKCCKQVIRNSYCT 381
WGYKCC Q ++NSYCT
Sbjct: 417 WGYKCCHQFVKNSYCT 432
Score = 315 (115.9 bits), Expect = 4.6e-73, Sum P(2) = 4.6e-73
Identities = 60/125 (48%), Positives = 81/125 (64%)
Query: 1 MSSAPWYLNSEKPSLKHQRKWKS-DPNYTK--SWYDRGAKVFHAEKYRKGACANCGAMTH 57
+S PWY+ SE P+LKHQR + + T+ WY +G A K+RKGAC NCGAM H
Sbjct: 64 ISQNPWYVPSEGPTLKHQRPHEEREKKMTQIHEWYQKGTTGKSATKFRKGACENCGAMGH 123
Query: 58 DAKSCMERPRKMGAKWTNINIAPDEKIE-TFELDYDGKRDRWNGYDTSSYARVVERYEAR 116
+ C +RPRK AK TN NIA D+ ++ L +D KRDRWNGYD S++ +V+E YE
Sbjct: 124 QKRDCFDRPRKSNAKETNDNIAEDDYVQPNLTLGFDAKRDRWNGYDPSTHKQVIEDYEHL 183
Query: 117 DDARR 121
++AR+
Sbjct: 184 EEARK 188
>ASPGD|ASPL0000074217 [details] [associations]
symbol:AN4788 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:BN001303 EMBL:AACD01000081 eggNOG:NOG251791
HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715 Pfam:PF11708
OMA:DSAKYDP EMBL:DQ157008 RefSeq:XP_662392.1 STRING:Q5B3U2
EnsemblFungi:CADANIAT00005634 GeneID:2872587 KEGG:ani:AN4788.2
OrthoDB:EOG49GPRB Uniprot:Q5B3U2
Length = 466
Score = 422 (153.6 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 85/194 (43%), Positives = 113/194 (58%)
Query: 190 RNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFYGGDNQYRNSGQALEF 249
RNLRIREDTAKYLLNLD++SA YDPKTR M + + D +N R+SG A EF
Sbjct: 186 RNLRIREDTAKYLLNLDLDSAKYDPKTRRMVDMGAAE-DQAAALVAEENFVRSSGDAAEF 244
Query: 250 KELNIHAWEAFDKG-QDIHMQAAPSQAELLYKNYIVIKDKLKSRTKETIMEKYGNXXXXX 308
+ +AWEA ++G Q IH+QA P+ E+ K + + + ++ ++EKYG
Sbjct: 245 ERAQRYAWEAQERGTQKIHLQANPTSGEITRKKELAESEAKRDAHRKALLEKYGGEQHLK 304
Query: 309 XX-XXXXXXGQSEREIEYDRAGRIIKGQETALPRSKYEEDVYINNHTCVWGSWWKDHQWG 367
++ER +EYD G I KG +SKY ED+ NNH VWGSWW + QWG
Sbjct: 305 HTPLLETMVVENERFVEYDETGAI-KGAPKKATKSKYPEDILTNNHKSVWGSWWHNFQWG 363
Query: 368 YKCCKQVIRNSYCT 381
Y CC ++NSYCT
Sbjct: 364 YACCFSTVKNSYCT 377
Score = 324 (119.1 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 62/126 (49%), Positives = 83/126 (65%)
Query: 1 MSSAPWYLNSEKPS---LKHQRKWKSDPNYTKSWYDRGAKVFHAE-KYRKGACANCGAMT 56
+S P+Y++ + + L+HQR K + +K WY+RG + A KYRKGAC NCGAMT
Sbjct: 21 ISKKPFYIDDDDTANDYLEHQRLHKQTTDQSK-WYERGKRAGPAATKYRKGACENCGAMT 79
Query: 57 HDAKSCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEAR 116
H AK C+ RPRK GAKWT +I DE I+ +L +D KRDRWNGYD + Y +VVE YE
Sbjct: 80 HKAKECLSRPRKHGAKWTGKDIQADEVIQNVDLGWDAKRDRWNGYDAAEYRQVVEEYEEL 139
Query: 117 DDARRK 122
+ +R+
Sbjct: 140 ERLKRQ 145
>UNIPROTKB|Q51LA6 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:CM000230 EMBL:CM001237 eggNOG:NOG251791
KO:K12819 InterPro:IPR021715 Pfam:PF11708 OrthoDB:EOG49GPRB
RefSeq:XP_003720714.1 STRING:Q51LA6 EnsemblFungi:MGG_02985T0
GeneID:2682538 KEGG:mgr:MGG_02985 Uniprot:Q51LA6
Length = 474
Score = 429 (156.1 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 86/196 (43%), Positives = 114/196 (58%)
Query: 190 RNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFYGGDNQYRNSGQALEF 249
R LR+REDTAKYLLNLD++SA YDPKTR++ D D + Y R SG A EF
Sbjct: 187 RQLRLREDTAKYLLNLDLDSAKYDPKTRTI-VDAGATNDKTAELYAEQGFLRQSGDAAEF 245
Query: 250 KELNIHAWEAFDKGQD--IHMQAAPSQAELLYKNYIVIKDKLKSRTKETIMEKYGNXXXX 307
++ +AWEA +KG D +H+QA P+ + K +D + + + EKYG
Sbjct: 246 EKAQRYAWEAQEKGGDTSLHLQANPTAGSYMRKKLKEEEDAKREERERQLREKYGGEETK 305
Query: 308 XXXXXXXXXG--QSEREIEYDRAGRIIKGQETALPRSKYEEDVYINNHTCVWGSWWKDHQ 365
+SER +EYD G +IKG + RSKY+ED++ NNHT VWGSWW D +
Sbjct: 306 VLPDAIRQMAVTESERYVEYDEIG-LIKGGPKGVARSKYKEDIFHNNHTSVWGSWWSDFK 364
Query: 366 WGYKCCKQVIRNSYCT 381
WGY CC ++NSYCT
Sbjct: 365 WGYACCHSFVKNSYCT 380
Score = 294 (108.6 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 58/126 (46%), Positives = 75/126 (59%)
Query: 1 MSSAPWYLNSEKPS---LKHQRKWKSDPNYTKSWYDRGAKVFHAE-KYRKGACANCGAMT 56
+S P+Y E + L+HQR K + + WYDRG + A KYRKGAC NCGAMT
Sbjct: 30 ISKRPFYAVDEGENTDYLEHQRIQKKEKD--TGWYDRGKTLGPAATKYRKGACENCGAMT 87
Query: 57 HDAKSCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVERYEAR 116
H K C+ RPR GAKWT +I DE ++ + +D KRDRWNGYD Y VVE Y
Sbjct: 88 HKVKDCLSRPRAKGAKWTGRDIKADELVQDVRMGWDAKRDRWNGYDAREYQAVVEDYNKM 147
Query: 117 DDARRK 122
++ R++
Sbjct: 148 EELRKE 153
>GENEDB_PFALCIPARUM|PFF0500c [details] [associations]
symbol:PFF0500c "step II splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR001878 SMART:SM00343 GO:GO:0008380
GO:GO:0008270 GO:GO:0005681 GO:GO:0003676 EMBL:AL844505
HOGENOM:HOG000194391 KO:K12819 OMA:PQTLMEM InterPro:IPR021715
Pfam:PF11708 RefSeq:XP_966091.1 ProteinModelPortal:C6KSU8
PRIDE:C6KSU8 EnsemblProtists:PFF0500c:mRNA GeneID:3885881
KEGG:pfa:PFF0500c EuPathDB:PlasmoDB:PF3D7_0610100
ProtClustDB:CLSZ2432798 Uniprot:C6KSU8
Length = 444
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 135/398 (33%), Positives = 198/398 (49%)
Query: 4 APWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAEKYRKGACANCGAMTHDAKSCM 63
APWYLN KP LKHQR SD K +R K+F + C NCG++ H K C+
Sbjct: 48 APWYLNQTKPGLKHQRYKGSDK--IKIEEERNKKLFLNNNKGQDFCKNCGSVAHKEKDCL 105
Query: 64 ERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSS-------YARVVERYEAR 116
ER RK + N D T +L YDG RDRW GY+ ++ Y ++VE + R
Sbjct: 106 ERTRKKKVNFMK-NDNEDFICVTQDLGYDGNRDRWVGYNVNNFDYIYKEYEKIVEEKKKR 164
Query: 117 --DDARRKFXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXLRIDEAKVDESK-QMDF 171
+D ++++ +DE+ +++K + D
Sbjct: 165 KAEDLKKQYEKKSVKKKKTHDNNDDNNNGDNNNDDDEKSSSESENLDESSNEDNKLKPDI 224
Query: 172 AKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDA---- 227
+ RNLRIREDTAKYL NL +NSA YDPK+RSMREDP +
Sbjct: 225 MNNQNCTINKNEKNRNIARNLRIREDTAKYLYNLSLNSAFYDPKSRSMREDPFANIRKHL 284
Query: 228 DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKNYIVIKD 287
+ +D +Y G+N Y N+ A+E K+L + AWE++ +G+++H A P+Q EL+YK Y+ K
Sbjct: 285 NDDDNYYKGENYYNNTDDAIESKKLEVFAWESYKRGENVHFNAQPTQLELMYKEYLEKKK 344
Query: 288 KLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKG---QETALPRSKY 344
K+ + +E I++ Y QSE EY +I + +P SKY
Sbjct: 345 KIIKKKQEDILKTYKCQNNEEQQPNQEELLQSEVYTEYKPIEQIHNNNMKKNIKVP-SKY 403
Query: 345 EEDVYINNHTCVWGSWWKDH--QWGYKCCKQVIRNSYC 380
EED+Y+ +H+ V+GS++ H +WGYKCC + C
Sbjct: 404 EEDIYLFDHSSVFGSYYDKHTKKWGYKCCSSTNKYDKC 441
>UNIPROTKB|C6KSU8 [details] [associations]
symbol:PFF0500c "Step II splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001878 SMART:SM00343 GO:GO:0008380 GO:GO:0008270
GO:GO:0005681 GO:GO:0003676 EMBL:AL844505 HOGENOM:HOG000194391
KO:K12819 OMA:PQTLMEM InterPro:IPR021715 Pfam:PF11708
RefSeq:XP_966091.1 ProteinModelPortal:C6KSU8 PRIDE:C6KSU8
EnsemblProtists:PFF0500c:mRNA GeneID:3885881 KEGG:pfa:PFF0500c
EuPathDB:PlasmoDB:PF3D7_0610100 ProtClustDB:CLSZ2432798
Uniprot:C6KSU8
Length = 444
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 135/398 (33%), Positives = 198/398 (49%)
Query: 4 APWYLNSEKPSLKHQRKWKSDPNYTKSWYDRGAKVFHAEKYRKGACANCGAMTHDAKSCM 63
APWYLN KP LKHQR SD K +R K+F + C NCG++ H K C+
Sbjct: 48 APWYLNQTKPGLKHQRYKGSDK--IKIEEERNKKLFLNNNKGQDFCKNCGSVAHKEKDCL 105
Query: 64 ERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSS-------YARVVERYEAR 116
ER RK + N D T +L YDG RDRW GY+ ++ Y ++VE + R
Sbjct: 106 ERTRKKKVNFMK-NDNEDFICVTQDLGYDGNRDRWVGYNVNNFDYIYKEYEKIVEEKKKR 164
Query: 117 --DDARRKFXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXLRIDEAKVDESK-QMDF 171
+D ++++ +DE+ +++K + D
Sbjct: 165 KAEDLKKQYEKKSVKKKKTHDNNDDNNNGDNNNDDDEKSSSESENLDESSNEDNKLKPDI 224
Query: 172 AKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDA---- 227
+ RNLRIREDTAKYL NL +NSA YDPK+RSMREDP +
Sbjct: 225 MNNQNCTINKNEKNRNIARNLRIREDTAKYLYNLSLNSAFYDPKSRSMREDPFANIRKHL 284
Query: 228 DPNDKFYGGDNQYRNSGQALEFKELNIHAWEAFDKGQDIHMQAAPSQAELLYKNYIVIKD 287
+ +D +Y G+N Y N+ A+E K+L + AWE++ +G+++H A P+Q EL+YK Y+ K
Sbjct: 285 NDDDNYYKGENYYNNTDDAIESKKLEVFAWESYKRGENVHFNAQPTQLELMYKEYLEKKK 344
Query: 288 KLKSRTKETIMEKYGNXXXXXXXXXXXXXGQSEREIEYDRAGRIIKG---QETALPRSKY 344
K+ + +E I++ Y QSE EY +I + +P SKY
Sbjct: 345 KIIKKKQEDILKTYKCQNNEEQQPNQEELLQSEVYTEYKPIEQIHNNNMKKNIKVP-SKY 403
Query: 345 EEDVYINNHTCVWGSWWKDH--QWGYKCCKQVIRNSYC 380
EED+Y+ +H+ V+GS++ H +WGYKCC + C
Sbjct: 404 EEDIYLFDHSSVFGSYYDKHTKKWGYKCCSSTNKYDKC 441
>POMBASE|SPBC365.05c [details] [associations]
symbol:slu7 "splicing factor Slu7" species:4896
"Schizosaccharomyces pombe" [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=ISO] InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
PomBase:SPBC365.05c GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676 GO:GO:0000350
eggNOG:NOG251791 HOGENOM:HOG000194391 KO:K12819 InterPro:IPR021715
Pfam:PF11708 OrthoDB:EOG49GPRB PIR:T40312 RefSeq:NP_596034.1
IntAct:Q9Y7Y2 EnsemblFungi:SPBC365.05c.1 GeneID:2540941
KEGG:spo:SPBC365.05c NextBio:20802056 Uniprot:Q9Y7Y2
Length = 379
Score = 327 (120.2 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 65/131 (49%), Positives = 83/131 (63%)
Query: 1 MSSAPWYLNSEKP--SLKHQRKWKSD-PNYTKS-----WYDRGAKVFHAE-KYRKGACAN 51
+S+APWY + L HQR K + P+ +S WY RG K+ A KYRKGAC N
Sbjct: 56 ISTAPWYAQDDDAVERLAHQRIGKKETPSGGRSSIEGSWYVRGKKLGPAATKYRKGACEN 115
Query: 52 CGAMTHDAKSCMERPRKMGAKWTNINIAPDEKIETFELDYDGKRDRWNGYDTSSYARVVE 111
CGAM+H K CMERPRK GA+WT +I DE I+ + +D KRDRWNGYD + Y +V+E
Sbjct: 116 CGAMSHKVKDCMERPRKRGARWTGEDIQADEVIQDINVSWDAKRDRWNGYDATDYKKVIE 175
Query: 112 RYEARDDARRK 122
RYE D+ + K
Sbjct: 176 RYEKLDELQNK 186
Score = 142 (55.0 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 191 NLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFYGGDNQYRNSGQALE-F 249
+LR+RED YL D + Y+PK+RSMR++ D GG + SG E F
Sbjct: 220 SLRMREDVVAYL-RADNKNLQYEPKSRSMRDET--GYHMVDDSSGGAGFVKASGGEKEDF 276
Query: 250 KELNIHAWEAFDKGQDIHMQAAPSQAELLYKNYIVIKDKLKSRTKETIMEKYGN 303
++L + AWEA G +H+ A P+ EL ++ + + ++I+++YG+
Sbjct: 277 EKLQMFAWEAERSGTRVHVVANPTAGELEFRKNKASRMTTQKHIDQSILDRYGD 330
>UNIPROTKB|E5RK41 [details] [associations]
symbol:SLU7 "Pre-mRNA-splicing factor SLU7" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 GO:GO:0008270 GO:GO:0003676 EMBL:AC091842
HGNC:HGNC:16939 ChiTaRS:SLU7 IPI:IPI00979899
Ensembl:ENST00000521826 ArrayExpress:E5RK41 Bgee:E5RK41
Uniprot:E5RK41
Length = 143
Score = 206 (77.6 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 1 MSSAPWYLN-SEKPSLKHQRKW-KSDPNYTKS--WYDRGAKVFHA-EKYRKGACANCGAM 55
+SS PWY++ S++P+LKHQR + ++ S WY RG K KYRKGAC NCGAM
Sbjct: 67 ISSVPWYIDPSKRPTLKHQRPQPEKQKQFSSSGEWYKRGVKENSIITKYRKGACENCGAM 126
Query: 56 THDAKSCMERPRKMGAK 72
TH K C ERPR++GAK
Sbjct: 127 THKKKDCFERPRRVGAK 143
>SGD|S000002495 [details] [associations]
symbol:SLU7 "RNA splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IEA;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000386 "second
spliceosomal transesterification activity" evidence=IDA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 SGD:S000002495
GO:GO:0046872 GO:GO:0008270 EMBL:BK006938 GO:GO:0005681
GO:GO:0003676 EMBL:Z46796 EMBL:X82086 Gene3D:4.10.60.10
GO:GO:0000350 KO:K12819 InterPro:IPR021715 Pfam:PF11708
GeneTree:ENSGT00390000002292 OrthoDB:EOG49GPRB EMBL:X67810
EMBL:Z74384 EMBL:Z74385 EMBL:AY557701 PIR:A46229 RefSeq:NP_010373.3
RefSeq:NP_010377.3 ProteinModelPortal:Q02775 DIP:DIP-220N
IntAct:Q02775 MINT:MINT-394061 STRING:Q02775 PaxDb:Q02775
EnsemblFungi:YDR088C GeneID:851661 GeneID:851666 KEGG:sce:YDR088C
KEGG:sce:YDR092W CYGD:YDR088c eggNOG:NOG278054 HOGENOM:HOG000154339
KO:K10580 OMA:GYSGKEY NextBio:969269 Genevestigator:Q02775
GermOnline:YDR088C Uniprot:Q02775
Length = 382
Score = 131 (51.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 34 RGAKVFHAEKYRKGACANCGAMTHDAKSCMERPRKMGAKWTNINIAPDEK---IETFELD 90
R K+ + + C NCG H K CME+PRKM ++N + + + D
Sbjct: 107 RPQKMSVRDSHSLSFCRNCGEAGHKEKDCMEKPRKMQKLVPDLNSQKNNGTVLVRATDDD 166
Query: 91 YDGKRDRWNGYDTSSYARVVERYEARDDARRK 122
+D ++DRW GY Y ++ ++E D R K
Sbjct: 167 WDSRKDRWYGYSGKEYNELISKWER--DKRNK 196
Score = 90 (36.7 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 193 RIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFYGGDNQYRNSGQALEFKEL 252
R+RED A YL +++ ++YDPK+R + + L D K + + +G+ L+ EL
Sbjct: 247 RLREDKAAYLNDINSTESNYDPKSRLYKTETLGAVDEKSKMF----RRHLTGEGLKLNEL 302
Query: 253 N 253
N
Sbjct: 303 N 303
>CGD|CAL0005702 [details] [associations]
symbol:SLU7 species:5476 "Candida albicans" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0000386 "second
spliceosomal transesterification activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] CGD:CAL0005702
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 EMBL:AACQ01000029
EMBL:AACQ01000028 eggNOG:NOG251791 KO:K12819 InterPro:IPR021715
Pfam:PF11708 RefSeq:XP_719802.1 RefSeq:XP_719919.1 GeneID:3638501
GeneID:3638614 KEGG:cal:CaO19.14119 KEGG:cal:CaO19.6827
Uniprot:Q5ADL4
Length = 350
Score = 121 (47.7 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 318 QSEREIEYDRAGRIIKGQETALPRSKYEEDVYINNHTCVWGSWWKDHQWGYKCCKQVIRN 377
QS++E+ ++ + E ++ + ED NH ++GS++++ +WGYKCCKQ +N
Sbjct: 285 QSKQEV-MEKYNASTESDEKESKKTGHLEDKLFLNHKYIYGSYYENGKWGYKCCKQFDKN 343
Query: 378 SYCT 381
S CT
Sbjct: 344 SRCT 347
Score = 71 (30.1 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 83 KIETFELDYDGKRDRWNGYDTSSYARVVERYEARDDARR 121
++E E YD KRDRW GY T + ++ + + +R+
Sbjct: 80 RVEENE-SYDSKRDRWYGYSTEEWLTHLKNWNDKKQSRK 117
Score = 48 (22.0 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 192 LRIREDTAKYLLNLDVNSAH-----YDPKTRSMRE 221
LR R+D Y+ N+ N + YDPK+R ++
Sbjct: 159 LRDRQDIPAYIYNITSNPNNKIRIEYDPKSRLAKD 193
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 449 367 0.00084 117 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 624 (66 KB)
Total size of DFA: 285 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.30u 0.09s 26.39t Elapsed: 00:00:02
Total cpu time: 26.31u 0.09s 26.40t Elapsed: 00:00:02
Start: Thu May 9 18:15:01 2013 End: Thu May 9 18:15:03 2013