Query 013104
Match_columns 449
No_of_seqs 197 out of 1412
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 04:16:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013104.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013104hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k4i_A 3,4-dihydroxy-2-butanon 100.0 3.4E-77 1.2E-81 571.8 18.1 208 105-314 9-228 (233)
2 3mio_A DHBP synthase, 3,4-dihy 100.0 5E-77 1.7E-81 563.4 18.8 203 106-310 2-206 (206)
3 1tks_A 3,4-dihydroxy-2-butanon 100.0 7.6E-77 2.6E-81 561.1 18.1 199 107-307 4-203 (204)
4 1snn_A DHBP synthase, 3,4-dihy 100.0 5.9E-76 2E-80 562.8 13.7 198 108-308 1-222 (227)
5 1g57_A DHBP synthase, 3,4-dihy 100.0 2E-73 6.9E-78 543.2 18.8 203 108-312 13-215 (217)
6 2bz1_A GTP cyclohydrolase II; 100.0 3E-49 1E-53 372.6 6.9 136 313-449 3-138 (196)
7 1y0n_A Hypothetical UPF0270 pr 46.2 15 0.00052 29.6 3.3 33 109-144 38-70 (78)
8 3n2l_A OPRT, oprtase, orotate 38.7 52 0.0018 31.3 6.3 63 248-310 154-220 (238)
9 3p04_A Uncharacterized BCR; SE 36.5 23 0.00078 28.9 2.9 40 107-160 14-53 (87)
10 3mjd_A Orotate phosphoribosylt 32.7 83 0.0028 29.6 6.6 62 248-309 148-214 (232)
11 1lh0_A OMP synthase; loop clos 28.2 1.2E+02 0.0042 27.6 6.9 63 248-310 129-195 (213)
12 1tif_A IF3-N, translation init 27.7 33 0.0011 27.5 2.4 31 270-300 16-49 (78)
13 3ct4_A PTS-dependent dihydroxy 26.9 25 0.00087 35.3 2.0 69 331-404 37-110 (332)
14 1js3_A DDC;, DOPA decarboxylas 26.1 79 0.0027 31.6 5.5 48 250-297 221-269 (486)
15 2jis_A Cysteine sulfinic acid 24.4 81 0.0028 32.1 5.3 47 251-297 246-293 (515)
16 4e1o_A HDC, histidine decarbox 23.9 85 0.0029 31.7 5.3 48 250-297 227-275 (481)
17 3k40_A Aromatic-L-amino-acid d 23.4 96 0.0033 31.3 5.6 51 247-297 217-268 (475)
18 3vp6_A Glutamate decarboxylase 20.9 1E+02 0.0035 31.5 5.3 48 250-297 234-282 (511)
19 3nmy_A Xometc, cystathionine g 20.3 1.1E+02 0.0036 30.4 5.1 34 264-297 152-186 (400)
20 3ri6_A O-acetylhomoserine sulf 20.1 1E+02 0.0036 30.9 5.1 34 264-297 167-201 (430)
No 1
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=100.00 E-value=3.4e-77 Score=571.80 Aligned_cols=208 Identities=48% Similarity=0.736 Sum_probs=200.8
Q ss_pred CCCcccHHHHHHHHHCCcEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCCcEEeecChhhHhhcCCCcccccCCC
Q 013104 105 TKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDN 184 (449)
Q Consensus 105 ~~~~~~i~~Ai~aLr~G~~Vvv~Dde~rEnEgdLv~aAe~~T~e~vafm~r~~~Glicval~~~~~~rL~Lp~m~~~~~~ 184 (449)
.+.|++|++||++||+|+||||+||++||||||||+|||++||+.||||+||++|+||+||++++|++|+||+|+.. |
T Consensus 9 ~~~~~~ie~Ai~alr~G~~Viv~DdedREnEgDLi~aAe~~T~e~i~fm~r~~~GliC~~lt~e~~~~L~Lp~Mv~~--n 86 (233)
T 1k4i_A 9 KSNFDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTH--N 86 (233)
T ss_dssp ---CCCHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--C
T ss_pred CCchhHHHHHHHHHHCCCeEEEEeCCCCCcceeEEEEhhhCCHHHHHHHHHcCCCCEEEEcCHHHHhhCCCcccccc--c
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999987 8
Q ss_pred CccccCceEEEeecCC-CCCCCCChhhHHHHHHHHhcCCCCCCCcccCCCccccccccCccccccChhHHHHHHHHHcCC
Q 013104 185 EEKLCTAFTVSVDAKY-GTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGL 263 (449)
Q Consensus 185 ~~~~~taftvsVDa~~-g~tTGISA~DRA~TIr~LAd~~s~p~Df~rPGHVfPL~a~~gGvl~R~GhtEAAvdLarlAGl 263 (449)
++.++|+|||||||++ |++|||||+||++||++|++++++|+||+||||||||++++||||+|+|||||||||||||||
T Consensus 87 ~~~~~TaFTVsVda~~~g~tTGISA~DRa~Tir~la~~~~~p~df~rPGHvfPL~A~~GGVl~R~GHTEAaVDLarLAGl 166 (233)
T 1k4i_A 87 ADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGK 166 (233)
T ss_dssp CCSSCCCBBCCEEECSTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTHHHHCCSHHHHHHHHHHHTTC
T ss_pred CCCCCCCeEEEEEcccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCccceeeecCCCeeccCChHHHHHHHHHHcCC
Confidence 8889999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEEeCC-----------CCcccChhHHHHHHhhcCCceecHHHHHHHHHhhhhhhh
Q 013104 264 EPVAVLCEIVDD-----------DGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVE 314 (449)
Q Consensus 264 ~PaaVi~eiv~~-----------dG~ma~~~~l~~fA~~h~L~ivsi~dLi~yr~~~e~lV~ 314 (449)
.|++|||||+++ ||+|||++++.+||++||||+|||+|||+||+++|++|+
T Consensus 167 ~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iitI~dLi~yr~~~e~~v~ 228 (233)
T 1k4i_A 167 RPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKLE 228 (233)
T ss_dssp CSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEEHHHHHHHHHHHHCCC-
T ss_pred CceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcCCeec
Confidence 999999999999 999999999999999999999999999999999998874
No 2
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=100.00 E-value=5e-77 Score=563.44 Aligned_cols=203 Identities=53% Similarity=0.835 Sum_probs=188.7
Q ss_pred CCcccHHHHHHHHHCCcEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCCcEEeecChhhHhhcCCCcccccCCCC
Q 013104 106 KGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNE 185 (449)
Q Consensus 106 ~~~~~i~~Ai~aLr~G~~Vvv~Dde~rEnEgdLv~aAe~~T~e~vafm~r~~~Glicval~~~~~~rL~Lp~m~~~~~~~ 185 (449)
+.|++|++||++||+|+||||+||++||||||||+|||++||+.||||++|++|+||+||++++|++|+||+|+.. |+
T Consensus 2 ~~~~~ie~Ai~~lr~G~~Viv~DdedREnEgDli~aAe~~T~e~i~fm~~~~~GliC~~lt~~~a~~L~Lp~mv~~--n~ 79 (206)
T 3mio_A 2 TRLDSVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAV--NQ 79 (206)
T ss_dssp CCCCCHHHHHHHHHTTCCEEEESSSCTTCCCEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCSCCC------
T ss_pred CCchhHHHHHHHHHCCCeEEEEeCCCCccceeEEEEhHhCCHHHHHHHHHhCCCceEEECCHHHHhhCCCCccccc--CC
Confidence 4688999999999999999999999999999999999999999999999999999999999999999999999986 88
Q ss_pred ccccCceEEEeecCCCCCCCCChhhHHHHHHHHhcCCCCCCCcccCCCccccccccCccccccChhHHHHHHHHHcCCCc
Q 013104 186 EKLCTAFTVSVDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEP 265 (449)
Q Consensus 186 ~~~~taftvsVDa~~g~tTGISA~DRA~TIr~LAd~~s~p~Df~rPGHVfPL~a~~gGvl~R~GhtEAAvdLarlAGl~P 265 (449)
+.++|+|||||||++|++|||||+||++||++|++|.++|+||++|||||||++++|||++|+|||||||||||||||.|
T Consensus 80 ~~~~taftvsvda~~g~tTGISA~DRa~Ti~~ladp~~~p~Df~rPGHvfPL~A~~gGvl~R~GhTEaavdLarlAGl~P 159 (206)
T 3mio_A 80 DKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQP 159 (206)
T ss_dssp -------CCCEEESSSCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTGGGTCCCHHHHHHHHHHHTTSCS
T ss_pred CCCCCCeEEEEecCCCCCCCcCHHHHHHHHHHHhCCCCCHHHhCCCCCceeEeeCCCCcccCCChHHHHHHHHHHcCCCc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEE--eCCCCcccChhHHHHHHhhcCCceecHHHHHHHHHhhh
Q 013104 266 VAVLCEI--VDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRD 310 (449)
Q Consensus 266 aaVi~ei--v~~dG~ma~~~~l~~fA~~h~L~ivsi~dLi~yr~~~e 310 (449)
++||||| +|+||+||+++++.+||++||||+|+|+|||+||+++|
T Consensus 160 a~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~iti~dli~yr~~~e 206 (206)
T 3mio_A 160 AGAICEIVSQKDEGSMAHTDELRVFADEHGLALITIADLIEWRRKHE 206 (206)
T ss_dssp BEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEEHHHHHHHHHHTC
T ss_pred eEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcC
Confidence 9999999 99999999999999999999999999999999998764
No 3
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=100.00 E-value=7.6e-77 Score=561.09 Aligned_cols=199 Identities=51% Similarity=0.819 Sum_probs=190.1
Q ss_pred CcccHHHHHHHHHCCcEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCCcEEeecChhhHhhcCCCcccccCCCCc
Q 013104 107 GFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEE 186 (449)
Q Consensus 107 ~~~~i~~Ai~aLr~G~~Vvv~Dde~rEnEgdLv~aAe~~T~e~vafm~r~~~Glicval~~~~~~rL~Lp~m~~~~~~~~ 186 (449)
.|++|++||++||+|+||||+||++||||||||+|||++||+.||||++|++|+||+||++++|++|+||+|+.. |++
T Consensus 4 ~~~~ie~Ai~~lr~G~~Viv~DdedREnEgDli~aAe~~T~e~i~fm~~~~~GliC~~lt~~~~~~L~Lp~mv~~--n~~ 81 (204)
T 1tks_A 4 IFTPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLAN--RSD 81 (204)
T ss_dssp CSCCHHHHHHHHHTTCCEEEESSSCTTCBCEEEEEGGGCCHHHHHHHHHTBCSCCEEEEEHHHHHHTTCCBSCC------
T ss_pred chhhHHHHHHHHHCCCeEEEEeCCCCCCCEEEEEEhhhCCHHHHHHHHHhCCCcEEEEcCHHHHhhCCCchhccc--cCC
Confidence 378999999999999999999999999999999999999999999999999999999999999999999999986 888
Q ss_pred cccCceEEEeecCCCCCCCCChhhHHHHHHHHhcCCCCCCCcccCCCccccccccCccccccChhHHHHHHHHHcCCCcc
Q 013104 187 KLCTAFTVSVDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPV 266 (449)
Q Consensus 187 ~~~taftvsVDa~~g~tTGISA~DRA~TIr~LAd~~s~p~Df~rPGHVfPL~a~~gGvl~R~GhtEAAvdLarlAGl~Pa 266 (449)
.++|+|||||||++|++|||||+||++||++|++++++|+||++|||||||++++|||++|+|||||||||||||||.|+
T Consensus 82 ~~~taFtVsVda~~g~tTGISA~DRa~Ti~~l~~~~~~p~df~rPGHvfPL~A~~gGvl~R~GHTEAavdLarLAGl~Pa 161 (204)
T 1tks_A 82 RHGTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPA 161 (204)
T ss_dssp --CCCBBCCEEESTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEEECTTGGGTCCCHHHHHHHHHHHTTSCSB
T ss_pred CCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCCcceeeecCCCCccCCCcHHHHHHHHHHcCCCce
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEe-CCCCcccChhHHHHHHhhcCCceecHHHHHHHHH
Q 013104 267 AVLCEIV-DDDGSMARLPKLRQFAQTENLKIISIADLIRYRR 307 (449)
Q Consensus 267 aVi~eiv-~~dG~ma~~~~l~~fA~~h~L~ivsi~dLi~yr~ 307 (449)
+|||||+ ++||+|||++++.+||++||||+|||+|||+||+
T Consensus 162 ~vicEi~~~~dG~mar~~~l~~fA~~h~l~iiti~dLi~yr~ 203 (204)
T 1tks_A 162 GVICELVRDEDGLMMRLDDCIQFGKKHGIKIININQLVEYIS 203 (204)
T ss_dssp EEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEEHHHHHHHHC
T ss_pred EEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHh
Confidence 9999999 8899999999999999999999999999999985
No 4
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=100.00 E-value=5.9e-76 Score=562.75 Aligned_cols=198 Identities=31% Similarity=0.589 Sum_probs=189.2
Q ss_pred cccHHHHHHHHHCCcEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCCcEEeecChhhHhhcCCCcccccCCCCc-
Q 013104 108 FASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEE- 186 (449)
Q Consensus 108 ~~~i~~Ai~aLr~G~~Vvv~Dde~rEnEgdLv~aAe~~T~e~vafm~r~~~Glicval~~~~~~rL~Lp~m~~~~~~~~- 186 (449)
|++|++||++||+|+||||+||+|||||||||+|||++||+.||||+||++|+||+||++++|++|+||+|+.. |++
T Consensus 1 ~~~ie~Ai~alr~G~~Viv~DdedREnEgDli~aAe~~Tpe~i~fm~~~~~GliC~~l~~e~~~~L~Lp~Mv~~--n~~~ 78 (227)
T 1snn_A 1 MNNVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDI--LEFA 78 (227)
T ss_dssp -CHHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHHHHHTCCCHHHH--HHHH
T ss_pred CchHHHHHHHHHCCCeEEEEeCCCCCCceeEEEEhhhCCHHHHHHHHHcCCCcEEEEcCHHHHhhCCChhhhhh--hccc
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999975 331
Q ss_pred ---------------c--ccCceEEEeecCCCCCCCCChhhHHHHHHHHhc------CCCCCCCcccCCCccccccccCc
Q 013104 187 ---------------K--LCTAFTVSVDAKYGTTTGVSANDRAKTVLALAC------RDSKPEDFNRPGHIFPLKYREGG 243 (449)
Q Consensus 187 ---------------~--~~taftvsVDa~~g~tTGISA~DRA~TIr~LAd------~~s~p~Df~rPGHVfPL~a~~gG 243 (449)
. ++|+|||||||+ +++|||||+|||+||++|++ ++++|+||++|||||||++++||
T Consensus 79 ~~~~~~~~~l~~~~~~Y~~~TaFtvsVd~~-~~tTGISA~DRa~Tir~la~~~~~~~~~~~~~df~rPGHVfPL~A~~gG 157 (227)
T 1snn_A 79 SQKFKVLRELYPNDIPYDEKSSFSITINHR-KTFTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGL 157 (227)
T ss_dssp TTTCHHHHHTCCTTCTTSSSCCEEEEEEET-TCSSSCSHHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEEEEECCTTG
T ss_pred cccccccccccccccccCCCCCcEEEEEcC-CCCCCCCHHHHHHHHHHHHhhhcccCCCCCHHHcCCCCCceeEEeCCCC
Confidence 2 789999999998 59999999999999999999 99999999999999999999999
Q ss_pred cccccChhHHHHHHHHHcCCCccEEEEEEeCCCCcccChhHHHHHHhhcCCceecHHHHHHHHHh
Q 013104 244 VLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRK 308 (449)
Q Consensus 244 vl~R~GhtEAAvdLarlAGl~PaaVi~eiv~~dG~ma~~~~l~~fA~~h~L~ivsi~dLi~yr~~ 308 (449)
|++|+|||||||||||||||.|++|||||||+||+|||++++++||++||||+|+|+|||+||++
T Consensus 158 Vl~R~GHTEaaVdLarlAGl~Pa~VicEi~~ddG~mar~~~l~~fA~~h~l~~iti~dLi~yr~~ 222 (227)
T 1snn_A 158 VKNRQGHTEMTVALAELANLVPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINYYLD 222 (227)
T ss_dssp GGTCCSHHHHHHHHHHHTTSCSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEEHHHHHHHC--
T ss_pred EeeCCCchHHHHHHHHHcCCCceEEEEEEeCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999876
No 5
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=100.00 E-value=2e-73 Score=543.16 Aligned_cols=203 Identities=49% Similarity=0.875 Sum_probs=193.7
Q ss_pred cccHHHHHHHHHCCcEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCCcEEeecChhhHhhcCCCcccccCCCCcc
Q 013104 108 FASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEK 187 (449)
Q Consensus 108 ~~~i~~Ai~aLr~G~~Vvv~Dde~rEnEgdLv~aAe~~T~e~vafm~r~~~Glicval~~~~~~rL~Lp~m~~~~~~~~~ 187 (449)
+++|++||++||+|+||||+||++||||||||+|||++||+.||||++|++|+||++|++++|++|+||+|+.. |++.
T Consensus 13 ~~~ie~Ai~~lr~G~~Viv~DdedREnEgdli~aAe~~T~e~i~fm~~~~~GliCl~lt~~ra~~L~Lp~mv~~--n~~~ 90 (217)
T 1g57_A 13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSA 90 (217)
T ss_dssp HHHHHHHHHHHHTTCCEEEEC----CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--CCCT
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCCcCEEEEEEhhhCCHHHHHHHHHhCCCceEEECCHHHHhhCCCcccccc--CCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999986 8888
Q ss_pred ccCceEEEeecCCCCCCCCChhhHHHHHHHHhcCCCCCCCcccCCCccccccccCccccccChhHHHHHHHHHcCCCccE
Q 013104 188 LCTAFTVSVDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVA 267 (449)
Q Consensus 188 ~~taftvsVDa~~g~tTGISA~DRA~TIr~LAd~~s~p~Df~rPGHVfPL~a~~gGvl~R~GhtEAAvdLarlAGl~Paa 267 (449)
++|+|||||||+.|++|||||.||+.||++|++|+++|+||++|||||||++++|||++|+|||||||||||||||.|++
T Consensus 91 ~~taftVsvda~~g~tTGISa~DRa~Ti~~lad~~~~~~Df~~PGHvfPL~A~~gGvl~R~GhTEAavdLarLAGl~Pa~ 170 (217)
T 1g57_A 91 YGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAG 170 (217)
T ss_dssp TCCCBBSCEEESSSCSSSCSHHHHHHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSCE
T ss_pred CCCceEEeeccccCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCCccceeecCCCcccCCCcHHHHHHHHHHcCCCceE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCcccChhHHHHHHhhcCCceecHHHHHHHHHhhhhh
Q 013104 268 VLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRL 312 (449)
Q Consensus 268 Vi~eiv~~dG~ma~~~~l~~fA~~h~L~ivsi~dLi~yr~~~e~l 312 (449)
|||||+++||+|++.+++.+||++|+||+|+|+|||+||+++|+.
T Consensus 171 vicEi~~~dG~mar~~~l~~fA~~h~l~~iti~dLi~yr~~~e~~ 215 (217)
T 1g57_A 171 VLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERK 215 (217)
T ss_dssp EEEEBBCTTSSBCCHHHHHHHHHHTTCEEEEHHHHHHHHHHHC--
T ss_pred EEEEEeCCCCCccCHHHHHHHHHHcCCCEEEHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999999988754
No 6
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=100.00 E-value=3e-49 Score=372.61 Aligned_cols=136 Identities=49% Similarity=0.838 Sum_probs=133.6
Q ss_pred hhhhccCccCCCcccEEEEEEEecCCCceEEEEEecccCCCCceeEEEccCCccccccCCCCCCChHHHHHHHHHHHHcC
Q 013104 313 VELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAG 392 (449)
Q Consensus 313 V~r~~~~~lpT~~G~F~~~~Yr~~~dg~EHlALv~G~i~~~~~vLVRVHSeCltgDvfgs~~CDCg~qL~~Al~~I~~~G 392 (449)
|++++++++||+||+|++++|++..++.||+|||+|++.+++||||||||+|+|||+|||.+|||+|||+.||++|+++|
T Consensus 3 V~~v~~~~lpT~~G~f~~~~y~~~~~~~eH~ALv~G~i~~~~~vLVRvHsec~tgDvfgs~rcdcg~qL~~Al~~I~~~G 82 (196)
T 2bz1_A 3 LKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEG 82 (196)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEETTTCCEEEEEEESCCCSSSCEEEEEEECCHHHHTSCCSSCSHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEecCCCeeEEEEEEEECCCCcEEEEEEeCCCCCCCccEEEEeccCChHHHhCCCCCCChHHHHHHHHHHHHhC
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEeCCCCCCcchhhhhhhhccccCCCCchhhhhhcCCCCCccchhhhhhccC
Q 013104 393 RGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQLKV 449 (449)
Q Consensus 393 ~GVlVYLr~qEgRGiGl~~Klray~Lqd~G~DTveAn~~lg~~~D~RdYgigAQIL~ 449 (449)
+||||||| ||||||||.+|+++|.|||+|+||++||.++|++.|.|+||+|||||+
T Consensus 83 ~GVlvyLr-qegrgigL~~kl~ay~lqd~g~dt~~an~~lg~~~d~R~ygigAqIL~ 138 (196)
T 2bz1_A 83 RGILLYHR-QEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFK 138 (196)
T ss_dssp SEEEEEEC-CHHHHTCHHHHHHHHHHHHTTCCHHHHHHHTTCCSCCCCTHHHHHHHH
T ss_pred CEEEEEEC-CCCcchhHHHHHHHHhhhccCCcccccccccCCCCccccHHHHHHHHH
Confidence 99999998 999999999999999999999999999999999999999999999995
No 7
>1y0n_A Hypothetical UPF0270 protein PA3463; MCSG, midwest center for structural genomics, protein struct initiative, PSI, structural genomics; 2.00A {Pseudomonas aeruginosa} SCOP: d.291.1.1
Probab=46.16 E-value=15 Score=29.57 Aligned_cols=33 Identities=27% Similarity=0.382 Sum_probs=24.2
Q ss_pred ccHHHHHHHHHCCcEEEEEeCCCCCCcccEEEEcCC
Q 013104 109 ASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASL 144 (449)
Q Consensus 109 ~~i~~Ai~aLr~G~~Vvv~Dde~rEnEgdLv~aAe~ 144 (449)
..|++...+|++|+.||++|.. .|.-=|++.+.
T Consensus 38 ~kv~qv~~qL~~GeavIvfse~---~Esv~I~~k~~ 70 (78)
T 1y0n_A 38 VRVERARHALRRGEAVILFDPE---SQQCQLMLRSE 70 (78)
T ss_dssp HHHHHHHHHHHTTSEEEEECTT---TCCEEEEEGGG
T ss_pred HHHHHHHHHHHcCCEEEEECCC---CCeEeeeEHHH
Confidence 4689999999999999999743 34444555443
No 8
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=38.67 E-value=52 Score=31.25 Aligned_cols=63 Identities=21% Similarity=0.347 Sum_probs=43.8
Q ss_pred cChh-HHHHHHHHHcCCCccEEEEEEeCCCCcccChhHHHHHHhhcCCce---ecHHHHHHHHHhhh
Q 013104 248 AGHT-EASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKI---ISIADLIRYRRKRD 310 (449)
Q Consensus 248 ~Ght-EAAvdLarlAGl~PaaVi~eiv~~dG~ma~~~~l~~fA~~h~L~i---vsi~dLi~yr~~~e 310 (449)
.|-| .+++++.+-+|...++++|-+=-.+|.-.......++-+++|+|+ ++++||++|...+.
T Consensus 154 TG~T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~~l~a~~~~~~~~Gv~v~SL~~~~~l~~~~~~~~ 220 (238)
T 3n2l_A 154 AGTAIRESMELIQANKADLAGVLVAIDRQEKGKGELSAIQEVERDFGCAVISIVSLTDLITYLEQQG 220 (238)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEECCCBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHHHSSC
T ss_pred ccHHHHHHHHHHHHcCCEEEEEEEEEEcccCccchhhHHHHHHHHcCCCEEEEEEHHHHHHHHHHcC
Confidence 4444 789999999999888877755333332223455667767889985 46788899887653
No 9
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=36.50 E-value=23 Score=28.93 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=28.4
Q ss_pred CcccHHHHHHHHHCCcEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCCc
Q 013104 107 GFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGI 160 (449)
Q Consensus 107 ~~~~i~~Ai~aLr~G~~Vvv~Dde~rEnEgdLv~aAe~~T~e~vafm~r~~~Gl 160 (449)
.|+..+++.+.||+|++|||- =+ .+.++.-..++-..+|.
T Consensus 14 sy~Da~~I~d~Lr~~~~VvvN-L~-------------~ld~~~AqRivDF~sG~ 53 (87)
T 3p04_A 14 SFEDAQVIGGAFRDGDAVVFD-MS-------------LLSREEARRIVDFAAGL 53 (87)
T ss_dssp SGGGHHHHHHHHHTTCCEEEE-CT-------------TSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEE-CC-------------CCCHHHHHHHHHHhccc
Confidence 678899999999999999983 22 34455555555555554
No 10
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=32.72 E-value=83 Score=29.63 Aligned_cols=62 Identities=13% Similarity=0.260 Sum_probs=41.4
Q ss_pred cChh-HHHHHHHHHcCCCccEEEEEEeCCCCcc-cChhHHHHHHhhcCCcee---cHHHHHHHHHhh
Q 013104 248 AGHT-EASVDLAVLAGLEPVAVLCEIVDDDGSM-ARLPKLRQFAQTENLKII---SIADLIRYRRKR 309 (449)
Q Consensus 248 ~Ght-EAAvdLarlAGl~PaaVi~eiv~~dG~m-a~~~~l~~fA~~h~L~iv---si~dLi~yr~~~ 309 (449)
.|.| .+++++.+-+|..+++++|-+=-.+|.. -..+...++-+++|+|+. +++||+.|....
T Consensus 148 TG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~~~~~~~gv~v~sL~~~~~l~~~~~~~ 214 (232)
T 3mjd_A 148 AGTAFYESYNKLKIINAKIAGVVLSIDRQEKAKDSDISATKKISQDFNIPVLAVTNFESIFEYVKEN 214 (232)
T ss_dssp SSHHHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSSSCHHHHHHHHHCCCEEEEEEHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHCCCEEEEEEEEEECCcCCccccchhHHHHHHHcCCcEEEEEeHHHHHHHHHhh
Confidence 4444 7789999999988888776543222211 123455667778899864 677888887654
No 11
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=28.21 E-value=1.2e+02 Score=27.56 Aligned_cols=63 Identities=19% Similarity=0.365 Sum_probs=42.7
Q ss_pred cChh-HHHHHHHHHcCCCccEEEEEEeCCCCcccChhHHHHHHhhcCCce---ecHHHHHHHHHhhh
Q 013104 248 AGHT-EASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKI---ISIADLIRYRRKRD 310 (449)
Q Consensus 248 ~Ght-EAAvdLarlAGl~PaaVi~eiv~~dG~ma~~~~l~~fA~~h~L~i---vsi~dLi~yr~~~e 310 (449)
.|.| .+++++.+-+|-..+.++|-+--.+|--.+.+.+.++-++.|+|+ ++++||+.|...+.
T Consensus 129 TG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~~g~~~l~~~~~~~~~~g~~v~sl~~~~~l~~~~~~~~ 195 (213)
T 1lh0_A 129 AGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERDYGCKVISIITLKDLIAYLEEKP 195 (213)
T ss_dssp SSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHHHHCG
T ss_pred chHHHHHHHHHHHHCCCeEEEEEEEEEcccCcccchhhHHHHHHHcCCCeEEEEEHHHHHHHHHHcC
Confidence 5555 788999999998877665544323333334566677777789865 56788888886543
No 12
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=27.65 E-value=33 Score=27.54 Aligned_cols=31 Identities=19% Similarity=0.445 Sum_probs=25.1
Q ss_pred EEEeCCCCc---ccChhHHHHHHhhcCCceecHH
Q 013104 270 CEIVDDDGS---MARLPKLRQFAQTENLKIISIA 300 (449)
Q Consensus 270 ~eiv~~dG~---ma~~~~l~~fA~~h~L~ivsi~ 300 (449)
+.+++++|+ .++..++.+.|++.+|-+|-|+
T Consensus 16 Vrli~~~Ge~lGv~~~~eAl~~A~e~~LDLVevs 49 (78)
T 1tif_A 16 VRLIDQNGDQLGIKSKQEALEIAARRNLDLVLVA 49 (78)
T ss_dssp EEEECTTSCEEEEEEHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCCCcCCCcccHHHHHHHHHHcCCCEEEEC
Confidence 567888886 4788899999999999887664
No 13
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=26.86 E-value=25 Score=35.33 Aligned_cols=69 Identities=25% Similarity=0.318 Sum_probs=44.7
Q ss_pred EEEEecCCCceEEEEEecccCCCCceeE-----EEccCCccccccCCCCCCChHHHHHHHHHHHHcCCEEEEEEeCCCC
Q 013104 331 HCYRSLLDGIEHIAMVKGEIGDGQDILV-----RVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEG 404 (449)
Q Consensus 331 ~~Yr~~~dg~EHlALv~G~i~~~~~vLV-----RVHSeCltgDvfgs~~CDCg~qL~~Al~~I~~~G~GVlVYLr~qEg 404 (449)
+.||.... ...++||.|-=+..+|.-. =+=+.+..||||-|.. .+|.-.|++.+. .|.|||+.+.|-.|
T Consensus 37 vv~r~~~~-~~KValISGGGSGHEPahaGfVG~GMLdAAv~G~VFaSPs---~~qi~~aikav~-~g~GvL~ivkNYtG 110 (332)
T 3ct4_A 37 IIQRKSPK-SGKVALVSGGGSGHEPAHAGFVGEGMLSAAVCGAIFTSPT---PDQIYEAIKSAD-EGAGVLLIIKNYLG 110 (332)
T ss_dssp EEEECSCC-CSCCEEEEEEEESSTTTTGGGBSBTSBSEEEEEEETCCCC---HHHHHHHHHHHC-CSSCEEEEEESCHH
T ss_pred EEEeCCCC-CCcEEEEecCCccccccccccccCCccceeeecccCCCCC---HHHHHHHHHhhc-CCCCEEEEeCCcHH
Confidence 44555433 4678999874333344100 0223466799998876 689999998875 56899988876554
No 14
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=26.05 E-value=79 Score=31.62 Aligned_cols=48 Identities=17% Similarity=0.221 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHcCCCccEEEEEEe-CCCCcccChhHHHHHHhhcCCcee
Q 013104 250 HTEASVDLAVLAGLEPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 297 (449)
Q Consensus 250 htEAAvdLarlAGl~PaaVi~eiv-~~dG~ma~~~~l~~fA~~h~L~iv 297 (449)
.-|.+++=..-+|..|.+|++... +..|...+.+++.++|++||+.++
T Consensus 221 ~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lh 269 (486)
T 1js3_A 221 ALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLH 269 (486)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEE
Confidence 346666655567888977777655 567999999999999999999875
No 15
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=24.41 E-value=81 Score=32.05 Aligned_cols=47 Identities=19% Similarity=0.188 Sum_probs=37.2
Q ss_pred hHHHHHHHHHcCCCccEEEEEEe-CCCCcccChhHHHHHHhhcCCcee
Q 013104 251 TEASVDLAVLAGLEPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 297 (449)
Q Consensus 251 tEAAvdLarlAGl~PaaVi~eiv-~~dG~ma~~~~l~~fA~~h~L~iv 297 (449)
-|.+++=.+..|..|.+|++... +..|...+.+++.++|++||+.++
T Consensus 246 L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~ 293 (515)
T 2jis_A 246 LERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLH 293 (515)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEE
Confidence 35555545556888998888776 457999999999999999999876
No 16
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=23.88 E-value=85 Score=31.70 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHcCCCccEEEEEEeC-CCCcccChhHHHHHHhhcCCcee
Q 013104 250 HTEASVDLAVLAGLEPVAVLCEIVD-DDGSMARLPKLRQFAQTENLKII 297 (449)
Q Consensus 250 htEAAvdLarlAGl~PaaVi~eiv~-~dG~ma~~~~l~~fA~~h~L~iv 297 (449)
+-|.+++=.+-.|..|..|++...+ ..|...+.+++.++|++||+.++
T Consensus 227 ~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lh 275 (481)
T 4e1o_A 227 ALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLH 275 (481)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEE
Confidence 4567777667788889888877654 46999999999999999999864
No 17
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=23.43 E-value=96 Score=31.33 Aligned_cols=51 Identities=20% Similarity=0.261 Sum_probs=40.2
Q ss_pred ccChhHHHHHHHHHcCCCccEEEEEEeC-CCCcccChhHHHHHHhhcCCcee
Q 013104 247 RAGHTEASVDLAVLAGLEPVAVLCEIVD-DDGSMARLPKLRQFAQTENLKII 297 (449)
Q Consensus 247 R~GhtEAAvdLarlAGl~PaaVi~eiv~-~dG~ma~~~~l~~fA~~h~L~iv 297 (449)
...+-|.+++=.+-.|..|..|++...+ ..|...+.+++.++|++||+.++
T Consensus 217 d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lh 268 (475)
T 3k40_A 217 RGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIH 268 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEE
Confidence 3445677777667788889887776543 46999999999999999999874
No 18
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=20.95 E-value=1e+02 Score=31.53 Aligned_cols=48 Identities=19% Similarity=0.148 Sum_probs=39.3
Q ss_pred hhHHHHHHHHHcCCCccEEEEEEeC-CCCcccChhHHHHHHhhcCCcee
Q 013104 250 HTEASVDLAVLAGLEPVAVLCEIVD-DDGSMARLPKLRQFAQTENLKII 297 (449)
Q Consensus 250 htEAAvdLarlAGl~PaaVi~eiv~-~dG~ma~~~~l~~fA~~h~L~iv 297 (449)
.-|.+++=.+-.|..|.+|++...+ ..|...+.+++.++|++||+.++
T Consensus 234 ~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lh 282 (511)
T 3vp6_A 234 DFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLH 282 (511)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEE
Confidence 4466776667788889888887664 57999999999999999999875
No 19
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=20.30 E-value=1.1e+02 Score=30.36 Aligned_cols=34 Identities=12% Similarity=0.135 Sum_probs=28.9
Q ss_pred CccEEEEEEe-CCCCcccChhHHHHHHhhcCCcee
Q 013104 264 EPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 297 (449)
Q Consensus 264 ~PaaVi~eiv-~~dG~ma~~~~l~~fA~~h~L~iv 297 (449)
.+.+|++|-. |+.|...+.+++.++|++||+++|
T Consensus 152 ~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~li 186 (400)
T 3nmy_A 152 DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTV 186 (400)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEE
Confidence 5678887765 457999999999999999999887
No 20
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=20.12 E-value=1e+02 Score=30.92 Aligned_cols=34 Identities=12% Similarity=0.271 Sum_probs=28.5
Q ss_pred CccEEEEEEe-CCCCcccChhHHHHHHhhcCCcee
Q 013104 264 EPVAVLCEIV-DDDGSMARLPKLRQFAQTENLKII 297 (449)
Q Consensus 264 ~PaaVi~eiv-~~dG~ma~~~~l~~fA~~h~L~iv 297 (449)
.+.+|++|-. |+.|...+.+++.++|++||+++|
T Consensus 167 ~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~li 201 (430)
T 3ri6_A 167 TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLV 201 (430)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEE
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 5677777754 557999999999999999999887
Done!