Query 013102
Match_columns 449
No_of_seqs 152 out of 585
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 04:14:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013102.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013102hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 100.0 3.2E-25 1.1E-29 226.0 38.0 423 8-443 10-449 (460)
2 3mkt_A Multi antimicrobial ext 99.2 2.9E-11 9.9E-16 122.6 11.2 201 231-440 11-217 (460)
3 2knc_B Integrin beta-3; transm 4.6 8.1E+02 0.028 17.3 3.8 9 430-438 28-36 (79)
4 2zjs_Y Preprotein translocase 3.4 1.6E+03 0.054 21.6 5.9 21 291-312 91-111 (434)
5 2jtt_C Calcyclin-binding prote 3.3 8.8E+02 0.03 14.3 2.8 23 293-315 8-30 (35)
6 2lma_A THP5 peptide; CD4+, imm 3.3 2.9E+02 0.01 14.6 0.2 9 40-48 15-23 (26)
7 2k9j_B Integrin beta-3; transm 3.0 1E+03 0.036 14.5 4.9 20 424-443 21-40 (43)
8 2iub_A CORA, divalent cation t 2.6 1.7E+03 0.06 20.3 5.2 21 389-409 300-320 (363)
9 4ev6_A Magnesium transport pro 2.6 2.5E+03 0.085 18.9 6.2 24 390-414 277-300 (339)
10 1v54_M VIIIB, IX, cytochrome C 2.5 1.3E+03 0.044 14.5 3.4 28 131-158 16-43 (46)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.95 E-value=3.2e-25 Score=226.00 Aligned_cols=423 Identities=13% Similarity=0.060 Sum_probs=289.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhChhhhHHHHHHHHHHHHHHHHHhHHHHHHHHhccccCCCCccchhh
Q 013102 8 HSTSLSRTFKYLLATQFLSRGIPFVFNSWIVRHLTEADYAIYAVQFHLFVTCVLFLSREGFRRACMRADIKCDGASREEN 87 (449)
Q Consensus 8 ~~~~~~~~~~~~~~~q~~~~~l~fi~~~iLaRlL~p~~fGlva~~~~~~~~~~~~l~~~g~~~a~~r~~~~~~~~~~~~~ 87 (449)
..+++.+.+.+.+++++.+.+.+++.+.+++| +|||++|.++++..+.. ....+ ..|+..+..+.-.+...++|+++
T Consensus 10 ~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~-lg~~~~~~~~~~~~i~~-~~~~~-~~g~~~~~~~~is~~~g~~~~~~ 86 (460)
T 3mkt_A 10 EASNLIKLATPVLIASVAQTGMGFVDTIMAGG-VSAIDMAAVSIAASIWL-PSILF-GVGLLMALVPVVAQLNGAGRQHK 86 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH-HTTTTSSHHHHHHHHHH-HHHHH-HHHHHHHHGGGCTTTTSSSSTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHcCCChhH
Confidence 46778888999999999999999999999999 99999999999766533 22333 36777777765444322222223
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCCchh-----hHHHHHHHHHHHHHHHhhHHHHHHHhhhhhhhhhhH
Q 013102 88 AAKLLKVA-WLTLPLGIFITIGACFFVLWWQGLSYSNPY-----AQAIFINGFACVLELLAEPLYILSQNLLLLRLRLVV 161 (449)
Q Consensus 88 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~i~~l~~p~~~~~q~~~~~~~~~~~ 161 (449)
.++..+.. +.....++.++++ .............++. ...+.+++...++..+.......+|.+.|++.....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 165 (460)
T 3mkt_A 87 IPFEVHQGLILALLVSVPIIAV-LFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVI 165 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 34443332 3333444444333 2221111111112322 134555666667777666666677888888888888
Q ss_pred HHHHHHHHHHHHHhHHhh-c--cCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccCCcccccHHHHHHH
Q 013102 162 ETVATFSRCFTMCILIVK-Q--YEMEKGIVFALSQVAYAASLFLGYWGYFLLFGAFKTSDLFPFRLGNMMSYDKQLANMC 238 (449)
Q Consensus 162 ~~~~~~~~~~~~i~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~k~~l~~~ 238 (449)
...+.+.+.+....++.. . ++ +++.+.+++..+...+..+..+.+..++++.+..+.++...+.+....|+.++++
T Consensus 166 ~~~~~~~~i~l~~~li~~~~~~p~-~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 244 (460)
T 3mkt_A 166 GFIGLLLNIPLNWIFVYGKFGAPE-LGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLG 244 (460)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcc-cchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHHh
Confidence 888777777776665432 1 12 4444444444444443332222222211111110111111111223358999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccCCccchhHHHHhhhhhHHHHHHHhhhhhhhHHHHHHHhcCCCchhHHHHHHHHHH
Q 013102 239 TLFTFQSFRKLLLQEGEKLVLVWLDTPYNQAVYGLVDKLGSLVVRMVFLPFEESSYATFARSASGQYPQKSKKIGNSLAE 318 (449)
Q Consensus 239 ~~l~~~~i~~~~~~~~d~l~ig~~~~~~~~G~Y~~A~~l~~l~~~~~~~pi~~~~~p~fs~~~~~~~~~~~~~l~~~~~~ 318 (449)
.|.+.+++...+..+.|+.+++++ |++++|.|+.++++.+++. .+..++.++..|..++...++|+|+.+ +..++
T Consensus 245 ~p~~~~~~~~~~~~~~~~~~~~~~-g~~~va~~~i~~~i~~~~~-~~~~~~~~a~~p~i~~~~g~~~~~~~~---~~~~~ 319 (460)
T 3mkt_A 245 FPVAAALFFEVTLFAVVALLVAPL-GSTVVAAHQVALNFSSLVF-MFPMSIGAAVSIRVGHKLGEQDTKGAA---IAANV 319 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTT-SSHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHSSCCCTTT---THHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHH---HHHHH
Confidence 999999999999999999999999 9999999999999998876 777789999999999998776655544 46777
Q ss_pred HHHHHHHHHHHHHHhhhcchHHHHHHHhcCCcCCCchhHHHHHHHHHHHHHhhhhHHHHHHHHhcChhHHHHhhhHHHHH
Q 013102 319 ALKLVLLIGLVFMAFGPSYSYSLVRLLYGKKWSDGEASTALRYYCLYVVVLAMNGTSEAFLHAVATEDQLKRSNDSLLVF 398 (449)
Q Consensus 319 ~~~~~~~i~~~~~~~~~~~a~~iv~ll~G~~w~~a~~~~il~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~i~ 398 (449)
..+....+++|...+....+++++.++.+|+.......+++++++...++.+++......+.+.++++.....+ .+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~ 396 (460)
T 3mkt_A 320 GLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRT---FIS 396 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH---HHH
Confidence 88888888888888888889999998887764322234789999998888888888888888888886644332 344
Q ss_pred H-HHHHHHHHHHHHh-------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 013102 399 S-VIYIVMNVILIQS-------AGSVGLILANSLNMILRIIYSAIFIKHYFQV 443 (449)
Q Consensus 399 ~-ii~i~l~~~li~~-------~G~~G~~~a~~i~~~~~~~~~~~~~~~~~~~ 443 (449)
. ++++++++++++. +|..|+.+|..++..++......+.+|..++
T Consensus 397 ~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~~~~ 449 (460)
T 3mkt_A 397 YWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQKQ 449 (460)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSSCCS
T ss_pred HHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4 7889999999998 9999999999999999988887666655443
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.23 E-value=2.9e-11 Score=122.59 Aligned_cols=201 Identities=11% Similarity=0.076 Sum_probs=148.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCccchhHHHHhhhhhHHHHHHHhhhhhhhHHHHHHHhcCCCchhHH
Q 013102 231 DKQLANMCTLFTFQSFRKLLLQEGEKLVLVWLDTPYNQAVYGLVDKLGSLVVRMVFLPFEESSYATFARSASGQYPQKSK 310 (449)
Q Consensus 231 ~k~~l~~~~~l~~~~i~~~~~~~~d~l~ig~~~~~~~~G~Y~~A~~l~~l~~~~~~~pi~~~~~p~fs~~~~~~~~~~~~ 310 (449)
.|+.+++++|++.+++...+++..|+.++|+ .|++++|.|+.+.++.... ..+...+.....|..++...++|+++
T Consensus 11 ~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~-lg~~~~~~~~~~~~i~~~~-~~~~~g~~~~~~~~is~~~g~~~~~~-- 86 (460)
T 3mkt_A 11 ASNLIKLATPVLIASVAQTGMGFVDTIMAGG-VSAIDMAAVSIAASIWLPS-ILFGVGLLMALVPVVAQLNGAGRQHK-- 86 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH-HTTTTSSHHHHHHHHHHHH-HHHHHHHHHHHGGGCTTTTSSSSTTT--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChhH--
Confidence 4789999999999999999999999999999 8999999999999996544 35666788888888888765554443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhcCCcCCCchhHHHHHHHHHHHHHhhhhHHHHHHHHhcChhHHHH
Q 013102 311 KIGNSLAEALKLVLLIGLVFMAFGPSYSYSLVRLLYGKKWSDGEASTALRYYCLYVVVLAMNGTSEAFLHAVATEDQLKR 390 (449)
Q Consensus 311 ~l~~~~~~~~~~~~~i~~~~~~~~~~~a~~iv~ll~G~~w~~a~~~~il~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 390 (449)
.++.++..+.+...++++...+ ...+++++..+.+++-.......+++++++..++..++.....++++.++.+.
T Consensus 87 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~--- 161 (460)
T 3mkt_A 87 -IPFEVHQGLILALLVSVPIIAV-LFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKP--- 161 (460)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTT---
T ss_pred -HHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH---
Confidence 3346666777777777665544 45667777654333211111235777777777777777666555555555533
Q ss_pred hhhHHHHHHHHHHHHHHHHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013102 391 SNDSLLVFSVIYIVMNVILIQ------SAGSVGLILANSLNMILRIIYSAIFIKHY 440 (449)
Q Consensus 391 ~~~~~~i~~ii~i~l~~~li~------~~G~~G~~~a~~i~~~~~~~~~~~~~~~~ 440 (449)
......+..+++++++++++. .+|..|+++|+.++..+.......+.++.
T Consensus 162 ~~~~~~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~ 217 (460)
T 3mkt_A 162 AMVIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTS 217 (460)
T ss_dssp THHHHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 333445677899999999986 48999999999999998888888777654
No 3
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=4.65 E-value=8.1e+02 Score=17.33 Aligned_cols=9 Identities=0% Similarity=-0.101 Sum_probs=3.8
Q ss_pred HHHHHHHHH
Q 013102 430 IIYSAIFIK 438 (449)
Q Consensus 430 ~~~~~~~~~ 438 (449)
+...|+...
T Consensus 28 llliwk~~~ 36 (79)
T 2knc_B 28 ALLIWKLLI 36 (79)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 334444443
No 4
>2zjs_Y Preprotein translocase SECY subunit; translocon, SEC, protein-conducting-channel, membrane, prote transport, translocation, transmembrane, transport; 3.20A {Thermus thermophilus} PDB: 2zqp_Y
Probab=3.43 E-value=1.6e+03 Score=21.57 Aligned_cols=21 Identities=5% Similarity=0.080 Sum_probs=12.4
Q ss_pred hhhHHHHHHHhcCCCchhHHHH
Q 013102 291 ESSYATFARSASGQYPQKSKKI 312 (449)
Q Consensus 291 ~~~~p~fs~~~~~~~~~~~~~l 312 (449)
....|.+.++.+|+ +++.+++
T Consensus 91 ~~vip~l~~l~keG-e~Gr~ki 111 (434)
T 2zjs_Y 91 VTVVPALEKLSKEG-EEGRRII 111 (434)
T ss_dssp HHHSHHHHHHHTSH-HHHHHHH
T ss_pred HHHhcchhhhhhcC-HHHHHHH
Confidence 44578888886553 3334444
No 5
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=3.28 E-value=8.8e+02 Score=14.31 Aligned_cols=23 Identities=4% Similarity=0.034 Sum_probs=14.0
Q ss_pred hHHHHHHHhcCCCchhHHHHHHH
Q 013102 293 SYATFARSASGQYPQKSKKIGNS 315 (449)
Q Consensus 293 ~~p~fs~~~~~~~~~~~~~l~~~ 315 (449)
+...|.+++.+.+++-++.+.+.
T Consensus 8 l~~~fk~iY~~gddd~kram~KS 30 (35)
T 2jtt_C 8 LMNVLKKIYEDGDDDMKRTINKA 30 (35)
T ss_dssp HHHHHHHHHTTCCSSHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHH
Confidence 34556778877766655544443
No 6
>2lma_A THP5 peptide; CD4+, immune system; NMR {Synthetic}
Probab=3.26 E-value=2.9e+02 Score=14.60 Aligned_cols=9 Identities=0% Similarity=0.342 Sum_probs=5.9
Q ss_pred hhChhhhHH
Q 013102 40 HLTEADYAI 48 (449)
Q Consensus 40 lL~p~~fGl 48 (449)
.++|.+||.
T Consensus 15 visppefg~ 23 (26)
T 2lma_A 15 VISPPEFGX 23 (26)
T ss_dssp TSSGGGGC-
T ss_pred EeCCccccc
Confidence 467888885
No 7
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=2.96 E-value=1e+03 Score=14.54 Aligned_cols=20 Identities=10% Similarity=-0.041 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHhhhc
Q 013102 424 LNMILRIIYSAIFIKHYFQV 443 (449)
Q Consensus 424 i~~~~~~~~~~~~~~~~~~~ 443 (449)
+-..+-....|++..+..+.
T Consensus 21 vliGl~lLliwk~~~~i~Dr 40 (43)
T 2k9j_B 21 LLIGLAALLIWKLLITIHDR 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHheehh
Confidence 33344445556666554443
No 8
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=2.60 E-value=1.7e+03 Score=20.25 Aligned_cols=21 Identities=14% Similarity=0.341 Sum_probs=12.4
Q ss_pred HHhhhHHHHHHHHHHHHHHHH
Q 013102 389 KRSNDSLLVFSVIYIVMNVIL 409 (449)
Q Consensus 389 ~~~~~~~~i~~ii~i~l~~~l 409 (449)
....+.+.+.++++++++++.
T Consensus 300 N~imk~LTiit~IflP~T~Ia 320 (363)
T 2iub_A 300 NEVMKVLTIIATIFMPLTFIA 320 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334445556666777776654
No 9
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=2.55 E-value=2.5e+03 Score=18.87 Aligned_cols=24 Identities=21% Similarity=0.105 Sum_probs=13.7
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHhhh
Q 013102 390 RSNDSLLVFSVIYIVMNVILIQSAG 414 (449)
Q Consensus 390 ~~~~~~~i~~ii~i~l~~~li~~~G 414 (449)
+..+.+.+.++++++++++.+ .||
T Consensus 277 ~~mk~LTiit~IflP~T~IaG-iyG 300 (339)
T 4ev6_A 277 QIMKILTMVTTIFAVPMWITG-IYG 300 (339)
T ss_dssp HHHHHHHHHHHHSSHHHHHHH-HTT
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hcc
Confidence 334455566667777777643 344
No 10
>1v54_M VIIIB, IX, cytochrome C oxidase polypeptide VIII-heart; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.7.1 PDB: 1oco_M* 1occ_M* 1ocz_M* 1ocr_M* 1v55_M* 2dyr_M* 2dys_M* 2eij_M* 2eik_M* 2eil_M* 2eim_M* 2ein_M* 2occ_M* 2ybb_X* 2zxw_M* 3abk_M* 3abl_M* 3abm_M* 3ag1_M* 3ag2_M* ...
Probab=2.46 E-value=1.3e+03 Score=14.54 Aligned_cols=28 Identities=11% Similarity=-0.017 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhhhhhhh
Q 013102 131 INGFACVLELLAEPLYILSQNLLLLRLR 158 (449)
Q Consensus 131 ~~~~~~~i~~l~~p~~~~~q~~~~~~~~ 158 (449)
+.++..++..+..|.-..+..-++||.+
T Consensus 16 aigl~v~f~~~L~PagWVLshL~~YKk~ 43 (46)
T 1v54_M 16 AIGLSVTFLSFLLPAGWVLYHLDNYKKS 43 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHTC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhccc
Done!