Query 013096
Match_columns 449
No_of_seqs 331 out of 2463
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 00:22:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013096.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013096hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05631 DUF791: Protein of un 100.0 7E-46 1.5E-50 350.6 35.2 293 47-342 27-325 (354)
2 KOG4332 Predicted sugar transp 100.0 5.8E-47 1.3E-51 337.7 23.0 356 47-404 30-398 (454)
3 COG2814 AraJ Arabinose efflux 100.0 1.5E-30 3.2E-35 252.0 42.5 362 65-439 24-389 (394)
4 PRK10406 alpha-ketoglutarate t 100.0 2.7E-28 5.9E-33 247.1 42.6 370 60-438 24-426 (432)
5 PRK03545 putative arabinose tr 100.0 1.8E-27 4E-32 237.9 43.7 336 71-422 26-366 (390)
6 TIGR00903 2A0129 major facilit 100.0 4.7E-28 1E-32 239.6 38.8 324 72-409 9-340 (368)
7 PRK15403 multidrug efflux syst 100.0 4.1E-27 8.8E-32 237.0 42.9 328 69-409 31-370 (413)
8 PRK10213 nepI ribonucleoside t 100.0 1.3E-26 2.9E-31 231.9 45.6 338 69-422 35-377 (394)
9 PRK05122 major facilitator sup 100.0 3.5E-27 7.7E-32 236.4 39.5 357 61-436 22-389 (399)
10 PRK09705 cynX putative cyanate 100.0 3.6E-27 7.7E-32 236.0 39.3 339 72-426 27-371 (393)
11 PRK11195 lysophospholipid tran 100.0 1.3E-26 2.8E-31 231.9 42.9 363 58-439 7-383 (393)
12 TIGR00900 2A0121 H+ Antiporter 100.0 3.4E-27 7.3E-32 232.5 38.2 335 60-405 5-356 (365)
13 PRK11646 multidrug resistance 100.0 9.2E-27 2E-31 233.5 41.2 335 64-411 20-359 (400)
14 PRK15402 multidrug efflux syst 100.0 2E-26 4.3E-31 231.6 42.8 330 71-413 30-372 (406)
15 PRK11551 putative 3-hydroxyphe 100.0 2.7E-26 5.9E-31 230.5 43.1 326 73-411 34-370 (406)
16 TIGR01299 synapt_SV2 synaptic 100.0 8.1E-27 1.8E-31 246.4 40.8 378 53-441 162-739 (742)
17 PRK09874 drug efflux system pr 100.0 2.5E-26 5.5E-31 230.6 42.5 357 60-429 20-391 (408)
18 PRK10091 MFS transport protein 100.0 3E-26 6.5E-31 228.5 42.4 364 63-441 12-381 (382)
19 PRK03633 putative MFS family t 100.0 7E-26 1.5E-30 225.7 41.9 372 54-447 3-381 (381)
20 PRK12382 putative transporter; 100.0 4.7E-26 1E-30 227.7 40.2 344 63-426 24-379 (392)
21 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3E-26 6.5E-31 230.7 38.8 357 53-420 3-405 (412)
22 PRK10489 enterobactin exporter 100.0 3.2E-26 6.9E-31 230.9 38.9 368 62-444 25-408 (417)
23 PRK14995 methyl viologen resis 100.0 3E-26 6.5E-31 236.1 38.9 324 65-399 17-400 (495)
24 PRK10642 proline/glycine betai 100.0 7.7E-26 1.7E-30 232.8 40.1 326 57-391 15-383 (490)
25 PRK12307 putative sialic acid 100.0 6.2E-26 1.3E-30 229.3 38.5 350 53-415 13-387 (426)
26 PRK11663 regulatory protein Uh 100.0 1.2E-25 2.6E-30 228.0 40.6 354 53-420 18-408 (434)
27 PRK11273 glpT sn-glycerol-3-ph 100.0 5.8E-26 1.3E-30 231.5 38.5 382 51-445 22-444 (452)
28 PF05977 MFS_3: Transmembrane 100.0 2.2E-25 4.8E-30 228.1 42.4 357 59-429 15-387 (524)
29 TIGR00890 2A0111 Oxalate/Forma 100.0 4.3E-26 9.3E-31 225.4 35.9 337 71-420 20-366 (377)
30 PRK09556 uhpT sugar phosphate 100.0 1.7E-26 3.8E-31 236.3 33.9 328 73-410 48-411 (467)
31 TIGR00891 2A0112 putative sial 100.0 5.6E-26 1.2E-30 227.3 36.7 353 54-417 8-397 (405)
32 PRK10054 putative transporter; 100.0 1.8E-25 3.9E-30 223.8 40.0 345 58-416 11-364 (395)
33 TIGR00710 efflux_Bcr_CflA drug 100.0 2.9E-25 6.3E-30 220.8 41.2 329 65-406 16-356 (385)
34 TIGR00899 2A0120 sugar efflux 100.0 1.5E-25 3.4E-30 222.1 39.0 351 60-422 3-360 (375)
35 PRK11043 putative transporter; 100.0 5.5E-25 1.2E-29 220.7 43.2 335 66-414 18-360 (401)
36 PF07690 MFS_1: Major Facilita 100.0 2.4E-26 5.3E-31 225.4 32.7 329 61-401 3-350 (352)
37 PRK10133 L-fucose transporter; 100.0 3.8E-25 8.3E-30 224.1 42.3 339 63-413 35-409 (438)
38 PRK15075 citrate-proton sympor 100.0 1.1E-25 2.3E-30 228.3 38.2 350 55-413 12-396 (434)
39 PRK09952 shikimate transporter 100.0 3.8E-25 8.3E-30 224.4 42.1 346 55-410 19-405 (438)
40 PRK11102 bicyclomycin/multidru 100.0 2.5E-25 5.4E-30 221.1 38.9 312 70-394 7-330 (377)
41 PRK03699 putative transporter; 100.0 4E-25 8.6E-30 221.3 40.4 354 72-440 25-384 (394)
42 PRK11652 emrD multidrug resist 100.0 9.6E-25 2.1E-29 218.5 41.7 328 65-405 19-353 (394)
43 TIGR00893 2A0114 d-galactonate 100.0 3.3E-25 7.2E-30 220.1 37.7 338 71-421 11-384 (399)
44 TIGR00897 2A0118 polyol permea 100.0 4.2E-24 9.1E-29 214.5 43.4 349 60-422 19-387 (402)
45 PRK10473 multidrug efflux syst 100.0 4.3E-24 9.4E-29 213.6 43.3 311 62-387 11-327 (392)
46 PRK10504 putative transporter; 100.0 2.8E-24 6.1E-29 220.2 41.4 322 69-402 25-405 (471)
47 TIGR00711 efflux_EmrB drug res 99.9 1.3E-24 2.8E-29 223.3 38.0 326 65-402 13-400 (485)
48 TIGR00902 2A0127 phenyl propri 99.9 1.1E-23 2.4E-28 210.0 41.7 337 62-416 12-360 (382)
49 PRK15011 sugar efflux transpor 99.9 1.7E-23 3.8E-28 209.4 41.5 353 56-422 17-377 (393)
50 PRK03893 putative sialic acid 99.9 9.3E-24 2E-28 217.7 39.5 334 71-417 37-434 (496)
51 PLN00028 nitrate transmembrane 99.9 1E-23 2.2E-28 216.1 38.5 316 72-399 54-396 (476)
52 PRK10077 xylE D-xylose transpo 99.9 1E-23 2.2E-28 216.5 37.8 337 54-399 8-413 (479)
53 TIGR00898 2A0119 cation transp 99.9 2.6E-24 5.7E-29 222.4 31.2 352 75-445 110-504 (505)
54 TIGR00895 2A0115 benzoate tran 99.9 1.9E-23 4.1E-28 208.2 35.4 321 72-405 35-393 (398)
55 PRK15034 nitrate/nitrite trans 99.9 2.7E-22 5.9E-27 201.0 41.3 304 65-381 44-376 (462)
56 PRK11128 putative 3-phenylprop 99.9 2.1E-22 4.5E-27 200.8 40.4 331 67-415 17-359 (382)
57 TIGR00879 SP MFS transporter, 99.9 1.3E-23 2.7E-28 214.4 32.0 358 73-442 47-477 (481)
58 TIGR00887 2A0109 phosphate:H+ 99.9 6.9E-23 1.5E-27 211.6 37.0 389 50-448 8-501 (502)
59 TIGR00712 glpT glycerol-3-phos 99.9 6.5E-23 1.4E-27 208.2 35.6 331 80-421 52-418 (438)
60 TIGR00894 2A0114euk Na(+)-depe 99.9 2.6E-23 5.7E-28 212.7 31.6 318 83-409 70-420 (465)
61 TIGR00896 CynX cyanate transpo 99.9 1.1E-22 2.3E-27 200.8 34.6 325 72-412 18-349 (355)
62 cd06174 MFS The Major Facilita 99.9 1.4E-22 2.9E-27 198.1 34.8 321 64-419 9-335 (352)
63 TIGR00886 2A0108 nitrite extru 99.9 5.2E-23 1.1E-27 203.4 32.1 321 65-396 12-363 (366)
64 COG2271 UhpC Sugar phosphate p 99.9 1.9E-23 4.2E-28 200.1 27.7 359 49-418 20-416 (448)
65 TIGR00881 2A0104 phosphoglycer 99.9 1.9E-23 4.1E-28 206.7 28.4 332 71-413 12-374 (379)
66 PRK11010 ampG muropeptide tran 99.9 1.7E-21 3.6E-26 200.3 43.4 358 66-437 24-404 (491)
67 PRK11902 ampG muropeptide tran 99.9 2.9E-21 6.3E-26 193.9 43.3 348 59-423 4-377 (402)
68 TIGR00892 2A0113 monocarboxyla 99.9 3.1E-22 6.7E-27 204.1 36.7 354 55-420 16-405 (455)
69 PRK06814 acylglycerophosphoeth 99.9 2.5E-22 5.4E-27 226.9 39.4 334 59-405 16-389 (1140)
70 PRK09528 lacY galactoside perm 99.9 3.4E-22 7.4E-27 201.8 35.9 341 63-419 19-386 (420)
71 TIGR00889 2A0110 nucleoside tr 99.9 8.4E-22 1.8E-26 198.7 38.3 355 65-437 13-404 (418)
72 TIGR00885 fucP L-fucose:H+ sym 99.9 2.6E-21 5.6E-26 194.5 41.3 335 63-410 12-380 (410)
73 PRK08633 2-acyl-glycerophospho 99.9 6.7E-22 1.5E-26 223.7 41.5 334 63-409 18-381 (1146)
74 TIGR00901 2A0125 AmpG-related 99.9 6.7E-22 1.5E-26 195.1 34.1 314 72-396 6-355 (356)
75 TIGR00882 2A0105 oligosacchari 99.9 3.4E-21 7.4E-26 193.0 38.5 343 62-420 10-379 (396)
76 TIGR00883 2A0106 metabolite-pr 99.9 6.7E-22 1.5E-26 196.6 33.1 329 75-413 14-377 (394)
77 COG2223 NarK Nitrate/nitrite t 99.9 1.3E-21 2.9E-26 187.8 29.8 331 53-398 9-361 (417)
78 TIGR02718 sider_RhtX_FptX side 99.9 2.4E-19 5.2E-24 179.2 41.4 349 62-422 9-377 (390)
79 TIGR00792 gph sugar (Glycoside 99.9 1.7E-20 3.8E-25 190.1 33.4 321 71-399 16-367 (437)
80 PRK10207 dipeptide/tripeptide 99.9 1.5E-19 3.2E-24 185.3 38.5 316 78-402 39-431 (489)
81 TIGR00924 yjdL_sub1_fam amino 99.9 8.9E-19 1.9E-23 179.3 39.5 322 73-402 29-433 (475)
82 COG0738 FucP Fucose permease [ 99.9 1.6E-18 3.5E-23 165.7 37.5 339 64-414 23-387 (422)
83 PRK09584 tppB putative tripept 99.9 9E-18 2E-22 172.9 42.7 306 81-397 49-429 (500)
84 KOG2532 Permease of the major 99.9 2.2E-19 4.8E-24 181.1 28.6 318 83-409 67-417 (466)
85 COG2807 CynX Cyanate permease 99.8 2.4E-17 5.2E-22 155.4 33.7 324 73-413 31-361 (395)
86 PF01306 LacY_symp: LacY proto 99.8 1.3E-16 2.7E-21 156.8 37.1 356 71-443 24-408 (412)
87 KOG2615 Permease of the major 99.8 3.9E-18 8.5E-23 161.0 24.9 314 89-412 68-414 (451)
88 PF03825 Nuc_H_symport: Nucleo 99.8 4.6E-16 9.9E-21 155.1 41.3 345 55-413 3-366 (400)
89 KOG1330 Sugar transporter/spin 99.8 1.8E-19 3.8E-24 174.6 15.7 173 62-241 37-214 (493)
90 KOG3764 Vesicular amine transp 99.8 1.5E-18 3.3E-23 164.8 21.2 318 83-416 100-434 (464)
91 KOG0569 Permease of the major 99.8 2.3E-16 5E-21 157.8 34.5 350 82-442 47-461 (485)
92 TIGR00806 rfc RFC reduced fola 99.8 1E-15 2.2E-20 151.4 35.8 331 52-396 22-399 (511)
93 TIGR00805 oat sodium-independe 99.8 5.1E-18 1.1E-22 178.8 19.5 252 71-332 50-405 (633)
94 PRK09669 putative symporter Ya 99.8 1.1E-15 2.4E-20 155.5 35.5 317 74-398 29-374 (444)
95 PRK09848 glucuronide transport 99.8 1.6E-15 3.5E-20 154.5 34.8 319 71-398 25-374 (448)
96 KOG2533 Permease of the major 99.8 4.4E-16 9.6E-21 157.7 29.1 231 82-318 74-334 (495)
97 TIGR01301 GPH_sucrose GPH fami 99.8 4.8E-15 1E-19 149.8 36.1 364 68-437 18-473 (477)
98 TIGR00788 fbt folate/biopterin 99.8 6.3E-16 1.4E-20 158.0 30.1 317 78-408 50-409 (468)
99 KOG0255 Synaptic vesicle trans 99.8 1.6E-15 3.5E-20 157.5 32.0 340 82-439 111-496 (521)
100 KOG0254 Predicted transporter 99.7 1.5E-15 3.3E-20 157.2 30.7 296 90-396 90-441 (513)
101 KOG2504 Monocarboxylate transp 99.7 4.5E-15 9.8E-20 151.7 31.2 347 76-436 68-476 (509)
102 KOG0252 Inorganic phosphate tr 99.7 3.2E-16 7E-21 151.6 14.1 302 86-394 81-450 (538)
103 PF06609 TRI12: Fungal trichot 99.7 9.1E-14 2E-18 142.7 32.9 306 74-392 64-447 (599)
104 PF13347 MFS_2: MFS/sugar tran 99.7 1.4E-14 3E-19 146.8 25.8 313 76-396 23-368 (428)
105 PRK10429 melibiose:sodium symp 99.7 2.4E-13 5.3E-18 139.4 35.3 320 70-397 22-378 (473)
106 PRK15462 dipeptide/tripeptide 99.7 2.1E-12 4.4E-17 131.3 40.7 141 82-228 38-181 (493)
107 PF00083 Sugar_tr: Sugar (and 99.7 7.6E-21 1.7E-25 193.7 -23.5 350 89-448 46-449 (451)
108 TIGR01272 gluP glucose/galacto 99.6 6E-13 1.3E-17 128.7 29.1 270 137-419 6-298 (310)
109 KOG0253 Synaptic vesicle trans 99.6 9.6E-14 2.1E-18 130.8 22.1 368 51-436 71-519 (528)
110 PF11700 ATG22: Vacuole efflux 99.6 3.5E-11 7.6E-16 122.5 40.6 317 92-413 73-444 (477)
111 PRK11462 putative transporter; 99.6 3.1E-11 6.7E-16 123.3 39.8 299 74-380 29-348 (460)
112 PTZ00207 hypothetical protein; 99.6 2.2E-11 4.7E-16 126.0 36.7 136 74-221 47-190 (591)
113 TIGR00899 2A0120 sugar efflux 99.5 2.1E-11 4.5E-16 120.8 23.9 142 82-232 228-370 (375)
114 PRK15011 sugar efflux transpor 99.5 1.9E-11 4.1E-16 122.4 23.8 154 75-238 237-392 (393)
115 COG3104 PTR2 Dipeptide/tripept 99.4 1.3E-10 2.8E-15 114.9 28.0 153 71-230 39-200 (498)
116 COG2211 MelB Na+/melibiose sym 99.4 5.3E-10 1.1E-14 111.4 31.8 300 73-380 31-357 (467)
117 TIGR00902 2A0127 phenyl propri 99.4 5.6E-11 1.2E-15 118.5 23.5 149 72-230 223-373 (382)
118 PF03209 PUCC: PUCC protein; 99.4 8.3E-09 1.8E-13 100.3 36.3 302 82-398 8-349 (403)
119 KOG2563 Permease of the major 99.4 5.8E-10 1.3E-14 108.7 26.6 340 52-399 37-408 (480)
120 TIGR00889 2A0110 nucleoside tr 99.4 1.4E-10 3.1E-15 117.0 23.5 163 75-242 229-408 (418)
121 PRK11551 putative 3-hydroxyphe 99.4 1E-10 2.2E-15 117.5 22.1 150 76-232 242-392 (406)
122 PRK09874 drug efflux system pr 99.4 3.7E-11 8.1E-16 120.5 18.9 135 92-234 261-396 (408)
123 PRK05122 major facilitator sup 99.3 1.5E-10 3.3E-15 116.0 22.5 151 73-233 235-386 (399)
124 COG2270 Permeases of the major 99.3 2E-09 4.4E-14 104.4 28.3 310 92-410 61-402 (438)
125 PRK11128 putative 3-phenylprop 99.3 2.6E-10 5.6E-15 113.7 23.3 146 75-230 226-373 (382)
126 TIGR00890 2A0111 Oxalate/Forma 99.3 1.5E-10 3.3E-15 114.2 20.1 144 77-228 228-374 (377)
127 PRK09705 cynX putative cyanate 99.3 5.9E-10 1.3E-14 111.6 24.6 162 73-242 224-387 (393)
128 PRK12382 putative transporter; 99.3 4.5E-10 9.8E-15 112.3 22.7 152 72-233 234-386 (392)
129 TIGR00880 2_A_01_02 Multidrug 99.3 5E-11 1.1E-15 100.0 13.0 133 98-238 7-140 (141)
130 PRK09528 lacY galactoside perm 99.3 4.9E-10 1.1E-14 113.2 20.6 150 81-238 254-405 (420)
131 cd06174 MFS The Major Facilita 99.3 9.8E-10 2.1E-14 107.1 21.9 153 71-231 192-347 (352)
132 PRK03699 putative transporter; 99.3 1.1E-09 2.5E-14 109.6 22.8 147 73-228 224-372 (394)
133 PRK03545 putative arabinose tr 99.3 8.4E-10 1.8E-14 110.3 21.6 149 76-234 227-378 (390)
134 PRK10489 enterobactin exporter 99.3 5.7E-10 1.2E-14 112.6 20.6 158 76-241 245-404 (417)
135 PRK03633 putative MFS family t 99.2 2.3E-09 4.9E-14 106.9 24.2 149 75-233 221-369 (381)
136 PF03092 BT1: BT1 family; Int 99.2 2.6E-08 5.6E-13 100.8 31.9 309 76-403 12-371 (433)
137 TIGR02718 sider_RhtX_FptX side 99.2 1.1E-09 2.5E-14 109.3 21.0 159 65-230 219-385 (390)
138 PRK10642 proline/glycine betai 99.2 3.6E-09 7.9E-14 109.1 25.1 161 74-242 270-435 (490)
139 KOG4686 Predicted sugar transp 99.2 1E-10 2.2E-15 106.9 10.9 342 53-411 37-414 (459)
140 TIGR00883 2A0106 metabolite-pr 99.2 2.2E-09 4.7E-14 106.6 19.1 143 73-223 238-388 (394)
141 TIGR00897 2A0118 polyol permea 99.1 1.6E-08 3.4E-13 101.6 24.3 146 75-230 243-395 (402)
142 KOG2816 Predicted transporter 99.1 5.3E-08 1.2E-12 98.4 27.8 284 99-398 72-378 (463)
143 TIGR01299 synapt_SV2 synaptic 99.1 8.2E-09 1.8E-13 110.1 22.8 137 95-241 601-738 (742)
144 PRK10091 MFS transport protein 99.1 1E-08 2.2E-13 102.3 21.6 141 78-226 223-366 (382)
145 TIGR00892 2A0113 monocarboxyla 99.1 4.8E-09 1.1E-13 107.1 18.1 146 76-228 263-413 (455)
146 PRK15402 multidrug efflux syst 99.1 1.4E-08 3.1E-13 102.0 21.0 122 82-209 244-371 (406)
147 PRK11010 ampG muropeptide tran 99.1 2.9E-08 6.2E-13 102.4 23.5 144 82-233 251-400 (491)
148 TIGR00893 2A0114 d-galactonate 99.1 1.6E-08 3.5E-13 100.1 21.0 148 74-230 235-393 (399)
149 PRK09952 shikimate transporter 99.1 6E-08 1.3E-12 98.6 24.8 152 82-240 279-436 (438)
150 PRK11902 ampG muropeptide tran 99.1 2.4E-08 5.2E-13 100.3 21.4 146 80-233 236-387 (402)
151 TIGR00900 2A0121 H+ Antiporter 99.0 1.9E-08 4.2E-13 98.7 20.1 128 76-208 233-363 (365)
152 PRK10213 nepI ribonucleoside t 99.0 6.2E-08 1.3E-12 97.1 23.0 138 79-226 242-381 (394)
153 COG2814 AraJ Arabinose efflux 99.0 3.5E-08 7.6E-13 96.5 20.3 215 5-233 161-383 (394)
154 TIGR00879 SP MFS transporter, 99.0 1.2E-08 2.5E-13 104.0 17.8 158 75-241 305-475 (481)
155 TIGR00896 CynX cyanate transpo 99.0 7.2E-08 1.6E-12 95.0 22.4 131 74-209 217-349 (355)
156 PF01770 Folate_carrier: Reduc 99.0 4.3E-06 9.2E-11 82.5 33.2 330 55-394 3-384 (412)
157 KOG2325 Predicted transporter/ 99.0 8.8E-08 1.9E-12 95.9 21.5 154 83-242 65-235 (488)
158 PRK10077 xylE D-xylose transpo 99.0 6E-08 1.3E-12 99.6 20.8 159 76-242 293-463 (479)
159 TIGR00895 2A0115 benzoate tran 99.0 8.1E-08 1.8E-12 95.5 21.2 127 74-205 270-397 (398)
160 PRK11663 regulatory protein Uh 99.0 9.6E-08 2.1E-12 97.0 22.0 150 75-233 264-421 (434)
161 TIGR00924 yjdL_sub1_fam amino 99.0 2.9E-08 6.2E-13 101.9 18.2 177 256-436 6-192 (475)
162 PRK03893 putative sialic acid 99.0 6.6E-08 1.4E-12 99.8 20.6 139 75-221 296-438 (496)
163 PRK10054 putative transporter; 98.9 6.6E-08 1.4E-12 96.9 19.3 157 260-421 8-167 (395)
164 TIGR00882 2A0105 oligosacchari 98.9 1.4E-07 3.1E-12 94.4 21.4 136 85-228 250-387 (396)
165 PRK12307 putative sialic acid 98.9 1.2E-07 2.5E-12 95.9 20.0 130 75-209 252-384 (426)
166 PRK09556 uhpT sugar phosphate 98.9 1.5E-07 3.4E-12 96.4 21.1 148 76-228 280-441 (467)
167 PRK15462 dipeptide/tripeptide 98.9 9.7E-08 2.1E-12 97.4 19.0 156 276-434 25-187 (493)
168 PRK10473 multidrug efflux syst 98.9 2E-07 4.2E-12 93.2 20.9 76 82-157 232-308 (392)
169 TIGR00891 2A0112 putative sial 98.9 1E-07 2.2E-12 95.2 18.3 123 82-209 267-391 (405)
170 PF11700 ATG22: Vacuole efflux 98.9 8.9E-07 1.9E-11 90.4 24.4 152 82-241 310-472 (477)
171 TIGR00710 efflux_Bcr_CflA drug 98.9 1.4E-07 2.9E-12 93.7 18.0 133 283-419 28-163 (385)
172 TIGR00792 gph sugar (Glycoside 98.9 2.2E-07 4.8E-12 94.1 19.8 122 87-209 255-381 (437)
173 PF06963 FPN1: Ferroportin1 (F 98.8 4.2E-05 9.2E-10 76.6 35.3 338 54-402 2-408 (432)
174 PRK10207 dipeptide/tripeptide 98.8 2.2E-07 4.7E-12 95.7 18.8 177 257-436 11-194 (489)
175 PRK11195 lysophospholipid tran 98.8 1.6E-07 3.5E-12 94.1 17.4 112 291-409 36-147 (393)
176 PRK09584 tppB putative tripept 98.8 3.8E-07 8.2E-12 94.3 20.2 172 255-429 16-194 (500)
177 PRK11043 putative transporter; 98.8 6.7E-07 1.5E-11 89.6 21.0 125 77-207 226-356 (401)
178 PRK10406 alpha-ketoglutarate t 98.8 1.5E-06 3.3E-11 88.2 22.8 56 74-129 263-319 (432)
179 PRK15075 citrate-proton sympor 98.8 1.2E-06 2.6E-11 88.9 21.8 132 73-209 257-395 (434)
180 PRK11273 glpT sn-glycerol-3-ph 98.8 2.2E-06 4.7E-11 87.5 23.8 149 74-230 273-429 (452)
181 PRK11646 multidrug resistance 98.8 5.9E-07 1.3E-11 90.2 19.1 127 291-421 44-170 (400)
182 PF05977 MFS_3: Transmembrane 98.8 1.4E-06 3E-11 90.1 22.1 145 77-229 241-387 (524)
183 PF07690 MFS_1: Major Facilita 98.7 5.2E-07 1.1E-11 88.1 17.9 127 291-421 30-157 (352)
184 PRK10504 putative transporter; 98.7 6.2E-07 1.3E-11 92.0 18.8 138 279-420 29-169 (471)
185 TIGR00901 2A0125 AmpG-related 98.7 4E-07 8.7E-12 89.7 16.6 109 75-188 230-351 (356)
186 PLN00028 nitrate transmembrane 98.7 1.5E-06 3.2E-11 89.4 20.2 145 77-231 275-428 (476)
187 TIGR01272 gluP glucose/galacto 98.7 5.3E-06 1.1E-10 80.3 22.7 129 84-223 173-302 (310)
188 TIGR00711 efflux_EmrB drug res 98.7 7E-07 1.5E-11 91.8 17.1 133 282-418 24-159 (485)
189 COG2807 CynX Cyanate permease 98.7 8.5E-06 1.8E-10 78.0 22.0 210 8-227 162-376 (395)
190 PRK14995 methyl viologen resis 98.6 2E-06 4.4E-11 88.9 19.4 137 280-420 26-166 (495)
191 PRK15034 nitrate/nitrite trans 98.6 3.4E-06 7.3E-11 85.4 20.3 39 95-133 292-330 (462)
192 TIGR00881 2A0104 phosphoglycer 98.6 3.4E-06 7.3E-11 83.1 19.9 135 76-218 238-379 (379)
193 COG2271 UhpC Sugar phosphate p 98.6 1.2E-06 2.6E-11 85.3 15.9 151 282-436 51-207 (448)
194 TIGR00712 glpT glycerol-3-phos 98.6 2.7E-06 5.8E-11 86.5 19.1 115 282-399 49-167 (438)
195 PF03825 Nuc_H_symport: Nucleo 98.6 1.7E-05 3.7E-10 79.4 24.3 130 75-209 228-365 (400)
196 COG2270 Permeases of the major 98.6 2.2E-06 4.7E-11 83.6 17.1 150 82-239 281-431 (438)
197 PRK08633 2-acyl-glycerophospho 98.6 3.8E-06 8.2E-11 95.8 21.9 132 82-220 261-394 (1146)
198 TIGR02332 HpaX 4-hydroxyphenyl 98.6 2.6E-06 5.7E-11 85.8 18.3 121 282-406 30-152 (412)
199 COG2223 NarK Nitrate/nitrite t 98.6 1.6E-06 3.5E-11 84.4 15.5 205 10-230 171-395 (417)
200 PRK06814 acylglycerophosphoeth 98.6 2.3E-06 4.9E-11 97.5 19.0 137 77-220 248-406 (1140)
201 PRK09669 putative symporter Ya 98.6 3.2E-06 6.9E-11 86.1 17.9 117 92-209 267-389 (444)
202 KOG2504 Monocarboxylate transp 98.6 6.4E-06 1.4E-10 84.7 19.7 146 76-228 320-468 (509)
203 COG0477 ProP Permeases of the 98.5 9.4E-06 2E-10 76.5 19.5 153 68-225 16-174 (338)
204 PRK10133 L-fucose transporter; 98.5 1.9E-05 4.2E-10 80.2 22.6 133 83-226 289-423 (438)
205 TIGR00894 2A0114euk Na(+)-depe 98.5 9.3E-06 2E-10 83.2 20.3 149 75-230 282-444 (465)
206 KOG0569 Permease of the major 98.5 2.4E-05 5.2E-10 79.1 22.0 161 74-243 290-461 (485)
207 PRK15403 multidrug efflux syst 98.5 8.6E-06 1.9E-10 82.2 19.1 125 292-420 50-175 (413)
208 PRK11102 bicyclomycin/multidru 98.5 3.3E-06 7.1E-11 83.7 15.8 132 283-418 14-148 (377)
209 PRK11652 emrD multidrug resist 98.5 8.2E-06 1.8E-10 81.6 18.6 133 283-419 31-166 (394)
210 TIGR00903 2A0129 major facilit 98.5 3.7E-06 8.1E-11 83.4 15.9 150 283-437 14-167 (368)
211 TIGR00886 2A0108 nitrite extru 98.5 5.7E-06 1.2E-10 81.5 17.2 115 280-398 21-138 (366)
212 PF13347 MFS_2: MFS/sugar tran 98.5 4.4E-06 9.5E-11 84.6 16.1 120 84-205 256-381 (428)
213 TIGR00880 2_A_01_02 Multidrug 98.4 2.7E-06 5.8E-11 70.9 11.6 110 301-414 6-116 (141)
214 PRK09848 glucuronide transport 98.4 1.3E-05 2.9E-10 81.7 18.9 125 83-208 258-388 (448)
215 PF12832 MFS_1_like: MFS_1 lik 98.4 1.6E-06 3.6E-11 64.9 8.8 65 64-128 10-74 (77)
216 TIGR00885 fucP L-fucose:H+ sym 98.4 2.2E-05 4.7E-10 79.1 18.7 121 282-405 25-149 (410)
217 TIGR00887 2A0109 phosphate:H+ 98.4 2.5E-05 5.4E-10 80.9 18.5 106 294-402 57-167 (502)
218 PF03137 OATP: Organic Anion T 98.3 8.4E-08 1.8E-12 99.3 -0.9 246 76-328 25-376 (539)
219 TIGR00898 2A0119 cation transp 98.3 1.3E-05 2.7E-10 83.0 14.7 116 292-411 126-241 (505)
220 TIGR00806 rfc RFC reduced fola 98.3 4.4E-05 9.5E-10 76.6 17.0 149 283-436 49-203 (511)
221 PF01306 LacY_symp: LacY proto 98.3 0.00053 1.1E-08 68.2 24.4 141 89-237 259-401 (412)
222 KOG4686 Predicted sugar transp 98.3 4E-05 8.7E-10 70.8 15.1 137 82-223 293-429 (459)
223 PRK10429 melibiose:sodium symp 98.2 6.9E-05 1.5E-09 77.0 18.7 121 87-208 264-393 (473)
224 KOG3626 Organic anion transpor 98.2 2.2E-05 4.8E-10 82.2 13.7 265 57-328 96-463 (735)
225 KOG3764 Vesicular amine transp 98.1 1.6E-05 3.4E-10 77.0 10.1 137 290-430 103-241 (464)
226 KOG3098 Uncharacterized conser 98.1 0.0052 1.1E-07 61.9 28.1 75 96-171 57-131 (461)
227 TIGR00788 fbt folate/biopterin 98.1 4.4E-05 9.5E-10 78.3 13.8 123 82-209 281-414 (468)
228 PTZ00207 hypothetical protein; 98.0 0.0003 6.5E-09 73.4 18.5 149 282-436 49-206 (591)
229 TIGR00805 oat sodium-independe 98.0 4.6E-05 9.9E-10 81.0 12.7 115 291-408 66-230 (633)
230 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.0081 1.8E-07 63.9 26.9 155 74-230 8-176 (654)
231 PF06779 DUF1228: Protein of u 97.9 9.6E-05 2.1E-09 56.0 9.0 74 71-144 9-83 (85)
232 PF03209 PUCC: PUCC protein; 97.9 0.0021 4.7E-08 63.1 20.7 208 19-231 168-393 (403)
233 TIGR01301 GPH_sucrose GPH fami 97.9 0.00064 1.4E-08 69.4 18.0 118 291-408 37-174 (477)
234 PF06813 Nodulin-like: Nodulin 97.9 0.0022 4.7E-08 59.6 19.3 85 73-158 21-113 (250)
235 COG3104 PTR2 Dipeptide/tripept 97.9 0.00028 6.1E-09 70.6 13.8 139 298-438 66-208 (498)
236 COG2211 MelB Na+/melibiose sym 97.8 0.0018 3.8E-08 65.3 19.2 121 85-208 268-396 (467)
237 PRK11462 putative transporter; 97.8 0.002 4.4E-08 65.9 19.7 72 89-160 263-337 (460)
238 KOG1330 Sugar transporter/spin 97.8 9.3E-06 2E-10 80.0 1.9 114 291-408 66-179 (493)
239 KOG0254 Predicted transporter 97.8 0.00028 6E-09 73.4 12.7 124 295-422 91-216 (513)
240 KOG2532 Permease of the major 97.8 0.00035 7.7E-09 71.1 12.8 136 292-430 72-211 (466)
241 PF02487 CLN3: CLN3 protein; 97.7 0.071 1.5E-06 52.9 27.5 44 359-402 344-387 (402)
242 PF06609 TRI12: Fungal trichot 97.6 0.004 8.7E-08 64.9 18.2 106 284-394 68-174 (599)
243 KOG3574 Acetyl-CoA transporter 97.4 0.052 1.1E-06 52.8 21.6 95 71-168 48-160 (510)
244 KOG2615 Permease of the major 97.4 0.0013 2.9E-08 63.5 10.6 112 295-411 70-181 (451)
245 COG0738 FucP Fucose permease [ 97.4 0.025 5.4E-07 55.5 18.8 112 52-164 230-347 (422)
246 PF05978 UNC-93: Ion channel r 97.4 0.013 2.7E-07 50.4 15.2 73 97-170 45-117 (156)
247 KOG0255 Synaptic vesicle trans 97.3 0.0042 9.1E-08 64.6 13.7 112 295-410 120-231 (521)
248 KOG3762 Predicted transporter 97.2 0.011 2.3E-07 60.0 14.2 124 292-419 405-530 (618)
249 KOG0253 Synaptic vesicle trans 97.1 0.002 4.3E-08 62.1 8.4 91 103-202 395-490 (528)
250 PF06813 Nodulin-like: Nodulin 97.0 0.019 4.2E-07 53.3 13.8 119 273-397 16-142 (250)
251 KOG3762 Predicted transporter 97.0 0.0068 1.5E-07 61.3 10.9 147 68-222 385-533 (618)
252 KOG2533 Permease of the major 96.8 0.016 3.5E-07 59.4 12.9 59 75-133 294-357 (495)
253 KOG3810 Micronutrient transpor 96.7 0.35 7.5E-06 46.7 19.2 301 83-394 35-370 (433)
254 KOG2325 Predicted transporter/ 96.5 0.058 1.3E-06 54.7 14.1 104 291-397 69-176 (488)
255 PF00083 Sugar_tr: Sugar (and 96.4 4.2E-05 9.2E-10 77.9 -9.6 102 295-399 48-151 (451)
256 KOG0637 Sucrose transporter an 96.3 0.0066 1.4E-07 60.2 5.6 56 73-128 51-110 (498)
257 TIGR00926 2A1704 Peptide:H+ sy 96.1 0.13 2.9E-06 54.8 14.4 106 296-403 26-141 (654)
258 TIGR00769 AAA ADP/ATP carrier 95.1 4.7 0.0001 41.3 40.1 120 87-206 41-189 (472)
259 KOG0252 Inorganic phosphate tr 95.0 0.033 7.2E-07 55.5 5.0 94 295-391 86-185 (538)
260 PF00854 PTR2: POT family; In 94.1 0.38 8.3E-06 47.6 10.2 107 120-232 2-119 (372)
261 PRK03612 spermidine synthase; 93.6 6.1 0.00013 41.2 18.3 102 292-397 49-160 (521)
262 KOG2563 Permease of the major 92.8 0.59 1.3E-05 46.7 8.9 80 83-162 295-380 (480)
263 PF00854 PTR2: POT family; In 92.8 0.97 2.1E-05 44.7 10.7 83 351-433 34-120 (372)
264 KOG1237 H+/oligopeptide sympor 92.5 16 0.00035 38.5 25.1 152 74-228 58-237 (571)
265 PF05978 UNC-93: Ion channel r 92.3 2.5 5.4E-05 36.2 11.1 87 306-397 50-136 (156)
266 PRK03612 spermidine synthase; 92.2 17 0.00036 38.0 20.7 37 83-119 44-80 (521)
267 PF06779 DUF1228: Protein of u 92.0 0.76 1.6E-05 34.9 6.6 63 282-347 14-78 (85)
268 COG0477 ProP Permeases of the 91.8 4 8.7E-05 37.6 13.2 97 294-393 40-138 (338)
269 PF03092 BT1: BT1 family; Int 90.4 5.5 0.00012 40.4 13.3 129 309-438 40-178 (433)
270 KOG2816 Predicted transporter 89.6 3.5 7.6E-05 42.2 11.0 109 303-418 72-181 (463)
271 PF12832 MFS_1_like: MFS_1 lik 88.1 3 6.4E-05 31.0 7.0 46 283-331 23-70 (77)
272 PF05631 DUF791: Protein of un 88.0 28 0.00061 34.1 21.5 96 292-392 68-168 (354)
273 PF03219 TLC: TLC ATP/ADP tran 84.4 54 0.0012 33.9 31.0 121 87-207 56-205 (491)
274 KOG2601 Iron transporter [Inor 81.1 61 0.0013 32.2 18.6 74 54-128 27-102 (503)
275 TIGR00769 AAA ADP/ATP carrier 79.5 79 0.0017 32.5 20.6 34 370-403 149-182 (472)
276 KOG0637 Sucrose transporter an 71.1 20 0.00043 36.3 8.1 119 281-399 54-192 (498)
277 PF07672 MFS_Mycoplasma: Mycop 65.3 70 0.0015 29.9 9.9 17 250-266 85-101 (267)
278 PF02487 CLN3: CLN3 protein; 62.0 1.8E+02 0.0039 29.2 13.8 85 293-382 59-143 (402)
279 KOG3098 Uncharacterized conser 60.2 2.1E+02 0.0045 29.4 16.2 70 101-171 291-382 (461)
280 PF03137 OATP: Organic Anion T 59.5 2.1 4.6E-05 44.7 -1.1 46 291-339 36-81 (539)
281 COG4262 Predicted spermidine s 58.4 1.9E+02 0.0042 28.5 16.7 91 284-377 34-132 (508)
282 PF02694 UPF0060: Uncharacteri 55.5 72 0.0016 25.2 6.9 39 282-327 47-85 (107)
283 PF01770 Folate_carrier: Reduc 53.4 2.5E+02 0.0055 28.3 14.6 69 369-437 112-183 (412)
284 PRK02237 hypothetical protein; 51.6 1.2E+02 0.0026 24.1 8.8 40 282-327 48-87 (109)
285 PF06963 FPN1: Ferroportin1 (F 45.8 3.4E+02 0.0074 27.6 21.7 49 82-130 286-334 (432)
286 COG5336 Uncharacterized protei 44.4 58 0.0012 25.8 4.8 23 94-116 47-69 (116)
287 PRK06073 NADH dehydrogenase su 37.5 2.3E+02 0.005 23.2 10.6 54 32-87 33-89 (124)
288 PRK11715 inner membrane protei 35.4 4.9E+02 0.011 26.4 12.0 50 292-346 303-352 (436)
289 TIGR00939 2a57 Equilibrative N 33.2 5.3E+02 0.012 26.1 28.6 48 352-399 374-421 (437)
290 KOG3626 Organic anion transpor 32.7 5.8E+02 0.013 27.9 11.8 52 75-126 413-468 (735)
291 PF13000 Acatn: Acetyl-coenzym 31.2 6.3E+02 0.014 26.4 21.6 39 360-398 415-453 (544)
292 PF06123 CreD: Inner membrane 30.8 5.8E+02 0.013 25.9 12.4 22 375-396 370-391 (430)
293 KOG1479 Nucleoside transporter 29.6 5.9E+02 0.013 25.6 22.6 35 353-387 346-380 (406)
294 KOG1479 Nucleoside transporter 21.0 8.6E+02 0.019 24.5 11.0 35 354-389 121-155 (406)
No 1
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=7e-46 Score=350.55 Aligned_cols=293 Identities=34% Similarity=0.522 Sum_probs=262.5
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHH
Q 013096 47 SNSSSFVPFQRNFLLLFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFF 126 (449)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~ 126 (449)
..+++|+++||+++.+|.+++.+||+|+|+++.+|+++|+++.|++.++..++.++++.+++.|.++||+||||.++..+
T Consensus 27 ~~~~~f~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~c 106 (354)
T PF05631_consen 27 STNPAFRRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFC 106 (354)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHH-HHhHHHHHHHHHHHHHH
Q 013096 127 ILHLFVGVWKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMT-FFESAALIGGQVLANWL 205 (449)
Q Consensus 127 ~~~~~~~l~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~-~~~~~~~i~a~~lg~~l 205 (449)
++|+++|++...+|++.|+++|++.|++++..++++|+|++.||++|++|+++++.+++.++ ..|++.+|+++++++++
T Consensus 107 ily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 107 ILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988 67888899999999999
Q ss_pred hcccccCCcchhHHHHHHHHHHHHHHHHhccccCCCCCc--c---hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 013096 206 VGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF--D---DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWI 280 (449)
Q Consensus 206 ~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~--~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
.+.. +.|-..||..++++.+++.+++...|+|+.+++. + +..++.++.+++||+++.+++.++++++.+|.|++
T Consensus 187 ~~~~-~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVf 265 (354)
T PF05631_consen 187 ADWF-GFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVF 265 (354)
T ss_pred HHHh-CCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHhee
Confidence 8866 4455889999999988888888889999987622 1 12345678899999999999999999999999999
Q ss_pred HhhhhhccCCCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHH
Q 013096 281 LWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI 342 (449)
Q Consensus 281 ~~~p~~~~~~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~ 342 (449)
.|+|.+..++++.+.|++|+.+++++|+|+.+.+++..+ +.+.++.+...+.+.++++.+
T Consensus 266 lWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~--~~~~e~~l~~v~~~aa~~l~~ 325 (354)
T PF05631_consen 266 LWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSK--SLRPESLLRYVFAVAAVSLAI 325 (354)
T ss_pred eeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHH
Confidence 999999866678899999999999999999999988874 566666666655555555443
No 2
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-47 Score=337.71 Aligned_cols=356 Identities=29% Similarity=0.441 Sum_probs=306.8
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHH
Q 013096 47 SNSSSFVPFQRNFLLLFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFF 126 (449)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~ 126 (449)
.++++|.++|.+++.+|++.+.+||+|+|+++.+|+++|+.+.|+|.++.+++...++++.+.|.++|+-|||+.++..+
T Consensus 30 ntsssFnsFknnyllVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtyc 109 (454)
T KOG4332|consen 30 NTSSSFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (454)
T ss_pred cCchhHHHHhhhHHHHHHHHHhhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeeh
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHH-hhcCChhhHHHHHHHHH-HHhHHHHHHHHHHHHH
Q 013096 127 ILHLFVGVWKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHE-KQGQRQDILSDTFWLMT-FFESAALIGGQVLANW 204 (449)
Q Consensus 127 ~~~~~~~l~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~-~r~~~~~~l~~~~~~~~-~~~~~~~i~a~~lg~~ 204 (449)
+.|.++|+...+|++-.|+++|++.|++++..++++|+|++.||. +|+++++++...++... ++|++.++++++.|+.
T Consensus 110 itYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~ 189 (454)
T KOG4332|consen 110 ITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNL 189 (454)
T ss_pred HHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999996 88999999999999766 6789999999999999
Q ss_pred HhcccccCCcchhHHHHHHHHHHHHHHHHhccccCCCCC--cch---hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHH
Q 013096 205 LVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA--FDD---YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFW 279 (449)
Q Consensus 205 l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~--~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 279 (449)
+.+.. +.|...||..++.+..++..++...|.|+.+++ +++ +.+...+.+.+|+++..++-++.+++..+|+|+
T Consensus 190 lvd~~-slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFV 268 (454)
T KOG4332|consen 190 LVDTF-SLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFV 268 (454)
T ss_pred HHHHh-ccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheee
Confidence 98877 678889999998888888777888999998763 333 224557889999999999999999999999999
Q ss_pred HHhhhhhccCCCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHh--c--cc-c-hhHHH
Q 013096 280 ILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA--Y--DY-Q-EIGIL 353 (449)
Q Consensus 280 ~~~~p~~~~~~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~--~--~~-~-~~~~~ 353 (449)
+.|+|.+-.+..+.+.|++|+.++.+.++|+.+..|+..+. +.+.+....+.+.+....+.++. . .+ + +....
T Consensus 269 FLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s 347 (454)
T KOG4332|consen 269 FLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSES 347 (454)
T ss_pred eeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHH
Confidence 99999987666778899999999999999999998888642 33333333333333333333222 1 11 1 23346
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHH
Q 013096 354 VALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLL 404 (449)
Q Consensus 354 ~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~ 404 (449)
+++||++..++|+.+|+++-+.++.+|++.|++.+.++|.+.|++++.++.
T Consensus 348 ~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLy 398 (454)
T KOG4332|consen 348 LIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLY 398 (454)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhe
Confidence 789999999999999999999999999999999999999999998876654
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-30 Score=251.98 Aligned_cols=362 Identities=15% Similarity=0.073 Sum_probs=263.9
Q ss_pred HHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhH
Q 013096 65 LASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPS 143 (449)
Q Consensus 65 l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~ 143 (449)
.....|.+..+.+|++.+|+|+|+.+.|.+.+.+..+..+++|+...++||+.||++++....++.++.+ +++++|++.
T Consensus 24 ~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~ 103 (394)
T COG2814 24 AIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAV 103 (394)
T ss_pred HHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3344567778899999999999999999999999999999999999999999999999999999999987 999999999
Q ss_pred HHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHH
Q 013096 144 VWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVF 223 (449)
Q Consensus 144 l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~ 223 (449)
++++|++.|++.|..++...+ +..+. .|+++.+++.+.+..+..++.++|.++|.++.+.+ |||..|+....
T Consensus 104 Ll~aR~~~g~a~G~f~~i~~~-~a~~l----vpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~---GWR~~F~~ia~ 175 (394)
T COG2814 104 LLLARALAGLAHGVFWSIAAA-LAARL----VPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF---GWRATFLAIAV 175 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHH----cCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh---hHHHHHHHHHH
Confidence 999999999999998877543 33333 45556677888877788888888989999988865 99999999888
Q ss_pred HHHHHHHHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHH
Q 013096 224 LSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPS 301 (449)
Q Consensus 224 ~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~ 301 (449)
+.+++.+..++..|.+..+++++....+..+++|+|+++.......+...+.|...++..|.+.+. + ++...+++...
T Consensus 176 l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~ 255 (394)
T COG2814 176 LALLALLLLWKLLPPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLA 255 (394)
T ss_pred HHHHHHHHHHHhCCCccCCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHH
Confidence 888887777777771111111111112345788999998877777776666665545567877643 3 55567888889
Q ss_pred HHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCC
Q 013096 302 LLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPN 381 (449)
Q Consensus 302 ~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~ 381 (449)
++++..+|+.+.||+.| | +.++.+.....+.++.+..+.+..++.+..+....++++..+...+.......+.. +
T Consensus 256 ~Gv~~~~Gn~~gGrl~d---r-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p 330 (394)
T COG2814 256 FGIAGFIGNLLGGRLAD---R-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLA-P 330 (394)
T ss_pred HHHHHHHHHHHHhhhcc---c-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-C
Confidence 99999999999999999 6 66777666655555555544444434333333333455554444444444444433 4
Q ss_pred cchhHHHHhhHHHHHHHHHHHHHHhHH-hhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 013096 382 ELRGGMISLSLAPANAAILLFLLLRGF-YRNIENAAMVAFAALGLFIAAGCMHVLKRWG 439 (449)
Q Consensus 382 ~~rg~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 439 (449)
|.+..+.+++....|+++..+...|+. .++.+.......++...+++.......++++
T Consensus 331 ~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 331 DAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 678899999999999987666666554 4667776666666555555554444444433
No 4
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.98 E-value=2.7e-28 Score=247.14 Aligned_cols=370 Identities=15% Similarity=0.061 Sum_probs=214.6
Q ss_pred HHHHHHHHHHhhhh----hHHHHHHHHHhC---CChHH---HHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHH
Q 013096 60 LLLFSLASVMEGLW----SVFGEYELVYYG---VAKEQ---MMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILH 129 (449)
Q Consensus 60 ~~~~~l~~~~~~~~----~~~~~~l~~~~g---~s~~~---ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~ 129 (449)
+....++.+.|+++ +...+.+.++++ .++.+ ++..++.++++..++++++|+++||+||||++..+.+++
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~ 103 (432)
T PRK10406 24 IVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMM 103 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 33344555555543 344456667774 45553 445667777788899999999999999999999999999
Q ss_pred HHHHH-HHHhcchh--------HHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHH
Q 013096 130 LFVGV-WKSITAHP--------SVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQV 200 (449)
Q Consensus 130 ~~~~l-~~~~~s~~--------~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~ 200 (449)
+++++ +++++|+. .+++.|+++|++.|..++...+ ++.|..+++ +.++..+....+...+.++++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~-~i~e~~p~~----~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 104 CFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSAT-YMSEVAVEG----RKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHH-HHHHhCCCC----cccHHHHHHHHHHHHHHHHHHH
Confidence 98876 77888764 6999999999999998888765 566664332 2233333333333333344443
Q ss_pred HHHHHhcc-----cccCCcchhHHHHHHHHHHHHHHHHhccccCCCCCcch-hhhhhhHhhhcChhHHHHHHHHHHHHHH
Q 013096 201 LANWLVGI-----DVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDD-YRTSFFTYIFGDKRIWLLVLAQACLQFS 274 (449)
Q Consensus 201 lg~~l~~~-----~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 274 (449)
++..+... .+.+|||.+|.+++++.++.. +..+..||+++.++++ .++.+++++++||+.+...+...+....
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 257 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSL 257 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCchHHHhhhcccccHHHHHhhHHHHHHHHHHHHHHHH
Confidence 33322110 013599999998777665543 3444566664432111 1123477888888877655444333222
Q ss_pred HHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHH-HHh-cc-cc
Q 013096 275 IALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFS-IIA-YD-YQ 348 (449)
Q Consensus 275 ~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~-~~~-~~-~~ 348 (449)
.++....|.|.++.+ + +..+.+...........++..+.+++.| |+++|+.+.....+.++... ... .. .+
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~D---r~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSD---KIGRRTSMLCFGSLAALFTVPILSALQNVS 334 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 233345688988754 2 2234455555555666777888899999 77777765544332222211 111 11 11
Q ss_pred hhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHH-HHHHHHHhHHhhhcc-hhHHHHHHHHHHH
Q 013096 349 EIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA-ILLFLLLRGFYRNIE-NAAMVAFAALGLF 426 (449)
Q Consensus 349 ~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~~~l 426 (449)
+....+...++..++.+...+....+.+|.+|++.|++++|+.+...+.. ....+...++.++.+ ....+.+.++..+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 335 SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAV 414 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 11111211222223344444556677889999999999999977655542 222333333444333 3333444444444
Q ss_pred HHHHHHHHHHHh
Q 013096 427 IAAGCMHVLKRW 438 (449)
Q Consensus 427 ~~~~~~~~~~~~ 438 (449)
++.....+++++
T Consensus 415 i~~~~~~~l~~~ 426 (432)
T PRK10406 415 VAFLVSLMLHRK 426 (432)
T ss_pred HHHHHHHHhhhc
Confidence 444444444443
No 5
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=1.8e-27 Score=237.86 Aligned_cols=336 Identities=14% Similarity=0.052 Sum_probs=227.0
Q ss_pred hhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHH
Q 013096 71 GLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANI 149 (449)
Q Consensus 71 ~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~ 149 (449)
.+..|+.|.+.+|+|.|++++|++.+.+.++..+++++.|+++||+||||++..+.+++.++++ +.+++|++++++.|+
T Consensus 26 ~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 105 (390)
T PRK03545 26 FVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRI 105 (390)
T ss_pred HHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3455677888899999999999999999999999999999999999999999999999988876 888999999999999
Q ss_pred HHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHH
Q 013096 150 CLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGI 229 (449)
Q Consensus 150 l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~ 229 (449)
++|++.+...+...+ ++.|. .++++.++.++....+..++.+++|.+++.+.+.. |||+.|++..++.++..
T Consensus 106 ~~G~~~~~~~~~~~~-~i~~~----~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~---gw~~~f~~~~~~~~l~~ 177 (390)
T PRK03545 106 GIAFAHAIFWSITAS-LAIRV----APAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL---GWRTTFLAIGGGALITL 177 (390)
T ss_pred HHHHHHHHHHHHHHH-HHHHh----CChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh---cHHHHHHHHHHHHHHHH
Confidence 999999887766554 33333 34455677888777777888888999998887755 89999998766655554
Q ss_pred HHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHH
Q 013096 230 ICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGAR 306 (449)
Q Consensus 230 ~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~ 306 (449)
....+..||.+++++ + ..+.++++++||+++.......+.....+.. ..+.|.+.++ + ++...+.......++.
T Consensus 178 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~ 254 (390)
T PRK03545 178 LLLIKLLPLLPSEHS-G-SLKSLPLLFRRPALVSLYLLTVVVVTAHFTA-YSYIEPFVQQVAGLSENFATLLLLLFGGAG 254 (390)
T ss_pred HHHHHhCCCCCCCCc-c-hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCccHHHHHHHHHHHHH
Confidence 444444455432221 1 1223567888888765443333332222222 2344544443 2 3445677777778888
Q ss_pred HHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhH
Q 013096 307 MLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGG 386 (449)
Q Consensus 307 ~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~ 386 (449)
++|+.+.+++.| |+++++. ..+..+.+.+........++.+.......+++++.+...+...+...+..| +.|++
T Consensus 255 ~~g~~~~g~l~d---r~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~ 329 (390)
T PRK03545 255 IIGSVLFSRLGN---RHPSGFL-LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDV 329 (390)
T ss_pred HHHHHHHHHHhh---ccchhHH-HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHH
Confidence 999999999999 6665443 333333333322221112233333344445566655555666677777766 67899
Q ss_pred HHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHH
Q 013096 387 MISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAA 422 (449)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 422 (449)
++|..+...+.+...++.. |.+.+..+.+..+.+.+
T Consensus 330 ~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~ 366 (390)
T PRK03545 330 AMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGA 366 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHH
Confidence 9998887777765555555 44556677665554443
No 6
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=4.7e-28 Score=239.62 Aligned_cols=324 Identities=14% Similarity=0.036 Sum_probs=213.1
Q ss_pred hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHH
Q 013096 72 LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVWKS-ITAHPSVWVANIC 150 (449)
Q Consensus 72 ~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~~~-~~s~~~l~~~R~l 150 (449)
..+|..|.+.+|+|+|++|+|++.+.+++++.+++++.|+++||+|||++++.+......+.++.. .+|++++++.|++
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 88 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLL 88 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 357888899999999999999999999999999999999999999999987765555544434333 3799999999999
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII 230 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~ 230 (449)
+|+|.+...+. .+ ...| .+++++.+++.+....++.++.++++.++.++.+.+ |||+.|.+...+.++..+
T Consensus 89 ~G~g~~~~~~~-~~-~~~~----~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~---gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 89 AALGQPFLLNA-FA-PAAS----QIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG---GLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHhHhHHHHHH-HH-HHHH----HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---chHHHHHHHHHHHHHHHH
Confidence 99999863322 22 2233 245667788888888888888899999999988754 999999885555444444
Q ss_pred HHHhccccCCCCCcc--h--hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-CCccchHHHHHHHHHH
Q 013096 231 CVSRGWTENPKMAFD--D--YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-GREVHLGLIFPSLLGA 305 (449)
Q Consensus 231 ~i~~~~~e~~~~~~~--~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~g~i~~~~~~~ 305 (449)
+.++..||+++++++ + ...++++++++||+++.+.+...+.....+.+ ..|.|.++++ +.+.+.+..... .
T Consensus 160 ~~~~~lp~~p~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~-~~wlp~~L~~~g~s~~~~~~~~l---~ 235 (368)
T TIGR00903 160 LVLAALPALPFQAAEGFGFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNL-AIWLEAALRPAGLEDIAGDAVAL---A 235 (368)
T ss_pred HHHHHcCCCCCCCCCCcchHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCChHHHHHHHH---H
Confidence 455567876543211 1 11135788999999988877776666665544 6799999865 222223333222 2
Q ss_pred HHHhhhHHHHHhcCCCCCCchhHHHH-HHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcch
Q 013096 306 RMLGSTVFPWLISGPSSFRTEDCLLY-AFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELR 384 (449)
Q Consensus 306 ~~lg~~l~~~l~~~~~~~~~~~~l~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~r 384 (449)
...|....+++.||.+|.++|+.... ...+.++.+.......+ ....+..+++.+++.+...+..+++.+|.+|+|.|
T Consensus 236 ~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~r 314 (368)
T TIGR00903 236 ILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELN-RLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELH 314 (368)
T ss_pred HHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccc-cHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhc
Confidence 22333334566664333333333222 22223333322232222 22223333444555666667788889999999999
Q ss_pred hHHHHhhHHHHHHHHHHHHH-HhHHh
Q 013096 385 GGMISLSLAPANAAILLFLL-LRGFY 409 (449)
Q Consensus 385 g~~~~~~~~~~~~~~~~~~~-~g~~~ 409 (449)
|++.|+.+...+++...++. .+.+.
T Consensus 315 gt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 315 GKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHHh
Confidence 99999998877776533333 34444
No 7
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=4.1e-27 Score=237.03 Aligned_cols=328 Identities=12% Similarity=0.058 Sum_probs=217.6
Q ss_pred HhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHH
Q 013096 69 MEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVA 147 (449)
Q Consensus 69 ~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~ 147 (449)
...+..|.+|++.+++|.|+++.++..+.++++..+++++.|+++||+||||+++.+..++.++++ +..++|++.++++
T Consensus 31 ~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~ 110 (413)
T PRK15403 31 TTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIA 110 (413)
T ss_pred HHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 334567778888899999999999999999999999999999999999999999999999988776 7889999999999
Q ss_pred HHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHH
Q 013096 148 NICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSIL 227 (449)
Q Consensus 148 R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~ 227 (449)
|+++|++.+...+...+ .+.| .+++++..+.++.......++++++|.+++.+.+.. |||+.|++..+..++
T Consensus 111 r~l~Gi~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~---gw~~~f~~~~~~~~i 182 (413)
T PRK15403 111 RFIQGTSICFIATVGYV-TVQE----AFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV---HWKVLFAIIAVMGLI 182 (413)
T ss_pred HHHHHHHHHHHHHHHHH-HHHH----hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHH
Confidence 99999998754433221 2222 245556677777777677778888999998887654 899999987766555
Q ss_pred HHHHHHhccccCCCCCcch----hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccCC---CccchHHHHH
Q 013096 228 GIICVSRGWTENPKMAFDD----YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG---REVHLGLIFP 300 (449)
Q Consensus 228 ~~~~i~~~~~e~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~g~i~~ 300 (449)
+.+...+..||++++++++ ...++++.+++||+++...+...+.....+.+ ..+.|.++++. ++.+.++.+.
T Consensus 183 ~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~-~~~~P~~l~~~~g~s~~~~gl~~~ 261 (413)
T PRK15403 183 AFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSW-VAVSPVILIDAGGMTTSQFAWTQV 261 (413)
T ss_pred HHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHhChHHHHHhcCCCHHHHHHHHH
Confidence 5544444567765432211 12345788999999987666555544444433 34578777642 3445777776
Q ss_pred HHHHHHHHhhhHHHHHhcCCCCCCchhHHHHH--HHHHHHHHHHHh--cccchhHHHHHHHHHHHHHhhhhhhHHHHHHh
Q 013096 301 SLLGARMLGSTVFPWLISGPSSFRTEDCLLYA--FVVLGFVFSIIA--YDYQEIGILVALFCLFHACVGLILPSLARLRT 376 (449)
Q Consensus 301 ~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~--~~~~~~~l~~~~--~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~ 376 (449)
....+.++++.+.+++.++ +. .+|..... ....+..+.... ...++.+......++++++.+...|+..+...
T Consensus 262 ~~~~~~~i~~~l~~~~~~~--~~-~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al 338 (413)
T PRK15403 262 PVFGAVIVANAIVARFVKD--PT-EPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTL 338 (413)
T ss_pred HHHHHHHHHHHHHHHHhcc--CC-chhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 6667778888888887652 23 23332111 111222222111 11222222344556677888888888775332
Q ss_pred ccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHh
Q 013096 377 MYVPNELRGGMISLSLAPANAAILLFLLLRGFY 409 (449)
Q Consensus 377 ~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~ 409 (449)
+. ++..+|++.++.+.........+...+++.
T Consensus 339 ~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~ 370 (413)
T PRK15403 339 FS-NNLPKGTVSASLNMVILMVMAVSVEIGRWL 370 (413)
T ss_pred cc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 233478888887776655543333334444
No 8
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=1.3e-26 Score=231.86 Aligned_cols=338 Identities=13% Similarity=0.062 Sum_probs=228.9
Q ss_pred HhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHH
Q 013096 69 MEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVA 147 (449)
Q Consensus 69 ~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~ 147 (449)
.+....+++|++.+++|.|++|++...+...+...+++++.|+++||+||||+++.+.++.+++++ +..++|++.+++.
T Consensus 35 ~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (394)
T PRK10213 35 VEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIG 114 (394)
T ss_pred HHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHH
Confidence 344455677888899999999999999999999999999999999999999999999999988776 7788999999999
Q ss_pred HHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHH
Q 013096 148 NICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSIL 227 (449)
Q Consensus 148 R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~ 227 (449)
|+++|++.+...+...+ ++.|. +++++.++..+......+++.+++|.+++++.+.+ +||+.|++..++.++
T Consensus 115 r~l~G~~~g~~~~~~~~-~i~~~----~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~---gw~~~f~~~~~l~~~ 186 (394)
T PRK10213 115 RACLGLALGGFWAMSAS-LTMRL----VPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI---GWRNVFNAAAVMGVL 186 (394)
T ss_pred HHHHHHhhHHHHHHHHH-HHHHH----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHHHH
Confidence 99999999987776554 34443 45556777777777777788889999999988755 899999987665555
Q ss_pred HHHHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHHHHHH
Q 013096 228 GIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPSLLGA 305 (449)
Q Consensus 228 ~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~~~~ 305 (449)
+.+.+.+..||++++++ ...++.+++++||+++...+...+.....+.+.....|.+.++ + +....+..+...+++
T Consensus 187 ~~l~~~~~~p~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~ 264 (394)
T PRK10213 187 CIFWIIKSLPSLPGEPS--HQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIA 264 (394)
T ss_pred HHHHHHHHCCCCCcccc--cchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHH
Confidence 54444444566543221 1122355778888887654443333333333322234666543 3 344567878888888
Q ss_pred HHHhhhHHHHHhcCCCCCCchhHHHHHHHH-HHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcch
Q 013096 306 RMLGSTVFPWLISGPSSFRTEDCLLYAFVV-LGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELR 384 (449)
Q Consensus 306 ~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~r 384 (449)
.++|+.+.+++.| |.+ ++.+.....+ .+..+...... ++.+......++.+++.+...+...+..++..|+ ++
T Consensus 265 ~iig~~~~~~l~~---r~~-~~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~ 338 (394)
T PRK10213 265 SFVGTSLSSFILK---RSV-KLALAGAPLVLAVSALVLTLWG-SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-QA 338 (394)
T ss_pred HHHHHHHHHHHHh---ccc-hhHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-cH
Confidence 9999999999998 433 3333332222 22222222222 2233334455667778888888888888888884 45
Q ss_pred hHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHH
Q 013096 385 GGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAA 422 (449)
Q Consensus 385 g~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 422 (449)
++..+......+.+...++.. |.+.+..+....+..+.
T Consensus 339 ~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~ 377 (394)
T PRK10213 339 EKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSG 377 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHH
Confidence 666666555566655444444 44556566555444443
No 9
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=3.5e-27 Score=236.39 Aligned_cols=357 Identities=14% Similarity=0.078 Sum_probs=223.9
Q ss_pred HHHHHHHHHhhhhhHHHHH-HHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh
Q 013096 61 LLFSLASVMEGLWSVFGEY-ELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI 138 (449)
Q Consensus 61 ~~~~l~~~~~~~~~~~~~~-l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~ 138 (449)
...++..++.++..|+++. +.+++|.|+.++|++.+...++..+++++.|+++||+||||+++.+.+++.++++ +..+
T Consensus 22 ~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~ 101 (399)
T PRK05122 22 MFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLA 101 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHh
Confidence 3345667777788888876 4568999999999999999999999999999999999999999999888876543 3322
Q ss_pred --------cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccc
Q 013096 139 --------TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDV 210 (449)
Q Consensus 139 --------~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~ 210 (449)
.+++.+++.|+++|++.+...+...++. .|. .++++.+++.+........+.++++.+++++.+..
T Consensus 102 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~-~~~----~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~- 175 (399)
T PRK05122 102 GLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWG-IGR----VGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG- 175 (399)
T ss_pred hhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHH-Hhh----cChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc-
Confidence 2567899999999999998777665533 232 23344555666655555666778888888887755
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Q 013096 211 KKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG 290 (449)
Q Consensus 211 ~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 290 (449)
||+..+.+.....++..+.. +..||.++++++ +.++++.+++ .+.......+.... +.....|.|.+..+.
T Consensus 176 --g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 246 (399)
T PRK05122 176 --GLAGLGLLIMLLALLGLLLA-RPRPAVPPVKGE---RLPFRRVLGR--VWPYGMGLALASIG-FGTIATFITLYYAAR 246 (399)
T ss_pred --cHHHHHHHHHHHHHHHHHHH-hcCCCCCCCCcc---chhHHHHHHH--HHHHHHHHHHHHHH-HHHHHHHHHHHHHHc
Confidence 88888876555544433322 223332221111 1123333322 12111111111111 111233455554432
Q ss_pred CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhH
Q 013096 291 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPS 370 (449)
Q Consensus 291 ~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~ 370 (449)
.....+.....+.++.+++..+.+++.| |++++|.+..+..+.++........+ +.+..+...++.+++.+..+|.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~---r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~ 322 (399)
T PRK05122 247 GWDGAALALTLFGVAFVGARLLFGNLIN---RLGGLRVAIVSLLVEILGLLLLWLAP-SPWMALIGAALTGFGFSLVFPA 322 (399)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhHHHHHHH
Confidence 1123455556667788889999999999 67777766655544444444333333 3333344455667778878888
Q ss_pred HHHHHhccCCCcchhHHHHhhHHHHHHHH-HHHHHHhHHhhhcchhHHHHHHHHHHHHHHHHHHHHH
Q 013096 371 LARLRTMYVPNELRGGMISLSLAPANAAI-LLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVLK 436 (449)
Q Consensus 371 ~~~~~~~~~p~~~rg~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 436 (449)
......+..|+|.||+++|+.+...+.+. +..++.|.+.+..+....+....+..+++......++
T Consensus 323 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 323 LGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 87778889999999999999888777664 3344445555666665554444433333333333333
No 10
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=3.6e-27 Score=236.03 Aligned_cols=339 Identities=10% Similarity=0.017 Sum_probs=222.5
Q ss_pred hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHH
Q 013096 72 LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANIC 150 (449)
Q Consensus 72 ~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l 150 (449)
..+|..|.+.+|+|+|..|++++.+.+.++..+++++.|+++||+||||+++.+..+++++.+ +++++|++.+++.|++
T Consensus 27 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l 106 (393)
T PRK09705 27 SVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALL 106 (393)
T ss_pred ccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHH
Confidence 356888999999999999999999999999999999999999999999999999999999887 8899999999999999
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII 230 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~ 230 (449)
+|+|.+...+...+ ++.+ .++ ++.+++++....+...+..+++.+++++.++. .+||..+.+.....++...
T Consensus 107 ~Gig~~~~~~~~~~-~~~~----~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~--~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 107 GGVGIGIIQAVMPS-VIKR----RFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS--ETWYQTLAWWALPAVVALF 178 (393)
T ss_pred HHhHHHHHhhhhhH-HHHH----Hcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHH
Confidence 99999987665543 3332 233 34566777766666666777777777776643 3788776653333332222
Q ss_pred HHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHHHHHHHHH
Q 013096 231 CVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPSLLGARML 308 (449)
Q Consensus 231 ~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~l 308 (449)
......++.+++++++ + ...++.+++++.+...+...+.... +.....|.|.++++ + +..+.|.....+.++.++
T Consensus 179 ~~~~~~~~~~~~~~~~-~-~~~~~~l~~~~~~~l~~~~~~~~~~-~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~ 255 (393)
T PRK09705 179 AWWWQSAREVASSHKT-T-TTPVRVVFTPRAWTLGVYFGLINGG-YASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAA 255 (393)
T ss_pred HHHHHhcCCCccccCC-C-cCCcccccCHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHH
Confidence 2221112221111111 1 1123456677777655544444333 33345678877764 2 344567778888889999
Q ss_pred hhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCC-CcchhHH
Q 013096 309 GSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVP-NELRGGM 387 (449)
Q Consensus 309 g~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p-~~~rg~~ 387 (449)
|+.+.+++.| |.++++....+..+.+++.......+++... + ..++.+++.+...|.......+..| +++||+.
T Consensus 256 g~~~~g~l~~---r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~ 330 (393)
T PRK09705 256 GALLMPAMAR---HQDRRKLLMLALVLQLVGFCGFIWLPLQLPV-L-WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKL 330 (393)
T ss_pred HHHHHHHHHh---hccchHHHHHHHHHHHHHHHHHHHccchHHH-H-HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHH
Confidence 9999999999 6777776665544444333322222222111 1 2234466666777776666566664 6789999
Q ss_pred HHhhHHHHHHHHHHHHHH-hHHhhhcc-hhHHHHHHHHHHH
Q 013096 388 ISLSLAPANAAILLFLLL-RGFYRNIE-NAAMVAFAALGLF 426 (449)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~l 426 (449)
+|+.+...+++...++.. |.+.+..+ +...+.+.++..+
T Consensus 331 ~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~ 371 (393)
T PRK09705 331 VAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVV 371 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 999888777765445444 55556554 4554444443333
No 11
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=1.3e-26 Score=231.87 Aligned_cols=363 Identities=14% Similarity=0.064 Sum_probs=240.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH
Q 013096 58 NFLLLFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK 136 (449)
Q Consensus 58 ~~~~~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~ 136 (449)
.++...++..++|++.....+.+.++++.++.+.+++.+.+.+++.+++|+.|+++||+||||+++++.++++++++ +.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 34555667777787766666677789999999999999999999999999999999999999999999999987765 55
Q ss_pred HhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcch
Q 013096 137 SITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVP 216 (449)
Q Consensus 137 ~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~ 216 (449)
.+++. ++.|+++|++.+...|+..+ ++.|. +++++++++++..+.....+.++||.+++++.+. .|+.
T Consensus 87 ~~~~~---~~~r~l~G~~~a~~~pa~~a-~i~~~----~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~----~~~~ 154 (393)
T PRK11195 87 FGIHP---LLAYGLVGIGAAAYSPAKYG-ILTEL----LPGEKLVKANGWMEGSTIAAILLGTVLGGALADP----HAEA 154 (393)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHH----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH
Confidence 55553 78999999999998888765 44444 5666788899988877778889999999998763 4556
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCCCCc--c-h------hhhhhhHhhhcChhHHHHHHHHHHHHHHHH---HHHHHhhh
Q 013096 217 SSTASVFLSILGIICVSRGWTENPKMAF--D-D------YRTSFFTYIFGDKRIWLLVLAQACLQFSIA---LFWILWAP 284 (449)
Q Consensus 217 ~f~~~~~~~~~~~~~i~~~~~e~~~~~~--~-~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p 284 (449)
++.+.....+++.+ ..+..||++++++ + + ..+++++.+++||.+........+...... .....|.|
T Consensus 155 ~~~i~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (393)
T PRK11195 155 ALAVCALIYLLAAL-FNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAP 233 (393)
T ss_pred HHHHHHHHHHHHHH-HHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66554443333322 3345566542211 1 1 112345677888876543332222222111 11122334
Q ss_pred hhccCCCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHh
Q 013096 285 TLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACV 364 (449)
Q Consensus 285 ~~~~~~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 364 (449)
..+ +.++.+.|.+.....++.++|+.+.+++.| |.+.++....+. +.++........+ +.+.......+.+++.
T Consensus 234 ~~l-g~s~~~~G~~~~~~~~g~i~g~~~~~~l~~---~~~~~~~~~~g~-~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 234 VAL-GITLNQPAYLQAVVAIGIAVGAGAAARLVT---LETVLRVLPAGI-LMGLVVLLMALQH-SLLPAYPLLILIGALG 307 (393)
T ss_pred HHc-CCChhHHHHHHHHHHHHHHHHHHHHHHHhc---CCcccchHHHHH-HHHHHHHHHHHHh-HHHHHHHHHHHHHHhh
Confidence 333 224566888888888999999999999988 555555555443 2333222222222 2333334444667777
Q ss_pred hhhhhHHHHHHhccCCCcc-hhHHHHhhHHHHHHHHHHHHHHhHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 013096 365 GLILPSLARLRTMYVPNEL-RGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVLKRWG 439 (449)
Q Consensus 365 g~~~p~~~~~~~~~~p~~~-rg~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 439 (449)
++..+..++..++..|+|. +|++.++.+...+++...+....+..+..+......+.++++++........|.++
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLVALAMALLWRWHR 383 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777788888766655 79999998888888755554443444566666666777777776655444444433
No 12
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=3.4e-27 Score=232.46 Aligned_cols=335 Identities=15% Similarity=0.147 Sum_probs=238.2
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh
Q 013096 60 LLLFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI 138 (449)
Q Consensus 60 ~~~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~ 138 (449)
+...++..+++.+..+..|....+++.++.+++++.+...++..+++++.|+++||+||||+++.+.++..+++. ....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 444556667777777777776678999999999999999999999999999999999999999998888776554 5555
Q ss_pred c-----chhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCC
Q 013096 139 T-----AHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKG 213 (449)
Q Consensus 139 ~-----s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g 213 (449)
+ |++.+++.|+++|++.+...+..++ ++.|. .++++.++.++.......++.+++|.+++++.+.. +
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~---g 156 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQA-MLPDL----VPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL---G 156 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHhc----CCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh---h
Confidence 5 9999999999999999987777655 33333 34556777888877788888889999999988765 8
Q ss_pred cchhHHHHHHHHHHHHHHHHh-ccccCCCCCcc----h---hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 013096 214 VVPSSTASVFLSILGIICVSR-GWTENPKMAFD----D---YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPT 285 (449)
Q Consensus 214 ~~~~f~~~~~~~~~~~~~i~~-~~~e~~~~~~~----~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 285 (449)
||+.|++..+..+++.+.... ..||.++++++ + ..++.++.+++||+++.......+...........+.|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (365)
T TIGR00900 157 IKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPY 236 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999998766554444333322 23333221111 1 112446778888888766554444443333332356777
Q ss_pred hccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Q 013096 286 LVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHA 362 (449)
Q Consensus 286 ~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 362 (449)
+.++ + ++.+.+.......++.+++..+.+++.| |.++++....+..+.++++....+.+++.+......++.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (365)
T TIGR00900 237 VQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGR---YFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGV 313 (365)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHH---HhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHH
Confidence 7654 2 4456787777788888999999999998 67767666655544554444443333223344455566778
Q ss_pred HhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH
Q 013096 363 CVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL 405 (449)
Q Consensus 363 ~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~ 405 (449)
+.+...+...++.+|..|+|+||++.|+.+...+++...++..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 356 (365)
T TIGR00900 314 GYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLIL 356 (365)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999999999988877765444443
No 13
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=9.2e-27 Score=233.51 Aligned_cols=335 Identities=16% Similarity=0.121 Sum_probs=225.2
Q ss_pred HHHHHHhhhhhHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcch
Q 013096 64 SLASVMEGLWSVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAH 141 (449)
Q Consensus 64 ~l~~~~~~~~~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~ 141 (449)
++...+.....|+.+..+ +++|.|+.++|.+.+...+...+.+++.|+++||+|||+++..+.++..++++ +...+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~ 99 (400)
T PRK11646 20 MLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEP 99 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccH
Confidence 344455555667765544 58999999999999998899888899999999999999999999999988776 6778899
Q ss_pred hHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHH
Q 013096 142 PSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTAS 221 (449)
Q Consensus 142 ~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~ 221 (449)
+.+++.|+++|++.+...+..+++. .|. .++++.++.++.......++..++|.+++++. .+ +||+.|++.
T Consensus 100 ~~l~~~~~l~g~~~~~~~~~~~~~~-~~~----~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~---g~~~~f~~~ 170 (400)
T PRK11646 100 WLLWLSCILSGLGGTLFDPPRTALV-IKL----IRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY---DFRLVCATG 170 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHh----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh---hHHHHHHHH
Confidence 9999999999999887766655533 332 34556778888877787888889999999887 44 889999886
Q ss_pred HHHHHHHHHHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CCccchHHHH
Q 013096 222 VFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--GREVHLGLIF 299 (449)
Q Consensus 222 ~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~g~i~ 299 (449)
....++..+......||.+.++.++..+++++++++||+++...+....+... +.....+.|.+.++ +++...+..+
T Consensus 171 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~g~l~ 249 (400)
T PRK11646 171 AVLFVLAAAFNAWLLPAYKLSTVRTPVREGMTRVLRDKRFVTYVLTLTGYYML-AVQVMLMLPIMVNDIAGSPSAVKWMY 249 (400)
T ss_pred HHHHHHHHHHHHHhCCcccccccchhhHHHHHHHHcCchHHHHHHHHHHHHHH-HHHHHHhhhhhHHhhcCCchHHHHHH
Confidence 65544443333333455322221222334577888998877654433222221 22223467887665 2345567666
Q ss_pred HHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccC
Q 013096 300 PSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYV 379 (449)
Q Consensus 300 ~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~ 379 (449)
+...+....+....+++.|| |++.++.+..+..+.++.+......+ +.+......++++.+.+...|..+++..+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~ 326 (400)
T PRK11646 250 AIEACLSLTLLYPIARWSEK--RFRLEHRLMAGLLIMSLSMFPIGMVS-NLQQLFTLICLFYIGSIIAEPARETLSASLA 326 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hcchhHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHccHHHHHHhcC
Confidence 66555544444455666653 55555555555444444444333332 2233333344566677777888889999999
Q ss_pred CCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhh
Q 013096 380 PNELRGGMISLSLAPANAAILLFLLL-RGFYRN 411 (449)
Q Consensus 380 p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~ 411 (449)
|+++||+++|+.+...+++...++.. |.+.+.
T Consensus 327 p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 327 DARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred CcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 99999999999988877775555544 444343
No 14
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=2e-26 Score=231.60 Aligned_cols=330 Identities=14% Similarity=0.076 Sum_probs=218.9
Q ss_pred hhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHH
Q 013096 71 GLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANI 149 (449)
Q Consensus 71 ~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~ 149 (449)
.+..|..+.+.+++|.|+.+++...+...++..+++++.|+++||+||||+++.+..+..++++ +..+++++.+++.|+
T Consensus 30 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 109 (406)
T PRK15402 30 DMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRF 109 (406)
T ss_pred hhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 3455667778889999999999999999999999999999999999999999999888888776 778899999999999
Q ss_pred HHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHH
Q 013096 150 CLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGI 229 (449)
Q Consensus 150 l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~ 229 (449)
++|++.+...+...+ .+.|. +++++..+..+........+..++|.+++++.+.. +||+.|++.++..+++.
T Consensus 110 l~G~~~~~~~~~~~~-~i~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~---~w~~~~~~~~~~~~~~~ 181 (406)
T PRK15402 110 LQGIGLCFIGAVGYA-AIQES----FEEADAIKITALMANVALLAPLLGPLVGAALIHVL---PWRGMFVLFAALAALSF 181 (406)
T ss_pred HHHhHhhhHHHHHHH-HHHHH----hChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---CccHHHHHHHHHHHHHH
Confidence 999998876655433 23333 33334445555544444556678888888887754 88999987666655554
Q ss_pred HHHHhccccCCCCCcc----hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHH
Q 013096 230 ICVSRGWTENPKMAFD----DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSL 302 (449)
Q Consensus 230 ~~i~~~~~e~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~ 302 (449)
+...+..||+++++++ +...++++.+++||+++...+...+.....+.+ ..+.|.++.+ + ++.+.+......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~g~~~~~~g~~~~~~ 260 (406)
T PRK15402 182 FGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAW-IALSPVILISGEQLSSYEYGLLQVPV 260 (406)
T ss_pred HHHHHhCCCCCccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHhCCCHHHHHHHHHHH
Confidence 4444456766433211 122345778899998887665444443322222 3346766543 2 334466665556
Q ss_pred HHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhc----ccchhHHHHHHHHHHHHHhhhhhhHHHHHHhcc
Q 013096 303 LGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAY----DYQEIGILVALFCLFHACVGLILPSLARLRTMY 378 (449)
Q Consensus 303 ~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~ 378 (449)
.++..+|..+.+++.| |+++++.+..+....++++..... ..++.+......++.+++.+...|..+.....
T Consensus 261 ~~~~~~g~~~~g~l~~---r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~- 336 (406)
T PRK15402 261 FGALIAGNLTLARLTS---RRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF- 336 (406)
T ss_pred HHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-
Confidence 6678889999999999 777777666555444333332221 11223334455556677777777766665543
Q ss_pred CCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcc
Q 013096 379 VPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIE 413 (449)
Q Consensus 379 ~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~ 413 (449)
.++++||++.+..+...+.+...+... +.+.+..+
T Consensus 337 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 337 SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG 372 (406)
T ss_pred hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 355889999999887776654334333 44444443
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=2.7e-26 Score=230.49 Aligned_cols=326 Identities=17% Similarity=0.136 Sum_probs=219.0
Q ss_pred hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHH
Q 013096 73 WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICL 151 (449)
Q Consensus 73 ~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~ 151 (449)
.++..|.+.+++|.|+++++.+.+...++..+++++.|+++||+||||++..+.++..+..+ +.+++|++.+++.|+++
T Consensus 34 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 113 (406)
T PRK11551 34 AGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLT 113 (406)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 45667788899999999999999999999999999999999999999999999888877665 77889999999999999
Q ss_pred HhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHH
Q 013096 152 SLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIIC 231 (449)
Q Consensus 152 Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~ 231 (449)
|++.+...+...+ ++.|. +++++.++.++....+..++..+++.++..+.+.. +||+.|++...+.++..+.
T Consensus 114 G~~~~~~~~~~~~-~~~~~----~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK11551 114 GVGLGGALPNLIA-LTSEA----VGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA---AWRHIFYVGGVGPLLLVPL 185 (406)
T ss_pred HhhHHHHHHHHHH-HHHHH----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc---CHHHHHHHHHHHHHHHHHH
Confidence 9999887766544 34443 34445666777766666677778888887776644 8999998765544444333
Q ss_pred HHhccccCCCCC-c---chhhhhhhHhhhcCh---hHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHHH
Q 013096 232 VSRGWTENPKMA-F---DDYRTSFFTYIFGDK---RIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPSL 302 (449)
Q Consensus 232 i~~~~~e~~~~~-~---~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~ 302 (449)
.....||+++++ + ++.+++..+.+++++ +.+...... +.....+.....|.|.+.++ + ++...+......
T Consensus 186 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~ 264 (406)
T PRK11551 186 LMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATLLLWISY-FFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAF 264 (406)
T ss_pred HHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHH
Confidence 444457754321 1 111111223333332 222222211 11122223345578887764 2 345577777778
Q ss_pred HHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCc
Q 013096 303 LGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNE 382 (449)
Q Consensus 303 ~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~ 382 (449)
.++.+++..+.+++.| |+++++.+.......++++......+ +.+......++.+++.+...+...++.+|.+|++
T Consensus 265 ~~~~~~~~~~~g~l~d---r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 340 (406)
T PRK11551 265 NIGGALGSLLIGALMD---RLRPRRVVLLIYAGILASLAALAAAP-SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQ 340 (406)
T ss_pred HHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchh
Confidence 8888999999999999 77777766554444444433333333 2222333334445555556777888889999999
Q ss_pred chhHHHHhhHHHHHHHHHHHHHH-hHHhhh
Q 013096 383 LRGGMISLSLAPANAAILLFLLL-RGFYRN 411 (449)
Q Consensus 383 ~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~ 411 (449)
+||++.|+.+...+++...++.. |.+.+.
T Consensus 341 ~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 341 VRGTGVGAAVAVGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred hhhhhhhHHHHhhhHHHHHHhhhHhhhhcc
Confidence 99999999888777765555544 444443
No 16
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=8.1e-27 Score=246.40 Aligned_cols=378 Identities=16% Similarity=0.114 Sum_probs=243.4
Q ss_pred hhhhHHHHHHHHHHHHHhhh----hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHH
Q 013096 53 VPFQRNFLLLFSLASVMEGL----WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFIL 128 (449)
Q Consensus 53 ~~~~~~~~~~~~l~~~~~~~----~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~ 128 (449)
.+.++..+.++.++.+.+++ .++.+|.+..++|+++.+.+++.++.+++.+++++++|+++||+|||+++++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45566665566666666654 45566777789999999999999999999999999999999999999999999988
Q ss_pred HHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Q 013096 129 HLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVG 207 (449)
Q Consensus 129 ~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~ 207 (449)
++++++ +.++++++.++++|+++|++.+...+...+ ++.|. .+.+..++.++.......++.++++.++.++.+
T Consensus 242 ~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~-~isE~----~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~ 316 (742)
T TIGR01299 242 NGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFS-YFAEF----LAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIP 316 (742)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888765 778899999999999999999988777654 55554 344455666666655666666667766665554
Q ss_pred cc----------ccCCcchhHHHHHHHHHHHHHHHHhccccCCCC---C-c-ch------------hh------------
Q 013096 208 ID----------VKKGVVPSSTASVFLSILGIICVSRGWTENPKM---A-F-DD------------YR------------ 248 (449)
Q Consensus 208 ~~----------~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~---~-~-~~------------~~------------ 248 (449)
.+ ...+||+.|.+.++..++.++ ..+..||+++. + + ++ .+
T Consensus 317 ~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll-~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~ 395 (742)
T TIGR01299 317 HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIG-ALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVN 395 (742)
T ss_pred hccchhccccccccccHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHH
Confidence 32 013688888887766655543 33456887531 0 0 00 00
Q ss_pred ----------------h--------------------hhhHhhhcCh---hHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 013096 249 ----------------T--------------------SFFTYIFGDK---RIWLLVLAQACLQFSIALFWILWAPTLVAD 289 (449)
Q Consensus 249 ----------------~--------------------~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 289 (449)
. ..++.+++.+ +++.+.+++++.... |+....|.|.++.+
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~-yygl~~w~P~~~~~ 474 (742)
T TIGR01299 396 HIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFG-YYGLSVWFPDMIKH 474 (742)
T ss_pred HHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 0 0122233321 223333333333333 44457799976321
Q ss_pred C-----------------------------------C-----------------c-------------------------
Q 013096 290 G-----------------------------------R-----------------E------------------------- 292 (449)
Q Consensus 290 ~-----------------------------------~-----------------~------------------------- 292 (449)
. . .
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 554 (742)
T TIGR01299 475 LQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDT 554 (742)
T ss_pred HHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhh
Confidence 0 0 0
Q ss_pred -----------------------------------c-----chHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHH
Q 013096 293 -----------------------------------V-----HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYA 332 (449)
Q Consensus 293 -----------------------------------~-----~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~ 332 (449)
. ..........++.++|.++.+++.| |+++++.+..+
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~D---r~GRr~~l~~~ 631 (742)
T TIGR01299 555 LFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMD---KIGRLRMLAGS 631 (742)
T ss_pred hccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCHHHHHHH
Confidence 0 0011122344677889999999999 89988888777
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhc
Q 013096 333 FVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNI 412 (449)
Q Consensus 333 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~ 412 (449)
.++.+++.++..+..+. ...++..++++++.+..++...++.+|.+|++.||+++|+......++.+.++.+++...+.
T Consensus 632 ~~lsai~~ll~~~~~s~-~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~ 710 (742)
T TIGR01299 632 MVLSCISCFFLSFGNSE-SAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI 710 (742)
T ss_pred HHHHHHHHHHHHHHccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 76666665544443322 22333445556666677888889999999999999999999988888766666654433233
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013096 413 ENAAMVAFAALGLFIAAGCMHVLKRWGKQ 441 (449)
Q Consensus 413 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 441 (449)
+....+.++++..++++++..++++++++
T Consensus 711 ~~~~pf~i~a~~lll~~ll~~~LPET~~~ 739 (742)
T TIGR01299 711 TKAAPILFASAALACGGLLALKLPDTRGQ 739 (742)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence 33334444444444444444455555443
No 17
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=2.5e-26 Score=230.59 Aligned_cols=357 Identities=15% Similarity=0.058 Sum_probs=228.4
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhCCChHH-----HHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH
Q 013096 60 LLLFSLASVMEGLWSVFGEYELVYYGVAKEQ-----MMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV 134 (449)
Q Consensus 60 ~~~~~l~~~~~~~~~~~~~~l~~~~g~s~~~-----ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l 134 (449)
+...++....+.+..|++|.+.+++|.++.+ ++.+.+...+...+++++.|+++||+|||++++.+.+...++++
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 99 (408)
T PRK09874 20 WLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMV 99 (408)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHH
Confidence 3444556666677888988888999998654 47888889999999999999999999999999998888877765
Q ss_pred -HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCC
Q 013096 135 -WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKG 213 (449)
Q Consensus 135 -~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g 213 (449)
+...+|++.+++.|++.|++.+. .+...+ .+.+. .++++.++..+.......++.+++|.+++.+.+.. +
T Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~ 170 (408)
T PRK09874 100 LMGLAQNIWQFLILRALLGLLGGF-VPNANA-LIATQ----VPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY---G 170 (408)
T ss_pred HHHHHhhHHHHHHHHHHHHHhhhh-HHhHHH-HHHHh----cCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---C
Confidence 66778999999999999998654 344333 23332 34445566677666666677778888888887755 8
Q ss_pred cchhHHHHHHHHHHHHHHHHhccccCCCC-Ccch-hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--
Q 013096 214 VVPSSTASVFLSILGIICVSRGWTENPKM-AFDD-YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-- 289 (449)
Q Consensus 214 ~~~~f~~~~~~~~~~~~~i~~~~~e~~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-- 289 (449)
||+.|.+.....++..+...+..||++++ ++++ .+.+...+.+++++.+.......+...........+.|.+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (408)
T PRK09874 171 LRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELA 250 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999876665555444444445554322 1111 1112233456677665422222222111122222234444432
Q ss_pred CCcc----chHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhh
Q 013096 290 GREV----HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVG 365 (449)
Q Consensus 290 ~~~~----~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g 365 (449)
++.. ..+.+.....++.+++....+++.| |+++++.+..+....++......... +.+.......+.+++.+
T Consensus 251 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~d---r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~ 326 (408)
T PRK09874 251 GNVSNIAFISGMIASVPGVAALLSAPRLGKLGD---RIGPEKILITALIFSVLLLIPMSFVQ-TPLQLGILRFLLGAADG 326 (408)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccchhHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhH
Confidence 1111 1344445556677788888999999 77877776655544443333322222 23333444456677888
Q ss_pred hhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHh-HHhhhcchhHHHHHHHHHHHHHH
Q 013096 366 LILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLR-GFYRNIENAAMVAFAALGLFIAA 429 (449)
Q Consensus 366 ~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~l~~~ 429 (449)
...|...+...+..|++.||+.++..+...+++...++..+ .+.+..++...+...++..+++.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~ 391 (408)
T PRK09874 327 ALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNA 391 (408)
T ss_pred hhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHH
Confidence 88888888888889999999999998887777765565554 44455666555554444444333
No 18
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=3e-26 Score=228.48 Aligned_cols=364 Identities=11% Similarity=-0.018 Sum_probs=227.2
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcch
Q 013096 63 FSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAH 141 (449)
Q Consensus 63 ~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~ 141 (449)
.++....+....|..|.+.+|+|.|+++++++.+...++..+++++.|+++||+||||++..+..+.+++.+ +..++|+
T Consensus 12 ~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~ 91 (382)
T PRK10091 12 TFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSY 91 (382)
T ss_pred HHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 334455566677888888899999999999999999999999999999999999999999999999988776 7889999
Q ss_pred hHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHH
Q 013096 142 PSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTAS 221 (449)
Q Consensus 142 ~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~ 221 (449)
+.+++.|+++|++.+...+...+ .+.|. .++++.++.++....+..++..++|.+++++.+.. +||+.|.+.
T Consensus 92 ~~l~~~r~l~G~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~---gwr~~f~~~ 163 (382)
T PRK10091 92 LMLAIGRLVSGFPHGAFFGVGAI-VLSKI----IKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF---SWRYTFLLI 163 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHH-HHHHh----CChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc---cHHHHHHHH
Confidence 99999999999999876655432 44443 23344556677666666777778888888887654 899999987
Q ss_pred HHHHHHHHHHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHH
Q 013096 222 VFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIF 299 (449)
Q Consensus 222 ~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~ 299 (449)
....++..+...+..||.+++++++ .++.+ +.++|++.+.......+.+...+.......|.+.+. + ++.+.+...
T Consensus 164 ~~~~~~~~~~~~~~lp~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~ 241 (382)
T PRK10091 164 AVFNIAVLASIYFWVPDIRDEAKGG-LREQF-HFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIM 241 (382)
T ss_pred HHHHHHHHHHHHHhCCCCCcccccC-HHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 6655444444444567654322211 12223 345666666543333332222222222223333221 3 445577777
Q ss_pred HHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhh-hHHHHHHhcc
Q 013096 300 PSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLIL-PSLARLRTMY 378 (449)
Q Consensus 300 ~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~-p~~~~~~~~~ 378 (449)
....++.+++..+.+++.| |+++++.+..+..+.++.........++.+..+...++.+.+.+... |.......+.
T Consensus 242 ~~~~~~~~ig~~~~g~l~~---r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 318 (382)
T PRK10091 242 MLVGLGMVLGNLLSGRLSG---RYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNA 318 (382)
T ss_pred HHHHHHHHHHhHHHheecc---ccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhC
Confidence 7888889999999999999 77777776665554444433222211122222223333333332223 3333344454
Q ss_pred CCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhh-cchhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013096 379 VPNELRGGMISLSLAPANAAILLFLLL-RGFYRN-IENAAMVAFAALGLFIAAGCMHVLKRWGKQ 441 (449)
Q Consensus 379 ~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 441 (449)
.|++.++++.+ +...+++...++.. |.+.+. .++...+...++..++.+.+.....++|+|
T Consensus 319 ~~~~~~~~~~~--~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (382)
T PRK10091 319 KGGELLGAAGG--QIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQ 381 (382)
T ss_pred CcchHHHHHHH--HHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 55566665533 44445554445544 444553 456565555544444444455555544443
No 19
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=7e-26 Score=225.74 Aligned_cols=372 Identities=12% Similarity=0.030 Sum_probs=232.9
Q ss_pred hhhHHHHHH---HHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHH
Q 013096 54 PFQRNFLLL---FSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHL 130 (449)
Q Consensus 54 ~~~~~~~~~---~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~ 130 (449)
+++|.++.+ .++......+..|+.|.+.+++|.|+.|+|++.+...++..+++++.|+++||+||||++..+.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 3 TYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 444544433 23444445567888888888999999999999999999999999999999999999999999999988
Q ss_pred HHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc
Q 013096 131 FVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 131 ~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~ 209 (449)
++++ +..++|++.+++.|+++|++.+...+..++++..+ .++++.++.++.......++..++|.+++.+.+..
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCS-----GTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 8776 77889999999999999999998777665544322 23344567777777777777888888888876532
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 013096 210 VKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD 289 (449)
Q Consensus 210 ~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 289 (449)
.++.++........+. .....+.+|+++++ + +..+++++++||+.+..... .+.....+.....+.|.+.++
T Consensus 158 ---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lp~~~~~ 229 (381)
T PRK03633 158 ---MSVLPWVTGLVLAAIL-PLLFTRILNQQAEN--H-DSTSIWPMLKLRQARLGVNG-CIISGIVLGSLYGLMPLYLNH 229 (381)
T ss_pred ---cchHHHHHHHHHHHHH-HHHHhcccCCCCCC--C-CCCCHHHHHHhcchHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 2333333322222111 12222223322111 1 11235567788776643221 112111122223457877654
Q ss_pred -C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhh
Q 013096 290 -G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLI 367 (449)
Q Consensus 290 -~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~ 367 (449)
+ ++...|.......++.+++....+++.| |+++++.+..+..+.+++..... .. . .......+.+++.+..
T Consensus 230 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d---r~~~~~~l~~~~~~~~~~~~~~~-~~-~--~~~~~~~l~g~~~~~~ 302 (381)
T PRK03633 230 QGMSDASIGFWMALLVSAGILGQWPIGRLAD---RFGRLLVLRVQVFVVILGSIAML-SQ-A--AMAPALFILGAAGFTL 302 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHH---HcCcHHHHHHHHHHHHHHHHHHh-hh-H--HHHHHHHHHHHHHHhH
Confidence 2 3345677777777788899999999999 78877776655444443332211 11 1 1122333445445556
Q ss_pred hhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013096 368 LPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAALGLFIAAGCMHVLKRWGKQPYQNW 446 (449)
Q Consensus 368 ~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 446 (449)
.|..++...|..|++++++..+......+++...++.. |.+.++.+....+.+.+... .......+|++|++++...
T Consensus 303 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~--l~~~~~~~~~~~~~~~~~~ 380 (381)
T PRK03633 303 YPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVS--FIYLLMLLRKAGHTPTPVA 380 (381)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHH--HHHHHHHHhccCCCCCccc
Confidence 78888888899998888887777766666665555544 44556555544333322222 2223455566555555444
Q ss_pred c
Q 013096 447 H 447 (449)
Q Consensus 447 ~ 447 (449)
|
T Consensus 381 ~ 381 (381)
T PRK03633 381 H 381 (381)
T ss_pred C
Confidence 4
No 20
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=4.7e-26 Score=227.75 Aligned_cols=344 Identities=16% Similarity=0.086 Sum_probs=216.2
Q ss_pred HHHHHHHhhhhhHHHHHH-HHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH----HHH
Q 013096 63 FSLASVMEGLWSVFGEYE-LVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV----WKS 137 (449)
Q Consensus 63 ~~l~~~~~~~~~~~~~~l-~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l----~~~ 137 (449)
.++.....++..|++|.. .+|+|.|+.++|++.+...++..+++++.|+++||+||||+++.+.+...++++ +..
T Consensus 24 ~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~ 103 (392)
T PRK12382 24 VFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAI 103 (392)
T ss_pred HHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhc
Confidence 344455556677877653 468999999999999999999999999999999999999999988777665432 111
Q ss_pred -----hcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 013096 138 -----ITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKK 212 (449)
Q Consensus 138 -----~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~ 212 (449)
.+|++.+++.|+++|++.+...++..++. .|. .++++.+++++..+.....+..++|.+++++.+..
T Consensus 104 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~-~~~----~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~--- 175 (392)
T PRK12382 104 LPVSAPFKFALLVVGRLILGFGESQLLTGALTWG-LGL----VGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF--- 175 (392)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh----CCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 35789999999999999987776654433 333 23344566676666666667778888888887654
Q ss_pred CcchhHHHHHHHHHHHHHHHHhccccCCCCCc-chhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccCCC
Q 013096 213 GVVPSSTASVFLSILGIICVSRGWTENPKMAF-DDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGR 291 (449)
Q Consensus 213 g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 291 (449)
||+..+.+.....++... ..+..||.+++++ ++..++.++.+++ +... ..+... .+..+..|.|.+.++..
T Consensus 176 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~l~~~-~~~~~~~~~~~~~~~~~ 247 (392)
T PRK12382 176 GFAALALTTMVLPLLAWA-FNGTVRKVPAHAGERPSLWSVVGLIWK-PGLG-----LALQGV-GFAVIGTFVSLYFASKG 247 (392)
T ss_pred ChHHHHHHHHHHHHHHHH-HHHhccCCCCCcccCchHHHHHHHHHH-hHHH-----HHHHHH-HHhHHHHHHHHHHHhcC
Confidence 888777665444333322 2233344332211 1111111222211 1111 111111 12222335555554422
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHH
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSL 371 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~ 371 (449)
..+.+.....+.++.+++....+++.| |++++|.+..+..+.++........+ +.+..+....+.+++.+...|..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~g~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~ 323 (392)
T PRK12382 248 WAMAGFTLTAFGGAFVLMRVLFGWMPD---RFGGVKVAIVSLLVETVGLLLLWLAP-TAWVALAGAALTGAGCSLIFPAL 323 (392)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHH---hcCCCeehHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHhHHHHH
Confidence 223455555666777889999999999 67777766655544444443333333 33333445556677777778888
Q ss_pred HHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHHHHHH
Q 013096 372 ARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAALGLF 426 (449)
Q Consensus 372 ~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l 426 (449)
.+...+..|+++||+++|+.+...+++...++.. |.+.+..++...+.+.++..+
T Consensus 324 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~ 379 (392)
T PRK12382 324 GVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAV 379 (392)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 8888889999999999999888777764444443 555566666555544443333
No 21
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.96 E-value=3e-26 Score=230.72 Aligned_cols=357 Identities=13% Similarity=0.098 Sum_probs=227.3
Q ss_pred hhhhHHHHHHHHHHHHHhhh----hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHH
Q 013096 53 VPFQRNFLLLFSLASVMEGL----WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFIL 128 (449)
Q Consensus 53 ~~~~~~~~~~~~l~~~~~~~----~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~ 128 (449)
||.+++.....++....+.+ .+...+.+.+|+|+|+++++++.++.+++..+++++.|+++||+||||++..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 3 KKLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred eeehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 34455555555555555443 34555677789999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Q 013096 129 HLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVG 207 (449)
Q Consensus 129 ~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~ 207 (449)
++++++ +++++|++++++.|+++|++.+...+...+ ++.|. +++++.++..+.......++.++++.+++++.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~----~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 157 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILL-YLTFW----FPAYFRARANALFMIAMPVTMALGLILSGYILA 157 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHH-HHHHH----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 998876 778899999999999999999987766543 33443 455556777777777777778888888887763
Q ss_pred cc---ccCCcchhHHHHHHHHHHHHHHHHhccccCCCCC----cchh----------------------h-----hhhhH
Q 013096 208 ID---VKKGVVPSSTASVFLSILGIICVSRGWTENPKMA----FDDY----------------------R-----TSFFT 253 (449)
Q Consensus 208 ~~---~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~----~~~~----------------------~-----~~~~~ 253 (449)
.. ..+|||+.|.+.++..++..++..+..||++++. +++. + +..++
T Consensus 158 ~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (412)
T TIGR02332 158 LDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLR 237 (412)
T ss_pred CCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHH
Confidence 20 0248999999866555444344444567765321 0000 0 01133
Q ss_pred hhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C---CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhH-
Q 013096 254 YIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDC- 328 (449)
Q Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~---~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~- 328 (449)
.++ ++.++...+...+.....+. +..|.|.++++ + +....+.......++..+|..+.+++.| |+++++.
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~d---r~~~r~~~ 312 (412)
T TIGR02332 238 EIF-TPAIMLYTLAYFCLTNTLSA-INIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSD---RLKERKHH 312 (412)
T ss_pred Hhc-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhc---ccCccHHH
Confidence 333 35555554444444333333 45689998875 2 2344566677777888999999999999 6665553
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHH-HhH
Q 013096 329 LLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLL-LRG 407 (449)
Q Consensus 329 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~-~g~ 407 (449)
........++.+.+.....++ ...+...++..++.....+.......|..|+++||+++|+.+...+++...++. .|.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~ 391 (412)
T TIGR02332 313 TALPYLFAAAGWLLASATDHN-LIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGI 391 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccc
Confidence 333333333333222222221 111212222222222223333444467789999999999998888776544443 345
Q ss_pred Hhhhcc-hhHHHHH
Q 013096 408 FYRNIE-NAAMVAF 420 (449)
Q Consensus 408 ~~~~~~-~~~~~~~ 420 (449)
..+..+ +...+.+
T Consensus 392 i~~~~g~~~~~~~~ 405 (412)
T TIGR02332 392 LKDATGSFNSGLWF 405 (412)
T ss_pred ccccCCCCchhHHH
Confidence 555543 5544433
No 22
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=3.2e-26 Score=230.93 Aligned_cols=368 Identities=13% Similarity=0.034 Sum_probs=241.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH---H
Q 013096 62 LFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK---S 137 (449)
Q Consensus 62 ~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~---~ 137 (449)
..++..+++++..+..|.+.++++.++.+.|++.+...++..+++++.|+++||+||||+++.+..+.+++.+ .. +
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHH
Confidence 3456667777778888777788888999999999999999999999999999999999999887776665443 22 1
Q ss_pred --hcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcc
Q 013096 138 --ITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVV 215 (449)
Q Consensus 138 --~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~ 215 (449)
.++++.+++.|+++|++.+...++..+ .+.|. .++++.++..+.......++.+++|.+++.+.+.. +|+
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~---~~~ 176 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLA-ATPAL----VGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG---GVA 176 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhh-hhhhc----cCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH---hhH
Confidence 467899999999999998876655444 23332 34445666777766667777888999999887754 788
Q ss_pred hhHHHHHHHHHHHHHHHHhccccCCCCC--cc---hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-
Q 013096 216 PSSTASVFLSILGIICVSRGWTENPKMA--FD---DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD- 289 (449)
Q Consensus 216 ~~f~~~~~~~~~~~~~i~~~~~e~~~~~--~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~- 289 (449)
+.|.+..+..+++.+.. ...||+++++ ++ +..+++++.+++||.++...+...+.. ... ....|.|.+.++
T Consensus 177 ~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~p~~~~~~ 253 (417)
T PRK10489 177 WNYGLAAAGTFITLLPL-LRLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLT-MAS-AVRVLYPALADEV 253 (417)
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHH-HHH-hHHHhhHHHHHhc
Confidence 88887665554444333 3455543321 11 112245677888887665443332221 112 223467777665
Q ss_pred -C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhh
Q 013096 290 -G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLI 367 (449)
Q Consensus 290 -~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~ 367 (449)
+ +....|++.+...++.++|..+.+++.| |.++++.+..+..+.++.+......+ +.+......++++++.+..
T Consensus 254 ~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~---~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~ 329 (417)
T PRK10489 254 WQMGAAQIGLLYAAVPLGAALGALTSGWLAH---SARPGLLMLLSTLGSFLAVGLFGLMP-MWILAVLCLALFGYLSAIS 329 (417)
T ss_pred cCCChhHhHHHHHHHHHHHHHHHHHHHHhhh---ccCcchHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHH
Confidence 2 3445788888888888999999999988 44455555555444444444333332 3333344555566666766
Q ss_pred hhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchh-HHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013096 368 LPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIENA-AMVAFAALGLFIAAGCMHVLKRWGKQPYQ 444 (449)
Q Consensus 368 ~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 444 (449)
.+...++.++..|++.||+++|+.+...+.+...++.. |.+.+..+.. .....+++.++++.......++.|++..+
T Consensus 330 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (417)
T PRK10489 330 SLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQT 408 (417)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 67777888999999999999999887777665444444 5555655643 33344445555454444444554443333
No 23
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.96 E-value=3e-26 Score=236.11 Aligned_cols=324 Identities=10% Similarity=0.002 Sum_probs=228.0
Q ss_pred HHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhH
Q 013096 65 LASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPS 143 (449)
Q Consensus 65 l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~ 143 (449)
+......+.+...|.+.+|+|.++++++++.+.+.++..+++++.|+++||+|||++++.+.+++.++++ |+.++|++.
T Consensus 17 ~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~ 96 (495)
T PRK14995 17 PVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASW 96 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 3334444556777899999999999999999999999999999999999999999999999999998876 889999999
Q ss_pred HHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHH
Q 013096 144 VWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVF 223 (449)
Q Consensus 144 l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~ 223 (449)
++++|+++|+|.+...+...+.+..+. .++++.++.++.......++..++|.+++++.+.. +||+.|++...
T Consensus 97 li~~r~l~G~g~~~~~~~~~~~l~~~~----~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~---gwr~~f~i~~~ 169 (495)
T PRK14995 97 LIATRALLAIGAAMIVPATLAGIRATF----TEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF---YWGSVFLINVP 169 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC---ChHHHHHHHHH
Confidence 999999999999887665433222211 24456777888887778888899999999998865 89999998776
Q ss_pred HHHHHHHHHHhccccCCCCCc--chhh--------------------h------------------------------hh
Q 013096 224 LSILGIICVSRGWTENPKMAF--DDYR--------------------T------------------------------SF 251 (449)
Q Consensus 224 ~~~~~~~~i~~~~~e~~~~~~--~~~~--------------------~------------------------------~~ 251 (449)
+.++..++..+..||++++++ .+.. + ++
T Consensus 170 ~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p 249 (495)
T PRK14995 170 IVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRP 249 (495)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 665555545445565432211 0100 0 00
Q ss_pred h--HhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCch
Q 013096 252 F--TYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE 326 (449)
Q Consensus 252 ~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~ 326 (449)
. .+++|||.+....+...+.....+.+ ..+.|.++++ + ++.+.|.......++..+++.+.+++.| |++++
T Consensus 250 ~~~~~lf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~---r~g~~ 325 (495)
T PRK14995 250 MIDMRLFTHRIILSGVVMAMTAMITLVGF-ELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVS---RLGLR 325 (495)
T ss_pred CcCHHHhCCcccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCch
Confidence 0 14566666655444333333333332 3356766553 3 4567888888888889999999999999 77777
Q ss_pred hHHHHHHHHHHHHHHHHhc-c-cchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHH
Q 013096 327 DCLLYAFVVLGFVFSIIAY-D-YQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 399 (449)
Q Consensus 327 ~~l~~~~~~~~~~l~~~~~-~-~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~ 399 (449)
+.+..+..+.+++...... . ..+.+......++.+++.|+..+.......+..|+|++|++.++.++..+++.
T Consensus 326 ~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~ 400 (495)
T PRK14995 326 LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGA 400 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHH
Confidence 7666555444443332221 1 12223334455667888888888888888889999999999988877666653
No 24
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.96 E-value=7.7e-26 Score=232.84 Aligned_cols=326 Identities=14% Similarity=0.118 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHHhhhh----hHHHHHHHHHhCCChHH----HHH--HHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHH
Q 013096 57 RNFLLLFSLASVMEGLW----SVFGEYELVYYGVAKEQ----MML--LLCAGFSAALFVGSFLGMISDLIGQKKVCLIFF 126 (449)
Q Consensus 57 ~~~~~~~~l~~~~~~~~----~~~~~~l~~~~g~s~~~----ig~--l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~ 126 (449)
++......++.+.|+++ +...+.+.++++.+..+ ++. .+++++++..+++++.|+++||+|||+++..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34455556777777654 34445566677543321 222 257778899999999999999999999999999
Q ss_pred HHHHHHHH-HHHhcchhH--------HHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHH
Q 013096 127 ILHLFVGV-WKSITAHPS--------VWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIG 197 (449)
Q Consensus 127 ~~~~~~~l-~~~~~s~~~--------l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~ 197 (449)
++++++++ +++++|+++ +++.|+++|++.|..++...+ ++.|..+++ +.++..+....+..++.++
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~-~~~e~~p~~----~Rg~~~~~~~~~~~~G~~l 169 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASI-FVAEYSPDR----KRGFMGSWLDFGSIAGFVL 169 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHH-HHHHhCCCC----CCcHHHHHHHHHHHHHHHH
Confidence 99999886 889999875 899999999999998887654 566664322 2333444444444444444
Q ss_pred HHHHHHHHhc----c-cccCCcchhHHHHHHHHHHHHHHHHhccccCCCCC-c-----c--h-----hhhhhhHhhhc-C
Q 013096 198 GQVLANWLVG----I-DVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA-F-----D--D-----YRTSFFTYIFG-D 258 (449)
Q Consensus 198 a~~lg~~l~~----~-~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~-~-----~--~-----~~~~~~~~l~~-~ 258 (449)
++.+...+.. . ...+|||++|+++++..+++. ++.+..||++... . + + ..+.+++++++ +
T Consensus 170 g~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (490)
T PRK10642 170 GAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGL-YLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKH 248 (490)
T ss_pred HHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHH-HHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHh
Confidence 4443332211 0 013699999999776555443 3445677765311 0 0 0 01123555554 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHH
Q 013096 259 KRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVV 335 (449)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~ 335 (449)
++.+.......+.....++....|.|.++++ + +....+.......++..++..+.+++.| |+++++.+..+..+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~grr~~~~~~~~~ 325 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSD---RFGRRPFVILGSVA 325 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHH
Confidence 3333322222222222333445688988753 2 2223344455556777888999999999 78887766554432
Q ss_pred HH-HHHHHHh-cccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhh
Q 013096 336 LG-FVFSIIA-YDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLS 391 (449)
Q Consensus 336 ~~-~~l~~~~-~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~ 391 (449)
.. .++.... ...++....+...++.+++.+...+....+..|.+|++.||+++|+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~ 383 (490)
T PRK10642 326 LFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAA 383 (490)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHH
Confidence 22 1111111 11122223333444445555555566667778899999999998864
No 25
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.96 E-value=6.2e-26 Score=229.32 Aligned_cols=350 Identities=13% Similarity=0.031 Sum_probs=223.4
Q ss_pred hhhhHHHHHHHHHHHHHhhh----hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHH
Q 013096 53 VPFQRNFLLLFSLASVMEGL----WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFIL 128 (449)
Q Consensus 53 ~~~~~~~~~~~~l~~~~~~~----~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~ 128 (449)
++.|++.+....+..+.+++ ..+..|.+.+++|+|+.+.+.+.+...++..+++++.|+++||+|||+++..+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 13 TRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 35555555454455544443 34556677789999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Q 013096 129 HLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVG 207 (449)
Q Consensus 129 ~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~ 207 (449)
.+++++ +.++++++.+++.|+++|++.+...+.... ++.|. .++++.++..+....+..++.++++.+.+.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~-~~~~~----~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACAST-YAVES----WPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHH-HHHHh----CCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 988776 778899999999999999999877766544 44443 344456667777666777778888888887766
Q ss_pred ccccCCcchhHHHHHHHHHHHHHHHHhccccCCCCC-----cch-h-------hhhhhHhhhcChhHHHHHHHHHH--HH
Q 013096 208 IDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA-----FDD-Y-------RTSFFTYIFGDKRIWLLVLAQAC--LQ 272 (449)
Q Consensus 208 ~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~-----~~~-~-------~~~~~~~l~~~~~~~~~~~~~~~--~~ 272 (449)
.. +||++|.+.....++.. ......||+++.+ +++ . .+..+++++++|+++........ ..
T Consensus 168 ~~---~w~~~f~i~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (426)
T PRK12307 168 AY---GWRAAFFVGLLPVLLVI-YIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSI 243 (426)
T ss_pred cC---CHHHHHHHHHHHHHHHH-HHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 54 89999987654433332 2222345543210 000 0 01246678888776543221111 11
Q ss_pred HHHHHHHHHhhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchh
Q 013096 273 FSIALFWILWAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEI 350 (449)
Q Consensus 273 ~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~ 350 (449)
......+..|.|.+.++ + ++...+.......++.++|..+.+++.| |+++++.+..+..+.++.+.......++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~d---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (426)
T PRK12307 244 FGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCAD---RIGLKKTFSIGLLMSFLFIFPLFRIPQDN 320 (426)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 11111234467777654 2 3344566667777888999999999999 77777766655544433332222211111
Q ss_pred HHHHHHHHHHHH--HhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchh
Q 013096 351 GILVALFCLFHA--CVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIENA 415 (449)
Q Consensus 351 ~~~~~~~~l~~~--~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~ 415 (449)
.. ....++++. ......+.......|.+|++.||+++|+.+...+++...++.. |.+.+..+..
T Consensus 321 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~ 387 (426)
T PRK12307 321 YL-LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLG 387 (426)
T ss_pred HH-HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHH
Confidence 11 112222222 1112234455667899999999999998877777665445444 4444556543
No 26
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=1.2e-25 Score=227.98 Aligned_cols=354 Identities=10% Similarity=-0.003 Sum_probs=221.4
Q ss_pred hhhhHHHHHHHHHHHHHhhh----hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHH
Q 013096 53 VPFQRNFLLLFSLASVMEGL----WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFIL 128 (449)
Q Consensus 53 ~~~~~~~~~~~~l~~~~~~~----~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~ 128 (449)
+..++..+...++..+.+++ .++..|.+.+++|+|+++++.+.+...++..+++++.|+++||+|||+++.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 18 RYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 34444444444455544442 35667888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Q 013096 129 HLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVG 207 (449)
Q Consensus 129 ~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~ 207 (449)
.+++++ +..++|++.+++.|+++|++.|...+...+ ++.|. +++++.++.++.......++.+++|.+++++.+
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~-~~~~~----~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAK-LLTAW----YSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHH-HHHHh----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888776 778899999999999999999876665543 33333 455566777887777777888888888888877
Q ss_pred ccccCCcchhHHHHHHHHHHHHHHHHhccccCCCC----C----c-------chh--hhhhhH-----hhhcChhHHHHH
Q 013096 208 IDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM----A----F-------DDY--RTSFFT-----YIFGDKRIWLLV 265 (449)
Q Consensus 208 ~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~----~----~-------~~~--~~~~~~-----~l~~~~~~~~~~ 265 (449)
.+ |||+.|.+.++..++..+......+|++.+ + + ++. .+.+++ .+++|++++...
T Consensus 173 ~~---gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (434)
T PRK11663 173 HY---GWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLS 249 (434)
T ss_pred cc---cHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHH
Confidence 54 899999876554333322222233443211 0 0 000 001122 256677777665
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCC--CchhHH-HH---HHHHH
Q 013096 266 LAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSF--RTEDCL-LY---AFVVL 336 (449)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~--~~~~~l-~~---~~~~~ 336 (449)
+...+.+.. +..+..|.|.++.+ + +..+.+.....+.++.++|..+.+++.| |+ ++|+.. .. +....
T Consensus 250 ~~~~~~~~~-~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~d---r~~~~~r~~~~~~~~~~~~~~ 325 (434)
T PRK11663 250 FSYVLVYVV-RAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSD---KLFNGNRGPMNLIFAAGILLS 325 (434)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHH---HhccCCccHHHHHHHHHHHHH
Confidence 544333332 33345688888753 2 3345566667777888999999999999 44 222221 11 11111
Q ss_pred HHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHH-HHhHHhhhcchh
Q 013096 337 GFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFL-LLRGFYRNIENA 415 (449)
Q Consensus 337 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~ 415 (449)
.+.+.. ....+.......++..+++.............|..|++.||++.|+.+...+++...++ +.|.+.+..+.+
T Consensus 326 ~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~ 403 (434)
T PRK11663 326 VGSLWL--MPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWT 403 (434)
T ss_pred HHHHHH--cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccH
Confidence 111111 11112112222222222221111222334567888999999999999988888754444 345555666665
Q ss_pred HHHHH
Q 013096 416 AMVAF 420 (449)
Q Consensus 416 ~~~~~ 420 (449)
..+..
T Consensus 404 ~~f~~ 408 (434)
T PRK11663 404 GFFVV 408 (434)
T ss_pred HHHHH
Confidence 54433
No 27
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=5.8e-26 Score=231.45 Aligned_cols=382 Identities=9% Similarity=0.020 Sum_probs=220.2
Q ss_pred cchhhhHHHHHHHHHHHHHhhhh----hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHH
Q 013096 51 SFVPFQRNFLLLFSLASVMEGLW----SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFF 126 (449)
Q Consensus 51 ~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~ 126 (449)
.+++.++..+...++.....++. ++..|.+.++ |+|+++.++..+...++..+++++.|+++||+|||++++.+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~ 100 (452)
T PRK11273 22 TYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGL 100 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHH
Confidence 34555555544444544444432 3445555566 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HHHh----cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHH-HHHHH
Q 013096 127 ILHLFVGV-WKSI----TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAAL-IGGQV 200 (449)
Q Consensus 127 ~~~~~~~l-~~~~----~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~-i~a~~ 200 (449)
++++++++ +.+. ++++.+++.|+++|++.+...+.... .+.| .+++++.++..+....+..++. +.+|+
T Consensus 101 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~-~~~~----~~~~~~r~~~~~~~~~~~~~g~~~~~~l 175 (452)
T PRK11273 101 ILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGR-TMVH----WWSQKERGGIVSVWNCAHNVGGGLPPLL 175 (452)
T ss_pred HHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHH-HHHH----hCChHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 88887765 4443 47888999999999998876655433 2222 2455556667776555555443 34454
Q ss_pred HHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccCCCC----Cc-c-----------h-h----hhhh-hHhhhcC
Q 013096 201 LANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM----AF-D-----------D-Y----RTSF-FTYIFGD 258 (449)
Q Consensus 201 lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~----~~-~-----------~-~----~~~~-~~~l~~~ 258 (449)
++..+... .+||+.|++...+.++..++.....||++++ ++ + + . .++. .+.+++|
T Consensus 176 ~~~~~~~~---~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (452)
T PRK11273 176 FLLGMAWF---NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPN 252 (452)
T ss_pred HHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcC
Confidence 43333222 2889999876554444333333334443321 00 0 0 0 0111 1346788
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhccCC---CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCC--CchhHHH-HH
Q 013096 259 KRIWLLVLAQACLQFSIALFWILWAPTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSF--RTEDCLL-YA 332 (449)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~--~~~~~l~-~~ 332 (449)
+.++...+...+.+...+. ...|.|.++++. +..+.+.......++..++..+.+++.| |+ ++++... ..
T Consensus 253 ~~~~~~~l~~~~~~~~~~~-~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~d---r~~~~r~~~~~~~~ 328 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYG-ILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSD---KVFRGNRGATGVFF 328 (452)
T ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHccCCcchHHHHH
Confidence 8888766655555544333 355889888642 2344566666667778889999999999 44 2222221 11
Q ss_pred HHHHHHHHHHHhcc-cchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHH-HHHH-HHhHHh
Q 013096 333 FVVLGFVFSIIAYD-YQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI-LLFL-LLRGFY 409 (449)
Q Consensus 333 ~~~~~~~l~~~~~~-~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~-~~~~-~~g~~~ 409 (449)
..+..+.+...... ..+.+.........+.......+.......|.+|++.||+++|+.+...+++. ..++ +.|...
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~ 408 (452)
T PRK11273 329 MTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 408 (452)
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 11222222211111 11222222222222322211222334456789999999999999887766653 3333 335555
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013096 410 RNIENAAMVAFAALGLFIAAGCMHVLKRWGKQPYQN 445 (449)
Q Consensus 410 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 445 (449)
+..++...+..+....+++++.....++.+|+.+||
T Consensus 409 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (452)
T PRK11273 409 DFFGWDGGFMVMIGGSILAVILLIVVMIGEKRHHEE 444 (452)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHhccccchHHH
Confidence 666665555433333333434444455554444444
No 28
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.96 E-value=2.2e-25 Score=228.14 Aligned_cols=357 Identities=15% Similarity=0.191 Sum_probs=251.9
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH----
Q 013096 59 FLLLFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV---- 134 (449)
Q Consensus 59 ~~~~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l---- 134 (449)
++....++.+++|++....+-+..+..-|+.+++++..+..++.+++++++|.++||++|||+++.+.++..+.++
T Consensus 15 lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~ 94 (524)
T PF05977_consen 15 LWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAV 94 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 4556678899999987766555556677899999999999999999999999999999999999998777654331
Q ss_pred HHH--hcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 013096 135 WKS--ITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKK 212 (449)
Q Consensus 135 ~~~--~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~ 212 (449)
+.. ..+.+.+++.-++.|++.+...|+.++ .++|. .+++++.++.+..+....++-++||.+||.+....
T Consensus 95 l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A-~ip~l----V~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~--- 166 (524)
T PF05977_consen 95 LAFFGLLSPWLLLILTFLLGIGSAFFNPAWQA-IIPEL----VPKEDLPAANALNSISFNIARIIGPALGGILVAFF--- 166 (524)
T ss_pred HHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh----ccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH---
Confidence 122 247899999999999999998888766 45555 35567888888877777777888999999988765
Q ss_pred CcchhHHHHHHHHHHHHHHHHhccccCCCC---Ccc---hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 013096 213 GVVPSSTASVFLSILGIICVSRGWTENPKM---AFD---DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTL 286 (449)
Q Consensus 213 g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~---~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 286 (449)
|-.+.|.+.++..++....+. .++++.++ +++ +..+++++.+.++|.+....+..++++.....+ ....|.+
T Consensus 167 G~~~~f~inalsfl~~i~~l~-~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~-~aLlPl~ 244 (524)
T PF05977_consen 167 GAAAAFLINALSFLISILALL-RWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAV-WALLPLF 244 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHH-HHhhhHH
Confidence 666788876655444433333 34332221 111 123467888888887765544333333222222 2236777
Q ss_pred ccC---CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Q 013096 287 VAD---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHAC 363 (449)
Q Consensus 287 ~~~---~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 363 (449)
.++ +++..+|++.++.++|.++|+.+.+++.+ +++.++.+..+.++.++++....+.+ +.+.....+++.+++
T Consensus 245 a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~---~~~~~~lv~~~~~~~a~~~~~lal~~-~~~~~~~~l~l~G~~ 320 (524)
T PF05977_consen 245 ARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRR---RLSSRRLVLLASLLFALALLLLALSP-SFWLALIALFLAGAA 320 (524)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc---ccCcchhhHHHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHH
Confidence 653 34567899999999999999999999887 67777766666666666655555544 344445566667777
Q ss_pred hhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHHHHHHHHH
Q 013096 364 VGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAALGLFIAA 429 (449)
Q Consensus 364 ~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~~ 429 (449)
........++..++..|++.||+++|++++..+.+...+.+. |.+.+..+.+..+..+++.+++..
T Consensus 321 ~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 321 WIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 777778888999999999999999999998777765444444 555566776665555554444433
No 29
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.96 E-value=4.3e-26 Score=225.43 Aligned_cols=337 Identities=12% Similarity=0.005 Sum_probs=219.8
Q ss_pred hhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHH
Q 013096 71 GLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANI 149 (449)
Q Consensus 71 ~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~ 149 (449)
...+++.|.+.+++|+|+++++++.++..++..+++++.|+++||+|||++++.+.++..++++ +++++|++.+++.|+
T Consensus 20 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (377)
T TIGR00890 20 YTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYG 99 (377)
T ss_pred hhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788888899999999999999999999999999999999999999999999999888776 788999999999999
Q ss_pred HHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHH
Q 013096 150 CLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGI 229 (449)
Q Consensus 150 l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~ 229 (449)
++|++.+...+.... .+.|. ++ ++.++..+....+..++.++++.+.+.+.+.. +||+.|.+..++.++..
T Consensus 100 ~~g~~~~~~~~~~~~-~~~~~----~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~f~~~~~~~~~~~ 170 (377)
T TIGR00890 100 LASAGVGIAYGIALN-TAVKW----FP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE---GVPAAFIYMGIIFLLVI 170 (377)
T ss_pred HHhHHHHHHHHhHHH-HHHHH----cC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHH
Confidence 999999876655432 22222 12 23455666666666666555555555555543 89999988665544443
Q ss_pred HHHHhccccCCCCC---c-c-hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHHH
Q 013096 230 ICVSRGWTENPKMA---F-D-DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPSL 302 (449)
Q Consensus 230 ~~i~~~~~e~~~~~---~-~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~ 302 (449)
+...+..+|+++++ + + +..+...++.++||+.+.......+........ ..+.|.+.++ + ++.+.+......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (377)
T TIGR00890 171 VLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLL-IGLYKPYGQSLGLSDGFLVLAVSIS 249 (377)
T ss_pred HHHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHH-HHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 33333333332211 1 1 111224567888888776554333332222222 2223334333 2 233456667777
Q ss_pred HHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCC
Q 013096 303 LGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQ-EIGILVALFCLFHACVGLILPSLARLRTMYVPN 381 (449)
Q Consensus 303 ~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~ 381 (449)
.++.+++..+.+++.| |+++++.+..+..+.+++.......++ +....+...++.+++.|...+...++.+|.+|+
T Consensus 250 ~~~~~~~~~~~g~l~d---r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~ 326 (377)
T TIGR00890 250 SIFNGGGRPFLGALSD---KIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGP 326 (377)
T ss_pred HHHHHHHHHHHHHHHH---HHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhh
Confidence 7888899999999999 777777666555544444433333221 111222333445566666666667788899999
Q ss_pred cchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHH
Q 013096 382 ELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAF 420 (449)
Q Consensus 382 ~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~ 420 (449)
++||++.|+.+...+++...++.. |...+..+....+..
T Consensus 327 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~ 366 (377)
T TIGR00890 327 ANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIV 366 (377)
T ss_pred hhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHH
Confidence 999999999988877765445444 444555665544433
No 30
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.96 E-value=1.7e-26 Score=236.29 Aligned_cols=328 Identities=12% Similarity=0.038 Sum_probs=203.6
Q ss_pred hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH------HHHhcchhHHHH
Q 013096 73 WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV------WKSITAHPSVWV 146 (449)
Q Consensus 73 ~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l------~~~~~s~~~l~~ 146 (449)
.++..|.+.+|+|+|+.|.|++.+.+++++.+++++.|+++||+|||+++..+.++.++.+. +..++|++.+++
T Consensus 48 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 127 (467)
T PRK09556 48 FKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIA 127 (467)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 45667888899999999999999999999999999999999999999999888777665442 233689999999
Q ss_pred HHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHH
Q 013096 147 ANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSI 226 (449)
Q Consensus 147 ~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~ 226 (449)
.|+++|++.+...+...+ ++.|. +++++.+++++....+..++.++++.+..++.....+.+||..|.+...+.+
T Consensus 128 ~r~l~G~~~~~~~~~~~~-~i~~~----~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~ 202 (467)
T PRK09556 128 LWALSGFFQSTGGPCSYS-TITRW----TPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIAL 202 (467)
T ss_pred HHHHHHHHHhccchHHHH-HHHHH----cCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHH
Confidence 999999999877776544 44444 3444455556655555566666777776665543112258888876444333
Q ss_pred HHHHHHHhccccCCCC------C-----c---ch----hh----hhh-hHhhhcChhHHHHHHHHHHHHHHHHHHHHHhh
Q 013096 227 LGIICVSRGWTENPKM------A-----F---DD----YR----TSF-FTYIFGDKRIWLLVLAQACLQFSIALFWILWA 283 (449)
Q Consensus 227 ~~~~~i~~~~~e~~~~------~-----~---~~----~~----~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (449)
+..+..++..++++++ + . ++ .+ ++. .+++++||+++...+...+.+...+. ...|.
T Consensus 203 ~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~ 281 (467)
T PRK09556 203 IIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIG-IDNWS 281 (467)
T ss_pred HHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 2222222222222110 0 0 00 00 011 23367888888777666555544333 46789
Q ss_pred hhhccCC---CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHH--HHHhcccchhHHHHHHHH
Q 013096 284 PTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVF--SIIAYDYQEIGILVALFC 358 (449)
Q Consensus 284 p~~~~~~---~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~ 358 (449)
|.++++. +..+.+.......++..+|..+.+++.| |+++++.......+..+.. ...... ++........+
T Consensus 282 p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsD---r~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 357 (467)
T PRK09556 282 PVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSD---LANGRRALVACIALALIIFTLGVYQHA-TSEYMYLASLF 357 (467)
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCchHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHH
Confidence 9887642 3344566666677788999999999999 6776665443322222211 111121 22222223333
Q ss_pred HHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHH-H-HHHHHHHhHHhh
Q 013096 359 LFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA-A-ILLFLLLRGFYR 410 (449)
Q Consensus 359 l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~-~-~~~~~~~g~~~~ 410 (449)
+.+++.............|..|++.||++.|+.+...++ + .....+.|.+.+
T Consensus 358 ~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 358 ALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 333322111122234556999999999999999887775 4 333444465556
No 31
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=5.6e-26 Score=227.31 Aligned_cols=353 Identities=12% Similarity=0.076 Sum_probs=223.5
Q ss_pred hhhHHHHHHHHHHHHHhh----hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHH
Q 013096 54 PFQRNFLLLFSLASVMEG----LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILH 129 (449)
Q Consensus 54 ~~~~~~~~~~~l~~~~~~----~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~ 129 (449)
+.|++.+....++...+. +.++..+.+.+++|.|+.+++++.+...++..+++++.|+++||+|||++++.+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 334444444444444443 4566777777899999999999999999999999999999999999999999998888
Q ss_pred HHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Q 013096 130 LFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGI 208 (449)
Q Consensus 130 ~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~ 208 (449)
+++++ +.+++|++.+++.|+++|++.+...+...+ ++.|. .++++.++..+....+..++.++++.+++.+.+.
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~-~i~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~ 162 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAA-YVIES----WPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV 162 (405)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHH-HHHHh----CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88776 778899999999999999999887776554 33443 3444566677776767777778888888887765
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhccccCCCCCc----chhhhhhhHhhhcC-------------------hh----H
Q 013096 209 DVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF----DDYRTSFFTYIFGD-------------------KR----I 261 (449)
Q Consensus 209 ~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~----~~~~~~~~~~l~~~-------------------~~----~ 261 (449)
. +.+||+.|.+.+...++..+ .....||+++.++ ++..++..++..++ ++ +
T Consensus 163 ~-~~~w~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
T TIGR00891 163 W-GDGWRALFFISILPIIFALW-LRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTF 240 (405)
T ss_pred c-CccHHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHH
Confidence 4 23499999886665554433 3344566543110 00000001111110 01 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHH
Q 013096 262 WLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF 338 (449)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~ 338 (449)
........+.+. .......+.|.+..+ + +..+.+.+.....++.++|..+.+++.| |+++++.+..+....++
T Consensus 241 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d---r~g~~~~~~~~~~~~~~ 316 (405)
T TIGR00891 241 VYLVVLVLFANL-YSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGD---WLGRRKAYVCSLLAGQL 316 (405)
T ss_pred HHHHHHHHHHHH-HHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCchhhhHHHHHHHHH
Confidence 111111111111 112223456766543 2 3455677777778889999999999999 77777766655443322
Q ss_pred HHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcc-hhH
Q 013096 339 VFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIE-NAA 416 (449)
Q Consensus 339 ~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~-~~~ 416 (449)
.........++.+......++.+++.+...+....+.+|.+|+++||+++|+.+...+++...++.. |.+.+..+ ++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~ 396 (405)
T TIGR00891 317 LIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGT 396 (405)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 2221111122222223332334444444566677788999999999999999888777765445444 55556665 444
Q ss_pred H
Q 013096 417 M 417 (449)
Q Consensus 417 ~ 417 (449)
.
T Consensus 397 ~ 397 (405)
T TIGR00891 397 A 397 (405)
T ss_pred h
Confidence 3
No 32
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=1.8e-25 Score=223.77 Aligned_cols=345 Identities=11% Similarity=0.054 Sum_probs=223.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-H
Q 013096 58 NFLLLFSLASVMEGLWSVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-W 135 (449)
Q Consensus 58 ~~~~~~~l~~~~~~~~~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~ 135 (449)
.++...++...+.+...|+.+... +++|+|+.++|++.+...+.+.+++++.|+++||+||||+++.+.+...++.+ .
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 334445555666666777776555 57999999999999999999999999999999999999999998888877765 6
Q ss_pred HHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcc
Q 013096 136 KSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVV 215 (449)
Q Consensus 136 ~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~ 215 (449)
.+++|++.+++.|.+.|.+.+...++.++|+. |. .++++.++.++.......++..++|.+++++.+ . +|+
T Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~----~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~---g~~ 161 (395)
T PRK10054 91 PLVNNVTLVVLFFALINCAYSVFSTVLKAWFA-DN----LSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q---SIN 161 (395)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h---ccC
Confidence 77889999999999988877766666655542 22 344456677777766777788888999988764 3 788
Q ss_pred hhHHHHHHHHHHHHHHHHhccccCCCCCc-chhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhcc---C-C
Q 013096 216 PSSTASVFLSILGIICVSRGWTENPKMAF-DDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---D-G 290 (449)
Q Consensus 216 ~~f~~~~~~~~~~~~~i~~~~~e~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~-~ 290 (449)
.+|.+.....++..+.+....||++++++ ++......+++++||+++...+...+.......+ ..+.+.+.. + +
T Consensus 162 ~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 240 (395)
T PRK10054 162 LPFWLAAICSAFPLVFIQIWVQRSEKAIATETGSVWSPSVLLQDKALLWFTCSGFLASFVSGAF-ASCISQYVMVVADSD 240 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhhhhhccCceehHHHHHHHHHHHHHHHh-hhhHHHHHHHhcccc
Confidence 99998766555554434333444432211 1111122467888998877665544433332222 123343332 1 1
Q ss_pred -CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhh
Q 013096 291 -REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILP 369 (449)
Q Consensus 291 -~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p 369 (449)
++...+.++..............+++.| |.++++.+..+..+.++.+.......++.+.......+++++.+...|
T Consensus 241 ~~~~~~g~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p 317 (395)
T PRK10054 241 FAEKVVAVVLPVNAAMVVSLQYSVGRRLN---AANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAP 317 (395)
T ss_pred hHHHHHHHHHHhhhhheeeehhHHHHHHc---cCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHh
Confidence 1223455555555555555567788888 666666666555444444433333222333334445566777777788
Q ss_pred HHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhH
Q 013096 370 SLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAA 416 (449)
Q Consensus 370 ~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~ 416 (449)
...++..+..|++.||+.++..+ ...++...++.. |.+.+..+...
T Consensus 318 ~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~ 364 (395)
T PRK10054 318 GEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWS 364 (395)
T ss_pred hHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhh
Confidence 88888999999999999887654 333444445444 44456565433
No 33
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=2.9e-25 Score=220.84 Aligned_cols=329 Identities=12% Similarity=0.052 Sum_probs=226.6
Q ss_pred HHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhH
Q 013096 65 LASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPS 143 (449)
Q Consensus 65 l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~ 143 (449)
+...+..+..|..|.+.+++|.|+++++++.+...++..+++++.|+++||+||||++..+.++..++.+ +...++++.
T Consensus 16 ~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (385)
T TIGR00710 16 LGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIET 95 (385)
T ss_pred HHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 3344455667778888889999999999999999999999999999999999999999999888888776 777899999
Q ss_pred HHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHH
Q 013096 144 VWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVF 223 (449)
Q Consensus 144 l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~ 223 (449)
+.+.|+++|++.+...+..++ ++.|. .++++.++.++.......++..++|.+++++.+.. +||..|.+...
T Consensus 96 ~~~~~~l~g~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---~~~~~~~~~~~ 167 (385)
T TIGR00710 96 LLVLRFVQAFGASAGSVISQA-LVRDI----YPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL---SWHAIFAFLSL 167 (385)
T ss_pred HHHHHHHHHcchhHHHHHHHH-HHHHh----cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CHHHHHHHHHH
Confidence 999999999999887776654 33443 34455677777777677777788888888887754 89999987665
Q ss_pred HHHHHHHHHHhccccCCCCCcc---hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHH
Q 013096 224 LSILGIICVSRGWTENPKMAFD---DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGL 297 (449)
Q Consensus 224 ~~~~~~~~i~~~~~e~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~ 297 (449)
..++..+......||+++++++ +...+.++++++||+++...+...+.....+.+ ..+.|.+.++ + ++...+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~g~ 246 (385)
T TIGR00710 168 AGILLSALIFFILPETLPYEARIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAF-FSGAPFVYIDIMGVSPSVFGL 246 (385)
T ss_pred HHHHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH-HHcChHHHHHHcCCCHHHHHH
Confidence 5444444444445665543221 122345677889998887665544444333333 3356766542 2 3455777
Q ss_pred HHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhc---cc-chhHHHHHHHHHHHHHhhhhhhHHHH
Q 013096 298 IFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAY---DY-QEIGILVALFCLFHACVGLILPSLAR 373 (449)
Q Consensus 298 i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~---~~-~~~~~~~~~~~l~~~~~g~~~p~~~~ 373 (449)
+.....++.+++..+.+++.| |+++++.+..+..+..+....... .. +.....+...++.+++.+...+....
T Consensus 247 ~~~~~~~~~~~~~~~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 323 (385)
T TIGR00710 247 LFALNIIAMIFGGFLNGRFIK---KWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMA 323 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777778888999999999999 777777665544333332222111 11 12222333444556777777777777
Q ss_pred HHhccCCCcchhHHHHhhHHHHHH-HHHHHHHHh
Q 013096 374 LRTMYVPNELRGGMISLSLAPANA-AILLFLLLR 406 (449)
Q Consensus 374 ~~~~~~p~~~rg~~~~~~~~~~~~-~~~~~~~~g 406 (449)
...|..| +.||++.++.+...+. +.+.++..+
T Consensus 324 ~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 324 YALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778776 5689999987765544 334444445
No 34
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=1.5e-25 Score=222.13 Aligned_cols=351 Identities=17% Similarity=0.092 Sum_probs=219.8
Q ss_pred HHHHHHHHHHhhhhhHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHH-HHHHHHHHHH-HH
Q 013096 60 LLLFSLASVMEGLWSVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLI-FFILHLFVGV-WK 136 (449)
Q Consensus 60 ~~~~~l~~~~~~~~~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~-~~~~~~~~~l-~~ 136 (449)
+..+++...+.++..|+.+... +++|.|+.++|++.+...+...+.+|+.|.++||+||||.++. +.+...++++ +.
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 3445666666777888886644 5899999999999999988899999999999999999988665 4444455544 77
Q ss_pred HhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcch
Q 013096 137 SITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVP 216 (449)
Q Consensus 137 ~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~ 216 (449)
.++|++.+++.|+++|.+.+...|...+ +..|..+++ ++......+.......++.+++|.+++++.+.. +||+
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~---~~~~ 156 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFA-LAREHADRT--GREAVMFSSVMRAQISLAWVIGPPLAFWLALGF---GFTV 156 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHH-HHHHHhhhc--chhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc---ccHH
Confidence 8899999999999998877766665544 334432211 111111234444455667778888888887754 8999
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-Ccc
Q 013096 217 SSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REV 293 (449)
Q Consensus 217 ~f~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~ 293 (449)
+|++.+...++..+...+..||.+++++++..+.+.++.+++|+.+.......+.... +.....+.|.+.++ + ++.
T Consensus 157 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 235 (375)
T TIGR00899 157 MFLTAALAFVLCGVLVWLFLPSYPRGAPGALTRLEVRGLLASRDTRLLFVACTLMWGC-NILYIINMPLLIIHELGLPDK 235 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCcccccCcchhhhhhcCcchHHHHHHHHHHHHH-HHHHHhhhHHHHHHHcCCCHH
Confidence 9998776655554444444666543322211222345567777766543333222222 12223355666543 2 344
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHH
Q 013096 294 HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLAR 373 (449)
Q Consensus 294 ~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~ 373 (449)
+.|............+..+.+++.| |+++++.+..+.....+........+ +.+.......+.+++.|...|..+.
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~g~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~~ 311 (375)
T TIGR00899 236 LAGLMMGTAAGLEIPFMLLAGYLIK---RFGKRRLMLLAALAGVAFYTGLAADN-SLWALLMLQLLNAIFIGILAGIGML 311 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHH---HhcchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666655555566777888999999 77777766555443333322222222 3333333444556777777788888
Q ss_pred HHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHH
Q 013096 374 LRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAA 422 (449)
Q Consensus 374 ~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 422 (449)
+.+|..|+ +++++.++.+...+++...++.. |...+..+....+.+.+
T Consensus 312 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~ 360 (375)
T TIGR00899 312 YFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAI 360 (375)
T ss_pred HHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 88888875 46799999887777765555444 44455556554444433
No 35
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=5.5e-25 Score=220.71 Aligned_cols=335 Identities=14% Similarity=0.121 Sum_probs=220.0
Q ss_pred HHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHH
Q 013096 66 ASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSV 144 (449)
Q Consensus 66 ~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l 144 (449)
+.+...+..|..+++.+++|.|++++++..++..++..+++++.|+++||+|||+++..+..+..++++ +..++|++.+
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQL 97 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 334445567777778889999999999999999999999999999999999999999999888887765 7788999999
Q ss_pred HHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHH
Q 013096 145 WVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFL 224 (449)
Q Consensus 145 ~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~ 224 (449)
++.|+++|++.+...+...+ ++.|. +++++..+.++.......++..++|.+++++.+.+ +||+.|.+....
T Consensus 98 ~~~~~l~G~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~---g~~~~~~~~~~~ 169 (401)
T PRK11043 98 LVLRFVQAVGVCSAAVIWQA-LVIDR----YPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF---GWQAIFATLFAI 169 (401)
T ss_pred HHHHHHHHhhhHHHHHHHHH-HHHHh----cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---ChHHHHHHHHHH
Confidence 99999999998765554433 22332 34444555666555555566778888898887755 899999876655
Q ss_pred HHHHHHHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHHH
Q 013096 225 SILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPSL 302 (449)
Q Consensus 225 ~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~ 302 (449)
.++..+...+ .+|++++++++.++.++++++++|+.+...+...+.....+.+ ..+.|.+.++ + ++.+.|+.+...
T Consensus 170 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~g~s~~~~g~~~~~~ 247 (401)
T PRK11043 170 TLLLILPTLR-LKPSKKARKQSQDALTFKQLLKSKTYLGNVLIFAACSAAFFAW-LTGSPFILEQMGYSPADIGLSYVPQ 247 (401)
T ss_pred HHHHHHHHHH-cCCCCCccccchHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-HHHhHHHHHHcCCCHHHHHHHHHHH
Confidence 5544433333 3443332222223345788889988765444333333332333 3456766653 2 344567766666
Q ss_pred HHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHH---HHHHHhc-ccchhHHHHHHHHHHHHHhhhhhhHHHHHHhcc
Q 013096 303 LGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF---VFSIIAY-DYQEIGILVALFCLFHACVGLILPSLARLRTMY 378 (449)
Q Consensus 303 ~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~---~l~~~~~-~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~ 378 (449)
..+.++|+...+++.| |+++++.........++ .+..... ..++....+..+++.+++.+...|..++...+.
T Consensus 248 ~~~~~~g~~~~~~l~~---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (401)
T PRK11043 248 TIAFLVGGYGCRAALQ---KWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRP 324 (401)
T ss_pred HHHHHHHHHHHHHHHH---HcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 7788899999999998 67766654333222221 1222112 122222334445566777788888887777676
Q ss_pred CCCcchhHHHHhhHHHHHHHH-HHHHHHhHHhhhcch
Q 013096 379 VPNELRGGMISLSLAPANAAI-LLFLLLRGFYRNIEN 414 (449)
Q Consensus 379 ~p~~~rg~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 414 (449)
.| ++||++.|+.+.....+. .+..+.|.+.++...
T Consensus 325 ~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 360 (401)
T PRK11043 325 FP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLL 360 (401)
T ss_pred Cc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChh
Confidence 66 579999999887655443 333444555554333
No 36
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=2.4e-26 Score=225.36 Aligned_cols=329 Identities=21% Similarity=0.233 Sum_probs=226.1
Q ss_pred HHHHHHHHHhhhhhHHHH-HHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh
Q 013096 61 LLFSLASVMEGLWSVFGE-YELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI 138 (449)
Q Consensus 61 ~~~~l~~~~~~~~~~~~~-~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~ 138 (449)
...++..+.+.+..|..+ .+.+++|.|+.+++++.+...++..+++++.|+++||+||||+++.+.++.+++++ +.++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence 345566677777788887 66679999999999999999999999999999999999999999999999988854 5556
Q ss_pred cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhH
Q 013096 139 TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSS 218 (449)
Q Consensus 139 ~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f 218 (449)
+|.+.+++.|+++|++.+...+...+ ++.|. .++++.++.++.......++.+++|.+++++.+.. +||+.|
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~-~i~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~---~~~~~~ 154 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNA-LIADW----FPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF---GWRWAF 154 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHC----CCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC---HHCCHH
T ss_pred hhHHHHhhhccccccccccccccccc-ccccc----chhhhhhhccccccchhhhhhhcccchhhhhhhcc---cccccc
Confidence 88889999999999999888777655 33332 44456777888888888888899999999988654 899999
Q ss_pred HHHHHHHHHHHHHHHhccccCCCC-C---cchh---hh----hhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 013096 219 TASVFLSILGIICVSRGWTENPKM-A---FDDY---RT----SFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLV 287 (449)
Q Consensus 219 ~~~~~~~~~~~~~i~~~~~e~~~~-~---~~~~---~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 287 (449)
++.+...++..++.....+|++++ + +++. .+ +.++.++++|.++...... +.....+.....|.|.+.
T Consensus 155 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 233 (352)
T PF07690_consen 155 LISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAF-FLFFFVFSGFSFFLPLYL 233 (352)
T ss_dssp HHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHH-HHHHHHHHHHHHHHHHHC
T ss_pred ccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhh-hHHHHHHHHhhcccchhh
Confidence 987777666544322233333222 1 1111 11 1256677777665222222 222222233455788874
Q ss_pred cC--C-C-ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc--chhHHHHHHHHHHH
Q 013096 288 AD--G-R-EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY--QEIGILVALFCLFH 361 (449)
Q Consensus 288 ~~--~-~-~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~l~~ 361 (449)
.+ + + ..+.+..+....+...++..+.+++.| |+++++..........+......... ++.........+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 310 (352)
T PF07690_consen 234 QEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSD---RFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIG 310 (352)
T ss_dssp CHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHH
T ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 43 2 3 255666677777788888999999998 67665554443333322222222211 12233344555677
Q ss_pred HHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHH
Q 013096 362 ACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILL 401 (449)
Q Consensus 362 ~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~ 401 (449)
++.+...|...++.++..|+|+||++.|+.+...+++...
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~i 350 (352)
T PF07690_consen 311 FGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGII 350 (352)
T ss_dssp HHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999999999999999999988777765443
No 37
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=3.8e-25 Score=224.12 Aligned_cols=339 Identities=12% Similarity=0.045 Sum_probs=219.0
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-H---HHh
Q 013096 63 FSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-W---KSI 138 (449)
Q Consensus 63 ~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~---~~~ 138 (449)
+++-.+.+....++.|.+.+++|.|+.+.|+..+..+++..+++++.|+++||+||||++..+..+++++++ + ..+
T Consensus 35 ~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a 114 (438)
T PRK10133 35 FFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEI 114 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344445556677888888889999999999999999999999999999999999999999999999998775 3 457
Q ss_pred cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhc-c---------
Q 013096 139 TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVG-I--------- 208 (449)
Q Consensus 139 ~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~-~--------- 208 (449)
+|++.++++|+++|+|.+...++.++. +.|..+ +++..+..+.......++..+++.++..+.. .
T Consensus 115 ~~~~~ll~~r~l~G~g~g~~~~~~~~~-v~~~~~----~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~ 189 (438)
T PRK10133 115 MNYTLFLVGLFIIAAGLGCLETAANPF-VTVLGP----ESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVL 189 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHH-HHHhCC----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhh
Confidence 899999999999999999887776653 334321 1122223444455555666667766654330 0
Q ss_pred -------ccc------CCcchhHHH-HHHHHHHHHHHHHhccccCCCCCcch----hhhhhhHhhhcChhHHHHHHHHHH
Q 013096 209 -------DVK------KGVVPSSTA-SVFLSILGIICVSRGWTENPKMAFDD----YRTSFFTYIFGDKRIWLLVLAQAC 270 (449)
Q Consensus 209 -------~~~------~g~~~~f~~-~~~~~~~~~~~i~~~~~e~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~ 270 (449)
..+ .+||++|+. ..+..++..+...+..||.+++++++ ...+.++++++||+++...+...+
T Consensus 190 ~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~ 269 (438)
T PRK10133 190 DKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFC 269 (438)
T ss_pred hccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccchhhhHHHHHhCchHHHHHHHHHH
Confidence 000 256777764 33333333333334445533221111 112346788899987765444433
Q ss_pred HHHHHHHHHHHhhhhhc-cC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcc
Q 013096 271 LQFSIALFWILWAPTLV-AD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYD 346 (449)
Q Consensus 271 ~~~~~~~~~~~~~p~~~-~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 346 (449)
.....+. ...|.|.++ ++ + ++.+.+..+..+.+++++|+.+.+++.| |++++|.+..+..+..+.+.+..+.
T Consensus 270 ~~~~~~~-~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~---r~g~~~~l~~~~~~~~~~~~~~~~~ 345 (438)
T PRK10133 270 YVGAQTA-CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLIS---RFAPHKVLAAYALIAMALCLISAFA 345 (438)
T ss_pred HHHHHHH-HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 3333222 234666553 32 2 4556788888889999999999999999 7888887766554443333333332
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhcc
Q 013096 347 YQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIE 413 (449)
Q Consensus 347 ~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 413 (449)
... ..+..+.+.+++.+..+|...+...+..|++ .+++.++..+....+.+.+++.|...+..+
T Consensus 346 ~~~--~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~~~~g~~~~~~i~G~l~~~~g 409 (438)
T PRK10133 346 GGH--VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVMTIIGGGIVTPVMGFVSDAAG 409 (438)
T ss_pred CCh--HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhHHhccchHHHHHHHHHHHhcc
Confidence 221 2244566778999999999999998887754 556666554322222344455565556554
No 38
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=1.1e-25 Score=228.30 Aligned_cols=350 Identities=11% Similarity=0.034 Sum_probs=205.2
Q ss_pred hhHHHHHHHHHHHHHhhh----hhHHHHHHHHHhCCChHHHHHHH-H-----HHHHhHHHHHHHHHhhhhhhCchHHHHH
Q 013096 55 FQRNFLLLFSLASVMEGL----WSVFGEYELVYYGVAKEQMMLLL-C-----AGFSAALFVGSFLGMISDLIGQKKVCLI 124 (449)
Q Consensus 55 ~~~~~~~~~~l~~~~~~~----~~~~~~~l~~~~g~s~~~ig~l~-~-----~~~~~~~l~~~~~G~laDr~GRr~~ll~ 124 (449)
.|++......++.+.|.+ .++..|.+.+|++.++.+.+.+. + .+++...+++++.|+++||+||||+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 344455555566666654 45677888889999887765332 2 2233345678899999999999999999
Q ss_pred HHHHHHHHHH-HHHhcchh--------HHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHH
Q 013096 125 FFILHLFVGV-WKSITAHP--------SVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAAL 195 (449)
Q Consensus 125 ~~~~~~~~~l-~~~~~s~~--------~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~ 195 (449)
+..++.++++ +++++|++ .+++.|+++|++.+...+.... ++.|.. |+++.++..+.......++.
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~~~e~~----p~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSV-YLAEIA----TPGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHH-HHHhhC----CcccchHHHHHHHHHHHHHH
Confidence 9999988776 88888877 4689999999999987776544 455543 33444555555444444444
Q ss_pred HHHHHHHHHHhccc-----ccCCcchhHHHHHHHHHHHHHHHHhccccCCCC--Ccch-hhhhhhHhhhcChhHHHHHHH
Q 013096 196 IGGQVLANWLVGID-----VKKGVVPSSTASVFLSILGIICVSRGWTENPKM--AFDD-YRTSFFTYIFGDKRIWLLVLA 267 (449)
Q Consensus 196 i~a~~lg~~l~~~~-----~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~--~~~~-~~~~~~~~l~~~~~~~~~~~~ 267 (449)
.+++.++..+.... ..+|||++|++......+. .......||+++. ++++ ..++.++.+.++++.+.....
T Consensus 167 ~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (434)
T PRK15075 167 VFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI-FLIRRSLEETEEFLARKHRPSMREIFRSLAANWRIVLAGML 245 (434)
T ss_pred HHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHHhcCCCHHHHHhhhccccccHHHHHHHhHHHHHHHHH
Confidence 45555555432100 0359999999765443222 2233334454221 1011 111224445556555544333
Q ss_pred HHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHH-HHHH-
Q 013096 268 QACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF-VFSI- 342 (449)
Q Consensus 268 ~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~-~l~~- 342 (449)
..+.....+..+..|.|.++++ + +..+.++......++.+++..+.+++.| |+++|+....+..+..+ .+..
T Consensus 246 ~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~D---r~g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 246 MVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSD---RIGRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHHHHHHHHHHHHHHHHHH
Confidence 3333333344556789988764 2 2334555555666778899999999999 78877766544322221 1111
Q ss_pred -HhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHH--HHHHHHHHhHHhhhcc
Q 013096 343 -IAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA--AILLFLLLRGFYRNIE 413 (449)
Q Consensus 343 -~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~--~~~~~~~~g~~~~~~~ 413 (449)
.....++.........+.+++.|...+....+..|..|++.||++.++.+...+. +.....+.|...+..+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 323 SWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 1111122222222233344556666676777889999999999998885443332 2223333344445544
No 39
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=3.8e-25 Score=224.43 Aligned_cols=346 Identities=11% Similarity=0.032 Sum_probs=203.7
Q ss_pred hhHHHHHHHHHHHHHhhhhh----HHHHHHH-HHh--CCChHHHHHH-----HHHHHHhHHHHHHHHHhhhhhhCchHHH
Q 013096 55 FQRNFLLLFSLASVMEGLWS----VFGEYEL-VYY--GVAKEQMMLL-----LCAGFSAALFVGSFLGMISDLIGQKKVC 122 (449)
Q Consensus 55 ~~~~~~~~~~l~~~~~~~~~----~~~~~l~-~~~--g~s~~~ig~l-----~~~~~~~~~l~~~~~G~laDr~GRr~~l 122 (449)
.+++.....+++.+.|+++. .+.+... +++ +.++.+ +.+ +.++++...+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 34445555666777777643 2333222 345 677663 443 2456677888899999999999999999
Q ss_pred HHHHHHHHHHHH-HHHhcchh--------HHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHH
Q 013096 123 LIFFILHLFVGV-WKSITAHP--------SVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESA 193 (449)
Q Consensus 123 l~~~~~~~~~~l-~~~~~s~~--------~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~ 193 (449)
+.+.++++++++ +++++|++ .+++.|+++|++.|..++...+ ++.|..+++ +.++..+....+..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~~~e~~p~~----~rg~~~~~~~~g~~~ 172 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAAL-LAVESAPKN----KKAFYSSGVQVGYGV 172 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHH-HHHHhCCCC----CCcHHHHHHHHHHHH
Confidence 999999999876 88899987 5889999999999998877643 566664333 233444444445555
Q ss_pred HHHHHHHHHHHHhccc-----ccCCcchhHHHHHHHHHHHHHHHHhccccCCCCC-cc-h--h--hh-hhhHhhhcChhH
Q 013096 194 ALIGGQVLANWLVGID-----VKKGVVPSSTASVFLSILGIICVSRGWTENPKMA-FD-D--Y--RT-SFFTYIFGDKRI 261 (449)
Q Consensus 194 ~~i~a~~lg~~l~~~~-----~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~-~~-~--~--~~-~~~~~l~~~~~~ 261 (449)
+.++++.+..++.+.. ..+|||.+|.+..++.++. +.+....||+++.+ ++ + . ++ +..+.++++|+.
T Consensus 173 G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 251 (438)
T PRK09952 173 GLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGA 251 (438)
T ss_pred HHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHH
Confidence 5555555544443210 0359999999877665443 23444556764321 11 0 0 01 113346677776
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCc---cchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHH
Q 013096 262 WLLVLAQACLQFSIALFWILWAPTLVADGRE---VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF 338 (449)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~---~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~ 338 (449)
+.......+.....++....|.|.+.++..+ .....+.........++..+.+++.| |++++|.+..+..+..+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~D---r~grr~~~~~~~~~~~~ 328 (438)
T PRK09952 252 FLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLAD---RFGRRRVYITGALIGTL 328 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCchHHHHHHHHHHHH
Confidence 6554322222222222335578877654222 11222222334456678889999999 78877766655433332
Q ss_pred HHHHH--hc-ccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHH-HHHHHHHH-HhHHhh
Q 013096 339 VFSII--AY-DYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPAN-AAILLFLL-LRGFYR 410 (449)
Q Consensus 339 ~l~~~--~~-~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~-~~~~~~~~-~g~~~~ 410 (449)
+.... .. ..+.....+...++.+++.+...+..+++..|.+|++.|+++.++.....+ ++...++. .+.+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~ 405 (438)
T PRK09952 329 SAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVT 405 (438)
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 11 111222223334444666777778888899999999999998888544333 33333333 344444
No 40
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=2.5e-25 Score=221.08 Aligned_cols=312 Identities=15% Similarity=0.123 Sum_probs=213.0
Q ss_pred hhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHH
Q 013096 70 EGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVAN 148 (449)
Q Consensus 70 ~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R 148 (449)
..+..|..|.+.+++|+|+++++.+.+...++..+++++.|+++||+|||+++..+.++.+++++ +...++++.+++.|
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 86 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMR 86 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 34567888888899999999999999999999999999999999999999999999988888776 77789999999999
Q ss_pred HHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHH
Q 013096 149 ICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILG 228 (449)
Q Consensus 149 ~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~ 228 (449)
+++|++.+...+..++ ++.|. .++++.++.++.......++.+++|.+++++.+.. +||+.|.+.....++.
T Consensus 87 ~l~g~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~ 158 (377)
T PRK11102 87 FLHGLAAAAASVVINA-LMRDM----FPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF---SWHAIFWVLALAAILA 158 (377)
T ss_pred HHHHHHHHHHHHHHHH-HHHHh----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ChHHHHHHHHHHHHHH
Confidence 9999999877666554 33332 34555677777777777777888899888887754 8999998766655554
Q ss_pred HHHHHhccccCCCCCcc-h----hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHH
Q 013096 229 IICVSRGWTENPKMAFD-D----YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFP 300 (449)
Q Consensus 229 ~~~i~~~~~e~~~~~~~-~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~ 300 (449)
.+......||+++++++ + ...++++++++||+.+...+...+.....+.+ ..+.|.+..+ + ++.+.|..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~~~g~~~~ 237 (377)
T PRK11102 159 AALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSF-LTAGPFVYIELNGVSPQNFGYYFA 237 (377)
T ss_pred HHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH-HHcCHHHHHHHhCCCHHHHHHHHH
Confidence 44444445665433211 1 11234667888988776655444444333333 3345655443 2 4456788888
Q ss_pred HHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHH---HHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhc
Q 013096 301 SLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVV---LGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTM 377 (449)
Q Consensus 301 ~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~ 377 (449)
...++.+++..+.+++.| |+++++.+..+..+ .++.+......+...+.......++..+.+...+.......|
T Consensus 238 ~~~~~~~~~~~~~g~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (377)
T PRK11102 238 LNIVFLFVMTIINSRFVR---RVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILD 314 (377)
T ss_pred HHHHHHHHHHHHHHHHHH---HhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhc
Confidence 888888999999999999 78888766654432 222222222211122222222223333444455555566677
Q ss_pred cCCCcchhHHHHhhHHH
Q 013096 378 YVPNELRGGMISLSLAP 394 (449)
Q Consensus 378 ~~p~~~rg~~~~~~~~~ 394 (449)
..| +.+|++.+..+..
T Consensus 315 ~~~-~~~g~~~~~~~~~ 330 (377)
T PRK11102 315 EFP-HMAGTASSLAGTL 330 (377)
T ss_pred ccc-ccchHHHHHHHHH
Confidence 766 7899998886554
No 41
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=4e-25 Score=221.33 Aligned_cols=354 Identities=12% Similarity=0.028 Sum_probs=216.8
Q ss_pred hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHH
Q 013096 72 LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANIC 150 (449)
Q Consensus 72 ~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l 150 (449)
..++..|++.+++|+|+++++.+.+...++..+++++.|+++||+||||++..+.++..++++ +.+++|++.+++.|++
T Consensus 25 ~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l 104 (394)
T PRK03699 25 VTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFV 104 (394)
T ss_pred HHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHH
Confidence 356677888899999999999999999999999999999999999999999999888888776 7788999999999999
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII 230 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~ 230 (449)
+|++.+...+...+ ++.|. +++++.++..+.......++..++|.+.+++.... .+||++|.+...+.++..+
T Consensus 105 ~G~~~g~~~~~~~~-~i~~~----~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--~gw~~~f~~~~~~~~~~~~ 177 (394)
T PRK03699 105 LGVVSGITMSIGTF-LITHV----YEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS--IEWYWVYACIGLVYVAIFI 177 (394)
T ss_pred HHHhhHhhccchhH-Hhhhh----cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHH
Confidence 99999876665443 33333 23333444555444444455566777777665432 4899999875554443333
Q ss_pred HHH-hccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHH
Q 013096 231 CVS-RGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGAR 306 (449)
Q Consensus 231 ~i~-~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~ 306 (449)
+.. +..||.+++++++ .++..+. ..+++++...+...+.....+ .+..|.|.+.++ + +..+.+...+.+.++.
T Consensus 178 ~~~~~~~p~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~ 254 (394)
T PRK03699 178 LTLFSEFPALGKHAPKA-DKPVAKE-KWGIGVLFLAIAALLYILAQL-TFISWVPEYAQKKFGMSLEDAGNLVSNFWMAY 254 (394)
T ss_pred HHHhcCCccccccCccc-cCccccc-cCChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCChHHhhHHHHHHHHHH
Confidence 222 2223211111111 1111111 123455444433333332222 335689988854 2 3445677777777888
Q ss_pred HHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhH
Q 013096 307 MLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGG 386 (449)
Q Consensus 307 ~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~ 386 (449)
.+|..+.+++.| |+++++.+.....+..+.+......+ +........++.+++.+..+|...+...+..|++ +++
T Consensus 255 ~ig~~~~g~l~d---r~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~ 329 (394)
T PRK03699 255 MVGMWIFSFIVR---FFDLQRILTVLAGLALVLMYLFVNTD-DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPK 329 (394)
T ss_pred HHHHHHHHHHHH---HhchhhHHHHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHH
Confidence 999999999999 78877766654444333333332322 2222333344556666667777777777776644 567
Q ss_pred HHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 013096 387 MISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAALGLFIAAGCMHVLKRWGK 440 (449)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 440 (449)
..+......+++...++.. |.+.+..+....+...++..+++.+...+..|..|
T Consensus 330 ~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (394)
T PRK03699 330 LVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGFVSK 384 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 7777666666665445444 44555556544433333333333233334444333
No 42
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=9.6e-25 Score=218.46 Aligned_cols=328 Identities=14% Similarity=0.084 Sum_probs=217.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhH
Q 013096 65 LASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPS 143 (449)
Q Consensus 65 l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~ 143 (449)
+..+.+.+..|..|++.+++|.|+.+++++.+...++..+++++.|+++||+||||+++.+..+..++.+ +..++|++.
T Consensus 19 ~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (394)
T PRK11652 19 VGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTV 98 (394)
T ss_pred HHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 4445555667778888899999999999999999999999999999999999999999999888877665 677899999
Q ss_pred HHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHH
Q 013096 144 VWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVF 223 (449)
Q Consensus 144 l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~ 223 (449)
+++.|+++|++.+...+...+ ++.|. +++++.++..+....+..++..++|.+++++.+.. +||+.|.+...
T Consensus 99 l~~~~~~~g~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~---g~~~~f~~~~~ 170 (394)
T PRK11652 99 LIAASAIQGLGTGVGGVMART-LPRDL----YEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF---GWRACYLFLLL 170 (394)
T ss_pred HHHHHHHHHhhhhHHHHHHHH-HHHHh----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---ChHHHHHHHHH
Confidence 999999999998865544332 22222 34455666777766677777788899898887654 89999988655
Q ss_pred HHHHHHHHHHhccccCCCCCc-chhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHH
Q 013096 224 LSILGIICVSRGWTENPKMAF-DDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIF 299 (449)
Q Consensus 224 ~~~~~~~~i~~~~~e~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~ 299 (449)
..++..+......||++++++ ++..++.++++++||+.+...............+ ..+.|.+.++ + ++...|+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 249 (394)
T PRK11652 171 LGAGVTFSMARWMPETRPADARRTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVF-EACSGVLMGAVLGLSSMTVSILF 249 (394)
T ss_pred HHHHHHHHHHHhCCccCccccchhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH-HHhChHHHHHHcCCCHHHHHHHH
Confidence 544433333344577544322 2223456788899988765443322222222222 2234545443 2 344567777
Q ss_pred HHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHH-HHHHHHhcc-cchhHHHHHHHHHHHHHhhhhhhHHHHHHhc
Q 013096 300 PSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG-FVFSIIAYD-YQEIGILVALFCLFHACVGLILPSLARLRTM 377 (449)
Q Consensus 300 ~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~-~~l~~~~~~-~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~ 377 (449)
.....+..+|+.+.+++.| |.++.........+.+ +.+...... ..+.+......++.+++.++..|..++...+
T Consensus 250 ~~~~~~~~~g~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 326 (394)
T PRK11652 250 ILPIPAAFFGAWFAGRPNK---RFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAME 326 (394)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777788889999999988 4442221111111112 222222211 1122333445566777888889999998888
Q ss_pred cCCCcchhHHHHhhHHHHHHHHHHHHHH
Q 013096 378 YVPNELRGGMISLSLAPANAAILLFLLL 405 (449)
Q Consensus 378 ~~p~~~rg~~~~~~~~~~~~~~~~~~~~ 405 (449)
..| +++|++.++.+...+++...+...
T Consensus 327 ~~~-~~~g~~~~~~~~~~~lg~~~~~~~ 353 (394)
T PRK11652 327 PFP-YLAGTAGALLGGLQNIGSGLAALL 353 (394)
T ss_pred hcc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 887 568999888877777665444433
No 43
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=3.3e-25 Score=220.06 Aligned_cols=338 Identities=14% Similarity=0.082 Sum_probs=222.9
Q ss_pred hhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHH
Q 013096 71 GLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANI 149 (449)
Q Consensus 71 ~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~ 149 (449)
...++..|.+.+++|.|+.+++++.+...++..+++++.|+++||+|||+++..+.++..++.. +.+++|++.+++.|+
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRV 90 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 3445566777789999999999999999999999999999999999999999999988887765 778899999999999
Q ss_pred HHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHH
Q 013096 150 CLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGI 229 (449)
Q Consensus 150 l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~ 229 (449)
++|++.+...+...+ ++.|. .++++.++.++.......++.++++.+++++.+.. +||+.|.+.....++..
T Consensus 91 l~g~~~~~~~~~~~~-~~~~~----~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 91 LLGAAEAPFFPGIIL-IVASW----FPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF---SWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHhhhhHHHH-HHHHh----CCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC---CchHHHHHHHHHHHHHH
Confidence 999999887766554 34443 35556677788777777788888999888877755 89999987665544443
Q ss_pred HHHHhccccCCCCC---c---ch-----------------hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 013096 230 ICVSRGWTENPKMA---F---DD-----------------YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTL 286 (449)
Q Consensus 230 ~~i~~~~~e~~~~~---~---~~-----------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 286 (449)
+......||+++++ . ++ ..+...++.+++|+++...+...+...... ....|.|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 241 (399)
T TIGR00893 163 VLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLG-FFLTWFPTY 241 (399)
T ss_pred HHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHH-HHHHHHHHH
Confidence 33333344433210 0 00 001225577888888776655444443333 334467777
Q ss_pred ccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchh--HHHH-HH-HHHH--HHHHHHhcc-cchhHHHHHH
Q 013096 287 VAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED--CLLY-AF-VVLG--FVFSIIAYD-YQEIGILVAL 356 (449)
Q Consensus 287 ~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~--~l~~-~~-~~~~--~~l~~~~~~-~~~~~~~~~~ 356 (449)
.++ + ++.+.+.+.....++.+++..+.+++.| |+++++ .... .. .... ..+...... .+.....+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (399)
T TIGR00893 242 LVQERGLSILEAGFMASLPGIVGFIGMILGGRLSD---LLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALAL 318 (399)
T ss_pred HHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHH---HHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 654 2 3445677777777788899999999998 555553 1111 11 1111 111111111 1122222222
Q ss_pred HHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcc-hhHHHHHH
Q 013096 357 FCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIE-NAAMVAFA 421 (449)
Q Consensus 357 ~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~ 421 (449)
.++..++.+ ..|...++.+|..|+++||+++|+.+...+++...++.. |.+.+..+ ....+.+.
T Consensus 319 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~ 384 (399)
T TIGR00893 319 VALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVV 384 (399)
T ss_pred HHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHH
Confidence 223333344 678888999999999999999999988877765445444 44555555 44444333
No 44
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=4.2e-24 Score=214.49 Aligned_cols=349 Identities=14% Similarity=0.099 Sum_probs=217.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH--
Q 013096 60 LLLFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK-- 136 (449)
Q Consensus 60 ~~~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~-- 136 (449)
+...++...++++..++.+++.+|+|.|++|++++.+.+.++..+++++.|+++||+||||++..+.++++++++ +.
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~ 98 (402)
T TIGR00897 19 YIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVF 98 (402)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 344456666777777777777789999999999999999999999999999999999999999999988877654 32
Q ss_pred -H-hcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHH-HHHHHHHHHHhcccccCC
Q 013096 137 -S-ITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAAL-IGGQVLANWLVGIDVKKG 213 (449)
Q Consensus 137 -~-~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~-i~a~~lg~~l~~~~~~~g 213 (449)
. .+|++.+++.|+++|++.+...+...++.. + ..++++.+++.+.......++. +.+|.+++++.+.. |
T Consensus 99 ~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~-~----~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~---g 170 (402)
T TIGR00897 99 GLGHANYPLILLFYGIRGLGYPLFAYSFLVWVV-Y----NTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF---G 170 (402)
T ss_pred hccCccHHHHHHHHHHHHcchHHHHhHHHHHHH-H----hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---c
Confidence 2 357889999999999998776555443322 2 2355567778887776666664 57888888887654 6
Q ss_pred cchhHHHHHHHHHHHHHHHHhccccCCCC---Ccc---hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 013096 214 VVPSSTASVFLSILGIICVSRGWTENPKM---AFD---DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLV 287 (449)
Q Consensus 214 ~~~~f~~~~~~~~~~~~~i~~~~~e~~~~---~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 287 (449)
|+..++.......+..++.....+|.+++ +++ ++.++.++.+++||+++...+...+.....+.+ ..|.|.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~ 249 (402)
T TIGR00897 171 EMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGF-AVFLPMFV 249 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 55444433222222212122222322111 111 111234677899999887665544443333333 45788876
Q ss_pred cC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHH-HHHHHHHHHHHHHh----cccchhHHHHHHHHHH
Q 013096 288 AD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLL-YAFVVLGFVFSIIA----YDYQEIGILVALFCLF 360 (449)
Q Consensus 288 ~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~-~~~~~~~~~l~~~~----~~~~~~~~~~~~~~l~ 360 (449)
++ + +..+.+.+.....++..+|+...+++.| |+++++... .+....++...... ...++.+......++.
T Consensus 250 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d---r~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (402)
T TIGR00897 250 AELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGD---KLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIAL 326 (402)
T ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH---hhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHH
Confidence 54 2 3344566666677888999999999999 677666543 22222222111111 1112222333344455
Q ss_pred HHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHH
Q 013096 361 HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAA 422 (449)
Q Consensus 361 ~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 422 (449)
+++.+...|. .....+.. +++||+++|+.+...+++...++.. |.+.+..+....+.+.+
T Consensus 327 G~~~~~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a 387 (402)
T TIGR00897 327 GIFLAGYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFA 387 (402)
T ss_pred HHHHHHHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Confidence 5555544443 34555654 4689999999988888775555544 55556666544444433
No 45
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=4.3e-24 Score=213.57 Aligned_cols=311 Identities=12% Similarity=0.043 Sum_probs=200.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcc
Q 013096 62 LFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITA 140 (449)
Q Consensus 62 ~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s 140 (449)
...+...+..+..+..|.+.+++|.|+.++++..+...++..+++++.|+++||+||||+++.+.+++.++.+ +..++|
T Consensus 11 ~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~ 90 (392)
T PRK10473 11 LVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAET 90 (392)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCc
Confidence 3334444444566788888899999999999999999999999999999999999999999999988888776 677889
Q ss_pred hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHH
Q 013096 141 HPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTA 220 (449)
Q Consensus 141 ~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~ 220 (449)
++.+++.|+++|++.+...+...+ ++.|. .++++.++..+.......++.+++|.+++.+.+.. +|++.|++
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~-~i~~~----~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~---g~~~~~~~ 162 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFA-ILRDT----LDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF---PWQSLFYT 162 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHH-HHHHH----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc---ChHHHHHH
Confidence 999999999999998876665443 33333 34455666777666666666778888888876644 88988887
Q ss_pred HHHHHHHHHHHHHhccccCCCCCcc--hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-Cccch
Q 013096 221 SVFLSILGIICVSRGWTENPKMAFD--DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHL 295 (449)
Q Consensus 221 ~~~~~~~~~~~i~~~~~e~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~ 295 (449)
.....++..++.....||+++++++ +...+..++.++|++.+.......+.......+ ..+.|.+..+ + ++.+.
T Consensus 163 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~ 241 (392)
T PRK10473 163 MAAMGILVLLLSLFILKETRPARAPAASSKPRENSESLLNRFFLSRLVITTLSVTVILTF-VNTSPVLLMEQMGFSRGEY 241 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCCCcccCCccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH-HHhCHHHHHHHcCCCHHHH
Confidence 6655544444333445665433211 112233556778887765444333332222222 2345655443 3 33456
Q ss_pred HHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHH
Q 013096 296 GLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLR 375 (449)
Q Consensus 296 g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~ 375 (449)
+.......++.+++..+.+++.| |+++++.+..+..+..++.......... ......+.+...+.+...+... .
T Consensus 242 ~~~~~~~~~~~i~~~~~~~~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~--~ 315 (392)
T PRK10473 242 AIIMALTAGVSMTVSFSTPFALG---IFKPRTLMLTSQVLFLAAGITLALSPSH-AVSLFGITLICAGFSVGFGVAM--S 315 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHH--H
Confidence 77777777888899999999998 7888877666554444433333222211 1222223333334443343332 3
Q ss_pred hccCCCcchhHH
Q 013096 376 TMYVPNELRGGM 387 (449)
Q Consensus 376 ~~~~p~~~rg~~ 387 (449)
.+..|.++|+..
T Consensus 316 ~~~~~~~~~~g~ 327 (392)
T PRK10473 316 QALGPFSLRAGV 327 (392)
T ss_pred HHhccCcccccH
Confidence 445566666543
No 46
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=2.8e-24 Score=220.19 Aligned_cols=322 Identities=11% Similarity=0.061 Sum_probs=217.9
Q ss_pred HhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHH
Q 013096 69 MEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVA 147 (449)
Q Consensus 69 ~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~ 147 (449)
......+..|.+.+++|.|+.+.+++.+.+.++..++.++.|+++||+||||+++.+.++++++.+ +.++++++.+++.
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLA 104 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 334567778888899999999999998888888899999999999999999999998888887765 7788999999999
Q ss_pred HHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHH
Q 013096 148 NICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSIL 227 (449)
Q Consensus 148 R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~ 227 (449)
|+++|++.+...+...+ .+.|. .++++.++.++.......++..++|.+++++.+.. +||+.|.+......+
T Consensus 105 ~~l~g~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~---gw~~~f~~~~~~~~l 176 (471)
T PRK10504 105 RVLQGVGGAMMVPVGRL-TVMKI----VPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA---SWHWIFLINIPVGII 176 (471)
T ss_pred HHHHHhhhHHHHHHHHH-HHHHH----cCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc---cHHHHHHHHHHHHHH
Confidence 99999999987776544 33333 35555667777766666677888999999888755 899999987665544
Q ss_pred HHHHHHhccccCCCCCcc-hh-----------------------------------------------hh---hh--hHh
Q 013096 228 GIICVSRGWTENPKMAFD-DY-----------------------------------------------RT---SF--FTY 254 (449)
Q Consensus 228 ~~~~i~~~~~e~~~~~~~-~~-----------------------------------------------~~---~~--~~~ 254 (449)
..+......|+.+.++++ +. ++ ++ -.+
T Consensus 177 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (471)
T PRK10504 177 GAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLK 256 (471)
T ss_pred HHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHH
Confidence 444333333332211100 00 00 00 013
Q ss_pred hhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHH
Q 013096 255 IFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLY 331 (449)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~ 331 (449)
+++||++........+.... +.....+.|.+.+. + ++...++......++.+.+..+.+++.| |+++++.+..
T Consensus 257 l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~---r~g~~~~~~~ 332 (471)
T PRK10504 257 LFRTRTFSLGLAGSFAGRIG-SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVN---RFGYRRVLVA 332 (471)
T ss_pred HhcccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCchHHHHH
Confidence 56777776544433333322 22223456766543 2 3455677776667777778888999999 7888887766
Q ss_pred HHHHHHHHHHHHhc-cc-chhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHH
Q 013096 332 AFVVLGFVFSIIAY-DY-QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLF 402 (449)
Q Consensus 332 ~~~~~~~~l~~~~~-~~-~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~ 402 (449)
+..+.++....... .. .+.+.....+.+.+++.+...+..+.+..+.+|++.||+++|+.++...++...+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig 405 (471)
T PRK10504 333 TTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIG 405 (471)
T ss_pred HHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHH
Confidence 55544443332222 11 1222222334445677777788888888899999999999999887766654333
No 47
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.95 E-value=1.3e-24 Score=223.30 Aligned_cols=326 Identities=11% Similarity=0.024 Sum_probs=228.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhH
Q 013096 65 LASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPS 143 (449)
Q Consensus 65 l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~ 143 (449)
+......+..+..|.+.+++|.|+.+++++.+...++..++.++.|+++||+|||++++.+.+++.++++ +..++|++.
T Consensus 13 ~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (485)
T TIGR00711 13 MAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLEL 92 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHH
Confidence 4444455667788888899999999999999999999999999999999999999999999999988776 888899999
Q ss_pred HHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHH
Q 013096 144 VWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVF 223 (449)
Q Consensus 144 l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~ 223 (449)
+++.|+++|++.+...+...+ ++.|. .++++.++.++.......++..++|.+++++.+.+ +||+.|++...
T Consensus 93 l~~~~~~~G~~~~~~~~~~~~-~i~~~----~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---~w~~~f~~~~~ 164 (485)
T TIGR00711 93 MIIFRVIQGFGGGPLIPLSFS-TLLNI----YPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY---HWRWIFLINVP 164 (485)
T ss_pred HHHHHHHHHhhhhhHHHHHHH-HHHHH----CCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc---CceehhhhhhH
Confidence 999999999999987776654 33443 34555677777777777778888999999988755 89999988765
Q ss_pred HHHHHHHHHHhccccCCCCCcc--hh------------------h---------------------------------hh
Q 013096 224 LSILGIICVSRGWTENPKMAFD--DY------------------R---------------------------------TS 250 (449)
Q Consensus 224 ~~~~~~~~i~~~~~e~~~~~~~--~~------------------~---------------------------------~~ 250 (449)
+.++..+...+..||+++++++ +. + ++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (485)
T TIGR00711 165 IGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDN 244 (485)
T ss_pred HHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 5554444444344543322100 00 0 00
Q ss_pred h--hHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCc
Q 013096 251 F--FTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRT 325 (449)
Q Consensus 251 ~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~ 325 (449)
+ -.+++++|+++...+...+.....+.. ..+.|.+.++ + ++.+.|.......++.++++.+.+++.| |+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~---r~~~ 320 (485)
T TIGR00711 245 PLVDLRLFKYRNFTIGCVYMSLLGLGLYGS-FYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGD---KIDP 320 (485)
T ss_pred CccCHHHHcCCChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCc
Confidence 0 013556666665544444433333332 3467877654 2 4456777777778888999999999999 7887
Q ss_pred hhHHHHHHHHHHHHHHHHh--cccc-hhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHH
Q 013096 326 EDCLLYAFVVLGFVFSIIA--YDYQ-EIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLF 402 (449)
Q Consensus 326 ~~~l~~~~~~~~~~l~~~~--~~~~-~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~ 402 (449)
++.+..+..+.+++..... ...+ +.+......++.+++.|...+.......+..|+++||++.|+.+...+++...+
T Consensus 321 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig 400 (485)
T TIGR00711 321 RKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIG 400 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 7776666555554444333 2221 222334445566777887776666777788899999999999887777654333
No 48
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=1.1e-23 Score=209.95 Aligned_cols=337 Identities=15% Similarity=0.045 Sum_probs=226.3
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHH----HHHHHHHHHHHHHH
Q 013096 62 LFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCL----IFFILHLFVGVWKS 137 (449)
Q Consensus 62 ~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll----~~~~~~~~~~l~~~ 137 (449)
.++.-....++..|++|.+.+++|.|++|+|.+.+...+...+.++++|+++||+|||+... .+..++.+ ..+..
T Consensus 12 ~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~-~~~~~ 90 (382)
T TIGR00902 12 GFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA-AFSAG 90 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-HHHHh
Confidence 34444555677889998888999999999999999999999999999999999999855432 22222222 12446
Q ss_pred hcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchh
Q 013096 138 ITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPS 217 (449)
Q Consensus 138 ~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~ 217 (449)
+++++.+++.|+++|.+.+...|..++. ..+.. + +.++.++......+++.+++|.+++++.+.+ |||..
T Consensus 91 ~~~~~~l~~~~~l~~~~~~~~~p~~~al-~~~~~-~-----~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~---g~~~~ 160 (382)
T TIGR00902 91 AHNAWLLFIAIGLFALFFSAGMPIGDAL-ANTWQ-K-----QFGLDYGKVRLIGSAAFIIGSALFGGLIGMF---DEQNI 160 (382)
T ss_pred hhhHHHHHHHHHHHHHHHccchhHHHHH-HHHHH-H-----HcCCCccHHHHHHHHHHHHHHHHHHHHHHHc---ChhHH
Confidence 7899999999999999888777776653 33321 1 1222344555566677888999999988865 89999
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCCc---c-hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-C
Q 013096 218 STASVFLSILGIICVSRGWTENPKMAF---D-DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-R 291 (449)
Q Consensus 218 f~~~~~~~~~~~~~i~~~~~e~~~~~~---~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~ 291 (449)
|.+......+..+ .....|+.+++++ + +.+.+.+++++|||+++.+.+...+.......+ ..+.|.+.++ + +
T Consensus 161 f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~l~~~g~s 238 (382)
T TIGR00902 161 LAILTAGLAFMLI-GFLIKPTIPPKDAIPEDESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAY-YGFSAIYWQAAGIS 238 (382)
T ss_pred HHHHHHHHHHHHH-HHHcCCCCCCCccccccccccchhHHHHHcChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCC
Confidence 8875444332222 2222232222111 1 111234678899999988766655555544433 3356666654 2 4
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHH
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSL 371 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~ 371 (449)
+...|..+....++.+++..+.+++.| |++.++.+..+....++......+.+ +.+..+...++.++..|+..+..
T Consensus 239 ~~~~g~l~~~~~~~~i~~~~~~~~l~~---r~g~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~q~l~g~~~~~~~~~~ 314 (382)
T TIGR00902 239 ASATGLLWGIGVLAEIIIFAFSNKLFQ---NCSARDLLLISAIACVGRWAIIGAIE-AFPLIFLLQILHCGTFAVCHLAA 314 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhHHHHh---hCCHHHHHHHHHHHHHHHHHHHHhHh-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788887777888889999999999 78888887777666665554444433 33444455567778888899999
Q ss_pred HHHHhccCCCcchhHHHHhhHH-HHHHHHHHHHHHh-HHhhhcchhH
Q 013096 372 ARLRTMYVPNELRGGMISLSLA-PANAAILLFLLLR-GFYRNIENAA 416 (449)
Q Consensus 372 ~~~~~~~~p~~~rg~~~~~~~~-~~~~~~~~~~~~g-~~~~~~~~~~ 416 (449)
..+.++. |+++|++..++++. ..+++...+++.+ .+.+..+...
T Consensus 315 ~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~ 360 (382)
T TIGR00902 315 MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGT 360 (382)
T ss_pred HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 9999888 99999999888764 3445554455554 4446665533
No 49
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=1.7e-23 Score=209.37 Aligned_cols=353 Identities=14% Similarity=0.035 Sum_probs=202.9
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHHHH-HHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHH-HHHHHHHHHH
Q 013096 56 QRNFLLLFSLASVMEGLWSVFGEYE-LVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCL-IFFILHLFVG 133 (449)
Q Consensus 56 ~~~~~~~~~l~~~~~~~~~~~~~~l-~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll-~~~~~~~~~~ 133 (449)
...++...++...+..+..|+.+.. .+++|.|++++|.+.+...+...+.+++.|.++||+||||.++ .+.+..++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~ 96 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLAC 96 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 3445566677777777788887664 4689999999999877666655555556555599999998865 4445444544
Q ss_pred H-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 013096 134 V-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKK 212 (449)
Q Consensus 134 l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~ 212 (449)
. ..++++++.+++.+.+.|...+...+...+ +..+..+++ +++.+...+....+..++.+++|.+++++.+..
T Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~--- 170 (393)
T PRK15011 97 TLFAWNRNYFVLLFVGVFLSSFGSTANPQMFA-LAREHADKT--GREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF--- 170 (393)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHhhhc--cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc---
Confidence 4 667888988766655444333444455443 333332111 112233334555566677888999999988755
Q ss_pred CcchhHHHHHHHHHHHHHHHHhccccCCCCCcchhhhhhhHhhhcChh-HHHHHHHHHHHHHHHHHHHHHhhhhhccC--
Q 013096 213 GVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKR-IWLLVLAQACLQFSIALFWILWAPTLVAD-- 289 (449)
Q Consensus 213 g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-- 289 (449)
|||..|+..+...++..+......||.+++++++.. ..+...++++ .+........... .+.....|.|.+.++
T Consensus 171 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~l~~~~ 247 (393)
T PRK15011 171 SFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG--TLEAPRRNRRDTLLLFVICTLMWG-TNSLYIINMPLFIINEL 247 (393)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc--cccccccccccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHc
Confidence 999999886665544444444445665432211110 1111223333 2222222222222 232234467877654
Q ss_pred C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhh
Q 013096 290 G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLIL 368 (449)
Q Consensus 290 ~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~ 368 (449)
+ ++.+.+.+.....++.+++..+.+++.| |+++++....+.....+........+ +.+..+....+.+++.|...
T Consensus 248 ~~~~~~~g~~~~~~~~~~i~~~~~~G~l~d---r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~~~~~g~~~ 323 (393)
T PRK15011 248 HLPEKLAGVMMGTAAGLEIPTMLIAGYFAK---RLGKRFLMRVAAVAGVCFYAGMLMAH-SPAILLGLQLLNAIYIGILG 323 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhChHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHH
Confidence 2 3344666665555667788899999999 78877765544333222222222222 22222333333444555555
Q ss_pred hHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhH-HhhhcchhHHHHHHH
Q 013096 369 PSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRG-FYRNIENAAMVAFAA 422 (449)
Q Consensus 369 p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~ 422 (449)
+....+.+|..|+ .||+++++.+...+++...++..++ ..+..+.+..+.++.
T Consensus 324 ~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~ 377 (393)
T PRK15011 324 GIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFAL 377 (393)
T ss_pred HHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 6666677888885 4999999987777776555555444 445456555444433
No 50
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.94 E-value=9.3e-24 Score=217.73 Aligned_cols=334 Identities=14% Similarity=0.093 Sum_probs=210.0
Q ss_pred hhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHH
Q 013096 71 GLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANI 149 (449)
Q Consensus 71 ~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~ 149 (449)
....+..+.+.+++|.|+.+.+.+.+..+++..+++++.|+++||+|||++++.+.++.+++++ +.+++|++.+++.|+
T Consensus 37 ~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (496)
T PRK03893 37 VLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARL 116 (496)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3456677788889999999999999999999999999999999999999999999988888776 777899999999999
Q ss_pred HHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHH
Q 013096 150 CLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGI 229 (449)
Q Consensus 150 l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~ 229 (449)
++|++.+...+...+ ++.|. +++++.++.++.......++.+++|.+++++.+.+ +||+.|.+.....++..
T Consensus 117 l~G~~~~~~~~~~~~-~~~~~----~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~w~~~f~~~~~~~~~~~ 188 (496)
T PRK03893 117 VIGMGMAGEYGSSAT-YVIES----WPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW---GWRALFFIGILPIIFAL 188 (496)
T ss_pred HHHHHHHHHHHHHHH-HHHHH----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CHHHHHHHHHHHHHHHH
Confidence 999998877766554 33333 45555677777777777788888999888887754 89999887655444332
Q ss_pred HHHHhccccCCCC--Cc-chhh-hhhhHhhhcC-hhHHH---------------------------H-------------
Q 013096 230 ICVSRGWTENPKM--AF-DDYR-TSFFTYIFGD-KRIWL---------------------------L------------- 264 (449)
Q Consensus 230 ~~i~~~~~e~~~~--~~-~~~~-~~~~~~l~~~-~~~~~---------------------------~------------- 264 (449)
...+..||+++. ++ ++.. ++..+...++ ++... .
T Consensus 189 -~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (496)
T PRK03893 189 -WLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMV 267 (496)
T ss_pred -HHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 233345554321 10 0000 0001111110 00000 0
Q ss_pred -----------HHHHHHHHHHHHH-HHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHH
Q 013096 265 -----------VLAQACLQFSIAL-FWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCL 329 (449)
Q Consensus 265 -----------~~~~~~~~~~~~~-~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l 329 (449)
......+....+. ....+.|.++++ + +..+.+.+.+...++.++|..+.+++.| |+++++.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~d---r~g~~~~~ 344 (496)
T PRK03893 268 QSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGD---WLGTRKAY 344 (496)
T ss_pred HhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHHH
Confidence 0000000000000 123467877742 2 3456778888888889999999999999 78877766
Q ss_pred HHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHH-HHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-h
Q 013096 330 LYAFVVLGFVFSIIAY-DYQEIGILVALFCLFH-ACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-R 406 (449)
Q Consensus 330 ~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~l~~-~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g 406 (449)
..+..+.++....... ...+.+.........+ .+.+ ..+...++.++.+|++.||+++|+.+...+++...++.. |
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g 423 (496)
T PRK03893 345 VCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQG-ISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGA 423 (496)
T ss_pred HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcc-cchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHH
Confidence 6554433333222222 2222221111111212 2222 345556677899999999999999887777765455554 4
Q ss_pred HHhhhcchhHH
Q 013096 407 GFYRNIENAAM 417 (449)
Q Consensus 407 ~~~~~~~~~~~ 417 (449)
...+..+....
T Consensus 424 ~l~~~~g~~~~ 434 (496)
T PRK03893 424 LIAQRLDLGTA 434 (496)
T ss_pred HHhccCChHHH
Confidence 44455665443
No 51
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.94 E-value=1e-23 Score=216.15 Aligned_cols=316 Identities=12% Similarity=0.015 Sum_probs=187.3
Q ss_pred hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHH
Q 013096 72 LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANIC 150 (449)
Q Consensus 72 ~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l 150 (449)
...|+.+.+.+++|+|+.|.+.+.+..+++..+++++.|+++||+|||+++..+.++++++.+ +.+++|++.+++.|++
T Consensus 54 ~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l 133 (476)
T PLN00028 54 AAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFF 133 (476)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 456778888899999999999988888888899999999999999999999998888887765 7778999999999999
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHH----HhHHHHHHHHHHHHHHhcc--cccCCcchhHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTF----FESAALIGGQVLANWLVGI--DVKKGVVPSSTASVFL 224 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~----~~~~~~i~a~~lg~~l~~~--~~~~g~~~~f~~~~~~ 224 (449)
+|++.+...+. .. .+.|. +++++.+++.+.... +..+++.+.|.+...+.+. ....|||+.|++.+++
T Consensus 134 ~G~~~~~~~~~-~~-~i~~~----~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l 207 (476)
T PLN00028 134 IGFSLATFVSC-QY-WMSTM----FNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLL 207 (476)
T ss_pred HHHHHHhhHHH-HH-HHHHh----cChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHH
Confidence 99998754332 22 33443 333344455554432 3333333344443332221 0013899999986655
Q ss_pred HHHHHHHHHhccccCCCCC----cch------hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-C
Q 013096 225 SILGIICVSRGWTENPKMA----FDD------YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-R 291 (449)
Q Consensus 225 ~~~~~~~i~~~~~e~~~~~----~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~ 291 (449)
.++..+...+..++.++.+ +++ ...+.+++.+++++++.+.+...+.... ......|.|.++.+ + +
T Consensus 208 ~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~l~~~~g~s 286 (476)
T PLN00028 208 HIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGV-ELTMDNIIAEYFYDRFGLS 286 (476)
T ss_pred HHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHH-HHHHHhHHHHHHHHhcCCC
Confidence 5444333333222222111 000 0112356677888887665543332222 22234577877643 3 3
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCch-----h-HH-HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHh
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE-----D-CL-LYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACV 364 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~-----~-~l-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 364 (449)
....+.......++.++|..+.++++| |+++| | .. .....+.++......... +....+..+++++++.
T Consensus 287 ~~~a~~~~~~~~~~~~ig~~~~G~lsD---r~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~-~~~~~~~~~~l~~~~~ 362 (476)
T PLN00028 287 LETAGAIAASFGLMNLFARPAGGYLSD---VAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN-SLGAAIVVMILFSIFV 362 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHH---HHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHH
Confidence 344566666777788889999999998 44322 2 12 222222333222222222 2222233334444444
Q ss_pred hhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHH
Q 013096 365 GLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 399 (449)
Q Consensus 365 g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~ 399 (449)
+...+...++..+.. ++.||++.|+.+...+++.
T Consensus 363 ~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~ 396 (476)
T PLN00028 363 QAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGA 396 (476)
T ss_pred HHhhhhhcccCcccC-hhhchhhhhhhhccccHHH
Confidence 444444445555554 4789999998766555543
No 52
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=1e-23 Score=216.48 Aligned_cols=337 Identities=12% Similarity=0.060 Sum_probs=201.6
Q ss_pred hhhHHHHHHHHHHHHHhhhh----hHHHHHHHHHh--------CCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHH
Q 013096 54 PFQRNFLLLFSLASVMEGLW----SVFGEYELVYY--------GVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKV 121 (449)
Q Consensus 54 ~~~~~~~~~~~l~~~~~~~~----~~~~~~l~~~~--------g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ 121 (449)
+.+.+...+..++.+.++++ ++..+.+.+++ +.++.+.+++.+..+++..+++++.|+++||+||||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 45566666666666666543 44445555555 8899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHh------------cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHH
Q 013096 122 CLIFFILHLFVGV-WKSI------------TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMT 188 (449)
Q Consensus 122 ll~~~~~~~~~~l-~~~~------------~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~ 188 (449)
++.+.+++.++.+ +++. ++++.+++.|+++|++.|...+...+ ++.|.. ++++.++.++..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~i~e~~----~~~~rg~~~~~~~ 162 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPM-YIAEIA----PAHIRGKLVSFNQ 162 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHH-HHHhhC----ChhhhhHHHHHHH
Confidence 9999999887665 4431 23567899999999999998887655 455553 3344556666666
Q ss_pred HHhHHHHHHHHHHHHHHhcc-----cccCCcchhHHHHHHHHHHHHHHHHhccccCCCC----Ccchh------------
Q 013096 189 FFESAALIGGQVLANWLVGI-----DVKKGVVPSSTASVFLSILGIICVSRGWTENPKM----AFDDY------------ 247 (449)
Q Consensus 189 ~~~~~~~i~a~~lg~~l~~~-----~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~----~~~~~------------ 247 (449)
....++.++++.++..+... ...++||++|++.++..++..+. ....||+++. ++++.
T Consensus 163 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~ 241 (479)
T PRK10077 163 FAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNT 241 (479)
T ss_pred HHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCCh
Confidence 55556666666655544311 01358999999876665555433 3456887531 10000
Q ss_pred -hh---hhhHhhhc-----ChhHHHHH---HHH----HHH-HHHHHHHHHHhhhhhccC-CC-ccchHHHHHHHHHHHHH
Q 013096 248 -RT---SFFTYIFG-----DKRIWLLV---LAQ----ACL-QFSIALFWILWAPTLVAD-GR-EVHLGLIFPSLLGARML 308 (449)
Q Consensus 248 -~~---~~~~~l~~-----~~~~~~~~---~~~----~~~-~~~~~~~~~~~~p~~~~~-~~-~~~~g~i~~~~~~~~~l 308 (449)
.+ +..++..+ +++.+... +.. ..+ ....+....++.|.+..+ +. ....+.......+...+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i 321 (479)
T PRK10077 242 LATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLT 321 (479)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHH
Confidence 00 01111111 11111110 000 001 011111223456766543 22 22233444445567788
Q ss_pred hhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhc--ccchh-HHHHHHHHHHHHHhhh-hhhHHHHHHhccCCCcch
Q 013096 309 GSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAY--DYQEI-GILVALFCLFHACVGL-ILPSLARLRTMYVPNELR 384 (449)
Q Consensus 309 g~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~--~~~~~-~~~~~~~~l~~~~~g~-~~p~~~~~~~~~~p~~~r 384 (449)
++.+.+++.| |+++|+.+..+..+.+++...... ..+.. .......+.++++.+. ..|....+.+|.+|+++|
T Consensus 322 ~~~~~g~l~d---r~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 398 (479)
T PRK10077 322 FTVLAIMTVD---KFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIR 398 (479)
T ss_pred HHHHHHHHHH---HhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHH
Confidence 8999999999 788887777666555544433221 11111 1122223333333333 237778889999999999
Q ss_pred hHHHHhhHHHHHHHH
Q 013096 385 GGMISLSLAPANAAI 399 (449)
Q Consensus 385 g~~~~~~~~~~~~~~ 399 (449)
++++|+.....+++.
T Consensus 399 ~~~~g~~~~~~~~g~ 413 (479)
T PRK10077 399 GKALAIAVAAQWIAN 413 (479)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998877666554
No 53
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=2.6e-24 Score=222.37 Aligned_cols=352 Identities=14% Similarity=0.047 Sum_probs=219.7
Q ss_pred HHHHHHHHHhCCC---hHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHH
Q 013096 75 VFGEYELVYYGVA---KEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANIC 150 (449)
Q Consensus 75 ~~~~~l~~~~g~s---~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l 150 (449)
++.+.+.+|++++ +.+.++..+..+++..+++++.|+++||+|||++++++.++..++++ +++++|++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4455666799998 89999999999999999999999999999999999999988888776 7788999999999999
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII 230 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~ 230 (449)
+|++.+...+...+ ++.|. .++++.++..+.......++.+++|.++..+. +||+.|.+..+..++..+
T Consensus 190 ~G~~~~~~~~~~~~-~~~e~----~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------~wr~~~~~~~i~~~~~~~ 258 (505)
T TIGR00898 190 VGMGIGGIWVQAVV-LNTEF----LPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP------DWRWLQLAVSLPTFLFFL 258 (505)
T ss_pred HHhhccchHHHHHH-Hhhee----cChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHH
Confidence 99999987766543 44443 33344455555555555666677777765542 588898877665555444
Q ss_pred HHHhccccCCCC-------Cc--c-----------------------h---hh--hhhhHhhhcChhHHHHHHHHHHHHH
Q 013096 231 CVSRGWTENPKM-------AF--D-----------------------D---YR--TSFFTYIFGDKRIWLLVLAQACLQF 273 (449)
Q Consensus 231 ~i~~~~~e~~~~-------~~--~-----------------------~---~~--~~~~~~l~~~~~~~~~~~~~~~~~~ 273 (449)
.. ...||+++. ++ + + .. +..+++++++|+.+...+...+...
T Consensus 259 ~~-~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (505)
T TIGR00898 259 LS-WFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWF 337 (505)
T ss_pred HH-HhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHH
Confidence 33 346776421 00 0 0 00 0245677888777655443322221
Q ss_pred HHHHHHHHhhhhhccCCCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccch-hHH
Q 013096 274 SIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQE-IGI 352 (449)
Q Consensus 274 ~~~~~~~~~~p~~~~~~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~-~~~ 352 (449)
.. .+.....+....+ ............++..+.+..+.+++.| |+++|+.+.....+.+++.+.....++. .+.
T Consensus 338 ~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~l~d---r~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~ 412 (505)
T TIGR00898 338 TT-AFSYYGLVLDLGN-LGGNIYLDLFISGLVELPAKLITLLLID---RLGRRYTMAASLLLAGVALLLLLFVPVDLYFL 412 (505)
T ss_pred HH-HHHHHHHhccccc-cCCChHHHHHHHHHHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHHHHHHHHcCCCchHH
Confidence 11 1111112222211 1111222223344566778888999999 7888877776665555554443333222 122
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhcchhHH-HHHHHHHHHHHHHH
Q 013096 353 LVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAM-VAFAALGLFIAAGC 431 (449)
Q Consensus 353 ~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~ 431 (449)
.....++..++.+..++....+.+|.+|++.|++++|+.+....++...++.+.++ ++.+.... .+++++.++ +.+.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~~-~~~~~~~~~~~~~~~~~~-~~~~ 490 (505)
T TIGR00898 413 RTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYL-GEKWLFLPLVLFGGLALL-AGIL 490 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHHH-HHHHHhhHHHHHHHHHHH-HHHH
Confidence 23333444556666778888888999999999999999888777765555544333 33332222 333333333 3334
Q ss_pred HHHHHHhhcCCCcc
Q 013096 432 MHVLKRWGKQPYQN 445 (449)
Q Consensus 432 ~~~~~~~~~~~~~~ 445 (449)
..+++++++++.+|
T Consensus 491 ~~~lpet~~~~l~~ 504 (505)
T TIGR00898 491 TLFLPETKGVPLPE 504 (505)
T ss_pred HHcCcCCCCCCCCC
Confidence 45566666555443
No 54
>TIGR00895 2A0115 benzoate transport.
Probab=99.94 E-value=1.9e-23 Score=208.20 Aligned_cols=321 Identities=17% Similarity=0.180 Sum_probs=210.3
Q ss_pred hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHH
Q 013096 72 LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANIC 150 (449)
Q Consensus 72 ~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l 150 (449)
..+++.|.+.+++|.++.+++.+.+...++..+++++.|+++||+|||+++..+.++..++.+ +...+|++.+++.|++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (398)
T TIGR00895 35 AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFL 114 (398)
T ss_pred HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 345666777789999999999999999999999999999999999999999999888877665 6678899999999999
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII 230 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~ 230 (449)
+|++.+...+...+ ++.|. .++++.++.++.......++..+++.+++++.+.. +|+..|.+.+....+..+
T Consensus 115 ~g~~~~~~~~~~~~-~~~~~----~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~ 186 (398)
T TIGR00895 115 AGLGLGGLMPNLNA-LVSEY----APKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF---GWRSLFYVGGIAPLLLLL 186 (398)
T ss_pred HhcccccchhhHHH-HHHHH----cCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc---cceeehhhhhhHHHHHHH
Confidence 99999887776655 34443 23344556667666666777788888888887755 888888876443333333
Q ss_pred HHHhccccCCCC---C--cc------------------------h---hhhhhhHhhhcChh---HHHHHHHHHHHHHHH
Q 013096 231 CVSRGWTENPKM---A--FD------------------------D---YRTSFFTYIFGDKR---IWLLVLAQACLQFSI 275 (449)
Q Consensus 231 ~i~~~~~e~~~~---~--~~------------------------~---~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~ 275 (449)
+.....||+++. + ++ + ..++.++.++++++ .+.+..... .....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 265 (398)
T TIGR00895 187 LLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYF-MLLVG 265 (398)
T ss_pred HHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHH-HHHHH
Confidence 333344554321 0 00 0 00111222333322 222222211 22222
Q ss_pred HHHHHHhhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHH
Q 013096 276 ALFWILWAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGIL 353 (449)
Q Consensus 276 ~~~~~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 353 (449)
+.....|.|.+..+ + ++...+.......++.++|..+.+++.| |+++++.. ....+.++..........+....
T Consensus 266 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 341 (398)
T TIGR00895 266 VYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLAD---RLGPRVTA-LLLLLGAVFAVLVGSTLFSPTLL 341 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcchHHHH-HHHHHHHHHHHHHHHHhhCHHHH
Confidence 33345577855543 2 3445677777778888999999999999 67665333 22222222222222211222333
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH
Q 013096 354 VALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL 405 (449)
Q Consensus 354 ~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~ 405 (449)
....++.+++.+...+...++.+|.+|++.||+++|+.+...+++...++..
T Consensus 342 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 393 (398)
T TIGR00895 342 LLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPIL 393 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455566777888888899999999999999999999888777765445443
No 55
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.93 E-value=2.7e-22 Score=200.98 Aligned_cols=304 Identities=11% Similarity=-0.012 Sum_probs=183.7
Q ss_pred HHHHHhh-hhhHHHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh---
Q 013096 65 LASVMEG-LWSVFGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI--- 138 (449)
Q Consensus 65 l~~~~~~-~~~~~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~--- 138 (449)
...+..| +.+|..+.+-+ ++|+|++|.+++.++..+++.++.++.|++.||+|.|+++.++.++.++.++ +.++
T Consensus 44 ~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~ 123 (462)
T PRK15034 44 LLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQN 123 (462)
T ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4444555 35677766665 8999999999999999999999999999999999999999999998887765 6655
Q ss_pred --cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHH----HHHHHHHHH-HHhccc--
Q 013096 139 --TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAA----LIGGQVLAN-WLVGID-- 209 (449)
Q Consensus 139 --~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~----~i~a~~lg~-~l~~~~-- 209 (449)
+|++.+++.|++.|++ +..++.... .++ +-+++++.+++++.....+..+ ..++|.+.. .+....
T Consensus 124 ~~~s~~~lli~r~l~Gig-g~~f~~~~~-~vs----~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~ 197 (462)
T PRK15034 124 PNTPFGIFIVIALLCGFA-GANFASSMG-NIS----FFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGV 197 (462)
T ss_pred cCCCHHHHHHHHHHHHHH-HHhHHHHHH-HHH----HHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7999999999999998 444444322 222 3356666777777664333333 334443322 121211
Q ss_pred --------ccCCcchhHHHHHHHHHHHHHHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHH
Q 013096 210 --------VKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWIL 281 (449)
Q Consensus 210 --------~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (449)
...+||..+++-.++.++..++.++..++.++ + ++ ..+.+..++|||++|.+++...+.++.+..+ ..
T Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-~-~~-~~~~~~~vlk~~~~Wllslly~~tFG~fvg~-s~ 273 (462)
T PRK15034 198 NGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-S-RA-SIADQLPVLQRLHLWLLSLLYLATFGSFIGF-SA 273 (462)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-c-cc-CHHHHHHHhCCCchhHHHHHHHHHHHHHHHH-HH
Confidence 01135555555444443433333333333221 1 11 1234667999999998887665555443333 55
Q ss_pred hhhhhccCCCc-cchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHH--Hhccc---chhHHHHH
Q 013096 282 WAPTLVADGRE-VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI--IAYDY---QEIGILVA 355 (449)
Q Consensus 282 ~~p~~~~~~~~-~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~--~~~~~---~~~~~~~~ 355 (449)
|.|.+.++..+ ...........+...++.++.|++.| |++.+|++..++..+.++... ..... .+.+....
T Consensus 274 ~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LAD---RiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~ 350 (462)
T PRK15034 274 GFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISD---KFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYA 350 (462)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHH---hcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHH
Confidence 78888765322 21111111223456677789999999 888888777665444333221 11211 12333344
Q ss_pred HHHHHHHHhhhhhhHHHHHHhccCCC
Q 013096 356 LFCLFHACVGLILPSLARLRTMYVPN 381 (449)
Q Consensus 356 ~~~l~~~~~g~~~p~~~~~~~~~~p~ 381 (449)
.++...++.|+.+.+...++.+.+|+
T Consensus 351 ~~~~l~~~~G~gngsvfk~ip~~f~~ 376 (462)
T PRK15034 351 VFMGLFLTAGLGSGSTFQMIAVIFRQ 376 (462)
T ss_pred HHHHHHHHhcccchHHHHhhHHHHhh
Confidence 44444566676666666666666664
No 56
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.93 E-value=2.1e-22 Score=200.80 Aligned_cols=331 Identities=15% Similarity=0.100 Sum_probs=211.4
Q ss_pred HHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCch----HHHHHHHHHHHHHHHHHHhcchh
Q 013096 67 SVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQK----KVCLIFFILHLFVGVWKSITAHP 142 (449)
Q Consensus 67 ~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr----~~ll~~~~~~~~~~l~~~~~s~~ 142 (449)
..+.++..|++|...+|+|.|+.++|++.+++.+...+++++.|+++||+||| +.+.+....... ..+..++|++
T Consensus 17 ~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 95 (382)
T PRK11128 17 FFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV-AFWFGAHSFW 95 (382)
T ss_pred HHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH-HHHHhcccHH
Confidence 34456788999888899999999999999999999999999999999999994 333322222211 1234468899
Q ss_pred HHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHH
Q 013096 143 SVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASV 222 (449)
Q Consensus 143 ~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~ 222 (449)
.+++.|+++|++.+...+..++ +..+..++ + ++.++.....+.++..++|.+++++.+++ |||.+|+..+
T Consensus 96 ~l~i~~~l~g~~~~~~~~~~~a-~~~~~~~~--~----~~a~~~~~~~~~lg~~igp~lgg~l~~~~---g~~~~f~~~~ 165 (382)
T PRK11128 96 LLFVAIGLFNLFFSPLVPLTDA-LANTWQKQ--I----GLDYGKVRLWGSIAFVIGSALTGKLVSWF---GEQAILWILT 165 (382)
T ss_pred HHHHHHHHHHHHHcccccHHHH-HHHHHHhh--c----cCCcchHHHHHHHHHHHHHHHHHHHHHHc---ChhHHHHHHH
Confidence 9999999999998877776554 33333211 1 11222333344566778999999988765 8999998765
Q ss_pred HHHHHHHHHHHhccccCCCCCc--ch--hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchH
Q 013096 223 FLSILGIICVSRGWTENPKMAF--DD--YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLG 296 (449)
Q Consensus 223 ~~~~~~~~~i~~~~~e~~~~~~--~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g 296 (449)
...++..+... ..||.+++++ ++ ...+.+++++|||+++...+...+.......+ ....|.+.++ + ++...|
T Consensus 166 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~g~s~~~~g 243 (382)
T PRK11128 166 AGVASMLLGQL-LRPTIMPQGESRQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAY-YGFSAIYWQAAGYSASTIG 243 (382)
T ss_pred HHHHHHHHHHH-ccCCCCCccccccccccccchHHHHHcChhHHHHHHHHHHHHHHhHhH-HHHHHHHHHHCCCCHhHHH
Confidence 54443333232 3344332211 11 11245789999999887655444443332222 2234555443 2 344578
Q ss_pred HHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHh
Q 013096 297 LIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRT 376 (449)
Q Consensus 297 ~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~ 376 (449)
..++...++.+++..+.+++.| |+++++.+..+....++........+ +.+..+...++.+++.+...+....+..
T Consensus 244 ~~~~~~~~~~~~~~~~~g~l~~---r~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 319 (382)
T PRK11128 244 YLWSLGVVAEVLIFAFSNRLFR---RWSARDLLLLSAICGVVRWGLMGSTT-ALPWLIVIQILHCGTFTVCHLAAMRYIA 319 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HCCHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777888889999998 78888877766655555444333332 3344455566677788888888888877
Q ss_pred ccCCCcchhHHHHhhHHH-HHHHHHHHHHH-hHHhhhcchh
Q 013096 377 MYVPNELRGGMISLSLAP-ANAAILLFLLL-RGFYRNIENA 415 (449)
Q Consensus 377 ~~~p~~~rg~~~~~~~~~-~~~~~~~~~~~-g~~~~~~~~~ 415 (449)
+. |++++++..+..... .+.+...++.. |.+.+..+..
T Consensus 320 ~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~ 359 (382)
T PRK11128 320 AR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAG 359 (382)
T ss_pred HC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 76 566678888876533 33343334444 4445655543
No 57
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=1.3e-23 Score=214.38 Aligned_cols=358 Identities=15% Similarity=0.118 Sum_probs=208.9
Q ss_pred hhHHHHHHHHHhCCC--------hHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh---cc
Q 013096 73 WSVFGEYELVYYGVA--------KEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI---TA 140 (449)
Q Consensus 73 ~~~~~~~l~~~~g~s--------~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~---~s 140 (449)
..+..+.+..+++.+ ..+.+++.+...++..+++++.|+++||+||||+++.+.+++.++++ +... .+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
T TIGR00879 47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALS 126 (481)
T ss_pred hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344555556666666 88999999999999999999999999999999999999998888765 5333 45
Q ss_pred hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHH---HHHhcccccCCcchh
Q 013096 141 HPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLA---NWLVGIDVKKGVVPS 217 (449)
Q Consensus 141 ~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg---~~l~~~~~~~g~~~~ 217 (449)
++.+++.|+++|++.+...+...+ ++.|. .++++.++..+.......++.++++.++ ....+. .+||++
T Consensus 127 ~~~~~~~r~l~G~~~~~~~~~~~~-~i~~~----~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~---~~w~~~ 198 (481)
T TIGR00879 127 VEMLIVGRVLLGIGVGIASALVPM-YLSEI----APKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT---LGWRIP 198 (481)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHH-HHHcc----CChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCC---ccHHHH
Confidence 568999999999999987766543 44443 3444556667776666677777888877 444333 489999
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCC-----Ccch---h----------h----h-----------------hhhHhhhcC
Q 013096 218 STASVFLSILGIICVSRGWTENPKM-----AFDD---Y----------R----T-----------------SFFTYIFGD 258 (449)
Q Consensus 218 f~~~~~~~~~~~~~i~~~~~e~~~~-----~~~~---~----------~----~-----------------~~~~~l~~~ 258 (449)
|.+.+...++..+. ....||+++. +.++ . . + ..++.+++.
T Consensus 199 f~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (481)
T TIGR00879 199 LGLQLIPAGLLFLG-LFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSS 277 (481)
T ss_pred HHHHHHHHHHHHHH-HhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhc
Confidence 99865555444332 3345665321 0000 0 0 0 001122221
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHH
Q 013096 259 -----KRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLY 331 (449)
Q Consensus 259 -----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~ 331 (449)
++.........+...........+.|.+.++ + +....+.......++.+++..+.+++.| |+++++.+..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d---~~~~~~~~~~ 354 (481)
T TIGR00879 278 TRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVD---RFGRRPLLLI 354 (481)
T ss_pred CchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHHHHH
Confidence 1111111111111111112234456766543 3 2333455555666778889999999999 7777777666
Q ss_pred HHHHHHHHHHHHh---cccch------hHHHHHHHHHHHHHhhh-hhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHH
Q 013096 332 AFVVLGFVFSIIA---YDYQE------IGILVALFCLFHACVGL-ILPSLARLRTMYVPNELRGGMISLSLAPANAAILL 401 (449)
Q Consensus 332 ~~~~~~~~l~~~~---~~~~~------~~~~~~~~~l~~~~~g~-~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~ 401 (449)
+..+.++++.... ....+ ....+...+++..+.+. ..+....+..|.+|++.||+++++.+...+++...
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i 434 (481)
T TIGR00879 355 GAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFI 434 (481)
T ss_pred HHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 5544444433322 11111 12222222233333332 23566677789999999999999988887776544
Q ss_pred HHH-HhHHhhhcchhHHH-HHHHHHHHHHHHHHHHHHHhhcCC
Q 013096 402 FLL-LRGFYRNIENAAMV-AFAALGLFIAAGCMHVLKRWGKQP 442 (449)
Q Consensus 402 ~~~-~g~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~ 442 (449)
++. .+.+.++.+....+ ..++++++.+.......++.++++
T Consensus 435 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 477 (481)
T TIGR00879 435 VGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRT 477 (481)
T ss_pred HHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCC
Confidence 443 35455544443322 233333333333333345444433
No 58
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.93 E-value=6.9e-23 Score=211.62 Aligned_cols=389 Identities=11% Similarity=0.036 Sum_probs=223.7
Q ss_pred CcchhhhHHHHHHHHHHHHHhhhh----hHHHHHHHHH-----hCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchH
Q 013096 50 SSFVPFQRNFLLLFSLASVMEGLW----SVFGEYELVY-----YGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKK 120 (449)
Q Consensus 50 ~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~l~~~-----~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~ 120 (449)
-++.+.|.....+..++.+.|+++ +...+.+-.+ .+.++.+.+++.+...++..+++++.|+++||+|||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~ 87 (502)
T TIGR00887 8 APFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKR 87 (502)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 345677777776666777776654 3333333232 2345566778888898999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHhcc------hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHH
Q 013096 121 VCLIFFILHLFVGV-WKSITA------HPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESA 193 (449)
Q Consensus 121 ~ll~~~~~~~~~~l-~~~~~s------~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~ 193 (449)
++.++.+++.++++ ++++++ ++.+++.|+++|++.|...+.... ++.|. .|.++.++..+.......+
T Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~-~~~e~----~p~~~Rg~~~~~~~~~~~~ 162 (502)
T TIGR00887 88 VYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAI-ITSEF----ATKKWRGAMMAAVFAMQGF 162 (502)
T ss_pred HHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHh----cChhhHHHHHHHHHHHHHH
Confidence 99999998888765 666655 789999999999999988776543 55665 3444556666666555555
Q ss_pred HHHHHHHHHHHHhcc--------------------cccCCcchhHHHHHHHHHHHHHHHHhccccCCC------CCcch-
Q 013096 194 ALIGGQVLANWLVGI--------------------DVKKGVVPSSTASVFLSILGIICVSRGWTENPK------MAFDD- 246 (449)
Q Consensus 194 ~~i~a~~lg~~l~~~--------------------~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~------~~~~~- 246 (449)
+.++++.++.++... ..+|+||++|.+..+..++..+. .+..||+++ +++++
T Consensus 163 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l~~~~~~~~~a 241 (502)
T TIGR00887 163 GILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYTADVAKDVEQA 241 (502)
T ss_pred HHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHhCcchHHH
Confidence 566666665544220 00358999998877766655443 345688753 11000
Q ss_pred -----------------h----------hhhhhHhhhcC---hhHHHHHH---HHHHHHHHHHHHHHHhhhhhccC-CC-
Q 013096 247 -----------------Y----------RTSFFTYIFGD---KRIWLLVL---AQACLQFSIALFWILWAPTLVAD-GR- 291 (449)
Q Consensus 247 -----------------~----------~~~~~~~l~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~-~~- 291 (449)
. .+..+++++++ ++.+...+ ...+.....++....|.|.+.++ +.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~ 321 (502)
T TIGR00887 242 ASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYS 321 (502)
T ss_pred HHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCC
Confidence 0 00135555542 22211111 11111111222334567777643 21
Q ss_pred ccchH-----------H-HHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc-c-hhHHHHHHH
Q 013096 292 EVHLG-----------L-IFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY-Q-EIGILVALF 357 (449)
Q Consensus 292 ~~~~g-----------~-i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~ 357 (449)
....+ . ......++.++|..+.+++.| |+++|+.+..+..+.++++.+..... + +.......+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~d---r~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 398 (502)
T TIGR00887 322 PPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVD---IIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIY 398 (502)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 11100 0 111223455678888999999 78888776665554444433222211 0 111111111
Q ss_pred HHHHHH-hhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhh----------cchh-HHHHHHHHH
Q 013096 358 CLFHAC-VGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRN----------IENA-AMVAFAALG 424 (449)
Q Consensus 358 ~l~~~~-~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~----------~~~~-~~~~~~~~~ 424 (449)
+...+. .....+....+..|.+|++.|+++.|+.+....++...++.. +.+.+. .+.. ...+++++.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 478 (502)
T TIGR00887 399 VLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFM 478 (502)
T ss_pred HHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHH
Confidence 111111 112345566677899999999999999887777665444433 333331 2222 233444444
Q ss_pred HHHHHHHHHHHHHhhcCCCccccC
Q 013096 425 LFIAAGCMHVLKRWGKQPYQNWHK 448 (449)
Q Consensus 425 ~l~~~~~~~~~~~~~~~~~~~~~~ 448 (449)
++.+ +...++++++.++.+|.++
T Consensus 479 ~~~~-i~~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 479 FLGI-LFTLLIPETKGKSLEELSG 501 (502)
T ss_pred HHHH-HHheEeccCCCCCHHhhhC
Confidence 4333 3344567777777777764
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.93 E-value=6.5e-23 Score=208.19 Aligned_cols=331 Identities=10% Similarity=-0.007 Sum_probs=196.9
Q ss_pred HHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh----cchhHHHHHHHHHHhH
Q 013096 80 ELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI----TAHPSVWVANICLSLA 154 (449)
Q Consensus 80 l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~----~s~~~l~~~R~l~Glg 154 (449)
..+++|+|++|.+++.+...++..++.++.|+++||+|||+++..+.++.+++++ +... ++++.+.+.|++.|++
T Consensus 52 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~ 131 (438)
T TIGR00712 52 YLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWF 131 (438)
T ss_pred HHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHH
Confidence 3445799999999999999999999999999999999999999998888887765 3332 4678889999999999
Q ss_pred HHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHh
Q 013096 155 SSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSR 234 (449)
Q Consensus 155 ~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~ 234 (449)
.+...+.... .+.|. +++++.++.++.......++..+++.+.+...+.. .+||..|++..+..++..+....
T Consensus 132 ~g~~~~~~~~-~i~~~----~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~--~~w~~~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 132 QGMGWPPCGR-TMVHW----WSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF--NDWHAALYFPAICAIIVALFAFA 204 (438)
T ss_pred hhcchHHHHH-HHHHh----cCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHH
Confidence 8876665443 23332 44445666777666665566666666555443321 38999998866554443333333
Q ss_pred ccccCCCC----C----cc--------hhh-----hhh-hHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C
Q 013096 235 GWTENPKM----A----FD--------DYR-----TSF-FTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G 290 (449)
Q Consensus 235 ~~~e~~~~----~----~~--------~~~-----~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~ 290 (449)
..||++++ + ++ +.+ ++. .+.+++|++++...+...+.+...+. ...|.|.++++ +
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g 283 (438)
T TIGR00712 205 MMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYG-VLDWSPTYLKEVKH 283 (438)
T ss_pred hccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHH-HHHhHHHHHHHccC
Confidence 34443211 0 00 000 111 23467888887765554444433333 34578888764 2
Q ss_pred -CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCch-hHHHHH-HHHHH-HHHHHHhcc-cchhHHHHHHHHHHHHHhh
Q 013096 291 -REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE-DCLLYA-FVVLG-FVFSIIAYD-YQEIGILVALFCLFHACVG 365 (449)
Q Consensus 291 -~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~-~~l~~~-~~~~~-~~l~~~~~~-~~~~~~~~~~~~l~~~~~g 365 (449)
+....++......++.++|..+.+++.| |++++ +..... ..... +........ ..+.+.....++..+++..
T Consensus 284 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~d---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 360 (438)
T TIGR00712 284 FALDKSSWAYFLYEYAGIPGTLLCGWMSD---KVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIY 360 (438)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHH---HhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHc
Confidence 3445677777777788899999999999 55322 222211 11111 111111111 1122222222222222211
Q ss_pred hhhhHHHHHHhccCCCcchhHHHHhhHHHHHHH-HHHHHH-HhHHhhhcchhHHHHHH
Q 013096 366 LILPSLARLRTMYVPNELRGGMISLSLAPANAA-ILLFLL-LRGFYRNIENAAMVAFA 421 (449)
Q Consensus 366 ~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~-~~~~~~-~g~~~~~~~~~~~~~~~ 421 (449)
...+.......|..|++.||+++|+.+...+.+ ...++. .|.+.+..+++..+.+.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~ 418 (438)
T TIGR00712 361 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVM 418 (438)
T ss_pred cHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHH
Confidence 111222345678899999999999988766654 333433 34555666665554433
No 60
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.93 E-value=2.6e-23 Score=212.70 Aligned_cols=318 Identities=11% Similarity=-0.020 Sum_probs=204.7
Q ss_pred HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH--HhcchhHHHHHHHHHHhHHHHhh
Q 013096 83 YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK--SITAHPSVWVANICLSLASSIFS 159 (449)
Q Consensus 83 ~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~--~~~s~~~l~~~R~l~Glg~~~~~ 159 (449)
|+++++.+.|.+.+.+++++.+++++.|+++||+|||+++..+.++.+++++ +. ..++++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 7899999999999999999999999999999999999999999988887765 33 33678899999999999999888
Q ss_pred hhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccC
Q 013096 160 FNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTEN 239 (449)
Q Consensus 160 ~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~ 239 (449)
+....+ ++| -+++++.++..+....+..++.+++|.+++++.+.+ .+||++|.+..+..++..+..+...+|+
T Consensus 150 ~~~~~~-~~~----~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~--~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 150 PATHKI-IVK----WAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW--GGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred hhHHHH-HHh----cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 776543 333 345566778888877777788888999988887641 2899999986665444433333333443
Q ss_pred CCC---C-cch---------h------hhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHH
Q 013096 240 PKM---A-FDD---------Y------RTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGL 297 (449)
Q Consensus 240 ~~~---~-~~~---------~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~ 297 (449)
+++ + +++ . .+.++++++++++++...+...+.+...+. ...|.|.++++ + +..+.|+
T Consensus 223 p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~l~~~~g~s~~~~g~ 301 (465)
T TIGR00894 223 PSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTI-LPTYLPTFISWVLRVSGKENGL 301 (465)
T ss_pred cccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcChHHhHH
Confidence 321 1 000 0 012477888999888777665555554443 35689988764 2 3445677
Q ss_pred HHHHHHHHHHHhhhHHHHHhcCCC--CCCchhH---HHHHHH--HHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhH
Q 013096 298 IFPSLLGARMLGSTVFPWLISGPS--SFRTEDC---LLYAFV--VLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPS 370 (449)
Q Consensus 298 i~~~~~~~~~lg~~l~~~l~~~~~--~~~~~~~---l~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~ 370 (449)
..+...++.+++..+.+++.||.. +...++. +..... +.++.+........+....+..+++.+++.+...+.
T Consensus 302 ~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 381 (465)
T TIGR00894 302 LSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAG 381 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhh
Confidence 766667777888888888888321 1111111 111111 111111111221122222333344444445545555
Q ss_pred HHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHH-HhHHh
Q 013096 371 LARLRTMYVPNELRGGMISLSLAPANAAILLFLL-LRGFY 409 (449)
Q Consensus 371 ~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~-~g~~~ 409 (449)
......+..|+ .+|++.++.+...+++....+. .|.+.
T Consensus 382 ~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~ 420 (465)
T TIGR00894 382 VLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNIL 420 (465)
T ss_pred hhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 55555666664 7899999988888876544443 34443
No 61
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.93 E-value=1.1e-22 Score=200.78 Aligned_cols=325 Identities=8% Similarity=-0.014 Sum_probs=209.0
Q ss_pred hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q 013096 72 LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVWKSITAHPSVWVANICL 151 (449)
Q Consensus 72 ~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~~~~~s~~~l~~~R~l~ 151 (449)
..+|++|.+.+++|.|+++.+++.+...++..+++++.|+++||+||||+++.+.+...++.+...+++.+.+++.|+++
T Consensus 18 ~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 97 (355)
T TIGR00896 18 SVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIRSAPGTALLFAGTALI 97 (355)
T ss_pred cCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 35788889999999999999999999999999999999999999999999999888877766533678999999999999
Q ss_pred HhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHH
Q 013096 152 SLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIIC 231 (449)
Q Consensus 152 Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~ 231 (449)
|++.+...+...+ .+.|. ++ ++.++..+.......++..+++.+++.+.+.. +.+||..|.......++....
T Consensus 98 g~g~~~~~~~~~~-~~~~~----~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~-~~~w~~~f~~~~~~~~~~~~~ 170 (355)
T TIGR00896 98 GVGIAIINVLLPS-LIKRD----FP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHS-GGHWQQALAWWALPALLALLA 170 (355)
T ss_pred HHHHHHHhccchH-HHHHh----Cc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHH
Confidence 9999876554433 22222 22 24566677666666666777777777776543 234888887654433332221
Q ss_pred HHhccccCCCC--CcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHHHHHHHH
Q 013096 232 VSRGWTENPKM--AFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPSLLGARM 307 (449)
Q Consensus 232 i~~~~~e~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~ 307 (449)
..||.+++ ++++..+...++++|||+.+...+...+.... +.....|.|.+.++ + +....+...+...++.+
T Consensus 171 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i 246 (355)
T TIGR00896 171 ---WIPQVRRRVAANQTTTRLTPVRIWRSPLAWQVTVFFGLQSGL-YYSLIGWLPAILISHGASAATAGSLLALMQLAQA 246 (355)
T ss_pred ---HhhhhccccCCCCCCCCCCCchhhcCHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 12332221 11111112356678888877655443333333 22334578887764 2 34456777788888999
Q ss_pred HhhhHHHHHhcCCCCCCc-hhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCC-Ccchh
Q 013096 308 LGSTVFPWLISGPSSFRT-EDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVP-NELRG 385 (449)
Q Consensus 308 lg~~l~~~l~~~~~~~~~-~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p-~~~rg 385 (449)
++..+.+++.| |++. ++.+..+..+.+++.....+..++. ... ...+++++.|..+|...+...+..+ +++++
T Consensus 247 ~~~~~~g~l~d---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g 321 (355)
T TIGR00896 247 ASALLIPALAR---RVKDQRGIVAVLAVLQLVGLCGLLFAPMHG-LWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAA 321 (355)
T ss_pred HHHHhHHHHHh---hhccchHHHHHHHHHHHHHHHHHHHhhhhH-HHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHH
Confidence 99999999999 6643 4444444434433333333322221 111 3345678888888887666655444 45678
Q ss_pred HHHHhhHHHHHHHHHHHHH-HhHHhhhc
Q 013096 386 GMISLSLAPANAAILLFLL-LRGFYRNI 412 (449)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 412 (449)
+..++.+...+++...++. .|.+.+..
T Consensus 322 ~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 322 ALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888877666655433443 34444443
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.93 E-value=1.4e-22 Score=198.15 Aligned_cols=321 Identities=17% Similarity=0.140 Sum_probs=228.9
Q ss_pred HHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchh
Q 013096 64 SLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHP 142 (449)
Q Consensus 64 ~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~ 142 (449)
+.....+....+..+.+.+++|.++.+.+.+.+...++..+++++.|+++||+||||.+..+..+..++.+ +...++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 88 (352)
T cd06174 9 FLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLW 88 (352)
T ss_pred HHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHH
Confidence 34445555667778788889999999999999999999999999999999999999999999988888776 66778999
Q ss_pred HHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHH
Q 013096 143 SVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASV 222 (449)
Q Consensus 143 ~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~ 222 (449)
.+++.|+++|++.+...+..++ ++.|.. ++|+.++.++.......++..++|.+++.+.+.. +|+..|.+..
T Consensus 89 ~~~~~~~l~g~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~ 160 (352)
T cd06174 89 LLLVGRFLLGLGGGALYPAAAA-LIAEWF----PPKERGRALGLFSAGFGLGALLGPLLGGLLAESL---GWRWLFLILA 160 (352)
T ss_pred HHHHHHHHHHcccccccHhHHH-HHHHhC----CccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHH
Confidence 9999999999999887777655 344442 3344566677766677777888888888887765 7888988876
Q ss_pred HHHHHHHHHHHhccccCCCCCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHH
Q 013096 223 FLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIF 299 (449)
Q Consensus 223 ~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~ 299 (449)
...++..+...+ .+ |+++...+...+.......+ ..+.|.+.++ + ++.+.+...
T Consensus 161 ~~~~~~~~~~~~-~~---------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 217 (352)
T cd06174 161 ILGLLLALLLLF-LL---------------------RLLLLLALAFFLLSFGYYGL-LTYLPLYLQEVLGLSAAEAGLLL 217 (352)
T ss_pred HHHHHHHHHHHH-HH---------------------HHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhcCCCHHHHHHHH
Confidence 665555443322 11 33444433333333332222 3356666554 2 445577777
Q ss_pred HHHHHHHHHhhhHHHHHhcCCCCCCchh-HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhcc
Q 013096 300 PSLLGARMLGSTVFPWLISGPSSFRTED-CLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMY 378 (449)
Q Consensus 300 ~~~~~~~~lg~~l~~~l~~~~~~~~~~~-~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~ 378 (449)
....++..++..+.+++.| |+++++ .+..+..+..++.......+ +.+......++.+++.+...+...++.+|.
T Consensus 218 ~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 293 (352)
T cd06174 218 SLFGLGGILGALLGGLLSD---RLGRRRLLLLIGLLLAALGLLLLALAP-SLALLLVALLLLGFGLGFAFPALLTLASEL 293 (352)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhccchhHHHHHHhh
Confidence 8888888999999999999 677777 66666555555444443333 233445556677888888889999999999
Q ss_pred CCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHH
Q 013096 379 VPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVA 419 (449)
Q Consensus 379 ~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~ 419 (449)
.|+|+|++.+|+.+...+.+...++.. +...++.+....+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~ 335 (352)
T cd06174 294 APPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFL 335 (352)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHH
Confidence 999999999999988888775555444 44445555444333
No 63
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.93 E-value=5.2e-23 Score=203.40 Aligned_cols=321 Identities=13% Similarity=0.037 Sum_probs=193.7
Q ss_pred HHHHHhhhhhHHHHH-HHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhc-ch
Q 013096 65 LASVMEGLWSVFGEY-ELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSIT-AH 141 (449)
Q Consensus 65 l~~~~~~~~~~~~~~-l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~-s~ 141 (449)
+.........|+.|. +.+++|+|+.+++++.+...++..+++++.|+++||+||||+++++.++..++.+ +.+++ ++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~ 91 (366)
T TIGR00886 12 LSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSY 91 (366)
T ss_pred HHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 333333456788775 6689999999999999999999999999999999999999999999999888776 77788 99
Q ss_pred hHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhc----cc---ccCCc
Q 013096 142 PSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVG----ID---VKKGV 214 (449)
Q Consensus 142 ~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~----~~---~~~g~ 214 (449)
+.+++.|+++|++.+.. +...+ ++.|. .++++.++..+.......++..+++.+++.+.. .. ...+|
T Consensus 92 ~~~~~~~~~~g~~~~~~-~~~~~-~~~~~----~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w 165 (366)
T TIGR00886 92 SVLLLLRLFIGIAGGSF-ASCMP-WISFF----FPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAW 165 (366)
T ss_pred HHHHHHHHHHHHhchhh-HhHHH-HHHHh----cCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 99999999999986643 33332 34443 333444555555443333333333333333222 10 01378
Q ss_pred chhHHH-HHHHHHHHHHHHHhccccCCCCC--cchhh-h-----------hhhHhhhcChhHHHHHHHHHHHHHHHHHHH
Q 013096 215 VPSSTA-SVFLSILGIICVSRGWTENPKMA--FDDYR-T-----------SFFTYIFGDKRIWLLVLAQACLQFSIALFW 279 (449)
Q Consensus 215 ~~~f~~-~~~~~~~~~~~i~~~~~e~~~~~--~~~~~-~-----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 279 (449)
|+.|++ ......+..++.....+|+++++ +++.+ + +..++.+++|+++...+...+.....+. .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 244 (366)
T TIGR00886 166 GWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLG-V 244 (366)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHH-H
Confidence 888843 22222222222222334433211 11000 0 1456678888877655544333332222 3
Q ss_pred HHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHh--cccc-hhHHH
Q 013096 280 ILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA--YDYQ-EIGIL 353 (449)
Q Consensus 280 ~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~--~~~~-~~~~~ 353 (449)
..|.|.+.++ + ++.+.+.......+..+++..+.+++.| |+++++.+.........+..... ...+ +....
T Consensus 245 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (366)
T TIGR00886 245 SSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISD---RLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVF 321 (366)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHH---hhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHH
Confidence 4567777654 2 3445676666677778889999999999 67776655544333333222222 2211 23233
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHH
Q 013096 354 VALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPAN 396 (449)
Q Consensus 354 ~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~ 396 (449)
+....+..+..|+..+...+...+..| +++|+++|+.+...+
T Consensus 322 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ 363 (366)
T TIGR00886 322 IVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGN 363 (366)
T ss_pred HHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhcc
Confidence 333344455566666666677777777 679999988766544
No 64
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.9e-23 Score=200.15 Aligned_cols=359 Identities=12% Similarity=0.037 Sum_probs=232.7
Q ss_pred CCcchhhhHHHHHHHHHHHHHhhhh----hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHH
Q 013096 49 SSSFVPFQRNFLLLFSLASVMEGLW----SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLI 124 (449)
Q Consensus 49 ~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~ 124 (449)
++..+++|.+.+...+++.++..+. +...|++.+|.++|.+|+|.+.+..++++.++-.+.|.++||.+.|+.+-.
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 4567788888877777777776543 334578888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHH-
Q 013096 125 FFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLA- 202 (449)
Q Consensus 125 ~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg- 202 (449)
++++.++.++ ..++++++.+.+.-+++|...|.-+|..... ++.. +++++.++..+.++..-.++..+.|++.
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~-i~~W----fsr~eRG~~~siWn~shNiGGal~~~~~~ 174 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCART-ITHW----FSRKERGTWWSIWNTSHNIGGALAPLVAL 174 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHH-HHHH----cCccccCceEEEehhhhhcccchHHHHHH
Confidence 9999998887 7888999999999999999888777765432 2222 2333344444554444344333444444
Q ss_pred -HHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccCCCC---C---c------c--h--hhh-------hhhHhhhcC
Q 013096 203 -NWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM---A---F------D--D--YRT-------SFFTYIFGD 258 (449)
Q Consensus 203 -~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~---~---~------~--~--~~~-------~~~~~l~~~ 258 (449)
+++..++ +||..|++..++.++..++.++..+++|++ + + + + ++. .-++.+++|
T Consensus 175 la~~~~~~---~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~N 251 (448)
T COG2271 175 LAFFAFHG---GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKN 251 (448)
T ss_pred HHHHHhcc---chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcC
Confidence 5555544 899999987666555444455555555432 0 0 0 0 111 125678999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhccCC---CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchh-HHHHHH-
Q 013096 259 KRIWLLVLAQACLQFSIALFWILWAPTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED-CLLYAF- 333 (449)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~-~l~~~~- 333 (449)
|.+|.+++...+.+..=+. +..|.|.++.+. +....+..++.+-.+.+.|++++|+++|| -++.+| ...+.+
T Consensus 252 k~iW~la~a~vfvYivR~g-i~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDk--lfkgrR~p~~~i~~ 328 (448)
T COG2271 252 KLIWLLALANVFVYVVRYG-INDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDK--LFKGRRGPMALIFM 328 (448)
T ss_pred hHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH--hcccccchHHHHHH
Confidence 9999988877666544333 467999998753 33456677777888999999999999995 343333 322222
Q ss_pred HHHHHHHHHHhcccch-hHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHH-HH-HHHHHHhHHhh
Q 013096 334 VVLGFVFSIIAYDYQE-IGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA-AI-LLFLLLRGFYR 410 (449)
Q Consensus 334 ~~~~~~l~~~~~~~~~-~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~-~~-~~~~~~g~~~~ 410 (449)
+...+++......++. ..+....+.+.++..-...-.......|..|++.-|++.|+.....++ +. ......|...|
T Consensus 329 ~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d 408 (448)
T COG2271 329 LLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408 (448)
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe
Confidence 2222222222222222 233333333344433222233445567999999999999998888887 32 22222344445
Q ss_pred hcchhHHH
Q 013096 411 NIENAAMV 418 (449)
Q Consensus 411 ~~~~~~~~ 418 (449)
+.+....+
T Consensus 409 ~~gW~g~F 416 (448)
T COG2271 409 TWGWDGGF 416 (448)
T ss_pred cCCCcchH
Confidence 54544333
No 65
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.93 E-value=1.9e-23 Score=206.70 Aligned_cols=332 Identities=12% Similarity=0.031 Sum_probs=205.8
Q ss_pred hhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHH
Q 013096 71 GLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANI 149 (449)
Q Consensus 71 ~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~ 149 (449)
...++..|.+.+++|.|+.+++++.+...++..+++++.|+++||+|||++++.+.++..++.+ +..+++++.+++.|+
T Consensus 12 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (379)
T TIGR00881 12 KNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWA 91 (379)
T ss_pred HhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3445566777789999999999999999999999999999999999999999999988888776 778899999999999
Q ss_pred HHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHH-HHHHHHhcccccCCcchhHHHHHHHHHHH
Q 013096 150 CLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQ-VLANWLVGIDVKKGVVPSSTASVFLSILG 228 (449)
Q Consensus 150 l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~-~lg~~l~~~~~~~g~~~~f~~~~~~~~~~ 228 (449)
++|++.+...+...+ ++.|. .++++.++.++.......++.+++| .++..+.+. .+||+.|.+...+.++.
T Consensus 92 ~~g~~~~~~~~~~~~-~~~~~----~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 163 (379)
T TIGR00881 92 LNGIFQGMGWPPCGR-TVTKW----FSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL---YSWHWVFIVPGIIAIIV 163 (379)
T ss_pred HHHhhccccCCchHH-HHHHh----cCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc---CCchhHHHHHHHHHHHH
Confidence 999999877776554 33443 2333444455555555556666666 455555544 38898988765544443
Q ss_pred HHHHHhccccCCCC------C----cc------------hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 013096 229 IICVSRGWTENPKM------A----FD------------DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTL 286 (449)
Q Consensus 229 ~~~i~~~~~e~~~~------~----~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 286 (449)
.+......+|++++ + ++ +..+...++++++|.++...+...+....... ...|.|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (379)
T TIGR00881 164 SLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTG-ILDWSPLY 242 (379)
T ss_pred HHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 33333333443211 0 00 00112345677888877665544444333232 34467777
Q ss_pred ccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhH-HHHHH-HHHHHHHHHHhcc-cchhHHHHHHHHHH
Q 013096 287 VAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDC-LLYAF-VVLGFVFSIIAYD-YQEIGILVALFCLF 360 (449)
Q Consensus 287 ~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~-l~~~~-~~~~~~l~~~~~~-~~~~~~~~~~~~l~ 360 (449)
..+ + ++.+.+.......++.++|..+.+++.||. .++++. +.... ....+++...... ..+...........
T Consensus 243 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (379)
T TIGR00881 243 LTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKL--FNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFAL 320 (379)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHH--cCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH
Confidence 653 2 344567777777788889999999999831 222222 21111 1111112211111 11222222222333
Q ss_pred HHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHH-HhHHhhhcc
Q 013096 361 HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLL-LRGFYRNIE 413 (449)
Q Consensus 361 ~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 413 (449)
+...+...+......+|..|++.||++.|+.+...+++...++. .|.+.+..+
T Consensus 321 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 321 GFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred HHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 33333334455667789999999999999988877776544443 344445444
No 66
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.93 E-value=1.7e-21 Score=200.34 Aligned_cols=358 Identities=13% Similarity=0.072 Sum_probs=221.8
Q ss_pred HHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh-----CchHH-HHHHHHHHHHHHH-HHHh
Q 013096 66 ASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI-----GQKKV-CLIFFILHLFVGV-WKSI 138 (449)
Q Consensus 66 ~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~-----GRr~~-ll~~~~~~~~~~l-~~~~ 138 (449)
......+..+.++...++.|.|.++++.....+. .. ++.+++|+++||+ ||||. ++.+.+..+++.. +++.
T Consensus 24 ~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~-~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~ 101 (491)
T PRK11010 24 SGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQ-AY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFL 101 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 4444556677778888899999999997633332 22 5789999999999 99997 4455555555543 4443
Q ss_pred ---cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcc
Q 013096 139 ---TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVV 215 (449)
Q Consensus 139 ---~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~ 215 (449)
++++.+.+.|+++|++.+...+..++ +..|. .++++.++..+....+..++.++++.++.++.+.. +|||
T Consensus 102 ~~~~~l~~l~~~~~l~~~~~a~~~i~~~a-~~~~~----~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~--~GWr 174 (491)
T PRK11010 102 EPGTQLRWLAALAVVIAFCSASQDIVFDA-WKTDV----LPAEERGAGAAISVLGYRLAMLVSGGLALWLADRY--LGWQ 174 (491)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh----cChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCHH
Confidence 47889999999999988876666554 33333 34455677777777777778888888888887632 4899
Q ss_pred hhHHHHHHHHHHHHHHHHhccccCCCC-Cc-ch---hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-
Q 013096 216 PSSTASVFLSILGIICVSRGWTENPKM-AF-DD---YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD- 289 (449)
Q Consensus 216 ~~f~~~~~~~~~~~~~i~~~~~e~~~~-~~-~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~- 289 (449)
.+|++.+...++..+... ..||++++ ++ ++ ...+++++++++++.+.......+.... ..+...|.|.++.+
T Consensus 175 ~~f~i~a~l~ll~~l~~~-~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~-~~~~~~~~~~~l~~~ 252 (491)
T PRK11010 175 GMYWLMAALLIPCIIATL-LAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLG-DAFAMSLTTTFLIRG 252 (491)
T ss_pred HHHHHHHHHHHHHHHHHH-hcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 999987665555543333 35665422 11 11 1123567778777666544333333222 22223455555432
Q ss_pred -C-CccchHHHHH-HHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHH---HHHHhcccchhHHHHHHHHHHHHH
Q 013096 290 -G-REVHLGLIFP-SLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV---FSIIAYDYQEIGILVALFCLFHAC 363 (449)
Q Consensus 290 -~-~~~~~g~i~~-~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~l~~~~ 363 (449)
+ +..+.|.... ...++.++|..+.+++.| |++++|.+.....+.++. ........++........++..++
T Consensus 253 ~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~d---r~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~ 329 (491)
T PRK11010 253 VGFDAGEVGLVNKTLGLLATIVGALYGGILMQ---RLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLC 329 (491)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 3 4455677664 334688899999999999 777777655433322221 111122222222223333444455
Q ss_pred hhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHH-HHHHHHhHHhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Q 013096 364 VGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI-LLFLLLRGFYRNIENAAMVAFAALGLFIAAGCMHVLKR 437 (449)
Q Consensus 364 ~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 437 (449)
.|+..++..++.++..|++.+++.+++.+...+++. ..+++.|.+.+..|++..+.+.++..+.+.......|+
T Consensus 330 ~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 330 GGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666667778888899999999999998887777663 34455566667677766555544444444444444443
No 67
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.93 E-value=2.9e-21 Score=193.91 Aligned_cols=348 Identities=12% Similarity=0.016 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh-----CchH-HHHHHHHHHHHH
Q 013096 59 FLLLFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI-----GQKK-VCLIFFILHLFV 132 (449)
Q Consensus 59 ~~~~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~-----GRr~-~ll~~~~~~~~~ 132 (449)
++.+|+.-....++..+.+|..+++.|+|.+|+|++...... .+.++++|+++||+ |||| .++.+.+..+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 344555555566677778888889999999999988666654 57799999999999 8876 577777776655
Q ss_pred HH-HHHh---cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Q 013096 133 GV-WKSI---TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGI 208 (449)
Q Consensus 133 ~l-~~~~---~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~ 208 (449)
.. +.+. ++++.+++..++.+...+...++.++ ++.|. .++++.++..+....+..++.++++.++.++.+.
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a-l~~~~----~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDA-YSTDV----LHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh----cChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 44 4444 35788888888888777776666665 44444 2344456666666666677777888888877764
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhccccCCCCC--cch---hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhh
Q 013096 209 DVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA--FDD---YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWA 283 (449)
Q Consensus 209 ~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~--~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (449)
. +|||.+|++.+...++..+. ....||+++++ +++ ..++++++++|||.++.+.+...+.............
T Consensus 157 ~--~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 233 (402)
T PRK11902 157 V--LGWGNTYLLMAGLMLAGALT-TLWAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLST 233 (402)
T ss_pred c--cCHHHHHHHHHHHHHHHHHH-HHhcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHH
Confidence 2 48999999866554444332 33456654321 111 2234678899999887655544443332221111223
Q ss_pred hhhccC-C-CccchHHHHHHHH-HHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHH---HHHHhcccchhHHHHHHH
Q 013096 284 PTLVAD-G-REVHLGLIFPSLL-GARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV---FSIIAYDYQEIGILVALF 357 (449)
Q Consensus 284 p~~~~~-~-~~~~~g~i~~~~~-~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~---l~~~~~~~~~~~~~~~~~ 357 (449)
|.+.++ + ++...|.+....+ .+.++|..+.+++.| |+++++.+.....+..+. +......+++.+......
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~---r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 310 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMV---RLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAI 310 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 433322 3 3445677665443 457889999999999 787777655443332222 112223222333333332
Q ss_pred HH----HHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHH-HHHHHHhHHhhhcchhHHHHHHHH
Q 013096 358 CL----FHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI-LLFLLLRGFYRNIENAAMVAFAAL 423 (449)
Q Consensus 358 ~l----~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~ 423 (449)
.+ .++..+...+..+.+.++..|.++++...+ ..+++. ..+++.|.+.+..|.+..+..+++
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~ 377 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSATQYALLSA----LASVGRVYVGPTSGYLVEAYGWPGFYLMTVV 377 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 22 233344445566666666666555543222 222221 223333555677776655544433
No 68
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.93 E-value=3.1e-22 Score=204.06 Aligned_cols=354 Identities=11% Similarity=-0.008 Sum_probs=220.2
Q ss_pred hhHHHHHHHHHHHHHhhh----hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHH
Q 013096 55 FQRNFLLLFSLASVMEGL----WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHL 130 (449)
Q Consensus 55 ~~~~~~~~~~l~~~~~~~----~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~ 130 (449)
+++..+...++.....+. .+++.+++.+++|.|+++.+++.+..++...+++++.|+++||+|||++++.+.++..
T Consensus 16 ~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 95 (455)
T TIGR00892 16 WGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLAS 95 (455)
T ss_pred cchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHH
Confidence 344444444444433222 2455677788999999999999988888888999999999999999999999988888
Q ss_pred HHHH-HHHhcchhHHHH-HHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Q 013096 131 FVGV-WKSITAHPSVWV-ANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGI 208 (449)
Q Consensus 131 ~~~l-~~~~~s~~~l~~-~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~ 208 (449)
++++ ++++++++.+++ .|+++|++.+...+...+ ++.+.. + ++.+++.+....+..++..++|.+++++.+.
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~-~~~~~~----~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~ 169 (455)
T TIGR00892 96 LGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLT-MLGKYF----Y-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES 169 (455)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHH-HHHHHH----H-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 8776 778889998865 579999998865443322 333332 2 2345677776667677777888888888775
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhccc--cCC---CCC--c--------ch----hhh---hhh--HhhhcChhHHHH
Q 013096 209 DVKKGVVPSSTASVFLSILGIICVSRGWT--ENP---KMA--F--------DD----YRT---SFF--TYIFGDKRIWLL 264 (449)
Q Consensus 209 ~~~~g~~~~f~~~~~~~~~~~~~i~~~~~--e~~---~~~--~--------~~----~~~---~~~--~~l~~~~~~~~~ 264 (449)
+ |||+.|.+..++.+++.+...+..+ +++ +++ + ++ ... ..+ .+++++|+++.+
T Consensus 170 ~---gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (455)
T TIGR00892 170 F---GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVY 246 (455)
T ss_pred h---ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHH
Confidence 5 8999999866554433322222111 110 000 0 00 000 011 146778887765
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHH--HHHHHHHHH
Q 013096 265 VLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLY--AFVVLGFVF 340 (449)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~--~~~~~~~~l 340 (449)
.....+.....+. ...|.|.+.++ + +..+.+...+...++.+++..+.+++.||. +.++++.... +....++.+
T Consensus 247 ~~~~~l~~~~~~~-~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~l~~ 324 (455)
T TIGR00892 247 LSGNVIMFLGFFA-PIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK-WIRPHVQYLFSFALLFNGLTH 324 (455)
T ss_pred HHHHHHHHHHccc-hHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccCHHHHHHHHHHHHHHHHHH
Confidence 5544433333222 23456666544 2 344567777777788888888899999841 2333332222 222223332
Q ss_pred HHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcc-hhHHH
Q 013096 341 SIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIE-NAAMV 418 (449)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~-~~~~~ 418 (449)
....... +.+..+...++.+++.+...+...+...+.+|++++|+.+|+.+...+++...++.. |.+.+..+ +...+
T Consensus 325 ll~~~~~-~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f 403 (455)
T TIGR00892 325 LLCALAG-DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIF 403 (455)
T ss_pred HHHHHhc-hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHH
Confidence 2222222 333334445566777788888888888999999999999999988888875555554 43444443 44433
Q ss_pred HH
Q 013096 419 AF 420 (449)
Q Consensus 419 ~~ 420 (449)
.+
T Consensus 404 ~~ 405 (455)
T TIGR00892 404 YA 405 (455)
T ss_pred HH
Confidence 33
No 69
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.92 E-value=2.5e-22 Score=226.94 Aligned_cols=334 Identities=14% Similarity=0.080 Sum_probs=217.3
Q ss_pred HHHHHHHHHHHhhhhhHHHH-----HHHHHhCCCh-HHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHH---HHHHH
Q 013096 59 FLLLFSLASVMEGLWSVFGE-----YELVYYGVAK-EQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLI---FFILH 129 (449)
Q Consensus 59 ~~~~~~l~~~~~~~~~~~~~-----~l~~~~g~s~-~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~---~~~~~ 129 (449)
++...+++.++|++....+. .+..+.+.+. ..+++..+++++++.++++++|+++||+|||+++.. ..+..
T Consensus 16 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~ 95 (1140)
T PRK06814 16 LFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGI 95 (1140)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHH
Confidence 34556677787776432211 1112333332 346677788889999999999999999999998643 22222
Q ss_pred HHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Q 013096 130 LFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGI 208 (449)
Q Consensus 130 ~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~ 208 (449)
.+..+ +...+|++++++.|+++|++.+...|+..+ ++.+. .++++++++++..+.+..++.++||.+++++...
T Consensus 96 ~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a-~l~~~----~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~ 170 (1140)
T PRK06814 96 AALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS-ILPDH----LNKDELLGANALVEAGTFIAILLGTIIGGLATIS 170 (1140)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH-hhHhh----cCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22222 444589999999999999999988887665 33443 3455677788888888888899999999999886
Q ss_pred cccCCcchhHHHHHHHHHHHHHHHHhccccCCCCCc--c---h---hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 013096 209 DVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF--D---D---YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWI 280 (449)
Q Consensus 209 ~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~--~---~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
. +|++.|.......+++++ +...++++++++. + + ...+.++.+.++|.++...+...++...... ..
T Consensus 171 ~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 245 (1140)
T PRK06814 171 G---NFVILVALLMGIAVLGWL-ASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAV-VL 245 (1140)
T ss_pred c---ccHHHHHHHHHHHHHHHH-HHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-HH
Confidence 5 888887544444444333 3334555432211 1 1 1124578888998888766655554443333 34
Q ss_pred HhhhhhccCC---CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcc-----------
Q 013096 281 LWAPTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYD----------- 346 (449)
Q Consensus 281 ~~~p~~~~~~---~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~----------- 346 (449)
.|.|.+..+. +....|++++...+++++|+.+.+++.+ +...++.+..+.++.+++.....+.
T Consensus 246 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (1140)
T PRK06814 246 SQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSE---GRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQL 322 (1140)
T ss_pred HHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhC---CceeeeeehHHHHHHHHHHHHHHhcccccccccccc
Confidence 4778887642 4456888888889999999999999987 3333343333222222222111110
Q ss_pred --------cchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH
Q 013096 347 --------YQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL 405 (449)
Q Consensus 347 --------~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~ 405 (449)
.++.+...+..++++++.++..+...++.++.+|++.||+++|..++..+++...+.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~ 389 (1140)
T PRK06814 323 KSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTII 389 (1140)
T ss_pred cchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHH
Confidence 12333344555566778888888889999999999999999999988777765444443
No 70
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=3.4e-22 Score=201.81 Aligned_cols=341 Identities=14% Similarity=0.075 Sum_probs=193.8
Q ss_pred HHHHHHHhhhhhHHHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-H-H--H
Q 013096 63 FSLASVMEGLWSVFGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-W-K--S 137 (449)
Q Consensus 63 ~~l~~~~~~~~~~~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~-~--~ 137 (449)
+++..+......|+.+...+ ++|+|+.++|.+.+...++..+++++.|+++||+||||+++++..+..+... . . .
T Consensus 19 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 98 (420)
T PRK09528 19 FFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVF 98 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334434456677765555 5999999999999999999999999999999999999999876655443321 1 1 1
Q ss_pred hc-----chhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 013096 138 IT-----AHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKK 212 (449)
Q Consensus 138 ~~-----s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~ 212 (449)
++ .+...++.++..|.+.....+..++|. ++. .|+ .+..++.......++..++|.+++++.+ .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~-----~g~~~g~~~~~~~~g~~i~~~~~g~l~~----~ 167 (420)
T PRK09528 99 APLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERV-SRR-----SGFEYGRARMWGSLGWALCAFIAGILFN----I 167 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHH-Hhh-----ccccchhhHHhhhHHHHHHHHHHHHHHh----c
Confidence 11 111122333444433333333334432 211 111 1223344344445566778888887764 2
Q ss_pred CcchhHHHHHHHHHHHHHHHHhccccCCCCC-----c-ch---hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhh
Q 013096 213 GVVPSSTASVFLSILGIICVSRGWTENPKMA-----F-DD---YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWA 283 (449)
Q Consensus 213 g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~-----~-~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (449)
+|+.+|++.....+++.+......+|.++++ + ++ ...+..++++|||+++.+.+...+... .+.....+.
T Consensus 168 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~-~~~~~~~~~ 246 (420)
T PRK09528 168 NPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVAC-FYDVFDQQF 246 (420)
T ss_pred CchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHH-HHHHHHHHH
Confidence 7788998876655554444433333322211 0 00 111235567888877654433222221 122222234
Q ss_pred hhhccC-----C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHH
Q 013096 284 PTLVAD-----G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALF 357 (449)
Q Consensus 284 p~~~~~-----~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 357 (449)
|.+..+ + +....|.+.+...++..++....+++.| |+++++.+..+..+.++......+.. +.+..+...
T Consensus 247 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~d---r~g~~~~~~~~~~l~~~~~~l~~~~~-~~~~~~~~~ 322 (420)
T PRK09528 247 PNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIIN---RIGAKNALLLAGTIMAVRIIGSGFAT-GPLEVSILK 322 (420)
T ss_pred HHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCcchhhHHHHHHHHHHHHHHHhcc-cHHHHHHHH
Confidence 444321 1 2234677777777778899999999999 78888877666555555444444433 333333333
Q ss_pred HHHHHHhhhhhhHHHHHHhccCCCcchhHHHHh-hHHHHHHHHHHH-HHHhHHhhhcchhHHHH
Q 013096 358 CLFHACVGLILPSLARLRTMYVPNELRGGMISL-SLAPANAAILLF-LLLRGFYRNIENAAMVA 419 (449)
Q Consensus 358 ~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~ 419 (449)
.+.+.+.+...+....+.++..|++.|++..+. .++..+++...+ ++.|.+.+..|+...+.
T Consensus 323 ~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~ 386 (420)
T PRK09528 323 LLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYL 386 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHH
Confidence 444555555556666778888999999887655 444455554333 33455556666544444
No 71
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.92 E-value=8.4e-22 Score=198.65 Aligned_cols=355 Identities=14% Similarity=0.084 Sum_probs=214.8
Q ss_pred HHHHHhhhhhHHHH-HHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCc-hHHHHHHHHHHHHHHH-HHHhcch
Q 013096 65 LASVMEGLWSVFGE-YELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQ-KKVCLIFFILHLFVGV-WKSITAH 141 (449)
Q Consensus 65 l~~~~~~~~~~~~~-~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GR-r~~ll~~~~~~~~~~l-~~~~~s~ 141 (449)
+.....++..|+++ .+.+++|+|.+|+|++.+...++..+++++.|.++||+|| |+++.++.++.++.+. +.+.+|+
T Consensus 13 ~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~ 92 (418)
T TIGR00889 13 LQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTP 92 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 33333445545444 4446799999999999999999999999999999999965 7777777777666554 6677899
Q ss_pred hHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhh------cCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcc
Q 013096 142 PSVWVANICLSLASSIFSFNFETWVAIEHEKQ------GQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVV 215 (449)
Q Consensus 142 ~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r------~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~ 215 (449)
+.+++.|++.|++.+...+..+++..+...++ ++++ .+.++ .++.+++|.+++.+... ..|
T Consensus 93 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~---~r~~G------~lG~~ig~~l~g~l~~~---~~~- 159 (418)
T TIGR00889 93 AGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPP---IRVMG------TIGFIAAMWAVSLLDIE---LSN- 159 (418)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCC---eeeeh------hHHHHHHHHHHHHhccc---chh-
Confidence 99999999999988777777666533222212 1222 23333 23455677777766321 134
Q ss_pred hhHHHHHHHHHHHHHHHHhccccCCCCC-cc--hhh---hhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 013096 216 PSSTASVFLSILGIICVSRGWTENPKMA-FD--DYR---TSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD 289 (449)
Q Consensus 216 ~~f~~~~~~~~~~~~~i~~~~~e~~~~~-~~--~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 289 (449)
.+|++..+..++..+.. ...||.++++ ++ +.. +..++.++|||+++.+.+...+...... ....+.|.+.++
T Consensus 160 ~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (418)
T TIGR00889 160 IQLYITAGSSALLGVFA-LTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQ-ITNIFGNGFLHE 237 (418)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHH-HHHHhHHHHHHH
Confidence 35666555444444333 3456654221 11 111 1134568889887665554444332221 112233444432
Q ss_pred -C-Cc--------cchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccc-h--hHHHHHH
Q 013096 290 -G-RE--------VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQ-E--IGILVAL 356 (449)
Q Consensus 290 -~-~~--------~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~--~~~~~~~ 356 (449)
+ ++ ...+...+...++.+++....+++.| |+++++.+..+.++.++.......... . .+..+..
T Consensus 238 ~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~d---r~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~ 314 (418)
T TIGR00889 238 FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLK---RFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLS 314 (418)
T ss_pred hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHH
Confidence 2 11 23467777777788888899999999 788888877776665554433333211 1 1223344
Q ss_pred HHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhH-HHHHHHHHHHHHH-hHHhhhc------chhHHHH-HHHHHHHH
Q 013096 357 FCLFHACVGLILPSLARLRTMYVPNELRGGMISLSL-APANAAILLFLLL-RGFYRNI------ENAAMVA-FAALGLFI 427 (449)
Q Consensus 357 ~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~-~~~~~~~~~~~~~-g~~~~~~------~~~~~~~-~~~~~~l~ 427 (449)
.++.+++.+...+....+..|.+|++.||++.|+.+ ...+++...++.. |.+.+.. ++...+. .+++.++.
T Consensus 315 ~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~ 394 (418)
T TIGR00889 315 MIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAIL 394 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Confidence 556667777777888888899999999999999987 4445555445544 4444443 2344333 33344444
Q ss_pred HHHHHHHHHH
Q 013096 428 AAGCMHVLKR 437 (449)
Q Consensus 428 ~~~~~~~~~~ 437 (449)
+...+...++
T Consensus 395 ~~l~~~~~~~ 404 (418)
T TIGR00889 395 AVLFMIFFKY 404 (418)
T ss_pred HHHHHHHhCC
Confidence 4334444443
No 72
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.92 E-value=2.6e-21 Score=194.50 Aligned_cols=335 Identities=10% Similarity=0.005 Sum_probs=209.5
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH---Hh
Q 013096 63 FSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK---SI 138 (449)
Q Consensus 63 ~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~---~~ 138 (449)
+++-.+.+++.+|+.|.+.+++|.|+.|.|++.+..+++..+++++.|++.||+||||+++.+.++++++++ .. ..
T Consensus 12 f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~ 91 (410)
T TIGR00885 12 FALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI 91 (410)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344445567788999999899999999999999999999999999999999999999999999999888765 22 24
Q ss_pred cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc---------
Q 013096 139 TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID--------- 209 (449)
Q Consensus 139 ~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~--------- 209 (449)
+|++.+++.|++.|+|.|...+..+.+ +.+.. ++++.++..+..+..+.++..++|.++..+....
T Consensus 92 ~~~~~~l~~~~l~G~g~g~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~ 166 (410)
T TIGR00885 92 MNYTLFLVGLFILTAGLGFLETAANPY-ILVMG----PESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL 166 (410)
T ss_pred ccHHHHHHHHHHHHhhHHHHHhhhhHH-HHHHC----CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh
Confidence 689999999999999999887766553 33332 2222334455555555666666777666553210
Q ss_pred --------------ccCCcchhHHHHHHHHHHHHHHH-HhccccCCCCC-cchhhhhhhHhhhcChhHHHHHHHHHHHHH
Q 013096 210 --------------VKKGVVPSSTASVFLSILGIICV-SRGWTENPKMA-FDDYRTSFFTYIFGDKRIWLLVLAQACLQF 273 (449)
Q Consensus 210 --------------~~~g~~~~f~~~~~~~~~~~~~i-~~~~~e~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 273 (449)
...+||.+|.+.+.+.++..++. ....||.++++ +++..++.+++++|+|+++...+..++..+
T Consensus 167 ~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg 246 (410)
T TIGR00885 167 DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAKQISFSASLSRLARIRHYREGVIAQFFYVG 246 (410)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccchhhHHHHHhChhHHHHHHHHHHHHH
Confidence 01268999987555444333222 22344422221 111122345678888888765554444332
Q ss_pred HHHHHHHHhhhhhccC-CCcc--c-hHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccch
Q 013096 274 SIALFWILWAPTLVAD-GREV--H-LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQE 349 (449)
Q Consensus 274 ~~~~~~~~~~p~~~~~-~~~~--~-~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 349 (449)
. ......+.|.+..+ +.+. . .+...+....+.++|..+.+++.| |++++|.+.....+..++..+.....+.
T Consensus 247 ~-e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~---r~~~~~~l~i~~~~~~~~~ll~~~~~~~ 322 (410)
T TIGR00885 247 V-QIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLIS---YLAAHKVLMAYAIIGMALCLGSIFAGGH 322 (410)
T ss_pred H-HHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 2 22223445666543 1111 1 222334445667889999999999 7888887665544444333333332221
Q ss_pred hHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHH-HHHHHHHhHHhh
Q 013096 350 IGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA-ILLFLLLRGFYR 410 (449)
Q Consensus 350 ~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~-~~~~~~~g~~~~ 410 (449)
.....+.+.+++.+..+|...++..+..+++.+....++... . ++ .+.+++.|...|
T Consensus 323 --~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~-~-~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 323 --VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA-I-IGGGIVPPLQGFIID 380 (410)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH-H-hccchHHHHHHHHHH
Confidence 224455566777777889999999999887754333333221 1 32 334455566666
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=6.7e-22 Score=223.71 Aligned_cols=334 Identities=16% Similarity=0.180 Sum_probs=214.2
Q ss_pred HHHHHHHhhh-hhHHHHHHHHHhCCCh--HHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH----H
Q 013096 63 FSLASVMEGL-WSVFGEYELVYYGVAK--EQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV----W 135 (449)
Q Consensus 63 ~~l~~~~~~~-~~~~~~~l~~~~g~s~--~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l----~ 135 (449)
.++..+++.. ...+.+.++.+++.+. ...+++.++.+++..++++++|+++||+|||++++++.++..+.++ +
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~ 97 (1146)
T PRK08633 18 QFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLA 97 (1146)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444432 2333344555666654 3467788888899999999999999999999999988776554332 3
Q ss_pred HHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-------
Q 013096 136 KSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGI------- 208 (449)
Q Consensus 136 ~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~------- 208 (449)
...++++.+++.|+++|++.+...++..+ ++.|. .+.++.+++++....+..++.++++.+++++.+.
T Consensus 98 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~i~~~----~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~ 172 (1146)
T PRK08633 98 YYLGWFWLAFAVTFLLGAQSAIYSPAKYG-IIPEL----VGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPS 172 (1146)
T ss_pred HHHccHHHHHHHHHHHHHHHHhhchHHHh-hhHHh----cCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 45578999999999999999988777654 44444 3444566677777777778888899999988764
Q ss_pred -cccCCcchhHHHHH-HHHHHHHHHHHhccccCCCCCc----c------hhhhhhhHhhhcChhHHHHHHHHHHHHHHHH
Q 013096 209 -DVKKGVVPSSTASV-FLSILGIICVSRGWTENPKMAF----D------DYRTSFFTYIFGDKRIWLLVLAQACLQFSIA 276 (449)
Q Consensus 209 -~~~~g~~~~f~~~~-~~~~~~~~~i~~~~~e~~~~~~----~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 276 (449)
+ .+|++.+.+.. ...++..+ .....||.+..+. + +.....++.++++|.++...+...+.....+
T Consensus 173 ~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (1146)
T PRK08633 173 EI--LGRIAPAGLVLLAVAVLGLI-FAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQ 249 (1146)
T ss_pred cc--ccchHHHHHHHHHHHHHHHH-HHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 2 12333333322 22222222 2234455443211 0 1112456778888887765544444433322
Q ss_pred HHHHHhhhhhccC--C-Ccc-chHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHH
Q 013096 277 LFWILWAPTLVAD--G-REV-HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGI 352 (449)
Q Consensus 277 ~~~~~~~p~~~~~--~-~~~-~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 352 (449)
. ...+.|.+..+ + +.. ..|+++....++.++|+.+.+++.| |.++++.+.++.++.++++....... +.+.
T Consensus 250 ~-~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~---r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 324 (1146)
T PRK08633 250 L-AQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSG---RHIELGLVPLGALGLALSLFLLPTAP-SLAS 324 (1146)
T ss_pred H-HHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhC---CceEccchhHHHHHHHHHHHHHHHhh-hHHH
Confidence 2 23456666543 2 334 5788888888889999999999998 56666655555444444444333332 3333
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHh
Q 013096 353 LVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFY 409 (449)
Q Consensus 353 ~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~ 409 (449)
.++.+++++++.++..+..+++.++..|++.||+++|+.++..+++...++..+.+.
T Consensus 325 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 325 VLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 445555667778888888888999999999999999998877776654444444433
No 74
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.92 E-value=6.7e-22 Score=195.08 Aligned_cols=314 Identities=13% Similarity=0.038 Sum_probs=202.6
Q ss_pred hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh-----CchHHH-HHHHHHHHHHHH-HHHh---cch
Q 013096 72 LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI-----GQKKVC-LIFFILHLFVGV-WKSI---TAH 141 (449)
Q Consensus 72 ~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~-----GRr~~l-l~~~~~~~~~~l-~~~~---~s~ 141 (449)
+.++..|.+.+|+|+|.+|++..... .+...+ ++++|+++||+ ||||.+ +.+.+..+++.. ..+. .++
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l 83 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDL 83 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence 44566778889999999999988655 444444 88999999998 999985 556666665543 4454 466
Q ss_pred hHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccc-----cCCcch
Q 013096 142 PSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDV-----KKGVVP 216 (449)
Q Consensus 142 ~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~-----~~g~~~ 216 (449)
+.+....++.+++.+...++.+++ +.|. .++++.+++.+....+..++.++++.+++++.+... .|+||.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~a~-~~~~----~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~ 158 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIALDAW-RLEI----LSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY 158 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHh----CCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH
Confidence 677777888888777766666653 4444 233445566666666667777888888887776551 133999
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCCCC--cch---hhhhhhHhhhcChh---HHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 013096 217 SSTASVFLSILGIICVSRGWTENPKMA--FDD---YRTSFFTYIFGDKR---IWLLVLAQACLQFSIALFWILWAPTLVA 288 (449)
Q Consensus 217 ~f~~~~~~~~~~~~~i~~~~~e~~~~~--~~~---~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 288 (449)
+|++.++..++..+...+..||+++++ +++ ..++.++++++||. .+...+...+.... +.....+.|.+.+
T Consensus 159 ~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 237 (356)
T TIGR00901 159 IFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLG-DSAATVLTTLFLL 237 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 999877766555443333345543221 111 12345777888775 54444333333322 2223446676665
Q ss_pred C-C-CccchHHHHHHHH-HHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcc--c--------chhHHHHH
Q 013096 289 D-G-REVHLGLIFPSLL-GARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYD--Y--------QEIGILVA 355 (449)
Q Consensus 289 ~-~-~~~~~g~i~~~~~-~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~--~--------~~~~~~~~ 355 (449)
+ + +..+.|.+....+ ++.++|..+.+++.| |+++++.+..+.++.++......+. . .+.+....
T Consensus 238 ~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~---r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (356)
T TIGR00901 238 DMGFSKEEIALVAKINGLLGAILGGLIGGIIMQ---PLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFL 314 (356)
T ss_pred HcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHH
Confidence 4 2 3445666665554 467789999999999 7888777665554444433322211 1 12233344
Q ss_pred HHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHH
Q 013096 356 LFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPAN 396 (449)
Q Consensus 356 ~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~ 396 (449)
..++.+++.++..+...++.+|.+|+++||+.+|+.++..+
T Consensus 315 ~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 315 TITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 45566788888999999999999999999999998766543
No 75
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.92 E-value=3.4e-21 Score=192.96 Aligned_cols=343 Identities=13% Similarity=0.085 Sum_probs=202.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-H---H
Q 013096 62 LFSLASVMEGLWSVFGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-W---K 136 (449)
Q Consensus 62 ~~~l~~~~~~~~~~~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~---~ 136 (449)
.+++...+.+...|+.+...+ ++|.|+.++|++.+...+...+++++.|+++||+||||.++.+...+++... . .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 89 (396)
T TIGR00882 10 FFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYV 89 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555567787765554 6899999999999999999999999999999999999999887666554322 1 1
Q ss_pred Hh-----cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccccc
Q 013096 137 SI-----TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVK 211 (449)
Q Consensus 137 ~~-----~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~ 211 (449)
.. +....+++.|+++|++.+...+..+++. .+.. |+.. ..++.......++.+++|.+++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~-~~~~-----~~~g~~~~~~~~g~~~g~~~~g~l~~---- 158 (396)
T TIGR00882 90 FGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYI-EKVS-RNSN-----FEYGKARMFGCVGWALCASIAGILFS---- 158 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHH-HHhh-hhcc-----cccchhhhhcccHHHHHHHHHhhhhc----
Confidence 11 1233456778889988887777665543 3321 1111 12233333445566778888887653
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhccccCCCCCc---------chhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHh
Q 013096 212 KGVVPSSTASVFLSILGIICVSRGWTENPKMAF---------DDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILW 282 (449)
Q Consensus 212 ~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (449)
.+|+.+|++.+.+.++..++.....||++++++ ++.+.+++++++|||+++...+...+... .+.....|
T Consensus 159 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~~~~~ 237 (396)
T TIGR00882 159 IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVAC-VYDVFDQQ 237 (396)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHH-HHHHHHHH
Confidence 388999988766555444333333344322110 01112346788999988765544333322 22222334
Q ss_pred hhhhccC-----C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHH
Q 013096 283 APTLVAD-----G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVAL 356 (449)
Q Consensus 283 ~p~~~~~-----~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~ 356 (449)
.|.+.++ + +....|...+...+...++....+++.| |+++++.+..+..+.++......... +.+.....
T Consensus 238 ~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~---r~g~~~~l~~~~~l~~l~~~~~~~~~-~~~~~~~~ 313 (396)
T TIGR00882 238 FANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIIN---RIGAKNALLIAGTIMSVRIIGSSFAT-TALEVVIL 313 (396)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccchhHHHHHHHHHHHHHHHHhcC-ChHHHHHH
Confidence 5555432 1 1233566666666677778888999999 78888877766655555444333322 33333333
Q ss_pred HHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHh-hHHHHHHHHHHHHHH-hHHhhhcchhHHHHH
Q 013096 357 FCLFHACVGLILPSLARLRTMYVPNELRGGMISL-SLAPANAAILLFLLL-RGFYRNIENAAMVAF 420 (449)
Q Consensus 357 ~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~ 420 (449)
.++.+.+.+........+..+..|++.+++..+. .+...+++...++.. |.+.+..|++..+.+
T Consensus 314 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~ 379 (396)
T TIGR00882 314 KMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLV 379 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHH
Confidence 3344444443333444455667788888776655 445555554444433 455566666554443
No 76
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.92 E-value=6.7e-22 Score=196.61 Aligned_cols=329 Identities=13% Similarity=0.049 Sum_probs=196.5
Q ss_pred HHHHHHHHHhC--CChHHHHHHH-----HHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchh----
Q 013096 75 VFGEYELVYYG--VAKEQMMLLL-----CAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHP---- 142 (449)
Q Consensus 75 ~~~~~l~~~~g--~s~~~ig~l~-----~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~---- 142 (449)
+..+.+.+++. .++++.+.+. ..+++...+++++.|+++||+||||+++.+.++..++++ +.++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGI 93 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHH
Confidence 33344444432 4456666433 344555567889999999999999999999999888776 77788765
Q ss_pred ----HHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc-----ccCC
Q 013096 143 ----SVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID-----VKKG 213 (449)
Q Consensus 143 ----~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~-----~~~g 213 (449)
.+++.|+++|++.+...+...+ ++.|.. ++++.++..+....+..++.++++.++..+.... ..++
T Consensus 94 ~~~~~~~~~r~l~G~~~~~~~~~~~~-~~~~~~----~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~ 168 (394)
T TIGR00883 94 WAPILLLLARLIQGFSLGGEWGGAAL-YLAEYA----PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWG 168 (394)
T ss_pred HHHHHHHHHHHHHHhhccccccccHH-HhhhcC----CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccc
Confidence 5889999999999887776554 344432 2333445555555555666666666655442200 1358
Q ss_pred cchhHHHHHHHHHHHHHHHHhccccCCCCCc----chhhhhhhHhhhcChh--HHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 013096 214 VVPSSTASVFLSILGIICVSRGWTENPKMAF----DDYRTSFFTYIFGDKR--IWLLVLAQACLQFSIALFWILWAPTLV 287 (449)
Q Consensus 214 ~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~----~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~ 287 (449)
||++|.+.....+++.. .....||+++.++ ++..++++++.+++++ ++.......+.... +.....+.|.+.
T Consensus 169 w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 246 (394)
T TIGR00883 169 WRIPFLVSAVLVLIGLY-LRRNLEETPVFEKAQEKHKKKRGPIRETLTKHRKPFLLGLGLVIATTTT-FYLITTYLPTYL 246 (394)
T ss_pred hHHHHHHHHHHHHHHHH-HHHhcCCChhHHHHHhccccccCCHHHHHHhchHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 99999887666555443 3334566543211 1112234566666654 44433333222222 223344677776
Q ss_pred cC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHH-HHH-HHHhc-ccchhHHHHHHHHHHH
Q 013096 288 AD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG-FVF-SIIAY-DYQEIGILVALFCLFH 361 (449)
Q Consensus 288 ~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~-~~l-~~~~~-~~~~~~~~~~~~~l~~ 361 (449)
++ + ++.+.+.......++..++..+.+++.| |+++++.+.....+.. ..+ ..... ...+.+......++.+
T Consensus 247 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 323 (394)
T TIGR00883 247 TQTLGLSANSALLVLMLSLILFFITIPLSGALSD---RIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLA 323 (394)
T ss_pred HHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH---HhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 43 2 3445666666677788889999999999 7887775553322222 111 11112 1222333334445566
Q ss_pred HHhhhhhhHHHHHHhccCCCcchhHHHHhhH-HHHHHHHHHHHHH-hHHhhhcc
Q 013096 362 ACVGLILPSLARLRTMYVPNELRGGMISLSL-APANAAILLFLLL-RGFYRNIE 413 (449)
Q Consensus 362 ~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~-~~~~~~~~~~~~~-g~~~~~~~ 413 (449)
++.+...+..++..+|.+|++.|+++.++.. .....+...++.. |.+.+..+
T Consensus 324 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 324 LIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 6777788888899999999999999888743 3333443334443 44455544
No 77
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.91 E-value=1.3e-21 Score=187.84 Aligned_cols=331 Identities=17% Similarity=0.157 Sum_probs=219.8
Q ss_pred hhhhHHHHHH---HHHHHHHhh-hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHH
Q 013096 53 VPFQRNFLLL---FSLASVMEG-LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFIL 128 (449)
Q Consensus 53 ~~~~~~~~~~---~~l~~~~~~-~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~ 128 (449)
|+-|++.+.+ ++...+.-| +.+|..+.+-+++|+|++|.+++.++..+.+.+..++.|.+.||+|-|++...+.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 4444444433 334444445 356777777789999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhc---chhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 013096 129 HLFVGV-WKSIT---AHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANW 204 (449)
Q Consensus 129 ~~~~~l-~~~~~---s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~ 204 (449)
..+-++ .+++. |++++++.+++.|++.+...... . +..+-+|+++.+.+++....+ +++..+...++.+
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m-~-----~~s~~fP~~~qG~AlGI~g~G-N~G~av~q~~~P~ 161 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGM-P-----NASFFFPKEKQGLALGIAGAG-NLGVAVAQLVAPL 161 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcccceehccc-c-----cccccCChhhhhHHHHHhccc-cccHHHHHHHHHH
Confidence 888776 56654 45699999999999987543221 1 123447888888888877633 3444445555555
Q ss_pred HhcccccCC---cchhHHHHHHHHHHHHHHHHhccccCCC-CCcchhhh-hhhHhhhcChhHHHHHHHHHHHHHHHHHHH
Q 013096 205 LVGIDVKKG---VVPSSTASVFLSILGIICVSRGWTENPK-MAFDDYRT-SFFTYIFGDKRIWLLVLAQACLQFSIALFW 279 (449)
Q Consensus 205 l~~~~~~~g---~~~~f~~~~~~~~~~~~~i~~~~~e~~~-~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 279 (449)
+.... + |+..-.+-.+..++..+..++..++.+. +++++.++ ..++.+++||++|.+.+.....+++ +...
T Consensus 162 v~~~~---g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~-Fvgf 237 (417)
T COG2223 162 VAVAF---GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLPAQLKAVFSNKDTWLLSLLYFATFGG-FVGF 237 (417)
T ss_pred HHHHH---hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccchhHHHHHhcCcchHHHHHHHHHHHHH-HHHH
Confidence 55444 4 6665555554444444444444444433 22222222 5588899999999887765544443 4444
Q ss_pred HHhhhhhccCC---CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc------chh
Q 013096 280 ILWAPTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY------QEI 350 (449)
Q Consensus 280 ~~~~p~~~~~~---~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~------~~~ 350 (449)
..|.|.+++++ ++.+.|.+.........+...+.|+++| |++.+|.+...+..+.++..+..+.. .+.
T Consensus 238 s~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsD---R~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~ 314 (417)
T COG2223 238 SAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSD---RIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSF 314 (417)
T ss_pred HHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhh---hccchhHHHHHHHHHHHHHHHHHccccccccCcch
Confidence 66889988763 4455666655555666677889999999 89999988777666665555444332 223
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHH
Q 013096 351 GILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 398 (449)
Q Consensus 351 ~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~ 398 (449)
...+..++...++.|+...+...++...+|+ +-|.+.|+.....+++
T Consensus 315 ~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lG 361 (417)
T COG2223 315 VVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLG 361 (417)
T ss_pred HHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhcccc
Confidence 3344445555667777777766666666664 4577788766655554
No 78
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.89 E-value=2.4e-19 Score=179.24 Aligned_cols=349 Identities=12% Similarity=0.010 Sum_probs=200.3
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHH--HHHHHhHHHHHHHHHh-hhhhhCchHHHHHHHHHH-HHHHH-HH
Q 013096 62 LFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLL--CAGFSAALFVGSFLGM-ISDLIGQKKVCLIFFILH-LFVGV-WK 136 (449)
Q Consensus 62 ~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~--~~~~~~~~l~~~~~G~-laDr~GRr~~ll~~~~~~-~~~~l-~~ 136 (449)
+|+.-....++..|+.|...+|.|.|++++|... ........+.+|+.+. .+||+||||..+..+.+. ..... ..
T Consensus 9 ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~ 88 (390)
T TIGR02718 9 LYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLA 88 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHH
Confidence 3444444456778999999999999999999863 5557778888888844 799999999976654332 21111 22
Q ss_pred -H--hcc-hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 013096 137 -S--ITA-HPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKK 212 (449)
Q Consensus 137 -~--~~s-~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~ 212 (449)
. .++ ..+++..-.+.++..+..-+..+++ ..+..++++.+...+....+..++.++++.+.+++.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~-----~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~--- 160 (390)
T TIGR02718 89 LVGPDVAGAGWAVGLLACASLASATQDIATDGM-----AAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF--- 160 (390)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 1 222 2233333333333333333333322 222234444444444444455667777777777777755
Q ss_pred CcchhHHHHHHHHHHHHHHHHhccccCCCCCc-chhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C
Q 013096 213 GVVPSSTASVFLSILGIICVSRGWTENPKMAF-DDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G 290 (449)
Q Consensus 213 g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~ 290 (449)
|||.+|++.+.+.++..+...+..||++++++ ++.+..++++++|||+.+.......+........ ..+.|.+..| +
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~l~~~G 239 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVLWLKDRAVASPEAPLARRASLFRFFRRPLAWSLLALALLSAMTAVSG-FGLSKLYLVDAG 239 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccchhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHH-HHHhhHHHHhcC
Confidence 89999998776655544433333333222211 1222334678888888765554444433322222 2345555544 3
Q ss_pred -CccchHHHHHHHH-HHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHH-HHhcc----cchhHHHHHHHHHHHHH
Q 013096 291 -REVHLGLIFPSLL-GARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFS-IIAYD----YQEIGILVALFCLFHAC 363 (449)
Q Consensus 291 -~~~~~g~i~~~~~-~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~-~~~~~----~~~~~~~~~~~~l~~~~ 363 (449)
++.+.|.++.... ...++|..+.+++.| |++++|.+..+..+.++... ..... ............+.+++
T Consensus 240 ~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~---r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (390)
T TIGR02718 240 WPLEWIGRLGMAGGAVTVLLGCGGGAWLVR---RAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLI 316 (390)
T ss_pred CCHHHHHHHHhHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHH
Confidence 3455677766554 366788889999999 78888877655443322111 11111 11111222222333455
Q ss_pred hhhhhhHHHHHHhccCCC-cchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHH
Q 013096 364 VGLILPSLARLRTMYVPN-ELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAA 422 (449)
Q Consensus 364 ~g~~~p~~~~~~~~~~p~-~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 422 (449)
.|...+...+...+..++ +.+|+.++..+...+++...++.. |.+.+..+++..+..+.
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~ 377 (390)
T TIGR02718 317 TGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGT 377 (390)
T ss_pred HHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 677777777777777766 789999999988888876555555 44456566655444433
No 79
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.89 E-value=1.7e-20 Score=190.12 Aligned_cols=321 Identities=14% Similarity=0.072 Sum_probs=192.5
Q ss_pred hhhhHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhh----hCchH-HHHHHHHHHHHHHH-HHHhcc---
Q 013096 71 GLWSVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDL----IGQKK-VCLIFFILHLFVGV-WKSITA--- 140 (449)
Q Consensus 71 ~~~~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr----~GRr~-~ll~~~~~~~~~~l-~~~~~s--- 140 (449)
.+..++++..+ +++|+|+.++|.+.++..+..++.+|+.|+++|| +|||| .++.+....+++.+ +...++
T Consensus 16 ~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~ 95 (437)
T TIGR00792 16 AIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSA 95 (437)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCc
Confidence 34455554445 4789999999999999999999999999999998 78855 46667777776654 544443
Q ss_pred ---hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc----ccCC
Q 013096 141 ---HPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID----VKKG 213 (449)
Q Consensus 141 ---~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~----~~~g 213 (449)
+..+++.+++.+++.+.......+ +..|.. .+.++.++..+.......++.++++.+.+.+.... ..++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~a-l~~~~~---~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g 171 (437)
T TIGR00792 96 TGKLVYAYITYILLGLFYSFVNIPYWS-LVPAIT---LDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG 171 (437)
T ss_pred chHHHHHHHHHHHHHHHHHhhcccHhh-Cccccc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 456777888888887764433333 222221 12233344444433333333333333322222110 0248
Q ss_pred cchhHHHHHHHHHHHHHHHHhccccCCCC-Cc--c--hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 013096 214 VVPSSTASVFLSILGIICVSRGWTENPKM-AF--D--DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA 288 (449)
Q Consensus 214 ~~~~f~~~~~~~~~~~~~i~~~~~e~~~~-~~--~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 288 (449)
||..+.+..++.++..+...+..||++++ ++ + ...++.++.+++||+++.+.+...+.....+.. ..+.|.+.+
T Consensus 172 ~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 250 (437)
T TIGR00792 172 WFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIK-NGVQVYYFT 250 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-cchhheeEe
Confidence 88888876666555544444455665422 11 1 112345778899998887655444443333322 223454443
Q ss_pred C--CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhh
Q 013096 289 D--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGL 366 (449)
Q Consensus 289 ~--~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~ 366 (449)
+ +++...+.......++.+++..+.+++.| |+++++....+..+.++......+..++.+......++.+++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 327 (437)
T TIGR00792 251 YVLGDPELFSYMGSIAIVAGLIGVLLFPRLVK---KFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNF 327 (437)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHH
Confidence 3 22333455555566788899999999999 788887766665544444433333222333334444556677777
Q ss_pred hhhHHHHHHhccCC-------CcchhHHHHhhHHHHHHHH
Q 013096 367 ILPSLARLRTMYVP-------NELRGGMISLSLAPANAAI 399 (449)
Q Consensus 367 ~~p~~~~~~~~~~p-------~~~rg~~~~~~~~~~~~~~ 399 (449)
..+...++.+|..| ++.+|+.+|+.+....++.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~ 367 (437)
T TIGR00792 328 VTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQ 367 (437)
T ss_pred HHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHH
Confidence 78888888877765 4557888888887666654
No 80
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.89 E-value=1.5e-19 Score=185.34 Aligned_cols=316 Identities=12% Similarity=0.034 Sum_probs=184.5
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhh-hCchHHHHHHHHHHHHHHH-HHHhcchhH-HHHHHHHHHhH
Q 013096 78 EYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDL-IGQKKVCLIFFILHLFVGV-WKSITAHPS-VWVANICLSLA 154 (449)
Q Consensus 78 ~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr-~GRr~~ll~~~~~~~~~~l-~~~~~s~~~-l~~~R~l~Glg 154 (449)
..+.+++|+++++.+++...+.....+..+++|+++|| +||||+++++.+++.++++ +.++++.+. ++++|+++|+|
T Consensus 39 ~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig 118 (489)
T PRK10207 39 VFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVG 118 (489)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc
Confidence 34446899999998888887777777778899999999 9999999999999999876 777766554 55899999999
Q ss_pred HHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHH---
Q 013096 155 SSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIIC--- 231 (449)
Q Consensus 155 ~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~--- 231 (449)
.|...+...+ ++.|.-+++.+ +..+.++.......++..++|.+++++.++. |||+.|.+..+..++..+.
T Consensus 119 ~g~~~~~~~~-li~~~~p~~~~--~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~---gw~~~F~i~~i~~~~~~~~~~~ 192 (489)
T PRK10207 119 NGLFKANPAS-LLSKCYPPKDP--RLDGAFTLFYMSINIGSLISLSLAPVIADKF---GYSVTYNLCGAGLIIALLVYFA 192 (489)
T ss_pred cccccCCHHH-HHHHhcCCCch--hhhcchhHHHHHHHHHHHHHHHHHHHHHHhh---ChHHHHHHHHHHHHHHHHHHHH
Confidence 9988777654 45554222211 2334566666677778888999999998865 8999998754332222211
Q ss_pred HHhccccCCCC--C-cchhh-------------------hh--hh-----------------------HhhhcChhHHHH
Q 013096 232 VSRGWTENPKM--A-FDDYR-------------------TS--FF-----------------------TYIFGDKRIWLL 264 (449)
Q Consensus 232 i~~~~~e~~~~--~-~~~~~-------------------~~--~~-----------------------~~l~~~~~~~~~ 264 (449)
..+..++.+++ + +.+.. .+ .. ++++|+|.+...
T Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~ 272 (489)
T PRK10207 193 CRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAF 272 (489)
T ss_pred cchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 11122221111 1 00100 00 00 012222222221
Q ss_pred HHH-HHHHHHHHHHHHHHhhhhhccC-CC------ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchh-------HH
Q 013096 265 VLA-QACLQFSIALFWILWAPTLVAD-GR------EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED-------CL 329 (449)
Q Consensus 265 ~~~-~~~~~~~~~~~~~~~~p~~~~~-~~------~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~-------~l 329 (449)
.+. ........+.......|.+.++ .+ +...+.+...+.+..++.+++.+++.+ |.++++ ..
T Consensus 273 ~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~---rl~~r~~~~~~~~k~ 349 (489)
T PRK10207 273 VLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYT---HLGSKGKDLSMPMKF 349 (489)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHH---HHhhCCCCCCcHHHH
Confidence 111 1111222222111223333332 11 112222323333445455555666665 333332 34
Q ss_pred HHHHHHHHHHHHHH-----hcc----cchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHH
Q 013096 330 LYAFVVLGFVFSII-----AYD----YQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAIL 400 (449)
Q Consensus 330 ~~~~~~~~~~l~~~-----~~~----~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~ 400 (449)
..++.+.++++... .+. ..+.++.+...++.+++.++..|...+...+..|++.+|.++|+.....+++..
T Consensus 350 ~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~ 429 (489)
T PRK10207 350 TLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFL 429 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 45555554443221 111 113344556777788999999999999999999999999999998876666543
Q ss_pred HH
Q 013096 401 LF 402 (449)
Q Consensus 401 ~~ 402 (449)
.+
T Consensus 430 lg 431 (489)
T PRK10207 430 LG 431 (489)
T ss_pred HH
Confidence 33
No 81
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=8.9e-19 Score=179.31 Aligned_cols=322 Identities=13% Similarity=0.058 Sum_probs=193.6
Q ss_pred hhHHHHHHHH-H--hCCChHHHHHHHHHHHHhHHHHHHHHHhhhhh-hCchHHHHHHHHHHHHHHH-HHHhcchhHHHHH
Q 013096 73 WSVFGEYELV-Y--YGVAKEQMMLLLCAGFSAALFVGSFLGMISDL-IGQKKVCLIFFILHLFVGV-WKSITAHPSVWVA 147 (449)
Q Consensus 73 ~~~~~~~l~~-~--~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr-~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~ 147 (449)
..++++...+ + +|.|+.+.+.+.+...+...++.+++|+++|| +||||+++++.++++++.+ .+++++.+.+.+.
T Consensus 29 ~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~ 108 (475)
T TIGR00924 29 MQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYG 108 (475)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHH
Confidence 4555554444 4 89999999999999999999999999999999 8999999999999988776 6677888899999
Q ss_pred HHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHH
Q 013096 148 NICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSIL 227 (449)
Q Consensus 148 R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~ 227 (449)
|.+.|+|.|...++..+ ++.|..+++.+ ++.++.++.......++.+++|.+++++.+.+ ||++.|.+.++..++
T Consensus 109 ~~l~g~g~g~~~~~~~~-~~a~~~~~~~~-~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~---g~~~~f~~~~~~~~~ 183 (475)
T TIGR00924 109 LGTIAVGSGLFKANPSS-MVGKLYERGDM-PRRDGGFTLFYMSINIGSFISPLLAGVIAENY---GYHVGFNLAAVGMVI 183 (475)
T ss_pred HHHHHhccccccCCHHH-HHHHhcCCCCc-ccccceehhHHHHHHHHHHHHHHHHHHHHHhc---ChHHHHHHHHHHHHH
Confidence 99999999887776654 44444222211 12334566656666677888999999887755 899999876544333
Q ss_pred HHHHHHh---ccccCCCCC----cch--hhhh--------------------h--------------------------h
Q 013096 228 GIICVSR---GWTENPKMA----FDD--YRTS--------------------F--------------------------F 252 (449)
Q Consensus 228 ~~~~i~~---~~~e~~~~~----~~~--~~~~--------------------~--------------------------~ 252 (449)
+.+.... ..++.++++ +++ ..+. . .
T Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (475)
T TIGR00924 184 GLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRL 263 (475)
T ss_pred HHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3222211 111111111 000 0000 0 0
Q ss_pred HhhhcChhHHHHH--HHHHHHHHHHHHHHHHhhhhhccC---C----CccchHHHHHHHHHHHHHhhhHHH----HHhcC
Q 013096 253 TYIFGDKRIWLLV--LAQACLQFSIALFWILWAPTLVAD---G----REVHLGLIFPSLLGARMLGSTVFP----WLISG 319 (449)
Q Consensus 253 ~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~---~----~~~~~g~i~~~~~~~~~lg~~l~~----~l~~~ 319 (449)
...-++ +...+. +.........|.-...-.|.+.++ . .+.+.+.+.+.+.+..++...+.. ++.+|
T Consensus 264 ~~~~~~-~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~ 342 (475)
T TIGR00924 264 DAVARN-KMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRK 342 (475)
T ss_pred CHHHHh-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 000011 111111 111111112221111112333222 1 223456676666666665555433 45553
Q ss_pred CCCCCchhH--HHHHHHHHHHHHHHHhc--------ccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHH
Q 013096 320 PSSFRTEDC--LLYAFVVLGFVFSIIAY--------DYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMIS 389 (449)
Q Consensus 320 ~~~~~~~~~--l~~~~~~~~~~l~~~~~--------~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~ 389 (449)
. .+++.. ..++.++.+++...... ...+.++.+..+++.+++..+..|...++..+..|++.||+.+|
T Consensus 343 ~--~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g 420 (475)
T TIGR00924 343 G--KDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLG 420 (475)
T ss_pred C--CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHH
Confidence 1 222222 24455555544433321 12245556777788899999999999999999999999999999
Q ss_pred hhHHHHHHHHHHH
Q 013096 390 LSLAPANAAILLF 402 (449)
Q Consensus 390 ~~~~~~~~~~~~~ 402 (449)
+......++...+
T Consensus 421 ~~~l~~~~g~~l~ 433 (475)
T TIGR00924 421 MWFLAQAMGSLLG 433 (475)
T ss_pred HHHHHHHHHHHHH
Confidence 9887766654333
No 82
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.88 E-value=1.6e-18 Score=165.68 Aligned_cols=339 Identities=13% Similarity=0.033 Sum_probs=223.9
Q ss_pred HHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHH----HHhc
Q 013096 64 SLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVW----KSIT 139 (449)
Q Consensus 64 ~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~----~~~~ 139 (449)
++-.+.+.+..+..|.+.+.++++..|.+++..+.+.++.+.+++.|.+.||+|+|+-++.++.++++++.+ +...
T Consensus 23 fl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~ 102 (422)
T COG0738 23 FLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK 102 (422)
T ss_pred HHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 344444556678888888999999999999999999999999999999999999999999999999998853 2346
Q ss_pred chhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----------
Q 013096 140 AHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGI----------- 208 (449)
Q Consensus 140 s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~----------- 208 (449)
++..++++-++.|.|.+..-++.+. ++...-+ ++.-++-++.++..++++++++|.+++.++.+
T Consensus 103 ~y~~FL~~lFila~Gi~~LetaaNp-~v~~lg~----~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~ 177 (422)
T COG0738 103 SYGFFLVALFILASGIGLLETAANP-YVTLLGK----PESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQI 177 (422)
T ss_pred hHHHHHHHHHHHHhhhHHHHhccch-HHHHhCC----chhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence 8889999999999999987777665 4443321 11223344566677888889999999887662
Q ss_pred c----c-cCCcchhHHHHHHHHHHHHH-HHHhccccCCCCCcchhh--hhhhHhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 013096 209 D----V-KKGVVPSSTASVFLSILGII-CVSRGWTENPKMAFDDYR--TSFFTYIFGDKRIWLLVLAQACLQFSIALFWI 280 (449)
Q Consensus 209 ~----~-~~g~~~~f~~~~~~~~~~~~-~i~~~~~e~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (449)
. . -..++.||...+...++..+ ....+.||.+..+.++.+ .....++++||+.+...+.+++.-+ .-.-+.
T Consensus 178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG-~Eva~g 256 (422)
T COG0738 178 LAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQNKHLRLGVLAIFLYVG-AEVAIG 256 (422)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccccchHHHHHhChHHHHHHHHHHHHHh-HHHHHH
Confidence 0 0 01366788765444333322 222344554443222211 1146789999998877766555432 233335
Q ss_pred HhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHH
Q 013096 281 LWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALF 357 (449)
Q Consensus 281 ~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 357 (449)
.|.|.+..+ + ++.+.+...+.+.++.++|..+..++.+ |++++|.+.....+..+.+....+.++ .+.+...
T Consensus 257 sfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~---~~~~~k~Laf~a~~~ill~~~~~l~~g--~v~~~~l 331 (422)
T COG0738 257 SFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMS---RIKPEKYLAFYALIAILLLLAVALIGG--VVALYAL 331 (422)
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCHHHHHHHHHHHHHHHHHHHHHhcC--hHHHHHH
Confidence 577877765 2 3344556667777888999999999998 788889877644333222223334332 2334445
Q ss_pred HHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhcch
Q 013096 358 CLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIEN 414 (449)
Q Consensus 358 ~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 414 (449)
.+.++.++..+|...++..+..| ++-..+.++.-+..-.+.+.++++|...|..+.
T Consensus 332 ~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 332 FLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred HHHHHHhHHHHHHHHHHHHhccC-ccccccceeeeeheecchHHHHHHHHHHHhhhh
Confidence 56688899999999999999988 433333333222222223445556766666553
No 83
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.87 E-value=9e-18 Score=172.93 Aligned_cols=306 Identities=13% Similarity=0.077 Sum_probs=179.1
Q ss_pred HHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhh-hCchHHHHHHHHHHHHHHH-HHHhc-chhHHHHHHHHHHhHHHH
Q 013096 81 LVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDL-IGQKKVCLIFFILHLFVGV-WKSIT-AHPSVWVANICLSLASSI 157 (449)
Q Consensus 81 ~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr-~GRr~~ll~~~~~~~~~~l-~~~~~-s~~~l~~~R~l~Glg~~~ 157 (449)
.+++|+|+++.+.+.+..........+++|+++|| +|||++++.+.+++.++.. +.+++ +.+.+++.|+++|+|.|.
T Consensus 49 ~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~ 128 (500)
T PRK09584 49 VKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGL 128 (500)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhc
Confidence 36899999988877766554444555789999999 5999999999999888765 66654 566778899999999997
Q ss_pred hhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHH---HHHHHh
Q 013096 158 FSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILG---IICVSR 234 (449)
Q Consensus 158 ~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~---~~~i~~ 234 (449)
..+...+ ++.|.-+++ +++..+.++.......++..++|.+++++.+.+ |||+.|.+..+..+++ .+...+
T Consensus 129 ~~~~~~~-l~~~~f~~~--~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~---g~~~~F~i~~i~~~i~~i~~~~~~~ 202 (500)
T PRK09584 129 FKANPSS-LLSTCYEKD--DPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY---GWSVAFALSVVGMLITVVNFAFCQR 202 (500)
T ss_pred ccCCHHH-HHHHhcCCC--chhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7666544 444432111 112333555555666777888999999988765 8999999866533332 222233
Q ss_pred ccccCCC-CC-c-chhhh---------------------hh-----------------hHhhhc-----ChhHHHHHHHH
Q 013096 235 GWTENPK-MA-F-DDYRT---------------------SF-----------------FTYIFG-----DKRIWLLVLAQ 268 (449)
Q Consensus 235 ~~~e~~~-~~-~-~~~~~---------------------~~-----------------~~~l~~-----~~~~~~~~~~~ 268 (449)
..+|..+ ++ + .+..+ .. .+...+ ++|.+.... .
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 281 (500)
T PRK09584 203 WVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAARRKMIVAFI-L 281 (500)
T ss_pred HhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH-H
Confidence 3343211 11 0 00000 00 000000 122222111 1
Q ss_pred HHHHHHHHHHHHHhhhhhcc----C-C------CccchHHHHHHHHHHHHHhhhHH----HHHhcCCCCCCchhHHHHHH
Q 013096 269 ACLQFSIALFWILWAPTLVA----D-G------REVHLGLIFPSLLGARMLGSTVF----PWLISGPSSFRTEDCLLYAF 333 (449)
Q Consensus 269 ~~~~~~~~~~~~~~~p~~~~----~-~------~~~~~g~i~~~~~~~~~lg~~l~----~~l~~~~~~~~~~~~l~~~~ 333 (449)
+.....|.....-.|..+. + . ...+.+.+.+.+.+..++...+. +++.+ |.+..+...+++
T Consensus 282 -~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~---r~~~~~~~~~G~ 357 (500)
T PRK09584 282 -MLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGD---RLPMPHKFAIGM 357 (500)
T ss_pred -HHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCc---CCCcHHHHHHHH
Confidence 1111111111112233321 1 1 11234455555554444444444 55554 555566666777
Q ss_pred HHHHHHHHHHhcccc--------hhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHH
Q 013096 334 VVLGFVFSIIAYDYQ--------EIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 397 (449)
Q Consensus 334 ~~~~~~l~~~~~~~~--------~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~ 397 (449)
.+.+++......... +.++.+...++.+++.++..|...++..+..|++.||+++|........
T Consensus 358 ~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~ 429 (500)
T PRK09584 358 VLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAG 429 (500)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 777766554332211 1334566777888999999999999999999999999999976544433
No 84
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.2e-19 Score=181.10 Aligned_cols=318 Identities=12% Similarity=0.075 Sum_probs=209.2
Q ss_pred HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHH--hcchhHHHHHHHHHHhHHHHhh
Q 013096 83 YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKS--ITAHPSVWVANICLSLASSIFS 159 (449)
Q Consensus 83 ~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~--~~s~~~l~~~R~l~Glg~~~~~ 159 (449)
+++.|++|.+.+++..+.++.+++.+.|+++||+|-|+++..+.++.++.++ ... ..+++.+++.|++||++.|..+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 6888999999999999999999999999999999999999999999988775 443 3577788999999999999988
Q ss_pred hhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccC
Q 013096 160 FNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTEN 239 (449)
Q Consensus 160 ~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~ 239 (449)
|+... + ..+-.|.++.++..+....+..++.+++-++++++.+.. +||+++|++.+....+..++......|+
T Consensus 147 pa~~~-i----~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~--~GW~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 147 PAIGS-I----LAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESS--LGWPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred hhhhc-e----eeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC--CCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 87533 1 223456677778888877777788888888899988862 4999999986665554433222223333
Q ss_pred CCC----C--cch---------h----hhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHH
Q 013096 240 PKM----A--FDD---------Y----RTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGL 297 (449)
Q Consensus 240 ~~~----~--~~~---------~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~ 297 (449)
+.+ . +++ . .+.+|+++++++.+|...+...+.+.+.+.+ ..|.|+|+++ + +-.+.|+
T Consensus 220 P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l-~~y~PtY~~~VL~f~v~~~G~ 298 (466)
T KOG2532|consen 220 PSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLL-LTYLPTYLKEVLGFDVRETGF 298 (466)
T ss_pred cccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHhhHHHHHHhCCChhhhhH
Confidence 221 1 100 0 1236999999999999887776666665554 5689999985 2 2234555
Q ss_pred HHHHHHHHHHHhhhHHHHHhcCCCC--CCc---hhHH-HHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHhhhhhhH
Q 013096 298 IFPSLLGARMLGSTVFPWLISGPSS--FRT---EDCL-LYAFVVLGFVFSIIAYDYQ-EIGILVALFCLFHACVGLILPS 370 (449)
Q Consensus 298 i~~~~~~~~~lg~~l~~~l~~~~~~--~~~---~~~l-~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~l~~~~~g~~~p~ 370 (449)
..+.--+.+.+-..++++++|+..+ .+. +|.. .++....++.+..+.+..+ ..+..+..+.+.....|...+.
T Consensus 299 ~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~G 378 (466)
T KOG2532|consen 299 LSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISG 378 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhh
Confidence 5444445555555555555552211 221 1221 2345555666665555543 2222333333333344555555
Q ss_pred HHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHh
Q 013096 371 LARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFY 409 (449)
Q Consensus 371 ~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~ 409 (449)
...-..+..| ++-+.++|+.+...++.....+.. |.+.
T Consensus 379 f~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~ 417 (466)
T KOG2532|consen 379 FYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIV 417 (466)
T ss_pred hHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEe
Confidence 4444444444 667889999998888776555543 5554
No 85
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.84 E-value=2.4e-17 Score=155.43 Aligned_cols=324 Identities=11% Similarity=0.051 Sum_probs=217.0
Q ss_pred hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 013096 73 WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVWKSITAHPSVWVANICLS 152 (449)
Q Consensus 73 ~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~~~~~s~~~l~~~R~l~G 152 (449)
.+|.++.+.+|+|+|.++.|++.+.-.++..+++|+..+++.|+|-++.+..++++-.++++.-...+.+.|+.+-.+.|
T Consensus 31 vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~G 110 (395)
T COG2807 31 VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLAG 110 (395)
T ss_pred hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 47888888899999999999999999999999999999999999999999999888888776444458889999999999
Q ss_pred hHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHH
Q 013096 153 LASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICV 232 (449)
Q Consensus 153 lg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i 232 (449)
.|.+..- .+.+...||++|++ .+...+.++...+.+..+++.+.-.+.++. .+||....+-+.+.+++++..
T Consensus 111 ~gIav~n-----VLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~--~gW~~aL~~WAl~allAl~~W 182 (395)
T COG2807 111 AGIAVIN-----VLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHS--GGWRGALGFWALLALLALLIW 182 (395)
T ss_pred hhHHHHH-----HhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhh--ccHHHHHHHHHHHHHHHHHHH
Confidence 9988642 24455567887765 566666665555554555555555554443 368877666555555554322
Q ss_pred HhccccCCCC--CcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHHHHHHHHH
Q 013096 233 SRGWTENPKM--AFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPSLLGARML 308 (449)
Q Consensus 233 ~~~~~e~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~l 308 (449)
+|...++ ++.+....+-..++|||..|.+++...+.+.. |+.+..|.|.++.| | +..+.|...+...+..+.
T Consensus 183 ---lPq~~r~~~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~-~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~ 258 (395)
T COG2807 183 ---LPQALREQAASIATKLVSVRKVWRSPLAWQVTLFMGLQSLL-YYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLP 258 (395)
T ss_pred ---hhhcccccccccccccccccccccCchhHHHHHHHHhhHHH-HHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHH
Confidence 2321111 11111111234689999999888776665554 44557799999876 3 566778777777788888
Q ss_pred hhhHHHHHhcCCCCCCchhHHHH-HHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcch-hH
Q 013096 309 GSTVFPWLISGPSSFRTEDCLLY-AFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELR-GG 386 (449)
Q Consensus 309 g~~l~~~l~~~~~~~~~~~~l~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~r-g~ 386 (449)
.+.+.+.+.+ |.+.+|.+.. ......+++....+.+.+.. ..+ .++++++.|..+|....+.....++.++ ++
T Consensus 259 ~~ll~P~la~---R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~-~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~ 333 (395)
T COG2807 259 TALLIPLLAR---RSKNQRPLVVLALLLMLVGLVGLLLAPGQLP-ILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAA 333 (395)
T ss_pred HHHHHHHHHH---HhcccchHHHHHHHHHHHHHHHHHHhhhhHH-HHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHH
Confidence 8888898888 4444444333 22222233333323332221 222 3567888899999988888877765554 45
Q ss_pred HHHhhHHHHHHHHHHHHH-HhHHhhhcc
Q 013096 387 MISLSLAPANAAILLFLL-LRGFYRNIE 413 (449)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 413 (449)
..++.|...++....++. .|.+.|..+
T Consensus 334 LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 334 LSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred HHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 577788777776544444 466666654
No 86
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.83 E-value=1.3e-16 Score=156.80 Aligned_cols=356 Identities=18% Similarity=0.146 Sum_probs=197.0
Q ss_pred hhhhHHHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHH--HHH--HHH----hcch
Q 013096 71 GLWSVFGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLF--VGV--WKS----ITAH 141 (449)
Q Consensus 71 ~~~~~~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~--~~l--~~~----~~s~ 141 (449)
+...|+.+.-.+ +.|+|++|+|.+++++.+...+.+|+.|.++||+|.||-++....+..+ +.. ..+ ..|+
T Consensus 24 gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~ 103 (412)
T PF01306_consen 24 GIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNF 103 (412)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-
T ss_pred HHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355677654444 4899999999999999999999999999999999977776654433221 221 111 1233
Q ss_pred h-HHHHHHHHHHhHHHHhhhhhHHHHHHHHHhh-cCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHH
Q 013096 142 P-SVWVANICLSLASSIFSFNFETWVAIEHEKQ-GQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSST 219 (449)
Q Consensus 142 ~-~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r-~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~ 219 (449)
+ ..+++-+..|+......|..|+ ++.+..++ ++ +.++ .-..++++.+++..++|.+.+. +.+..|+
T Consensus 104 ~lg~iig~i~l~~~f~~~~~~~Ea-~~er~sr~~~f---eYG~----~R~wGSig~ai~s~~~G~L~~i----~p~~~fw 171 (412)
T PF01306_consen 104 WLGAIIGGIYLGLVFNAGVPLSEA-YAERVSRRNGF---EYGR----ARMWGSIGFAIASLLAGILFNI----NPNIIFW 171 (412)
T ss_dssp HHHHHHTTTTTTTTTTTHHHHHHH-HHHHHHHHHSS----HHH----HHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccchHHHH-HHHHHHHHhcC---Ccch----HHHHhhHHHHHHHHHhheeeee----CccHHHH
Confidence 2 2223333334444444566665 43333222 22 1222 2233445555566667776653 3346788
Q ss_pred HHHHHHHHHHHHHHhccccCCCC----Ccc--hhh---hhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhcc--
Q 013096 220 ASVFLSILGIICVSRGWTENPKM----AFD--DYR---TSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA-- 288 (449)
Q Consensus 220 ~~~~~~~~~~~~i~~~~~e~~~~----~~~--~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-- 288 (449)
++....++..++.....|+.+++ +.+ +.+ .+...+++|+|++|.+.+.........+.+-.. -|.+..
T Consensus 172 i~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqq-f~~y~~~~ 250 (412)
T PF01306_consen 172 IASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQ-FPIYFASF 250 (412)
T ss_dssp HHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 76554443333333222222211 111 111 123567899999998766433333222222211 233322
Q ss_pred --C-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHh
Q 013096 289 --D-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACV 364 (449)
Q Consensus 289 --~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 364 (449)
+ + .+..+|...+.....-.+.-.+.+++.+ |++.|+.+.++..++.+=....++.++ .+.....=.+.++-.
T Consensus 251 f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~---rig~k~~Lllag~i~~iRi~~~~~~~~-~~~i~~~klLH~~e~ 326 (412)
T PF01306_consen 251 FQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLIN---RIGAKNLLLLAGVIMAIRIIGSGFATN-PWVISLIKLLHALEF 326 (412)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHT--S-HHHHHHHHHHHHHHH
T ss_pred hcccccChhHHhHHHHHHHHHHHHHHHHHHHHHH---hcChHhHHHHHHHHHHHHHHHHhhhcc-hHHHHHHHHHHHHHH
Confidence 2 1 2234777777766777777788999998 899999888776666554444444443 233333334555556
Q ss_pred hhhhhHHHHHHhccCCCcchhHHHHhh-HHHHHHHH-HHHHHHhHHhhhcchh-HHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013096 365 GLILPSLARLRTMYVPNELRGGMISLS-LAPANAAI-LLFLLLRGFYRNIENA-AMVAFAALGLFIAAGCMHVLKRWGKQ 441 (449)
Q Consensus 365 g~~~p~~~~~~~~~~p~~~rg~~~~~~-~~~~~~~~-~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~ 441 (449)
++...+..-+.++.+|++..+|...+. +...+++. +..+..|..+|+.|.. +-++++.+.+...++....+++.+++
T Consensus 327 ~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 327 PLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 667777888999999999999988774 44455543 3445557778888864 44456655555555566666665554
Q ss_pred CC
Q 013096 442 PY 443 (449)
Q Consensus 442 ~~ 443 (449)
..
T Consensus 407 ~~ 408 (412)
T PF01306_consen 407 IV 408 (412)
T ss_dssp TC
T ss_pred cc
Confidence 33
No 87
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=3.9e-18 Score=161.04 Aligned_cols=314 Identities=12% Similarity=0.058 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHH
Q 013096 89 EQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVA 167 (449)
Q Consensus 89 ~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v 167 (449)
.-.|.+-+.+.+.+++.++.+|.+|||||||+++++|++.-+++.+ ++.+.|+..+.++|++.|+.-|.....- .++
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~r--Aii 145 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIR--AII 145 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHH--HHH
Confidence 3456777888889999999999999999999999999988888766 8888999666666999999988765442 255
Q ss_pred HHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHH-H---HHHHHHHHHHHHhccccCCCCC
Q 013096 168 IEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTA-S---VFLSILGIICVSRGWTENPKMA 243 (449)
Q Consensus 168 ~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~-~---~~~~~~~~~~i~~~~~e~~~~~ 243 (449)
+|.. ++++.+..++.+....+++.++||++|+++.......| +.||.. . .++..........+.|||.+.+
T Consensus 146 sdV~----sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~r 220 (451)
T KOG2615|consen 146 SDVV----SEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLR 220 (451)
T ss_pred Hhhc----ChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccch
Confidence 6552 33445556676667777889999999999876110012 345554 1 1222221222334578875432
Q ss_pred cch-----------hhhh--hh-----HhhhcChhHHHHHHHH--HHHHHHHHHHHH-Hh--hhhhcc-CC---CccchH
Q 013096 244 FDD-----------YRTS--FF-----TYIFGDKRIWLLVLAQ--ACLQFSIALFWI-LW--APTLVA-DG---REVHLG 296 (449)
Q Consensus 244 ~~~-----------~~~~--~~-----~~l~~~~~~~~~~~~~--~~~~~~~~~~~~-~~--~p~~~~-~~---~~~~~g 296 (449)
++. .+++ .. ....+|++..-..... .......|.+++ .| .+..+. ++ ++.+.|
T Consensus 221 k~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G 300 (451)
T KOG2615|consen 221 KRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG 300 (451)
T ss_pred hhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence 110 0000 01 1233444332211100 011111122111 11 222232 21 455566
Q ss_pred HHHHHHHHHHHHhhhHHHHHhcCCCCCCchh-HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHH
Q 013096 297 LIFPSLLGARMLGSTVFPWLISGPSSFRTED-CLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLR 375 (449)
Q Consensus 297 ~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~-~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~ 375 (449)
.++...++.+.+-.....+..++ ..+..+ .+......+.=......... ....+..+..+..++.....|..+.++
T Consensus 301 ~vl~~tGl~m~~~ql~~~~~l~~--~~~~~~a~l~~~l~~~vP~~llls~~~-~~~~l~~~s~l~sf~~A~~vt~Lt~Lv 377 (451)
T KOG2615|consen 301 KVLSTTGLLMLVIQLALVPILPR--YKGNIKAVLLFSLLLIVPAFLLLSLAR-TPVVLYLGSTLKSFSTASVVTCLTSLV 377 (451)
T ss_pred eeeehhhHHHHHHHHhccccccc--cccchhhHHHHHHHHHHHHHHHHhccc-cchhhhHHHHHHHHHHHHhhHHHHHHH
Confidence 66554444433222222222331 111111 11122111111111111111 222344566677788888889999999
Q ss_pred hccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhc
Q 013096 376 TMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNI 412 (449)
Q Consensus 376 ~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~ 412 (449)
.+..|+++||+++|+.++....+=..++++++....+
T Consensus 378 ~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 378 HKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 9999999999999999998888866677766665444
No 88
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.82 E-value=4.6e-16 Score=155.06 Aligned_cols=345 Identities=18% Similarity=0.141 Sum_probs=198.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhC-chHHHHHHHHHHHHHH
Q 013096 55 FQRNFLLLFSLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIG-QKKVCLIFFILHLFVG 133 (449)
Q Consensus 55 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~G-Rr~~ll~~~~~~~~~~ 133 (449)
.+.|.-..+++-.+..+...|+.+...++.|+|.+|+|.+.+...+...+..+++|.++||++ +||++.+..++.++..
T Consensus 3 ~~~rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~ 82 (400)
T PF03825_consen 3 LKFRLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALAL 82 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHH
Confidence 344455556666666667789887777899999999999999999999999999999999997 5666655555544433
Q ss_pred H-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHh--hcCChhhHHHHHHHHHHHhHHHHH-HHHHHHHHHhccc
Q 013096 134 V-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEK--QGQRQDILSDTFWLMTFFESAALI-GGQVLANWLVGID 209 (449)
Q Consensus 134 l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~--r~~~~~~l~~~~~~~~~~~~~~~i-~a~~lg~~l~~~~ 209 (449)
. ....++++.++..-++..+......|..++.-....++ +++++- |..+.... .++.. .+..+.+.. +.
T Consensus 83 ~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~YG~i---RlwGSiGf--~~~~~~~~~~~~~~~-~~- 155 (400)
T PF03825_consen 83 LLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKDYGRI---RLWGSIGF--IVAALAFGGLLGGYL-GI- 155 (400)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccCCCCcc---hhhhhHHH--HHHHHHHHHHHHhhh-cc-
Confidence 3 44567888888887777777665566656532221121 223322 23332221 11111 112222221 10
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhccccCCCCC--cch---hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 013096 210 VKKGVVPSSTASVFLSILGIICVSRGWTENPKMA--FDD---YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAP 284 (449)
Q Consensus 210 ~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~--~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 284 (449)
.+...++++.....++...... ..|+.++++ +++ ....+..+++|||+++.+.+...+.+.....+ ..+.+
T Consensus 156 --~~~~~~~~i~~~~~~ll~~~~l-~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~-~~f~~ 231 (400)
T PF03825_consen 156 --SGTSLIFYIAAILSLLLAGFAL-FLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAY-YTFFS 231 (400)
T ss_pred --ccccHHHHHHHHHHHHHHHHHH-hCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 1222345554433332222222 345544221 111 11122347899999887655544443322221 22345
Q ss_pred hhccC-C-C-ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHH----HH
Q 013096 285 TLVAD-G-R-EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVA----LF 357 (449)
Q Consensus 285 ~~~~~-~-~-~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~----~~ 357 (449)
.++++ + . ....|...+...++-+.--...+++.+ |++.++++.++....++=..+.++..++.+..+. ..
T Consensus 232 ~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~---r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q 308 (400)
T PF03825_consen 232 IYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLK---RFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQ 308 (400)
T ss_pred HHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 55554 3 2 233455555545555666677888888 7888888777665555433333343222222121 12
Q ss_pred HHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHH-HHHHHHHHHH-hHHhhhcc
Q 013096 358 CLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPA-NAAILLFLLL-RGFYRNIE 413 (449)
Q Consensus 358 ~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~-~~~~~~~~~~-g~~~~~~~ 413 (449)
.+.+...|....+...+..+..|+|.|+++.+++.... +++...+... |.+.+..+
T Consensus 309 ~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 309 LLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred hhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 34677788888899999999999999999999887654 3444444444 44455544
No 89
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.8e-19 Score=174.62 Aligned_cols=173 Identities=12% Similarity=0.049 Sum_probs=132.7
Q ss_pred HHHHHHHHhhhh----hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH
Q 013096 62 LFSLASVMEGLW----SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK 136 (449)
Q Consensus 62 ~~~l~~~~~~~~----~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~ 136 (449)
+..+....+.++ .-..+.+...+|++++..|++-....+..++++|++|.++|||.||.++.+|..+|+++.+ ++
T Consensus 37 il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~ 116 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASG 116 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHH
Confidence 334444444333 2234566678999999999999999999999999999999999999999999999999876 88
Q ss_pred HhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcch
Q 013096 137 SITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVP 216 (449)
Q Consensus 137 ~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~ 216 (449)
++..+|++.++|.+.|+|.+...|.+++ +++|. +++++.++.++...+....+..+|.+.|....+.. + .||+
T Consensus 117 fs~~Fwq~~l~R~~vGiGeAs~~~ia~s-~IaD~----f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~-~-~Wr~ 189 (493)
T KOG1330|consen 117 FSNHFWQVLLCRGFVGIGEASYSPIAPS-LIADS----FPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT-F-WWRW 189 (493)
T ss_pred HHHHHHHHHHHHHHhccchhhhcccchh-Hhhhc----CcchhhhHHHHHhhhhcccccceeEEeeeeeccCc-c-ceEE
Confidence 8899999999999999999998888765 55554 55566677777766665555555656666665554 2 3999
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCC
Q 013096 217 SSTASVFLSILGIICVSRGWTENPK 241 (449)
Q Consensus 217 ~f~~~~~~~~~~~~~i~~~~~e~~~ 241 (449)
.|...+++.+++.+++....+|+++
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCccc
Confidence 9998888877776666665666553
No 90
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.82 E-value=1.5e-18 Score=164.77 Aligned_cols=318 Identities=16% Similarity=0.100 Sum_probs=202.6
Q ss_pred HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhh
Q 013096 83 YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFN 161 (449)
Q Consensus 83 ~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~ 161 (449)
+.+-+++++|+++....+.+.+..|+.|.+.||+|+|-.++++..+...+++ .++..+++.++++|.+||+|.+...++
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 4566778999999999999999999999999999999999999998888776 888999999999999999999988777
Q ss_pred hHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccCCC
Q 013096 162 FETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPK 241 (449)
Q Consensus 162 ~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~ 241 (449)
..+ ++++.-+++ .+.+++++..-...+++.++||..|+.+-+.. |.+.||.+.+.+.++...+.+...+.++.
T Consensus 180 gla-mlAd~f~~d---~er~~vmGialgfislG~lvgPpfGGilYe~~---Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 180 GLA-MLADVFPED---NERGSVMGIALGFISLGVLVGPPFGGILYEFA---GKSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred hHH-HHHHHcccc---hhhhHHHHHHHHHHhccceecCCcccchHhhc---CCcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 655 444432222 23355666554455667788999999887765 88999998776666665554444443333
Q ss_pred CCcchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhcc---C---CCccchHHHHHHHHHHHHHhhhHHHH
Q 013096 242 MAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---D---GREVHLGLIFPSLLGARMLGSTVFPW 315 (449)
Q Consensus 242 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~---~~~~~~g~i~~~~~~~~~lg~~l~~~ 315 (449)
+++.+.+..+++++++||.++.........+.. ..+ .-|++-. + ..+.+.|..|....+...+|..+.+.
T Consensus 253 ~~~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~-laf---LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~ 328 (464)
T KOG3764|consen 253 DPDSTEQGTPMWSLLMDPYILLIAGAITFSNSS-LAF---LEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGK 328 (464)
T ss_pred CccccccCccHHHHHhCchHhhhhcchhhccch-HHH---hCcccHHHHHHhccCCCcceeeeecccccchhccCchHHH
Confidence 232233344588899999888755433222221 111 3454321 1 13446788887777889999999999
Q ss_pred HhcCCCCCCchhHHHH--HHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhh----hHHHHHHhccCCCc---chhH
Q 013096 316 LISGPSSFRTEDCLLY--AFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLIL----PSLARLRTMYVPNE---LRGG 386 (449)
Q Consensus 316 l~~~~~~~~~~~~l~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~----p~~~~~~~~~~p~~---~rg~ 386 (449)
+.+ |++..|++.. +.+..+.+....-+.+ +..-+++.-+..+++.++.. |....+. +.-.++ ..|.
T Consensus 329 la~---k~~~~~wl~~~~gl~~~G~~~~~iP~~~-~~~~L~vp~~~l~~~i~~~dasl~P~l~~lv-d~rh~s~~~vYGs 403 (464)
T KOG3764|consen 329 LAD---KYPHLRWLLSLGGLATVGVSSGPIPFAT-SIAQLWVPNFGLGFGIGLADASLIPTLGYLV-DPRHVSGFNVYGS 403 (464)
T ss_pred HHH---hcCchhHHHHHHHHHHHHHHhchhHhhh-hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhc-chhhccccceeee
Confidence 999 6665554432 2233333222211221 11112222222233333333 4433332 211222 5677
Q ss_pred HHHhhHHHHHHHHHHHHHHh-HHhhhcchhH
Q 013096 387 MISLSLAPANAAILLFLLLR-GFYRNIENAA 416 (449)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~ 416 (449)
++++......++-..++..| ...+.+|+..
T Consensus 404 VyaIad~a~sla~a~GP~~gg~iv~~iGF~w 434 (464)
T KOG3764|consen 404 VYAIADAAFSLAYAIGPTFGGSLVEAIGFEW 434 (464)
T ss_pred HHHHHHHHHHHhhhccccccchheeehhHHH
Confidence 88887777776655555554 4456677544
No 91
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.80 E-value=2.3e-16 Score=157.83 Aligned_cols=350 Identities=14% Similarity=0.117 Sum_probs=194.4
Q ss_pred HHhC--CChHHHHH----HHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH----HHHhcchhHHHHHHHHH
Q 013096 82 VYYG--VAKEQMML----LLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV----WKSITAHPSVWVANICL 151 (449)
Q Consensus 82 ~~~g--~s~~~ig~----l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l----~~~~~s~~~l~~~R~l~ 151 (449)
+++| .|+++... ..+..++++++++...|+++||+|||..++.+.++..++++ +..+++++.++++|++.
T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~ 126 (485)
T KOG0569|consen 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIV 126 (485)
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3556 56666553 45677789999999999999999999999988777666543 45678999999999999
Q ss_pred HhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHH-HHhcccccCCcchhHHHHHHHHHHHHH
Q 013096 152 SLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLAN-WLVGIDVKKGVVPSSTASVFLSILGII 230 (449)
Q Consensus 152 Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~-~l~~~~~~~g~~~~f~~~~~~~~~~~~ 230 (449)
|+..|...... ..++.|..+...++ ..-....++..++.+++..++. .+... ...|++.+....++.++..+
T Consensus 127 Gl~~gl~~~~~-pmyl~E~sP~~~RG----~~g~~~~~~~~~g~ll~~~~~l~~ilGt--~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 127 GLACGLSTGLV-PMYLTEISPKNLRG----ALGTLLQIGVVIGILLGQVLGLPSLLGT--EDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHhHHHHHHH-HHHHhhcChhhhcc----HHHHHHHHHHHHHHHHHHHHccHHhcCC--CcchHHHHHHHHHHHHHHHH
Confidence 99998766553 45777765433322 2222233333344444444332 12211 13566666666666666654
Q ss_pred HHHhccccCCCC------Cc---c-h-----------------------h-----hhhhhHhhhcChhHHHH---HH-HH
Q 013096 231 CVSRGWTENPKM------AF---D-D-----------------------Y-----RTSFFTYIFGDKRIWLL---VL-AQ 268 (449)
Q Consensus 231 ~i~~~~~e~~~~------~~---~-~-----------------------~-----~~~~~~~l~~~~~~~~~---~~-~~ 268 (449)
.. ...||+|+- ++ + + . ++.+++++++|++.+.- .+ +.
T Consensus 200 ~l-~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~ 278 (485)
T KOG0569|consen 200 LL-PFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVS 278 (485)
T ss_pred HH-hcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHH
Confidence 33 467998751 00 0 0 0 01146788888655432 21 11
Q ss_pred HHHHHHHHHHHHHhhhhhccC-CCc-cchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHh--
Q 013096 269 ACLQFSIALFWILWAPTLVAD-GRE-VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA-- 344 (449)
Q Consensus 269 ~~~~~~~~~~~~~~~p~~~~~-~~~-~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~-- 344 (449)
...+......+..+.-.++.+ |-+ .+.-+.....+....+.+..+.++.| |.|||..+..+..++.+...++.
T Consensus 279 ~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid---~~gRRpLll~~~~~~~~~~~~~~~~ 355 (485)
T KOG0569|consen 279 FAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLID---RLGRRPLLLISLSLMAVALLLMSIA 355 (485)
T ss_pred HHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 111111111111222222322 322 22233334445567788889999999 78888777766555443332221
Q ss_pred -cccchh--H---HHHHHHHHHHHHhhhh-hhHHHHHHhccCCCcchhHHHHhhHHHHHHHHH-HHHHHhHHhhhcchhH
Q 013096 345 -YDYQEI--G---ILVALFCLFHACVGLI-LPSLARLRTMYVPNELRGGMISLSLAPANAAIL-LFLLLRGFYRNIENAA 416 (449)
Q Consensus 345 -~~~~~~--~---~~~~~~~l~~~~~g~~-~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~ 416 (449)
...+.. + ..+...+++.+..++. .|...-..+|++|++.|.++.++......+... .+...-.+.+..|...
T Consensus 356 ~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~ 435 (485)
T KOG0569|consen 356 LFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYV 435 (485)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 111111 1 1223333444333332 477788889999999999998876655443221 1111011122344333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013096 417 MVAFAALGLFIAAGCMHVLKRWGKQP 442 (449)
Q Consensus 417 ~~~~~~~~~l~~~~~~~~~~~~~~~~ 442 (449)
.+.|.+...+..+..+..++|+|.+.
T Consensus 436 filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 436 FILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred hHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 34454444444555667778877543
No 92
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.79 E-value=1e-15 Score=151.38 Aligned_cols=331 Identities=12% Similarity=0.012 Sum_probs=208.8
Q ss_pred chhhhHHHHHHHHHHHHHhh--hhhHHHHHHHHHhCCChHH-HHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHH
Q 013096 52 FVPFQRNFLLLFSLASVMEG--LWSVFGEYELVYYGVAKEQ-MMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFIL 128 (449)
Q Consensus 52 ~~~~~~~~~~~~~l~~~~~~--~~~~~~~~l~~~~g~s~~~-ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~ 128 (449)
++.+++.-+.++..+.+-+. -.+...|.+.+++|+|++| .|.++++++.++++++++.|.++||+|-||++..+.+.
T Consensus 22 ~~~W~~~~~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~ 101 (511)
T TIGR00806 22 LKSWRVLVLYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALS 101 (511)
T ss_pred hcchhHHHHHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 35666666656655554442 1222345666799999999 99999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Q 013096 129 HLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVG 207 (449)
Q Consensus 129 ~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~ 207 (449)
+++.++ ..+++++..+.+.|++.|++.|... +... ++.. -+|+++.+++.+....+..++.++++++++++.
T Consensus 102 Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~s-yI~~----WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~- 174 (511)
T TIGR00806 102 FVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSS-YIFS----LVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV- 174 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 998776 7788899999999999999999877 4322 3333 367777888888888788888888999888843
Q ss_pred ccccCCcchhHHH---HHHHHHHHHHHHHhccccCCC----------------------C-Cc--ch--hh---------
Q 013096 208 IDVKKGVVPSSTA---SVFLSILGIICVSRGWTENPK----------------------M-AF--DD--YR--------- 248 (449)
Q Consensus 208 ~~~~~g~~~~f~~---~~~~~~~~~~~i~~~~~e~~~----------------------~-~~--~~--~~--------- 248 (449)
. +|||+-+.+ +.....+++++.+ .+|..++ + +. .+ .+
T Consensus 175 s---~gWr~y~~Ln~Isl~s~~~a~~~a~-~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (511)
T TIGR00806 175 T---LGWISYSTLNIISLVFMTFSVFLAL-FLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVR 250 (511)
T ss_pred h---cCchhHHHHHHHHHHHHHHHHHHHH-hCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHH
Confidence 3 378764443 3333333333332 2331111 0 00 00 00
Q ss_pred -hhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCC
Q 013096 249 -TSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFR 324 (449)
Q Consensus 249 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~ 324 (449)
...++...+||+++...+..++...+.+- +.++...+-.+ . .+.--|.+-+...+...+.++..|++-.++.+++
T Consensus 251 l~~~~~~~y~n~~vl~WSlWwa~a~~g~~q-v~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~ 329 (511)
T TIGR00806 251 MLSELVTIYRNPQLLLWSLWWVFNSAGYYL-ITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWS 329 (511)
T ss_pred HHHHHHHHhcCcchhhhhHHHHHHhhHHHH-HHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH
Confidence 12234456778877666655554433222 22222222211 1 1113355555555555667777887754221111
Q ss_pred chhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHH
Q 013096 325 TEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPAN 396 (449)
Q Consensus 325 ~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~ 396 (449)
+-.+.+..++-+..++++..+ +++++....++++.....+..+..+.-+++....|.-|-++|++.+..-
T Consensus 330 -~l~l~v~s~~~~gll~~m~~t-~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl 399 (511)
T TIGR00806 330 -KLLIAVVSAIQAGLVFWMSQS-HDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVAT 399 (511)
T ss_pred -HHHHHHHHHHHHHHhhhhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHH
Confidence 112222223333334444444 3677777888888888888888877777777777777888887765433
No 93
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.78 E-value=5.1e-18 Score=178.84 Aligned_cols=252 Identities=10% Similarity=0.007 Sum_probs=172.0
Q ss_pred hhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhc----------
Q 013096 71 GLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSIT---------- 139 (449)
Q Consensus 71 ~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~---------- 139 (449)
++..+.++.+.++|+++..+.|++.+.+.++..+++++.|+++||+||||.+.++.++++++++ .++.+
T Consensus 50 g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 50 GLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred HHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 4455666788889999999999999999999999999999999999999999999999988875 44432
Q ss_pred -----------------------------------------chhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChh
Q 013096 140 -----------------------------------------AHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQD 178 (449)
Q Consensus 140 -----------------------------------------s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~ 178 (449)
.+..++++|+++|+|.+...+...+ +++|. .+++
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~-~i~d~----~~~~ 204 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS-YIDDF----AKSK 204 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch-hhhcc----CCcc
Confidence 2456789999999999988777654 55555 3444
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccC-------------------CcchhHHHHHHHHHHHHHHHHhccccC
Q 013096 179 ILSDTFWLMTFFESAALIGGQVLANWLVGIDVKK-------------------GVVPSSTASVFLSILGIICVSRGWTEN 239 (449)
Q Consensus 179 ~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~-------------------g~~~~f~~~~~~~~~~~~~i~~~~~e~ 239 (449)
+.+..++.......+++.+|+++++++.+.+.+| +|+..|++.+++.++..+.+. .+||+
T Consensus 205 ~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~~p~~ 283 (633)
T TIGR00805 205 NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-FFPKA 283 (633)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-hCccc
Confidence 5566777777777778888888888877543111 256667765554444333222 23332
Q ss_pred CCC----Cc-----c-------h-----------hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccCC--
Q 013096 240 PKM----AF-----D-------D-----------YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG-- 290 (449)
Q Consensus 240 ~~~----~~-----~-------~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-- 290 (449)
.++ ++ + + .....++.+++||.++...+...+.....+.+ ..|.|.++++.
T Consensus 284 lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~-~~~lP~yl~~~~g 362 (633)
T TIGR00805 284 LPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGY-ITFLPKYLENQYG 362 (633)
T ss_pred cCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 211 00 0 0 00123567899999888777666655555544 55899988752
Q ss_pred -CccchHHHHHHHHH-HHHHhhhHHHHHhcCCCCCC--chhHHHHH
Q 013096 291 -REVHLGLIFPSLLG-ARMLGSTVFPWLISGPSSFR--TEDCLLYA 332 (449)
Q Consensus 291 -~~~~~g~i~~~~~~-~~~lg~~l~~~l~~~~~~~~--~~~~l~~~ 332 (449)
++...+.+.....+ +.++|..+.+++.| |++ .++.+..+
T Consensus 363 ~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~---r~~~~~~~~~~~~ 405 (633)
T TIGR00805 363 ISSAEANFLIGVVNLPAAGLGYLIGGFIMK---KFKLNVKKAAYFA 405 (633)
T ss_pred CcHHHHHHHhhhhhhhHHHHHHhhhhheee---eecccHHHHHHHH
Confidence 34456666655544 56789999999999 454 34444433
No 94
>PRK09669 putative symporter YagG; Provisional
Probab=99.78 E-value=1.1e-15 Score=155.51 Aligned_cols=317 Identities=15% Similarity=0.054 Sum_probs=168.7
Q ss_pred hHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhh----hCchHH-HHHHHHHHHHHHH-HHHhcc------
Q 013096 74 SVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDL----IGQKKV-CLIFFILHLFVGV-WKSITA------ 140 (449)
Q Consensus 74 ~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr----~GRr~~-ll~~~~~~~~~~l-~~~~~s------ 140 (449)
+.+++..| +++|+|+.++|.++.+.-+.-++..|+.|.++|| +||||. ++++.+..+++.. +...|+
T Consensus 29 ~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 29 MLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchH
Confidence 34444444 4799999999999999999999999999999999 888555 5566666666554 333332
Q ss_pred hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHH----HHHhHHHHHHHHHHHHHHhcccccCCcch
Q 013096 141 HPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLM----TFFESAALIGGQVLANWLVGIDVKKGVVP 216 (449)
Q Consensus 141 ~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~----~~~~~~~~i~a~~lg~~l~~~~~~~g~~~ 216 (449)
+..+++.-++.+.+.+.......+ +.+|.. ++. ++..+..+.- ..++.+++++++.+...+.+.....+|+.
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~a-l~~~~t-~~~--~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~ 184 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCA-MPGAIT-NDP--RERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFY 184 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHH-hHHHhc-CCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 345555666666655543333233 444432 221 2222222222 22222333323233333321000136666
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCCCC--cchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CCc
Q 013096 217 SSTASVFLSILGIICVSRGWTENPKMA--FDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--GRE 292 (449)
Q Consensus 217 ~f~~~~~~~~~~~~~i~~~~~e~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~ 292 (449)
.+.+..++..++.+...+..+|...++ ++...++.++.++|||+++.+.....+....... .....+.+.+. +.+
T Consensus 185 ~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~ 263 (444)
T PRK09669 185 AMMVMGLLGVVLFFCCFFMTKERYTPEVDNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVT-RGGATLYYVNYVLLRP 263 (444)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEecCCCCcCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HhhhhheeeeeecCCH
Confidence 665544444444333333445543221 1122345578899999887765443333222211 11122222222 122
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHH-HHhcccchhHHHHHHHHHHHHHhhhhhhHH
Q 013096 293 VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFS-IIAYDYQEIGILVALFCLFHACVGLILPSL 371 (449)
Q Consensus 293 ~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~ 371 (449)
...+.......++.+++..+.+++.+ |+++++....+..+..+... ......++.+..+...++.+++.+...+..
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~---r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 340 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLG---KFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQ 340 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233444445667788888999998 78877766655433332222 222222333334444556778888888888
Q ss_pred HHHHhccCCCcc-------hhHHHHhhHHHHHHH
Q 013096 372 ARLRTMYVPNEL-------RGGMISLSLAPANAA 398 (449)
Q Consensus 372 ~~~~~~~~p~~~-------rg~~~~~~~~~~~~~ 398 (449)
.++..|..|.++ .|..+|.......++
T Consensus 341 ~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg 374 (444)
T PRK09669 341 WSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLG 374 (444)
T ss_pred HHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHH
Confidence 888888876322 234556655544444
No 95
>PRK09848 glucuronide transporter; Provisional
Probab=99.77 E-value=1.6e-15 Score=154.53 Aligned_cols=319 Identities=11% Similarity=0.052 Sum_probs=173.1
Q ss_pred hhhhHHHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh----CchHHH-HHHHHHHHHHHHHHH------h
Q 013096 71 GLWSVFGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI----GQKKVC-LIFFILHLFVGVWKS------I 138 (449)
Q Consensus 71 ~~~~~~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~----GRr~~l-l~~~~~~~~~~l~~~------~ 138 (449)
++..++++..++ +.|+++.++|.+.+...+..++..|+.|.++||. ||||.. +++.+...+.+...+ .
T Consensus 25 ~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (448)
T PRK09848 25 AMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWS 104 (448)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 344566654444 5799999999999999999999999999999996 888865 445444444333211 1
Q ss_pred cc--hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHH----H-HhHHHHHHHHHHHHHHhccccc
Q 013096 139 TA--HPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMT----F-FESAALIGGQVLANWLVGIDVK 211 (449)
Q Consensus 139 ~s--~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~----~-~~~~~~i~a~~lg~~l~~~~~~ 211 (449)
++ ....++.-++.+++.+...+...++ ..+.. ++. ++..+..+.-. . ....+..++|.++....... .
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al-~~~~~-~~~--~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~-~ 179 (448)
T PRK09848 105 HSSKVVYAYLTYMGLGLCYSLVNIPYGSL-ATAMT-QQP--QSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEM-V 179 (448)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccHhhh-hhhhc-CCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch-h
Confidence 11 2223444566677776655444442 23321 221 11112211111 1 11223344555554321110 0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhccccCCCCCc-chhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-
Q 013096 212 KGVVPSSTASVFLSILGIICVSRGWTENPKMAF-DDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD- 289 (449)
Q Consensus 212 ~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~- 289 (449)
.+|.....+..++..+..++..+..||+.++++ +...++.++.+++||+++...+...+.......+ ..+.|.+.++
T Consensus 180 ~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 258 (448)
T PRK09848 180 SVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAV-SASSLFYVRYV 258 (448)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-hhhheeeEeee
Confidence 011111111122222222333344566543321 1222345788999999887766555554443333 3346666654
Q ss_pred -CCccchHHH-HHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHhhh
Q 013096 290 -GREVHLGLI-FPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY-QEIGILVALFCLFHACVGL 366 (449)
Q Consensus 290 -~~~~~~g~i-~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~l~~~~~g~ 366 (449)
+.+...+.+ .....++.+++..+.+++.+ |+++++.+..+..+..++.....+.+ ++.+.......+.+++.++
T Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~ 335 (448)
T PRK09848 259 LNDTGLFTVLVLVQNLVGTVASAPLVPGMVA---RIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGV 335 (448)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 222223333 33334567788899999998 78888877766555444433333322 2333334445566778888
Q ss_pred hhhHHHHHHhccCCCc-------chhHHHHhhHHHHHHH
Q 013096 367 ILPSLARLRTMYVPNE-------LRGGMISLSLAPANAA 398 (449)
Q Consensus 367 ~~p~~~~~~~~~~p~~-------~rg~~~~~~~~~~~~~ 398 (449)
..+...++.++..|.+ .+|..+|+.+....++
T Consensus 336 ~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 336 TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 8888888888877654 3477777776655554
No 96
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.77 E-value=4.4e-16 Score=157.67 Aligned_cols=231 Identities=14% Similarity=0.059 Sum_probs=171.1
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHH-HHHHhcchhHHHHHHHHHHhHHHHhhh
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVG-VWKSITAHPSVWVANICLSLASSIFSF 160 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~-l~~~~~s~~~l~~~R~l~Glg~~~~~~ 160 (449)
+|.+....|.+.+-+++++++.++++++|.|.||++-.+.+....+.+++.+ +....+|++.+++.|++.|+..+..+|
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP 153 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWP 153 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccch
Confidence 5677778889999999999999999999999999998888888888877655 455589999999999999999999998
Q ss_pred hhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc---ccCCcchhHHHHHHHHHHHHHHHHhccc
Q 013096 161 NFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID---VKKGVVPSSTASVFLSILGIICVSRGWT 237 (449)
Q Consensus 161 ~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~---~~~g~~~~f~~~~~~~~~~~~~i~~~~~ 237 (449)
.... ++. +-+++++++..++.+...++++.+.|++++..+.... ...|||+.|++-.++.++..+++++.+|
T Consensus 154 ~~~~-~lg----~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 154 GVVA-ILG----NWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred HHHH-HHH----hhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 8654 333 2356667777888877777777788888777643211 1248999999877666665555666667
Q ss_pred cCCCC------Ccc-----h------------hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccCC---C
Q 013096 238 ENPKM------AFD-----D------------YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG---R 291 (449)
Q Consensus 238 e~~~~------~~~-----~------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~ 291 (449)
+++.+ +++ + .++..+++.++|++++.+.+..++.....+.+ .+|+|.++.++ +
T Consensus 229 ~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~-~~~lpl~l~~~~~~s 307 (495)
T KOG2533|consen 229 DNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGF-SYWLPLYLKSNGGYS 307 (495)
T ss_pred CChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccH-HHHHHHHHHcCCCcC
Confidence 66541 110 0 11234678899999999988887777665554 66899998762 2
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhc
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLIS 318 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~ 318 (449)
..+...+-....++.++|..+++.++|
T Consensus 308 ~~~a~~ls~~~~~~g~v~~i~ag~lsd 334 (495)
T KOG2533|consen 308 ELQANLLSTPYDVGGIVGLILAGYLSD 334 (495)
T ss_pred hHHhccccchHHhhhHHHHHHHHHHHH
Confidence 334444445556778889999999999
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.76 E-value=4.8e-15 Score=149.83 Aligned_cols=364 Identities=11% Similarity=0.083 Sum_probs=197.1
Q ss_pred HHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhh----hhCchHHHHHHHHHHHH-HHH-HHHhcch
Q 013096 68 VMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISD----LIGQKKVCLIFFILHLF-VGV-WKSITAH 141 (449)
Q Consensus 68 ~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laD----r~GRr~~ll~~~~~~~~-~~l-~~~~~s~ 141 (449)
+...++.++++++.+++|.++.+++.+..++.+...+.+|+.|.++| |+||||.++....+..+ +.+ ..+++++
T Consensus 18 ~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~ 97 (477)
T TIGR01301 18 FGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADI 97 (477)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchh
Confidence 44456778887877899999999999999999999999999999999 59999999876444433 333 4455554
Q ss_pred hHHH------------HHHHHHHh-----HHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 013096 142 PSVW------------VANICLSL-----ASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANW 204 (449)
Q Consensus 142 ~~l~------------~~R~l~Gl-----g~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~ 204 (449)
..++ +.+.+.|+ +.....+...+ ++.|..+.+ +++...+++..+...+++.++++.+|+.
T Consensus 98 ~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rA-LiaDl~p~~--~~~~~~a~~~~~~~~~lG~ilg~~~g~~ 174 (477)
T TIGR01301 98 GHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRA-FLADLTGGD--ARRTRIANAYFSFFMAIGNVLGYAAGAY 174 (477)
T ss_pred hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3221 12333333 44433333333 444432211 1123345666566666777788887775
Q ss_pred H--hcccc----------cCCcchhHHHHHHHHHHHHHHHHhccccCCCC-Cc----c------h-hhhhhhHhhhcC--
Q 013096 205 L--VGIDV----------KKGVVPSSTASVFLSILGIICVSRGWTENPKM-AF----D------D-YRTSFFTYIFGD-- 258 (449)
Q Consensus 205 l--~~~~~----------~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~-~~----~------~-~~~~~~~~l~~~-- 258 (449)
. .+..+ ..+.+..|.++++..+++.++.....||.+.. ++ + + ..+..+++++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 254 (477)
T TIGR01301 175 SGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFK 254 (477)
T ss_pred HhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHH
Confidence 4 11100 12557789888887777766666667776531 10 0 0 011223343332
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHhhhhhccC---CC---cc------chHHH-HHHHHHHHHHhhhHHHHHhcCCCC
Q 013096 259 ---KRIWLLVLAQACLQFSIALFWILWAPTLVAD---GR---EV------HLGLI-FPSLLGARMLGSTVFPWLISGPSS 322 (449)
Q Consensus 259 ---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~---~~------~~g~i-~~~~~~~~~lg~~l~~~l~~~~~~ 322 (449)
|..+.+.+++++.-.+.+.+..+.++.+-++ ++ +. ..|-. ...+.+...+.+.+.+++.+ +
T Consensus 255 ~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~---~ 331 (477)
T TIGR01301 255 YLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCR---G 331 (477)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 4556677777766656665554444433221 11 10 11211 12223333455667777777 6
Q ss_pred CCc-hhHHHHHHHHHHHHHHHHhcccc-----------------h---hHHHHHHHHHHHHHhhhhhhHHHHHHhccCCC
Q 013096 323 FRT-EDCLLYAFVVLGFVFSIIAYDYQ-----------------E---IGILVALFCLFHACVGLILPSLARLRTMYVPN 381 (449)
Q Consensus 323 ~~~-~~~l~~~~~~~~~~l~~~~~~~~-----------------~---~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~ 381 (449)
++. ++....+.++.++++....+... + .+..+..+.+.|+..+..+..=.++.++..|+
T Consensus 332 ~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 332 WGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN 411 (477)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence 764 34434554455554443321110 0 12334455555655555555556777888885
Q ss_pred c--chhHHHHhhHHHHHHHHH-HHHHHhHHhhhcc--hhHHHHHHHHHHHHHHH-HHHHHHH
Q 013096 382 E--LRGGMISLSLAPANAAIL-LFLLLRGFYRNIE--NAAMVAFAALGLFIAAG-CMHVLKR 437 (449)
Q Consensus 382 ~--~rg~~~~~~~~~~~~~~~-~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~~-~~~~~~~ 437 (449)
+ ..|..+|+.++...+.-+ ..+..|.+.+-.+ ....+.++.+..+++.. +...++|
T Consensus 412 ~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 412 LGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 4 447888988876665422 2222233222222 33344455444444433 3333444
No 98
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.76 E-value=6.3e-16 Score=157.97 Aligned_cols=317 Identities=9% Similarity=-0.065 Sum_probs=188.6
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhC-----chHHHHHHHHHHH-HHHH-HHHhcchhHH-HHHHH
Q 013096 78 EYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIG-----QKKVCLIFFILHL-FVGV-WKSITAHPSV-WVANI 149 (449)
Q Consensus 78 ~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~G-----Rr~~ll~~~~~~~-~~~l-~~~~~s~~~l-~~~R~ 149 (449)
+.+.+++|+|+++++...+...++..+ .+++|+++||++ ||+.++++.++.+ +... .+..++.... .+.++
T Consensus 50 ~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 128 (468)
T TIGR00788 50 PMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIF 128 (468)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 444557899999999888888888877 667999999998 7777777766653 2221 2223444334 44788
Q ss_pred HHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHH
Q 013096 150 CLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGI 229 (449)
Q Consensus 150 l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~ 229 (449)
+.+++.+..-.+.++.++.... + +++..+...+........+.++++.+++.+.+.. +|+..|.+.+.+.++..
T Consensus 129 l~~~~~a~~dv~~da~~~e~~~--~-~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~---~~~~~f~~~a~l~ll~~ 202 (468)
T TIGR00788 129 LAALAKALYDVLVDSLYSERIR--E-SPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT---LTRILFLITAALLLLQL 202 (468)
T ss_pred HHHHHHHHHHHhHHHHHhhhhh--c-CCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc---CcchHHHHHHHHHHHHH
Confidence 9999988877777775543322 1 1122222222111112345667778888877654 89999988666555543
Q ss_pred HHHHhccccCCC---CC-cch--------------hhh---hhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhh-c
Q 013096 230 ICVSRGWTENPK---MA-FDD--------------YRT---SFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTL-V 287 (449)
Q Consensus 230 ~~i~~~~~e~~~---~~-~~~--------------~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~ 287 (449)
+ ....++|++. ++ .++ ..+ ...+..+++|+++...+...+.+...... -.+.+ .
T Consensus 203 ~-~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~---~~~~f~~ 278 (468)
T TIGR00788 203 F-VSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGA---SGSVFCA 278 (468)
T ss_pred H-HHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCC---CceeEEE
Confidence 3 3334677531 11 000 011 12444567777665333222210000000 01111 1
Q ss_pred -cC---CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcc---c------chhHHHH
Q 013096 288 -AD---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYD---Y------QEIGILV 354 (449)
Q Consensus 288 -~~---~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~---~------~~~~~~~ 354 (449)
.+ .++...|......+++.++|..+.+++.+ |++.++.+..+.++.+++....... . ...+...
T Consensus 279 ~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~---~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~ 355 (468)
T TIGR00788 279 TTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLK---TFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVL 355 (468)
T ss_pred EcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHh---hCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeee
Confidence 11 24566888888888899999999999987 7888887776655544433211100 0 1111122
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHH
Q 013096 355 ALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGF 408 (449)
Q Consensus 355 ~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~ 408 (449)
....+.+++.++.+.....+.++..|++.+|+.+++..+..+++...+...|++
T Consensus 356 ~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~ 409 (468)
T TIGR00788 356 GDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVL 409 (468)
T ss_pred ehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHH
Confidence 233445667777777778889999999999999999988888875555554443
No 99
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.76 E-value=1.6e-15 Score=157.51 Aligned_cols=340 Identities=14% Similarity=0.021 Sum_probs=190.0
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhh
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSF 160 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~ 160 (449)
+.+..+........+.++++.+++..++|+++||+|||++++++.++..+..+ +++++|++.+.+.|+++|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 45566677777788889999999999999999999999999999999998776 89999999999999999999987666
Q ss_pred hhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccCC
Q 013096 161 NFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENP 240 (449)
Q Consensus 161 ~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~ 240 (449)
+... ++.|.. ++++.+.+... ......++..++..++++.+ +||+.+++......+.+++ +...||++
T Consensus 191 ~~~~-~~~E~~----~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-----~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 191 VGFG-LVAEIV----SPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-----DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred HhHh-hheeec----CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 6433 344542 22233333333 22333445667777777765 7899999877666655443 33445765
Q ss_pred CC------C-c-----ch--------hh------h---------------hhhHhhhcChhHHHHHHHHHHHHHHHHHHH
Q 013096 241 KM------A-F-----DD--------YR------T---------------SFFTYIFGDKRIWLLVLAQACLQFSIALFW 279 (449)
Q Consensus 241 ~~------~-~-----~~--------~~------~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 279 (449)
+- . + ++ .. . ..+..+++.++.....+... +....+...
T Consensus 259 rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~-~~~~~~~~~ 337 (521)
T KOG0255|consen 259 RWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLL-FIWFVFSLV 337 (521)
T ss_pred HHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHH-HHHHHHhHH
Confidence 31 0 0 00 00 0 01122333332222111111 111111110
Q ss_pred HHhhhhhccCCCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhH--HHHHHH
Q 013096 280 ILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIG--ILVALF 357 (449)
Q Consensus 280 ~~~~p~~~~~~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~--~~~~~~ 357 (449)
..-.+... .+.+......+...+.....+....+...+ +++++.....+..+.+++++.......... ......
T Consensus 338 y~gl~~~~-~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~---~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
T KOG0255|consen 338 YYGLSLNV-SGLGGNIYLNFTLSGLVELPAYFRNGLLLP---EFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILP 413 (521)
T ss_pred HHhhhhhh-hhcCchHHHHHHHHHHHHhhHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence 00011111 111222333333333333444455566777 566666666665565655554443322111 222222
Q ss_pred HHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhc--chhHHHHHHHHHHHHHHHHHHHH
Q 013096 358 CLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNI--ENAAMVAFAALGLFIAAGCMHVL 435 (449)
Q Consensus 358 ~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~ 435 (449)
.+..++.+..+.....+..|++|+..|..+.+.......++.+.++..-.+.... ..+... ++..+.+....+..++
T Consensus 414 ~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~l 492 (521)
T KOG0255|consen 414 LLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL-FGWLALLLGLLSLLLL 492 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH-HHHHHHHHHHHHHhcC
Confidence 3334455555556677788999999999998887776666544443322122121 122222 4555555555554555
Q ss_pred HHhh
Q 013096 436 KRWG 439 (449)
Q Consensus 436 ~~~~ 439 (449)
++.+
T Consensus 493 pet~ 496 (521)
T KOG0255|consen 493 PETK 496 (521)
T ss_pred cccC
Confidence 5544
No 100
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.75 E-value=1.5e-15 Score=157.21 Aligned_cols=296 Identities=18% Similarity=0.140 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHH
Q 013096 90 QMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAI 168 (449)
Q Consensus 90 ~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~ 168 (449)
+.+++.+...++..+++++.|+++|++|||+.++.+.+++.++.+ ++.++|+++++++|+++|+|.|...... ..+++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~-piy~s 168 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLA-PVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcc-hhhHh
Confidence 457888999999999999999999999999999999999999886 8899999999999999999999866443 34677
Q ss_pred HHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccCCCC--C---
Q 013096 169 EHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM--A--- 243 (449)
Q Consensus 169 ~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~--~--- 243 (449)
|..+... .+...+..+.....+..++ .+.+...+.. .++||.++.+..+..++..+. ....||+++. +
T Consensus 169 Eiap~~~----RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~-~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~ 241 (513)
T KOG0254|consen 169 EIAPAHI----RGTLVSLYQLFITIGILLG-YCINYGTSKV-YAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGR 241 (513)
T ss_pred hcCChhh----hHHHHHHHHHHHHHHHHHH-HHHhhhhccC-CccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCC
Confidence 7643322 2223333333322333333 2333333221 148998888877666655544 4456787642 0
Q ss_pred -c--ch--------------hh----h------------h-hhHhhhc--ChhHHH-HHHHHHHHHHHHHHHHHHhhhhh
Q 013096 244 -F--DD--------------YR----T------------S-FFTYIFG--DKRIWL-LVLAQACLQFSIALFWILWAPTL 286 (449)
Q Consensus 244 -~--~~--------------~~----~------------~-~~~~l~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~ 286 (449)
+ ++ .. + + .++++++ .++... ....+.+.+...+..+..+.+.+
T Consensus 242 ~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~i 321 (513)
T KOG0254|consen 242 LEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTI 321 (513)
T ss_pred hHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHH
Confidence 0 00 00 0 0 0122222 111111 12223333333333334456666
Q ss_pred ccC-CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhc--cc--c-------hhHHHH
Q 013096 287 VAD-GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAY--DY--Q-------EIGILV 354 (449)
Q Consensus 287 ~~~-~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~--~~--~-------~~~~~~ 354 (449)
++. +.+.+.........+...++..+...+.| |+++|+.+..+...+.+++.+... .. . ..+..+
T Consensus 322 f~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd---~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (513)
T KOG0254|consen 322 FKSAGLKSDTFLASIILGVVNFLGTLVATYLVD---RFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAI 398 (513)
T ss_pred HHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHH
Confidence 553 22211111122233445667777788999 788888777666555544433221 10 0 111222
Q ss_pred HHHHHHHHHhhh-hhhHHHHHHhccCCCcchhHHHHhhHHHHH
Q 013096 355 ALFCLFHACVGL-ILPSLARLRTMYVPNELRGGMISLSLAPAN 396 (449)
Q Consensus 355 ~~~~l~~~~~g~-~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~ 396 (449)
...+++...... ..|.-+.+.+|.+|.+.|+++.++......
T Consensus 399 ~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~ 441 (513)
T KOG0254|consen 399 VFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNW 441 (513)
T ss_pred HHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHH
Confidence 222333222222 235555677999999999998877654433
No 101
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.74 E-value=4.5e-15 Score=151.68 Aligned_cols=347 Identities=12% Similarity=0.100 Sum_probs=223.5
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHH-HHHHHh
Q 013096 76 FGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVA-NICLSL 153 (449)
Q Consensus 76 ~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~-R~l~Gl 153 (449)
+.+.+.++++.+.+|++++.++......+.+|+.+.+.||+|.|++.+.+.++..++.+ ..+++++|++++. -++.|+
T Consensus 68 ~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~ 147 (509)
T KOG2504|consen 68 LFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGL 147 (509)
T ss_pred hHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhc
Confidence 44566679999999999999999989999999999999999999999999999999887 8889999888766 488889
Q ss_pred HHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHH
Q 013096 154 ASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVS 233 (449)
Q Consensus 154 g~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~ 233 (449)
|.|..+..... ++... -+++.+.+.+....+.+++.++=|.+..++.+.+ |||..+++-..+.+-+.....
T Consensus 148 G~~~~~~paiv-iv~~Y-----F~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~---G~r~~~l~~~~~~l~~~~~~~ 218 (509)
T KOG2504|consen 148 GLGLIYLPAVV-ILGTY-----FEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY---GWRGALLIFGGISLNVLVAGA 218 (509)
T ss_pred cchhhhcchhh-hhhhH-----hHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh---CcHHHHHHHHHHHHHHHHHHH
Confidence 98876654322 33322 2233455666666677777777777888888876 899888865444333322222
Q ss_pred hccc--------------------cCC---------CC---Ccc------------h--h----hhhhh----HhhhcCh
Q 013096 234 RGWT--------------------ENP---------KM---AFD------------D--Y----RTSFF----TYIFGDK 259 (449)
Q Consensus 234 ~~~~--------------------e~~---------~~---~~~------------~--~----~~~~~----~~l~~~~ 259 (449)
..-| |.. .+ ..+ + . .+... .++++||
T Consensus 219 ~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~ 298 (509)
T KOG2504|consen 219 LLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDP 298 (509)
T ss_pred HcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCc
Confidence 2222 000 00 000 0 0 01112 3678888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchh--HHHHHHHH
Q 013096 260 RIWLLVLAQACLQFSIALFWILWAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED--CLLYAFVV 335 (449)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~--~l~~~~~~ 335 (449)
.++.+.+...+.....+.. ...+|.+..+ + ++.+.+...+..++..++|.++.|++.|+ ...++ ...++.++
T Consensus 299 ~fl~~~~~~~~~~~g~~~p-~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~---~~~~~~~~~~~~ll~ 374 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVP-FVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK---PGIRALVLFLLTLLI 374 (509)
T ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc---cccchHHHHHHHHHH
Confidence 8888777665555544443 3346666543 3 44556777788888999999999999994 33222 22334444
Q ss_pred HHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHH-HHHHHhHHhhhcc-
Q 013096 336 LGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAIL-LFLLLRGFYRNIE- 413 (449)
Q Consensus 336 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~-~~~~~g~~~~~~~- 413 (449)
.++......... +.+.++...++++++.|...........+..+.|.-..++|+......++.+ ++++.|.+.+..+
T Consensus 375 ~gl~~~~~p~~~-~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~ 453 (509)
T KOG2504|consen 375 AGLARLFLPFAT-TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGN 453 (509)
T ss_pred HHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCC
Confidence 454443333332 2233344445567777766655556778899999888999998888777654 4455565555544
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 013096 414 NAAMVAFAALGLFIAAGCMHVLK 436 (449)
Q Consensus 414 ~~~~~~~~~~~~l~~~~~~~~~~ 436 (449)
+...+.++.+..+++..++...+
T Consensus 454 Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 454 YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeehhhcChHHHHHHHHHHHhH
Confidence 55555555555554444444333
No 102
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.69 E-value=3.2e-16 Score=151.55 Aligned_cols=302 Identities=15% Similarity=0.110 Sum_probs=163.5
Q ss_pred CChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh-----c--chhHHHHHHHHHHhHHHH
Q 013096 86 VAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI-----T--AHPSVWVANICLSLASSI 157 (449)
Q Consensus 86 ~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~-----~--s~~~l~~~R~l~Glg~~~ 157 (449)
.++.--+.+..+.+++..++|+++|+++||+|||+++...+++..++++ |++. + -..+|...|++.|+|.|.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 3444456778888899999999999999999999999999999888775 5543 1 257899999999999999
Q ss_pred hhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccc--------cCCcchhHHHHHHHHHHHH
Q 013096 158 FSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDV--------KKGVVPSSTASVFLSILGI 229 (449)
Q Consensus 158 ~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~--------~~g~~~~f~~~~~~~~~~~ 229 (449)
.+|...+ ..+|......++..++..++.-..+...+.+++-++..-.-.... +.=||..|.+++++.++++
T Consensus 161 DYPlSAt-I~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l 239 (538)
T KOG0252|consen 161 DYPLSAT-IMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL 239 (538)
T ss_pred CCcchHH-HhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999754 556663322233333434443333332333333333322211110 1238888888888776653
Q ss_pred HHHHhccccCCCCC-----c-----chhh--------------------hhh---hHhhhcC---hhHHHHHHHHHHHHH
Q 013096 230 ICVSRGWTENPKMA-----F-----DDYR--------------------TSF---FTYIFGD---KRIWLLVLAQACLQF 273 (449)
Q Consensus 230 ~~i~~~~~e~~~~~-----~-----~~~~--------------------~~~---~~~l~~~---~~~~~~~~~~~~~~~ 273 (449)
..+..+||+++-+ + ++.+ ++. +...+.. ++.+..+..+++...
T Consensus 240 -y~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDi 318 (538)
T KOG0252|consen 240 -YFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDI 318 (538)
T ss_pred -HhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3344678875311 0 0000 000 1111111 222223333333333
Q ss_pred HHHHHHHHhhhhhccC-C---Cccch------HHHHHHHH-HHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHH
Q 013096 274 SIALFWILWAPTLVAD-G---REVHL------GLIFPSLL-GARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI 342 (449)
Q Consensus 274 ~~~~~~~~~~p~~~~~-~---~~~~~------g~i~~~~~-~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~ 342 (449)
+.|.. .+.+..++++ + ..... ........ .+.+.|.++...+.| +.+++.+...++.++.+..++
T Consensus 319 afy~~-nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id---~iGRk~iq~~GF~~~~i~~~~ 394 (538)
T KOG0252|consen 319 AFYGQ-NLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFID---IIGRKYIQLMGFFIMTIFFFV 394 (538)
T ss_pred hhhcc-ccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEee---hhhhHHHHHhhHHHHHHHHHH
Confidence 33322 1112222221 1 01111 00001111 223346667777888 788888888888888777766
Q ss_pred Hhcccch---hHHHHHHHHHHHHHhhhhhhHHH--HHHhccCCCcchhHHHHhhHHH
Q 013096 343 IAYDYQE---IGILVALFCLFHACVGLILPSLA--RLRTMYVPNELRGGMISLSLAP 394 (449)
Q Consensus 343 ~~~~~~~---~~~~~~~~~l~~~~~g~~~p~~~--~~~~~~~p~~~rg~~~~~~~~~ 394 (449)
.+..++. ....++...+..+ .+-.-|+.+ ...+|.+|++.||+..|+.-..
T Consensus 395 ~~~~y~~~~~~~Gf~v~y~l~~f-f~NFGPn~ttfivpaE~FParvR~t~hGIsAA~ 450 (538)
T KOG0252|consen 395 IAGPYNQLENTIGFVVLYSLTFF-FGNFGPNATTFIVPAEIFPARVRSTCHGISAAS 450 (538)
T ss_pred HcCCcccccccCceeehHHHHHH-HHhcCCCceeEEeehhhchHHHhhhhhhHHHHh
Confidence 6654431 1111111111111 111223332 3447999999999998876543
No 103
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.69 E-value=9.1e-14 Score=142.73 Aligned_cols=306 Identities=15% Similarity=0.122 Sum_probs=173.3
Q ss_pred hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHH
Q 013096 74 SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLS 152 (449)
Q Consensus 74 ~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~G 152 (449)
...++.+++|.|-++ ...++.....++..+..|+.|+++|.+|||.+++.+.++..++++ ++-++|...++.+-.+.|
T Consensus 64 a~~l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G 142 (599)
T PF06609_consen 64 ASILPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH
Confidence 345678889999764 446677777788888899999999999999999999999999987 889999999999999999
Q ss_pred hHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHH
Q 013096 153 LASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICV 232 (449)
Q Consensus 153 lg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i 232 (449)
+|.|..... ...++|..++..+ .................+|.++..+..+ .+|||.|++.++...++.+..
T Consensus 143 vgaG~~~~~--~~~isEl~p~k~R----~~~~~~~~~~~i~~~~~~~~ia~~~~~~---~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 143 VGAGVQELA--ALAISELVPNKWR----GLGLAIASIPFIITTWISPLIAQLFAAH---SGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HhhHHHHHH--HHHHHHhcccchh----hhHhHHHHHHHHhhhcccHHHHHHhccC---CCcchHHHHHHHHHHHHHHHH
Confidence 998866533 2345666433221 1112222211111222456666665543 389999998766544443322
Q ss_pred H-hccccCC----CC--Ccch-------------------------------h------------------------h--
Q 013096 233 S-RGWTENP----KM--AFDD-------------------------------Y------------------------R-- 248 (449)
Q Consensus 233 ~-~~~~e~~----~~--~~~~-------------------------------~------------------------~-- 248 (449)
. +..|+++ ++ ++++ + +
T Consensus 214 ~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~ 293 (599)
T PF06609_consen 214 FFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWF 293 (599)
T ss_pred HHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhh
Confidence 2 2223221 11 1110 0 0
Q ss_pred ---hhhh--HhhhcChhHHHHHHHHHHHHHHHH-HHHHHhhhhhcc-CC-Cc---cchHHHHHHHHHHHHHhhhHHHHHh
Q 013096 249 ---TSFF--TYIFGDKRIWLLVLAQACLQFSIA-LFWILWAPTLVA-DG-RE---VHLGLIFPSLLGARMLGSTVFPWLI 317 (449)
Q Consensus 249 ---~~~~--~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~-~~-~~---~~~g~i~~~~~~~~~lg~~l~~~l~ 317 (449)
++++ .+++||+|.+...++..+..+..| .....|...... .+ +. ...++.......+...|+.+.+.+.
T Consensus 294 ~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~ 373 (599)
T PF06609_consen 294 GAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLF 373 (599)
T ss_pred ccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHH
Confidence 0111 346676555544433333333333 222334332221 11 11 1345555555667778888888877
Q ss_pred cCCCCCCchhHH-HHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhH
Q 013096 318 SGPSSFRTEDCL-LYAFVVLGFVFSII-AYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSL 392 (449)
Q Consensus 318 ~~~~~~~~~~~l-~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~ 392 (449)
. +.++.|.. .++...+.+....+ ....++....+...++.+++.|..........+-..|+|+-|++.|+..
T Consensus 374 ~---~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~ 447 (599)
T PF06609_consen 374 S---KIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTG 447 (599)
T ss_pred H---HccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHH
Confidence 6 34443433 33333222211111 2222222222333334566676665555556667789999888876543
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.68 E-value=1.4e-14 Score=146.80 Aligned_cols=313 Identities=15% Similarity=0.113 Sum_probs=179.6
Q ss_pred HHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhh----hhCchHHHH-HHHHHHHHHHH-HHHh-c-------c
Q 013096 76 FGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISD----LIGQKKVCL-IFFILHLFVGV-WKSI-T-------A 140 (449)
Q Consensus 76 ~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laD----r~GRr~~ll-~~~~~~~~~~l-~~~~-~-------s 140 (449)
++...|. ..|+++..+|.+..++-+..++..|+.|.++| |+||||..+ ++.+..+++.. +... | .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4444454 56999999999999999999999999999999 899888865 56666666654 3222 2 2
Q ss_pred hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccc---c-CCcch
Q 013096 141 HPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDV---K-KGVVP 216 (449)
Q Consensus 141 ~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~---~-~g~~~ 216 (449)
...+.+.-++..++.........+ +.+|.. ++ .++..+..+.-.....++.++...+...+.+... . .+|++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~a-l~~~lt-~~--~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~ 178 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNA-LIPELT-PD--PDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRW 178 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhh-cCcccc-cc--HhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHH
Confidence 233455555556665544333233 223321 11 1122233333222222223222333333322221 1 15777
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCCC-C-c--chhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C
Q 013096 217 SSTASVFLSILGIICVSRGWTENPKM-A-F--DDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G 290 (449)
Q Consensus 217 ~f~~~~~~~~~~~~~i~~~~~e~~~~-~-~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~ 290 (449)
...+.+++..++.++..+..||.+++ + + +...++.++.+++||+++.+.....+........ ....+.+.++ +
T Consensus 179 ~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~-~~~~~y~~~~vl~ 257 (428)
T PF13347_consen 179 MALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALM-NTFLPYYFTYVLG 257 (428)
T ss_pred HHHHHHHHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHhc
Confidence 77666666555555555566772222 1 1 1122355788999998887665554433322211 1122333332 2
Q ss_pred CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHhhhhhh
Q 013096 291 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY-QEIGILVALFCLFHACVGLILP 369 (449)
Q Consensus 291 ~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~l~~~~~g~~~p 369 (449)
++...+.......++.+++..+.+++.+ |++++|....+..+.+++.....+.+ .+.+...+..++.+++.+..++
T Consensus 258 ~~~~~~~~~~~~~~~~~v~~~~~~~l~~---r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~ 334 (428)
T PF13347_consen 258 NEGLISIFMLIFFVASIVGSPLWGRLSK---RFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFV 334 (428)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHH---HccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccccc
Confidence 3334555556667788899999999999 78888877766655555444333332 3444555566677888888888
Q ss_pred HHHHHHhccCCCc-------chhHHHHhhHHHHH
Q 013096 370 SLARLRTMYVPNE-------LRGGMISLSLAPAN 396 (449)
Q Consensus 370 ~~~~~~~~~~p~~-------~rg~~~~~~~~~~~ 396 (449)
...++.+|..+.+ ..|..+|.......
T Consensus 335 ~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k 368 (428)
T PF13347_consen 335 IPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIK 368 (428)
T ss_pred ccccccccchhhHHHhcCCCchHHHHHhhhhhhH
Confidence 8888888887743 23556666555433
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.68 E-value=2.4e-13 Score=139.44 Aligned_cols=320 Identities=13% Similarity=0.027 Sum_probs=166.9
Q ss_pred hhhhhHHHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhh----hhCchHH-HHHHHHHHHHHHH-HHHhcc--
Q 013096 70 EGLWSVFGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISD----LIGQKKV-CLIFFILHLFVGV-WKSITA-- 140 (449)
Q Consensus 70 ~~~~~~~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laD----r~GRr~~-ll~~~~~~~~~~l-~~~~~s-- 140 (449)
..+..++++..|. ..|+++.++|.++.+.-+.-++..|+.|.++| |+||||. ++++.+..+++.. +...++
T Consensus 22 ~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~ 101 (473)
T PRK10429 22 IGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFE 101 (473)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCC
Confidence 3345666666565 56999999999999999999999999999999 6699555 5556666666644 322221
Q ss_pred ----hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccc----cC
Q 013096 141 ----HPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDV----KK 212 (449)
Q Consensus 141 ----~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~----~~ 212 (449)
+..+++.-++.+++.+.......+ +.+|.. ++ .++..+..+.-.....++..+.+.+...+.+... ..
T Consensus 102 ~~~~~~~~~~~~~l~~~~~t~~~ip~~a-l~~~lt-~~--~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~ 177 (473)
T PRK10429 102 GTAQYVFVCVTYILWGMTYTIMDIPFWS-LVPTLT-LD--KREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGF 177 (473)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcchHHh-hhHHhC-CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 334555555666665554443333 334432 12 1223333333222222222222222211111110 11
Q ss_pred CcchhHHHHHHHHHHHHHHHHhccccCCCCC-------cchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 013096 213 GVVPSSTASVFLSILGIICVSRGWTENPKMA-------FDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPT 285 (449)
Q Consensus 213 g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 285 (449)
+|+....+.++..+++.+...+..||.+.++ ++...++.++.+++||.++.+.....+.....+.. ....+.
T Consensus 178 g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~-~~~~~y 256 (473)
T PRK10429 178 GFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNII-NGFAIY 256 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-hhheee
Confidence 3444444433333333333444456643211 11122445677889988877655444443322222 223343
Q ss_pred hccC--CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHh---c-ccchhHHHHHHHHH
Q 013096 286 LVAD--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA---Y-DYQEIGILVALFCL 359 (449)
Q Consensus 286 ~~~~--~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~---~-~~~~~~~~~~~~~l 359 (449)
+.+. +++...+.......++.+++..+.+++.| |+++++.+..+..+..++..... . ..++.+..++...+
T Consensus 257 ~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~---r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 333 (473)
T PRK10429 257 YFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVK---SLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGIL 333 (473)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHH
Confidence 4332 22333455555555777888899999998 78888876655433222221111 1 22233333344445
Q ss_pred HHHHhhhhhhHHHHHHhccCCCc-----ch--hHHHHhhHHHHHH
Q 013096 360 FHACVGLILPSLARLRTMYVPNE-----LR--GGMISLSLAPANA 397 (449)
Q Consensus 360 ~~~~~g~~~p~~~~~~~~~~p~~-----~r--g~~~~~~~~~~~~ 397 (449)
.+++.+..++...++.+|..|.+ .| |..+|.......+
T Consensus 334 ~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~ 378 (473)
T PRK10429 334 LNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG 378 (473)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH
Confidence 66777777777778888886632 22 3355655544333
No 106
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.67 E-value=2.1e-12 Score=131.34 Aligned_cols=141 Identities=12% Similarity=0.037 Sum_probs=94.4
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh-CchHHHHHHHHHHHHHHH-HHHhc-chhHHHHHHHHHHhHHHHh
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI-GQKKVCLIFFILHLFVGV-WKSIT-AHPSVWVANICLSLASSIF 158 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~-GRr~~ll~~~~~~~~~~l-~~~~~-s~~~l~~~R~l~Glg~~~~ 158 (449)
+++|+++.+.+.+...+.....++.+++|+++||+ ||||+++++.++..++.+ +...+ +...+.+.-.+.++|.|..
T Consensus 38 ~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~ 117 (493)
T PRK15462 38 NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLF 117 (493)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccc
Confidence 56899999999888888888888889999999999 999999999988887764 44332 2233444444455555554
Q ss_pred hhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHH
Q 013096 159 SFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILG 228 (449)
Q Consensus 159 ~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~ 228 (449)
.+...+ ++.|.-+.+.+ +....++....+..++..++|.+.+++.+.+ ||++.|.+.++..+++
T Consensus 118 ~~~~~a-lv~elfp~~~~--~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~---Gw~~~F~iaaigm~l~ 181 (493)
T PRK15462 118 KSNVSC-LLGELYEPTDP--RRDGGFSLMYAAGNVGSIIAPIACGYAQEEY---SWAMGFGLAAVGMIAG 181 (493)
T ss_pred cccHHH-HHHHHCCCCCc--cccceehHHHHHHHHHHHHHHHHHHHHHhhh---ChHHHHHHHHHHHHHH
Confidence 444333 45554221101 1233455544455567788999999987755 8999998765443333
No 107
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.65 E-value=7.6e-21 Score=193.65 Aligned_cols=350 Identities=15% Similarity=0.159 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhc---chhHHHHHHHHHHhHHHHhhhhhHH
Q 013096 89 EQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSIT---AHPSVWVANICLSLASSIFSFNFET 164 (449)
Q Consensus 89 ~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~---s~~~l~~~R~l~Glg~~~~~~~~~a 164 (449)
.+.++..+..+++..+++++.|.++||+|||++++.+..+..++++ ..+++ |++.+.++|+++|++.|...+....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4567788899999999999999999999999999999999988876 77888 9999999999999999987766543
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccCCCC--
Q 013096 165 WVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM-- 242 (449)
Q Consensus 165 ~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~-- 242 (449)
++.|..++..+ ++.....+....++.+++..++.......++++||..+.+..++.++..+ ....+||+|+-
T Consensus 126 -~~~E~~~~~~R----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~ 199 (451)
T PF00083_consen 126 -YISEIAPPKHR----GFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLL 199 (451)
T ss_pred -ccccccccccc----cccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceec
Confidence 56666432222 22222222222333333433333221111124699998887776655433 33467887531
Q ss_pred -----Cc-c----h--------h--------hh------hhhHhhhcChh----HHHHHHHHHHHHHHHHHHHHHhhhhh
Q 013096 243 -----AF-D----D--------Y--------RT------SFFTYIFGDKR----IWLLVLAQACLQFSIALFWILWAPTL 286 (449)
Q Consensus 243 -----~~-~----~--------~--------~~------~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~ 286 (449)
++ + + . .+ ..+++++++++ +........+.+...+.....+.|.+
T Consensus 200 ~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i 279 (451)
T PF00083_consen 200 SKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSI 279 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccc
Confidence 00 0 0 0 00 12445666533 22211111111111122233455665
Q ss_pred ccC-CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHh---cc-cch----hHHHHHHH
Q 013096 287 VAD-GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA---YD-YQE----IGILVALF 357 (449)
Q Consensus 287 ~~~-~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~---~~-~~~----~~~~~~~~ 357 (449)
.++ +.+.+. .......+...++..+...+.| |+++|+.+..+..+.+++..... .. .++ ....+...
T Consensus 280 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 355 (451)
T PF00083_consen 280 FENAGISNSF-LATLILGLVNFLGTLLAIFLID---RFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFL 355 (451)
T ss_pred cccccccccc-cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccceee
Confidence 543 211110 0111112334456666667888 78888776665544443333221 11 111 11122222
Q ss_pred HHHHHHhh-hhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcc-hhHHHHHHHHHHHHHHHHHHH
Q 013096 358 CLFHACVG-LILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIE-NAAMVAFAALGLFIAAGCMHV 434 (449)
Q Consensus 358 ~l~~~~~g-~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 434 (449)
+++.+..+ ...|....+..|.+|++.|+++.++......++....+.. ....+..+ ......+.++.++.....+.+
T Consensus 356 ~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~ 435 (451)
T PF00083_consen 356 ALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFF 435 (451)
T ss_pred eeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEE
Confidence 22222222 2235556777999999999999988776555433222221 11222333 333344555566656556667
Q ss_pred HHHhhcCCCccccC
Q 013096 435 LKRWGKQPYQNWHK 448 (449)
Q Consensus 435 ~~~~~~~~~~~~~~ 448 (449)
++|++.++.+|.++
T Consensus 436 lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 436 LPETKGKTLEEIQE 449 (451)
T ss_pred EeeCCCCCHHHHHh
Confidence 89999888888765
No 108
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.62 E-value=6e-13 Score=128.67 Aligned_cols=270 Identities=12% Similarity=0.005 Sum_probs=165.4
Q ss_pred HhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccc------
Q 013096 137 SITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDV------ 210 (449)
Q Consensus 137 ~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~------ 210 (449)
...+++.++++-++.|.|.+..-++.+. ++.+.. ++|+.++.++..+..++++.+++|.+++.+.....
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~-~v~~~~----~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~ 80 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANP-YVSILG----PIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQ 80 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHH-HHHHHC----CcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhh
Confidence 4468999999999999999988887765 444442 22335556677777888888999999998773210
Q ss_pred -------cCCcchhHHHH-HHHHHHHHHHHHhccccCCCCCcch---hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHH
Q 013096 211 -------KKGVVPSSTAS-VFLSILGIICVSRGWTENPKMAFDD---YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFW 279 (449)
Q Consensus 211 -------~~g~~~~f~~~-~~~~~~~~~~i~~~~~e~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 279 (449)
.++|+.+|.+. ....++..++.+...||.+++++++ .+....+.++++|+++...+.. +++.+.-..+
T Consensus 81 ~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-f~yvg~e~~~ 159 (310)
T TIGR01272 81 VATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGDTTQKTSAFQFTHLVLGALGI-FVYVGAEVSA 159 (310)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccccccccccchhhHHhhHHHHHHHHHH-HHHHHHHHHH
Confidence 13688899854 3334433333333455543322111 1111123466677666543332 3333233344
Q ss_pred HHhhhhhccC----C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHH
Q 013096 280 ILWAPTLVAD----G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILV 354 (449)
Q Consensus 280 ~~~~p~~~~~----~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 354 (449)
..|.|.|+.+ + ++...+..++.+..++++|..+.+++.| |++.+|.+..+..+..+...+....++. ...
T Consensus 160 ~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~---r~g~~~~l~~~~~l~~~~~~l~~~~~~~--~~~ 234 (310)
T TIGR01272 160 GSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMP---MISQGRYLAFNAFLAVLLSIGAALTHGY--VAM 234 (310)
T ss_pred HHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCHHHHHHHHHHHHHHHHHHHHHcCCH--HHH
Confidence 5688888853 2 3445677888888999999999999999 8888887765544444333322222221 223
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHH-HHHHHHHhHHhhhcchhHHHH
Q 013096 355 ALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA-ILLFLLLRGFYRNIENAAMVA 419 (449)
Q Consensus 355 ~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~ 419 (449)
..+++.+++.+..+|...+...+..|++ .+++.++.. ...++ .+..++.|.+.|..+....+.
T Consensus 235 ~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~~-~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 235 WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGILC-LAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHHH-HHHhcchHHHHHHHHHHHhccchHHHH
Confidence 3555678889999999988888877754 455555542 33343 333444576667666544433
No 109
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.62 E-value=9.6e-14 Score=130.77 Aligned_cols=368 Identities=13% Similarity=0.054 Sum_probs=201.3
Q ss_pred cchhhhHHHHHHHHHHHHHhhhhh----HHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHH
Q 013096 51 SFVPFQRNFLLLFSLASVMEGLWS----VFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFF 126 (449)
Q Consensus 51 ~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~ 126 (449)
.|.++|.....+.-.+.+.|-+.. -+.|.+-..+|.+..|..++...-+.+..+++-.+|.++|++|||+......
T Consensus 71 gfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 71 GFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred CcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 466677666555444444443322 2334445678988888888888888999999999999999999999988877
Q ss_pred HHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 013096 127 ILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWL 205 (449)
Q Consensus 127 ~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l 205 (449)
..-.+... .+.++|+.++.+.|.+.|+|.|. .|...+|+. |..+.. .+.........+. ++.+....+.-..
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yl-e~lp~~-~r~~~~V~~~~wa----ig~v~ea~law~v 223 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYL-EFLPSS-HRWLLTVMSFFWA----IGQVFEALLAWGV 223 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHH-HhccCc-CCCcchhHHHHHH----HHHHHHHHHHHHH
Confidence 66555444 77889999999999999999988 666555553 332211 1111111222222 3334444555555
Q ss_pred hcccccCCcchhHHHHHHHHHHHHHHHHhccccCCCC------Ccc--------------------------hh--h---
Q 013096 206 VGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM------AFD--------------------------DY--R--- 248 (449)
Q Consensus 206 ~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~------~~~--------------------------~~--~--- 248 (449)
+.+. |||+.......+..+... ..+..+|+++- +.+ +. +
T Consensus 224 m~~~---gwr~~l~~~~~pl~~~a~-f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~ 299 (528)
T KOG0253|consen 224 MSNF---GWRYLLFTSSTPLMFAAR-FLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEES 299 (528)
T ss_pred HHhh---hHHHHHHHHHhHHHHHHH-HHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhh
Confidence 5554 677655554443333222 22235776531 000 00 0
Q ss_pred -------------hhhhHhhhcC---hhHHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---------c--cc-------
Q 013096 249 -------------TSFFTYIFGD---KRIWLLVLAQACLQFSIALFWILWAPTLVADGR---------E--VH------- 294 (449)
Q Consensus 249 -------------~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---------~--~~------- 294 (449)
+...++++.. |+.+.+.... +.+...|+.....+-.+.+.++ + .+
T Consensus 300 ~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iw-fgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~ 378 (528)
T KOG0253|consen 300 DLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIW-FGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPL 378 (528)
T ss_pred chhhhhhccccccccchHhhcChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCc
Confidence 0112333321 1222221111 1121122211111222222110 0 00
Q ss_pred ---hHHHH-HHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhH
Q 013096 295 ---LGLIF-PSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPS 370 (449)
Q Consensus 295 ---~g~i~-~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~ 370 (449)
.-+.- .....+-.-|.++.+++.| |+|+++.+...+++.++.++............++. +..-++....+.+
T Consensus 379 s~~~dYrdllitslaefPGlLIt~~ive---rlGRKkTMal~l~~f~iflfll~~c~~rn~~tvll-f~arafisg~fqv 454 (528)
T KOG0253|consen 379 SVAKDYRDLLITSLAEFPGLLITGVIVE---RLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLL-FTARAFISGAFQV 454 (528)
T ss_pred cchhHHHHHHHHHHhhCCchhHHHHHHH---HhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHH-HHHHHHHhchheE
Confidence 00100 1122445678889999999 89999988877777777666443322222222322 2334555556677
Q ss_pred HHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhcch-hHHHHHHHHHHHHHHHHHHHHH
Q 013096 371 LARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIEN-AAMVAFAALGLFIAAGCMHVLK 436 (449)
Q Consensus 371 ~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~ 436 (449)
.+.+..|.+|+..|+++.|....+.-++.+..+++. ...+.+. -..++..+|.++.. ++..+++
T Consensus 455 aYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~ilag-IavcffP 519 (528)
T KOG0253|consen 455 AYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGALFILAG-IAVCFFP 519 (528)
T ss_pred EEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHHHHHHH-HHheeee
Confidence 778889999999999988887666666554454433 2233332 33445556655544 3444433
No 110
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.60 E-value=3.5e-11 Score=122.46 Aligned_cols=317 Identities=14% Similarity=0.082 Sum_probs=166.6
Q ss_pred HHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHH-HHHHHH-HHH-hcchhHH-HHHHHHHHhHHHHhhhhhHHHHH
Q 013096 92 MLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFIL-HLFVGV-WKS-ITAHPSV-WVANICLSLASSIFSFNFETWVA 167 (449)
Q Consensus 92 g~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~-~~~~~l-~~~-~~s~~~l-~~~R~l~Glg~~~~~~~~~a~~v 167 (449)
+...++..+..++..|+.|.++|+-||||-++....+ ..+++. ..+ .++-+++ .+.-++.-++.+.....-++ +.
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna-~L 151 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA-YL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence 4556777778888899999999999988887765443 344443 333 3443332 22223333333322222223 44
Q ss_pred HHHHhhcCCh-h---------------------hHHHHHHHHHHHhHHHHHHHHHHHHHHhcccc-----cCCcchhHHH
Q 013096 168 IEHEKQGQRQ-D---------------------ILSDTFWLMTFFESAALIGGQVLANWLVGIDV-----KKGVVPSSTA 220 (449)
Q Consensus 168 ~~~~~r~~~~-~---------------------~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~-----~~g~~~~f~~ 220 (449)
+|..+++... + ..++..+.....+.++.++.-.+.-.+..... .++.|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 4442211110 0 01333333222233333333332222211110 1234555655
Q ss_pred HHHHHHHHHHHHHhccccCCC-C--Cc-chh-------hhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 013096 221 SVFLSILGIICVSRGWTENPK-M--AF-DDY-------RTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD 289 (449)
Q Consensus 221 ~~~~~~~~~~~i~~~~~e~~~-~--~~-~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 289 (449)
.++..++..+...+..||.++ + +. ++. ..+.++++.|+|.+..+.+..++.+-+..+... ....+..+
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~-~~~i~a~~ 310 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIIS-FAGIYATE 310 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 544433333334445566554 1 11 111 123456677778877766665555544444322 23344332
Q ss_pred --C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCch--hHHHHHHHHH-HHHHHHHh------cccchhHHHHHHH
Q 013096 290 --G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE--DCLLYAFVVL-GFVFSIIA------YDYQEIGILVALF 357 (449)
Q Consensus 290 --~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~--~~l~~~~~~~-~~~l~~~~------~~~~~~~~~~~~~ 357 (449)
+ +..+...+.....+..++|+.+.+++.| |++.+ +.+....... .+++.... ...++.+...+.-
T Consensus 311 ~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~---r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a 387 (477)
T PF11700_consen 311 VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQD---RFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLA 387 (477)
T ss_pred hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHH
Confidence 2 3344444445556778899999999998 78877 6655443332 22222111 0112233333344
Q ss_pred HHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHH-HhHHhhhcc
Q 013096 358 CLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLL-LRGFYRNIE 413 (449)
Q Consensus 358 ~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 413 (449)
++.+...|..++..-++.+++.|+++.+..+|++.+..-.....+++ .|...+..+
T Consensus 388 ~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg 444 (477)
T PF11700_consen 388 VLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG 444 (477)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 46678888889999999999999999999999988766655444444 455555444
No 111
>PRK11462 putative transporter; Provisional
Probab=99.60 E-value=3.1e-11 Score=123.30 Aligned_cols=299 Identities=9% Similarity=0.013 Sum_probs=150.8
Q ss_pred hHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhh----hCchHHHH-HHHHHHHHHHHHHH-hcc------
Q 013096 74 SVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDL----IGQKKVCL-IFFILHLFVGVWKS-ITA------ 140 (449)
Q Consensus 74 ~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr----~GRr~~ll-~~~~~~~~~~l~~~-~~s------ 140 (449)
+.++...| +..|+++..+|.++.+.-+-=++..|+.|.++|| +||||..+ ++.+..++++...+ .|+
T Consensus 29 ~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~ 108 (460)
T PRK11462 29 MLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGK 108 (460)
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchH
Confidence 33443444 4689999999999999988888999999999996 79988865 45566666654322 332
Q ss_pred hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccc----cCCcch
Q 013096 141 HPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDV----KKGVVP 216 (449)
Q Consensus 141 ~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~----~~g~~~ 216 (449)
+..+.+.-++..++.........+ +.+|.. +| .++..+..+.-..++.++..+++.+...+.+... ..+|+.
T Consensus 109 ~~y~~~~~~~~~~~~t~~~ipy~a-l~~~lt-~d--~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~ 184 (460)
T PRK11462 109 MIYAAITYTLLTLLYTVVNIPYCA-LGGVIT-ND--PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQG 184 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHH-HHHHhc-CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 334445555556665544333333 344432 22 2233444444333433333333333222222110 124544
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCCCC-cchhhhhhhHhhhcChhHHHHHHHHHHHHHHH--HHHHHHhhhhhccCCCcc
Q 013096 217 SSTASVFLSILGIICVSRGWTENPKMA-FDDYRTSFFTYIFGDKRIWLLVLAQACLQFSI--ALFWILWAPTLVADGREV 293 (449)
Q Consensus 217 ~f~~~~~~~~~~~~~i~~~~~e~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~ 293 (449)
...+.+++.+++..+.....+|.++++ ++...++.++.+++||..+.+.....+..... ......+...+.. +.+.
T Consensus 185 ~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~-g~~~ 263 (460)
T PRK11462 185 GIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWIL-GTPE 263 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcceeccCCCccCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhc-CChH
Confidence 444433444444333333445543222 12123455788899988766543322221111 1111111222221 2222
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHH-HHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHH
Q 013096 294 HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF-VFSIIAYDYQEIGILVALFCLFHACVGLILPSLA 372 (449)
Q Consensus 294 ~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~ 372 (449)
..+.+.....++.++|..+.+++.| |+++++....+..+.++ .+........+........++.+++.+...+...
T Consensus 264 ~~~~~l~~~~i~~iig~~l~~~l~~---r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 264 VFVAFLTTYCVGNLIGSALAKPLTD---WKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666778889999999998 67766654433222222 1221112222222223333444555555555556
Q ss_pred HHHhccCC
Q 013096 373 RLRTMYVP 380 (449)
Q Consensus 373 ~~~~~~~p 380 (449)
++..|..+
T Consensus 341 ~m~ad~~d 348 (460)
T PRK11462 341 VMMSDTVD 348 (460)
T ss_pred HHHHHhHh
Confidence 66666544
No 112
>PTZ00207 hypothetical protein; Provisional
Probab=99.58 E-value=2.2e-11 Score=126.03 Aligned_cols=136 Identities=9% Similarity=0.093 Sum_probs=97.0
Q ss_pred hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh------cchhHHHH
Q 013096 74 SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI------TAHPSVWV 146 (449)
Q Consensus 74 ~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~------~s~~~l~~ 146 (449)
+.+.+++.+++|+|.+|++.+.+.+... ..++++.|+++||+|||++++++.+++.++.+ ++++ ++++.+.+
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l 125 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSV 125 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 4556777889999999999888775543 45677899999999999999999999998876 6665 68999999
Q ss_pred HHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHH-HHHHHHHHHhcccccCCcchhHHHH
Q 013096 147 ANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALI-GGQVLANWLVGIDVKKGVVPSSTAS 221 (449)
Q Consensus 147 ~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i-~a~~lg~~l~~~~~~~g~~~~f~~~ 221 (449)
.|+++|+|.+...+.... .+.+ -++ ++.+.+.+......+++.. .+++...++.+ +|+..|++.
T Consensus 126 ~r~l~G~G~~~~~~~~~~-~i~~----~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-----~~~~~fl~l 190 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVV-TVLS----VFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-----NTSAYFFFL 190 (591)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHH----hCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHH
Confidence 999999998876555432 2222 233 2346677776666666554 45555555432 445555543
No 113
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.45 E-value=2.1e-11 Score=120.81 Aligned_cols=142 Identities=8% Similarity=-0.004 Sum_probs=101.0
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhh
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSF 160 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~ 160 (449)
+++|.++.+.+.+..........+.++.|+++||+|||+++..+.+...+..+ ....++.+.+.+.++++|++.+...+
T Consensus 228 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 307 (375)
T TIGR00899 228 HELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAG 307 (375)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999998877766666677788999999999999998877665444433 34457788888899999998887665
Q ss_pred hhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHH
Q 013096 161 NFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICV 232 (449)
Q Consensus 161 ~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i 232 (449)
...+ +..|.. ++ +.++..+.......++..++|.+++++.+.. ||+..|...++..+++.+..
T Consensus 308 ~~~~-~~~~~~----~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~---g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 308 IGML-YFQDLM----PG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW---SYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHH-HHHHhC----cc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cchhHHHHHHHHHHHHHHHH
Confidence 5433 233322 22 2345666665555577788889888887755 78888888776666655433
No 114
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.45 E-value=1.9e-11 Score=122.38 Aligned_cols=154 Identities=7% Similarity=-0.059 Sum_probs=103.2
Q ss_pred HHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHH
Q 013096 75 VFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLS 152 (449)
Q Consensus 75 ~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~G 152 (449)
...|..+ +++|.++.+.+.+.+...+...++.++.|+++||+|||+.+..+.....+... ....++.+.+++.|++.+
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3444444 46899999999877776677777889999999999999988776555444333 334577888888999988
Q ss_pred hHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHH
Q 013096 153 LASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICV 232 (449)
Q Consensus 153 lg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i 232 (449)
++.+...+.... +..|..+ + +.+...+..+....++..++|.+++.+.+.+ ||+.+|.+..++.+++.+..
T Consensus 317 ~~~g~~~~~~~~-~~~~~~p----~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~---g~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK15011 317 IYIGILGGIGML-YFQDLMP----G-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIW---NYHAVFWFALVMIIATLFCL 387 (393)
T ss_pred HHHHHHHHHHHH-HHHHhCC----C-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHH
Confidence 877765444322 2333322 1 2344555544444566677888888887754 88889988777766665544
Q ss_pred Hhcccc
Q 013096 233 SRGWTE 238 (449)
Q Consensus 233 ~~~~~e 238 (449)
. ..||
T Consensus 388 ~-~~~~ 392 (393)
T PRK15011 388 L-RIKD 392 (393)
T ss_pred H-hhcC
Confidence 4 4454
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.44 E-value=1.3e-10 Score=114.91 Aligned_cols=153 Identities=14% Similarity=0.126 Sum_probs=110.1
Q ss_pred hhhhHHHHHHHHHhC----CChHHHHHHHHHHHHhHHHHHHHHHhhhhhh-CchHHHHHHHHHHHHHHH-HHHh--cchh
Q 013096 71 GLWSVFGEYELVYYG----VAKEQMMLLLCAGFSAALFVGSFLGMISDLI-GQKKVCLIFFILHLFVGV-WKSI--TAHP 142 (449)
Q Consensus 71 ~~~~~~~~~l~~~~g----~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~-GRr~~ll~~~~~~~~~~l-~~~~--~s~~ 142 (449)
+++.++...++.+++ +|+++...+++++..-.-+...++|+++||+ |+||++..+.+++.++-+ .+.. .+..
T Consensus 39 GmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~ 118 (498)
T COG3104 39 GMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPG 118 (498)
T ss_pred hhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccccc
Confidence 567777777777777 9988876666555433334467899999998 999999999999998876 4444 3678
Q ss_pred HHHHHHHHHHhHHHHhhhhhHHHHHHHHH-hhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHH
Q 013096 143 SVWVANICLSLASSIFSFNFETWVAIEHE-KQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTAS 221 (449)
Q Consensus 143 ~l~~~R~l~Glg~~~~~~~~~a~~v~~~~-~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~ 221 (449)
.++++-++.++|.|..-+...+ ++.|.- ++| ++ ....++...++..++...+|.+.+++.+.+ ||+..|.++
T Consensus 119 gl~i~L~~I~iG~Gl~K~NiS~-llg~ly~~~D-pr--rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~---g~~~gF~~a 191 (498)
T COG3104 119 GLYIGLALIIVGTGLFKPNISS-LLGELYPKDD-PR--RDGGFTLFYMGINIGSLIAPIITGLLAINY---GWHVGFGLA 191 (498)
T ss_pred HHHHHHHHHHhccccccccHHH-HHHHhcCCCC-cc--cCCCccEEEEEeehHHHHHHHHHHHHHHhh---CHHHHHHHH
Confidence 8999999999999988887655 555553 333 22 223444444445567788888888888866 888999887
Q ss_pred HHHHHHHHH
Q 013096 222 VFLSILGII 230 (449)
Q Consensus 222 ~~~~~~~~~ 230 (449)
.+...++++
T Consensus 192 avGm~~gl~ 200 (498)
T COG3104 192 AVGMIIGLV 200 (498)
T ss_pred HHHHHHHHH
Confidence 666555543
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.43 E-value=5.3e-10 Score=111.44 Aligned_cols=300 Identities=13% Similarity=0.094 Sum_probs=168.6
Q ss_pred hhHHHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhh----hCchHHHH-HHHHHHHHHHH-HHHhc------
Q 013096 73 WSVFGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDL----IGQKKVCL-IFFILHLFVGV-WKSIT------ 139 (449)
Q Consensus 73 ~~~~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr----~GRr~~ll-~~~~~~~~~~l-~~~~~------ 139 (449)
...++...|. .+|+++..+|.++.+.=+-=++..|+.|.++|| +||||..+ ++.+-+++.+. +-.++
T Consensus 31 ~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~ 110 (467)
T COG2211 31 VVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTG 110 (467)
T ss_pred HHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCc
Confidence 3445555554 689999999999998888889999999999996 88888855 55566776654 44444
Q ss_pred chhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHH----HHhHHHHHHHHHHHHHHhcccccCCcc
Q 013096 140 AHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMT----FFESAALIGGQVLANWLVGIDVKKGVV 215 (449)
Q Consensus 140 s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~----~~~~~~~i~a~~lg~~l~~~~~~~g~~ 215 (449)
+....++.-.+.+++.+.....-++ +.+|. .++.. +..+..+.-. .++.+..++.+++-..+.+.....||+
T Consensus 111 k~~ya~vtY~l~~l~YT~vniPy~a-l~~~i-T~d~~--ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~ 186 (467)
T COG2211 111 KLIYALVTYMLLGLGYTLVNIPYGA-LGPEI-TQDPQ--ERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQ 186 (467)
T ss_pred chHHHHHHHHHHHHHHHheeCchhh-cchhh-cCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHH
Confidence 2344555566777776654332233 33433 22321 2222333222 222233333334444433321123554
Q ss_pred hhHHHHHHHHHHHHHHHHhccccCCCCC--cc----hhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 013096 216 PSSTASVFLSILGIICVSRGWTENPKMA--FD----DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD 289 (449)
Q Consensus 216 ~~f~~~~~~~~~~~~~i~~~~~e~~~~~--~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 289 (449)
..-.+..+...+..+..++..+|...++ .+ ...++.+..+++||+.+.+.+...+...+ +.........+.+.
T Consensus 187 ~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~-~~i~~s~~~yy~~y 265 (467)
T COG2211 187 GTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIA-FNIRGSIMVYYVTY 265 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHhhhhheeEEE
Confidence 4433333444444444555556654321 11 12233456788999888766643333222 22222223333332
Q ss_pred ---CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHhh
Q 013096 290 ---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY-QEIGILVALFCLFHACVG 365 (449)
Q Consensus 290 ---~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~l~~~~~g 365 (449)
..+...+........+.+.+..+.+++.+ |+++++....+.++..++-....+.+ ++..+.+...++.+++.+
T Consensus 266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~---~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~ 342 (467)
T COG2211 266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVK---KFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTG 342 (467)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHH---HhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhh
Confidence 23333444444555666677899999998 78888887776555544443333333 334444455567778888
Q ss_pred hhhhHHHHHHhccCC
Q 013096 366 LILPSLARLRTMYVP 380 (449)
Q Consensus 366 ~~~p~~~~~~~~~~p 380 (449)
...+...++..|..+
T Consensus 343 ~~~~l~wam~~d~vD 357 (467)
T COG2211 343 IANPLPWAMVADTVD 357 (467)
T ss_pred ccccccHHHhcchhh
Confidence 888888888887655
No 117
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.41 E-value=5.6e-11 Score=118.54 Aligned_cols=149 Identities=11% Similarity=0.048 Sum_probs=111.9
Q ss_pred hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHH
Q 013096 72 LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANIC 150 (449)
Q Consensus 72 ~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l 150 (449)
....+.+...+|.|.++.++|.+...+.++..+..++.|++.||+|+|+.+..+.+...+... ..+++|.+.+++.+++
T Consensus 223 ~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l 302 (382)
T TIGR00902 223 AYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQIL 302 (382)
T ss_pred HHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHH
Confidence 334455565678999999999998888888888899999999999999999988888877654 5678999999999999
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHH-HHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMT-FFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGI 229 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~-~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~ 229 (449)
+|+..+...++... ++.+ . ++++.+..++..+ ...+++..+++.++|++.+.. |+ ..|...+...+++.
T Consensus 303 ~g~~~~~~~~~~~~-~i~~----~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~---g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 303 HCGTFAVCHLAAMR-YIAA----Q-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL---GA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHH-HHHh----C-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cH-HHHHHHHHHHHHHH
Confidence 99999988777543 3332 2 4444555566543 345677788999999998865 64 45666555555554
Q ss_pred H
Q 013096 230 I 230 (449)
Q Consensus 230 ~ 230 (449)
+
T Consensus 373 ~ 373 (382)
T TIGR00902 373 F 373 (382)
T ss_pred H
Confidence 3
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.39 E-value=8.3e-09 Score=100.34 Aligned_cols=302 Identities=12% Similarity=0.043 Sum_probs=165.7
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhC-----chHHHHHHHH-HHHHHH-H-----HHHhc-------ch-
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIG-----QKKVCLIFFI-LHLFVG-V-----WKSIT-------AH- 141 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~G-----Rr~~ll~~~~-~~~~~~-l-----~~~~~-------s~- 141 (449)
.|++++..-++.+.+.-++.+.. .+.+|..||+++ ||...++... +...+. + ..+.. +.
T Consensus 8 vEL~vpA~lv~~lval~~~~ap~-R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAPL-RVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHHH-HHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 57888888888777777766554 889999999999 9999887533 332221 1 11222 11
Q ss_pred -h--HHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhH
Q 013096 142 -P--SVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSS 218 (449)
Q Consensus 142 -~--~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f 218 (449)
+ ...+.-.+.|+|.+...++..+ +..|.. ++|+.+++.+.+-....++.+++..+.+.+.+.+...+-...+
T Consensus 87 ~g~~~a~l~F~l~G~G~~~s~T~~lA-Ll~D~~----~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~ 161 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGVHASGTSFLA-LLADLA----PEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVI 161 (403)
T ss_pred HHHHHHHHHHHHHHhhHhHhHHHHHH-HHHhcC----CHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence 2 3445566778877765555433 334432 3333444444433333344566666667666644111111111
Q ss_pred HHH-HHHHHHHHHHHHhccccCCCC--C-----cchhhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC-
Q 013096 219 TAS-VFLSILGIICVSRGWTENPKM--A-----FDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD- 289 (449)
Q Consensus 219 ~~~-~~~~~~~~~~i~~~~~e~~~~--~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~- 289 (449)
... .+...+..+.++. .|.+.+ . ++...++.++++.+||+...+....++...+++. +-.+++-
T Consensus 162 ~~~a~i~~~l~~ia~wg--~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~-----QD~iLEPy 234 (403)
T PF03209_consen 162 QGVALIALLLNLIALWG--QEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFM-----QDVILEPY 234 (403)
T ss_pred HHHHHHHHHHHHHHHHh--cccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHh-----hHHHcCCc
Confidence 111 1222222222332 232211 1 1112245678888888777654433333222221 2223321
Q ss_pred -----C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHH--HHhcccchhHHHHHHHHHHH
Q 013096 290 -----G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFS--IIAYDYQEIGILVALFCLFH 361 (449)
Q Consensus 290 -----~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~l~~ 361 (449)
+ +..+.....+....+..+|-.+.+++..+ |.++++....+..+..+++. +.+-..++.+.+-....+++
T Consensus 235 gg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~--~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 235 GGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR--RLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred hhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 1 22334455566677888888888888875 66666655555444333332 22222223445556677889
Q ss_pred HHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHH
Q 013096 362 ACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 398 (449)
Q Consensus 362 ~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~ 398 (449)
++.|+.....-+...+..++++.|..+|.-...+..+
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A 349 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIA 349 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHH
Confidence 9999888777778888988898898888766555443
No 119
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.37 E-value=5.8e-10 Score=108.67 Aligned_cols=340 Identities=15% Similarity=0.041 Sum_probs=166.9
Q ss_pred chhhhHHHHHH--HHHHHH---Hhhhh-hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHH
Q 013096 52 FVPFQRNFLLL--FSLASV---MEGLW-SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIF 125 (449)
Q Consensus 52 ~~~~~~~~~~~--~~l~~~---~~~~~-~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~ 125 (449)
.|-.+||++++ +.+... ..|++ +|.--..-..|| +....-+.-.++.+.+...+.++=++.|++|-|...+++
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 34455555443 333333 33443 343322223566 555556677777788888888999999999999999999
Q ss_pred HHHHHHHHH--HHHh-c----chh--HHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHH
Q 013096 126 FILHLFVGV--WKSI-T----AHP--SVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALI 196 (449)
Q Consensus 126 ~~~~~~~~l--~~~~-~----s~~--~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i 196 (449)
.....+++. +.-+ + .++ ....+..+.+.+.-..... .+....--++.++.+.+.....++|-++..
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~l-----PskiA~~WF~~~qra~A~~~~v~~n~LGva 190 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGL-----PSKIAAVWFPPDQRAIATVLGVMGNPLGVA 190 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhcc-----ccHHHHhhCCcchhhhhhhHHHhcchHHHH
Confidence 999888764 2211 2 223 3334444443333221111 011111123444444444444445544444
Q ss_pred HHHHHHHHHhccc---ccCCcch--hHHHHHHHHHHHHHHHHhccccC---CCCC-cchh----hhhhhHhhhcChhHHH
Q 013096 197 GGQVLANWLVGID---VKKGVVP--SSTASVFLSILGIICVSRGWTEN---PKMA-FDDY----RTSFFTYIFGDKRIWL 263 (449)
Q Consensus 197 ~a~~lg~~l~~~~---~~~g~~~--~f~~~~~~~~~~~~~i~~~~~e~---~~~~-~~~~----~~~~~~~l~~~~~~~~ 263 (449)
++-++...+.++. .+..|.. .|.....+.++.+.+..+..+|. ++.. ..+. ..++.+..++|+++..
T Consensus 191 vg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~i 270 (480)
T KOG2563|consen 191 VGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFII 270 (480)
T ss_pred HHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHH
Confidence 4444444444322 0123322 23222222221112222222332 2211 1111 2345778899999987
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCC-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHH-HH
Q 013096 264 LVLAQACLQFSIALFWILWAPTLVADG-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV-FS 341 (449)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~-l~ 341 (449)
+.+......+.++.......+.+...+ .+...|.+.....++.++|+.+.+.+.||+++++ ...........++ +.
T Consensus 271 l~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk--~~~~v~~~~~~v~~~~ 348 (480)
T KOG2563|consen 271 LAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFK--LTTLVLYLFALVGTLM 348 (480)
T ss_pred HHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH--HHHHHHHHHHHHHHHH
Confidence 766555444433332222222222122 3456788888788889999999999999644332 2222222112222 22
Q ss_pred HHhc--ccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHH
Q 013096 342 IIAY--DYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 399 (449)
Q Consensus 342 ~~~~--~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~ 399 (449)
+... .....+.+.....+++++.-...|.-..+..|..=++.-|+-.|+.+...++..
T Consensus 349 l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~ 408 (480)
T KOG2563|consen 349 LLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFG 408 (480)
T ss_pred HHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHH
Confidence 1111 111122223333344555545677666666666444555666777666555543
No 120
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.36 E-value=1.4e-10 Score=117.03 Aligned_cols=163 Identities=12% Similarity=0.028 Sum_probs=114.3
Q ss_pred HHHHHHHHHhCCCh--------HHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh-c---ch
Q 013096 75 VFGEYELVYYGVAK--------EQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI-T---AH 141 (449)
Q Consensus 75 ~~~~~l~~~~g~s~--------~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~-~---s~ 141 (449)
.+.+...++.|.++ ++.+...+...+...++.++.|+++||+|||++++.+.++..+... .... + +.
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 33344445666443 5567778888888888899999999999999999999888877643 3332 2 34
Q ss_pred hHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHH-HHhHHHHHHHHHHHHHHhccccc---CCcchh
Q 013096 142 PSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMT-FFESAALIGGQVLANWLVGIDVK---KGVVPS 217 (449)
Q Consensus 142 ~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~-~~~~~~~i~a~~lg~~l~~~~~~---~g~~~~ 217 (449)
+.+++.++++|++.+...+.... ++.|. .++++.++.++..+ ...+++.+++|.+++++.+...+ +||+..
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~-~i~~~----~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~ 383 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSV-FVEKE----VPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTM 383 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHH----CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHH
Confidence 66788899999998876555332 33433 46667788888875 45667788899999998876411 478888
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCC
Q 013096 218 STASVFLSILGIICVSRGWTENPKM 242 (449)
Q Consensus 218 f~~~~~~~~~~~~~i~~~~~e~~~~ 242 (449)
|.+.+++.+++.++..+.++|+++.
T Consensus 384 f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 384 WLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccC
Confidence 8877666555555555566776543
No 121
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.36 E-value=1e-10 Score=117.46 Aligned_cols=150 Identities=14% Similarity=0.092 Sum_probs=104.3
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhH
Q 013096 76 FGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLA 154 (449)
Q Consensus 76 ~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg 154 (449)
+.|.+.++.|.++.+.+...+...++..+++++.|+++||+|||+.+..+.+...++.+ ....++.+.+.+.-++.|++
T Consensus 242 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 242 WLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF 321 (406)
T ss_pred HHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 44566678899999999988888888899999999999999999998876555554443 44566777777777888887
Q ss_pred HHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHH
Q 013096 155 SSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICV 232 (449)
Q Consensus 155 ~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i 232 (449)
.+...+...+ +..|. .++++.++..+.......++..++|.+++++.+.. .+|...+.......+++.+..
T Consensus 322 ~~~~~~~~~~-~~~~~----~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 322 VVGGQSVLYA-LAPLF----YPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG--RSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred HHhHHHHHHH-HHHHH----cchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC--CchHHHHHHHHHHHHHHHHHH
Confidence 6655444333 22332 45556677777777777777788999999887653 244445555544444443333
No 122
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.36 E-value=3.7e-11 Score=120.53 Aligned_cols=135 Identities=13% Similarity=0.157 Sum_probs=94.7
Q ss_pred HHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHH
Q 013096 92 MLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEH 170 (449)
Q Consensus 92 g~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~ 170 (449)
+.+.....++..++.+..|+++||+|||+++..+.....+..+ ....++.+.+.+.+++.|++.+...+...+.. .+.
T Consensus 261 g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~ 339 (408)
T PRK09874 261 GMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLL-VYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHH-HHh
Confidence 3444455566777888999999999999999888777666554 45567888889999999999987766654422 221
Q ss_pred HhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHh
Q 013096 171 EKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSR 234 (449)
Q Consensus 171 ~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~ 234 (449)
.+++..++.++.......++..++|.+++++.+.. ||+..|.+.+.+.+++.+...+
T Consensus 340 ----~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~---g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 340 ----SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY---GFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred ----CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc---chhHHHHHHHHHHHHHHHHHHH
Confidence 23333445556555555666778889899887754 8889999877666665544443
No 123
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.35 E-value=1.5e-10 Score=115.97 Aligned_cols=151 Identities=11% Similarity=0.011 Sum_probs=104.5
Q ss_pred hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHH
Q 013096 73 WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICL 151 (449)
Q Consensus 73 ~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~ 151 (449)
..++.+..+++.|.+ +.+...+...++..++.++.|++.||+||||.+..+..+..++.+ ....+|.+.+++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (399)
T PRK05122 235 IATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 344555555666664 334445555566677788999999999999998888777666554 55667888888999999
Q ss_pred HhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHH
Q 013096 152 SLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIIC 231 (449)
Q Consensus 152 Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~ 231 (449)
|++.+...+...... .| ..+++..++..+..+....++..++|.+.+++.+.. ||+..|.+.....+++.+.
T Consensus 313 G~~~~~~~~~~~~~~-~~----~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~---g~~~~~~~~~~~~~~~~~~ 384 (399)
T PRK05122 313 GFGFSLVFPALGVEA-VK----RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF---GYPSIFLAAALAALLGLAL 384 (399)
T ss_pred HHhHHHHHHHHHHHH-HH----hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHH
Confidence 999987666543322 22 245566777888776666666666777788887754 8888888776665555444
Q ss_pred HH
Q 013096 232 VS 233 (449)
Q Consensus 232 i~ 233 (449)
..
T Consensus 385 ~~ 386 (399)
T PRK05122 385 TW 386 (399)
T ss_pred HH
Confidence 44
No 124
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.34 E-value=2e-09 Score=104.38 Aligned_cols=310 Identities=16% Similarity=0.091 Sum_probs=157.6
Q ss_pred HHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH--HHHhcc--hh-HHHHHHHHHHhHHHHhhhhhHHHH
Q 013096 92 MLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV--WKSITA--HP-SVWVANICLSLASSIFSFNFETWV 166 (449)
Q Consensus 92 g~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l--~~~~~s--~~-~l~~~R~l~Glg~~~~~~~~~a~~ 166 (449)
+...++..+..++.+|+.|.++|+.|+||..+.......+.+. ..++++ .+ ..++.-++..++.......-++ +
T Consensus 61 gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds-~ 139 (438)
T COG2270 61 GYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDS-M 139 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhh-H
Confidence 3445666677778899999999999988887766555544332 333333 44 4444455555555433222233 3
Q ss_pred HHHHHhhcCCh--hhHHHHHHHHHHHhHHH--HHHHHHHHH----HH-h-----cccccCCcchhHHHHHHHHHHHHHHH
Q 013096 167 AIEHEKQGQRQ--DILSDTFWLMTFFESAA--LIGGQVLAN----WL-V-----GIDVKKGVVPSSTASVFLSILGIICV 232 (449)
Q Consensus 167 v~~~~~r~~~~--~~l~~~~~~~~~~~~~~--~i~a~~lg~----~l-~-----~~~~~~g~~~~f~~~~~~~~~~~~~i 232 (449)
..+..+++.-+ ..++...+. .++.+. .+.+..+++ .- . +.. +..-|..+.+.++-.++..+-.
T Consensus 140 L~~~~~k~~~~riS~lg~~~gy--lgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 140 LPRLTTKDNMGRISGLGWALGY--LGSVILLIFVVLGFALGQQTGITIILLGLPPAD-GEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhhhcCccccCccccccccccc--ccchHHHHHHHHHHhcccccceeEEeeccCccc-cccchhHHHHHHHHHHHHHhHH
Confidence 33332221111 111111111 111111 111111111 00 0 001 2234555555444333333333
Q ss_pred HhccccCCCC--Ccch-------hhhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHH
Q 013096 233 SRGWTENPKM--AFDD-------YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFP 300 (449)
Q Consensus 233 ~~~~~e~~~~--~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~ 300 (449)
.+..++.++. +.++ ..++.++++.+++.+..+.+..+++.-+..+... ..-.+-.. + ++.+...+-.
T Consensus 217 ~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~-~~~~fg~~~~gls~~~lll~g~ 295 (438)
T COG2270 217 ILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILA-MGGVFGAADLGLSSTELLLIGI 295 (438)
T ss_pred HhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHH-HHHHHHHHHcCccHHHHHHHHH
Confidence 3444443311 1111 1235577888888776655554444333332211 12223221 1 3344444444
Q ss_pred HHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCC
Q 013096 301 SLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVP 380 (449)
Q Consensus 301 ~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p 380 (449)
...+..++|+.+.+++.+ |++.++++..+.++..+.-+...+...+.. .+..-++.+...|..+...-++..+.+|
T Consensus 296 ~~~vvA~lg~ii~g~Ld~---rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~-f~i~gll~g~s~G~~qA~SRSy~~~lvp 371 (438)
T COG2270 296 ALSVVAALGAIIAGFLDE---RFGSKPVLMIGLVILSIAALYLIFLEGELD-FWILGLLVGTSLGGAQASSRSYLARLVP 371 (438)
T ss_pred HHHHHHHHHHHHHHHHHH---HhCCceeehHHHHHHHHHHHHHHHccccHH-HHHHHHHHHHhcchHHHHHHHHHHHhCC
Confidence 445667899999999998 899888777665544332222222222221 2222245567788888889999999999
Q ss_pred CcchhHHHHhhHHHHHHHHHHHH-HHhHHhh
Q 013096 381 NELRGGMISLSLAPANAAILLFL-LLRGFYR 410 (449)
Q Consensus 381 ~~~rg~~~~~~~~~~~~~~~~~~-~~g~~~~ 410 (449)
+++-++.+|++....-.....++ +.+.+.+
T Consensus 372 ~~k~~~fFglyaltgra~S~~gp~lv~v~t~ 402 (438)
T COG2270 372 KGKEGRFFGLYALTGRAASFLGPFLVAVITQ 402 (438)
T ss_pred CccccceeehhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999998876555433333 3344433
No 125
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.34 E-value=2.6e-10 Score=113.74 Aligned_cols=146 Identities=13% Similarity=0.040 Sum_probs=103.9
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHh
Q 013096 75 VFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSL 153 (449)
Q Consensus 75 ~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Gl 153 (449)
.+.+...+|.|.++.++|.+.+.+.+...+...+.|++.||+|+|+.+..+.+...+..+ ....++.+.+++..++.|+
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 344444478899999999988888888888889999999999999999888877766544 5567889999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHH-HHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHH
Q 013096 154 ASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMT-FFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII 230 (449)
Q Consensus 154 g~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~-~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~ 230 (449)
+.+...+.... ++.+ .++++.++.++... ..++.+..++|.+++.+.+.+ |+ ..|...+.+.++++.
T Consensus 306 ~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~---g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 306 TFTVCHLAAMR-YIAA-----RPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL---GA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHH-HHHH-----CCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cH-HHHHHHHHHHHHHHH
Confidence 98876555433 2222 12333455566543 334455678899999998865 65 456655555555443
No 126
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.32 E-value=1.5e-10 Score=114.20 Aligned_cols=144 Identities=13% Similarity=-0.007 Sum_probs=102.7
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcch--hHHHHHHHHHHh
Q 013096 77 GEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAH--PSVWVANICLSL 153 (449)
Q Consensus 77 ~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~--~~l~~~R~l~Gl 153 (449)
.++..+++|.++.+.+...+...+...++.++.|+++||+|||+.+..+..+..++.+ ....++. ..++...++.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 307 (377)
T TIGR00890 228 YKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFF 307 (377)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHH
Confidence 3444578899988888888888888889999999999999999999888877776654 4444432 334556778888
Q ss_pred HHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHH
Q 013096 154 ASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILG 228 (449)
Q Consensus 154 g~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~ 228 (449)
+.+...+...+ ++.|. .++++.++.++.......++..++|.+.+++.+.. ||+..|.+..++.+++
T Consensus 308 ~~g~~~~~~~~-~~~~~----~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~---g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 308 TWGGTISLFPS-LVSDI----FGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI---GFEYTFIVTGAFALTS 374 (377)
T ss_pred HhccchhccHH-HHHHH----hhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh---chhhHHHHHHHHHHHh
Confidence 77655443322 33333 34445667777777677777888899899887755 8888888766655543
No 127
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.32 E-value=5.9e-10 Score=111.61 Aligned_cols=162 Identities=9% Similarity=-0.054 Sum_probs=106.2
Q ss_pred hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHH-hcchhHHHHHHHH
Q 013096 73 WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKS-ITAHPSVWVANIC 150 (449)
Q Consensus 73 ~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~-~~s~~~l~~~R~l 150 (449)
...+.|...+++|.++.+.+...+...++..++.+..|+++||+|||+.+..+..+..++.+ ... .++...+. -++
T Consensus 224 ~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l 301 (393)
T PRK09705 224 LIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMV 301 (393)
T ss_pred HHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHH
Confidence 34456666778899999999888888889999999999999999999998888766655543 222 22322222 245
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII 230 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~ 230 (449)
.|++.+...+....+.. + +..++++.++.++.......++..++|.+.+++.+.. + ++...|.+.+...++...
T Consensus 302 ~g~g~g~~~~~~~~~~~-~---~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~-g-~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 302 CGLGLGGAFPLCLLLAL-D---HSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS-G-NYLMDWAFHALCVVGLMI 375 (393)
T ss_pred HHHhccchHHHHHHHHH-h---hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CchHHHHHHHHHHHHHHH
Confidence 67777766555332222 1 1123445667777666666666778899999988865 1 366677766555544444
Q ss_pred HHHhccccCCCC
Q 013096 231 CVSRGWTENPKM 242 (449)
Q Consensus 231 ~i~~~~~e~~~~ 242 (449)
......||++++
T Consensus 376 ~~~~~~~~~~~~ 387 (393)
T PRK09705 376 ITLRFAPARFPQ 387 (393)
T ss_pred HHHHhccccccc
Confidence 444445666543
No 128
>PRK12382 putative transporter; Provisional
Probab=99.30 E-value=4.5e-10 Score=112.29 Aligned_cols=152 Identities=15% Similarity=0.069 Sum_probs=108.0
Q ss_pred hhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHH
Q 013096 72 LWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANIC 150 (449)
Q Consensus 72 ~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l 150 (449)
....+.+..+++.|.++. +.......++..+++++.|++.||+||||.+..+..+..++.+ ....++.+.+++.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (392)
T PRK12382 234 VIGTFVSLYFASKGWAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHHHHHhcCCchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 334455555567676543 4444555566677889999999999999999988877776654 5566788888889999
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII 230 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~ 230 (449)
.|++.+...+...+. +.| ..++++.++.++..+....++..++|.+.+++.+.. ||+..|...+.+.+++.+
T Consensus 312 ~g~~~~~~~~~~~~~-~~~----~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~---g~~~~~~~~~~~~~~~~~ 383 (392)
T PRK12382 312 TGAGCSLIFPALGVE-VVK----RVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF---GYPSVFLAGAISAVLGII 383 (392)
T ss_pred HHHHHHhHHHHHHHH-HHH----hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CchHHHHHHHHHHHHHHH
Confidence 999988766654332 222 245566777888777666677778888999888765 888899887766665554
Q ss_pred HHH
Q 013096 231 CVS 233 (449)
Q Consensus 231 ~i~ 233 (449)
...
T Consensus 384 ~~~ 386 (392)
T PRK12382 384 VTI 386 (392)
T ss_pred HHH
Confidence 443
No 129
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.29 E-value=5e-11 Score=100.00 Aligned_cols=133 Identities=13% Similarity=0.085 Sum_probs=97.4
Q ss_pred HHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCC
Q 013096 98 GFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQR 176 (449)
Q Consensus 98 ~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~ 176 (449)
..++..+++++.|+++||+|||+.+..+.....++.+ ....++++.+.+.+++.|++.+...+...+ ++.|. .+
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~----~~ 81 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA-LIADI----YP 81 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH-HHHHH----CC
Confidence 3456677789999999999999999988887777665 566789999999999999999877666544 33333 34
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhcccc
Q 013096 177 QDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTE 238 (449)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e 238 (449)
+++.++..+.......++..++|.+++++.+.. +|++.|.+.....++..+...+..||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFL---GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc---chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 444566777766677777788888888887654 78888887666555554444444454
No 130
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.26 E-value=4.9e-10 Score=113.16 Aligned_cols=150 Identities=10% Similarity=-0.040 Sum_probs=102.7
Q ss_pred HHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhh
Q 013096 81 LVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFS 159 (449)
Q Consensus 81 ~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~ 159 (449)
+.+.+.+..+.+.+.+...+...++.++.|+++||+|||+.+..+.++.++... ..+++|.+.+++.++++|++.+...
T Consensus 254 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 254 FATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred HhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 344567777888888888888888899999999999999999888887777654 5667899999999999999887655
Q ss_pred hhhHHHHHHHHHhhcCChhhHHHHHHH-HHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhcccc
Q 013096 160 FNFETWVAIEHEKQGQRQDILSDTFWL-MTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTE 238 (449)
Q Consensus 160 ~~~~a~~v~~~~~r~~~~~~l~~~~~~-~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e 238 (449)
+.... ++.|.. +++..+..++. .+....++.++++.+++++.+.. ||+..|.....+.++..++..+..++
T Consensus 334 ~~~~~-~~~~~~----~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~---G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 334 VGVFK-YITLNF----DVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI---GFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHH-HHHHHc----CccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh---CchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44332 333322 22222222221 23344566778888899988865 89999987655544443333333333
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.26 E-value=9.8e-10 Score=107.08 Aligned_cols=153 Identities=18% Similarity=0.104 Sum_probs=119.3
Q ss_pred hhhhHHHHHHHHHh-CCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchH-HHHHHHHHHHHHHH-HHHhcchhHHHHH
Q 013096 71 GLWSVFGEYELVYY-GVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKK-VCLIFFILHLFVGV-WKSITAHPSVWVA 147 (449)
Q Consensus 71 ~~~~~~~~~l~~~~-g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~-~ll~~~~~~~~~~l-~~~~~s~~~l~~~ 147 (449)
.....+.+...++. |.++.+.+.......++..++.++.|+++||+|||+ .+..+..+..++.+ ....++.+.+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 271 (352)
T cd06174 192 YGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVA 271 (352)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 33445555655554 899999999999998999999999999999999999 88888888877765 5667788899999
Q ss_pred HHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHH
Q 013096 148 NICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSIL 227 (449)
Q Consensus 148 R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~ 227 (449)
.++.|++.+...+...+ ++.|. .++++.++.++.......++..+++.+.+.+.+.. +|+..|.+.....++
T Consensus 272 ~~~~g~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~---~~~~~~~~~~~~~~i 343 (352)
T cd06174 272 LLLLGFGLGFAFPALLT-LASEL----APPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG---GYGGVFLILAALALL 343 (352)
T ss_pred HHHHHHHHhccchhHHH-HHHhh----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---CcchHHHHHHHHHHH
Confidence 99999999887766544 33332 35566778888877777788888999999888754 888889887776666
Q ss_pred HHHH
Q 013096 228 GIIC 231 (449)
Q Consensus 228 ~~~~ 231 (449)
+.+.
T Consensus 344 ~~i~ 347 (352)
T cd06174 344 AALL 347 (352)
T ss_pred HHHH
Confidence 5443
No 132
>PRK03699 putative transporter; Provisional
Probab=99.26 E-value=1.1e-09 Score=109.56 Aligned_cols=147 Identities=12% Similarity=0.031 Sum_probs=99.8
Q ss_pred hhHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHH
Q 013096 73 WSVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANIC 150 (449)
Q Consensus 73 ~~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l 150 (449)
...+.|... +++|+|+.+.+.+.+...++..++.+..|.++||+|||+++.....+..+... ....+|.+.+.+.-++
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILG 303 (394)
T ss_pred HHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 334556666 46799999999888888888899999999999999999998876655544433 3455777777777888
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILG 228 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~ 228 (449)
.|++.+..++...+ ...|..+ +.+ ++..+.......++..++|.+.+++.+.. |++..|+....+..++
T Consensus 304 ~G~~~~~~~~~~~~-~~~~~~~-~~~----~~~~g~~~~~~~~g~~i~p~~~G~l~~~~---g~~~~~~~~~~~~~~~ 372 (394)
T PRK03699 304 LGFFSSAIYTTIIT-LGSQQTK-VAS----PKLVNFILTCGTIGTMLTFVVTSPIVAHF---GLQAALLTANGLYAVV 372 (394)
T ss_pred HHHHHHHHHHHHHH-HHHHHcc-CCC----HHHHHHHHHhhhHHHHHHHHHHHHHHHHh---CchhhhhhhHHHHHHH
Confidence 88877766655433 2222211 111 22334434444567778899899888765 7888887655544443
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=99.25 E-value=8.4e-10 Score=110.32 Aligned_cols=149 Identities=13% Similarity=0.064 Sum_probs=100.8
Q ss_pred HHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHH-H-HHHhcchhHHHHHHHHHH
Q 013096 76 FGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVG-V-WKSITAHPSVWVANICLS 152 (449)
Q Consensus 76 ~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~-l-~~~~~s~~~l~~~R~l~G 152 (449)
+.++.++ ++|.|+.+.+.+.+...++..+++++.|+++||+|||++... ..+..++. . ....++.+.+.+..++.|
T Consensus 227 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~l~g 305 (390)
T PRK03545 227 YIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIA-IALLLVCLLLLLPAANSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 3444444 478999999988888888889999999999999999876443 33333322 2 334567888888899999
Q ss_pred hHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHH
Q 013096 153 LASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICV 232 (449)
Q Consensus 153 lg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i 232 (449)
++.+...+...++. .+. .+ +..+++++..+....++..+||.+++++.+.+ |++..|...+.+.+++.+..
T Consensus 306 ~~~~~~~~~~~~~~-~~~----~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~---g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 306 IAIMCIGLAMQVKV-LKL----AP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL---GLSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHhcchHHHHHHH-HHh----CC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHH
Confidence 98765555443322 222 12 23456666555555566667889999988765 88888988776666655444
Q ss_pred Hh
Q 013096 233 SR 234 (449)
Q Consensus 233 ~~ 234 (449)
.+
T Consensus 377 ~~ 378 (390)
T PRK03545 377 IL 378 (390)
T ss_pred HH
Confidence 43
No 134
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.25 E-value=5.7e-10 Score=112.57 Aligned_cols=158 Identities=15% Similarity=-0.033 Sum_probs=109.1
Q ss_pred HHHHHHHH-hCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHh
Q 013096 76 FGEYELVY-YGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSL 153 (449)
Q Consensus 76 ~~~~l~~~-~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Gl 153 (449)
+.|...++ +|.++.+.+.+.+...++..+++++.|+++||.++|+.+..+.++..++.+ ....++.+.+.+..++.|+
T Consensus 245 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 324 (417)
T PRK10489 245 LYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGY 324 (417)
T ss_pred hhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 34445555 899999999888888888889999999999998888888877766655544 4566777778888888888
Q ss_pred HHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHH
Q 013096 154 ASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVS 233 (449)
Q Consensus 154 g~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~ 233 (449)
+.+...+...+ ++. +..|++..++.++.......++..++|.+.+++.+.. |.+..+...+...++...+..
T Consensus 325 ~~~~~~~~~~~-~~~----~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~---g~~~~~~~~~~~~~~~~~~~~ 396 (417)
T PRK10489 325 LSAISSLLQYT-LLQ----TQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM---TPVASASASGFGLLIIGVLLL 396 (417)
T ss_pred HHHHHHHHHHH-HHH----hhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh---chhhHHHHHHHHHHHHHHHHH
Confidence 87754443222 222 2245666778888777666677778889899888755 666666654444333333333
Q ss_pred hccccCCC
Q 013096 234 RGWTENPK 241 (449)
Q Consensus 234 ~~~~e~~~ 241 (449)
...+|.++
T Consensus 397 ~~~~~~~~ 404 (417)
T PRK10489 397 LVLGELRR 404 (417)
T ss_pred Hhcccccc
Confidence 34455544
No 135
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.25 E-value=2.3e-09 Score=106.89 Aligned_cols=149 Identities=11% Similarity=0.024 Sum_probs=101.8
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhH
Q 013096 75 VFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVWKSITAHPSVWVANICLSLA 154 (449)
Q Consensus 75 ~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~~~~~s~~~l~~~R~l~Glg 154 (449)
.+.|...++.|.++++++.+.+...+...+++++.|+++||+|||+++..+..+..++++... +.......+++.|++
T Consensus 221 ~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~ 298 (381)
T PRK03633 221 GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQAAMAPALFILGAA 298 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHH
Confidence 345555577899999999888888888889999999999999999998887777666543222 223445567888887
Q ss_pred HHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHH
Q 013096 155 SSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVS 233 (449)
Q Consensus 155 ~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~ 233 (449)
.....|...++. .|. .++++.+...+.......++..++|.+++++.+++ ++++.|.+.+.+.++.....+
T Consensus 299 ~~~~~p~~~~~~-~~~----~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~---g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 299 GFTLYPVAMAWA-CEK----VEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY---SDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHhHHHHHHHHH-Hcc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CccHHHHHHHHHHHHHHHHHH
Confidence 766666655432 222 23333444444444455667788999999998866 788888876666555544333
No 136
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.24 E-value=2.6e-08 Score=100.83 Aligned_cols=309 Identities=14% Similarity=0.066 Sum_probs=168.6
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhC----chHH-HHHHHHHHHHHHH-HHH----hcchhHHH
Q 013096 76 FGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIG----QKKV-CLIFFILHLFVGV-WKS----ITAHPSVW 145 (449)
Q Consensus 76 ~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~G----Rr~~-ll~~~~~~~~~~l-~~~----~~s~~~l~ 145 (449)
..|.+.+++|++++|.+...+...++..+ -|+.|.++|.+- |||. ++++.++.+++.+ ++. .++.....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 34555678999999999888888887766 789999999984 5555 4556555544332 332 23566666
Q ss_pred HHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHH
Q 013096 146 VANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLS 225 (449)
Q Consensus 146 ~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~ 225 (449)
+.-++..+|.+..-...++.+ .|..+|+ +.+ .++..+.......++.+++..+++.+.+.. +++..|.+...+.
T Consensus 91 ~~l~la~~g~a~~DV~aDa~v-vE~~~~~-p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~---~~~~~f~i~~~~~ 164 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALV-VELARRE-PES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSF---GPQGVFLISAALP 164 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHH-HHHhhcC-Cch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcC---CCeEEehHHHHHH
Confidence 677788888877766677644 4443333 333 444555444444556667777777777654 6777887765554
Q ss_pred HHHHHHHHhccccCCCCCc-------ch----------hhhhhhHhhhcChhHHHHHHH-HHHHHHHHHHHHHHhhhhh-
Q 013096 226 ILGIICVSRGWTENPKMAF-------DD----------YRTSFFTYIFGDKRIWLLVLA-QACLQFSIALFWILWAPTL- 286 (449)
Q Consensus 226 ~~~~~~i~~~~~e~~~~~~-------~~----------~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~- 286 (449)
.+..+......+|.+.+++ ++ ++...+++.+++|.++...+. ..+ + ...|..
T Consensus 165 ~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~-----~----~~~~~~~ 235 (433)
T PF03092_consen 165 LLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFF-----F----NLPPSIS 235 (433)
T ss_pred HHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-----H----HhccCCC
Confidence 4443333333343111110 00 011223445555655544331 111 1 111111
Q ss_pred ------cc-C---C---CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHH-Hhc-cc-c--
Q 013096 287 ------VA-D---G---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI-IAY-DY-Q-- 348 (449)
Q Consensus 287 ------~~-~---~---~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~-~~~-~~-~-- 348 (449)
.. + + ++...|.+.....++.++|..+..+... +.+.|++.....++..+.-+. ... .. +
T Consensus 236 ~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~---~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~ 312 (433)
T PF03092_consen 236 SASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFS---NWSWRRIFVVTTLVSVLASLFDLLLVTRWNLD 312 (433)
T ss_pred CccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHHhcccEEEEEEEeee
Confidence 11 1 1 1222455554555677888888887776 456666655443333221110 000 00 0
Q ss_pred ----hhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHH
Q 013096 349 ----EIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFL 403 (449)
Q Consensus 349 ----~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~ 403 (449)
+.+..+..-.+..+..++.+-....+.+|..|+...|+.+++.....|++...+-
T Consensus 313 ~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~ 371 (433)
T PF03092_consen 313 LGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSS 371 (433)
T ss_pred eCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 0011111112334444444444456678999999999999998888887654343
No 137
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.23 E-value=1.1e-09 Score=109.35 Aligned_cols=159 Identities=16% Similarity=0.043 Sum_probs=99.6
Q ss_pred HHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHH-HhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH-H----
Q 013096 65 LASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGF-SAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK-S---- 137 (449)
Q Consensus 65 l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~-~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~-~---- 137 (449)
+....+.....+.+...+|.|.+++++|.+..... ....++..+.|++.||+|+||.+..+..+.+...+ .. .
T Consensus 219 l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 298 (390)
T TIGR02718 219 LSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFW 298 (390)
T ss_pred HHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33333433334455556789999999998877654 45566678999999999999998877665533222 11 1
Q ss_pred -hcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcch
Q 013096 138 -ITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVP 216 (449)
Q Consensus 138 -~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~ 216 (449)
.++.+.++..-.+++++.+...+...+....+ .. +++..++.++..+....++..++|.+++++.+.. |++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~---~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~---G~~~ 371 (390)
T TIGR02718 299 LAPGIAVAWSCSAFGSLITGITSVAIYTAFMRF-AG---DGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF---GYAG 371 (390)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hC---cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccHH
Confidence 23444455555666666665554443322222 11 1133455666666666777788899999888765 7888
Q ss_pred hHHHHHHHHHHHHH
Q 013096 217 SSTASVFLSILGII 230 (449)
Q Consensus 217 ~f~~~~~~~~~~~~ 230 (449)
.|.....+.+++.+
T Consensus 372 ~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 372 GFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877666555543
No 138
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.22 E-value=3.6e-09 Score=109.11 Aligned_cols=161 Identities=13% Similarity=0.144 Sum_probs=98.5
Q ss_pred hHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH----HHHhcchhHHHHHH
Q 013096 74 SVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV----WKSITAHPSVWVAN 148 (449)
Q Consensus 74 ~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l----~~~~~s~~~l~~~R 148 (449)
..+.|... +++|.++.+.+.......++..++.+..|+++||+|||+++..+.+...+.++ ...+++...++++|
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL 349 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 34555555 46799888777666777777888889999999999999998877665443222 12235677888899
Q ss_pred HHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHH
Q 013096 149 ICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILG 228 (449)
Q Consensus 149 ~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~ 228 (449)
++.|++.+...+... .+++|. +|.+..+...+........+..++|.+.+++.+.. .+|+.+++...+..+++
T Consensus 350 ~~~g~~~~~~~g~~~-~~~~~~----~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~--~~~~~~~~~~~~~~~i~ 422 (490)
T PRK10642 350 LMLAVILNCFTGVMA-STLPAM----FPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST--QNLMMPAYYLMVVAVIG 422 (490)
T ss_pred HHHHHHHHHHHHHHH-HHHHHH----CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHH
Confidence 999887665444332 234443 34444444444322122233445677777766543 24666766555454444
Q ss_pred HHHHHhccccCCCC
Q 013096 229 IICVSRGWTENPKM 242 (449)
Q Consensus 229 ~~~i~~~~~e~~~~ 242 (449)
.+... ..||+++.
T Consensus 423 ~~~~~-~~pes~~~ 435 (490)
T PRK10642 423 LITGV-TMKETANR 435 (490)
T ss_pred HHHHH-HhccccCC
Confidence 44333 45887654
No 139
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=1e-10 Score=106.88 Aligned_cols=342 Identities=12% Similarity=0.068 Sum_probs=170.6
Q ss_pred hhhhHHHHHHHHHHHHHhh----hhhHHHHHHH--HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh-CchHHHH-H
Q 013096 53 VPFQRNFLLLFSLASVMEG----LWSVFGEYEL--VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI-GQKKVCL-I 124 (449)
Q Consensus 53 ~~~~~~~~~~~~l~~~~~~----~~~~~~~~l~--~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~-GRr~~ll-~ 124 (449)
.+.-+|++.+.+....+.+ .+.|-.-..+ ++.+++.++..++++.+..+-.+...++|.+.||. |-|-.-+ .
T Consensus 37 S~l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~ 116 (459)
T KOG4686|consen 37 SALGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIIL 116 (459)
T ss_pred hhhhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHH
Confidence 3555666666554444432 2345332332 35666667788889999888888788999999974 4433322 2
Q ss_pred HHHHHH---HHHHHHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHH--hhcCChhhHHHHHHHHHHHhHHHH----
Q 013096 125 FFILHL---FVGVWKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHE--KQGQRQDILSDTFWLMTFFESAAL---- 195 (449)
Q Consensus 125 ~~~~~~---~~~l~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~--~r~~~~~~l~~~~~~~~~~~~~~~---- 195 (449)
++.++. +...-...+++|.+..+|++.|+|.-.. .+.+.. .-.+++++++-+++......-++.
T Consensus 117 ~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESl-------AVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf 189 (459)
T KOG4686|consen 117 CIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESL-------AVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNF 189 (459)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhh-------hhhhcceeEEEecCccccchhhHHHHHHHhhceeee
Confidence 322222 1112235689999999999999986322 222221 123566777777775332221111
Q ss_pred HHHHHHHHHHhcccccCCcc-----hhHHH-HHHHHHHHHHHHHhccccCCCCCcchh-------hhhhhHhhhc-ChhH
Q 013096 196 IGGQVLANWLVGIDVKKGVV-----PSSTA-SVFLSILGIICVSRGWTENPKMAFDDY-------RTSFFTYIFG-DKRI 261 (449)
Q Consensus 196 i~a~~lg~~l~~~~~~~g~~-----~~f~~-~~~~~~~~~~~i~~~~~e~~~~~~~~~-------~~~~~~~l~~-~~~~ 261 (449)
.+-|.+.......+++.|-. ..|-. .....+++... ..+.+.+. |+.-+ +...+.++.. .|.+
T Consensus 190 ~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~--lg~~D~rA-erilh~e~g~~Ge~pkLtdv~~f~ppf 266 (459)
T KOG4686|consen 190 LLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALS--LGLSDDRA-ERILHLEEGFLGEEPKLTDVNTFYPPF 266 (459)
T ss_pred eecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHH--hhhhhhHH-HHHHhhhcCcccCCcccccccccCccH
Confidence 12233333222211111100 01110 00111122111 11211110 10000 0001112211 2677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHH-H
Q 013096 262 WLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVL-G 337 (449)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~-~ 337 (449)
|.+.+...+...+.+-|+. ..|.+.++ | ++.+.+-+.+..-.-..+-+...+.++| +.|+.-.++....+. -
T Consensus 267 w~~~iicv~yyva~fPFi~-lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~D---k~G~n~~wv~~a~~~tl 342 (459)
T KOG4686|consen 267 WVLVIICVLYYVAWFPFIT-LGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISD---KYGFNLWWVASACILTL 342 (459)
T ss_pred HHHHHHHHHHHHHHHHHhh-hhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHh---hhcceehhHHHHHHHHH
Confidence 7777666665555555543 35655554 2 3444454444333344566778889999 566554444322111 1
Q ss_pred HHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH-hHHhhh
Q 013096 338 FVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRN 411 (449)
Q Consensus 338 ~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~ 411 (449)
.+-....++..++ ...+++.+....+...+.+..+...+|+++-||++|..+...|++....++. |.+.++
T Consensus 343 ~~H~~l~Ft~lsP---y~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 343 LGHSGLFFTFLSP---YTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred HHhhhHHhhhccH---HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 1112222222222 2344444554444444455566778899999999999999999986555554 433344
No 140
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.16 E-value=2.2e-09 Score=106.59 Aligned_cols=143 Identities=15% Similarity=0.123 Sum_probs=93.6
Q ss_pred hhHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHH---HHHH--hcchhHHHH
Q 013096 73 WSVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVG---VWKS--ITAHPSVWV 146 (449)
Q Consensus 73 ~~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~---l~~~--~~s~~~l~~ 146 (449)
...+.+... +++|.++.+.+.......+...++.++.|+++||+|||+.++....+..+.+ +... .++.+.+..
T Consensus 238 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (394)
T TIGR00883 238 ITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFF 317 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 345556655 4688999999988888888888999999999999999998775544433322 1222 246777778
Q ss_pred HHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHH-HHHHhHHHHHHHHHHHHHHhcccccCC-cchhHHHHHH
Q 013096 147 ANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWL-MTFFESAALIGGQVLANWLVGIDVKKG-VVPSSTASVF 223 (449)
Q Consensus 147 ~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~-~~~~~~~~~i~a~~lg~~l~~~~~~~g-~~~~f~~~~~ 223 (449)
..++.|++.+...+...+ ++.|.. |++..++.++. ....+.++..++|.+++++.+.. | |+..++..+.
T Consensus 318 ~~~~~g~~~~~~~~~~~~-~~~~~~----p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~---g~~~~~~~~~~~ 388 (394)
T TIGR00883 318 LVLGLALIGGMYTGPMGS-FLPELF----PTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT---GDWYAIGYYLAA 388 (394)
T ss_pred HHHHHHHHHHHHhhhHHH-HHHHhC----CccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc---CcchhHHHHHHH
Confidence 888899888776665543 444442 22223333333 23334455667888888888765 4 6666555443
No 141
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.14 E-value=1.6e-08 Score=101.62 Aligned_cols=146 Identities=10% Similarity=0.043 Sum_probs=100.8
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHH-HHHHHHHHHH-HHH-----hcchhHHHHH
Q 013096 75 VFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLI-FFILHLFVGV-WKS-----ITAHPSVWVA 147 (449)
Q Consensus 75 ~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~-~~~~~~~~~l-~~~-----~~s~~~l~~~ 147 (449)
.+.|...+++|.++.+.+.+.....++..++.+..|+++||+|||+.... +.+...+.++ +.. .++.+.+++.
T Consensus 243 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~ 322 (402)
T TIGR00897 243 VFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALII 322 (402)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHH
Confidence 34555557899999998887777778889999999999999999987642 2222333222 211 2466777788
Q ss_pred HHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHH
Q 013096 148 NICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSIL 227 (449)
Q Consensus 148 R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~ 227 (449)
.++.|++.+...+. .+ ...|. ++++.++.++..+....++..++|.+++.+.+.. ||...|++.+++.++
T Consensus 323 ~~~~G~~~~~~~~~-~~-~~~~~-----~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~---g~~~~~~~~a~~~~i 392 (402)
T TIGR00897 323 AIALGIFLAGYVPL-AA-VFPTL-----APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF---GAIGVVWIFAALYVV 392 (402)
T ss_pred HHHHHHHHHHHHHH-HH-HHHhh-----CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---chHHHHHHHHHHHHH
Confidence 88899888765433 22 33332 2234677788777777777788999999988865 788888877666555
Q ss_pred HHH
Q 013096 228 GII 230 (449)
Q Consensus 228 ~~~ 230 (449)
..+
T Consensus 393 ~~~ 395 (402)
T TIGR00897 393 SAF 395 (402)
T ss_pred HHH
Confidence 443
No 142
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.13 E-value=5.3e-08 Score=98.42 Aligned_cols=284 Identities=13% Similarity=0.103 Sum_probs=154.8
Q ss_pred HHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhHHHHhhhhhH-HHHHHHHHhhcCCh
Q 013096 99 FSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVWKSITAHPSVWVANICLSLASSIFSFNFE-TWVAIEHEKQGQRQ 177 (449)
Q Consensus 99 ~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~~~~~s~~~l~~~R~l~Glg~~~~~~~~~-a~~v~~~~~r~~~~ 177 (449)
.+...+.++..|.++||+|||..+........+..++...+. |++++ +.|+..+.....+. -.+++|. ...
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~---~~~l~g~~~~~~s~~~a~vadi----s~~ 143 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL---LLGLSGGFSAIFSVGFAYVADI----SSE 143 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh---hcccccchhhhhhhhhhheeec----cch
Confidence 456678889999999999999999988777666555444444 34433 55554432211111 1133332 223
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccCCCCCcch-----------
Q 013096 178 DILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDD----------- 246 (449)
Q Consensus 178 ~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~~~~~~----------- 246 (449)
+.....++........+..++|.+++.+.... |.-.+|.++.+...+.....+...||+..+++++
T Consensus 144 ~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~---~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~ 220 (463)
T KOG2816|consen 144 EERSSSIGLLSGTFGAGLVIGPALGGYLVKFL---GIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGS 220 (463)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc---CchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCc
Confidence 34445555555444455667888888887765 6667898888888888777777788876542211
Q ss_pred ----hhhhhhHhhhc--C-hhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHH-H
Q 013096 247 ----YRTSFFTYIFG--D-KRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFP-W 315 (449)
Q Consensus 247 ----~~~~~~~~l~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~-~ 315 (449)
+..+.++...+ + |..+.+.+...+....-..-..--.+.++.. + +..+++...+.......++..+.. .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~ 300 (463)
T KOG2816|consen 221 LDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPL 300 (463)
T ss_pred ccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222332222 2 3333333222111100000000001122221 1 234455444444444444444443 4
Q ss_pred HhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHH
Q 013096 316 LISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPA 395 (449)
Q Consensus 316 l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~ 395 (449)
+.. .++.++.+..++..-.+.....++..+ .|... .-.......+...|+..+..+...++|.||++.++.....
T Consensus 301 l~~---~l~~~~~i~lGl~~~~~~~~~~af~~~-~w~~~-~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~ 375 (463)
T KOG2816|consen 301 LSS---ILGEKRLISLGLLSEFLQLLLFAFATE-TWMMF-AAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIE 375 (463)
T ss_pred HHH---HHhhhhHhhHHHHHHHHHHHHHHHhcc-chhhh-HHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHH
Confidence 443 455566555555444444444444432 23322 2233445566778999999999999999999999887766
Q ss_pred HHH
Q 013096 396 NAA 398 (449)
Q Consensus 396 ~~~ 398 (449)
.+.
T Consensus 376 ~l~ 378 (463)
T KOG2816|consen 376 GLS 378 (463)
T ss_pred HHh
Confidence 654
No 143
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.13 E-value=8.2e-09 Score=110.13 Aligned_cols=137 Identities=13% Similarity=0.029 Sum_probs=101.3
Q ss_pred HHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhh
Q 013096 95 LCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQ 173 (449)
Q Consensus 95 ~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r 173 (449)
..+..++..++.++.|+++||+|||++++.+.++.+++++ ..+.++...+++.+++.|+..+...+...+ +++|.
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a-~~aEl--- 676 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDV-LTVEL--- 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH---
Confidence 3444567778889999999999999999999888888765 667778888888899888877766655433 44544
Q ss_pred cCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccCCC
Q 013096 174 GQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPK 241 (449)
Q Consensus 174 ~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~ 241 (449)
+|.+..++.++.......++.+++|.+++.+... +...+|.+.+++.+++.++.. .+||+++
T Consensus 677 -~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~----~~~~pf~i~a~~lll~~ll~~-~LPET~~ 738 (742)
T TIGR01299 677 -YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI----TKAAPILFASAALACGGLLAL-KLPDTRG 738 (742)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHH-hCCCCcc
Confidence 5666677888888878888889999998877653 334678776666555555444 4588765
No 144
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.11 E-value=1e-08 Score=102.27 Aligned_cols=141 Identities=6% Similarity=-0.008 Sum_probs=91.8
Q ss_pred HHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH-HhcchhHHHHHHHHHHhH
Q 013096 78 EYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK-SITAHPSVWVANICLSLA 154 (449)
Q Consensus 78 ~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~-~~~s~~~l~~~R~l~Glg 154 (449)
++.++ .+|.++.+.+...+...++..++.++.|+++||+|||+.+..+..+.+++.+ .. ..++.+..++..++.+.+
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g 302 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAG 302 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33444 5899999999888888888999999999999999999999888777666553 32 344555666666666666
Q ss_pred HHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHH
Q 013096 155 SSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSI 226 (449)
Q Consensus 155 ~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~ 226 (449)
.....+........ +..+++..+...+ .....++..+||.+++++.+.. .+|+..+.+.+...+
T Consensus 303 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~g~~~Gp~~~G~l~~~~--~~~~~~~~~~~~~~~ 366 (382)
T PRK10091 303 LFALSAPLQILLLQ----NAKGGELLGAAGG--QIAFNLGSAIGAYCGGMMLTLG--LAYNYVALPAALLSF 366 (382)
T ss_pred HHhhhHHHHHHHHH----hCCcchHHHHHHH--HHHHHHHHHHHHHHhHHHHHcc--cCcchHHHHHHHHHH
Confidence 54433332222221 1223333443322 2334566778888899888753 377788887654433
No 145
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.08 E-value=4.8e-09 Score=107.13 Aligned_cols=146 Identities=18% Similarity=0.085 Sum_probs=101.9
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh--CchHHHHHH--HHHHHHHHH-HHHhcchhHHHHHHHH
Q 013096 76 FGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI--GQKKVCLIF--FILHLFVGV-WKSITAHPSVWVANIC 150 (449)
Q Consensus 76 ~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~--GRr~~ll~~--~~~~~~~~l-~~~~~s~~~l~~~R~l 150 (449)
+.+...+++|.++.+.+.+.+...++..+++++.|.++||. ++|+..+.. .+..++..+ +...++++.+++.+++
T Consensus 263 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~ 342 (455)
T TIGR00892 263 FLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIF 342 (455)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 44555578899999999888888888888899999999984 344443333 233333333 4567889999999999
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILG 228 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~ 228 (449)
.|++.+...+...+ .+.|. .++++.++.++..+....++.+++|.+++++.+.. .+|+..|++.++..+++
T Consensus 343 ~G~~~g~~~~~~~~-~~~~~----~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~--g~~~~~f~~~~~~~li~ 413 (455)
T TIGR00892 343 FGLSFGSVGALLFE-VLMDL----VGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDAT--KNYKYIFYASGSIVVSA 413 (455)
T ss_pred HHHHhchHHHHHHH-HHHHH----hhHHHHhhHHhHHHHHHHHHHHccccceeeeehhc--CCcchHHHHhhHHHHHH
Confidence 99998876665444 33333 24445667777777777778888999999887654 15788888765544444
No 146
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.08 E-value=1.4e-08 Score=101.98 Aligned_cols=122 Identities=7% Similarity=-0.142 Sum_probs=85.0
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHH-----hcchhHHHHHHHHHHhHH
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKS-----ITAHPSVWVANICLSLAS 155 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~-----~~s~~~l~~~R~l~Glg~ 155 (449)
+++|.++.+.+........+..++.++.|+++||+|||+.+..+.++..++.+ ... .++.+.+++.-++.|+|.
T Consensus 244 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 323 (406)
T PRK15402 244 SGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGI 323 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHH
Confidence 46899999988777766677788889999999999999998887766655433 222 235667788889999998
Q ss_pred HHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc
Q 013096 156 SIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 156 ~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~ 209 (449)
+...+...... .. . .+++.++..+..+.....+..+|+.+++++.+..
T Consensus 324 ~~~~~~~~~~~-~~-~----~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 324 GLANAGLYRLT-LF-S----SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred HHHhhhHHHHH-hh-h----ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 87665543321 11 1 1134556677666666666677888888876643
No 147
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.07 E-value=2.9e-08 Score=102.40 Aligned_cols=144 Identities=15% Similarity=0.140 Sum_probs=91.0
Q ss_pred HHhCCChHHHHHHH-HHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH----HHHh-cchhHHHHHHHHHHhHH
Q 013096 82 VYYGVAKEQMMLLL-CAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV----WKSI-TAHPSVWVANICLSLAS 155 (449)
Q Consensus 82 ~~~g~s~~~ig~l~-~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l----~~~~-~s~~~l~~~R~l~Glg~ 155 (449)
+++|.|+++++.+. ..+.++..++.++.|+++||+||||.+..+.++..+..+ .... ++.+.+...-+++.+..
T Consensus 251 ~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~ 330 (491)
T PRK11010 251 RGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCG 330 (491)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 56899999999887 466778889999999999999999988776555444332 1222 45555555555655444
Q ss_pred HHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHH
Q 013096 156 SIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVS 233 (449)
Q Consensus 156 ~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~ 233 (449)
+...++..+ +..+..++.++.. .++..+....++.++++.+.+++.+.. ||+..|.+..++.+.+.+...
T Consensus 331 g~~~~~~~a-~~~~l~~~~~~~t----~~gl~~s~~~lg~~~~~~~~G~l~~~~---G~~~~f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 331 GMGTAAFVA-LLMTLCNKSFSAT----QFALLSALSAVGRVYVGPVAGWFVEAH---GWPTFYLFSVAAAVPGLLLLL 400 (491)
T ss_pred HHHHHHHHH-HHHHHcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh---ChHHHHHHHHHHHHHHHHHHH
Confidence 443433322 3333434444433 344444444555566666788887765 888888877666666544443
No 148
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.07 E-value=1.6e-08 Score=100.10 Aligned_cols=148 Identities=11% Similarity=0.009 Sum_probs=90.3
Q ss_pred hHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchH--HHHHH---HHHHHHHHHHH----HhcchhH
Q 013096 74 SVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKK--VCLIF---FILHLFVGVWK----SITAHPS 143 (449)
Q Consensus 74 ~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~--~ll~~---~~~~~~~~l~~----~~~s~~~ 143 (449)
..+.+... +++|.|+.+.+.+.+...+...++.++.|+++||+|||+ ..... .....+.++.. ..++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (399)
T TIGR00893 235 LTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYA 314 (399)
T ss_pred HHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 34444444 468999999998888888888999999999999999997 21111 11111111111 1224444
Q ss_pred HHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCC-cchhHHHHH
Q 013096 144 VWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKG-VVPSSTASV 222 (449)
Q Consensus 144 l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g-~~~~f~~~~ 222 (449)
....-.+.+.+.+ ..+...+ ++.|. .++++.++.++.......++..++|.+.+++.+.. | |+..|.+..
T Consensus 315 ~~~~~~~~~~~~~-~~~~~~~-~~~~~----~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~---g~~~~~~~~~~ 385 (399)
T TIGR00893 315 ALALVALGFFGLG-AGAIGWA-LISDN----APGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT---GSFAGALMVVA 385 (399)
T ss_pred HHHHHHHHHhchh-hhhHHHH-HHHhh----cChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC---CchhHHHHHHH
Confidence 4444444444443 3333322 33333 45556677888777777777888899999888754 5 777787765
Q ss_pred HHHHHHHH
Q 013096 223 FLSILGII 230 (449)
Q Consensus 223 ~~~~~~~~ 230 (449)
...+++.+
T Consensus 386 ~~~~~~~~ 393 (399)
T TIGR00893 386 ALALIGAL 393 (399)
T ss_pred HHHHHHHH
Confidence 55544433
No 149
>PRK09952 shikimate transporter; Provisional
Probab=99.06 E-value=6e-08 Score=98.63 Aligned_cols=152 Identities=8% Similarity=-0.040 Sum_probs=89.2
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHH---h-cchhHHHHHHHHHHhHHH
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKS---I-TAHPSVWVANICLSLASS 156 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~---~-~s~~~l~~~R~l~Glg~~ 156 (449)
+++|.++.+...+.........++.++.|+++||+||||+++.+.++..++.+ +.. . ++.+.+++.-++.|++.+
T Consensus 279 ~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 358 (438)
T PRK09952 279 QNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHD 358 (438)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 46788887654444444455667788999999999999998877665444332 211 2 234444555666677776
Q ss_pred HhhhhhHHHHHHHHHhhcCChhhHHHHHHHH-HHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhc
Q 013096 157 IFSFNFETWVAIEHEKQGQRQDILSDTFWLM-TFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRG 235 (449)
Q Consensus 157 ~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~-~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~ 235 (449)
...+...+ +++|. +|.+..+...+.. ..+..++..++|.+.+++.+.. +.+|+.++.......+++.+... .
T Consensus 359 ~~~~~~~~-~~~e~----~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~-~~~~~~~~~~~~~~~~i~~v~~~-~ 431 (438)
T PRK09952 359 MVVCVQQP-MFTEM----FGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF-GGSWHSVAIYLLAGCLISAMTAL-L 431 (438)
T ss_pred HHHHHHHH-HHHHH----CCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHH-H
Confidence 55544433 34444 2333333333332 2333355667888888887643 23577777766666555544333 3
Q ss_pred cccCC
Q 013096 236 WTENP 240 (449)
Q Consensus 236 ~~e~~ 240 (449)
++|++
T Consensus 432 ~~~~~ 436 (438)
T PRK09952 432 MKDNQ 436 (438)
T ss_pred ccccc
Confidence 46654
No 150
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.05 E-value=2.4e-08 Score=100.27 Aligned_cols=146 Identities=11% Similarity=0.060 Sum_probs=88.9
Q ss_pred HHHHhCCChHHHHHHHHH-HHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-H---HHh-cchhHHHHHHHHHHh
Q 013096 80 ELVYYGVAKEQMMLLLCA-GFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-W---KSI-TAHPSVWVANICLSL 153 (449)
Q Consensus 80 l~~~~g~s~~~ig~l~~~-~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~---~~~-~s~~~l~~~R~l~Gl 153 (449)
+.+++|.++++++.+... +..+..++.++.|++.||+|||+.+..+.....+.++ . ... ++.+.+.+.-+++++
T Consensus 236 l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 315 (402)
T PRK11902 236 LIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENL 315 (402)
T ss_pred HHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 345689999999987654 4556778889999999999999998777666555432 1 233 456666665555444
Q ss_pred HHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHH
Q 013096 154 ASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVS 233 (449)
Q Consensus 154 g~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~ 233 (449)
..+.......+. .....++.++.++.+. .+...+++.+.++.+++++.+.. ||+..|.+.+.+.+++.+++.
T Consensus 316 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~G~l~~~~---G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 316 CGGMGTAAFVAL-LMALCNRSFSATQYAL----LSALASVGRVYVGPTSGYLVEAY---GWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHH-HHHhcCCCCcHHHHHH----HHHHHHHHHHHHHHHHHHHHHHh---ChHHHHHHHHHHHHHHHHHHH
Confidence 433332222211 1112233445444432 22223344444556788888765 888889888777766655444
No 151
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.05 E-value=1.9e-08 Score=98.71 Aligned_cols=128 Identities=15% Similarity=0.055 Sum_probs=96.4
Q ss_pred HHHHHHHH-hCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhc-chhHHHHHHHHHH
Q 013096 76 FGEYELVY-YGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSIT-AHPSVWVANICLS 152 (449)
Q Consensus 76 ~~~~l~~~-~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~-s~~~l~~~R~l~G 152 (449)
..|...++ +|.++.+.+.+.....++..++.++.|++.||+|||+.+..+..+.++... ....+ +.+.+.+..++.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIG 312 (365)
T ss_pred HhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHH
Confidence 34444444 799999999888888888889999999999999999998887666665554 44455 4888889999999
Q ss_pred hHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Q 013096 153 LASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGI 208 (449)
Q Consensus 153 lg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~ 208 (449)
++.+...+...+ ++.|. .++++.++..+.......++..++|.+++++.+.
T Consensus 313 ~~~~~~~~~~~~-~~~~~----~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 313 VGYGPINVPQGT-LLQRR----VPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHH-HHHHh----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998876665443 33332 4556677888887777777777888888887653
No 152
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.03 E-value=6.2e-08 Score=97.09 Aligned_cols=138 Identities=13% Similarity=0.003 Sum_probs=90.9
Q ss_pred HHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHH-HH-HHHhcchhHHHHHHHHHHhHHH
Q 013096 79 YELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFV-GV-WKSITAHPSVWVANICLSLASS 156 (449)
Q Consensus 79 ~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~-~l-~~~~~s~~~l~~~R~l~Glg~~ 156 (449)
.+.+++|.++.+.+.++....++..++.++.|++.||.+ |+.++.+..+.... .+ ....++.+.+.+..++.|++.+
T Consensus 242 ~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~ 320 (394)
T PRK10213 242 VYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFA 320 (394)
T ss_pred HHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 334578999999998888777888888999999999964 45444444443332 33 2345677888888899999888
Q ss_pred HhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHH
Q 013096 157 IFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSI 226 (449)
Q Consensus 157 ~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~ 226 (449)
...+..++++ .+. .+ ++.++..+.......++..+|+.+++++.+.. |++..+.......+
T Consensus 321 ~~~~~~~~~~-~~~----~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~---g~~~~~~~~~~~~~ 381 (394)
T PRK10213 321 LVPVGWSTWI-TRS----LA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNI---GLTSPLMLSGTLML 381 (394)
T ss_pred hhhHHHHHHH-HHH----Cc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---ChhhHHHHHHHHHH
Confidence 7666655433 222 22 12333444444445566778899999988754 77777777654433
No 153
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.02 E-value=3.5e-08 Score=96.54 Aligned_cols=215 Identities=13% Similarity=-0.011 Sum_probs=124.8
Q ss_pred eecCCccchhHHHHHHHH-HHHHHHhhcccccCCCCCCCCCCCCCCCcchhhhHHHH----HHHHHHHHHhhhhhHHH-H
Q 013096 5 IESPFGNRVHFLYIFIFL-SCFFSIFLLPSKSSSSSSSSLFDHSNSSSFVPFQRNFL----LLFSLASVMEGLWSVFG-E 78 (449)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~-~ 78 (449)
-|...||.+..+...+.+ +.+..+..+| ++. ...++. ......++-+++.-+ ...++...+....-.|+ |
T Consensus 161 g~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~-~~~~~~-~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P 236 (394)
T COG2814 161 GQLFGWRATFLAIAVLALLALLLLWKLLP--PSE-ISGSLP-GPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRP 236 (394)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc-CCCCCC-cchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHH
Confidence 467789998888776666 5555666667 111 111110 111112233332222 22223333322222233 3
Q ss_pred HHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH--HHHhcchhHHHHHHHHHHhHHH
Q 013096 79 YELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV--WKSITAHPSVWVANICLSLASS 156 (449)
Q Consensus 79 ~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l--~~~~~s~~~l~~~R~l~Glg~~ 156 (449)
.+.+..|+|+++++++...+-++..++....|+++|| +.|+.+.....+..+..+ ....++.+..++.-++.|++.+
T Consensus 237 ~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~ 315 (394)
T COG2814 237 FLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFS 315 (394)
T ss_pred HHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhh
Confidence 4445789999999999888889999999999999999 999998887777666543 3344566666666677666654
Q ss_pred HhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHH
Q 013096 157 IFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVS 233 (449)
Q Consensus 157 ~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~ 233 (449)
... +.+. .+..+ . .+|....+.+.......++..+|..+|+.+.+++ |+....+.++.+.+++..+..
T Consensus 316 ~~~---~~~~-~~~a~-~-~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~---g~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 316 PAL---QGLQ-TRLAR-L-APDAADLAGSLNVAAFNLGIALGAALGGLVLDAL---GYAATGWVGAALLLLALLLAL 383 (394)
T ss_pred hhh---hHHH-HHhcc-c-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHH
Confidence 332 2222 22222 1 1122233444444444444456677788887765 888888888777666655443
No 154
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.02 E-value=1.2e-08 Score=104.04 Aligned_cols=158 Identities=12% Similarity=-0.072 Sum_probs=98.7
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH---H--hc------chh
Q 013096 75 VFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK---S--IT------AHP 142 (449)
Q Consensus 75 ~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~---~--~~------s~~ 142 (449)
.+.+.+.+++|.+..+.+.......+...++.++.|+++||+|||+.+..+.++..++.+ .. . .+ +..
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNV 384 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHH
Confidence 344556678899987777777777788888899999999999999999888766655543 22 1 11 222
Q ss_pred HHHHHHHHHHhHHHHh-hhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHH
Q 013096 143 SVWVANICLSLASSIF-SFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTAS 221 (449)
Q Consensus 143 ~l~~~R~l~Glg~~~~-~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~ 221 (449)
.+.... +.+.+.+.. .+... .+..|. .+++..+...+.......++.+++|.+.+++.+.. +|++.|++.
T Consensus 385 ~~~~~~-~~~~~~~~~~~~~~~-~~~~~~----~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~---~~~~~f~~~ 455 (481)
T TIGR00879 385 AIVFIL-LFIAFFAMGWGPVPW-VIVSEI----FPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI---GVGGVFIFF 455 (481)
T ss_pred HHHHHH-HHHHHHHccccCeeh-hhhhcc----CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CccceehhH
Confidence 222222 222222211 12221 122332 45555667777766667777778888888877654 777888876
Q ss_pred HHHHHHHHHHHHhccccCCC
Q 013096 222 VFLSILGIICVSRGWTENPK 241 (449)
Q Consensus 222 ~~~~~~~~~~i~~~~~e~~~ 241 (449)
+.+.+++.+...+..||+++
T Consensus 456 ~~~~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 456 GGLNVLGLIFVYFFLPETKG 475 (481)
T ss_pred HHHHHHHHHHHheecccCCC
Confidence 66655555545445566554
No 155
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.01 E-value=7.2e-08 Score=94.99 Aligned_cols=131 Identities=11% Similarity=-0.023 Sum_probs=87.0
Q ss_pred hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh-CchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHH
Q 013096 74 SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI-GQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICL 151 (449)
Q Consensus 74 ~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~-GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~ 151 (449)
..+.|...++.|.|+.+.+.+.+...++..+++++.|+++||+ +||+.+..+.++..++.+ +...++..... .-++.
T Consensus 217 ~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 295 (355)
T TIGR00896 217 IGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVL 295 (355)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHH
Confidence 3456666778899999999998888889999999999999999 566666676666665543 33433322222 44678
Q ss_pred HhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc
Q 013096 152 SLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 152 Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~ 209 (449)
|++.+...+...+....+ ..++++.+...+.......++..++|.+.+++.+..
T Consensus 296 g~~~g~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 296 GLGQGGAFPLALTLIGLR----SRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred HHhhhhHhHHHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999887776654432221 112233444555544444455567888888888765
No 156
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.98 E-value=4.3e-06 Score=82.46 Aligned_cols=330 Identities=11% Similarity=-0.020 Sum_probs=180.0
Q ss_pred hhHHHHHHHHHHHHHhhh-hhHHHHHHH-H-HhCCChHHHH-HHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHH
Q 013096 55 FQRNFLLLFSLASVMEGL-WSVFGEYEL-V-YYGVAKEQMM-LLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHL 130 (449)
Q Consensus 55 ~~~~~~~~~~l~~~~~~~-~~~~~~~l~-~-~~g~s~~~ig-~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~ 130 (449)
|++....++..+.+-+.= .-||+.+.. + +.|++++|+. -++-...-+.+..-++...++|..|.||+++.+.+...
T Consensus 3 w~~~~~llc~~gf~~~frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i 82 (412)
T PF01770_consen 3 WKKITLLLCLFGFFKEFRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYI 82 (412)
T ss_pred chHHHHHHHHHHHHHhcCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 334444444444333211 135553333 3 4899999877 45555555666666789999999999999999888876
Q ss_pred HHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc
Q 013096 131 FVGV-WKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 131 ~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~ 209 (449)
+.-. ..+.++...+-+..+.-|++.+....-. + ++... .++++..++-+..-....++-.++.++|..+....
T Consensus 83 ~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~-s-Yiys~----v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~ 156 (412)
T PF01770_consen 83 ITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYY-S-YIYSV----VDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFG 156 (412)
T ss_pred HHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHH-H-Hheee----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6543 5667999999999999999987643221 1 22111 23333444444433333344456667777666532
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHhccccCCC-------------------C------Ccc-----h------hh-----
Q 013096 210 VKKGVVPSSTASVFLSILGIICVSRGWTENPK-------------------M------AFD-----D------YR----- 248 (449)
Q Consensus 210 ~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~~-------------------~------~~~-----~------~~----- 248 (449)
+.+++....++.....++.++..+ +|..++ + ++. + ..
T Consensus 157 -~~sy~~L~~isl~~~~~a~~~~~f-LP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (412)
T PF01770_consen 157 -GVSYFQLNYISLASVSLALLIALF-LPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLR 234 (412)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHH-cCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHH
Confidence 234444555554443333333222 221110 0 000 0 00
Q ss_pred --hhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhcc----CCCccchHHHHHHHHHHHHHhhhHHHHHhcCCCC
Q 013096 249 --TSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA----DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSS 322 (449)
Q Consensus 249 --~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~ 322 (449)
...+++..+||+++...+.+++...+.+-...+++..... +....-.|.+-+...+...+++...+++..++.+
T Consensus 235 ~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~ 314 (412)
T PF01770_consen 235 LLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDR 314 (412)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHH
Confidence 1224455678888776665555544433222222221111 1223345777666666667777888887442212
Q ss_pred CCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHH
Q 013096 323 FRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAP 394 (449)
Q Consensus 323 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~ 394 (449)
.+ +..+....++.+.+++++.... ++++....++++....-+..+....-+++....|.-|-++|++.+.
T Consensus 315 ~~-~l~l~~~S~l~a~~L~lm~~t~-~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 315 WG-ELALGVFSLLQAGLLFLMSFTG-NIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFV 384 (412)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHH
Confidence 21 1122222234444455444443 5666667777776666666666666666667777777778776543
No 157
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.98 E-value=8.8e-08 Score=95.94 Aligned_cols=154 Identities=12% Similarity=0.024 Sum_probs=97.7
Q ss_pred HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCc-hHHHHHHHHHHHHHHHHH--H---hc-chhHHHHHHHHHHhHH
Q 013096 83 YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQ-KKVCLIFFILHLFVGVWK--S---IT-AHPSVWVANICLSLAS 155 (449)
Q Consensus 83 ~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GR-r~~ll~~~~~~~~~~l~~--~---~~-s~~~l~~~R~l~Glg~ 155 (449)
|.+.+.+..|++.++..++.+++.|.+|.++.|.|+ |+.++.+.++..++++.. + .+ +.+.++++|++.|+|.
T Consensus 65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV 144 (488)
T ss_pred CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc
Confidence 478888889999999999999999999999999996 677778888888877532 2 23 6899999999999998
Q ss_pred HHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc-ccC------C---cchhHHHHHHHH
Q 013096 156 SIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID-VKK------G---VVPSSTASVFLS 225 (449)
Q Consensus 156 ~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~-~~~------g---~~~~f~~~~~~~ 225 (449)
+..... - .++++.. ..++..++++..+.+..++.++||.++..+.... +++ . +..|-++.++..
T Consensus 145 ~n~a~l-R-~Y~a~~s----~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~ 218 (488)
T KOG2325|consen 145 GNFAVL-R-AYIADAS----TVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILW 218 (488)
T ss_pred ccHHHH-H-HHHHhcc----CccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHH
Confidence 764322 2 2444331 1112334555444444445555555554443211 010 1 123455566665
Q ss_pred HHHHHHHHhccccCCCC
Q 013096 226 ILGIICVSRGWTENPKM 242 (449)
Q Consensus 226 ~~~~~~i~~~~~e~~~~ 242 (449)
++..+++....+|...+
T Consensus 219 i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 219 IIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHHHhheeecccC
Confidence 55555555566776543
No 158
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.97 E-value=6e-08 Score=99.58 Aligned_cols=159 Identities=12% Similarity=-0.057 Sum_probs=91.1
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh--cch-h-HHHHHHHH
Q 013096 76 FGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI--TAH-P-SVWVANIC 150 (449)
Q Consensus 76 ~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~--~s~-~-~l~~~R~l 150 (449)
+.|.++++.|.+..+.+.......+...++.++.|+++||+|||++++.+.++.+++.+ .... ++. + .....-++
T Consensus 293 ~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 372 (479)
T PRK10077 293 YAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLF 372 (479)
T ss_pred HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 44667778888876655555555566778889999999999999999998887776553 2221 221 1 22223333
Q ss_pred HHhHHHHhh-hhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHH----HHHH--HHHhcccccCCcchhHHHHHH
Q 013096 151 LSLASSIFS-FNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGG----QVLA--NWLVGIDVKKGVVPSSTASVF 223 (449)
Q Consensus 151 ~Glg~~~~~-~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a----~~lg--~~l~~~~~~~g~~~~f~~~~~ 223 (449)
.+.+.+... +... .++.|. ++.+..+.+.+.....+.++.+++ |.+. +++.+. ++|+..|.+...
T Consensus 373 ~~~~~~~~~~~~~~-~~~~e~----~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~ 444 (479)
T PRK10077 373 YVAAFAMSWGPVCW-VLLSEI----FPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAH---FHNGFSYWIYGC 444 (479)
T ss_pred HHHHHhccccchhH-HHhHhh----CChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhh---ccCccHHHHHHH
Confidence 444433221 2222 233433 455556666666555444444444 3333 233333 367778877665
Q ss_pred HHHHHHHHHHhccccCCCC
Q 013096 224 LSILGIICVSRGWTENPKM 242 (449)
Q Consensus 224 ~~~~~~~~i~~~~~e~~~~ 242 (449)
..+++.++.+...||++++
T Consensus 445 ~~~~~~~~~~~~~~e~~~~ 463 (479)
T PRK10077 445 MGVLAALFMWKFVPETKGK 463 (479)
T ss_pred HHHHHHHHHHhccccCCCC
Confidence 5555545555556777654
No 159
>TIGR00895 2A0115 benzoate transport.
Probab=98.97 E-value=8.1e-08 Score=95.48 Aligned_cols=127 Identities=10% Similarity=0.012 Sum_probs=89.2
Q ss_pred hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHHH-HhcchhHHHHHHHHHH
Q 013096 74 SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVWK-SITAHPSVWVANICLS 152 (449)
Q Consensus 74 ~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~~-~~~s~~~l~~~R~l~G 152 (449)
..+.|.+.+++|.++.+.+...+...++..++.++.|+++||+|||+.............+.. ..++.+.+++..++.|
T Consensus 270 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (398)
T TIGR00895 270 TNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAG 349 (398)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 344555557889999999988888888889999999999999999955544333332222222 2467777888889999
Q ss_pred hHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 013096 153 LASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWL 205 (449)
Q Consensus 153 lg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l 205 (449)
++.+...+...+ ++.| ..+++..++.++.......++..++|.+++++
T Consensus 350 ~~~~~~~~~~~~-~~~~----~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 350 FFVNGGQSGLYA-LMAL----FYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHH-HHhh----cCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 988876665433 2222 24666677788877766667777788777754
No 160
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.97 E-value=9.6e-08 Score=96.97 Aligned_cols=150 Identities=10% Similarity=-0.025 Sum_probs=88.1
Q ss_pred HHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh--Cc-hHHHHHHHHH--HHHHHHHH-HhcchhHHHHH
Q 013096 75 VFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI--GQ-KKVCLIFFIL--HLFVGVWK-SITAHPSVWVA 147 (449)
Q Consensus 75 ~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~--GR-r~~ll~~~~~--~~~~~l~~-~~~s~~~l~~~ 147 (449)
.+.|... +++|.|+.+.+...+...++..++.++.|+++||+ +| |+......+. ....++.. ...+...+...
T Consensus 264 ~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (434)
T PRK11663 264 DWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAAC 343 (434)
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 3445555 46799999988888888888899999999999999 33 3332221111 11111111 12233333333
Q ss_pred HHHHHhHHHHhhhh-hHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHH
Q 013096 148 NICLSLASSIFSFN-FETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSI 226 (449)
Q Consensus 148 R~l~Glg~~~~~~~-~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~ 226 (449)
.+..|++.. .+. ...+.+.|. .+.+..+...+..+..+.++..++|.+.+++.+.. ||+..|...+.+.+
T Consensus 344 ~~~~g~~~~--~~~~~~~~~~~~~----~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~---g~~~~f~~~~~~~~ 414 (434)
T PRK11663 344 FFTIGFFVF--GPQMLIGMAAAEC----SHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW---HWTGFFVVISIAAG 414 (434)
T ss_pred HHHHHHHHh--hHHHHHHHHHHhc----ccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc---ccHHHHHHHHHHHH
Confidence 344443221 111 112233332 34556677788777777777788888888888765 78888887666555
Q ss_pred HHHHHHH
Q 013096 227 LGIICVS 233 (449)
Q Consensus 227 ~~~~~i~ 233 (449)
+..+...
T Consensus 415 ~~~~~~~ 421 (434)
T PRK11663 415 ISALLLL 421 (434)
T ss_pred HHHHHHH
Confidence 5443333
No 161
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.97 E-value=2.9e-08 Score=101.92 Aligned_cols=177 Identities=15% Similarity=0.104 Sum_probs=115.0
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC----C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCC-CCchhHH
Q 013096 256 FGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD----G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSS-FRTEDCL 329 (449)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~----~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~-~~~~~~l 329 (449)
+++|+.+.......+.+...++.+..+.|.++.+ + +..+.|.+.+.+..+..+++.+.|++.| | ++++|.+
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laD---r~~G~~~~l 82 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGD---RVWGTKKTM 82 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHH---hhcchHHHH
Confidence 4566555444444444433344344567777643 2 3456788888888899999999999999 6 7988888
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcc---hhHHHHhhHHHHHHHHHHHHHHh
Q 013096 330 LYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNEL---RGGMISLSLAPANAAILLFLLLR 406 (449)
Q Consensus 330 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~---rg~~~~~~~~~~~~~~~~~~~~g 406 (449)
..+..+.+++........ +.+.......+.+++.|+..|+..++..+.+|+++ |++++++.+...|++...++..+
T Consensus 83 ~~~~~~~~~g~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~ 161 (475)
T TIGR00924 83 VLGGIVLMLGHFMLAMSI-YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLA 161 (475)
T ss_pred HHHHHHHHHHHHHHHhcc-cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHH
Confidence 777766666555444433 22333445556677888888999999999988764 88899999988898876666554
Q ss_pred HHh-hhcchhHHHHHHHHHHHHHHHHHHHHH
Q 013096 407 GFY-RNIENAAMVAFAALGLFIAAGCMHVLK 436 (449)
Q Consensus 407 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 436 (449)
++. ++.+....+..+++..+++.......+
T Consensus 162 g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 162 GVIAENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 444 445665555544444443433333333
No 162
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.96 E-value=6.6e-08 Score=99.76 Aligned_cols=139 Identities=8% Similarity=-0.061 Sum_probs=90.6
Q ss_pred HHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh--cchhHHHHHHHH
Q 013096 75 VFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI--TAHPSVWVANIC 150 (449)
Q Consensus 75 ~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~--~s~~~l~~~R~l 150 (449)
++.|... +++|.++.+.+.+.+...++..+++++.|+++||+|||++++.+..+..+..+ .... ++.+.+.+..++
T Consensus 296 ~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (496)
T PRK03893 296 ALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFF 375 (496)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 3455555 48899999999999999899999999999999999999998877665554433 2222 344444444554
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTAS 221 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~ 221 (449)
.+.......+...+ ++.|. .++++.++.++.......++..++|.+++.+.+.+ ||+..+...
T Consensus 376 ~~~~~~~~~~~~~~-~~~~~----~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~---g~~~~~~~~ 438 (496)
T PRK03893 376 QQMLGQGISGLLPK-LIGGY----FDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL---DLGTALASL 438 (496)
T ss_pred HHHHhcccchhhHH-HHHhh----CCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC---ChHHHHHHH
Confidence 44332222222222 22322 34555666777666566677778899999888765 776666543
No 163
>PRK10054 putative transporter; Provisional
Probab=98.94 E-value=6.6e-08 Score=96.92 Aligned_cols=157 Identities=13% Similarity=0.085 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHH
Q 013096 260 RIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVL 336 (449)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~ 336 (449)
+++.+.+...+...+.+ ....+.|.++++ + +..+.|+..+...++..++....|++.| |+++|+.+..+..+.
T Consensus 8 ~~~~l~~~~~~~~~g~~-~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D---r~g~k~~~~~~~~~~ 83 (395)
T PRK10054 8 STSALLASSLLLTIGRG-ATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILAD---KFDKKRYMLLAITAF 83 (395)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCcchhHHHHHHHH
Confidence 34444333334333322 223345655543 3 4566888888888888899999999999 788888766655444
Q ss_pred HHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhcchhH
Q 013096 337 GFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAA 416 (449)
Q Consensus 337 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 416 (449)
++......+.+ +.+..+...++.+.+.+...|...++..|..|+++|++++|+.+...+++...++..+++..+.+...
T Consensus 84 ~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~ 162 (395)
T PRK10054 84 ASGFIAIPLVN-NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINL 162 (395)
T ss_pred HHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 44443333333 23333333444455556667888888899999999999999998888887665665555543444444
Q ss_pred HHHHH
Q 013096 417 MVAFA 421 (449)
Q Consensus 417 ~~~~~ 421 (449)
.+...
T Consensus 163 ~f~~~ 167 (395)
T PRK10054 163 PFWLA 167 (395)
T ss_pred HHHHH
Confidence 44333
No 164
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.93 E-value=1.4e-07 Score=94.44 Aligned_cols=136 Identities=12% Similarity=0.012 Sum_probs=91.5
Q ss_pred CCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhH
Q 013096 85 GVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFE 163 (449)
Q Consensus 85 g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~ 163 (449)
+.+..+.|.+.+...+...++.+..|++.||+|||+.+.++.++.++... ...++|.+.+++.++++|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666778888888778788888999999999999999888887777554 35678899999999999988654332211
Q ss_pred HHHHHHHHhhcCChhhHHHHHHH-HHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHH
Q 013096 164 TWVAIEHEKQGQRQDILSDTFWL-MTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILG 228 (449)
Q Consensus 164 a~~v~~~~~r~~~~~~l~~~~~~-~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~ 228 (449)
. +..+. .+++..+...+. .+....++.++++.+++++.+.. ||+..|.+..+...+.
T Consensus 330 ~-~~~~~----~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~---G~~~~f~~~~~~~~i~ 387 (396)
T TIGR00882 330 K-YITSQ----FDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI---GFQGAYLVLGCIVLLF 387 (396)
T ss_pred H-HHHHh----CCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc---ccHHHHHHHHHHHHHH
Confidence 1 11111 111111111221 23345566778888899998865 8888888765554443
No 165
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.91 E-value=1.2e-07 Score=95.92 Aligned_cols=130 Identities=13% Similarity=0.020 Sum_probs=81.6
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHh
Q 013096 75 VFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSL 153 (449)
Q Consensus 75 ~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Gl 153 (449)
...|...++.|.++.+.+...+...++..++.++.|.++||+|||+.+..+.++..+..+ ....++.....+.-.+.|+
T Consensus 252 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (426)
T PRK12307 252 GLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGL 331 (426)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 345565677899999988888888888889999999999999999998887766554433 2222221112222233333
Q ss_pred HHH--HhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc
Q 013096 154 ASS--IFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 154 g~~--~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~ 209 (449)
+.. ...+.... ++.| ..|.+..++..+.......++..++|.+.+++.+..
T Consensus 332 ~~~~~~~~~~~~~-~~~~----~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 332 MATNVGVGGLVPK-FLYD----YFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM 384 (426)
T ss_pred HHhcccHhHHHHH-HHHH----hCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence 321 11111111 2222 355666677777666566667778899999887754
No 166
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.91 E-value=1.5e-07 Score=96.41 Aligned_cols=148 Identities=13% Similarity=0.012 Sum_probs=94.7
Q ss_pred HHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHH-H--HHHhcchhHHHHHHHHH
Q 013096 76 FGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVG-V--WKSITAHPSVWVANICL 151 (449)
Q Consensus 76 ~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~-l--~~~~~s~~~l~~~R~l~ 151 (449)
..|... +++|+|+.+.+...+...++..++.++.|+++||+|||+.+........+.. + ....++.+.+.+.+++.
T Consensus 280 ~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (467)
T PRK09556 280 WSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFAL 359 (467)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 344444 4689999999988888888889999999999999999998766544433322 1 22335666777888888
Q ss_pred HhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHH-HHHHHHHHHHHHhcc-c--------ccCCcchhHHHH
Q 013096 152 SLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESA-ALIGGQVLANWLVGI-D--------VKKGVVPSSTAS 221 (449)
Q Consensus 152 Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~-~~i~a~~lg~~l~~~-~--------~~~g~~~~f~~~ 221 (449)
|+........... ...| ..|.+..+.+.+.......+ +..++|.+.+++.+. + ...+|+..|.+.
T Consensus 360 G~~~~~~~~~~~~-~~~~----~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~ 434 (467)
T PRK09556 360 GFLVFGPQLLIGV-AAVG----FVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAAL 434 (467)
T ss_pred HHHHhhHHHHHHH-HHHh----hcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHH
Confidence 8643221111111 1222 24666677788876655554 556788888888771 0 012688888776
Q ss_pred HHHHHHH
Q 013096 222 VFLSILG 228 (449)
Q Consensus 222 ~~~~~~~ 228 (449)
.+..+++
T Consensus 435 ~~~~~~~ 441 (467)
T PRK09556 435 DIAAIGC 441 (467)
T ss_pred HHHHHHH
Confidence 5554444
No 167
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.90 E-value=9.7e-08 Score=97.40 Aligned_cols=156 Identities=11% Similarity=0.056 Sum_probs=100.4
Q ss_pred HHHHHHhhhhhccCC---CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCC-CchhHHHHHHHHHHHHHHHHhcccchhH
Q 013096 276 ALFWILWAPTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSF-RTEDCLLYAFVVLGFVFSIIAYDYQEIG 351 (449)
Q Consensus 276 ~~~~~~~~p~~~~~~---~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~-~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 351 (449)
++....+.|.++.+. ++.+.+.++..+.....++..+.|++.| |+ |+||.+..+..+.+++............
T Consensus 25 ~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaD---RilGrrr~iliG~il~~lg~lll~~~~~~~~ 101 (493)
T PRK15462 25 FYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLAD---KVLGNRMAVMLGALLMAIGHVVLGASEIHPS 101 (493)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccCcHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 333455678776542 3445667777777777889999999999 77 8888877766655554433332211111
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHhccCCCc--chhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHHHHHHHH
Q 013096 352 ILVALFCLFHACVGLILPSLARLRTMYVPNE--LRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAALGLFIA 428 (449)
Q Consensus 352 ~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~--~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~ 428 (449)
.......+..++.|...|+..++..|.+|++ .|.+++++.....|++...++.. +.+.++.+.+..+..++++.+++
T Consensus 102 ~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~ 181 (493)
T PRK15462 102 FLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAG 181 (493)
T ss_pred HHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHH
Confidence 2223333444667777788888999999976 69999999998888876556555 44445566666665555555554
Q ss_pred HHHHHH
Q 013096 429 AGCMHV 434 (449)
Q Consensus 429 ~~~~~~ 434 (449)
.+.+..
T Consensus 182 li~~~~ 187 (493)
T PRK15462 182 LVIFLC 187 (493)
T ss_pred HHHHHH
Confidence 444333
No 168
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.90 E-value=2e-07 Score=93.23 Aligned_cols=76 Identities=11% Similarity=0.135 Sum_probs=55.5
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHH
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSI 157 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~ 157 (449)
+++|.++.+.+.+.+...+...++.++.|++.||+|||+++..+..+..++.+ ....++.+.....-.+.+.|.+.
T Consensus 232 ~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 232 EQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSV 308 (392)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999888888888888899999999999999999988877766554 34444444334444444444443
No 169
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.88 E-value=1e-07 Score=95.23 Aligned_cols=123 Identities=8% Similarity=0.013 Sum_probs=88.2
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH--HHHhcchhHHHHHHHHHHhHHHHhh
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV--WKSITAHPSVWVANICLSLASSIFS 159 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l--~~~~~s~~~l~~~R~l~Glg~~~~~ 159 (449)
+++|.++.+.+.+.+...++..++.++.|+++||+|||+.+..+.....+..+ ....++.+.+.+..++.|...+...
T Consensus 267 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (405)
T TIGR00891 267 ADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIW 346 (405)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccch
Confidence 47899999999988888888999999999999999999998887665533322 2234566677777677776655444
Q ss_pred hhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc
Q 013096 160 FNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 160 ~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~ 209 (449)
+...+ ++.|. .+.+..++.++.......++..++|.+++++.+..
T Consensus 347 ~~~~~-~~~~~----~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 391 (405)
T TIGR00891 347 GILPK-HLGEY----FPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRL 391 (405)
T ss_pred hhHHH-HHhhh----CCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44333 33333 34555677777766666677788999999988765
No 170
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.86 E-value=8.9e-07 Score=90.42 Aligned_cols=152 Identities=15% Similarity=0.153 Sum_probs=115.3
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCch--HHHHHHHHHHHHHHHHH-H--------hcchhHHHHHHHH
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQK--KVCLIFFILHLFVGVWK-S--------ITAHPSVWVANIC 150 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr--~~ll~~~~~~~~~~l~~-~--------~~s~~~l~~~R~l 150 (449)
+++|+|..|+..+.....+.+.+++..+|++.||+|-| ++++.+++++.+.++.+ + .++-+.+++.-++
T Consensus 310 ~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~ 389 (477)
T PF11700_consen 310 EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVL 389 (477)
T ss_pred HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHH
Confidence 47999999988888888888999999999999999999 89999888886665532 2 4678889999999
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHH
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII 230 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~ 230 (449)
.|+..|...+...+ +.+|..+++ +.+..|++..+.+=.+..+||.+-+.+.+.. .+-|..+....++.+++++
T Consensus 390 ~G~~~G~~qs~sRs-~~~~LiP~g----~e~efFgly~i~gk~ss~lGPll~g~i~~~t--g~~r~g~~~l~~lf~~gl~ 462 (477)
T PF11700_consen 390 IGLFMGGIQSASRS-LFSRLIPPG----REAEFFGLYAITGKASSWLGPLLFGLITDAT--GSQRYGFLFLLVLFLIGLI 462 (477)
T ss_pred HHHHhhhHHHHHHH-HHHHhCCCc----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCchhHHHHHHHHHHHHHH
Confidence 99999988777665 445554443 4467888888777777889999988887765 1356777766666666655
Q ss_pred HHHhccccCCC
Q 013096 231 CVSRGWTENPK 241 (449)
Q Consensus 231 ~i~~~~~e~~~ 241 (449)
+.. ..+++++
T Consensus 463 ll~-~v~~~~g 472 (477)
T PF11700_consen 463 LLF-FVDVEKG 472 (477)
T ss_pred HHh-hccchhh
Confidence 443 4454443
No 171
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.85 E-value=1.4e-07 Score=93.71 Aligned_cols=133 Identities=17% Similarity=0.099 Sum_probs=91.9
Q ss_pred hhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Q 013096 283 APTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLF 360 (449)
Q Consensus 283 ~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~ 360 (449)
.|.+.++ + ++.+.|++.+.+.++..++..+.+++.| |+++|+.+..+..+.+++.......+ +.+......++.
T Consensus 28 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d---~~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 103 (385)
T TIGR00710 28 FPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSD---RYGRRPVLLLGLFIFALSSLGLALSN-NIETLLVLRFVQ 103 (385)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHH---hcCChHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHH
Confidence 4544443 2 4566888888888999999999999999 78888877766655555444433332 333344455566
Q ss_pred HHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhH-HhhhcchhHHHH
Q 013096 361 HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRG-FYRNIENAAMVA 419 (449)
Q Consensus 361 ~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~ 419 (449)
+++.+...+...++..|.+|+++|+++++..+...+++...++..++ +.+..+....+.
T Consensus 104 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 163 (385)
T TIGR00710 104 AFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFA 163 (385)
T ss_pred HcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 77778888888999999999999999999988877776545544443 344455544333
No 172
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.85 E-value=2.2e-07 Score=94.15 Aligned_cols=122 Identities=11% Similarity=0.037 Sum_probs=84.6
Q ss_pred ChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh-cchhHHHHHHHHHHhHHHHhhhhhHH
Q 013096 87 AKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI-TAHPSVWVANICLSLASSIFSFNFET 164 (449)
Q Consensus 87 s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~-~s~~~l~~~R~l~Glg~~~~~~~~~a 164 (449)
++.+.+.+.....++..++.++.|+++||+|||+++..+..+..++.+ ..+. ++.+.+.+..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666777788889999999999999999999988877766554 3333 46677778888889888876666544
Q ss_pred HHHHHHHhh---cCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc
Q 013096 165 WVAIEHEKQ---GQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 165 ~~v~~~~~r---~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~ 209 (449)
+++|..+. ..+++..+..++..+....++..+++.+.+++.+..
T Consensus 335 -~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 335 -LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred -HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33333211 112334566777777666677777888888877644
No 173
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.85 E-value=4.2e-05 Score=76.63 Aligned_cols=338 Identities=15% Similarity=0.087 Sum_probs=161.4
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHHHHHHHHHhCC-ChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHH--
Q 013096 54 PFQRNFLLLFSLASVMEGLWSVFGEYELVYYGV-AKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHL-- 130 (449)
Q Consensus 54 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~g~-s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~-- 130 (449)
+..+.++.-.+++..+|.++.-..+....+..- +---.......-.+...++++..|.+.||..|+|+.-.+.+..-
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLS 81 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHH
Confidence 345566677788888887765444333333321 21112222233335677889999999999999999888766532
Q ss_pred --HHHH--HH-Hh-c-----chhHHHHHH---HHHHhHHHHhhhhhHH------HHHHHHHhhcCChhhHHHHHHHHHHH
Q 013096 131 --FVGV--WK-SI-T-----AHPSVWVAN---ICLSLASSIFSFNFET------WVAIEHEKQGQRQDILSDTFWLMTFF 190 (449)
Q Consensus 131 --~~~l--~~-~~-~-----s~~~l~~~R---~l~Glg~~~~~~~~~a------~~v~~~~~r~~~~~~l~~~~~~~~~~ 190 (449)
+++. .. +. + +-+.....- .+.|.-.-. ....+. |++.-. +.+++.+.+.++.+--.
T Consensus 82 v~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~L-as~~~~iavERDWVvvi~---~~~~~~La~~NA~mRRI 157 (432)
T PF06963_consen 82 VAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERL-ASIANTIAVERDWVVVIA---GGDPGALARMNATMRRI 157 (432)
T ss_pred HHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHH-HHhhhhheeccchhhhhc---CCChhhHHHHHHHHHHH
Confidence 2222 11 11 1 112222111 122211111 111111 222111 12445677777777666
Q ss_pred hHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHH----H---HHhccccCCCC---C----cch-h--------
Q 013096 191 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII----C---VSRGWTENPKM---A----FDD-Y-------- 247 (449)
Q Consensus 191 ~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~----~---i~~~~~e~~~~---~----~~~-~-------- 247 (449)
-...-+++|++.+.+.+.. +.+....+..+..+++.. + ++...|+-..+ + .++ .
T Consensus 158 DL~ckllaPl~vG~l~t~~---s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~ 234 (432)
T PF06963_consen 158 DLFCKLLAPLFVGLLMTFA---SPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSD 234 (432)
T ss_pred HHHHHHHHHHHHHHHhhcc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccch
Confidence 6667788999999887643 443333332222222222 1 22223321111 0 000 0
Q ss_pred -------------hhhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccCC-CccchHHHHHHHHHHHHHhhhHH
Q 013096 248 -------------RTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG-REVHLGLIFPSLLGARMLGSTVF 313 (449)
Q Consensus 248 -------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~g~i~~~~~~~~~lg~~l~ 313 (449)
..++|+.-++++.++ -.+..++.+.....|-...+.....+| ++...|..-+...+..+.|..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~w~~Y~~q~vfl-as~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~ 313 (432)
T PF06963_consen 235 PSILKRLWNPLRTIIRGWRTYFRQPVFL-ASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVY 313 (432)
T ss_pred hhHHHHHHHHHHHHhccHHHHHhCHHHH-HHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 011233334444332 233223332222222122222222233 34456666666667788999999
Q ss_pred HHHhcCCCCCCchhHHHHHHH----HHHHHHHHHhcccch-hHHHHHHHHHH-HHH-hhh--hhhHHHHHHhccCCCcch
Q 013096 314 PWLISGPSSFRTEDCLLYAFV----VLGFVFSIIAYDYQE-IGILVALFCLF-HAC-VGL--ILPSLARLRTMYVPNELR 384 (449)
Q Consensus 314 ~~l~~~~~~~~~~~~l~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~l~-~~~-~g~--~~p~~~~~~~~~~p~~~r 384 (449)
+++.+ |.|..|.-..+.. ...++.........+ .......++.. ... .|+ .--+.+-+.+|.+|+++|
T Consensus 314 p~l~~---riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~R 390 (432)
T PF06963_consen 314 PWLMK---RIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESER 390 (432)
T ss_pred HHHHH---HhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHh
Confidence 99998 7887664333221 111111111111111 11111111111 111 122 224556677899999999
Q ss_pred hHHHHhhHHHHHHHHHHH
Q 013096 385 GGMISLSLAPANAAILLF 402 (449)
Q Consensus 385 g~~~~~~~~~~~~~~~~~ 402 (449)
|++.|.-....+++-+..
T Consensus 391 g~v~gvq~sl~~lf~ll~ 408 (432)
T PF06963_consen 391 GAVSGVQNSLQSLFELLS 408 (432)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999999888777764333
No 174
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.83 E-value=2.2e-07 Score=95.70 Aligned_cols=177 Identities=12% Similarity=0.078 Sum_probs=105.7
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHHhhhhhccC--C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCC-CCchhHHHHH
Q 013096 257 GDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSS-FRTEDCLLYA 332 (449)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~-~~~~~~l~~~ 332 (449)
++|+-....+...+.+-..|+....+.+.++++ + +..+.+.+...+.....+...+.|++.| | +|+||.+..+
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laD---r~~G~r~~~~~g 87 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGD---HLLGTKRTIVLG 87 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhh---hccchHHHHHHH
Confidence 344444333322333333333333344555443 2 3334555555666555666678999999 6 8999988877
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcc--hhHHHHhhHHHHHHHHHHHHHHhHHh-
Q 013096 333 FVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNEL--RGGMISLSLAPANAAILLFLLLRGFY- 409 (449)
Q Consensus 333 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~--rg~~~~~~~~~~~~~~~~~~~~g~~~- 409 (449)
..+.+++.....+..+.....+....+.+++.|+..|+..++..|.+|+++ |++++++.....|++...++..+++.
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~ 167 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIA 167 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 666655544443332212223345556678888888999999999998774 57788888888888876666555444
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHH
Q 013096 410 RNIENAAMVAFAALGLFIAAGCMHVLK 436 (449)
Q Consensus 410 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ 436 (449)
++.+....+....++++...+.+...+
T Consensus 168 ~~~gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 168 DKFGYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred HhhChHHHHHHHHHHHHHHHHHHHHcc
Confidence 556666655555455554444444434
No 175
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.82 E-value=1.6e-07 Score=94.07 Aligned_cols=112 Identities=15% Similarity=0.053 Sum_probs=82.8
Q ss_pred CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhH
Q 013096 291 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPS 370 (449)
Q Consensus 291 ~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~ 370 (449)
++...+++.+.+.+...+..++.|++.| |+++||.+..+..+.++......... +. +...++.+++.++..|.
T Consensus 36 s~~~~~~~~~~~~l~~~l~~~~~G~laD---r~grr~vl~~~~~~~~~~~~~~~~~~-~~---~~~r~l~G~~~a~~~pa 108 (393)
T PRK11195 36 PDWSQPLLQMFFVLAYIVLAPFVGAFAD---SFPKGRVMFIANGIKLLGCLLMLFGI-HP---LLAYGLVGIGAAAYSPA 108 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhHhhh---ccCCchhhHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHH
Confidence 4455788888888999999999999999 89999987776554443332222221 11 23334567888889999
Q ss_pred HHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHh
Q 013096 371 LARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFY 409 (449)
Q Consensus 371 ~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~ 409 (449)
..++..|.+|+|+|++++|+.+...+.+...++..|++.
T Consensus 109 ~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 109 KYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998887777655566655544
No 176
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.81 E-value=3.8e-07 Score=94.28 Aligned_cols=172 Identities=13% Similarity=0.159 Sum_probs=100.3
Q ss_pred hhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccCC---CccchHHHHHHHHHHHHHhhhHHHHHhcCCCC-CCchhHHH
Q 013096 255 IFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSS-FRTEDCLL 330 (449)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~-~~~~~~l~ 330 (449)
.+++|+-+.........+...++.+..|.|.++++. +..+.+.+...+.........+.+++.| | +++|+.+.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaD---r~~G~r~~~~ 92 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGD---KVLGTKRVIM 92 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccchHHHHH
Confidence 456765333333333333333444455777776542 2233444444444333344468899999 7 58888777
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcc--hhHHHHhhHHHHHHHHHHHHHHhHH
Q 013096 331 YAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNEL--RGGMISLSLAPANAAILLFLLLRGF 408 (449)
Q Consensus 331 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~--rg~~~~~~~~~~~~~~~~~~~~g~~ 408 (449)
.+..+.+++........+..........+.+++.|+..|+..++..+.+|++. |.+++++.+...+++...++..+++
T Consensus 93 ~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~ 172 (500)
T PRK09584 93 LGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPW 172 (500)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 76665555544443332222233344456677888888888888999998653 4457777777888876666655544
Q ss_pred -hhhcchhHHHHHHHHHHHHHH
Q 013096 409 -YRNIENAAMVAFAALGLFIAA 429 (449)
Q Consensus 409 -~~~~~~~~~~~~~~~~~l~~~ 429 (449)
.++.++...+...++..++..
T Consensus 173 l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 173 LAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHhhCHHHHHHHHHHHHHHHH
Confidence 455666665555544444433
No 177
>PRK11043 putative transporter; Provisional
Probab=98.80 E-value=6.7e-07 Score=89.64 Aligned_cols=125 Identities=10% Similarity=-0.007 Sum_probs=77.3
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH----HHH--hcchhHHHHHHHH
Q 013096 77 GEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV----WKS--ITAHPSVWVANIC 150 (449)
Q Consensus 77 ~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l----~~~--~~s~~~l~~~R~l 150 (449)
.|.+.+++|.++.+.+..+....++..+++...+.+.||+|||+.........+++.+ ... .++.+.+++.-.+
T Consensus 226 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (401)
T PRK11043 226 SPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCV 305 (401)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 4455567899999999877766677778888899999999999987655544443321 111 2455555666677
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVG 207 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~ 207 (449)
.|++.+...+...+.. .|. .+ ++.+++.+..+..+......++.+.+.+.+
T Consensus 306 ~~~~~~~~~~~~~~~~-~~~----~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 306 MAAANGAIYPIVVAQA-LRP----FP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHH-hhh----Cc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 7888877666543321 111 12 234556666554444444455555565543
No 178
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.77 E-value=1.5e-06 Score=88.15 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=43.8
Q ss_pred hHHHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHH
Q 013096 74 SVFGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILH 129 (449)
Q Consensus 74 ~~~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~ 129 (449)
..+.|... +++|.+..+.+...+.......+++++.|+++||+|||++++++.++.
T Consensus 263 ~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~ 319 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLA 319 (432)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 34555555 457999988888777777777888999999999999999887765543
No 179
>PRK15075 citrate-proton symporter; Provisional
Probab=98.77 E-value=1.2e-06 Score=88.94 Aligned_cols=132 Identities=13% Similarity=0.132 Sum_probs=76.9
Q ss_pred hhHHHHHHHHH-hCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH--H-H--HhcchhHHHH
Q 013096 73 WSVFGEYELVY-YGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV--W-K--SITAHPSVWV 146 (449)
Q Consensus 73 ~~~~~~~l~~~-~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l--~-~--~~~s~~~l~~ 146 (449)
...+.|+.+++ +|.++.+.+.......++..++.++.|+++||+||||+++.+.....+... . . ..++...+.+
T Consensus 257 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK15075 257 ITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLA 336 (434)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 34556666654 799998888777777777888899999999999999998776443322111 1 1 1234444444
Q ss_pred HHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHH-HHHhHHHHHHHHHHHHHHhccc
Q 013096 147 ANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLM-TFFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 147 ~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~-~~~~~~~~i~a~~lg~~l~~~~ 209 (449)
..++.|++.+...+.... ++.|..+++ ..+..++.. +.+..++..++|.+.+++.+..
T Consensus 337 ~~~~~~~~~g~~~~~~~~-~~~e~~p~~----~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 337 VELWLSFLYGSYNGAMVV-ALTEVMPAE----VRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHHHHHHHHHHhhHHH-HHHHHCCCC----ccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 455556665544333222 344543322 223333332 2222232345777788887765
No 180
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.77 E-value=2.2e-06 Score=87.55 Aligned_cols=149 Identities=13% Similarity=0.014 Sum_probs=85.4
Q ss_pred hHHHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh--CchHHHHH-HHHHHHHHHH-HHH--hcchhHHHH
Q 013096 74 SVFGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI--GQKKVCLI-FFILHLFVGV-WKS--ITAHPSVWV 146 (449)
Q Consensus 74 ~~~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~--GRr~~ll~-~~~~~~~~~l-~~~--~~s~~~l~~ 146 (449)
..+.|...+ ++|.+..+.+.......++..++.++.|+++||+ |||+...+ ...+..++.+ ... .++.+.+.+
T Consensus 273 ~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 352 (452)
T PRK11273 273 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMA 352 (452)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHH
Confidence 445566565 4789988888877777778888899999999999 55654322 2222222222 112 234444445
Q ss_pred HHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHH-HHHHHHHHHHHhcccccCCcchhHHHHHHHH
Q 013096 147 ANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAA-LIGGQVLANWLVGIDVKKGVVPSSTASVFLS 225 (449)
Q Consensus 147 ~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~-~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~ 225 (449)
..++.|.+....... ..++..| ..|.+..++..+..+.....+ .+++|.+.+++.+.. ||+..|.+.....
T Consensus 353 ~~~~~g~~~~~~~~~-~~~~~~~----~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~---g~~~~f~~~~~~~ 424 (452)
T PRK11273 353 CMIVIGFLIYGPVML-IGLHALE----LAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF---GWDGGFMVMIGGS 424 (452)
T ss_pred HHHHHHHHHHhHHHH-HHHHHHH----HcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh---cchHHHHHHHHHH
Confidence 444445432211111 1112222 245555667777665443343 445788888888765 7888888765554
Q ss_pred HHHHH
Q 013096 226 ILGII 230 (449)
Q Consensus 226 ~~~~~ 230 (449)
+++.+
T Consensus 425 ~~~~~ 429 (452)
T PRK11273 425 ILAVI 429 (452)
T ss_pred HHHHH
Confidence 44433
No 181
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.76 E-value=5.9e-07 Score=90.22 Aligned_cols=127 Identities=15% Similarity=0.065 Sum_probs=89.8
Q ss_pred CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhH
Q 013096 291 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPS 370 (449)
Q Consensus 291 ~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~ 370 (449)
+....|+......+...+.+++.+++.| |+++|+.+..+..+.++........+ +.+...+...+.+++.+...|.
T Consensus 44 s~~~~gl~~~~~~l~~~~~~~~~G~l~d---r~g~k~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~ 119 (400)
T PRK11646 44 AAVMVGIALGLRQFIQQGLGIFGGAIAD---RFGAKPMIVTGMLMRAAGFATMAIAH-EPWLLWLSCILSGLGGTLFDPP 119 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhHHHH---HhCchHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHH
Confidence 4566788887777777777889999999 78888887776666655554444433 3344444445566777777888
Q ss_pred HHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhcchhHHHHHH
Q 013096 371 LARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMVAFA 421 (449)
Q Consensus 371 ~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 421 (449)
..++..+.+|+|+|++++|+.+...+++...++..+++..+.+....+.+.
T Consensus 120 ~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~ 170 (400)
T PRK11646 120 RTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATG 170 (400)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 888899999999999999999988888766666555444355554444443
No 182
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.76 E-value=1.4e-06 Score=90.05 Aligned_cols=145 Identities=14% Similarity=0.025 Sum_probs=108.7
Q ss_pred HHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhH
Q 013096 77 GEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLA 154 (449)
Q Consensus 77 ~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg 154 (449)
+|.+. +++|.++.+.|++.++..++..+++...+.+.+|+++++++..+.+.++++.+ .+++++.+...+.-++.|++
T Consensus 241 lPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~ 320 (524)
T PF05977_consen 241 LPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAA 320 (524)
T ss_pred hhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 34444 47899999999999999999999999999999999999999888888887765 77889999999888999988
Q ss_pred HHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHH
Q 013096 155 SSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGI 229 (449)
Q Consensus 155 ~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~ 229 (449)
........++ . .++..|++.++++++........+..+|..+.|.+.+.. |.+..+.++++..+++.
T Consensus 321 ~~~~~~~~~t-~----~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~---g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 321 WIIANSSLNT-L----VQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF---GVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHH-H----HHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHH
Confidence 7655444332 1 234467777899998876655555556777888887765 66666666554444443
No 183
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.75 E-value=5.2e-07 Score=88.15 Aligned_cols=127 Identities=19% Similarity=0.252 Sum_probs=93.2
Q ss_pred CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhH
Q 013096 291 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPS 370 (449)
Q Consensus 291 ~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~ 370 (449)
++.+.+++.+...++..+++.+.+++.| |+++|+.+..+..+.+++..+..+.. +.+..+...++.+++.+...|.
T Consensus 30 s~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~ 105 (352)
T PF07690_consen 30 SPSQIGLLFSAFFLGSALFSPFAGYLSD---RFGRRRVLIIGLLLFALGSLLLAFAS-NFWLLLIARFLLGIGSGFFSPA 105 (352)
T ss_dssp TSHCHHHHHHHHHHHHHHHHHHHHHHHH---HS-HHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCCeeeEeehhhhhhhHHHHhhhhh-hHHHHhhhcccccccccccccc
Confidence 5667899888888999999999999999 88888877777666655533333322 3344555666778888889999
Q ss_pred HHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHh-hhcchhHHHHHH
Q 013096 371 LARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFY-RNIENAAMVAFA 421 (449)
Q Consensus 371 ~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~ 421 (449)
..++..|.+|+|+|+++++..+...+++...++..+++. +..+.+..+.+.
T Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~ 157 (352)
T PF07690_consen 106 SNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLIS 157 (352)
T ss_dssp HHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHH
T ss_pred ccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccc
Confidence 999999999999999999999988888766666555443 455554444333
No 184
>PRK10504 putative transporter; Provisional
Probab=98.74 E-value=6.2e-07 Score=91.97 Aligned_cols=138 Identities=14% Similarity=0.094 Sum_probs=94.9
Q ss_pred HHHhhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHH
Q 013096 279 WILWAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVAL 356 (449)
Q Consensus 279 ~~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~ 356 (449)
+..+.|.+.++ + ++.+.+++.+.+.++..++..+.+++.| |+++||....+..+.+++.....+.+ +.+..+..
T Consensus 29 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---~~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 104 (471)
T PRK10504 29 VNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLAD---RVGVRNIFFTAIVLFTLGSLFCALSG-TLNELLLA 104 (471)
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhchHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHH
Confidence 34567887764 2 4455677777778888899999999999 78888877765555544443333332 33344455
Q ss_pred HHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHh-HHhhhcchhHHHHH
Q 013096 357 FCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLR-GFYRNIENAAMVAF 420 (449)
Q Consensus 357 ~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~ 420 (449)
.++.+++.+...|...+...|.+|+++|+++++..+...+++...++..+ .+.+..+....+.+
T Consensus 105 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~ 169 (471)
T PRK10504 105 RVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLI 169 (471)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHH
Confidence 56677888888888888889999999999999998887777655555444 44455555444433
No 185
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.73 E-value=4e-07 Score=89.67 Aligned_cols=109 Identities=15% Similarity=0.182 Sum_probs=76.4
Q ss_pred HHHHHHHHHhCCChHHHHHHHHH-HHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHH-h----------cch
Q 013096 75 VFGEYELVYYGVAKEQMMLLLCA-GFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKS-I----------TAH 141 (449)
Q Consensus 75 ~~~~~l~~~~g~s~~~ig~l~~~-~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~-~----------~s~ 141 (449)
...+...+++|.++++++.+... +.+...++.+++|+++||+||||.+..+.++..++.. ... . ++.
T Consensus 230 ~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (356)
T TIGR00901 230 VLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHL 309 (356)
T ss_pred HHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchH
Confidence 33444456789999999877764 4456778888999999999999998888777666543 222 2 345
Q ss_pred hHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHH
Q 013096 142 PSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMT 188 (449)
Q Consensus 142 ~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~ 188 (449)
+.+....++.+++.+...+...+ +..|. .|++..++.++..+
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~~-~~~~~----~p~~~~g~~~g~~~ 351 (356)
T TIGR00901 310 LMLFLTITLEAVTGGLGTVAFVA-FLSKL----SNPKFGATQMALLS 351 (356)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHH-HHHHh----cCCCccHHHHHHHH
Confidence 77888889999998887776554 33443 34555666666544
No 186
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.70 E-value=1.5e-06 Score=89.41 Aligned_cols=145 Identities=12% Similarity=-0.060 Sum_probs=78.7
Q ss_pred HHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchH-----H-H-HHHHHHHHHHHH-HHHhcchhHHHHH
Q 013096 77 GEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKK-----V-C-LIFFILHLFVGV-WKSITAHPSVWVA 147 (449)
Q Consensus 77 ~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~-----~-l-l~~~~~~~~~~l-~~~~~s~~~l~~~ 147 (449)
.|... +++|.++.+.+.+.+...++..++.++.|+++||+|||+ . + ....++.++..+ ....++.+...+.
T Consensus 275 ~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 354 (476)
T PLN00028 275 IAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVV 354 (476)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 34433 467999999998888888888999999999999999762 2 2 122222222222 2334455555555
Q ss_pred HHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHH
Q 013096 148 NICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSIL 227 (449)
Q Consensus 148 R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~ 227 (449)
-++.+++.+...+...+ +..+ ..++..+...+....++.++++++|.+ .......+|+..|.+..++.++
T Consensus 355 ~~l~~~~~~~~~~~~~~-~~~~-----~~~~~~g~~~g~~~~~g~lg~~i~~~l----~~~~~~~~y~~~f~~~~~~~~i 424 (476)
T PLN00028 355 MILFSIFVQAACGATFG-IVPF-----VSRRSLGVISGLTGAGGNVGAVLTQLL----FFTGSSYSTETGISLMGVMIIA 424 (476)
T ss_pred HHHHHHHHHHhhhhhcc-cCcc-----cChhhchhhhhhhhccccHHHHHHHHH----HHhcCCccHhhHHHHHHHHHHH
Confidence 55666654433322211 1112 122334555555544444444444443 3211013577788776555444
Q ss_pred HHHH
Q 013096 228 GIIC 231 (449)
Q Consensus 228 ~~~~ 231 (449)
+.+.
T Consensus 425 ~~~~ 428 (476)
T PLN00028 425 CTLP 428 (476)
T ss_pred HHHH
Confidence 4433
No 187
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.69 E-value=5.3e-06 Score=80.27 Aligned_cols=129 Identities=12% Similarity=0.017 Sum_probs=84.3
Q ss_pred hCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhh
Q 013096 84 YGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFNF 162 (449)
Q Consensus 84 ~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~ 162 (449)
+|.++++.+..++.+..+..++....++++||+|+||++.++..+..+..+ ....++... ...-++.|++.+..+|..
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~ 251 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTI 251 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 689999999999999899999999999999999999998877666655444 323333322 234457889998888886
Q ss_pred HHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHH
Q 013096 163 ETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVF 223 (449)
Q Consensus 163 ~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~ 223 (449)
.+....+. +++ .+...+.. ..+.++..+.|.+-+.+.+.. |.+..|++...
T Consensus 252 ~s~a~~~~-----~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~---g~~~a~~v~~~ 302 (310)
T TIGR01272 252 FSLALNAL-----GRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCL---GIQLAFALPVP 302 (310)
T ss_pred HHHHHhhh-----hhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhc---cchHHHHHHHH
Confidence 44332221 111 11122222 233355566787777777754 66677765433
No 188
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.68 E-value=7e-07 Score=91.75 Aligned_cols=133 Identities=17% Similarity=0.160 Sum_probs=95.0
Q ss_pred hhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH
Q 013096 282 WAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCL 359 (449)
Q Consensus 282 ~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l 359 (449)
..|.+.++ + +..+.+++.+.+.++..++.++.+++.| |+++|+.+..+..+.+++.......+ +....+..-++
T Consensus 24 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~ 99 (485)
T TIGR00711 24 AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAK---RFGTRRLFLISTFAFTLGSLLCGVAP-NLELMIIFRVI 99 (485)
T ss_pred HHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHH---HhCcHHHHHHHHHHHHHHHHHHhCcC-CHHHHHHHHHH
Confidence 46766554 2 4456788888889999999999999999 88988887776665555544444433 33444555566
Q ss_pred HHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhH-HhhhcchhHHH
Q 013096 360 FHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRG-FYRNIENAAMV 418 (449)
Q Consensus 360 ~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~ 418 (449)
.+++.+...|...++..|.+|+++|++++++......++...++..++ +.++.+....+
T Consensus 100 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f 159 (485)
T TIGR00711 100 QGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIF 159 (485)
T ss_pred HHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehh
Confidence 677888888999999999999999999999988877776555554443 34445544433
No 189
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.65 E-value=8.5e-06 Score=77.97 Aligned_cols=210 Identities=13% Similarity=0.021 Sum_probs=122.7
Q ss_pred CCccchhHHHHHHHHHHHHHHhhcccccCC-CCCCCCCCCCCCCcchhhhHHHHHHHH-HHHHHhhhhhHHHHHHHHHhC
Q 013096 8 PFGNRVHFLYIFIFLSCFFSIFLLPSKSSS-SSSSSLFDHSNSSSFVPFQRNFLLLFS-LASVMEGLWSVFGEYELVYYG 85 (449)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~l~~~~g 85 (449)
+.|+.+..+.-.+...++..|. |...++ ..+.+.+.+...+-+++-+--.+.+|+ +-++......--+|.++.|.|
T Consensus 162 ~gW~~aL~~WAl~allAl~~Wl--Pq~~r~~~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G 239 (395)
T COG2807 162 GGWRGALGFWALLALLALLIWL--PQALREQAASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRG 239 (395)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh--hhcccccccccccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcC
Confidence 3688887777666665555544 432211 112222222211112221111222222 333333333345689999999
Q ss_pred CChHHHHHHHHHHHHhHHHHHHHHHhhhhhh-CchHHHHHHHHHHHHHHH-HHHhc-chhHHHHHHHHHHhHHHHhhhhh
Q 013096 86 VAKEQMMLLLCAGFSAALFVGSFLGMISDLI-GQKKVCLIFFILHLFVGV-WKSIT-AHPSVWVANICLSLASSIFSFNF 162 (449)
Q Consensus 86 ~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~-GRr~~ll~~~~~~~~~~l-~~~~~-s~~~l~~~R~l~Glg~~~~~~~~ 162 (449)
+|+++.|.+.+...+.+...++..-.+++|. +||+..+.....+.++.. +.+.| +.+.+. -++.|+|.|..++..
T Consensus 240 ~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw--~~llG~G~G~~F~la 317 (395)
T COG2807 240 LSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW--ALLLGLGQGGAFPLA 317 (395)
T ss_pred CCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH--HHHHhCccchHHHHH
Confidence 9999999999988888888888888999965 577777666666555433 33443 333333 389999999888776
Q ss_pred HHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHH
Q 013096 163 ETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSIL 227 (449)
Q Consensus 163 ~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~ 227 (449)
-. ++.+ |..+.++.++..++.+..+.+-+..||.+-|++.+.. .+|+.+...-+...++
T Consensus 318 L~-li~~---rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~--gsw~~~~~~l~~~~i~ 376 (395)
T COG2807 318 LT-LILL---RSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT--GSWSAPLVLLALATLL 376 (395)
T ss_pred HH-HHHh---hcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc--CChHHHHHHHHHHHHH
Confidence 44 3332 2223333444455555455555567899999988865 3777776654444333
No 190
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.64 E-value=2e-06 Score=88.89 Aligned_cols=137 Identities=15% Similarity=0.054 Sum_probs=94.3
Q ss_pred HHhhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHH
Q 013096 280 ILWAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALF 357 (449)
Q Consensus 280 ~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 357 (449)
..-.|.+..+ + +..+.+++...+.++...+.+..+++.| |+++|+.+..+..+.+++.......+ +.+.++..-
T Consensus 26 ~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D---~~Grk~~l~~~~~~~~~~~~~~~~a~-~~~~li~~r 101 (495)
T PRK14995 26 HVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGD---RIGFKRLLMLGGTLFGLASLAAAFSP-TASWLIATR 101 (495)
T ss_pred HHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHcC-CHHHHHHHH
Confidence 3346777654 2 3456788888888888888899999999 89999888777666555544444443 344445454
Q ss_pred HHHHHHhhhhhhHHHHHHhccC-CCcchhHHHHhhHHHHHHHHHHHHHHhHH-hhhcchhHHHHH
Q 013096 358 CLFHACVGLILPSLARLRTMYV-PNELRGGMISLSLAPANAAILLFLLLRGF-YRNIENAAMVAF 420 (449)
Q Consensus 358 ~l~~~~~g~~~p~~~~~~~~~~-p~~~rg~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~ 420 (449)
.+.+++.+...|.......+.+ |+++|++++|+.....+++...++..+++ .+..+....+.+
T Consensus 102 ~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i 166 (495)
T PRK14995 102 ALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLI 166 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHH
Confidence 5667777777777666565554 77899999999988888876666666544 455565554443
No 191
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.64 E-value=3.4e-06 Score=85.36 Aligned_cols=39 Identities=31% Similarity=0.295 Sum_probs=30.8
Q ss_pred HHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHH
Q 013096 95 LCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVG 133 (449)
Q Consensus 95 ~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~ 133 (449)
...+.+...+..|++|+++||+||||++.++.+...+..
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFS 330 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHH
Confidence 344556778889999999999999999998876655543
No 192
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.63 E-value=3.4e-06 Score=83.13 Aligned_cols=135 Identities=14% Similarity=0.038 Sum_probs=81.2
Q ss_pred HHHHHH-HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCc-hHHHHHH-HHHHHHHH-HH-HH--hcchhHHHHHH
Q 013096 76 FGEYEL-VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQ-KKVCLIF-FILHLFVG-VW-KS--ITAHPSVWVAN 148 (449)
Q Consensus 76 ~~~~l~-~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GR-r~~ll~~-~~~~~~~~-l~-~~--~~s~~~l~~~R 148 (449)
+.+... +++|.++.+.+...+...++..++.++.|+++||.++ |+..+.. .......+ .. .. ..+.+...+..
T Consensus 238 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (379)
T TIGR00881 238 WSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICL 317 (379)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHH
Confidence 344433 4679999999988888888888999999999998743 3332221 11111111 11 11 23455555666
Q ss_pred HHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhH
Q 013096 149 ICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSS 218 (449)
Q Consensus 149 ~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f 218 (449)
++.|.......+.... +..|. .+++..++..+..+....++..++|.+.+.+.+.. ||+..|
T Consensus 318 ~~~g~~~~~~~~~~~~-~~~~~----~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~---g~~~~f 379 (379)
T TIGR00881 318 FALGFLVYGPQMLIGV-IASEL----APKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF---GWAGAF 379 (379)
T ss_pred HHHHHHHhhhhHHHHH-HHHHh----cCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh---cccccC
Confidence 6666544332222111 23332 34455677777777667777778888888888765 776543
No 193
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.63 E-value=1.2e-06 Score=85.29 Aligned_cols=151 Identities=18% Similarity=0.195 Sum_probs=108.5
Q ss_pred hhhhhccCC--CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH
Q 013096 282 WAPTLVADG--REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCL 359 (449)
Q Consensus 282 ~~p~~~~~~--~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l 359 (449)
-.|.+.++. +..+.|.+-+++.+..-++-.+.|.++| |.++|+.+..++++.+++.++..+.. +.+...+...+
T Consensus 51 a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sD---r~npr~fm~~gLilsai~nil~Gfs~-s~~~~~~l~~l 126 (448)
T COG2271 51 AMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSD---RSNPRYFMAFGLILSAIVNILFGFSP-SLFLFAVLWVL 126 (448)
T ss_pred ccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcc---cCCCceeehHHHHHHHHHHHHHhhhh-HHHHHHHHHHH
Confidence 467776664 4567899999999999999999999999 78889988888888888777766654 44444455556
Q ss_pred HHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHH-HHHHHH--hHHhhhcchhHHHHHHH-HHHHHHHHHHHHH
Q 013096 360 FHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI-LLFLLL--RGFYRNIENAAMVAFAA-LGLFIAAGCMHVL 435 (449)
Q Consensus 360 ~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~-~~~~~~--g~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~ 435 (449)
-+..+|+.+|.+...+..-+|+++||+..|+-+..-|++. +.+++. +.+..+.+....+.+.. +++++++.++...
T Consensus 127 ng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 127 NGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred HHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 6888999999999999999999999999998888777753 333333 44444445555444443 4444444333333
Q ss_pred H
Q 013096 436 K 436 (449)
Q Consensus 436 ~ 436 (449)
|
T Consensus 207 r 207 (448)
T COG2271 207 R 207 (448)
T ss_pred C
Confidence 3
No 194
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.62 E-value=2.7e-06 Score=86.50 Aligned_cols=115 Identities=17% Similarity=0.188 Sum_probs=81.1
Q ss_pred hhhhhccCC-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc---chhHHHHHHH
Q 013096 282 WAPTLVADG-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY---QEIGILVALF 357 (449)
Q Consensus 282 ~~p~~~~~~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~~~~~~ 357 (449)
+.|.+.+.+ ++.+.|++.+.+.++..++....+++.| |+++++.+..+..+.+++.......+ ++........
T Consensus 49 ~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~d---r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 125 (438)
T TIGR00712 49 AMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSD---RSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLL 125 (438)
T ss_pred hhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhh---ccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHH
Confidence 567665433 4556788888888999999999999999 78888876666555554443332221 1222333444
Q ss_pred HHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHH
Q 013096 358 CLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 399 (449)
Q Consensus 358 ~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~ 399 (449)
++.+++.|..++.......|.+|+++||+++|+.+...+.+.
T Consensus 126 ~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~ 167 (438)
T TIGR00712 126 FLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGG 167 (438)
T ss_pred HHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHh
Confidence 556777787788788888899999999999999887777654
No 195
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.61 E-value=1.7e-05 Score=79.35 Aligned_cols=130 Identities=14% Similarity=0.110 Sum_probs=88.9
Q ss_pred HHHHHHHHHhC-CChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHH-HHHHHh-cchhHH----HHH
Q 013096 75 VFGEYELVYYG-VAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFV-GVWKSI-TAHPSV----WVA 147 (449)
Q Consensus 75 ~~~~~l~~~~g-~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~-~l~~~~-~s~~~l----~~~ 147 (449)
.+.....++.| .+...++.+.+.+.++=...-...+++-.|+|.|++++++.+.+++= .+.+.. ++.+.. ++.
T Consensus 228 ~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~ 307 (400)
T PF03825_consen 228 TFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLG 307 (400)
T ss_pred HHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 34444456777 67777787777777666665667899999999999999999888773 234444 454443 333
Q ss_pred HHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHH-HHhHHHHHHHHHHHHHHhccc
Q 013096 148 NICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMT-FFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 148 R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~-~~~~~~~i~a~~lg~~l~~~~ 209 (449)
-.++|+.-+....+... ++++. .|++..++.++..+ ..++++..+|..++|++.+.+
T Consensus 308 q~lhG~tf~~~~~a~~~-yi~~~----~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~ 365 (400)
T PF03825_consen 308 QLLHGLTFGLFHAASVR-YIDRI----APPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAF 365 (400)
T ss_pred HhhhhHHHHHHHHHHHH-HHHHh----CCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 55799998877766533 44443 35555566666544 346788888999999998865
No 196
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.61 E-value=2.2e-06 Score=83.63 Aligned_cols=150 Identities=13% Similarity=0.167 Sum_probs=107.7
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHH-HHhcchhHHHHHHHHHHhHHHHhhh
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVW-KSITAHPSVWVANICLSLASSIFSF 160 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~-~~~~s~~~l~~~R~l~Glg~~~~~~ 160 (449)
.++|++..|+........+..++++.++|.|.||+|-|+++..+.+++.+.++. .+...-.-+++.-++.|...|....
T Consensus 281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence 389999999998888888888999999999999999999999999999998873 3444444556666788888887766
Q ss_pred hhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccC
Q 013096 161 NFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTEN 239 (449)
Q Consensus 161 ~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~ 239 (449)
.+.+++ .+. .|+++-++.++..++.+-.+...||.+-+...+.. + +-|.-+....++..+.++ ++.+.|+.
T Consensus 361 ~SRSy~-~~l----vp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT-g-~~r~g~~~i~vll~iGl~-~L~~v~~~ 431 (438)
T COG2270 361 SSRSYL-ARL----VPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT-G-SSRAGVLSIIVLLLIGLL-LLLRVKVP 431 (438)
T ss_pred HHHHHH-HHh----CCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh-c-chhhHHHHHHHHHHhhHh-hEEeecCC
Confidence 655533 333 45555667788877776667788888888777655 2 345555554555555544 33445554
No 197
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.60 E-value=3.8e-06 Score=95.78 Aligned_cols=132 Identities=11% Similarity=0.028 Sum_probs=92.5
Q ss_pred HHhCCChH-HHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhh
Q 013096 82 VYYGVAKE-QMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFS 159 (449)
Q Consensus 82 ~~~g~s~~-~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~ 159 (449)
+++|.++. +.+++.+...++..+++++.|+++||+++|+++.++.++.+++.+ ....++.+.+++.-++.|++.+...
T Consensus 261 ~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 340 (1146)
T PRK08633 261 EVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFI 340 (1146)
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
Confidence 46899988 889888888888899999999999999999998887777766554 4556788888888899999988766
Q ss_pred hhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHH
Q 013096 160 FNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTA 220 (449)
Q Consensus 160 ~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~ 220 (449)
+...+ ++.+. .+.+..++.++..+....++.++++.+++.+.. . ++++...|.+
T Consensus 341 ~~~~~-~~~~~----~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~-~~~~~~~~~~ 394 (1146)
T PRK08633 341 VPLNA-LIQFR----APEKELGKVLAANNFLQNVGMLLFLALTTLFSG-L-GLSPAGLFYL 394 (1146)
T ss_pred HHHHH-HHhhc----CCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-h-ccCHHHHHHH
Confidence 55443 22222 344455666666665555555556666655533 2 2344445544
No 198
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.60 E-value=2.6e-06 Score=85.84 Aligned_cols=121 Identities=17% Similarity=0.163 Sum_probs=87.7
Q ss_pred hhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH
Q 013096 282 WAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCL 359 (449)
Q Consensus 282 ~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l 359 (449)
..|.+.++ + +..+.|++.+.+.++..++.+..+++.| |+++|+.+..+..+.+++.....+.+ +...+...-++
T Consensus 30 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d---r~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l 105 (412)
T TIGR02332 30 AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLA---IIGARRWIAGIMVLWGIASTATMFAT-GPESLYLLRIL 105 (412)
T ss_pred HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHH---HhChHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHH
Confidence 34544443 2 4566888888888999999999999999 89999887776666555554444433 33334444456
Q ss_pred HHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHh
Q 013096 360 FHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLR 406 (449)
Q Consensus 360 ~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g 406 (449)
.+++.|...|....+..|.+|+++||+++++.+...+.+...++..+
T Consensus 106 ~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T TIGR02332 106 VGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILS 152 (412)
T ss_pred HHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888888898888889999999999999998877776654454443
No 199
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.59 E-value=1.6e-06 Score=84.44 Aligned_cols=205 Identities=10% Similarity=0.032 Sum_probs=110.9
Q ss_pred ccchhHHHHHHHH-HHHHHHhhcccccCCCCCCCCCCCCCCCcchh-----hhHHHHHHHHHHHHHhhh-hhHHHHHHHH
Q 013096 10 GNRVHFLYIFIFL-SCFFSIFLLPSKSSSSSSSSLFDHSNSSSFVP-----FQRNFLLLFSLASVMEGL-WSVFGEYELV 82 (449)
Q Consensus 10 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~-~~~~~~~l~~ 82 (449)
|+.+...|.-..+ ..+.+++.....++. +. +++++.. .+++. ..+.+...| ...++..+ .+..++..++
T Consensus 171 w~~~~~i~~~~l~v~~v~~~~~~~d~p~~-r~-~~~~~~~-~~~~~v~~~~~~W~lsllY-~~tFG~Fvgfs~~l~~~~~ 246 (417)
T COG2223 171 WRNVAGIYVVALAIAAVLAWLGMNDVPEH-RA-SVKPQLP-AQLKAVFSNKDTWLLSLLY-FATFGGFVGFSAYLPMYLV 246 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhh-hc-cccccch-hHHHHHhcCcchHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 7777777655554 566666655433331 00 1111220 11121 112222233 33333222 2334555554
Q ss_pred -HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh-------cc----hhHHHHHHH
Q 013096 83 -YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI-------TA----HPSVWVANI 149 (449)
Q Consensus 83 -~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~-------~s----~~~l~~~R~ 149 (449)
+|+.++.+.|.....+-+.+.+..|.+|+||||+|.+|++++......++.. .... ++ +..++...+
T Consensus 247 ~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~ 326 (417)
T COG2223 247 TQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFV 326 (417)
T ss_pred HhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHH
Confidence 8999999988887888888888899999999999999999887666555443 2222 22 234566677
Q ss_pred HHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHH
Q 013096 150 CLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGI 229 (449)
Q Consensus 150 l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~ 229 (449)
..|+|.|..+- +++ +.+++ +.+.+.+.....++++...-|..-+...+.. + .++..|++-....+++.
T Consensus 327 ~~G~GnGsvfk-----~Ip----~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~t-g-~~~~~f~~~~~~~~~a~ 394 (417)
T COG2223 327 FAGLGNGSVFK-----MIP----VIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLT-G-SYTGAFMLLLAFYLVAL 394 (417)
T ss_pred HhccCcchhee-----ech----HHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhc-c-cHHHHHHHHHHHHHHHH
Confidence 78888775431 122 22222 3455555554444443322233333333333 1 46677776555555554
Q ss_pred H
Q 013096 230 I 230 (449)
Q Consensus 230 ~ 230 (449)
+
T Consensus 395 v 395 (417)
T COG2223 395 V 395 (417)
T ss_pred H
Confidence 4
No 200
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.57 E-value=2.3e-06 Score=97.55 Aligned_cols=137 Identities=9% Similarity=-0.050 Sum_probs=92.8
Q ss_pred HHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh----------------
Q 013096 77 GEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI---------------- 138 (449)
Q Consensus 77 ~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~---------------- 138 (449)
.|...+ .+|.++.+.|.+.+...++..+++++.|.++||.++++.+..+.++.++..+ ..+.
T Consensus 248 ~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (1140)
T PRK06814 248 LPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILV 327 (1140)
T ss_pred hHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhh
Confidence 344344 5799999999999988899999999999999999888876665555444332 2222
Q ss_pred ----cchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCc
Q 013096 139 ----TAHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGV 214 (449)
Q Consensus 139 ----~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~ 214 (449)
++.+.+.+.-++.|++.+...+...+ ++.+ ..+.+..+++++..+..+.++..+++.+++.+.... .+.
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~----~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~--~~~ 400 (1140)
T PRK06814 328 FLSKRHGWRILIDLFGLAAAGGLYIVPLFA-ALQA----WANPAHRARVIAANNVLNAAFMVAGTIILALLQALG--FSI 400 (1140)
T ss_pred hhcccccHHHHHHHHHHHHHHHHhHHHHHH-HHHh----hCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc--cCH
Confidence 67788888889999988876655443 2222 345556677777776666666667777777665321 244
Q ss_pred chhHHH
Q 013096 215 VPSSTA 220 (449)
Q Consensus 215 ~~~f~~ 220 (449)
...|.+
T Consensus 401 ~~~~~~ 406 (1140)
T PRK06814 401 PWIILF 406 (1140)
T ss_pred HHHHHH
Confidence 444443
No 201
>PRK09669 putative symporter YagG; Provisional
Probab=98.56 E-value=3.2e-06 Score=86.13 Aligned_cols=117 Identities=11% Similarity=0.086 Sum_probs=76.2
Q ss_pred HHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHH--hcchhHHHHHHHHHHhHHHHhhhhhHHHHHH
Q 013096 92 MLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKS--ITAHPSVWVANICLSLASSIFSFNFETWVAI 168 (449)
Q Consensus 92 g~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~--~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~ 168 (449)
+.+...+.++..++.+++++++||+|||+.+..+.+...+..+ ..+ .++.+.+++..++.|++.+...+...+ +++
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a-m~a 345 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS-MFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3455566677778888999999999999999888766654332 222 357777888889999999887776655 334
Q ss_pred HHHh---hcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc
Q 013096 169 EHEK---QGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 169 ~~~~---r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~ 209 (449)
|..+ ....++.-+..++..+...-++..+++.+++++.+..
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3321 1111222344556655555566667777777766543
No 202
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.55 E-value=6.4e-06 Score=84.74 Aligned_cols=146 Identities=15% Similarity=0.157 Sum_probs=108.5
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHH--HHHHHHHHHHHHH-HHHhcchhHHHHHHHHHH
Q 013096 76 FGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKV--CLIFFILHLFVGV-WKSITAHPSVWVANICLS 152 (449)
Q Consensus 76 ~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~--ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~G 152 (449)
++++...+.+.++.+...+.+.-.+.-.++.+..|+++|+...|+. ...+.+..+++.+ +.+.++++.+...-++.|
T Consensus 320 ~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG 399 (509)
T KOG2504|consen 320 YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFG 399 (509)
T ss_pred HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4456667899999999999888888889999999999999994333 3344555555554 788899999999999999
Q ss_pred hHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHH
Q 013096 153 LASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILG 228 (449)
Q Consensus 153 lg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~ 228 (449)
+..|...... .....|. .+.+++..+++.....++++.+++|++++++.+.. .+|...|+......+++
T Consensus 400 ~~~g~~~~l~-~~i~~~~----~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t--g~Y~~~f~~~g~~~~~s 468 (509)
T KOG2504|consen 400 FCVGSFSSLT-PVILVDL----VGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT--GNYDHAFYFCGLCFLLS 468 (509)
T ss_pred HHHHHHHHHH-HHHHHHH----cChhhcchHHHHHHHHhHHHHHcCcccceeeeecc--CCeeeehhhcChHHHHH
Confidence 9988654332 1122332 45567888999988899999999999999887765 24777787654443333
No 203
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.54 E-value=9.4e-06 Score=76.52 Aligned_cols=153 Identities=19% Similarity=0.109 Sum_probs=98.9
Q ss_pred HHhhhhhHHHHHHHHHhCCCh--HHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcc--hh
Q 013096 68 VMEGLWSVFGEYELVYYGVAK--EQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITA--HP 142 (449)
Q Consensus 68 ~~~~~~~~~~~~l~~~~g~s~--~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s--~~ 142 (449)
.......+..+....+++.+. .+.+...+...+...++.++.|.++||+|||+.++.+...+..+.+ +.+.++ .+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLA 95 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHH
Confidence 333444555666666776665 4678888888888888889999999999999888887766444443 555555 89
Q ss_pred HHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHH-HhHHHHHHHHHHHHHHhcccccCCcchhHHHH
Q 013096 143 SVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTF-FESAALIGGQVLANWLVGIDVKKGVVPSSTAS 221 (449)
Q Consensus 143 ~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~-~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~ 221 (449)
.+++.|+.+|++.+...+...+ ++.|..++ . +..+...+.... ....+.+++|.+++.+... ...+|+..|...
T Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 170 (338)
T COG0477 96 LLLILRLLQGLGGGGLLPVASA-LLSEWFPE-A--TERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLWGWRAAFLLA 170 (338)
T ss_pred HHHHHHHHHHhhhHHHHHHHHH-HHHHhcCc-h--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchHHHHHHH
Confidence 9999999999999877776554 34444322 0 233344443333 2344555666666655443 124777766655
Q ss_pred HHHH
Q 013096 222 VFLS 225 (449)
Q Consensus 222 ~~~~ 225 (449)
....
T Consensus 171 ~~~~ 174 (338)
T COG0477 171 ALLG 174 (338)
T ss_pred HHHH
Confidence 4443
No 204
>PRK10133 L-fucose transporter; Provisional
Probab=98.53 E-value=1.9e-05 Score=80.23 Aligned_cols=133 Identities=8% Similarity=-0.099 Sum_probs=83.8
Q ss_pred HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhh
Q 013096 83 YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFN 161 (449)
Q Consensus 83 ~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~ 161 (449)
++|.|+.+.+..+....++..++.++.|++.||+||||++..+..+..+..+ ..+.++.. -+..-.+.|++.+..+|.
T Consensus 289 ~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P~ 367 (438)
T PRK10133 289 IPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYPT 367 (438)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999998887666655444 33444432 244557889999988888
Q ss_pred hHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCC-cchhHHHHHHHHH
Q 013096 162 FETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKG-VVPSSTASVFLSI 226 (449)
Q Consensus 162 ~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g-~~~~f~~~~~~~~ 226 (449)
..+....+ .++ +.+...+... ....+..++|.+.+.+.+.. | -+..|++..+..+
T Consensus 368 ~~s~a~~~-----~~~-~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~---g~~~~~~~v~~~~~~ 423 (438)
T PRK10133 368 IFSLGIKN-----LGQ-DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAA---GNIPTAELIPALCFA 423 (438)
T ss_pred HHHHHHcc-----cch-hhccchhHHh-HHhccchHHHHHHHHHHHhc---cchHHHHHHHHHHHH
Confidence 65422211 111 1111222221 11122334556666666543 4 4566765444433
No 205
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.53 E-value=9.3e-06 Score=83.17 Aligned_cols=149 Identities=13% Similarity=-0.024 Sum_probs=84.0
Q ss_pred HHHHHHHH-HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHH--------HHHHHHH--HHHHHH-HH-hcch
Q 013096 75 VFGEYELV-YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVC--------LIFFILH--LFVGVW-KS-ITAH 141 (449)
Q Consensus 75 ~~~~~l~~-~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~l--------l~~~~~~--~~~~l~-~~-~~s~ 141 (449)
.++|..++ ++|.+..+.+...+...+...++.++.|+++||++||+.. ..+.... .+..++ .. ..+.
T Consensus 282 ~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (465)
T TIGR00894 282 TYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAF 361 (465)
T ss_pred HHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 34555544 6899999999988888889999999999999998765321 1111111 111111 11 2334
Q ss_pred hHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccC-CcchhHHH
Q 013096 142 PSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKK-GVVPSSTA 220 (449)
Q Consensus 142 ~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~-g~~~~f~~ 220 (449)
...++.-.+.+.+.+...+.. +.. ..+..++..+.+.+..+..+.+++.++|.+.+++.+.. ++ +|+..|.+
T Consensus 362 ~~~~~~~~l~~~~~~~~~~~~--~~~----~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~-~~~~~~~~f~~ 434 (465)
T TIGR00894 362 YLTIIILTLANAVSSGPLAGV--LIN----SLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQD-SKNVWLIVFLI 434 (465)
T ss_pred HHHHHHHHHHHHHhhhhhhhh--hhc----hhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCC-CchHHHHHHHH
Confidence 333333334443333222221 111 11223335677777777777777788888877776532 12 36677777
Q ss_pred HHHHHHHHHH
Q 013096 221 SVFLSILGII 230 (449)
Q Consensus 221 ~~~~~~~~~~ 230 (449)
.+...+++.+
T Consensus 435 ~~~~~~i~~i 444 (465)
T TIGR00894 435 MAFVNILCVI 444 (465)
T ss_pred HHHHHHHHHH
Confidence 6555555433
No 206
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.51 E-value=2.4e-05 Score=79.13 Aligned_cols=161 Identities=13% Similarity=-0.045 Sum_probs=92.4
Q ss_pred hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH---Hhcchh------H
Q 013096 74 SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK---SITAHP------S 143 (449)
Q Consensus 74 ~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~---~~~s~~------~ 143 (449)
..|..++.++-|+++.+...+.........+...++..+.||+|||+.++.+..+..+..+ .. ..++.. .
T Consensus 290 ~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~ 369 (485)
T KOG0569|consen 290 FFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYL 369 (485)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3455677788999998877776666677788888999999999999999998777655432 11 111111 1
Q ss_pred HHHHHHHHHhHHHHhhhhhHHHH-HHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHH
Q 013096 144 VWVANICLSLASSIFSFNFETWV-AIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASV 222 (449)
Q Consensus 144 l~~~R~l~Glg~~~~~~~~~a~~-v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~ 222 (449)
.+++.++..++.+.... .-.|+ .+|.- +++....+++.....+.+...+-+..-..+-+.. |- ..|..-+
T Consensus 370 ~i~~~~~~~~~f~~G~g-pi~~fi~aELf----~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~---g~-~~filF~ 440 (485)
T KOG0569|consen 370 CIAAIFLFIISFAIGPG-PIPWFIGAELF----PQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI---GP-YVFILFV 440 (485)
T ss_pred HHHHHHHHHHhhhcCCC-chhHHHHHHhC----CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cc-hhhHHHH
Confidence 23344444333332111 12344 45553 3334444555555444433322222222222222 32 3455555
Q ss_pred HHHHHHHHHHHhccccCCCCC
Q 013096 223 FLSILGIICVSRGWTENPKMA 243 (449)
Q Consensus 223 ~~~~~~~~~i~~~~~e~~~~~ 243 (449)
+...+..+++++..|||++++
T Consensus 441 i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 441 IPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHHHHHHHHhCcccCCCC
Confidence 555666677888999999874
No 207
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.50 E-value=8.6e-06 Score=82.16 Aligned_cols=125 Identities=6% Similarity=-0.059 Sum_probs=83.2
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHH
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSL 371 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~ 371 (449)
....+...+.+.++..++.+..+++.| |+++|+.+..+..+.+++.......+ +...++..-++.+++.+...+..
T Consensus 50 ~~~~~~~~s~~~~~~~~~~~~~G~l~d---r~Grr~~l~~~~~~~~~~~~~~~~a~-~~~~l~~~r~l~Gi~~~~~~~~~ 125 (413)
T PRK15403 50 VSLAPASVSLYLAGGMALQWLLGPLSD---RIGRRPVLITGALIFTLACAATLFTT-SMTQFLIARFIQGTSICFIATVG 125 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHH---HcCchHHHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566677778888999999999999 89988887776655555444444433 33334444445566555555555
Q ss_pred HHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHh-hhcchhHHHHH
Q 013096 372 ARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFY-RNIENAAMVAF 420 (449)
Q Consensus 372 ~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~ 420 (449)
.....|.+|+++|++.++......+++...++..|+.. +..+....+..
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~ 175 (413)
T PRK15403 126 YVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI 175 (413)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 67778889999999999988877777665566655443 44455554443
No 208
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.50 E-value=3.3e-06 Score=83.75 Aligned_cols=132 Identities=17% Similarity=0.151 Sum_probs=90.1
Q ss_pred hhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Q 013096 283 APTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLF 360 (449)
Q Consensus 283 ~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~ 360 (449)
.|.+.++ + ++.+.+...+.+.++..++..+.+++.| |+++|+.+..+..+.+++........ +.+.......+.
T Consensus 14 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---~~g~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~l~ 89 (377)
T PRK11102 14 LPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMAD---SFGRKPVILGGTLVFALAAVACALAQ-TIDQLIYMRFLH 89 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHh---hcCChHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHH
Confidence 3444433 2 4566788888888899999999999999 78888877766655555444333332 333344445566
Q ss_pred HHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHh-HHhhhcchhHHH
Q 013096 361 HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLR-GFYRNIENAAMV 418 (449)
Q Consensus 361 ~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~ 418 (449)
+++.+...+...++..|..|+|+|++++++.+...+++...++..+ .+.+..+....+
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 148 (377)
T PRK11102 90 GLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIF 148 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHH
Confidence 7777777888888999999999999999998877777655555444 334444544433
No 209
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.50 E-value=8.2e-06 Score=81.56 Aligned_cols=133 Identities=14% Similarity=0.022 Sum_probs=86.5
Q ss_pred hhhhccC--CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Q 013096 283 APTLVAD--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLF 360 (449)
Q Consensus 283 ~p~~~~~--~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~ 360 (449)
.|.+.++ .++.+.+.+.+.+.++..++..+.+++.| |+++|+.+..+..+..++.......+ +.+..+....+.
T Consensus 31 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~D---r~grr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~ 106 (394)
T PRK11652 31 IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSD---RVGRRPVILVGMSIFILGTLVALFAH-SLTVLIAASAIQ 106 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHH---hcCChHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHH
Confidence 4544433 24556788888888999999999999999 78888877766555544444333332 333344444555
Q ss_pred HHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhH-HhhhcchhHHHH
Q 013096 361 HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRG-FYRNIENAAMVA 419 (449)
Q Consensus 361 ~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~ 419 (449)
+++.+...+....+..|..|+++|++..+..+.....+...++..++ +.+..+....+.
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~ 166 (394)
T PRK11652 107 GLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYL 166 (394)
T ss_pred HhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHH
Confidence 66666666777777788888888999888877766665544444443 334445444333
No 210
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.50 E-value=3.7e-06 Score=83.39 Aligned_cols=150 Identities=15% Similarity=-0.017 Sum_probs=90.6
Q ss_pred hhhhccC--CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Q 013096 283 APTLVAD--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLF 360 (449)
Q Consensus 283 ~p~~~~~--~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~ 360 (449)
.|.+.++ -++.+.|++.+.+.++.+++....+++.| |+++|+.+............ .....++...++..-.+.
T Consensus 14 lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~D---r~grr~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~R~l~ 89 (368)
T TIGR00903 14 LSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLD---RAFKRWFLFGSLATFAAAAG-RLLDPFNYEWLLACQLLA 89 (368)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccchHHHHHHHHHHHHHHH-HHHHhccHHHHHHHHHHH
Confidence 4555443 24566788888888999999999999999 78866655433322222211 111112333344444556
Q ss_pred HHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHH-hhhcchhHHHHH-HHHHHHHHHHHHHHHHH
Q 013096 361 HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGF-YRNIENAAMVAF-AALGLFIAAGCMHVLKR 437 (449)
Q Consensus 361 ~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~ 437 (449)
+++.|.. +......+|.+|+++|++++++.+....++...++..+.. .++.+....+.. ++++++........+++
T Consensus 90 G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 90 ALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPA 167 (368)
T ss_pred HhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6777754 4444555889999999999999988877776555555444 345565554443 44444444333444443
No 211
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.49 E-value=5.7e-06 Score=81.55 Aligned_cols=115 Identities=16% Similarity=0.218 Sum_probs=77.3
Q ss_pred HHhhhh-hccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHH
Q 013096 280 ILWAPT-LVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVAL 356 (449)
Q Consensus 280 ~~~~p~-~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~ 356 (449)
..+.|. +.++ + ++.+.+++.+...++..++..+.+++.| |+++|+.+..+..+.+++.....+..++.+..+..
T Consensus 21 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (366)
T TIGR00886 21 SPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVD---KFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLL 97 (366)
T ss_pred HHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHH---HhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 345664 3332 2 4556788888888999999999999999 78888887776666555544444333133333344
Q ss_pred HHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHH
Q 013096 357 FCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 398 (449)
Q Consensus 357 ~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~ 398 (449)
.++.+++.+. .+....+..+..|+++|+++.++.....+.+
T Consensus 98 ~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 138 (366)
T TIGR00886 98 RLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMG 138 (366)
T ss_pred HHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHH
Confidence 4445555443 4456678889999999999999877555544
No 212
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.47 E-value=4.4e-06 Score=84.65 Aligned_cols=120 Identities=15% Similarity=0.078 Sum_probs=80.1
Q ss_pred hCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh--cchhHHHHHHHHHHhHHHHhhh
Q 013096 84 YGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI--TAHPSVWVANICLSLASSIFSF 160 (449)
Q Consensus 84 ~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~--~s~~~l~~~R~l~Glg~~~~~~ 160 (449)
.|.+ .+.+.......++..++.+++++++||+||||++..+..++.++.+ ..+. +|.+.+++.-++.|++.+....
T Consensus 256 l~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~ 334 (428)
T PF13347_consen 256 LGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFV 334 (428)
T ss_pred hcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccccc
Confidence 4444 4566777778888899999999999999999999999999888765 4444 4899999999999999987765
Q ss_pred hhHHHHHHHHHh---hcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 013096 161 NFETWVAIEHEK---QGQRQDILSDTFWLMTFFESAALIGGQVLANWL 205 (449)
Q Consensus 161 ~~~a~~v~~~~~---r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l 205 (449)
...+ +.+|..+ ....+++-+..++..++..-++..+++.+.+.+
T Consensus 335 ~~~a-~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 335 IPWA-MLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred cccc-ccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 5443 3333211 111223334555555544444444444444443
No 213
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.45 E-value=2.7e-06 Score=70.88 Aligned_cols=110 Identities=19% Similarity=0.112 Sum_probs=74.6
Q ss_pred HHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCC
Q 013096 301 SLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVP 380 (449)
Q Consensus 301 ~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p 380 (449)
.+.++..+++...+++.| |+++|+.+..+.....+......... +.+.......+.+++.+...+....+..|..|
T Consensus 6 ~~~~~~~~~~~~~g~~~d---~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTD---RFGRKPVLLVGLFIFVLSTAMFALSS-NITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred eehhHHHHHHhhHHHHHh---hcchhHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 345677788899999999 78888776665544444443333322 33334445566677778788888899999999
Q ss_pred CcchhHHHHhhHHHHHHHHHHHHHHh-HHhhhcch
Q 013096 381 NELRGGMISLSLAPANAAILLFLLLR-GFYRNIEN 414 (449)
Q Consensus 381 ~~~rg~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~ 414 (449)
+++|+++.+..+...+.+...++..+ ...+..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 116 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGW 116 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccch
Confidence 99999999998887777654454443 33344444
No 214
>PRK09848 glucuronide transporter; Provisional
Probab=98.45 E-value=1.3e-05 Score=81.67 Aligned_cols=125 Identities=15% Similarity=0.144 Sum_probs=81.8
Q ss_pred HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh--cchhHHHHHHHHHHhHHHHhh
Q 013096 83 YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI--TAHPSVWVANICLSLASSIFS 159 (449)
Q Consensus 83 ~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~--~s~~~l~~~R~l~Glg~~~~~ 159 (449)
.+|.++.+.+.......++..++.++.|+++||+|+|+++.++.++..++.+ ..+. ++.+.+++..++.|+|.+...
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~ 337 (448)
T PRK09848 258 VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTM 337 (448)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence 4566655444444444566778889999999999999999999887777654 3333 367777778889999988777
Q ss_pred hhhHHHHHHHHHhhc---CChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Q 013096 160 FNFETWVAIEHEKQG---QRQDILSDTFWLMTFFESAALIGGQVLANWLVGI 208 (449)
Q Consensus 160 ~~~~a~~v~~~~~r~---~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~ 208 (449)
+...+ +..|..+.+ .+++..+..++..++..-++..+++.+.+.+.+.
T Consensus 338 ~~~~a-l~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 338 TVMWA-LEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHH-HHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66544 333332111 1223345566666666666666777777666543
No 215
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.43 E-value=1.6e-06 Score=64.91 Aligned_cols=65 Identities=18% Similarity=0.198 Sum_probs=54.0
Q ss_pred HHHHHHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHH
Q 013096 64 SLASVMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFIL 128 (449)
Q Consensus 64 ~l~~~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~ 128 (449)
++-....+-..|+.+...++.|+|+.|+|.+.++..+...++.|++|.++||+||+|..+....+
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 33344444567888777789999999999999999999999999999999999999998765543
No 216
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.39 E-value=2.2e-05 Score=79.15 Aligned_cols=121 Identities=7% Similarity=0.111 Sum_probs=88.1
Q ss_pred hhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcc--cchhHHHHHHH
Q 013096 282 WAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYD--YQEIGILVALF 357 (449)
Q Consensus 282 ~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~~~~~~ 357 (449)
..|.+.++ + ++.+.|++.+....+..+++...+++.| |+++|+.+..+..+.+++....... .++.+..+...
T Consensus 25 l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~---r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~ 101 (410)
T TIGR00885 25 MVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMK---KLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGL 101 (410)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 45666543 2 4556888888888999999999999999 8999988887776665554432211 12334445556
Q ss_pred HHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHH
Q 013096 358 CLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL 405 (449)
Q Consensus 358 ~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~ 405 (449)
++.+++.|...+..+.+..+..|++.|++.+++.+...+++...++.+
T Consensus 102 ~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i 149 (410)
T TIGR00885 102 FILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVV 149 (410)
T ss_pred HHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888888888888888889999999999998887777765444443
No 217
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.35 E-value=2.5e-05 Score=80.92 Aligned_cols=106 Identities=14% Similarity=0.138 Sum_probs=77.4
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccc-----hhHHHHHHHHHHHHHhhhhh
Q 013096 294 HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQ-----EIGILVALFCLFHACVGLIL 368 (449)
Q Consensus 294 ~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~l~~~~~g~~~ 368 (449)
..+.+.+...++.++|..+.+++.| |+|+|+.+..+.++..++..+.....+ +....+..-++.+++.|...
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d---~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLAD---KLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhh
Confidence 3567777888899999999999999 899888877665544443333333221 12334455567788889889
Q ss_pred hHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHH
Q 013096 369 PSLARLRTMYVPNELRGGMISLSLAPANAAILLF 402 (449)
Q Consensus 369 p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~ 402 (449)
|....+.+|.+|++.||+++++.+.....+...+
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g 167 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAG 167 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998877666654333
No 218
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.32 E-value=8.4e-08 Score=99.30 Aligned_cols=246 Identities=11% Similarity=0.026 Sum_probs=3.0
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHH----h------------
Q 013096 76 FGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKS----I------------ 138 (449)
Q Consensus 76 ~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~----~------------ 138 (449)
.+..+.++|+++.+|.|++.+.+=++..+..++..++.+|-.|=|.+-++.++.+++++ +++ .
T Consensus 25 ~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~ 104 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSN 104 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccc
Confidence 34466679999999999999999899999999999999985444445455555444332 110 0
Q ss_pred --------------------------------c--chhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHH
Q 013096 139 --------------------------------T--AHPSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTF 184 (449)
Q Consensus 139 --------------------------------~--s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~ 184 (449)
. -++.++++.++.|+|.+..++...+ |++|+.++.. .+...
T Consensus 105 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t-YiDDnv~~~~----splYi 179 (539)
T PF03137_consen 105 GNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT-YIDDNVSKKN----SPLYI 179 (539)
T ss_dssp -----------------------------------------------SSS------------------------------
T ss_pred cccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee-eecccccccc----Cccch
Confidence 0 1467899999999999988887654 7788753332 22233
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhcccc---------------cCCcchhHHH----HHHHHHHHHHHHH---hccccCCC-
Q 013096 185 WLMTFFESAALIGGQVLANWLVGIDV---------------KKGVVPSSTA----SVFLSILGIICVS---RGWTENPK- 241 (449)
Q Consensus 185 ~~~~~~~~~~~i~a~~lg~~l~~~~~---------------~~g~~~~f~~----~~~~~~~~~~~i~---~~~~e~~~- 241 (449)
+.......+++.+|-++|+..+..+. +-+|...+|+ .+.+.++..+.+. +.+|++++
T Consensus 180 Gi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~ 259 (539)
T PF03137_consen 180 GILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSER 259 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccc
Confidence 43333444555555555555443210 1123333443 2322222222222 23333300
Q ss_pred ------C--Ccc----h----h--h-------h---hhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccCC---
Q 013096 242 ------M--AFD----D----Y--R-------T---SFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG--- 290 (449)
Q Consensus 242 ------~--~~~----~----~--~-------~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--- 290 (449)
+ +.+ + . . + ...+.+++||.++...+...+-......+ ..+.|.|++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~-~tF~pKylE~QF~~ 338 (539)
T PF03137_consen 260 QEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGF-ATFLPKYLESQFGL 338 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCC
Confidence 0 000 0 0 0 0 12456778887776655444333332233 45689998753
Q ss_pred CccchHHHHHHHH-HHHHHhhhHHHHHhcCCCCCCchhH
Q 013096 291 REVHLGLIFPSLL-GARMLGSTVFPWLISGPSSFRTEDC 328 (449)
Q Consensus 291 ~~~~~g~i~~~~~-~~~~lg~~l~~~l~~~~~~~~~~~~ 328 (449)
++...+.+.+... .+.++|..++|.+++|. |.+.++.
T Consensus 339 sas~A~~l~G~v~ip~~~~G~llGG~ivkk~-kl~~~~~ 376 (539)
T PF03137_consen 339 SASQASLLTGIVSIPGAALGILLGGYIVKKF-KLSARGA 376 (539)
T ss_dssp ---------------------------------------
T ss_pred CHHHHHHHHhhhhcchhheehheEEEEEEEe-cCcHHHH
Confidence 2233333333333 25667888888888743 3444443
No 219
>TIGR00898 2A0119 cation transport protein.
Probab=98.29 E-value=1.3e-05 Score=83.04 Aligned_cols=116 Identities=20% Similarity=0.249 Sum_probs=84.9
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHH
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSL 371 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~ 371 (449)
+...++..+.+.++.++|+.+.+++.| |+|+|+.+..+..+.+++.+...+.+ +.+..++...+.+++.+...+..
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~D---r~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~r~l~G~~~~~~~~~~ 201 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSD---RFGRKKVLLLSTLVTAVSGVLTAFSP-NYTVFLVFRLLVGMGIGGIWVQA 201 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhh---hccchHHHHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHhhccchHHHH
Confidence 345678888888999999999999999 88988887776655555544444433 34444555566778888888999
Q ss_pred HHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhh
Q 013096 372 ARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRN 411 (449)
Q Consensus 372 ~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~ 411 (449)
.++..|.+|+++|+.+.++.+.....+.+.++..+.+..+
T Consensus 202 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 241 (505)
T TIGR00898 202 VVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD 241 (505)
T ss_pred HHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 9999999999999999988876666665444444444433
No 220
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.27 E-value=4.4e-05 Score=76.60 Aligned_cols=149 Identities=12% Similarity=0.086 Sum_probs=100.5
Q ss_pred hhhhccC-C-Cccc-hHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH
Q 013096 283 APTLVAD-G-REVH-LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCL 359 (449)
Q Consensus 283 ~p~~~~~-~-~~~~-~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l 359 (449)
.|.+..+ + ++.+ .|.+++.+..+..+.....+++.| |++.|+.+..+.+.-++...+..+.. +...+.+.=++
T Consensus 49 ~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaD---rlG~K~vL~l~~l~Wsl~t~L~~fa~-Sl~~L~i~R~l 124 (511)
T TIGR00806 49 TPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTD---YLRYKPVLVLQALSFVCVWLLLLLGT-SVWHMQLMEVF 124 (511)
T ss_pred HHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHH---HhCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4544433 2 4556 899999999999999999999999 89999988776655554444433432 33334455567
Q ss_pred HHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhcc---hhHHHHHHHHHHHHHHHHHHHHH
Q 013096 360 FHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIE---NAAMVAFAALGLFIAAGCMHVLK 436 (449)
Q Consensus 360 ~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~ 436 (449)
+|++.|..+ +...++.+.+|+++|+++.|..+....++...+..++....+.+ +.....+...+..++....++++
T Consensus 125 lGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 125 YSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 788888888 88899999999999999999999888877544444333343433 23333344444444555555554
No 221
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.26 E-value=0.00053 Score=68.17 Aligned_cols=141 Identities=11% Similarity=-0.011 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHH-HHHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHH
Q 013096 89 EQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVG-VWKSITAHPSVWVANICLSLASSIFSFNFETWVA 167 (449)
Q Consensus 89 ~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~-l~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v 167 (449)
+..|.+.+.+.+.-.+.-.+..++-+|+|.|+.++++..+.++=- .+++++|.+.+.+.+.++|+-.+....+.- -++
T Consensus 259 ~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f-kYI 337 (412)
T PF01306_consen 259 QMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF-KYI 337 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 446666666666655555678999999999999999888776633 478899999999999999998876554432 244
Q ss_pred HHHHhhcCChhhHHHHHHHH-HHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccc
Q 013096 168 IEHEKQGQRQDILSDTFWLM-TFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWT 237 (449)
Q Consensus 168 ~~~~~r~~~~~~l~~~~~~~-~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~ 237 (449)
+++ ++++..+..+... +...+++.++-+.++|.+-+.. |.+..|++...+.+...++..+.++
T Consensus 338 ~~~----fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~---G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 338 TAH----FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI---GFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHH----S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHh----CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc---CcHHHHHHHHHHHHHHHHHheeeec
Confidence 443 4555555555543 3445566666677788887765 7777887655444433333333333
No 222
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.26 E-value=4e-05 Score=70.83 Aligned_cols=137 Identities=12% Similarity=0.132 Sum_probs=89.3
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhHHHHhhhh
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVWKSITAHPSVWVANICLSLASSIFSFN 161 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~~~~~s~~~l~~~R~l~Glg~~~~~~~ 161 (449)
+.+|+|+.+.+.+.+.-+..+++..|+.|.++||+||+-..+.+..+..+..=..+.-+++.=+.+..+.|++.+..-
T Consensus 293 ~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLsysllA-- 370 (459)
T KOG4686|consen 293 KRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLSYSLLA-- 370 (459)
T ss_pred HhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhhHHHHH--
Confidence 589999999898888888888889999999999999999887765554443211112233333566678888765431
Q ss_pred hHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHH
Q 013096 162 FETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVF 223 (449)
Q Consensus 162 ~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~ 223 (449)
..-|-.- +.-.|+++++.+++..+....++..+-|++++.+.+...+..|.-.|.+...
T Consensus 371 cslWP~v---a~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 371 CSLWPCV---ASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred HHHhhhh---hhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 1112110 1124566788888887777777766778888888775422334445555433
No 223
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.24 E-value=6.9e-05 Score=77.01 Aligned_cols=121 Identities=10% Similarity=0.027 Sum_probs=76.9
Q ss_pred ChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHH-----hcchhHHHHHHHHHHhHHHHhhh
Q 013096 87 AKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKS-----ITAHPSVWVANICLSLASSIFSF 160 (449)
Q Consensus 87 s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~-----~~s~~~l~~~R~l~Glg~~~~~~ 160 (449)
++.+.+.+.....++..++.+++|+++||+|||++++++..+..++.+ ... .++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 445556565655577788889999999999999999888776665543 211 24566777777888888887665
Q ss_pred hhHHHHHHHHHhhc---CChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Q 013096 161 NFETWVAIEHEKQG---QRQDILSDTFWLMTFFESAALIGGQVLANWLVGI 208 (449)
Q Consensus 161 ~~~a~~v~~~~~r~---~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~ 208 (449)
...+ +++|..+.+ ..++.-+..++..++..-++..+++.+.+++.+.
T Consensus 344 ~~~a-m~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 344 LQVI-MVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHH-HHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5433 344442111 1122234466666666555566677777766553
No 224
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.20 E-value=2.2e-05 Score=82.25 Aligned_cols=265 Identities=13% Similarity=0.055 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHhhhhhHHH----HHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHH
Q 013096 57 RNFLLLFSLASVMEGLWSVFG----EYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFV 132 (449)
Q Consensus 57 ~~~~~~~~l~~~~~~~~~~~~----~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~ 132 (449)
+.++.++.+..+.+.+..-+. -.+-+.|+++.++.|++.+.+=++..+...+..+..-|.-|-|.+-+++++.+++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lg 175 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLG 175 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHH
Confidence 344555555555554433222 2444689999999887766666666666777888888887777777777777665
Q ss_pred HH-HHHh--------------------c-----------------------------c--hh-HHHHHHHHHHhHHHHhh
Q 013096 133 GV-WKSI--------------------T-----------------------------A--HP-SVWVANICLSLASSIFS 159 (449)
Q Consensus 133 ~l-~~~~--------------------~-----------------------------s--~~-~l~~~R~l~Glg~~~~~ 159 (449)
++ +++- + + .+ .++++.++.|+|....+
T Consensus 176 sll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~ 255 (735)
T KOG3626|consen 176 SLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIF 255 (735)
T ss_pred HHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCc
Confidence 54 3210 0 0 12 57788999999998877
Q ss_pred hhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccc------------cCCcchhHHHH----HH
Q 013096 160 FNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDV------------KKGVVPSSTAS----VF 223 (449)
Q Consensus 160 ~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~------------~~g~~~~f~~~----~~ 223 (449)
+...+ +++|+.++. .....++.+.....++|++|-++|+++...+. +-+|...+|++ ..
T Consensus 256 tlGis-YiDDnvk~~----~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~ 330 (735)
T KOG3626|consen 256 TLGIS-YIDDNVKKK----NSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGA 330 (735)
T ss_pred cCCCc-ccccccccc----CCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHH
Confidence 66544 677764433 23344555555566677777777777654331 12344445543 33
Q ss_pred HHHHHHHHHHhccccCCCCC--------------cc---h---------hhhhhhHhhhcChhHHHHHHHHHHHHHHHHH
Q 013096 224 LSILGIICVSRGWTENPKMA--------------FD---D---------YRTSFFTYIFGDKRIWLLVLAQACLQFSIAL 277 (449)
Q Consensus 224 ~~~~~~~~i~~~~~e~~~~~--------------~~---~---------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 277 (449)
+.++..+.++...+|.+++. ++ + ......+.+++||.++...+...+-...+..
T Consensus 331 ~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G 410 (735)
T KOG3626|consen 331 LLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITG 410 (735)
T ss_pred HHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhh
Confidence 33333333333222222110 00 0 0012457788898888777655544433333
Q ss_pred HHHHhhhhhccCCCcc---chHHHHHHHHH-HHHHhhhHHHHHhcCCCCCCchhH
Q 013096 278 FWILWAPTLVADGREV---HLGLIFPSLLG-ARMLGSTVFPWLISGPSSFRTEDC 328 (449)
Q Consensus 278 ~~~~~~p~~~~~~~~~---~~g~i~~~~~~-~~~lg~~l~~~l~~~~~~~~~~~~ 328 (449)
+ ..++|.|++...+. ....+.+...+ +..+|..++|++++|. |.+.+..
T Consensus 411 ~-~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkf-kl~~r~~ 463 (735)
T KOG3626|consen 411 Y-ITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKF-KLSARGA 463 (735)
T ss_pred H-HHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeee-cccHHHH
Confidence 3 45689998753222 22233322222 3456777778877732 3444443
No 225
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.13 E-value=1.6e-05 Score=76.95 Aligned_cols=137 Identities=17% Similarity=0.197 Sum_probs=101.3
Q ss_pred CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhh
Q 013096 290 GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILP 369 (449)
Q Consensus 290 ~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p 369 (449)
.++.+.|++|+...+...+.+.+.|.+.| |++.+-.+.+++.++.....+.++.. +.+.++++=.+=+++......
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~---~iGy~ipm~~Gl~vmf~sTilFafg~-sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLID---RIGYKIPMVAGLFVMFLSTILFAFGN-SYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHH---HhccccHHHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHhhhhHHHHHh
Confidence 35677999999999999999999999999 89988888888777766655555543 334445455566777777788
Q ss_pred HHHHHHhccCCCcc-hhHHHHhhHHHHHHHHHHHHHHhHH-hhhcchhHHHHHHHHHHHHHHH
Q 013096 370 SLARLRTMYVPNEL-RGGMISLSLAPANAAILLFLLLRGF-YRNIENAAMVAFAALGLFIAAG 430 (449)
Q Consensus 370 ~~~~~~~~~~p~~~-rg~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~l~~~~ 430 (449)
+..++..+.+|+|. ||+++|..-...+++.+.++..|++ ++..|.+..+...++.++.-..
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~ 241 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGA 241 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHH
Confidence 88888899999875 7999999887777776666666654 5556777766665555554433
No 226
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.11 E-value=0.0052 Score=61.94 Aligned_cols=75 Identities=8% Similarity=-0.040 Sum_probs=59.0
Q ss_pred HHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHHH
Q 013096 96 CAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVWKSITAHPSVWVANICLSLASSIFSFNFETWVAIEHE 171 (449)
Q Consensus 96 ~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~ 171 (449)
++-+....+..++.+++.|+.|.|-.+.++...|..--+..+-+|-+-+++.-.+.|+|.+..+..- .-+..|+.
T Consensus 57 aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~Gq-G~ylt~~s 131 (461)
T KOG3098|consen 57 AIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQ-GGYLTSNS 131 (461)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheeccc-ceehhhcC
Confidence 3444455566778999999999999999999999876665566788999999999999999877553 33666664
No 227
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.11 E-value=4.4e-05 Score=78.30 Aligned_cols=123 Identities=10% Similarity=-0.089 Sum_probs=87.0
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH-H---------hcchhHHHHHHHH
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK-S---------ITAHPSVWVANIC 150 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~-~---------~~s~~~l~~~R~l 150 (449)
+..|.|++++|.+...+.++..++....+.+.+|++.|+++.++.++..++.+ .. . .++.+..+..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 46899999999998888899999999999999999999999999988887653 21 0 1444456666788
Q ss_pred HHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc
Q 013096 151 LSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID 209 (449)
Q Consensus 151 ~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~ 209 (449)
++++.+..+..... ++.+..+ ++..+..++..+...+++..+++.+++.+.+..
T Consensus 361 ~~~~~g~~~~~~~~-~~~~~~p----~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 361 AEVLAQLKFMPFLV-LLARLCP----SGCESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHccHHH-HHHHhCC----CCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888766655433 4444433 333445566555555666667777777776644
No 228
>PTZ00207 hypothetical protein; Provisional
Probab=98.04 E-value=0.0003 Score=73.43 Aligned_cols=149 Identities=11% Similarity=0.084 Sum_probs=84.9
Q ss_pred hhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc-----chhHHHH
Q 013096 282 WAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY-----QEIGILV 354 (449)
Q Consensus 282 ~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-----~~~~~~~ 354 (449)
..|.+.++ + +..+.+.+.... ..........|++.| |+++++++.++.++.+++.....+.. .+.+.+.
T Consensus 49 ~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~D---r~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~ 124 (591)
T PTZ00207 49 ISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYD---YLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLS 124 (591)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHH
Confidence 45555433 2 334455554432 222344557899999 89999988877666555544443321 2333344
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHH-HHHHHHhHHh-hhcchhHHHHHHHHHHHHHHHHH
Q 013096 355 ALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI-LLFLLLRGFY-RNIENAAMVAFAALGLFIAAGCM 432 (449)
Q Consensus 355 ~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~l~~~~~~ 432 (449)
+..++.+.+.+...+.......+.+| +.||++.|+.....+++. +.+++...+. ++. ....+..+..+++++...+
T Consensus 125 l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~-~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 125 VYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNT-SAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHH
Confidence 44556667777777777777788887 679999999888777764 2333333333 222 2333344444444444444
Q ss_pred HHHH
Q 013096 433 HVLK 436 (449)
Q Consensus 433 ~~~~ 436 (449)
..++
T Consensus 203 ~~vr 206 (591)
T PTZ00207 203 VFMR 206 (591)
T ss_pred hhee
Confidence 4433
No 229
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.04 E-value=4.6e-05 Score=80.98 Aligned_cols=115 Identities=12% Similarity=0.006 Sum_probs=82.6
Q ss_pred CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc-----------------------
Q 013096 291 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY----------------------- 347 (449)
Q Consensus 291 ~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~----------------------- 347 (449)
+..+.|++.+.+.++..++..+.+++.| |.+++|.+..+.++.+++.++.+..+
T Consensus 66 ss~~~G~i~s~~~i~~~~~~i~v~~~~~---r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~ 142 (633)
T TIGR00805 66 STSSSGLINGSYEIGNLLLIIFVSYFGT---KLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANS 142 (633)
T ss_pred CCCcceeeeehhhHHHHHHHHHHHHhhc---ccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccccc
Confidence 4566788888888999999999999999 78888877766655555544333221
Q ss_pred --------------------------c-hhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHH
Q 013096 348 --------------------------Q-EIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAIL 400 (449)
Q Consensus 348 --------------------------~-~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~ 400 (449)
. ....++++-++.+++.+..++...+++.|.+|++.|+..+|+......++..
T Consensus 143 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~ 222 (633)
T TIGR00805 143 FLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPA 222 (633)
T ss_pred ccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhH
Confidence 0 0112334455667777778888889999999999999999998887777655
Q ss_pred HHHHHhHH
Q 013096 401 LFLLLRGF 408 (449)
Q Consensus 401 ~~~~~g~~ 408 (449)
.+.+.+++
T Consensus 223 lG~llgg~ 230 (633)
T TIGR00805 223 FGYLLGSF 230 (633)
T ss_pred HHHHHHHH
Confidence 55555443
No 230
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.92 E-value=0.0081 Score=63.88 Aligned_cols=155 Identities=14% Similarity=0.079 Sum_probs=96.5
Q ss_pred hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh-CchHHHHHHHHHHHHHHH-HHHhc--c------hhH
Q 013096 74 SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI-GQKKVCLIFFILHLFVGV-WKSIT--A------HPS 143 (449)
Q Consensus 74 ~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~-GRr~~ll~~~~~~~~~~l-~~~~~--s------~~~ 143 (449)
..+...+.+.+|.++++...++..+....-+...++|.++|++ ||++.++.+.+++.++.+ .++.. + ...
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 3344344457888888877777766666667788999999986 999999999888877654 33321 1 123
Q ss_pred HHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccc----cCCcchhHH
Q 013096 144 VWVANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDV----KKGVVPSST 219 (449)
Q Consensus 144 l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~----~~g~~~~f~ 219 (449)
.+++=.+.++|.|..-|+..+ +..|..+. ...+...+.+........++.++++.+..++.+... ..+|...|.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsa-f~gdqf~~-~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~ 165 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSA-FGGDQFEE-RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFG 165 (654)
T ss_pred HHHHHHHHHhhccccccCchh-hhHhhcCc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHH
Confidence 555666777788777777654 33332111 112235556666555566666777776666653210 125777888
Q ss_pred HHHHHHHHHHH
Q 013096 220 ASVFLSILGII 230 (449)
Q Consensus 220 ~~~~~~~~~~~ 230 (449)
+..+..+++++
T Consensus 166 i~~i~m~ia~l 176 (654)
T TIGR00926 166 VPAILMILALI 176 (654)
T ss_pred HHHHHHHHHHH
Confidence 76666555544
No 231
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.92 E-value=9.6e-05 Score=55.96 Aligned_cols=74 Identities=8% Similarity=-0.051 Sum_probs=64.3
Q ss_pred hhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHH
Q 013096 71 GLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSV 144 (449)
Q Consensus 71 ~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l 144 (449)
...+|.+|.+.+|.++|.+|.+++.++.+++++++++....+.++..+++.+..+.+.-.++.+ +++.++++..
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 3568999999999999999999999999999999999999999998888888888888777766 7777776544
No 232
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.92 E-value=0.0021 Score=63.05 Aligned_cols=208 Identities=11% Similarity=0.009 Sum_probs=117.5
Q ss_pred HHHHHHHHHHhhcccccCCCCCCCCCCCCCCCcchh-----hhHHHHHHHHHHHHHhhhhhHHHHHHH-HHhCCChHHHH
Q 013096 19 FIFLSCFFSIFLLPSKSSSSSSSSLFDHSNSSSFVP-----FQRNFLLLFSLASVMEGLWSVFGEYEL-VYYGVAKEQMM 92 (449)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~l~-~~~g~s~~~ig 92 (449)
.+...++..+..+|+.++.++...+.++...+..++ -.++++...++.+++..+|-+.+.+.- +-||+|..|..
T Consensus 168 ~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT 247 (403)
T PF03209_consen 168 ALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETT 247 (403)
T ss_pred HHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHH
Confidence 334466666777776665421111111111111111 124556666777777777766665443 46999998877
Q ss_pred HHHHHHHHhHHHHHHHHHhhhh-hhCchHHHHHHHHHHHHHH--H--HHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHH
Q 013096 93 LLLCAGFSAALFVGSFLGMISD-LIGQKKVCLIFFILHLFVG--V--WKSITAHPSVWVANICLSLASSIFSFNFETWVA 167 (449)
Q Consensus 93 ~l~~~~~~~~~l~~~~~G~laD-r~GRr~~ll~~~~~~~~~~--l--~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v 167 (449)
.+......+.+++-...|.+.. |.|+|+...+++..-.++. + .+..++.+.+-..-++.|+|.|......-+.+.
T Consensus 248 ~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM 327 (403)
T PF03209_consen 248 RLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMM 327 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 6666555555555556677666 7888888777776655543 2 345578899999999999999986554333222
Q ss_pred HHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhccc-------ccCCcchhHHHHHHHHHHHHHH
Q 013096 168 IEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGID-------VKKGVVPSSTASVFLSILGIIC 231 (449)
Q Consensus 168 ~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~-------~~~g~~~~f~~~~~~~~~~~~~ 231 (449)
+ .. .+++.+..++.+...+..+.-++..+|+.+.+.. +..+|-..|.+-+++.+++..+
T Consensus 328 ~-lt----~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 328 D-LT----SAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred h-CC----CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 1 11 2223445566666665555445555555443311 1123444555555555555443
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.92 E-value=0.00064 Score=69.38 Aligned_cols=118 Identities=10% Similarity=0.056 Sum_probs=76.0
Q ss_pred CccchHHHHHHHHHHHHHhhhHHHHHhcCC-CCCCchhHHHHH-HHHHHHHHHHHhcccc------------h-h---HH
Q 013096 291 REVHLGLIFPSLLGARMLGSTVFPWLISGP-SSFRTEDCLLYA-FVVLGFVFSIIAYDYQ------------E-I---GI 352 (449)
Q Consensus 291 ~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~-~~~~~~~~l~~~-~~~~~~~l~~~~~~~~------------~-~---~~ 352 (449)
++...+.++.+..+..++..++.|+++||. .|+|+||..... .....+++..+.+..+ + . +.
T Consensus 37 ~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~ 116 (477)
T TIGR01301 37 PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIV 116 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHH
Confidence 445567777777778888999999999942 358888866543 3333333333333211 0 0 12
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhccCCCcch--hHHHHhhHHHHHHHHHHHHHHhHH
Q 013096 353 LVALFCLFHACVGLILPSLARLRTMYVPNELR--GGMISLSLAPANAAILLFLLLRGF 408 (449)
Q Consensus 353 ~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~r--g~~~~~~~~~~~~~~~~~~~~g~~ 408 (449)
.+..+.+..++.+...+...++..|..|+++| +.+.++.+...+++.+.+...|++
T Consensus 117 ~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~ 174 (477)
T TIGR01301 117 FVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAY 174 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23444455667777777888999999998876 467888777777776555555544
No 234
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.89 E-value=0.0022 Score=59.62 Aligned_cols=85 Identities=20% Similarity=0.115 Sum_probs=64.9
Q ss_pred hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-H--HH-----hcchhHH
Q 013096 73 WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-W--KS-----ITAHPSV 144 (449)
Q Consensus 73 ~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~--~~-----~~s~~~l 144 (449)
.+-+.+.+-+++|.|.+|...+-.+..++..+ +++.|.+.||+|.|.+++++.+...++.. . .. .+++|.+
T Consensus 21 Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~ 99 (250)
T PF06813_consen 21 FSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLM 99 (250)
T ss_pred hhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHH
Confidence 34556677789999999999988888888765 78999999999999999998877666542 1 11 1467888
Q ss_pred HHHHHHHHhHHHHh
Q 013096 145 WVANICLSLASSIF 158 (449)
Q Consensus 145 ~~~R~l~Glg~~~~ 158 (449)
.+..++.|.+.+..
T Consensus 100 ~~~~~l~~~s~~~~ 113 (250)
T PF06813_consen 100 CLFLFLGGNSSCWF 113 (250)
T ss_pred HHHHHHHcccHHHh
Confidence 87777777776543
No 235
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.87 E-value=0.00028 Score=70.62 Aligned_cols=139 Identities=18% Similarity=0.212 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHhhhhhhHHHHHHh
Q 013096 298 IFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY-QEIGILVALFCLFHACVGLILPSLARLRT 376 (449)
Q Consensus 298 i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~l~~~~~g~~~p~~~~~~~ 376 (449)
+++.+..-.-+...++||+.|| -+|.+|.+.++.++..++.+++.... .....+.+++.+..++.|+.=|+..++..
T Consensus 66 l~~~y~slVY~t~i~GG~laDr--~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg 143 (498)
T COG3104 66 LFSAYGSLVYLTPIIGGWLADR--VLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLG 143 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHH
Confidence 4444444334556677888884 47888988888777777777666553 22234556666777899999999999999
Q ss_pred ccCCCcc--hhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 013096 377 MYVPNEL--RGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAALGLFIAAGCMHVLKRW 438 (449)
Q Consensus 377 ~~~p~~~--rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 438 (449)
|.+|+++ |-+.+++..+..|++....++. +.+.++.+++..+..++++.......+...||+
T Consensus 144 ~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 144 ELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccch
Confidence 9988664 3446777777778776556554 455566777877777777777776666666655
No 236
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.85 E-value=0.0018 Score=65.29 Aligned_cols=121 Identities=21% Similarity=0.169 Sum_probs=77.9
Q ss_pred CCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh--cchhHHHHHHHHHHhHHHHhhhh
Q 013096 85 GVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI--TAHPSVWVANICLSLASSIFSFN 161 (449)
Q Consensus 85 g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~--~s~~~l~~~R~l~Glg~~~~~~~ 161 (449)
|-++.+..........+..++.+++.++++|+|||+++.++.+++.++++ ..+. ++.+.+++..++.++|.+...+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l 347 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPL 347 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccc
Confidence 33444444455555555555578899999999999999999999988775 4443 47889999999999998876655
Q ss_pred hHHHHHHHHH-----hhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Q 013096 162 FETWVAIEHE-----KQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGI 208 (449)
Q Consensus 162 ~~a~~v~~~~-----~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~ 208 (449)
.-+ +++|.. +.+.+. -+-.++.+++..=++..+++.+.++.+..
T Consensus 348 ~wa-m~~d~vDyge~~TG~R~--eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 348 PWA-MVADTVDYGEWKTGVRR--EGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred cHH-HhcchhhHHHHHhCCCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 333331 223332 34456655555444445555555555543
No 237
>PRK11462 putative transporter; Provisional
Probab=97.81 E-value=0.002 Score=65.89 Aligned_cols=72 Identities=10% Similarity=0.073 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhc--chhHHHHHHHHHHhHHHHhhh
Q 013096 89 EQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSIT--AHPSVWVANICLSLASSIFSF 160 (449)
Q Consensus 89 ~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~--s~~~l~~~R~l~Glg~~~~~~ 160 (449)
...+.+.....++..++.+++++++||+|||++...+.....+..+ ..+.+ +...+++.-++.|++.+...+
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 337 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTP 337 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666677788889999999999999997755544433332 22222 233344444566776655443
No 238
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.79 E-value=9.3e-06 Score=80.01 Aligned_cols=114 Identities=11% Similarity=0.145 Sum_probs=80.9
Q ss_pred CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhH
Q 013096 291 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPS 370 (449)
Q Consensus 291 ~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~ 370 (449)
++...|++-..+.+..++.+++++.+.| |+++++++.++..+=.++.+...+. ...|...+.=.+.++|.+.+.|.
T Consensus 66 ~~s~~Gll~~vf~v~~~i~sPl~gyLad---ryNR~~v~~vG~~iW~~Av~~~~fs-~~Fwq~~l~R~~vGiGeAs~~~i 141 (493)
T KOG1330|consen 66 SDSELGLLQTVFIVVFMIASPLFGYLAD---RYNRKRVIAVGIFIWTLAVFASGFS-NHFWQVLLCRGFVGIGEASYSPI 141 (493)
T ss_pred CchhccchhHHHHHHHHHHHHHHHHHHh---hcCcceEEeeHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhhccc
Confidence 3445677777888999999999999999 7888777766654444444433333 23343344444557777788899
Q ss_pred HHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHH
Q 013096 371 LARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGF 408 (449)
Q Consensus 371 ~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~ 408 (449)
.++++++.+|+++|++++++++.....+...+-+.|..
T Consensus 142 a~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~ 179 (493)
T KOG1330|consen 142 APSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV 179 (493)
T ss_pred chhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee
Confidence 99999999999999999999988777654334333433
No 239
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.77 E-value=0.00028 Score=73.37 Aligned_cols=124 Identities=21% Similarity=0.084 Sum_probs=89.5
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHH
Q 013096 295 LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARL 374 (449)
Q Consensus 295 ~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~ 374 (449)
.+++.+...++..+|+++.+++.| ++|+++.+..+.+...++-++.+... +...+..+=++.+++.|........+
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d---~~GRk~~l~~~~~~~~iG~ii~~~a~-~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGD---RIGRKKTLLLAVVLFLIGAIIIALAP-SWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHhccchhhhhhcchhh
Confidence 378888888999999999999999 89999888776655554444444443 44455666677788888877777788
Q ss_pred HhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhhc--chhHHHHHHH
Q 013096 375 RTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNI--ENAAMVAFAA 422 (449)
Q Consensus 375 ~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~ 422 (449)
.+|..|++.||+..+..+.....+...+...+....+. ++...+..+.
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~ 216 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLAL 216 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHH
Confidence 89999999999999999888887765555445444332 4444444433
No 240
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.00035 Score=71.13 Aligned_cols=136 Identities=15% Similarity=0.248 Sum_probs=95.5
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHhhhhhhH
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAY-DYQEIGILVALFCLFHACVGLILPS 370 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~l~~~~~g~~~p~ 370 (449)
+.+.|++++++..|.+++....+++.+ |+|.|+++..+.++.+++-++... .....+.+++.=++-|++.|..+|+
T Consensus 72 ~~~k~~i~ss~~~G~i~~~iP~g~l~~---k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa 148 (466)
T KOG2532|consen 72 STEKGLIFSSFFWGYILGQIPGGYLAD---KFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPA 148 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHH---HcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhh
Confidence 345789999999999999999999999 899999888776655544332221 1112223334445668888999999
Q ss_pred HHHHHhccCCCcchhHHHHhhHHHHHHHHHHHH-HHhHHhhh-cchhH-HHHHHHHHHHHHHH
Q 013096 371 LARLRTMYVPNELRGGMISLSLAPANAAILLFL-LLRGFYRN-IENAA-MVAFAALGLFIAAG 430 (449)
Q Consensus 371 ~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~-~~g~~~~~-~~~~~-~~~~~~~~~l~~~~ 430 (449)
+.....+-.|+++|++..++......++.+... +.|.+.+. .|.+. .++.+.++++...+
T Consensus 149 ~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~ 211 (466)
T KOG2532|consen 149 IGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFIL 211 (466)
T ss_pred hhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHH
Confidence 999999999999999999998887777654443 44555555 66544 44555666555443
No 241
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.68 E-value=0.071 Score=52.93 Aligned_cols=44 Identities=18% Similarity=-0.041 Sum_probs=31.6
Q ss_pred HHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHH
Q 013096 359 LFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLF 402 (449)
Q Consensus 359 l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~ 402 (449)
.-|+..|..+.+....+.+..|+|+|--.+|.....-+.++..+
T Consensus 344 ~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lA 387 (402)
T PF02487_consen 344 YEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLA 387 (402)
T ss_pred HHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHH
Confidence 33566677777766777888899999988888777666665433
No 242
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.61 E-value=0.004 Score=64.91 Aligned_cols=106 Identities=17% Similarity=0.136 Sum_probs=71.7
Q ss_pred hhhccC-CCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Q 013096 284 PTLVAD-GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHA 362 (449)
Q Consensus 284 p~~~~~-~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 362 (449)
|.+..| |......++.....++..++..+.|+++| .+|||.....+.++..++..+.+..+ +....+.+..+.++
T Consensus 68 ~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSD---lfGRr~~~i~g~~l~vvG~Iv~atA~-~~~~~iag~~l~Gv 143 (599)
T PF06609_consen 68 PYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSD---LFGRRYFFIIGSLLGVVGSIVCATAQ-NMNTFIAGMVLYGV 143 (599)
T ss_pred HHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHH---HhcchHHHHHHHHHHHhHHHHhhcCC-cHHHHHHHHHHHHH
Confidence 333334 44455667777777888888999999999 89988877776666555555444433 44455667777777
Q ss_pred HhhhhhhHHHHHHhccCCCcchhHHHHhhHHH
Q 013096 363 CVGLILPSLARLRTMYVPNELRGGMISLSLAP 394 (449)
Q Consensus 363 ~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~ 394 (449)
+.|... ......+|..|++.|+...++...+
T Consensus 144 gaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~ 174 (599)
T PF06609_consen 144 GAGVQE-LAALAISELVPNKWRGLGLAIASIP 174 (599)
T ss_pred hhHHHH-HHHHHHHHhcccchhhhHhHHHHHH
Confidence 776554 3344578999999997766554443
No 243
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.44 E-value=0.052 Score=52.78 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=53.7
Q ss_pred hhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhh-----hhCchHHHHH-HHHHHHHHHH-HH-------
Q 013096 71 GLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISD-----LIGQKKVCLI-FFILHLFVGV-WK------- 136 (449)
Q Consensus 71 ~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laD-----r~GRr~~ll~-~~~~~~~~~l-~~------- 136 (449)
++++ ..|.+.+.-|.|-++.+ +++..+-+.-+ -+.+.|+.| |+||||.-++ +..+.+..++ ..
T Consensus 48 GL~~-~iP~lL~ak~vSyt~~a-~fS~ay~P~sL-KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~ 124 (510)
T KOG3574|consen 48 GLIG-AIPLLLQAKGVSYTSQA-IFSFAYWPFSL-KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGL 124 (510)
T ss_pred hHhh-hhHHHhcCCCcchhhhh-hhhhhhhHHHH-HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCccc
Confidence 3444 45677777888877765 45555555433 568999999 9999998654 2222222111 11
Q ss_pred ----HhcchhHHHHHHHHHHhHHHHhhhhhHHHHHH
Q 013096 137 ----SITAHPSVWVANICLSLASSIFSFNFETWVAI 168 (449)
Q Consensus 137 ----~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~ 168 (449)
-.+|...+...-++.-+..+..-.+.+.|...
T Consensus 125 g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALt 160 (510)
T KOG3574|consen 125 GGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALT 160 (510)
T ss_pred ccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 12344444444455555555555555566543
No 244
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.40 E-value=0.0013 Score=63.54 Aligned_cols=112 Identities=14% Similarity=0.168 Sum_probs=78.4
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHH
Q 013096 295 LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARL 374 (449)
Q Consensus 295 ~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~ 374 (449)
.|++-+.+++...+.+...|.++| +.|+|.++.++....++...+.+... +....+..=.+.|...|.. ....++
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD---~yGRkpvll~c~~~va~s~ll~~~S~-~F~afv~aR~l~Gi~kgnl-~v~rAi 144 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSD---RYGRKPVLLACLIGVALSYLLWALSR-NFAAFVLARFLGGIFKGNL-SVIRAI 144 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhh---hhCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhccCch-HHHHHH
Confidence 577777888999999999999999 78888777766555555444433332 2211122123445545543 456788
Q ss_pred HhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhh
Q 013096 375 RTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRN 411 (449)
Q Consensus 375 ~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~ 411 (449)
++|.+++|.|+.+++......+++.+.++.+|++...
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 9999999999999999988888887777777776544
No 245
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.36 E-value=0.025 Score=55.46 Aligned_cols=112 Identities=16% Similarity=0.083 Sum_probs=76.8
Q ss_pred chhhhHHHHHHHHHHHHH----hhhhhHHHHHHHHH-hCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHH
Q 013096 52 FVPFQRNFLLLFSLASVM----EGLWSVFGEYELVY-YGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFF 126 (449)
Q Consensus 52 ~~~~~~~~~~~~~l~~~~----~~~~~~~~~~l~~~-~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~ 126 (449)
.+.+|++.+....++.+. |-....+.+....| .|.++.|.+...+.+..+.+++....-++-.|+...|.+....
T Consensus 230 ~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a 309 (422)
T COG0738 230 SSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYA 309 (422)
T ss_pred HHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 344555555554444432 33344555555555 7888888877777777788888877777888999999998877
Q ss_pred HHHHHHHH-HHHhcchhHHHHHHHHHHhHHHHhhhhhHH
Q 013096 127 ILHLFVGV-WKSITAHPSVWVANICLSLASSIFSFNFET 164 (449)
Q Consensus 127 ~~~~~~~l-~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a 164 (449)
+.-.+-++ .+++++...++.. ++.|+..+..+|+..+
T Consensus 310 ~~~ill~~~~~l~~g~v~~~~l-~~ig~F~simfPTIfs 347 (422)
T COG0738 310 LIAILLLLAVALIGGVVALYAL-FLIGLFNSIMFPTIFS 347 (422)
T ss_pred HHHHHHHHHHHHhcChHHHHHH-HHHHHHhHHHHHHHHH
Confidence 66555554 6677786655544 6888889998988644
No 246
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.36 E-value=0.013 Score=50.38 Aligned_cols=73 Identities=10% Similarity=-0.043 Sum_probs=57.6
Q ss_pred HHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhHHHHhhhhhHHHHHHHH
Q 013096 97 AGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGVWKSITAHPSVWVANICLSLASSIFSFNFETWVAIEH 170 (449)
Q Consensus 97 ~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l~~~~~s~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~ 170 (449)
+-+....+..++.+.+.+++|.|+.++++.+.|.+-.++-+-++.+.++.+-++.|+|.+..+.+... ++.++
T Consensus 45 i~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~-ylt~~ 117 (156)
T PF05978_consen 45 ILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGT-YLTSY 117 (156)
T ss_pred HHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhH-HHHHc
Confidence 33344455566778899999999999999999987655556688899999999999999999877543 55554
No 247
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.27 E-value=0.0042 Score=64.62 Aligned_cols=112 Identities=16% Similarity=0.047 Sum_probs=74.9
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHH
Q 013096 295 LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARL 374 (449)
Q Consensus 295 ~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~ 374 (449)
..+.-+.+.+|.++|+.+.|.++| ++|||+.+..+..+..++-...++.+ +.....+.=++.+++.+....+...+
T Consensus 120 ~~~~~s~~~~G~~vG~~i~g~lsD---~~GRk~~~~~~~~~~~i~~~~~a~a~-~~~~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 120 VALGQSLFFLGVLVGSLIFGPLSD---RFGRKPVLLVSLLLFIIFGILTAFAP-NYWMFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred HHHHHHHHHHHHHHHHhhheehHh---hcccHHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhccchhHHhHhh
Confidence 344456677899999999999999 79998888777666555444444444 33444444455666666677778888
Q ss_pred HhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhh
Q 013096 375 RTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYR 410 (449)
Q Consensus 375 ~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~ 410 (449)
..|.++++.|+.+..+.......+....+..+.+..
T Consensus 196 ~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred heeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999988833333333333333333444
No 248
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.15 E-value=0.011 Score=59.97 Aligned_cols=124 Identities=14% Similarity=0.053 Sum_probs=75.0
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHH
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSL 371 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~ 371 (449)
+.-.|..-+..-.+-++--++..++.+ +.|..+++..++.....=++...+. ++.|..+..=.+-++..+..+.+.
T Consensus 405 ~~LfGv~~a~~~~gEI~~~ffs~klI~---kiGHv~v~~lgLa~~~~Rf~~~S~L-~n~W~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 405 KTLFGVVSALCHAGEILFYFFSFKLIE---KIGHVNVMYLGLACNVGRFLYYSYL-QNPWMVLPIEILQGITHALIWAAI 480 (618)
T ss_pred ceeeeehhhhhccchHHHHHHHHHHHH---HhcccceeeehhhHHHHHHHHHHHh-cCchheeeHHHHHHHHHHHHHHHH
Confidence 344564444444455666677788888 6777676665554444333333333 344444444445577888899999
Q ss_pred HHHHhccCCCcchhHHHHhhHHHHH-HHHHHHHHHhH-HhhhcchhHHHH
Q 013096 372 ARLRTMYVPNELRGGMISLSLAPAN-AAILLFLLLRG-FYRNIENAAMVA 419 (449)
Q Consensus 372 ~~~~~~~~p~~~rg~~~~~~~~~~~-~~~~~~~~~g~-~~~~~~~~~~~~ 419 (449)
.++++...|++.|+++.++.+.... ++-..+.++|+ ..+.++..+.+-
T Consensus 481 ~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~ 530 (618)
T KOG3762|consen 481 ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFR 530 (618)
T ss_pred HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHH
Confidence 9999999999999999998776433 23222333343 345565444343
No 249
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.13 E-value=0.002 Score=62.11 Aligned_cols=91 Identities=15% Similarity=0.030 Sum_probs=52.6
Q ss_pred HHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HH--Hhcch--hHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhcCCh
Q 013096 103 LFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WK--SITAH--PSVWVANICLSLASSIFSFNFETWVAIEHEKQGQRQ 177 (449)
Q Consensus 103 ~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~--~~~s~--~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~ 177 (449)
.-+-++.|.+.||+|||+.+..+.+++++..+ .. ..+|. .+++.+|+....+....+ .|.+|. +|.
T Consensus 395 fPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaY-----vYtPEV----yPT 465 (528)
T KOG0253|consen 395 FPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAY-----VYTPEV----YPT 465 (528)
T ss_pred CCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEE-----EecCcc----cch
Confidence 34456899999999999999999888877654 22 22343 355667776554443222 122222 333
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHH
Q 013096 178 DILSDTFWLMTFFESAALIGGQVLA 202 (449)
Q Consensus 178 ~~l~~~~~~~~~~~~~~~i~a~~lg 202 (449)
...+...+.-+..+-++++++|+++
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHH
Confidence 3333333333333445567778777
No 250
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.02 E-value=0.019 Score=53.30 Aligned_cols=119 Identities=13% Similarity=0.073 Sum_probs=61.7
Q ss_pred HHHHHHHHHhhhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHH--hccc-
Q 013096 273 FSIALFWILWAPTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII--AYDY- 347 (449)
Q Consensus 273 ~~~~~~~~~~~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~--~~~~- 347 (449)
+..|.| ..|.|.+.++ + +..+...+-.+..+|.-+| .+.|.+.| +.+++..+.++.....++.... ....
T Consensus 16 Gt~Y~F-s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d---~~gp~~~l~iG~~~~~~GY~~~~l~~~~~ 90 (250)
T PF06813_consen 16 GTTYTF-SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYD---RFGPWVVLLIGAVLGFVGYGLLWLAVSGR 90 (250)
T ss_pred Ccccch-hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHH---hcchHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 344554 4567877543 2 3334444444444555554 78899999 7887776666554443333322 2221
Q ss_pred ---chhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHH
Q 013096 348 ---QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 397 (449)
Q Consensus 348 ---~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~ 397 (449)
.+.+.+....++.+.+......+......+.+| ++||++.|+......+
T Consensus 91 i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GL 142 (250)
T PF06813_consen 91 IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGL 142 (250)
T ss_pred cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHh
Confidence 122222222222222333333333333457888 5799999887655444
No 251
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.97 E-value=0.0068 Score=61.30 Aligned_cols=147 Identities=13% Similarity=0.027 Sum_probs=97.4
Q ss_pred HHhhhhhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHhcchhHHHH
Q 013096 68 VMEGLWSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSITAHPSVWV 146 (449)
Q Consensus 68 ~~~~~~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~~s~~~l~~ 146 (449)
++.++.-.+++--.+|.+-.+.-.|..-...+.+=.+.=++.+.+..++||-+++..++..+.+=.+ ....+|.|..+-
T Consensus 385 ~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLP 464 (618)
T KOG3762|consen 385 AGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLP 464 (618)
T ss_pred HHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheee
Confidence 3344444555555577776666666555555555555556789999999999999998888877544 556799999999
Q ss_pred HHHHHHhHHHHhhhhhHHHHHHHHHhhcCChhhHHHHHHHHHHH-hHHHHHHHHHHHHHHhcccccCCcchhHHHHH
Q 013096 147 ANICLSLASSIFSFNFETWVAIEHEKQGQRQDILSDTFWLMTFF-ESAALIGGQVLANWLVGIDVKKGVVPSSTASV 222 (449)
Q Consensus 147 ~R~l~Glg~~~~~~~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~-~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~ 222 (449)
..++||+..+..+.+..+ +++...+++.+ +.+.+.+... -+++-=.|.++|+.+.+.+ +-|..|.+..
T Consensus 465 ieilqgit~aliWaa~~s-Y~s~vaPp~l~----at~Q~l~~g~f~GlG~g~GslIGG~~v~~f---g~~ttf~~~g 533 (618)
T KOG3762|consen 465 IEILQGITHALIWAAIIS-YASHVAPPGLR----ATAQGLLQGIFHGLGKGLGSLIGGFVVERF---GARTTFRIFG 533 (618)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhhCCCcch----HHHHHHHHHHhcccCcchhhhhhhhhheee---hhHHHHHHHH
Confidence 999999999999877654 55544444432 2333333221 2233334667788777765 6677777643
No 252
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.85 E-value=0.016 Score=59.41 Aligned_cols=59 Identities=19% Similarity=0.178 Sum_probs=43.9
Q ss_pred HHHHHHHHH-hCCChHHHHHHHHHHHHhHHHHHHHHHhhhhh----hCchHHHHHHHHHHHHHH
Q 013096 75 VFGEYELVY-YGVAKEQMMLLLCAGFSAALFVGSFLGMISDL----IGQKKVCLIFFILHLFVG 133 (449)
Q Consensus 75 ~~~~~l~~~-~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr----~GRr~~ll~~~~~~~~~~ 133 (449)
.++|.+.++ .|.|..+.+.+-....+++.++.+.+|.++|| ..||-.......++.+..
T Consensus 294 ~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g 357 (495)
T KOG2533|consen 294 YWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIG 357 (495)
T ss_pred HHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 344555555 56888888887777888888999999999999 667666666666665543
No 253
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.68 E-value=0.35 Score=46.69 Aligned_cols=301 Identities=12% Similarity=-0.030 Sum_probs=143.9
Q ss_pred HhCCChHHHH-HHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHHHHH-HHHHhcchhHHHHHHHHHHhHHHHhhh
Q 013096 83 YYGVAKEQMM-LLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHLFVG-VWKSITAHPSVWVANICLSLASSIFSF 160 (449)
Q Consensus 83 ~~g~s~~~ig-~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~-l~~~~~s~~~l~~~R~l~Glg~~~~~~ 160 (449)
+.++++.|+. -++-...-+.++.=.+.=.+.|-.--||+++.-.+.+...- +..+.++.+.+=+.-+.-|..++...
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEI- 113 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEI- 113 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHH-
Confidence 5667776654 11111111122222244478899988998876444333322 34566888888888888887766532
Q ss_pred hhHHHHHHHHHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhccccCC
Q 013096 161 NFETWVAIEHEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENP 240 (449)
Q Consensus 161 ~~~a~~v~~~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i~~~~~e~~ 240 (449)
.+-+.. -...++++..++-+.--.....+...|..++..+++.. .+++...=.++.....++.++.. ..|..+
T Consensus 114 ----AYysYI-Ys~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~-~~sy~~LN~ISL~~~~ia~~~A~-fLP~v~ 186 (433)
T KOG3810|consen 114 ----AYYSYI-YSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLE-TLSYTTLNYISLAEVTIAVLLAL-FLPRVK 186 (433)
T ss_pred ----hhhhee-eeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhc-ccchhhhchhhHHHHHHHHHHHh-hCCCCc
Confidence 121111 01123333333333322222223344556666665532 12222111233333333333222 233222
Q ss_pred CC------Ccc-------h--hh--------------hhhhHhhhcChhHHHHHHHHHHHHHHHHHHHHHhhhhhccCC-
Q 013096 241 KM------AFD-------D--YR--------------TSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG- 290 (449)
Q Consensus 241 ~~------~~~-------~--~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~- 290 (449)
+. +++ + .+ ...++...+||+++...+.+++...+.+ -+.++...+=.+-
T Consensus 187 rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~-QV~nY~Q~LW~~~~ 265 (433)
T KOG3810|consen 187 RSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYY-QVTNYTQILWKEVA 265 (433)
T ss_pred hhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhH-HHHHHHHHHHHhhC
Confidence 10 000 0 00 1234455678888766665555443322 2233333332211
Q ss_pred ---CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhh
Q 013096 291 ---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLI 367 (449)
Q Consensus 291 ---~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~ 367 (449)
...--|..-+.......++.+..|.+--++.|.|. ..+..+.+.-+-+++++..+ +++++....+.++.....+.
T Consensus 266 ~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~-~ll~~~s~~~agllf~m~~t-~~Iw~~Ya~yvlfr~~y~l~ 343 (433)
T KOG3810|consen 266 PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGD-LLLAVGSAVQAGLLFIMAQT-QHIWVCYAGYVLFRVIYQLT 343 (433)
T ss_pred CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhH-HHHHHHHHHhhhhhhhhhcc-cceehhhhhHHHHHhhHhhh
Confidence 11223444444445556777778877653333322 22333333333333444444 35666667777776666666
Q ss_pred hhHHHHHHhccCCCcchhHHHHhhHHH
Q 013096 368 LPSLARLRTMYVPNELRGGMISLSLAP 394 (449)
Q Consensus 368 ~p~~~~~~~~~~p~~~rg~~~~~~~~~ 394 (449)
.+....-+++....|.-|-++|++...
T Consensus 344 itiA~~~iA~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 344 ITIATFQIARNLSSELFGLVFGINTFV 370 (433)
T ss_pred hhHHHHHHHHhhhhhhheeeeehHHHH
Confidence 676666666666777778888876554
No 254
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.54 E-value=0.058 Score=54.71 Aligned_cols=104 Identities=14% Similarity=0.060 Sum_probs=61.9
Q ss_pred CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHH--HH-HHhcccc-hhHHHHHHHHHHHHHhhh
Q 013096 291 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV--FS-IIAYDYQ-EIGILVALFCLFHACVGL 366 (449)
Q Consensus 291 ~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~--l~-~~~~~~~-~~~~~~~~~~l~~~~~g~ 366 (449)
+....|++.++..++.+++++.+++...|..+ .++.+..+.+++.++ +. .+.+.++ ..++++.+-++.|++.|.
T Consensus 69 ~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~--~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n 146 (488)
T KOG2325|consen 69 TATFFGLVIAASSLGHAIFSLIFGIWSNKTGS--VKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN 146 (488)
T ss_pred CcchhhHHHHHHHHHHHhcchhhcccccccCC--cccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc
Confidence 44558999999999999999999999985332 256666665544333 22 3334444 334444555555555443
Q ss_pred hhhHHHHHHhccCCCcchhHHHHhhHHHHHH
Q 013096 367 ILPSLARLRTMYVPNELRGGMISLSLAPANA 397 (449)
Q Consensus 367 ~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~ 397 (449)
. ...-++.++..-.++|-++++.......+
T Consensus 147 ~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vl 176 (488)
T KOG2325|consen 147 F-AVLRAYIADASTVEDRPRAFAATSGGFVL 176 (488)
T ss_pred H-HHHHHHHHhccCccchHHHHHHhhhHHHH
Confidence 2 33445666654556677776655443333
No 255
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.39 E-value=4.2e-05 Score=77.86 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc--chhHHHHHHHHHHHHHhhhhhhHHH
Q 013096 295 LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY--QEIGILVALFCLFHACVGLILPSLA 372 (449)
Q Consensus 295 ~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~l~~~~~g~~~p~~~ 372 (449)
.+...+...++..+|+.+.+++.| |+|||+.+..+..+..++..+..+.+ ++.......-++.|++.|...+...
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d---~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLAD---RYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHhhhcccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 466677778899999999999999 89988877766544444433333333 1333344455567888888888888
Q ss_pred HHHhccCCCcchhHHHHhhHHHHHHHH
Q 013096 373 RLRTMYVPNELRGGMISLSLAPANAAI 399 (449)
Q Consensus 373 ~~~~~~~p~~~rg~~~~~~~~~~~~~~ 399 (449)
.+..|..|++.||...++.+.....+.
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~ 151 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGI 151 (451)
T ss_pred ccccccccccccccccccccccccccc
Confidence 999999999999998888776655543
No 256
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.31 E-value=0.0066 Score=60.21 Aligned_cols=56 Identities=20% Similarity=0.198 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhh----hCchHHHHHHHHH
Q 013096 73 WSVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDL----IGQKKVCLIFFIL 128 (449)
Q Consensus 73 ~~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr----~GRr~~ll~~~~~ 128 (449)
+..++++..++.|++....+.+...+-+.+.+.+|+.|..+|| |||||..+.....
T Consensus 51 elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 51 ELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 3456677778899998888877777888889999999999995 8999998876444
No 257
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.07 E-value=0.13 Score=54.79 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc--c-----hhHHHHHHHHHHHHHhhhhh
Q 013096 296 GLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY--Q-----EIGILVALFCLFHACVGLIL 368 (449)
Q Consensus 296 g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~--~-----~~~~~~~~~~l~~~~~g~~~ 368 (449)
..++..+....-+...+.+++.|+ ++|+.+.+..+.++..++..+..... . .....+.++.+...|.|..-
T Consensus 26 ~~i~~~f~~l~yl~pilGg~iAD~--~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiK 103 (654)
T TIGR00926 26 TVLFHTFTYLCYLTPLIGAIIADG--WLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIK 103 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccc
Confidence 334444444444556677788885 67888877766555544444333211 0 11223455666678888888
Q ss_pred hHHHHHHhccCCCcc---hhHHHHhhHHHHHHHHHHHH
Q 013096 369 PSLARLRTMYVPNEL---RGGMISLSLAPANAAILLFL 403 (449)
Q Consensus 369 p~~~~~~~~~~p~~~---rg~~~~~~~~~~~~~~~~~~ 403 (449)
|+..+...+.+++++ |-+.++++....|++...+.
T Consensus 104 p~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~ 141 (654)
T TIGR00926 104 PCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLIST 141 (654)
T ss_pred cCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998887654 44556666667777654443
No 258
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.07 E-value=4.7 Score=41.29 Aligned_cols=120 Identities=13% Similarity=0.058 Sum_probs=69.1
Q ss_pred ChHHHHHHHHHHHHhHHHH-HHHHHhhhhhhCchHHHHHHHHHHHHHHH-HHHh--cchhHH----HHHH----------
Q 013096 87 AKEQMMLLLCAGFSAALFV-GSFLGMISDLIGQKKVCLIFFILHLFVGV-WKSI--TAHPSV----WVAN---------- 148 (449)
Q Consensus 87 s~~~ig~l~~~~~~~~~l~-~~~~G~laDr~GRr~~ll~~~~~~~~~~l-~~~~--~s~~~l----~~~R---------- 148 (449)
+.+++..+.+...++..+. .++.+.+++|++|++++-.....|....+ .++. |+-..+ ..-.
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 4467888888888876665 78999999999999998876655544321 1111 110000 0000
Q ss_pred ----HHHHhHHHHhhhhhHHH---HHH-H---HHhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 013096 149 ----ICLSLASSIFSFNFETW---VAI-E---HEKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLV 206 (449)
Q Consensus 149 ----~l~Glg~~~~~~~~~a~---~v~-~---~~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~ 206 (449)
.+.--.....+...|-| +++ - ...+-.+.++..|.++....++.++.+++|.+..++.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111122222221 111 0 1223356667778899888888898999998888776
No 259
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=95.05 E-value=0.033 Score=55.48 Aligned_cols=94 Identities=18% Similarity=0.303 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcc--cchh-HHHHHHH---HHHHHHhhhhh
Q 013096 295 LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYD--YQEI-GILVALF---CLFHACVGLIL 368 (449)
Q Consensus 295 ~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~--~~~~-~~~~~~~---~l~~~~~g~~~ 368 (449)
.+.+.++..++.+.|.++.|++.| ++|++++.....+++-++-.+.... .++. ..+.+.+ .+.+++.|.-+
T Consensus 86 ~~~Vn~~A~vGti~GQl~FG~lgD---~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDY 162 (538)
T KOG0252|consen 86 LALVNAAALVGTIFGQLFFGWLGD---KFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDY 162 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh---hhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCC
Confidence 466677777899999999999999 8998887655444433333222221 1121 2222222 25577888889
Q ss_pred hHHHHHHhccCCCcchhHHHHhh
Q 013096 369 PSLARLRTMYVPNELRGGMISLS 391 (449)
Q Consensus 369 p~~~~~~~~~~p~~~rg~~~~~~ 391 (449)
|...+..+|....+.||+-.+..
T Consensus 163 PlSAtI~SE~an~~~RGa~iaav 185 (538)
T KOG0252|consen 163 PLSATIMSESANKKTRGAFIAAV 185 (538)
T ss_pred cchHHHhhhhhhhccccceeEEE
Confidence 99999999999888999876654
No 260
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.06 E-value=0.38 Score=47.64 Aligned_cols=107 Identities=11% Similarity=0.073 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHH-HH--h-cch------hHHHHHHHHHHhHHHHhhhhhHHHHHHHH-HhhcCChhhHHHHHHHHH
Q 013096 120 KVCLIFFILHLFVGVW-KS--I-TAH------PSVWVANICLSLASSIFSFNFETWVAIEH-EKQGQRQDILSDTFWLMT 188 (449)
Q Consensus 120 ~~ll~~~~~~~~~~l~-~~--~-~s~------~~l~~~R~l~Glg~~~~~~~~~a~~v~~~-~~r~~~~~~l~~~~~~~~ 188 (449)
|+++.+.+++.++.++ .+ . ++. +.++++-.+.++|.|..-|+..+ +..|- ++++ +++..+.+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~-~~~dq~~~~~--~~~~~~~F~~fY 78 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISP-FGADQYDEDD--DSRRDSFFNWFY 78 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHH-HHHHCSSTTT--TTHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHH-HHHHHhcccc--hhhhhhhHHHHH
Confidence 5667777777776542 21 1 233 68899999999999988888655 33332 2221 344566777666
Q ss_pred HHhHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHH
Q 013096 189 FFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICV 232 (449)
Q Consensus 189 ~~~~~~~i~a~~lg~~l~~~~~~~g~~~~f~~~~~~~~~~~~~i 232 (449)
....++..++..+..++-+.+ ||...|.+..+..+++.+..
T Consensus 79 ~~in~G~~~~~~~~~~i~~~~---~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 79 WGINIGSLFSPTLVPYIQQNY---GWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHHHHCCCHHHHCS----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhHhhcccchhhcccc---chhhhhhHHHHHHHHHHHHH
Confidence 666777778887777776654 88888988776666655433
No 261
>PRK03612 spermidine synthase; Provisional
Probab=93.59 E-value=6.1 Score=41.16 Aligned_cols=102 Identities=15% Similarity=0.189 Sum_probs=49.8
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHH--H-HHHHHHHH-h-ccc-chh-HHHHHHHHHHHHHh
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFV--V-LGFVFSII-A-YDY-QEI-GILVALFCLFHACV 364 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~--~-~~~~l~~~-~-~~~-~~~-~~~~~~~~l~~~~~ 364 (449)
....+.+.+.++.++.+|+.+.+++.+ + ..++....-.. + .+++..+. . ... ... .......++.++..
T Consensus 49 ~~~~~~ii~~fl~glalGs~l~~~~~~---~-~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 49 VTQFSTVIGLMLFAMGVGALLSKYLLR---D-AAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh---h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677788888899999998887753 2 12222111111 1 11111110 1 111 111 11122223446788
Q ss_pred hhhhhHHHHHHhccCC---CcchhHHHHhhHHHHHH
Q 013096 365 GLILPSLARLRTMYVP---NELRGGMISLSLAPANA 397 (449)
Q Consensus 365 g~~~p~~~~~~~~~~p---~~~rg~~~~~~~~~~~~ 397 (449)
|+..|....+..+... .+.-|++++....+..+
T Consensus 125 G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~ 160 (521)
T PRK03612 125 GMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALV 160 (521)
T ss_pred HHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHH
Confidence 8899988777665432 22345556555444433
No 262
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=92.83 E-value=0.59 Score=46.72 Aligned_cols=80 Identities=13% Similarity=0.028 Sum_probs=47.2
Q ss_pred HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHH-HHHHHHHHHHHHH----HHHh-cchhHHHHHHHHHHhHHH
Q 013096 83 YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKV-CLIFFILHLFVGV----WKSI-TAHPSVWVANICLSLASS 156 (449)
Q Consensus 83 ~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~-ll~~~~~~~~~~l----~~~~-~s~~~l~~~R~l~Glg~~ 156 (449)
..|.+....|.......+++++++...|.++||...=|. .++......++.+ |..- ...+.++..-.+.|....
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~ 374 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGT 374 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhc
Confidence 445565667777777778889999999999999864333 3332222222212 2221 233455555566666665
Q ss_pred Hhhhhh
Q 013096 157 IFSFNF 162 (449)
Q Consensus 157 ~~~~~~ 162 (449)
...|..
T Consensus 375 ~~~Pig 380 (480)
T KOG2563|consen 375 GYLPIG 380 (480)
T ss_pred CCCCcc
Confidence 555553
No 263
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=92.80 E-value=0.97 Score=44.74 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcc---hhHHHHhhHHHHHHHHHHHHHHhHHh-hhcchhHHHHHHHHHHH
Q 013096 351 GILVALFCLFHACVGLILPSLARLRTMYVPNEL---RGGMISLSLAPANAAILLFLLLRGFY-RNIENAAMVAFAALGLF 426 (449)
Q Consensus 351 ~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~---rg~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~l 426 (449)
..+.+++.+..+|.|..=|+..++..|.++++. |-+.++++....|++...+...-.+. ++.++...+.++.++.+
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGML 113 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHH
Confidence 345667777889999999999999999998763 45567778888888766555433333 45667776666666666
Q ss_pred HHHHHHH
Q 013096 427 IAAGCMH 433 (449)
Q Consensus 427 ~~~~~~~ 433 (449)
++.....
T Consensus 114 ~~~~~f~ 120 (372)
T PF00854_consen 114 LALIVFL 120 (372)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554433
No 264
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=92.48 E-value=16 Score=38.47 Aligned_cols=152 Identities=11% Similarity=0.011 Sum_probs=85.6
Q ss_pred hHHHHHHHHHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhh-CchHHHHHHHHHHHHHHH-HHH---hc---------
Q 013096 74 SVFGEYELVYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLI-GQKKVCLIFFILHLFVGV-WKS---IT--------- 139 (449)
Q Consensus 74 ~~~~~~l~~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~-GRr~~ll~~~~~~~~~~l-~~~---~~--------- 139 (449)
.+.+..+..+++.+..++.-.............+.++.++|-| ||=+++.++.+++.++.. ... .+
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 4455455678888776666566666556666667899999998 899999988877765421 111 11
Q ss_pred ----------c---hhHHHHHHHHHHhHHHHhhhhhHHHHHHHHHhhc-CChhhHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 013096 140 ----------A---HPSVWVANICLSLASSIFSFNFETWVAIEHEKQG-QRQDILSDTFWLMTFFESAALIGGQVLANWL 205 (449)
Q Consensus 140 ----------s---~~~l~~~R~l~Glg~~~~~~~~~a~~v~~~~~r~-~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l 205 (449)
+ ...++.+.-+..+|.|..-++..++=.++....+ ........-+....+....+..++..+--+.
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi 217 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI 217 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence 1 1356666667777877766664432222222111 1111222344444444455555555544444
Q ss_pred hcccccCCcchhHHHHHHHHHHH
Q 013096 206 VGIDVKKGVVPSSTASVFLSILG 228 (449)
Q Consensus 206 ~~~~~~~g~~~~f~~~~~~~~~~ 228 (449)
-+. .+|..-|.+..+..+++
T Consensus 218 q~~---~~w~lgf~i~~~~~~la 237 (571)
T KOG1237|consen 218 QDN---VGWKLGFGIPTVLNALA 237 (571)
T ss_pred hhc---ccceeeccHHHHHHHHH
Confidence 333 37777777655544444
No 265
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=92.27 E-value=2.5 Score=36.23 Aligned_cols=87 Identities=13% Similarity=0.111 Sum_probs=56.1
Q ss_pred HHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchh
Q 013096 306 RMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRG 385 (449)
Q Consensus 306 ~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg 385 (449)
..+.+++.+.+.+ +++.|+.+.++.+...+- ...+...+.+.++..-.+.+++.+..+.+...++.+..+++.|+
T Consensus 50 ~~~s~l~~P~iv~---~lg~K~sm~lg~~~y~~y--~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~ 124 (156)
T PF05978_consen 50 FAISCLFAPSIVN---KLGPKWSMILGSLGYAIY--IASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIG 124 (156)
T ss_pred HHHHHHhHHHHHH---HHhhHHHHHHHHHHHHHH--HHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHh
Confidence 3455556666666 677777766654443322 22222223344555666778889999999999999998888898
Q ss_pred HHHHhhHHHHHH
Q 013096 386 GMISLSLAPANA 397 (449)
Q Consensus 386 ~~~~~~~~~~~~ 397 (449)
+-.++.-...+.
T Consensus 125 ~~~~ifw~i~~~ 136 (156)
T PF05978_consen 125 RNTGIFWAIFQS 136 (156)
T ss_pred hHHHHHHHHHHH
Confidence 877765544443
No 266
>PRK03612 spermidine synthase; Provisional
Probab=92.20 E-value=17 Score=37.96 Aligned_cols=37 Identities=8% Similarity=-0.109 Sum_probs=27.2
Q ss_pred HhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCch
Q 013096 83 YYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQK 119 (449)
Q Consensus 83 ~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr 119 (449)
-+|-+..+.+.+.+++.++..+++...|.++++--|+
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~ 80 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG 80 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Confidence 5677777788888888888888888777776443333
No 267
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=91.97 E-value=0.76 Score=34.89 Aligned_cols=63 Identities=16% Similarity=0.152 Sum_probs=43.9
Q ss_pred hhhhhccCC--CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhccc
Q 013096 282 WAPTLVADG--REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY 347 (449)
Q Consensus 282 ~~p~~~~~~--~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 347 (449)
..|.+.+++ +..+.|++-+.+.++..+|.....++.+ +.+.++.+..+.+...+.+.......
T Consensus 14 lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~---~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPR---HSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---cccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467777664 4566888889999999999999998876 44556666666555555544444443
No 268
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=91.81 E-value=4 Score=37.60 Aligned_cols=97 Identities=19% Similarity=0.239 Sum_probs=59.6
Q ss_pred chHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHhhhhhhHHH
Q 013096 294 HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQ-EIGILVALFCLFHACVGLILPSLA 372 (449)
Q Consensus 294 ~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~l~~~~~g~~~p~~~ 372 (449)
..+...........++..+.+++.| |.++++....+............+... ............+++.|...|...
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 116 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGD---RYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVAS 116 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccc---cccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHH
Confidence 4567777777788888889999999 556555554443221222122222222 222233333335667777888888
Q ss_pred HHHhccCCC-cchhHHHHhhHH
Q 013096 373 RLRTMYVPN-ELRGGMISLSLA 393 (449)
Q Consensus 373 ~~~~~~~p~-~~rg~~~~~~~~ 393 (449)
++..+..|+ +.|+...+....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 117 ALLSEWFPEATERGLAVGLVTL 138 (338)
T ss_pred HHHHHhcCchhHHHHHHHHHHH
Confidence 999999987 667887776655
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=90.37 E-value=5.5 Score=40.43 Aligned_cols=129 Identities=16% Similarity=0.139 Sum_probs=56.0
Q ss_pred hhhHHHHHhcCCCCCCch-h-HHHHHHHHHHHHHHHHhccc---chhHHHHHHHHHHHHHhhhhhhHHHHHHhcc---CC
Q 013096 309 GSTVFPWLISGPSSFRTE-D-CLLYAFVVLGFVFSIIAYDY---QEIGILVALFCLFHACVGLILPSLARLRTMY---VP 380 (449)
Q Consensus 309 g~~l~~~l~~~~~~~~~~-~-~l~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~---~p 380 (449)
-..+.|.++|...-+|.| | .+.++..+.++........+ .+.......+++..++..+..-...++..|. .|
T Consensus 40 ~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p 119 (433)
T PF03092_consen 40 IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREP 119 (433)
T ss_pred HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC
Confidence 345777788843223333 3 33334333322222222211 1222233333444555555444444444444 34
Q ss_pred CcchhHHHHhhHHHHHHHHHHHHHH-hHHhhhcchhHHH-HHHHHHHHHHHHHHHHHHHh
Q 013096 381 NELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMV-AFAALGLFIAAGCMHVLKRW 438 (449)
Q Consensus 381 ~~~rg~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~ 438 (449)
.+ ||...+........+.+.+... |.+.++.+....+ +......+.......+.+|+
T Consensus 120 ~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~ 178 (433)
T PF03092_consen 120 ES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEER 178 (433)
T ss_pred ch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhc
Confidence 44 7777776665555554334333 4444444432222 23333344333344455543
No 270
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=89.60 E-value=3.5 Score=42.15 Aligned_cols=109 Identities=12% Similarity=0.042 Sum_probs=60.5
Q ss_pred HHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCc
Q 013096 303 LGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNE 382 (449)
Q Consensus 303 ~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~ 382 (449)
++..++.+.+.|.++| +.+++..+.......-+......+. . ++.+. ..-...+.+..+....++.++...+|
T Consensus 72 ~~~~~i~s~~iG~lSD---~~grk~~L~~~~~~~~l~~~~~~~~--~-~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSD---RYGRKVVLLLPLFGTILPALCLLFQ--G-YWFFL-LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred HHHHHHHHhhhHHhhh---hhhhhhhHHHHHHHHHHhHHHHHHH--H-HHHhh-hcccccchhhhhhhhhhheeeccchh
Confidence 3456677888899999 6777665554332221111111111 1 11111 11112233445667778889999999
Q ss_pred chhHHHHhhHHHHHHHHHHHHHHhHHh-hhcchhHHH
Q 013096 383 LRGGMISLSLAPANAAILLFLLLRGFY-RNIENAAMV 418 (449)
Q Consensus 383 ~rg~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~ 418 (449)
.|...+|+.......+...++..+++. ...+....+
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f 181 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVF 181 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHH
Confidence 999999987776666655555555444 333443333
No 271
>PF12832 MFS_1_like: MFS_1 like family
Probab=88.12 E-value=3 Score=31.00 Aligned_cols=46 Identities=17% Similarity=0.369 Sum_probs=34.1
Q ss_pred hhhhccC-C-CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHH
Q 013096 283 APTLVAD-G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLY 331 (449)
Q Consensus 283 ~p~~~~~-~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~ 331 (449)
.|.+.++ | ++.+.|.+.+.......++..+.+++.| |.+++|....
T Consensus 23 l~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laD---k~~~~~~~l~ 70 (77)
T PF12832_consen 23 LPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLAD---KFGKRKVILL 70 (77)
T ss_pred hhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCccHHHHH
Confidence 4555543 3 5567888888888888999999999999 6766665443
No 272
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=87.97 E-value=28 Score=34.06 Aligned_cols=96 Identities=13% Similarity=0.128 Sum_probs=51.2
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHH
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSL 371 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~ 371 (449)
+.+.+.+|.+...+.++-+.+.|.+.| |+|+||.-....++.++.-+. -..++...++++=++.+++..+.+.+.
T Consensus 68 ~~qIa~Lf~~Gf~Ss~i~g~~~G~laD---~~Grk~~cl~~cily~~scl~--k~~~~~~~L~~GRvlgGiaTSLLfS~F 142 (354)
T PF05631_consen 68 EHQIAILFVAGFASSAIFGTFVGSLAD---RYGRKKACLLFCILYSLSCLT--KHSSNYPVLLLGRVLGGIATSLLFSAF 142 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCchHHHHHHHHHHHHHHHH--HhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 345677776666666666678888999 788777433322222222111 112233445555556666666666654
Q ss_pred HHHH-h----ccCCCcchhHHHHhhH
Q 013096 372 ARLR-T----MYVPNELRGGMISLSL 392 (449)
Q Consensus 372 ~~~~-~----~~~p~~~rg~~~~~~~ 392 (449)
-+.. . +-+|+|..+..++...
T Consensus 143 EsW~V~Eh~~~g~~~~~L~~tF~~~t 168 (354)
T PF05631_consen 143 ESWMVHEHNKRGFPQEWLSDTFSLAT 168 (354)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 4443 2 2345555555554433
No 273
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=84.40 E-value=54 Score=33.88 Aligned_cols=121 Identities=15% Similarity=0.112 Sum_probs=66.0
Q ss_pred ChHHHHHHHHHHHHh-HHHHHHHHHhhhhhhCchHHHHHHHHHHHHHH-HHH---------HhcchhHH----HHHHHHH
Q 013096 87 AKEQMMLLLCAGFSA-ALFVGSFLGMISDLIGQKKVCLIFFILHLFVG-VWK---------SITAHPSV----WVANICL 151 (449)
Q Consensus 87 s~~~ig~l~~~~~~~-~~l~~~~~G~laDr~GRr~~ll~~~~~~~~~~-l~~---------~~~s~~~l----~~~R~l~ 151 (449)
+++.+..+-....++ ..++......++||++|+++.-.....+.... +.+ +.++.... ...+.+.
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 455566555545553 34556679999999999999876655544321 111 11222111 0111122
Q ss_pred Hh-------HHHHhhhhhHHH---HHHHH----HhhcCChhhHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Q 013096 152 SL-------ASSIFSFNFETW---VAIEH----EKQGQRQDILSDTFWLMTFFESAALIGGQVLANWLVG 207 (449)
Q Consensus 152 Gl-------g~~~~~~~~~a~---~v~~~----~~r~~~~~~l~~~~~~~~~~~~~~~i~a~~lg~~l~~ 207 (449)
|. ..+..+..+|-| +++.. ..+-.+.++..+.++....++.++.++++.+..++.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 122333333433 12211 2233566677788888888888888888877777665
No 274
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=81.07 E-value=61 Score=32.16 Aligned_cols=74 Identities=15% Similarity=0.172 Sum_probs=44.7
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHHHHHHHH-Hh-CCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHH
Q 013096 54 PFQRNFLLLFSLASVMEGLWSVFGEYELV-YY-GVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFIL 128 (449)
Q Consensus 54 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~-~~-g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~ 128 (449)
+.....+..|+++..+|-++.--+ .++- ++ |=|...++.--.+-....++.+++.|-..|+..|+|++...+.+
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~V-sL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSV-SLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLL 102 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHH-HHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhh
Confidence 334445566888888887665332 3332 22 21222222222222345677788999999999999999877655
No 275
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=79.54 E-value=79 Score=32.49 Aligned_cols=34 Identities=12% Similarity=-0.045 Sum_probs=28.1
Q ss_pred HHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHH
Q 013096 370 SLARLRTMYVPNELRGGMISLSLAPANAAILLFL 403 (449)
Q Consensus 370 ~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~ 403 (449)
..+.+++|....|+-.|-+++...+.|++.+.+.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg 182 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSG 182 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778889999999888999999999998754443
No 276
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=71.13 E-value=20 Score=36.33 Aligned_cols=119 Identities=11% Similarity=0.061 Sum_probs=60.3
Q ss_pred HhhhhhccCC-CccchHHHHHHHHHHHHHhhhHHHHHhcCC-CCCCchhHHHH-HHHHHHHHHHHHhccc--------c-
Q 013096 281 LWAPTLVADG-REVHLGLIFPSLLGARMLGSTVFPWLISGP-SSFRTEDCLLY-AFVVLGFVFSIIAYDY--------Q- 348 (449)
Q Consensus 281 ~~~p~~~~~~-~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~-~~~~~~~~l~~-~~~~~~~~l~~~~~~~--------~- 348 (449)
+.+|.++.-| .+...+.+..+.-+..++-.++.|..+||. .|+++||..+. +.....+.+.+..+.. +
T Consensus 54 y~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~ 133 (498)
T KOG0637|consen 54 YLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNE 133 (498)
T ss_pred cccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCc
Confidence 3456555433 233344444333333444555666677754 36888886543 2233333333222211 1
Q ss_pred -h------hHHHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhH-HHHhhHHHHHHHH
Q 013096 349 -E------IGILVALFCLFHACVGLILPSLARLRTMYVPNELRGG-MISLSLAPANAAI 399 (449)
Q Consensus 349 -~------~~~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~-~~~~~~~~~~~~~ 399 (449)
. ....++.+-+.-++........-++..++..++.+-+ +++.+......+.
T Consensus 134 ~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGn 192 (498)
T KOG0637|consen 134 RKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGN 192 (498)
T ss_pred ccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcc
Confidence 1 1122334444445555555666677788877676666 7776655555543
No 277
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=65.26 E-value=70 Score=29.93 Aligned_cols=17 Identities=24% Similarity=0.589 Sum_probs=13.2
Q ss_pred hhhHhhhcChhHHHHHH
Q 013096 250 SFFTYIFGDKRIWLLVL 266 (449)
Q Consensus 250 ~~~~~l~~~~~~~~~~~ 266 (449)
+.+.+++|+|.++...+
T Consensus 85 ~s~~~~LK~K~tw~w~~ 101 (267)
T PF07672_consen 85 PSYKSILKEKETWKWIL 101 (267)
T ss_pred chHHHHHccchHHHHHH
Confidence 45788999999887544
No 278
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=61.98 E-value=1.8e+02 Score=29.20 Aligned_cols=85 Identities=13% Similarity=0.119 Sum_probs=44.5
Q ss_pred cchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhhhhhhHHH
Q 013096 293 VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLA 372 (449)
Q Consensus 293 ~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~p~~~ 372 (449)
.+.|.+..+..+-..+-..++++... |++..........+..+++++.++.. +.+.-+++.++.++..|..-...-
T Consensus 59 ~~t~~Vlladi~P~l~~Kl~aP~fi~---~v~y~~Ri~~~~~l~~~g~l~va~~~-~v~~~l~Gv~las~ssg~GE~tfL 134 (402)
T PF02487_consen 59 VSTGAVLLADILPSLLVKLIAPFFIH---RVPYWIRILICVALSAAGMLLVAFSP-SVWVRLLGVVLASLSSGLGEVTFL 134 (402)
T ss_pred ccchHHHHHHHHHHHHHHHHhHhhhh---hccchHHHHHHHHHHHHHHhheeecc-chhHHHHHHHHHhhhhhhhHHHHH
Confidence 33444444444445555566777776 45433222333334444555555543 444555666666777776665555
Q ss_pred HHHhccCCCc
Q 013096 373 RLRTMYVPNE 382 (449)
Q Consensus 373 ~~~~~~~p~~ 382 (449)
.+. ..+|+.
T Consensus 135 ~lt-~~y~~~ 143 (402)
T PF02487_consen 135 SLT-HFYGKS 143 (402)
T ss_pred HHH-HhcCcc
Confidence 553 455643
No 279
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=60.24 E-value=2.1e+02 Score=29.35 Aligned_cols=70 Identities=16% Similarity=0.105 Sum_probs=44.9
Q ss_pred hHHHHHHHHHhhh---hhhCchHHHHHHHHHHHHHHHHH-H-----h-------------cchhHHHHHHHHHHhHHHHh
Q 013096 101 AALFVGSFLGMIS---DLIGQKKVCLIFFILHLFVGVWK-S-----I-------------TAHPSVWVANICLSLASSIF 158 (449)
Q Consensus 101 ~~~l~~~~~G~la---Dr~GRr~~ll~~~~~~~~~~l~~-~-----~-------------~s~~~l~~~R~l~Glg~~~~ 158 (449)
+..+++.+.+.++ ||+||++++.++..+..+.++.. . + ++...-++.-+++|++-+..
T Consensus 291 g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~ 370 (461)
T KOG3098|consen 291 GEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACF 370 (461)
T ss_pred HHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHH
Confidence 3444555555555 67899999999888877665421 1 1 24556677778999998875
Q ss_pred hhhhHHHHHHHHH
Q 013096 159 SFNFETWVAIEHE 171 (449)
Q Consensus 159 ~~~~~a~~v~~~~ 171 (449)
-+.. .|.+.+..
T Consensus 371 ~t~~-~~ii~~~~ 382 (461)
T KOG3098|consen 371 NTQR-YVIIALLY 382 (461)
T ss_pred HHHH-HHHHHHHh
Confidence 5443 35555544
No 280
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=59.47 E-value=2.1 Score=44.70 Aligned_cols=46 Identities=11% Similarity=0.051 Sum_probs=0.0
Q ss_pred CccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHH
Q 013096 291 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV 339 (449)
Q Consensus 291 ~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~ 339 (449)
+..+.|++.+.+-++..+...+..++.+ |.++.|++..+.++++++
T Consensus 36 ~S~~~G~i~s~~di~~~~~~~~vsy~g~---~~hrprwig~g~~~~~~g 81 (539)
T PF03137_consen 36 SSSQSGLISSSYDIGSLVVVLFVSYFGG---RGHRPRWIGIGALLMGLG 81 (539)
T ss_dssp -------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhh---hcCCcceeeecHHHHHHH
Confidence 4566788888888888888888888877 445566666665555544
No 281
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=58.41 E-value=1.9e+02 Score=28.47 Aligned_cols=91 Identities=20% Similarity=0.229 Sum_probs=49.7
Q ss_pred hhhccCCCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHH----HHHHH--HHHHHH-HHhcccc-hhHHHHH
Q 013096 284 PTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLL----YAFVV--LGFVFS-IIAYDYQ-EIGILVA 355 (449)
Q Consensus 284 p~~~~~~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~----~~~~~--~~~~l~-~~~~~~~-~~~~~~~ 355 (449)
.+++..+.-.+.+.+.+.+..++-+|+.+...+.|. --..+.+- .+++. .+..+. ..+.... ..+++..
T Consensus 34 atyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd---~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~ 110 (508)
T COG4262 34 ATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDD---AALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYA 110 (508)
T ss_pred HHHhcCCceeehHHHHHHHHHHhchhhhhhccccCc---hHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHH
Confidence 344434445678888888888888999888877762 11111111 11110 111111 1222111 2233444
Q ss_pred HHHHHHHHhhhhhhHHHHHHhc
Q 013096 356 LFCLFHACVGLILPSLARLRTM 377 (449)
Q Consensus 356 ~~~l~~~~~g~~~p~~~~~~~~ 377 (449)
.-.+++..+|+-.|..+.+.++
T Consensus 111 lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 111 LTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHhcchHHHHHHHHH
Confidence 4456677889999998887766
No 282
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=55.50 E-value=72 Score=25.24 Aligned_cols=39 Identities=23% Similarity=0.587 Sum_probs=29.9
Q ss_pred hhhhhccCCCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchh
Q 013096 282 WAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED 327 (449)
Q Consensus 282 ~~p~~~~~~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~ 327 (449)
|.|++. +.++|-++++++...++.|.+.++..| +.++.+
T Consensus 47 ~l~Tl~----p~~fGRvYAAYGGvfI~~Sl~W~w~vd---g~~Pd~ 85 (107)
T PF02694_consen 47 WLLTLQ----PAAFGRVYAAYGGVFIVASLLWGWLVD---GVRPDR 85 (107)
T ss_pred HHhhcC----cccchhHHHHhhhhHHHHHHHHHhhhc---CcCCCh
Confidence 566653 356788899999889999999999999 455544
No 283
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=53.37 E-value=2.5e+02 Score=28.25 Aligned_cols=69 Identities=12% Similarity=-0.027 Sum_probs=35.2
Q ss_pred hHHHHHHhccCCCcchhHHHHhhHHHHHHHHHHHHHHhHHhhh---cchhHHHHHHHHHHHHHHHHHHHHHH
Q 013096 369 PSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRN---IENAAMVAFAALGLFIAAGCMHVLKR 437 (449)
Q Consensus 369 p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~ 437 (449)
.+..+++-..+|+++--++.|..|...-.+-..+.+.|.+.-+ .++.....+...+..++....+.+++
T Consensus 112 vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 112 VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3455666667788877778887777655554444444543322 23333333333333334444444443
No 284
>PRK02237 hypothetical protein; Provisional
Probab=51.63 E-value=1.2e+02 Score=24.06 Aligned_cols=40 Identities=23% Similarity=0.607 Sum_probs=29.8
Q ss_pred hhhhhccCCCccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchh
Q 013096 282 WAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED 327 (449)
Q Consensus 282 ~~p~~~~~~~~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~ 327 (449)
|.|++.. ..++|-++++++...++.+.+.++..| +.++.+
T Consensus 48 ~llTl~p---~~~~GRvYAAYGGvyI~~Sl~W~w~vd---g~~Pd~ 87 (109)
T PRK02237 48 WLLTLQP---DAAFGRVYAAYGGVYVAGSLLWLWVVD---GVRPDR 87 (109)
T ss_pred HHHhcCC---chhhhhHHHHhhhHHHHHHHHHHHHhc---CcCCCh
Confidence 5666532 134788999999889999999999999 444444
No 285
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=45.78 E-value=3.4e+02 Score=27.55 Aligned_cols=49 Identities=12% Similarity=0.018 Sum_probs=42.6
Q ss_pred HHhCCChHHHHHHHHHHHHhHHHHHHHHHhhhhhhCchHHHHHHHHHHH
Q 013096 82 VYYGVAKEQMMLLLCAGFSAALFVGSFLGMISDLIGQKKVCLIFFILHL 130 (449)
Q Consensus 82 ~~~g~s~~~ig~l~~~~~~~~~l~~~~~G~laDr~GRr~~ll~~~~~~~ 130 (449)
.+.|+|+.++|..=..+.+.+..+.....++-+|+|-.|.=+++.....
T Consensus 286 ~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~ 334 (432)
T PF06963_consen 286 KSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQW 334 (432)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHH
Confidence 4569999999998899988889989999999999999999888766544
No 286
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.40 E-value=58 Score=25.79 Aligned_cols=23 Identities=26% Similarity=0.472 Sum_probs=17.1
Q ss_pred HHHHHHHhHHHHHHHHHhhhhhh
Q 013096 94 LLCAGFSAALFVGSFLGMISDLI 116 (449)
Q Consensus 94 l~~~~~~~~~l~~~~~G~laDr~ 116 (449)
-.+.-++++.+.+...|++-|||
T Consensus 47 klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 47 KLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555666667777889999997
No 287
>PRK06073 NADH dehydrogenase subunit A; Validated
Probab=37.47 E-value=2.3e+02 Score=23.20 Aligned_cols=54 Identities=15% Similarity=0.038 Sum_probs=26.7
Q ss_pred ccccCCCCCCCCCCCCCCC---cchhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHhCCC
Q 013096 32 PSKSSSSSSSSLFDHSNSS---SFVPFQRNFLLLFSLASVMEGLWSVFGEYELVYYGVA 87 (449)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~g~s 87 (449)
|+.+++ ...++.|++..+ .-.+++.+++....+-...| .-..++++.....+.+
T Consensus 33 p~~~~~-~K~~~YEcG~~p~g~~r~~f~i~yyl~allFliFD-vEvvfLfP~av~~~~~ 89 (124)
T PRK06073 33 PSKPTP-LKVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLE-PIVVLLLLIAFAPYYT 89 (124)
T ss_pred CCCCCc-ccCCcccCCCCCCCCCCccccchHHHHHHHHHHHH-HHHHHHHHHHHHhccc
Confidence 444433 233678888544 22356666665554444444 2333444444444443
No 288
>PRK11715 inner membrane protein; Provisional
Probab=35.39 E-value=4.9e+02 Score=26.43 Aligned_cols=50 Identities=14% Similarity=0.248 Sum_probs=22.7
Q ss_pred ccchHHHHHHHHHHHHHhhhHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHhcc
Q 013096 292 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYD 346 (449)
Q Consensus 292 ~~~~g~i~~~~~~~~~lg~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 346 (449)
...+|+.|.. -..++-.++-.+.++ |.++-.-+.+++.++-.-++++++.
T Consensus 303 A~KYgiLFI~---LTF~~fFlfE~~~~~--~iHpiQYlLVGlAl~lFYLLLLSlS 352 (436)
T PRK11715 303 AVKYAILFIA---LTFAAFFLFELLKKL--RIHPVQYLLVGLALVLFYLLLLSLS 352 (436)
T ss_pred HHhHHHHHHH---HHHHHHHHHHHhcCc--eecHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456766542 233444566666543 4544444444433333223333444
No 289
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=33.16 E-value=5.3e+02 Score=26.14 Aligned_cols=48 Identities=17% Similarity=0.045 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHHH
Q 013096 352 ILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 399 (449)
Q Consensus 352 ~~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~~ 399 (449)
..++..+++++..|-.....+.+..+.+++++|-.+-.+.......++
T Consensus 374 ~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl 421 (437)
T TIGR00939 374 YFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGL 421 (437)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 334455677888887777777777777887777666555444444443
No 290
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.75 E-value=5.8e+02 Score=27.87 Aligned_cols=52 Identities=15% Similarity=0.037 Sum_probs=32.8
Q ss_pred HHHHHHHH-HhCCChHHHHHHHHHHHH-hHHHHHHHHHhhhhhhC--chHHHHHHH
Q 013096 75 VFGEYELV-YYGVAKEQMMLLLCAGFS-AALFVGSFLGMISDLIG--QKKVCLIFF 126 (449)
Q Consensus 75 ~~~~~l~~-~~g~s~~~ig~l~~~~~~-~~~l~~~~~G~laDr~G--Rr~~ll~~~ 126 (449)
.|+|...+ +||.+++....+.....+ +..++-.++|.+..|+- -|.+..+.+
T Consensus 413 tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~ 468 (735)
T KOG3626|consen 413 TFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVI 468 (735)
T ss_pred HhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHH
Confidence 35565554 899999888866644444 44455567899998874 344443333
No 291
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=31.22 E-value=6.3e+02 Score=26.35 Aligned_cols=39 Identities=8% Similarity=0.088 Sum_probs=30.0
Q ss_pred HHHHhhhhhhHHHHHHhccCCCcchhHHHHhhHHHHHHH
Q 013096 360 FHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 398 (449)
Q Consensus 360 ~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~~~~~~~~~~ 398 (449)
..+..-..+-+.++.-++..++..=||.|-+.+...|++
T Consensus 415 ~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLG 453 (544)
T PF13000_consen 415 SSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLG 453 (544)
T ss_pred HHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcC
Confidence 344444566777888889999999999999888877765
No 292
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=30.81 E-value=5.8e+02 Score=25.87 Aligned_cols=22 Identities=18% Similarity=0.027 Sum_probs=11.0
Q ss_pred HhccCCCcchhHHHHhhHHHHH
Q 013096 375 RTMYVPNELRGGMISLSLAPAN 396 (449)
Q Consensus 375 ~~~~~p~~~rg~~~~~~~~~~~ 396 (449)
.........||..++..-...+
T Consensus 370 ~~~vl~~~k~~~~~~~~L~~LY 391 (430)
T PF06123_consen 370 LSSVLKSWKRGLIFAGLLAALY 391 (430)
T ss_pred HHHHHhcchHHHHHHHHHHHHH
Confidence 3344455566666655443333
No 293
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=29.57 E-value=5.9e+02 Score=25.58 Aligned_cols=35 Identities=11% Similarity=0.135 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHH
Q 013096 353 LVALFCLFHACVGLILPSLARLRTMYVPNELRGGM 387 (449)
Q Consensus 353 ~~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~ 387 (449)
.+...+++++..|=.....+.+..+.+|++++-.+
T Consensus 346 ~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~a 380 (406)
T KOG1479|consen 346 FIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAA 380 (406)
T ss_pred HHHHHHHHHhccchHhhheehhcCCCCChHHHHHH
Confidence 34444556666664444445555566666655333
No 294
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=21.04 E-value=8.6e+02 Score=24.47 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhccCCCcchhHHHH
Q 013096 354 VALFCLFHACVGLILPSLARLRTMYVPNELRGGMIS 389 (449)
Q Consensus 354 ~~~~~l~~~~~g~~~p~~~~~~~~~~p~~~rg~~~~ 389 (449)
+...++.+.+.|....++....++ .|+|.-..+++
T Consensus 121 ~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~ 155 (406)
T KOG1479|consen 121 LIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMS 155 (406)
T ss_pred HHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHh
Confidence 344455667777777777766554 57775545443
Done!