BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013105
(449 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 175/301 (58%), Gaps = 15/301 (4%)
Query: 65 NLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ 124
L F+L+ELQ+ + NFS + LG GGFGKVYKG + D VAVK L Q
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-------GTLVAVKRLKEERXQ 76
Query: 125 GHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP- 182
G ++ EV + H +L+ L G+C RLLVY YMA G++ L + S P
Sbjct: 77 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL 136
Query: 183 -WLTRIKIAIGAARCLAFLHGEEKP-VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGE 240
W R +IA+G+AR LA+LH P +I+RD KA+NILLD ++ A + DFGLA +
Sbjct: 137 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYK 195
Query: 241 DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKD-- 298
D H+ V GT G+ APEY++TG + DVF +GV+LLEL+TG+R+ + R + D
Sbjct: 196 DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 255
Query: 299 LVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
L++W + +LK+ KL+ ++D L+ Y E ++L VA C +P RP M+ VV+ L
Sbjct: 256 LLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
Query: 359 E 359
E
Sbjct: 315 E 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 174/301 (57%), Gaps = 15/301 (4%)
Query: 65 NLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ 124
L F+L+ELQ+ + NF + LG GGFGKVYKG + D VAVK L +Q
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-------GXLVAVKRLKEERTQ 68
Query: 125 GHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP- 182
G ++ EV + H +L+ L G+C RLLVY YMA G++ L + S P
Sbjct: 69 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL 128
Query: 183 -WLTRIKIAIGAARCLAFLHGEEKP-VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGE 240
W R +IA+G+AR LA+LH P +I+RD KA+NILLD ++ A + DFGLA +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYK 187
Query: 241 DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKD-- 298
D H+ V G G+ APEY++TG + DVF +GV+LLEL+TG+R+ + R + D
Sbjct: 188 DXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 299 LVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
L++W + +LK+ KL+ ++D L+ Y E ++L VA C +P RP M+ VV+ L
Sbjct: 248 LLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
Query: 359 E 359
E
Sbjct: 307 E 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 175/314 (55%), Gaps = 18/314 (5%)
Query: 58 SSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV 117
SS LV + L +L+ T+NF +G G FGKVYKG + D + LK +T
Sbjct: 18 SSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTP---- 73
Query: 118 LDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNY 177
SQG E+ E+ L +HPHLV+LIG+C E +L+Y+YM GNL L Y
Sbjct: 74 ---ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL---Y 127
Query: 178 SSTLP-----WLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGL 232
S LP W R++I IGAAR L +LH + +I+RD K+ NILLD ++ K++DFG+
Sbjct: 128 GSDLPTMSMSWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGI 185
Query: 233 ATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR 292
+ G + + +H+ V GT GY PEY G LT DV+SFGVVL E+L R ++ ++
Sbjct: 186 SKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245
Query: 293 CKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMT 352
+ +L EWA + +L+QI+D L D+ E ++ A +CL+ + + RP+M
Sbjct: 246 PREMVNLAEWAVESHNN-GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMG 304
Query: 353 TVVKALEPLLDLND 366
V+ LE L L +
Sbjct: 305 DVLWKLEYALRLQE 318
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 174/314 (55%), Gaps = 18/314 (5%)
Query: 58 SSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV 117
SS LV + L +L+ T+NF +G G FGKVYKG + D + LK +T
Sbjct: 18 SSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTP---- 73
Query: 118 LDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNY 177
SQG E+ E+ L +HPHLV+LIG+C E +L+Y+YM GNL L Y
Sbjct: 74 ---ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL---Y 127
Query: 178 SSTLP-----WLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGL 232
S LP W R++I IGAAR L +LH + +I+RD K+ NILLD ++ K++DFG+
Sbjct: 128 GSDLPTMSMSWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGI 185
Query: 233 ATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR 292
+ G + +H+ V GT GY PEY G LT DV+SFGVVL E+L R ++ ++
Sbjct: 186 SKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245
Query: 293 CKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMT 352
+ +L EWA + +L+QI+D L D+ E ++ A +CL+ + + RP+M
Sbjct: 246 PREMVNLAEWAVESHNN-GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMG 304
Query: 353 TVVKALEPLLDLND 366
V+ LE L L +
Sbjct: 305 DVLWKLEYALRLQE 318
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 172/309 (55%), Gaps = 25/309 (8%)
Query: 64 SNLHVFTLKELQMITHNFSR------SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVK- 116
+ H F+ EL+ +T+NF + +GEGGFG VYKG V++ TVAVK
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--------TVAVKK 61
Query: 117 ---VLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL 173
++D+ + +++ E+ + + +H +LV L+G+ + + LVY YM G+L D+L
Sbjct: 62 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
Query: 174 F-KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGL 232
+ + L W R KIA GAA + FLH E I+RD K++NILLD + AK+SDFGL
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGL 179
Query: 233 ATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR 292
A + + + + ++GT Y APE + G +T D++SFGVVLLE++TG +V+++R
Sbjct: 180 ARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 293 CKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMT 352
+ L++ + + ++ ID ++ D ST + + +VA QCL RP +
Sbjct: 239 --EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIK 295
Query: 353 TVVKALEPL 361
V + L+ +
Sbjct: 296 KVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 171/309 (55%), Gaps = 25/309 (8%)
Query: 64 SNLHVFTLKELQMITHNFSR------SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVK- 116
+ H F+ EL+ +T+NF + +GEGGFG VYKG V++ TVAVK
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--------TVAVKK 61
Query: 117 ---VLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL 173
++D+ + +++ E+ + + +H +LV L+G+ + + LVY YM G+L D+L
Sbjct: 62 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
Query: 174 F-KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGL 232
+ + L W R KIA GAA + FLH E I+RD K++NILLD + AK+SDFGL
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGL 179
Query: 233 ATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR 292
A + + + ++GT Y APE + G +T D++SFGVVLLE++TG +V+++R
Sbjct: 180 ARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 293 CKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMT 352
+ L++ + + ++ ID ++ D ST + + +VA QCL RP +
Sbjct: 239 --EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIK 295
Query: 353 TVVKALEPL 361
V + L+ +
Sbjct: 296 KVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 170/309 (55%), Gaps = 25/309 (8%)
Query: 64 SNLHVFTLKELQMITHNFSR------SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVK- 116
+ H F+ EL+ +T+NF + +GEGGFG VYKG V++ TVAVK
Sbjct: 4 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--------TVAVKK 55
Query: 117 ---VLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL 173
++D+ + +++ E+ + + +H +LV L+G+ + + LVY YM G+L D+L
Sbjct: 56 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 115
Query: 174 F-KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGL 232
+ + L W R KIA GAA + FLH E I+RD K++NILLD + AK+SDFGL
Sbjct: 116 SCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGL 173
Query: 233 ATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR 292
A + + ++GT Y APE + G +T D++SFGVVLLE++TG +V+++R
Sbjct: 174 ARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 232
Query: 293 CKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMT 352
+ L++ + + ++ ID ++ D ST + + +VA QCL RP +
Sbjct: 233 --EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIK 289
Query: 353 TVVKALEPL 361
V + L+ +
Sbjct: 290 KVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 164/307 (53%), Gaps = 25/307 (8%)
Query: 64 SNLHVFTLKELQMITHNFSR------SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVK- 116
+ H F+ EL+ +T+NF + GEGGFG VYKG V++ TVAVK
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT--------TVAVKK 52
Query: 117 ---VLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL 173
++D+ + +++ E+ + +H +LV L+G+ + + LVY Y G+L D+L
Sbjct: 53 LAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL 112
Query: 174 F-KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGL 232
+ + L W R KIA GAA + FLH E I+RD K++NILLD + AK+SDFGL
Sbjct: 113 SCLDGTPPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGL 170
Query: 233 ATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR 292
A + + ++GT Y APE + G +T D++SFGVVLLE++TG +V+++R
Sbjct: 171 ARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
Query: 293 CKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMT 352
+ L++ + + ++ ID + D ST + +VA QCL RP +
Sbjct: 230 --EPQLLLDIKEEIEDEEKTIEDYIDKKXNDADST-SVEAXYSVASQCLHEKKNKRPDIK 286
Query: 353 TVVKALE 359
V + L+
Sbjct: 287 KVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 29/279 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR--EWLAEVIFLGQLKHPHL 144
+G G FG V+ R VAVK+L R E+L EV + +L+HP++
Sbjct: 45 IGAGSFGTVH--------RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS-STLPWLTRIKIAIGAARCLAFLHGE 203
V +G + + +V EY++ G+L+ L K+ + L R+ +A A+ + +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTG 263
P+++RD K+ N+L+D Y K+ DFGL+ + + GT + APE +
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
DV+SFGV+L EL T ++ W RLE
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQP--------------WGNLNPAQVVAAVGFKCKRLE- 259
Query: 324 RYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
++AA+ C ++ P RP+ T++ L PL+
Sbjct: 260 -IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 29/279 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR--EWLAEVIFLGQLKHPHL 144
+G G FG V+ R VAVK+L R E+L EV + +L+HP++
Sbjct: 45 IGAGSFGTVH--------RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS-STLPWLTRIKIAIGAARCLAFLHGE 203
V +G + + +V EY++ G+L+ L K+ + L R+ +A A+ + +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTG 263
P+++R+ K+ N+L+D Y K+ DFGL+ + + GT + APE +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
DV+SFGV+L EL T ++ W RLE
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQP--------------WGNLNPAQVVAAVGFKCKRLEI 260
Query: 324 RYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
+ ++AA+ C ++ P RP+ T++ L PL+
Sbjct: 261 PRNLN--PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 44/290 (15%)
Query: 87 LGEGGFGKVYKG-CVDDNLRPGLKAQTVAVKVLDVNGSQGH-------REWLAEVIFLGQ 138
+G+GGFG V+KG V D VA+K L + S+G +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRLVKDK-------SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
L HP++V L G +V E++ G+L+ +L + + + W ++++ + A +
Sbjct: 80 LNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIE 136
Query: 199 FLHGEEKPVIYRDFKASNILLDS-DYN----AKLSDFGLATDGPQGEDSHITTCVMGTEG 253
++ + P+++RD ++ NI L S D N AK++DFGL+ + H + ++G
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQ 191
Query: 254 YAAPEYINTGH--LTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFT 311
+ APE I T D +SF ++L +LTG E E++ +K
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTG-----------EGPFDEYSYGKIK--- 237
Query: 312 KLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
++ I + L + RL V C S +PK RP + +VK L L
Sbjct: 238 FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 44/290 (15%)
Query: 87 LGEGGFGKVYKG-CVDDNLRPGLKAQTVAVKVLDVNGSQGH-------REWLAEVIFLGQ 138
+G+GGFG V+KG V D VA+K L + S+G +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRLVKDK-------SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
L HP++V L G +V E++ G+L+ +L + + + W ++++ + A +
Sbjct: 80 LNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIE 136
Query: 199 FLHGEEKPVIYRDFKASNILLDS-DYN----AKLSDFGLATDGPQGEDSHITTCVMGTEG 253
++ + P+++RD ++ NI L S D N AK++DFG + + H + ++G
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQ 191
Query: 254 YAAPEYINTGH--LTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFT 311
+ APE I T D +SF ++L +LTG E E++ +K
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTG-----------EGPFDEYSYGKIK--- 237
Query: 312 KLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
++ I + L + RL V C S +PK RP + +VK L L
Sbjct: 238 FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 44/290 (15%)
Query: 87 LGEGGFGKVYKG-CVDDNLRPGLKAQTVAVKVLDVNGSQGH-------REWLAEVIFLGQ 138
+G+GGFG V+KG V D VA+K L + S+G +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRLVKDK-------SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
L HP++V L G +V E++ G+L+ +L + + + W ++++ + A +
Sbjct: 80 LNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIE 136
Query: 199 FLHGEEKPVIYRDFKASNILLDS-DYN----AKLSDFGLATDGPQGEDSHITTCVMGTEG 253
++ + P+++RD ++ NI L S D N AK++DF L+ + H + ++G
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQ 191
Query: 254 YAAPEYINTGH--LTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFT 311
+ APE I T D +SF ++L +LTG E E++ +K
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTG-----------EGPFDEYSYGKIK--- 237
Query: 312 KLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
++ I + L + RL V C S +PK RP + +VK L L
Sbjct: 238 FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
LGEG FGKV C D + VAVK L + HR W E+ L L H H++
Sbjct: 39 LGEGHFGKVSLYCYDPT--NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 146 NLIGYCCEDEHRL---LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
G CCED LV EY+ LG+L D L +S L L + A +A+LH
Sbjct: 97 KYKG-CCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQL--LLFAQQICEGMAYLHA 152
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH-ITTCVMGTEGYAAPEYIN 261
+ I+RD A N+LLD+D K+ DFGLA P+G + + + + APE +
Sbjct: 153 QH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 262 TGHLTTMCDVFSFGVVLLELLT 283
DV+SFGV L ELLT
Sbjct: 211 EYKFYYASDVWSFGVTLYELLT 232
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 61/333 (18%)
Query: 65 NLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ 124
+LH+ KE+++ + +G G FG V K +A+ VA+K ++ +
Sbjct: 2 SLHMIDYKEIEV-------EEVVGRGAFGVVCKA--------KWRAKDVAIKQIESESER 46
Query: 125 GHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
+ ++ E+ L ++ HP++V L G C LV EY G+L++ L + + LP+
Sbjct: 47 --KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVL--HGAEPLPYY 100
Query: 185 TRIKIAIGAARC---LAFLHG-EEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQG 239
T +C +A+LH + K +I+RD K N+LL + K+ DFG A D
Sbjct: 101 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD---- 156
Query: 240 EDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDL 299
+H+T G+ + APE + + CDVFS+G++L E++T R+ ++ +
Sbjct: 157 IQTHMTN-NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-- 213
Query: 300 VEWA------RPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTT 353
+ WA P++K+ K + + +R C S +P RP+M
Sbjct: 214 IMWAVHNGTRPPLIKNLPKPIESLMTR-------------------CWSKDPSQRPSMEE 254
Query: 354 VVKALEPLLDLNDIPIGPFVYTV---VPPGDHG 383
+VK + L+ P Y +PPG+ G
Sbjct: 255 IVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDG 287
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 61/333 (18%)
Query: 65 NLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ 124
+LH+ KE+++ + +G G FG V K +A+ VA+K ++ +
Sbjct: 1 SLHMIDYKEIEV-------EEVVGRGAFGVVCKA--------KWRAKDVAIKQIESESER 45
Query: 125 GHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
+ ++ E+ L ++ HP++V L G C LV EY G+L++ L + + LP+
Sbjct: 46 --KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVL--HGAEPLPYY 99
Query: 185 TRIKIAIGAARC---LAFLHG-EEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQG 239
T +C +A+LH + K +I+RD K N+LL + K+ DFG A D
Sbjct: 100 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD---- 155
Query: 240 EDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDL 299
+H+T G+ + APE + + CDVFS+G++L E++T R+ ++ +
Sbjct: 156 IQTHMTN-NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-- 212
Query: 300 VEWA------RPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTT 353
+ WA P++K+ K + + +R C S +P RP+M
Sbjct: 213 IMWAVHNGTRPPLIKNLPKPIESLMTR-------------------CWSKDPSQRPSMEE 253
Query: 354 VVKALEPLLDLNDIPIGPFVYTV---VPPGDHG 383
+VK + L+ P Y +PPG+ G
Sbjct: 254 IVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDG 286
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 85 DYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHL 144
+ LG+G FG+ K + + + +K L + R +L EV + L+HP++
Sbjct: 16 EVLGKGCFGQAIKVTHRET------GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ IG +D+ + EY+ G L + K+ S PW R+ A A +A+LH
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLA------TDGPQG------EDSHITTCVMGTE 252
+I+RD + N L+ + N ++DFGLA P+G D V+G
Sbjct: 129 --IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE IN DVFSFG+VL E++ GR + + + R D R L
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLNVRGFL----- 240
Query: 313 LDQIIDSRLEDRYSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPL-LDL-NDIPI 369
DRY + +C +P+ RP+ + LE L + L +P+
Sbjct: 241 ----------DRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPL 290
Query: 370 GP 371
GP
Sbjct: 291 GP 292
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
LGEG FGKV C D + VAVK L + HR W E+ L L H H++
Sbjct: 22 LGEGHFGKVSLYCYDPT--NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 146 NLIGYCCEDEHR---LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
G CCED+ LV EY+ LG+L D L +S L L + A +A+LH
Sbjct: 80 KYKG-CCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQL--LLFAQQICEGMAYLHA 135
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH-ITTCVMGTEGYAAPEYIN 261
+ I+R+ A N+LLD+D K+ DFGLA P+G + + + + APE +
Sbjct: 136 QH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 262 TGHLTTMCDVFSFGVVLLELLT 283
DV+SFGV L ELLT
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
LGEG FGKV C D + VAVK L + HR W E+ L L H H++
Sbjct: 22 LGEGHFGKVSLYCYDPT--NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 146 NLIGYCCEDEHR---LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
G CCED+ LV EY+ LG+L D L +S L L + A +A+LH
Sbjct: 80 KYKG-CCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQL--LLFAQQICEGMAYLHS 135
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH-ITTCVMGTEGYAAPEYIN 261
+ I+R+ A N+LLD+D K+ DFGLA P+G + + + + APE +
Sbjct: 136 QH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 262 TGHLTTMCDVFSFGVVLLELLT 283
DV+SFGV L ELLT
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 28/301 (9%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR 127
VF E ++ + LG+G FG VY+G D ++ G VAVK ++ + S R
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 64
Query: 128 -EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF-------KNYSS 179
E+L E + H+V L+G + + L+V E MA G+L L N
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 180 TLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQ 238
P L I++A A +A+L+ K ++RD A N ++ D+ K+ DFG+ D +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 239 GEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKD 298
+ + + APE + G TT D++SFGVVL E+ +
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------------- 227
Query: 299 LVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
L E L + L ++D D+ +R+ + C NPK RPT +V L
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 359 E 359
+
Sbjct: 287 K 287
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 28/301 (9%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR 127
VF E ++ + LG+G FG VY+G D ++ G VAVK ++ + S R
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 61
Query: 128 -EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF-------KNYSS 179
E+L E + H+V L+G + + L+V E MA G+L L N
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 180 TLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQ 238
P L I++A A +A+L+ K ++RD A N ++ D+ K+ DFG+ D +
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 239 GEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKD 298
+ + + APE + G TT D++SFGVVL E+ +
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------------- 224
Query: 299 LVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
L E L + L ++D D+ +R+ + C NPK RPT +V L
Sbjct: 225 LAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
Query: 359 E 359
+
Sbjct: 284 K 284
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 82 SRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLK 140
+R +G G FG+VYKG + + G K VA+K L ++ R ++L E +GQ
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTS--SGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
H +++ L G + + +++ EYM G L D+ + L + + G A + +L
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAAP 257
++RD A NIL++S+ K+SDFGL+ D P E ++ T+ + AP
Sbjct: 164 ANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP--EATYTTSGGKIPIRWTAP 219
Query: 258 EYINTGHLTTMCDVFSFGVVLLELLT 283
E I+ T+ DV+SFG+V+ E++T
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 28/301 (9%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR 127
VF E ++ + LG+G FG VY+G D ++ G VAVK ++ + S R
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 64
Query: 128 -EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF-------KNYSS 179
E+L E + H+V L+G + + L+V E MA G+L L N
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 180 TLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQ 238
P L I++A A +A+L+ K ++RD A N ++ D+ K+ DFG+ D +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 239 GEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKD 298
+ + + APE + G TT D++SFGVVL E+ +
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------------- 227
Query: 299 LVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
L E L + L ++D D+ +R+ + C NPK RPT +V L
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 359 E 359
+
Sbjct: 287 K 287
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 35 VHEFA-KELD--ATNISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 88
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V EYM G+L D + + + +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI 147
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGLA D P E
Sbjct: 148 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDP--EA 203
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 80
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 141 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 188
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 189 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 248
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 249 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 282
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 32 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA AR + +LH
Sbjct: 83 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHA-- 138
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT+ + SH + G+ + APE I +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ + DV++FG+VL EL+TG+ N R++ + R L D +K+ R
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 257
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP+ ++ +E L
Sbjct: 258 M---------KRLMA---ECLKKKRDERPSFPRILAEIEEL 286
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 71
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 72 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 131
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 132 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 179
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 180 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 239
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 240 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 273
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 23 VHEFA-KELD--ATNISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 76
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V EYM G+L D + + + +
Sbjct: 77 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI 135
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 136 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 191
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 192 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 130/301 (43%), Gaps = 28/301 (9%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR 127
VF E ++ + LG+G FG VY+G D ++ G VAVK ++ + S R
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRER 64
Query: 128 -EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF-------KNYSS 179
E+L E + H+V L+G + + L+V E MA G+L L N
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 180 TLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQ 238
P L I++A A +A+L+ K ++RD A N ++ D+ K+ DFG+ D +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 239 GEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKD 298
+ + APE + G TT D++SFGVVL E+ +
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------------- 227
Query: 299 LVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
L E L + L ++D D+ +R+ + C NPK RPT +V L
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 359 E 359
+
Sbjct: 287 K 287
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 120 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 167
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 168 RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 228 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPXLREVLE 261
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 35 VHEFA-KELD--ATNISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 88
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V EYM G+L D + + + +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI 147
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 148 QLVGMLRGIASGMKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 203
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 6 VHEFA-KELD--ATNISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 59
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V EYM G+L D + + + +
Sbjct: 60 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI 118
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 119 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 174
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 175 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 33 VHEFA-KELD--ATNISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 86
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V EYM G+L D + + + +
Sbjct: 87 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI 145
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 146 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 201
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 202 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 88
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V EYM G+L D + + + +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI 147
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 148 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 203
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 88
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V EYM G+L D + + + +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI 147
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 148 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 203
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 124/282 (43%), Gaps = 28/282 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHLV 145
LG+G FG VY+G D ++ G VAVK ++ + S R E+L E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLF-------KNYSSTLPWLTR-IKIAIGAARCL 197
L+G + + L+V E MA G+L L N P L I++A A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
A+L+ K ++RD A N ++ D+ K+ DFG+ D + + + + AP
Sbjct: 144 AYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 258 EYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII 317
E + G TT D++SFGVVL E+ + L E L + L ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFVM 246
Query: 318 DSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
D D+ +R+ + C NP RPT +V L+
Sbjct: 247 DGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 57
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 118 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 165
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 120 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 167
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 228 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 261
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 88
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V EYM G+L D + + + +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI 147
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 148 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 203
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 119/241 (49%), Gaps = 15/241 (6%)
Query: 48 PGSP-ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRP 106
PG+ I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN
Sbjct: 2 PGTVHIDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--D 55
Query: 107 GLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYM 164
G K AVK L+ G ++L E I + HP++++L+G C E L+V YM
Sbjct: 56 GKKIHC-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 165 ALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYN 224
G+L + +N + I + A+ + FL K ++RD A N +LD +
Sbjct: 115 KHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFT 171
Query: 225 AKLSDFGLATDGPQGE-DS-HITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELL 282
K++DFGLA D E DS H T + A E + T TT DV+SFGV+L EL+
Sbjct: 172 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 283 T 283
T
Sbjct: 232 T 232
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 35 VHEFA-KELD--ATNISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 88
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V EYM G+L D + + + +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI 147
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 148 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 203
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 125/282 (44%), Gaps = 28/282 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHLV 145
LG+G FG VY+G D ++ G VAVK ++ + S R E+L E + H+V
Sbjct: 24 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLF-------KNYSSTLPWLTR-IKIAIGAARCL 197
L+G + + L+V E MA G+L L N P L I++A A +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
A+L+ K ++RD A N ++ D+ K+ DFG+ D + + + + AP
Sbjct: 143 AYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 258 EYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII 317
E + G TT D++SFGVVL E+ + L E L + L ++
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFVM 245
Query: 318 DSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
D D+ +R+ + C NPK RPT +V L+
Sbjct: 246 DGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 116/236 (49%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 5 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 58
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 59 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 117
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + FL K ++RD A N +LD + K++D
Sbjct: 118 RN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 230 FGLATDGPQGE-DS-HITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E DS H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 175 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 116/236 (49%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 7 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 60
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 61 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + FL K ++RD A N +LD + K++D
Sbjct: 120 RN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 230 FGLATDGPQGE-DS-HITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E DS H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 57
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 118 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 165
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 121/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R + +A+KVL + + +
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLA------REKQRKFILALKVLFKAQLEKAGVEHQLRR 54
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 114
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P S T
Sbjct: 115 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTT 162
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 222
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 223 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 253
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 116/236 (49%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 66 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 119
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 120 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 178
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + FL K ++RD A N +LD + K++D
Sbjct: 179 RN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVAD 235
Query: 230 FGLATDGPQGE-DS-HITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E DS H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 236 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 32 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + +V ++ +L+ L + + I IA AR + +LH
Sbjct: 83 LLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHA-- 138
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT+ + SH + G+ + APE I +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ + DV++FG+VL EL+TG+ N R++ + R L D +K+ R
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 257
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP+ ++ +E L
Sbjct: 258 M---------KRLMA---ECLKKKRDERPSFPRILAEIEEL 286
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 116/236 (49%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 12 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 65
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 66 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 124
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + FL K ++RD A N +LD + K++D
Sbjct: 125 RN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVAD 181
Query: 230 FGLATDGPQGE-DS-HITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E DS H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 182 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 35 VHEFA-KELD--ATNISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 88
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V EYM G+L D + + + +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI 147
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL D P E
Sbjct: 148 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP--EA 203
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 116/236 (49%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 8 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 61
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 62 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 120
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + FL K ++RD A N +LD + K++D
Sbjct: 121 RN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 230 FGLATDGPQGE-DS-HITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E DS H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 178 FGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 55
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 116 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAP----SSR 163
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 164 RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 224 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 257
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 51/301 (16%)
Query: 84 SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL-KHP 142
D +GEG FG+V K + + GL+ ++ + HR++ E+ L +L HP
Sbjct: 20 QDVIGEGNFGQVLKARIK---KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 76
Query: 143 HLVNLIGYCCEDEHRLLVY---EYMALGNLHDQLFKNY--------------SSTLPWLT 185
+++NL+G C EHR +Y EY GNL D L K+ +STL
Sbjct: 77 NIINLLGAC---EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 186 RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ A AR + +L +K I+RD A NIL+ +Y AK++DFGL+ +G++ ++
Sbjct: 134 LLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVYVK 187
Query: 246 TCVMGT--EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVEW 302
MG + A E +N TT DV+S+GV+L E+++ G C + +
Sbjct: 188 K-TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 246
Query: 303 ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
+ K D++ D + QC P RP+ ++ +L +L
Sbjct: 247 GYRLEKPLNCDDEVYD-----------------LMRQCWREKPYERPSFAQILVSLNRML 289
Query: 363 D 363
+
Sbjct: 290 E 290
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 116/236 (49%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 8 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 61
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 62 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 120
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + FL K ++RD A N +LD + K++D
Sbjct: 121 RN-FIRNETHNPTVKDLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 230 FGLATDGPQGE-DS-HITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E DS H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 178 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 51/301 (16%)
Query: 84 SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL-KHP 142
D +GEG FG+V K + + GL+ ++ + HR++ E+ L +L HP
Sbjct: 30 QDVIGEGNFGQVLKARIK---KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 86
Query: 143 HLVNLIGYCCEDEHRLLVY---EYMALGNLHDQLFKNY--------------SSTLPWLT 185
+++NL+G C EHR +Y EY GNL D L K+ +STL
Sbjct: 87 NIINLLGAC---EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 186 RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ A AR + +L +K I+RD A NIL+ +Y AK++DFGL+ +G++ ++
Sbjct: 144 LLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVYVK 197
Query: 246 TCVMGT--EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVEW 302
MG + A E +N TT DV+S+GV+L E+++ G C + +
Sbjct: 198 K-TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 256
Query: 303 ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
+ K D++ D + QC P RP+ ++ +L +L
Sbjct: 257 GYRLEKPLNCDDEVYD-----------------LMRQCWREKPYERPSFAQILVSLNRML 299
Query: 363 D 363
+
Sbjct: 300 E 300
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 28/309 (9%)
Query: 64 SNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS 123
S V+ E ++ + S LG+G FG VY+G ++ + + VA+K ++ S
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 62
Query: 124 QGHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHD-------QLFK 175
R E+L E + + H+V L+G + + L++ E M G+L ++
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 176 NYSSTLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
N P L++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCK 294
D + + + + +PE + G TT DV+SFGVVL E+ T
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 229
Query: 295 REKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTV 354
L E L + L +++ L D+ L + C +NPK RP+ +
Sbjct: 230 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 284
Query: 355 VKALEPLLD 363
+ +++ ++
Sbjct: 285 ISSIKEEME 293
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 120 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 167
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 168 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 228 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 55
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 116 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 163
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 224 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 257
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL----DVNGSQGHREW 129
L++ + + +G GGFGKVY R VAVK D + SQ
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVY--------RAFWIGDEVAVKAARHDPDEDISQTIENV 53
Query: 130 LAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
E LKHP+++ L G C ++ + LV E+ G L+ L +P +
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNW 110
Query: 190 AIGAARCLAFLHGEE-KPVIYRDFKASNILLD--------SDYNAKLSDFGLATDGPQGE 240
A+ AR + +LH E P+I+RD K+SNIL+ S+ K++DFGLA
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA------R 164
Query: 241 DSHITTCVMGTEGYA--APEYINTGHLTTMCDVFSFGVVLLELLTGR---RSVEKNRCKR 295
+ H TT + YA APE I + DV+S+GV+L ELLTG R ++
Sbjct: 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY 224
Query: 296 EKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVV 355
+ + A P+ + + A + C + +P SRP+ T ++
Sbjct: 225 GVAMNKLALPI-------------------PSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
Query: 356 KAL 358
L
Sbjct: 266 DQL 268
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P S T
Sbjct: 118 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTT 165
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 54
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 55 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 115 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 162
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 223 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 256
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ + K VAVK + GS +LAE + L+H LV
Sbjct: 23 LGAGQFGEVWMATYN-------KHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ E+MA G+L D L + S P I + A +AF+ E++
Sbjct: 75 LHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI--EQRN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLAR---VIEDNEYT----AREGAKFPIKWTAPEAI 184
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L+E++T R
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 46/291 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 23 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 75
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 133
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLAT-------DGPQGEDSHITTCVMGTEGYAAPEY 259
I+RD A N L+ ++ K++DFGL+ P G I + APE
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--------WTAPES 185
Query: 260 INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII-- 317
+ + DV++FGV+L E+ T S P + D +++ +++
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEK 229
Query: 318 DSRLEDRYSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
D R+E EG +++ + C NP RP+ + +A E + + I
Sbjct: 230 DYRME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 46/291 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 22 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 74
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 75 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 132
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLAT-------DGPQGEDSHITTCVMGTEGYAAPEY 259
I+RD A N L+ ++ K++DFGL+ P G I + APE
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--------WTAPES 184
Query: 260 INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII-- 317
+ + DV++FGV+L E+ T S P + D +++ +++
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEK 228
Query: 318 DSRLEDRYSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
D R+E EG +++ + C NP RP+ + +A E + + I
Sbjct: 229 DYRME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN-GSQGHREWLAEVIFLGQLKHPHLV 145
LGEG FGKV C D + VAVK L G Q W E+ L L H H+V
Sbjct: 17 LGEGHFGKVSLYCYDPT--NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 146 NLIGYCCEDEHR---LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
G CCED+ LV EY+ LG+L D L ++ L A +A+LH
Sbjct: 75 KYKG-CCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL---FAQQICEGMAYLHA 130
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH-ITTCVMGTEGYAAPEYIN 261
+ I+R A N+LLD+D K+ DFGLA P+G + + + + APE +
Sbjct: 131 QH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 262 TGHLTTMCDVFSFGVVLLELLT 283
DV+SFGV L ELLT
Sbjct: 189 ECKFYYASDVWSFGVTLYELLT 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 121/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 55
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P
Sbjct: 116 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD-- 165
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T C GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 TLC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 224 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 257
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 29 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 81 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 137
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXT----AREGAKFPIKWTAPEAI 190
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 191 NYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN-GSQGHREWLAEVIFLGQLKHPHLV 145
LGEG FGKV C D + VAVK L G Q W E+ L L H H+V
Sbjct: 16 LGEGHFGKVSLYCYDPT--NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 146 NLIGYCCEDEHR---LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
G CCED+ LV EY+ LG+L D L ++ L A +A+LH
Sbjct: 74 KYKG-CCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL---FAQQICEGMAYLHA 129
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH-ITTCVMGTEGYAAPEYIN 261
+ I+R A N+LLD+D K+ DFGLA P+G + + + + APE +
Sbjct: 130 QH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 262 TGHLTTMCDVFSFGVVLLELLT 283
DV+SFGV L ELLT
Sbjct: 188 ECKFYYASDVWSFGVTLYELLT 209
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 27 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 79 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 135
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXT----AREGAKFPIKWTAPEAI 188
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRR 56
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 116
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P S T
Sbjct: 117 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTT 164
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 224
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 225 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRR 61
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 121
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P S T
Sbjct: 122 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTT 169
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 229
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 230 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 260
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 43 TDVSNP----GSPISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKG 98
+D+S+P I L+ L+ LV + HV + +I H ++ +G G FG VY G
Sbjct: 12 SDISSPLLQNTVHIDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHG 67
Query: 99 CVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR 157
+ DN G K AVK L+ G ++L E I + HP++++L+G C E
Sbjct: 68 TLLDN--DGKKIHC-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 124
Query: 158 -LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASN 216
L+V YM G+L + +N + I + A+ + +L K ++RD A N
Sbjct: 125 PLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARN 181
Query: 217 ILLDSDYNAKLSDFGLATDGPQGE--DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSF 274
+LD + K++DFGLA D E H T + A E + T TT DV+SF
Sbjct: 182 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 241
Query: 275 GVVLLELLT 283
GV+L EL+T
Sbjct: 242 GVLLWELMT 250
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 20 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 70
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA AR + +LH
Sbjct: 71 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHA-- 126
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT + SH + G+ + APE I +
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ + DV++FG+VL EL+TG+ N R++ + R L D +K+ R
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 245
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP+ ++ +E L
Sbjct: 246 M---------KRLMA---ECLKKKRDERPSFPRILAEIEEL 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 31 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 83 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 139
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYT----AREGAKFPIKWTAPEAI 192
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ + K VAVK + GS +LAE + L+H LV
Sbjct: 196 LGAGQFGEVWMATYN-------KHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ E+MA G+L D L + S P I + A +AF+ E++
Sbjct: 248 LHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI--EQRN 304
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLAR---VIEDNEYT----AREGAKFPIKWTAPEAI 357
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L+E++T R
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 138/309 (44%), Gaps = 28/309 (9%)
Query: 64 SNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS 123
S VF E ++ + S LG+G FG VY+G ++ + + VA+K ++ S
Sbjct: 1 SAADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 59
Query: 124 QGHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHD-------QLFK 175
R E+L E + + H+V L+G + + L++ E M G+L ++
Sbjct: 60 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 119
Query: 176 NYSSTLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
N P L++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCK 294
D + + + + +PE + G TT DV+SFGVVL E+ T
Sbjct: 178 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 226
Query: 295 REKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTV 354
L E L + L +++ L D+ L + C +NPK RP+ +
Sbjct: 227 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 281
Query: 355 VKALEPLLD 363
+ +++ ++
Sbjct: 282 ISSIKEEME 290
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 27 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 79 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 135
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYT----AREGAKFPIKWTAPEAI 188
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 30 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 82 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 138
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXT----AREGAKFPIKWTAPEAI 191
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 192 NYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 73 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 129
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXT----AREGAKFPIKWTAPEAI 182
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 23 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 74
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 75 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXT----AREGAKFPIKWTAPEAI 184
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 185 NYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 26 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 79
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 80 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 138
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + +L K ++RD A N +LD + K++D
Sbjct: 139 RN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVAD 195
Query: 230 FGLATDGPQGE--DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 196 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 6 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 59
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 60 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 118
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + +L K ++RD A N +LD + K++D
Sbjct: 119 RN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 230 FGLATDGPQGEDS--HITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 176 FGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 26 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 77
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 78 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 134
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYT----AREGAKFPIKWTAPEAI 187
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P S T
Sbjct: 118 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTX 165
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 256
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 7 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 60
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 61 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + +L K ++RD A N +LD + K++D
Sbjct: 120 RN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 230 FGLATDGPQGE--DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 73 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 129
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXT----AREGAKFPIKWTAPEAI 182
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 22/200 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ + + + VAVK + GS +LAE + L+H LV
Sbjct: 190 LGAGQFGEVWMATYNKHTK-------VAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ E+MA G+L D L + S P I + A +AF+ E++
Sbjct: 242 LHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI--EQRN 298
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD +A+NIL+ + K++DFGLA G + + APE IN G T
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK-----------WTAPEAINFGSFT 347
Query: 267 TMCDVFSFGVVLLELLTGRR 286
DV+SFG++L+E++T R
Sbjct: 348 IKSDVWSFGILLMEIVTYGR 367
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 49/296 (16%)
Query: 69 FTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE 128
+KEL+++ +G+G FG V G + VAVK + + + +
Sbjct: 190 LNMKELKLL-------QTIGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QA 232
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRI 187
+LAE + QL+H +LV L+G E++ L +V EYMA G+L D L S L +
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
K ++ + +L G ++RD A N+L+ D AK+SDFGL + +D+
Sbjct: 293 KFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ APE + +T DV+SFG++L E+ + R V + R L
Sbjct: 351 -----KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPL 392
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAK----RLAAVAHQCLSHNPKSRPTMTTVVKALE 359
KD + R+E Y + + V C + +RPT + + LE
Sbjct: 393 KD-------VVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 22 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 74 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 130
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXT----AREGAKFPIKWTAPEAI 183
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 184 NYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 138/301 (45%), Gaps = 32/301 (10%)
Query: 70 TLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREW 129
+L + +M + + LG G FG+VY+G + TVAVK L + + E+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EF 54
Query: 130 LAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
L E + ++KHP+LV L+G C + ++ E+M GNL D L + + + + +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
A + + +L E+K I+RD A N L+ ++ K++DFGL+ G+
Sbjct: 115 ATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAK 171
Query: 250 GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKD 309
+ APE + + DV++FGV+L E+ T S P + D
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-D 215
Query: 310 FTKLDQII--DSRLEDRYSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLND 366
+++ +++ D R+E EG +++ + C NP RP+ + +A E + +
Sbjct: 216 PSQVYELLEKDYRME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
Query: 367 I 367
I
Sbjct: 273 I 273
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 16 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 67
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 68 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 124
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYT----AREGAKFPIKWTAPEAI 177
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 57
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K+++FG + P S
Sbjct: 118 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAP----SSR 165
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 259
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 73 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 129
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYT----AREGAKFPIKWTAPEAI 182
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P S T
Sbjct: 118 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTE 165
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 256
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 133/296 (44%), Gaps = 28/296 (9%)
Query: 73 ELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLA 131
E ++ + S LG+G FG VY+G ++ + + VA+K ++ S R E+L
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLN 62
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHD-------QLFKNYSSTLPWL 184
E + + H+V L+G + + L++ E M G+L ++ N P L
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 185 TR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH 243
++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+ D + +
Sbjct: 123 SKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 244 ITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWA 303
+ + +PE + G TT DV+SFGVVL E+ T L E
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQP 225
Query: 304 RPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
L + L +++ L D+ L + C +NPK RP+ ++ +++
Sbjct: 226 YQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 4 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 57
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 58 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 116
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + +L K ++RD A N +LD + K++D
Sbjct: 117 RN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVAD 173
Query: 230 FGLATDGPQGE--DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 174 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 122/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 56
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K+++FG + P S
Sbjct: 117 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAP----SSR 164
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 165 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 224
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 225 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 258
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 5 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 58
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 59 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 117
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + +L K ++RD A N +LD + K++D
Sbjct: 118 RN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 230 FGLATDGPQGE--DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 175 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 6 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 59
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 60 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 118
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + +L K ++RD A N +LD + K++D
Sbjct: 119 RN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 230 FGLATDGPQGE--DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 176 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 121/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY G ++ +L K + T ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 120 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 167
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
T + GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 228 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 261
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 2 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 55
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 56 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 114
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + +L K ++RD A N +LD + K++D
Sbjct: 115 RN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVAD 171
Query: 230 FGLATDGPQGE--DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 172 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 52 ISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQ 111
I L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 7 IDLSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIH 60
Query: 112 TVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNL 169
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L
Sbjct: 61 C-AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSD 229
+ +N + I + A+ + +L K ++RD A N +LD + K++D
Sbjct: 120 RN-FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 230 FGLATDGPQGE--DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
FGLA D E H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 69 FTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE 128
+KEL+++ +G+G FG V G + VAVK + + + +
Sbjct: 9 LNMKELKLLQT-------IGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QA 51
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRI 187
+LAE + QL+H +LV L+G E++ L +V EYMA G+L D L S L +
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 111
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
K ++ + +L G ++RD A N+L+ D AK+SDFGL + +D+
Sbjct: 112 KFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 169
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRR 286
+ APE + +T DV+SFG++L E+ + R
Sbjct: 170 -----KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 120/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 80
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 81 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P +
Sbjct: 141 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL 192
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 193 C----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 248
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 249 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 282
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 121/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 56
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 57 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 117 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 164
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 165 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 224
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 225 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 258
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P S T
Sbjct: 118 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTD 165
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 256
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 30/239 (12%)
Query: 49 GSPISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGL 108
GS + +E S G L++ LK LQ I G+G FG V G
Sbjct: 3 GSVAAQDEFYRS--GWALNMKELKLLQTI----------GKGEFGDVMLG--------DY 42
Query: 109 KAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALG 167
+ VAVK + + + + +LAE + QL+H +LV L+G E++ L +V EYMA G
Sbjct: 43 RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 100
Query: 168 NLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKL 227
+L D L S L +K ++ + +L G ++RD A N+L+ D AK+
Sbjct: 101 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKV 158
Query: 228 SDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRR 286
SDFGL + +D+ + APE + +T DV+SFG++L E+ + R
Sbjct: 159 SDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 212
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 69 FTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE 128
+KEL+++ +G+G FG V G + VAVK + + + +
Sbjct: 3 LNMKELKLLQT-------IGKGEFGDVMLG--------DYRGNKVAVKCIKNDATA--QA 45
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRI 187
+LAE + QL+H +LV L+G E++ L +V EYMA G+L D L S L +
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
K ++ + +L G ++RD A N+L+ D AK+SDFGL + +D+
Sbjct: 106 KFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRR 286
+ APE + +T DV+SFG++L E+ + R
Sbjct: 164 -----KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 35 VHEFA-KELD--ATNISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 88
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V E M G+L D + + + +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVI 147
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 148 QLVGMLRGIASGMKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 203
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 121/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 57
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++
Sbjct: 58 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 118 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 165
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 259
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 136/301 (45%), Gaps = 51/301 (16%)
Query: 84 SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL-KHP 142
D +GEG FG+V K + + GL+ ++ + HR++ E+ L +L HP
Sbjct: 27 QDVIGEGNFGQVLKARIK---KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 83
Query: 143 HLVNLIGYCCEDEHRLLVY---EYMALGNLHDQLFKNY--------------SSTLPWLT 185
+++NL+G C EHR +Y EY GNL D L K+ +STL
Sbjct: 84 NIINLLGAC---EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 186 RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ A AR + +L +K I+R+ A NIL+ +Y AK++DFGL+ +G++ ++
Sbjct: 141 LLHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLS----RGQEVYVK 194
Query: 246 TCVMGT--EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVEW 302
MG + A E +N TT DV+S+GV+L E+++ G C + +
Sbjct: 195 K-TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 253
Query: 303 ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
+ K D++ D + QC P RP+ ++ +L +L
Sbjct: 254 GYRLEKPLNCDDEVYD-----------------LMRQCWREKPYERPSFAQILVSLNRML 296
Query: 363 D 363
+
Sbjct: 297 E 297
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 32/284 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 22 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 74
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 75 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 132
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 192 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 233
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
EG +++ + C NP RP+ + +A E + + I
Sbjct: 234 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 32/284 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--EKKN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 232
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
EG +++ + C NP RP+ + +A E + + I
Sbjct: 233 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 32/301 (10%)
Query: 70 TLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREW 129
+L + +M + + LG G +G+VY+G + TVAVK L + + E+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EF 54
Query: 130 LAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
L E + ++KHP+LV L+G C + ++ E+M GNL D L + + + + +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
A + + +L E+K I+RD A N L+ ++ K++DFGL+ G+
Sbjct: 115 ATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAK 171
Query: 250 GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKD 309
+ APE + + DV++FGV+L E+ T S P + D
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-D 215
Query: 310 FTKLDQII--DSRLEDRYSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLND 366
+++ +++ D R+E EG +++ + C NP RP+ + +A E + +
Sbjct: 216 PSQVYELLEKDYRME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
Query: 367 I 367
I
Sbjct: 273 I 273
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 121 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAA 168
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 229 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 118 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAA 165
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 256
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 28/305 (9%)
Query: 64 SNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS 123
S V+ E ++ + S LG+G FG VY+G ++ + + VA+K ++ S
Sbjct: 10 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 68
Query: 124 QGHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHD-------QLFK 175
R E+L E + + H+V L+G + + L++ E M G+L ++
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 128
Query: 176 NYSSTLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
N P L++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCK 294
D + + + + +PE + G TT DV+SFGVVL E+ T
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 235
Query: 295 REKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTV 354
L E L + L +++ L D+ L + C +NPK RP+ +
Sbjct: 236 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 290
Query: 355 VKALE 359
+ +++
Sbjct: 291 ISSIK 295
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 32/284 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--EKKN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 232
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
EG +++ + C NP RP+ + +A E + + I
Sbjct: 233 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 38/287 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--EKKN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
I+RD A N L+ ++ K++DFGL+ + T G + + APE +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRL 321
+ DV++FGV+L E+ T S P + D +++ +++ D R+
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRM 231
Query: 322 EDRYSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
E EG +++ + C NP RP+ + +A E + + I
Sbjct: 232 E---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 38/287 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 26 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--EKKN 136
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
I+RD A N L+ ++ K++DFGL+ + T G + + APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRL 321
+ DV++FGV+L E+ T S P + D +++ +++ D R+
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRM 236
Query: 322 EDRYSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
E EG +++ + C NP RP+ + +A E + + I
Sbjct: 237 E---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 32/284 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--EKKN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 232
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
EG +++ + C NP RP+ + +A E + + I
Sbjct: 233 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 6 VHEFA-KELD--ATNISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 59
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V E M G+L D + + + +
Sbjct: 60 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVI 118
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 119 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 174
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 175 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 28/309 (9%)
Query: 64 SNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS 123
S V+ E ++ + S LG+G FG VY+G ++ + + VA+K ++ S
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 62
Query: 124 QGHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHD-------QLFK 175
R E+L E + + H+V L+G + + L++ E M G+L ++
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 176 NYSSTLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
N P L++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCK 294
D + + + + +PE + G TT DV+SFGVVL E+ T
Sbjct: 181 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 229
Query: 295 REKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTV 354
L E L + L +++ L D+ L + C +NPK RP+ +
Sbjct: 230 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 284
Query: 355 VKALEPLLD 363
+ +++ ++
Sbjct: 285 ISSIKEEME 293
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 28/305 (9%)
Query: 64 SNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS 123
S V+ E ++ + S LG+G FG VY+G ++ + + VA+K ++ S
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 61
Query: 124 QGHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHD-------QLFK 175
R E+L E + + H+V L+G + + L++ E M G+L ++
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 176 NYSSTLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
N P L++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCK 294
D + + + + +PE + G TT DV+SFGVVL E+ T
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 228
Query: 295 REKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTV 354
L E L + L +++ L D+ L + C +NPK RP+ +
Sbjct: 229 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 283
Query: 355 VKALE 359
+ +++
Sbjct: 284 ISSIK 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 28/309 (9%)
Query: 64 SNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS 123
S V+ E ++ + S LG+G FG VY+G ++ + + VA+K ++ S
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 61
Query: 124 QGHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHD-------QLFK 175
R E+L E + + H+V L+G + + L++ E M G+L ++
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 176 NYSSTLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
N P L++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCK 294
D + + + + +PE + G TT DV+SFGVVL E+ T
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 228
Query: 295 REKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTV 354
L E L + L +++ L D+ L + C +NPK RP+ +
Sbjct: 229 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 283
Query: 355 VKALEPLLD 363
+ +++ ++
Sbjct: 284 ISSIKEEME 292
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLA------REKNSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P +
Sbjct: 118 ------ANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA----A 165
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTF 225
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 256
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 28/305 (9%)
Query: 64 SNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS 123
S V+ E ++ + S LG+G FG VY+G ++ + + VA+K ++ S
Sbjct: 10 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 68
Query: 124 QGHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL-------FK 175
R E+L E + + H+V L+G + + L++ E M G+L L
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMAN 128
Query: 176 NYSSTLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
N P L++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 186
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCK 294
D + + + + +PE + G TT DV+SFGVVL E+ T
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 235
Query: 295 REKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTV 354
L E L + L +++ L D+ L + C +NPK RP+ +
Sbjct: 236 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 290
Query: 355 VKALE 359
+ +++
Sbjct: 291 ISSIK 295
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 66 LHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG 125
+H F KEL N S +G G FG+V G + P K +VA+K L V ++
Sbjct: 35 VHEFA-KELDAT--NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEK 88
Query: 126 HR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
R ++L E +GQ HP+++ L G + + ++V E M G+L D + + + +
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVI 147
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGED 241
+ + G A + +L + ++RD A NIL++S+ K+SDFGL+ D P E
Sbjct: 148 QLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EA 203
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
++ T + +PE I T+ DV+S+G+VL E+++
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 28/309 (9%)
Query: 64 SNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS 123
S V+ E ++ + S LG+G FG VY+G ++ + + VA+K ++ S
Sbjct: 32 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS 90
Query: 124 QGHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHD-------QLFK 175
R E+L E + + H+V L+G + + L++ E M G+L ++
Sbjct: 91 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 150
Query: 176 NYSSTLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
N P L++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+
Sbjct: 151 NPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 208
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCK 294
D + + + + +PE + G TT DV+SFGVVL E+ T
Sbjct: 209 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 257
Query: 295 REKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTV 354
L E L + L +++ L D+ L + C +NPK RP+ +
Sbjct: 258 ----LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 312
Query: 355 VKALEPLLD 363
+ +++ ++
Sbjct: 313 ISSIKEEME 321
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 36 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 86
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA A+ + +LH
Sbjct: 87 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA-- 142
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT+ + SH + G+ + APE I +
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ DV++FG+VL EL+TG+ N R++ + R L D +K+
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRS----- 256
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP ++ ++E L
Sbjct: 257 ----NCPKAMKRLMA---ECLKKKRDERPLFPQILASIELL 290
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G +++ + VAVK L G+ + +L E + L+H LV
Sbjct: 21 LGAGQFGEVWMGYYNNSTK-------VAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L +E ++ EYMA G+L D L + + I + A +A++ E K
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI--ERKN 130
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+N+L+ K++DFGLA ED+ T EG + APE I
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYT----AREGAKFPIKWTAPEAI 183
Query: 261 NTGHLTTMCDVFSFGVVLLELLT 283
N G T DV+SFG++L E++T
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 32/284 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 23 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 75
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 133
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 193 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 234
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
EG +++ + C NP RP+ + +A E + + I
Sbjct: 235 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 15/240 (6%)
Query: 48 PGSPISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPG 107
PG+ ++ + +H F KEL R +G G FG+V G + PG
Sbjct: 15 PGTKTYIDPETYEDPNRAVHQFA-KELDASCIKIER--VIGAGEFGEVCSGRLK---LPG 68
Query: 108 LKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMAL 166
+ VA+K L V ++ R ++L E +GQ HP++V+L G + ++V E+M
Sbjct: 69 KRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMEN 128
Query: 167 GNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAK 226
G L D + + + + + G A + +L + ++RD A NIL++S+ K
Sbjct: 129 GAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYL--ADMGYVHRDLAARNILVNSNLVCK 185
Query: 227 LSDFGLA---TDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+SDFGL+ D P E + TT + APE I T+ DV+S+G+V+ E+++
Sbjct: 186 VSDFGLSRVIEDDP--EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 28/301 (9%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR 127
V+ E ++ + S LG+G FG VY+G ++ + + VA+K ++ S R
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRER 62
Query: 128 -EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL-------FKNYSS 179
E+L E + + H+V L+G + + L++ E M G+L L N
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 180 TLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQ 238
P L++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+ D +
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 239 GEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKD 298
+ + + +PE + G TT DV+SFGVVL E+ T
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 225
Query: 299 LVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
L E L + L +++ L D+ L + C +NPK RP+ ++ ++
Sbjct: 226 LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
Query: 359 E 359
+
Sbjct: 285 K 285
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 32/284 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 34 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 86
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 87 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 144
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 204 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 245
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
EG +++ + C NP RP+ + +A E + + I
Sbjct: 246 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 288
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 38/287 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 26 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 136
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
I+RD A N L+ ++ K++DFGL+ + T G + + APE +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRL 321
+ DV++FGV+L E+ T S P + D +++ +++ D R+
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRM 236
Query: 322 EDRYSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
E EG +++ + C NP RP+ + +A E + + I
Sbjct: 237 E---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA A+ + +LH
Sbjct: 67 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 122
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT+ + SH + G+ + APE I +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ DV++FG+VL EL+TG+ N R++ + R L D +K+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRS----- 236
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP ++ ++E L
Sbjct: 237 ----NCPKAMKRLMA---ECLKKKRDERPLFPQILASIELL 270
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 38/287 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 23 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 75
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 133
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
I+RD A N L+ ++ K++DFGL+ + T G + + APE +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRL 321
+ DV++FGV+L E+ T S P + D +++ +++ D R+
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRM 233
Query: 322 EDRYSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
E EG +++ + C NP RP+ + +A E + + I
Sbjct: 234 E---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 14/234 (5%)
Query: 54 LNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTV 113
L+ L+ LV + HV + +I H ++ +G G FG VY G + DN G K
Sbjct: 1 LSALNPELVQAVQHV-VIGPSSLIVH---FNEVIGRGHFGCVYHGTLLDN--DGKKIHC- 53
Query: 114 AVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHR-LLVYEYMALGNLHD 171
AVK L+ G ++L E I + HP++++L+G C E L+V YM G+L +
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 172 QLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFG 231
+N + I + A+ + +L K ++RD A N +LD + K++DFG
Sbjct: 114 -FIRNETHNPTVKDLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFG 170
Query: 232 LATDGPQGE--DSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
LA D E H T + A E + T TT DV+SFGV+L EL+T
Sbjct: 171 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 26 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 79 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 136
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 237
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
EG +++ + C NP RP+ + +A E +
Sbjct: 238 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 124/282 (43%), Gaps = 28/282 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHLV 145
LG+G FG VY+G D ++ G VAVK ++ + S R E+L E + H+V
Sbjct: 26 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLF-------KNYSSTLPWLTR-IKIAIGAARCL 197
L+G + + L+V E MA G+L L N P L I++A A +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
A+L+ K ++R+ A N ++ D+ K+ DFG+ D + + + + AP
Sbjct: 145 AYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 258 EYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII 317
E + G TT D++SFGVVL E+ + L E L + L ++
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFVM 247
Query: 318 DSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
D D+ +R+ + C NP RPT +V L+
Sbjct: 248 DGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 118 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXX 165
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 226 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 256
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 124/282 (43%), Gaps = 28/282 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHLV 145
LG+G FG VY+G D ++ G VAVK ++ + S R E+L E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLF-------KNYSSTLPWLTR-IKIAIGAARCL 197
L+G + + L+V E MA G+L L N P L I++A A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
A+L+ K ++R+ A N ++ D+ K+ DFG+ D + + + + AP
Sbjct: 144 AYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 258 EYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII 317
E + G TT D++SFGVVL E+ + L E L + L ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFVM 246
Query: 318 DSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
D D+ +R+ + C NP RPT +V L+
Sbjct: 247 DGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 17 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 68
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 69 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 125
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+R+ +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLAR---LIEDNEYT----AREGAKFPIKWTAPEAI 178
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 120/292 (41%), Gaps = 43/292 (14%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHRE 128
K+ Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQ 59
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWL 184
EV L+HP+++ L GY + L+ EY G ++ +L K + T ++
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
T + A L++ H K VI+RD K N+LL S K++DFG + P S
Sbjct: 120 TEL------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSR 167
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
+ GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 168 RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 228 FTFPDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 261
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 38/304 (12%)
Query: 70 TLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREW 129
+L + +M + + LG G +G+VY+G + TVAVK L + + E+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EF 54
Query: 130 LAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
L E + ++KHP+LV L+G C + ++ E+M GNL D L + + + + +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
A + + +L E+K I+RD A N L+ ++ K++DFGL+ + T
Sbjct: 115 ATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLS----RLMTGDTFTAHA 168
Query: 250 GTE---GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPM 306
G + + APE + + DV++FGV+L E+ T S P
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPG 213
Query: 307 LKDFTKLDQII--DSRLEDRYSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
+ D +++ +++ D R+E EG +++ + C NP RP+ + +A E +
Sbjct: 214 I-DPSQVYELLEKDYRME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
Query: 364 LNDI 367
+ I
Sbjct: 270 ESSI 273
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 118/289 (40%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S K++DFG + P +
Sbjct: 121 ------ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-- 170
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
GT Y PE I D++S GV+ E L G+ E N + +
Sbjct: 171 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HNP RP + V++
Sbjct: 229 PDFV---------------TEGARDLIS---RLLKHNPSQRPMLREVLE 259
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 26 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 136
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 237
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
EG +++ + C NP RP+ + +A E +
Sbjct: 238 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 44 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA A+ + +LH
Sbjct: 95 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA-- 150
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT+ + SH + G+ + APE I +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ DV++FG+VL EL+TG+ N R++ + R L D +K+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRS----- 264
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP ++ ++E L
Sbjct: 265 ----NCPKAMKRLMA---ECLKKKRDERPLFPQILASIELL 298
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 38/287 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 228 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 280
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 281 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--EKKN 338
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
I+R+ A N L+ ++ K++DFGL+ + T G + + APE +
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYN 394
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRL 321
+ DV++FGV+L E+ T S P + D +++ +++ D R+
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRM 438
Query: 322 EDRYSTEG-AKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
E EG +++ + C NP RP+ + +A E + + I
Sbjct: 439 E---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 482
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 26 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 78
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 136
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 237
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
EG +++ + C NP RP+ + +A E +
Sbjct: 238 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 28/305 (9%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR 127
V+ E ++ + S LG+G FG VY+G ++ + + VA+K ++ S R
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRER 59
Query: 128 -EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHD-------QLFKNYSS 179
E+L E + + H+V L+G + + L++ E M G+L ++ N
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 180 TLPWLTR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQ 238
P L++ I++A A +A+L+ + ++RD A N + D+ K+ DFG+ D +
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 239 GEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKD 298
+ + + +PE + G TT DV+SFGVVL E+ T
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 222
Query: 299 LVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
L E L + L +++ L D+ L + C +NPK RP+ ++ ++
Sbjct: 223 LAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
Query: 359 EPLLD 363
+ ++
Sbjct: 282 KEEME 286
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHLV 145
+G G FG+V G + PG + VA+K L V ++ R ++L E +GQ HP+++
Sbjct: 30 IGAGEFGEVCSGRLK---LPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
+L G + + ++V EYM G+L D K + + + G + + +L +
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYL--SDM 143
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAAPEYINT 262
++RD A NIL++S+ K+SDFGL+ D P E ++ T + APE I
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--EAAYTTRGGKIPIRWTAPEAIAF 201
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
T+ DV+S+G+V+ E+++
Sbjct: 202 RKFTSASDVWSYGIVMWEVVS 222
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 232
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
EG +++ + C NP RP+ + +A E +
Sbjct: 233 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 28/300 (9%)
Query: 73 ELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLA 131
E ++ + S LG+G FG VY+G ++ + + VA+K ++ S R E+L
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLN 64
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHD-------QLFKNYSSTLPWL 184
E + + H+V L+G + + L++ E M G+L ++ N P L
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 185 TR-IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH 243
++ I++A A +A+L+ + ++RD A N ++ D+ K+ DFG+ D + +
Sbjct: 125 SKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 244 ITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWA 303
+ + +PE + G TT DV+SFGVVL E+ T L E
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQP 227
Query: 304 RPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
L + L +++ L D+ L + C +NPK RP+ ++ +++ ++
Sbjct: 228 YQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 129/281 (45%), Gaps = 39/281 (13%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQL 139
F++ + +G+G FG+V+KG +D+ + Q VA+K++D+ ++ E + E+ L Q
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQ-----QVVAIKIIDLEEAEDEIEDIQQEITVLSQC 78
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
++ G + ++ EY+ G+ D L T +K + + L +
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDY 135
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT-TCVMGTEGYAAPE 258
LH E+K I+RD KA+N+LL + KL+DFG+A Q D+ I +GT + APE
Sbjct: 136 LHSEKK--IHRDIKAANVLLSEQGDVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPE 190
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARP--MLKDFTK-LDQ 315
I + D++S G+ +EL G R L+ P ++ DFTK +
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKE 250
Query: 316 IIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
ID+ CL+ +P RPT ++K
Sbjct: 251 FIDA--------------------CLNKDPSFRPTAKELLK 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 73
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 232
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
EG +++ + C NP RP+ + +A E +
Sbjct: 233 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 25 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 77
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 135
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD A N L+ ++ K++DFGL+ G+ + APE + +
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRLEDR 324
DV++FGV+L E+ T S P + D +++ +++ D R+E
Sbjct: 195 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRME-- 236
Query: 325 YSTEGA-KRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
EG +++ + C NP RP+ + +A E +
Sbjct: 237 -RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 274
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + YS L L I A + LA+L E
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASL--ILYAYQLSTALAYL--ES 129
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ S+ KL DFGL+ EDS G + APE IN
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 87 LGEGGFGKVY-----KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKH 141
LG+G FGKV+ G L + +KV D ++ R+ L EV H
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------NH 85
Query: 142 PHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
P +V L Y + E +L L+ +++ G+L +L K T +K + A LA
Sbjct: 86 PFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYL-AELALALD 140
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
H +IYRD K NILLD + + KL+DFGL+ + E + C GT Y APE +
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVV 198
Query: 261 NTGHLTTMCDVFSFGVVLLELLTG 284
N T D +SFGV++ E+LTG
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 80 NFSRSDYLGEGGFGKVY-----KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVI 134
F LG+G FGKV+ G L + +KV D ++ R+ L EV
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV- 83
Query: 135 FLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGA 193
HP +V L Y + E +L L+ +++ G+L +L K T +K + A
Sbjct: 84 -----NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYL-A 133
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
LA H +IYRD K NILLD + + KL+DFGL+ + E + C GT
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVE 191
Query: 254 YAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
Y APE +N T D +SFGV++ E+LTG
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 80 NFSRSDYLGEGGFGKVY-----KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVI 134
F LG+G FGKV+ G L + +KV D ++ R+ L EV
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV- 84
Query: 135 FLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGA 193
HP +V L Y + E +L L+ +++ G+L +L K T +K + A
Sbjct: 85 -----NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYL-A 134
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
LA H +IYRD K NILLD + + KL+DFGL+ + E + C GT
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVE 192
Query: 254 YAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
Y APE +N T D +SFGV++ E+LTG
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 85 DYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPH 143
+ +G G FG+V +G + PG K VA+K L ++ R E+L+E +GQ +HP+
Sbjct: 22 EVIGAGEFGEVCRGRLKA---PGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
++ L G +++ E+M G L D + + + + G A + +L
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQFTVIQLVGMLRGIASGMRYLA-- 135
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYI 260
E ++RD A NIL++S+ K+SDFGL+ + T +G + + APE I
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 261 NTGHLTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDS 319
T+ D +S+G+V+ E+++ G R W D + D I +
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGERPY-------------W------DMSNQDVI--N 234
Query: 320 RLEDRYSTEGAKRLAAVAHQ----CLSHNPKSRPTMTTVVKALEPLL 362
+E Y HQ C + +RP VV AL+ ++
Sbjct: 235 AIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 102/206 (49%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G G+V+ G + + + VAVK L GS +LAE + QL+H LV
Sbjct: 21 LGAGQAGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L + E ++ EYM G+L D L L + +A A +AF+ EE+
Sbjct: 73 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERN 129
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+NIL+ + K++DFGLA ED+ T EG + APE I
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLAR---LIEDAEXT----AREGAKFPIKWTAPEAI 182
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRR 286
N G T DV+SFG++L E++T R
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 38/287 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 267 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 319
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 320 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 377
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
I+R+ A N L+ ++ K++DFGL+ + T G + + APE +
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYN 433
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRL 321
+ DV++FGV+L E+ T S P + D +++ +++ D R+
Sbjct: 434 KFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRM 477
Query: 322 EDRYSTEG-AKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
E EG +++ + C NP RP+ + +A E + + I
Sbjct: 478 E---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 521
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 38/287 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G +G+VY+G + TVAVK L + + E+L E + ++KHP+LV
Sbjct: 225 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 277
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L+G C + ++ E+M GNL D L + + + + +A + + +L E+K
Sbjct: 278 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL--EKKN 335
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
I+R+ A N L+ ++ K++DFGL+ + T G + + APE +
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYN 391
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII--DSRL 321
+ DV++FGV+L E+ T S P + D +++ +++ D R+
Sbjct: 392 KFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRM 435
Query: 322 EDRYSTEG-AKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
E EG +++ + C NP RP+ + +A E + + I
Sbjct: 436 E---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 479
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + +S L L I A + LA+L E
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASL--ILYAYQLSTALAYL--ES 129
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ S+ KL DFGL+ EDS G + APE IN
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTXXKASKGKLPIKWMAPESINF 186
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 131/309 (42%), Gaps = 30/309 (9%)
Query: 60 SLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL- 118
S G + LKE+ N + LG G FG+VY+G V Q VAVK L
Sbjct: 14 SFAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLP 70
Query: 119 DVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--- 175
+V Q ++L E + + +L H ++V IG + R ++ E MA G+L L +
Sbjct: 71 EVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 176 --NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDF 230
+ S+L L + +A A +L EE I+RD A N LL AK+ DF
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 231 GLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEK 290
G+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 189 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMP 246
Query: 291 NRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPT 350
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 247 YPSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPN 292
Query: 351 MTTVVKALE 359
+++ +E
Sbjct: 293 FAIILERIE 301
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK 140
F + LGEG +G VYK + Q VA+K + V +E + E+ + Q
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKET------GQIVAIKQVPVESD--LQEIIKEISIMQQCD 82
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
PH+V G ++ +V EY G++ D + + + TL I + L +L
Sbjct: 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYL 141
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
H K I+RD KA NILL+++ +AKL+DFG+A G + V+GT + APE I
Sbjct: 142 HFMRK--IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVI 197
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGR 285
+ D++S G+ +E+ G+
Sbjct: 198 QEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
LGEG FG+VY+G ++ G K VAVK + + ++E +++E + + L HPH+V
Sbjct: 32 LGEGFFGEVYEGVYTNH--KGEKIN-VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
LIG E+E ++ E G L L +N +S L LT + ++ + +A+L E
Sbjct: 89 KLIG-IIEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYL--ESI 144
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
++RD NIL+ S KL DFGL+ + ED + + + +PE IN
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 266 TTMCDVFSFGVVLLELLT 283
TT DV+ F V + E+L+
Sbjct: 204 TTASDVWMFAVCMWEILS 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 46 IGEGQFGDVHQGIY---MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + YS L L I A + LA+L E
Sbjct: 103 KLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASL--ILYAYQLSTALAYL--ES 157
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ S+ KL DFGL+ EDS G + APE IN
Sbjct: 158 KRFVHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINF 214
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 215 RRFTSASDVWMFGVCMWEIL 234
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 85 DYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPH 143
+ +G G FG+V +G + PG K VA+K L ++ R E+L+E +GQ +HP+
Sbjct: 20 EVIGAGEFGEVCRGRLKA---PGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
++ L G +++ E+M G L D + + + + G A + +L
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQFTVIQLVGMLRGIASGMRYLA-- 133
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYI 260
E ++RD A NIL++S+ K+SDFGL+ + T +G + + APE I
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 261 NTGHLTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDS 319
T+ D +S+G+V+ E+++ G R W D + D I +
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGERPY-------------W------DMSNQDVI--N 232
Query: 320 RLEDRYSTEGAKRLAAVAHQ----CLSHNPKSRPTMTTVVKALEPLL 362
+E Y HQ C + +RP VV AL+ ++
Sbjct: 233 AIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 23 IGEGQFGDVHQGIY---MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + YS L L I A + LA+L E
Sbjct: 80 KLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASL--ILYAYQLSTALAYL--ES 134
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ S+ KL DFGL+ EDS G + APE IN
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINF 191
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 192 RRFTSASDVWMFGVCMWEIL 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + YS L L I A + LA+L E
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASL--ILYAYQLSTALAYL--ES 129
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ S+ KL DFGL+ EDS G + APE IN
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
LGEG FG+VY+G ++ G K VAVK + + ++E +++E + + L HPH+V
Sbjct: 16 LGEGFFGEVYEGVYTNH--KGEKIN-VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
LIG E+E ++ E G L L +N +S L LT + ++ + +A+L E
Sbjct: 73 KLIG-IIEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYL--ESI 128
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
++RD NIL+ S KL DFGL+ + ED + + + +PE IN
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 266 TTMCDVFSFGVVLLELLT 283
TT DV+ F V + E+L+
Sbjct: 188 TTASDVWMFAVCMWEILS 205
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 18 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 68
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA A+ + +LH
Sbjct: 69 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 124
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT + SH + G+ + APE I +
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ DV++FG+VL EL+TG+ N R++ + R L D +K+
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRS----- 238
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP ++ ++E L
Sbjct: 239 ----NCPKAMKRLMA---ECLKKKRDERPLFPQILASIELL 272
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 20 IGEGQFGDVHQGIY---MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + YS L L I A + LA+L E
Sbjct: 77 KLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASL--ILYAYQLSTALAYL--ES 131
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ S+ KL DFGL+ EDS G + APE IN
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINF 188
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 21 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA A+ + +LH
Sbjct: 72 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 127
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT + SH + G+ + APE I +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ DV++FG+VL EL+TG+ N R++ + R L D +K+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRS----- 241
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP ++ ++E L
Sbjct: 242 ----NCPKAMKRLMA---ECLKKKRDERPLFPQILASIELL 275
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 21 IGEGQFGDVHQGIY---MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + YS L L I A + LA+L E
Sbjct: 78 KLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASL--ILYAYQLSTALAYL--ES 132
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ S+ KL DFGL+ EDS G + APE IN
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINF 189
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
LGEG FG+VY+G ++ G K VAVK + + ++E +++E + + L HPH+V
Sbjct: 20 LGEGFFGEVYEGVYTNH--KGEKIN-VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
LIG E+E ++ E G L L +N +S L LT + ++ + +A+L E
Sbjct: 77 KLIG-IIEEEPTWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYL--ESI 132
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
++RD NIL+ S KL DFGL+ + ED + + + +PE IN
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 266 TTMCDVFSFGVVLLELLT 283
TT DV+ F V + E+L+
Sbjct: 192 TTASDVWMFAVCMWEILS 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 33/278 (11%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQL 139
F++ D +G+G FG+VYKG +D++ + + VA+K++D+ ++ E + E+ L Q
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTK-----EVVAIKIIDLEEAEDEIEDIQQEITVLSQC 74
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
P++ G + ++ EY+ G+ D L K ++ I I + L +
Sbjct: 75 DSPYITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREI--LKGLDY 131
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT-TCVMGTEGYAAPE 258
LH E K I+RD KA+N+LL + KL+DFG+A Q D+ I +GT + APE
Sbjct: 132 LHSERK--IHRDIKAANVLLSEQGDVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPE 186
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIID 318
I D++S G+ +EL G R L+ P
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP------------- 233
Query: 319 SRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
LE ++S K CL+ +P+ RPT ++K
Sbjct: 234 PTLEGQHS----KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 43 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 93
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA A+ + +LH
Sbjct: 94 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA-- 149
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT + SH + G+ + APE I +
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ DV++FG+VL EL+TG+ N R++ + R L D +K+
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRS----- 263
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP ++ ++E L
Sbjct: 264 ----NCPKAMKRLMA---ECLKKKRDERPLFPQILASIELL 297
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 40/306 (13%)
Query: 64 SNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS 123
NL+ ++ + +M + + LG G +G+VY G + TVAVK L +
Sbjct: 17 ENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKY------SLTVAVKTLKEDTM 70
Query: 124 QGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPW 183
+ E+L E + ++KHP+LV L+G C + +V EYM GNL D L + +
Sbjct: 71 EV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA 129
Query: 184 LTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH 243
+ + +A + + +L E+K I+RD A N L+ ++ K++DFGL+ +
Sbjct: 130 VVLLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHVVKVADFGLS----RLMTGD 183
Query: 244 ITTCVMGTE---GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLV 300
T G + + APE + + DV++FGV+L E+ T S
Sbjct: 184 TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG--------- 234
Query: 301 EWARPMLKDFTKLDQIIDSRLEDRYSTEGAK----RLAAVAHQCLSHNPKSRPTMTTVVK 356
L Q+ D LE Y E + ++ + C +P RP+ +
Sbjct: 235 ----------IDLSQVYD-LLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQ 283
Query: 357 ALEPLL 362
A E +
Sbjct: 284 AFETMF 289
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 21 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA A+ + +LH
Sbjct: 72 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 127
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT + SH + G+ + APE I +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ DV++FG+VL EL+TG+ N R++ + R L D +K+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRS----- 241
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP ++ ++E L
Sbjct: 242 ----NCPKAMKRLMA---ECLKKKRDERPLFPQILASIELL 275
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 44 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA A+ + +LH
Sbjct: 95 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA-- 150
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT + SH + G+ + APE I +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ DV++FG+VL EL+TG+ N R++ + R L D +K+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRS----- 264
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP ++ ++E L
Sbjct: 265 ----NCPKAMKRLMA---ECLKKKRDERPLFPQILASIELL 298
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 15 IGEGQFGDVHQGIY---MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + YS L L I A + LA+L E
Sbjct: 72 KLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASL--ILYAYQLSTALAYL--ES 126
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ S+ KL DFGL+ EDS G + APE IN
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINF 183
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 41/252 (16%)
Query: 65 NLHVFTLKELQMITHNFSRSDY-----LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD 119
+L V K L+ F R + LGEG FGKV K +L+ TVAVK+L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAF-HLKGRAGYTTVAVKMLK 62
Query: 120 VNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS 178
N S R+ L+E L Q+ HPH++ L G C +D LL+ EY G+L L ++
Sbjct: 63 ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRK 122
Query: 179 STLPWLTR----------------------IKIAIGAARCLAFLHGEEKPVIYRDFKASN 216
+L I A ++ + +L E +++RD A N
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARN 180
Query: 217 ILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG-----YAAPEYINTGHLTTMCDV 271
IL+ K+SDFGL+ D + EDS++ ++G + A E + TT DV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYE-EDSYVKR----SQGRIPVKWMAIESLFDHIYTTQSDV 235
Query: 272 FSFGVVLLELLT 283
+SFGV+L E++T
Sbjct: 236 WSFGVLLWEIVT 247
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + + +V ++ +L+ L + + I IA A+ + +LH
Sbjct: 67 LLFMGYSTKPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 122
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT + SH + G+ + APE I +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ DV++FG+VL EL+TG+ N R++ + R L D +K+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRS----- 236
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP ++ ++E L
Sbjct: 237 ----NCPKAMKRLMA---ECLKKKRDERPLFPQILASIELL 270
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 398 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + +S L L I A + LA+L E
Sbjct: 455 KLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASL--ILYAYQLSTALAYL--ES 509
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ S+ KL DFGL+ EDS G + APE IN
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 28/277 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+G G FG V+ G L VA+K + GS +++ E + +L HP LV
Sbjct: 35 IGSGQFGLVHLGY-------WLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L G C E LV+E+M G L D L + T + + + +A+L EE
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAC 143
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
VI+RD A N L+ + K+SDFG+ T + +T +A+PE + +
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 202
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYS 326
+ DV+SFGV++ E+ + + +NR E +++D + ++ RL
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 248
Query: 327 TEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
+ + + + C P+ RP + +++ L + +
Sbjct: 249 --ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 28/275 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+G G FG V+ G L VA+K + G+ +++ E + +L HP LV
Sbjct: 15 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L G C E LV+E+M G L D L + T + + + +A+L EE
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAS 123
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
VI+RD A N L+ + K+SDFG+ T + +T +A+PE + +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYS 326
+ DV+SFGV++ E+ + + +NR E +++D + ++ RL
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 228
Query: 327 TEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ + + + C P+ RP + +++ L +
Sbjct: 229 --ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 32/281 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G FG VYKG + VAVK+L+V Q + + EV L + +H ++
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ +GY + +V ++ +L+ L + + I IA A+ + +LH
Sbjct: 67 LLFMGYSTAPQ-LAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHA-- 122
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI---N 261
K +I+RD K++NI L D K+ DFGLAT + SH + G+ + APE I +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSR 320
+ DV++FG+VL EL+TG+ N R++ + R L D +K+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRS----- 236
Query: 321 LEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ KRL A +CL RP ++ ++E L
Sbjct: 237 ----NCPKAMKRLMA---ECLKKKRDERPLFPQILASIELL 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 33/278 (11%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQL 139
F++ + +G+G FG+V+KG +D+ + + VA+K++D+ ++ E + E+ L Q
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 82
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
P++ G +D ++ EY+ G+ D L T ++ + + L +
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDY 139
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT-TCVMGTEGYAAPE 258
LH E+K I+RD KA+N+LL KL+DFG+A Q D+ I +GT + APE
Sbjct: 140 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPE 194
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIID 318
I + D++S G+ +EL G + + L+ P
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------- 241
Query: 319 SRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
LE YS K L CL+ P RPT ++K
Sbjct: 242 PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 129/309 (41%), Gaps = 30/309 (9%)
Query: 60 SLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL- 118
S G + LKE+ R LG G FG+VY+G V Q VAVK L
Sbjct: 14 SFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLP 70
Query: 119 DVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--- 175
+V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 71 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 176 --NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDF 230
+ S+L L + +A A +L EE I+RD A N LL AK+ DF
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 231 GLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEK 290
G+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 189 GMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMP 246
Query: 291 NRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPT 350
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 247 YPSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPN 292
Query: 351 MTTVVKALE 359
+++ +E
Sbjct: 293 FAIILERIE 301
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 30/309 (9%)
Query: 60 SLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL- 118
S G + LKE+ N + LG G FG+VY+G V Q VAVK L
Sbjct: 14 SFAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLP 70
Query: 119 DVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--- 175
+V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 71 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 176 --NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDF 230
+ S+L L + +A A +L EE I+RD A N LL AK+ DF
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 231 GLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEK 290
G+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 189 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMP 246
Query: 291 NRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPT 350
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 247 YPSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPN 292
Query: 351 MTTVVKALE 359
+++ +E
Sbjct: 293 FAIILERIE 301
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 28/277 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+G G FG V+ G L VA+K + G+ +++ E + +L HP LV
Sbjct: 15 IGSGQFGLVHLG-------YWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L G C E LV+E+M G L D L + T + + + +A+L EE
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAC 123
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
VI+RD A N L+ + K+SDFG+ T + +T +A+PE + +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYS 326
+ DV+SFGV++ E+ + + +NR E +++D + ++ RL
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 228
Query: 327 TEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
+ + + + C P+ RP + +++ L + +
Sbjct: 229 --ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 28/277 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+G G FG V+ G L VA+K + G+ +++ E + +L HP LV
Sbjct: 13 IGSGQFGLVHLG-------YWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L G C E LV+E+M G L D L + T + + + +A+L EE
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAC 121
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
VI+RD A N L+ + K+SDFG+ T + +T +A+PE + +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYS 326
+ DV+SFGV++ E+ + + +NR E +++D + ++ RL
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 226
Query: 327 TEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
+ + + + C P+ RP + +++ L + +
Sbjct: 227 --ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 23/203 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G +++ + VAVK L G+ + +L E + L+H LV
Sbjct: 20 LGAGQFGEVWMGYYNNSTK-------VAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L ++E ++ E+MA G+L D L + + I + A +A++ E K
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI--ERKN 129
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG------YAAPEYI 260
I+RD +A+N+L+ K++DFGLA ED+ T EG + APE I
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYT----AREGAKFPIKWTAPEAI 182
Query: 261 NTGHLTTMCDVFSFGVVLLELLT 283
N G T +V+SFG++L E++T
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 115/252 (45%), Gaps = 41/252 (16%)
Query: 65 NLHVFTLKELQMITHNFSRSDY-----LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD 119
+L V K L+ F R + LGEG FGKV K +L+ TVAVK+L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAF-HLKGRAGYTTVAVKMLK 62
Query: 120 VNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS 178
N S R+ L+E L Q+ HPH++ L G C +D LL+ EY G+L L ++
Sbjct: 63 ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRK 122
Query: 179 STLPWLTR----------------------IKIAIGAARCLAFLHGEEKPVIYRDFKASN 216
+L I A ++ + +L E +++RD A N
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARN 180
Query: 217 ILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL-----TTMCDV 271
IL+ K+SDFGL+ D + EDS + ++G +++ L TT DV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYE-EDSXVKR----SQGRIPVKWMAIESLFDHIYTTQSDV 235
Query: 272 FSFGVVLLELLT 283
+SFGV+L E++T
Sbjct: 236 WSFGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 115/252 (45%), Gaps = 41/252 (16%)
Query: 65 NLHVFTLKELQMITHNFSRSDY-----LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD 119
+L V K L+ F R + LGEG FGKV K +L+ TVAVK+L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAF-HLKGRAGYTTVAVKMLK 62
Query: 120 VNGSQGH-REWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS 178
N S R+ L+E L Q+ HPH++ L G C +D LL+ EY G+L L ++
Sbjct: 63 ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRK 122
Query: 179 STLPWLTR----------------------IKIAIGAARCLAFLHGEEKPVIYRDFKASN 216
+L I A ++ + +L E +++RD A N
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARN 180
Query: 217 ILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL-----TTMCDV 271
IL+ K+SDFGL+ D + EDS + ++G +++ L TT DV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYE-EDSXVKR----SQGRIPVKWMAIESLFDHIYTTQSDV 235
Query: 272 FSFGVVLLELLT 283
+SFGV+L E++T
Sbjct: 236 WSFGVLLWEIVT 247
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 33/278 (11%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQL 139
F++ + +G+G FG+V+KG +D+ + + VA+K++D+ ++ E + E+ L Q
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
P++ G +D ++ EY+ G+ D L T ++ + + L +
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDY 134
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT-TCVMGTEGYAAPE 258
LH E+K I+RD KA+N+LL KL+DFG+A Q D+ I +GT + APE
Sbjct: 135 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPE 189
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIID 318
I + D++S G+ +EL G + + L+ P
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------- 236
Query: 319 SRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
LE YS K L CL+ P RPT ++K
Sbjct: 237 PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 30/309 (9%)
Query: 60 SLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL- 118
S G + LKE+ N + LG G FG+VY+G V Q VAVK L
Sbjct: 20 SFAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLP 76
Query: 119 DVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--- 175
+V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 77 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 136
Query: 176 --NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDF 230
+ S+L L + +A A +L EE I+RD A N LL AK+ DF
Sbjct: 137 RPSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDF 194
Query: 231 GLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEK 290
G+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 195 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMP 252
Query: 291 NRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPT 350
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 253 YPSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPN 298
Query: 351 MTTVVKALE 359
+++ +E
Sbjct: 299 FAIILERIE 307
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 87 LGEGGFGKVYKGCVDDNLR-PGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHL 144
+G G G+V G LR PG + VA+K L ++ R ++L+E +GQ HP++
Sbjct: 57 IGSGDSGEVCYG----RLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ L G ++V EYM G+L D + + + + + G + +L +
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRYL--SD 169
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAAPEYIN 261
++RD A N+L+DS+ K+SDFGL+ D P + ++ TT + APE I
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP--DAAYTTTGGKIPIRWTAPEAIA 227
Query: 262 TGHLTTMCDVFSFGVVLLELLT 283
++ DV+SFGVV+ E+L
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLA 249
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 87 LGEGGFGKVYKGCVDDNLR-PGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHL 144
+G G G+V G LR PG + VA+K L ++ R ++L+E +GQ HP++
Sbjct: 57 IGSGDSGEVCYG----RLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ L G ++V EYM G+L D + + + + + G + +L +
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRYL--SD 169
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG-----YAAPEY 259
++RD A N+L+DS+ K+SDFGL+ D+ TT T G + APE
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT----TGGKIPIRWTAPEA 225
Query: 260 INTGHLTTMCDVFSFGVVLLELLT 283
I ++ DV+SFGVV+ E+L
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 28/277 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+G G FG V+ G L VA+K + G+ +++ E + +L HP LV
Sbjct: 18 IGSGQFGLVHLG-------YWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L G C E LV+E+M G L D L + T + + + +A+L EE
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAC 126
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
VI+RD A N L+ + K+SDFG+ T + +T +A+PE + +
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYS 326
+ DV+SFGV++ E+ + + +NR E +++D + ++ RL
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 231
Query: 327 TEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
+ + + + C P+ RP + +++ L + +
Sbjct: 232 --ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 30/309 (9%)
Query: 60 SLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL- 118
S G + LKE+ N + LG G FG+VY+G V Q VAVK L
Sbjct: 40 SFAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLP 96
Query: 119 DVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--- 175
+V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 97 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 156
Query: 176 --NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDF 230
+ S+L L + +A A +L EE I+RD A N LL AK+ DF
Sbjct: 157 RPSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDF 214
Query: 231 GLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEK 290
G+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 215 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMP 272
Query: 291 NRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPT 350
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 273 YPSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPN 318
Query: 351 MTTVVKALE 359
+++ +E
Sbjct: 319 FAIILERIE 327
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 94/217 (43%), Gaps = 16/217 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKG-CVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLG 137
HN LGEG FGKV+ C NL P VAVK L +++ E L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECY--NLCPEQDKILVAVKTLKDASDNARKDFHREAELLT 70
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK-----------NYSSTLPWLTR 186
L+H H+V G C E + ++V+EYM G+L+ L N + L
Sbjct: 71 NLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM 130
Query: 187 IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
+ IA A + +L + ++RD N L+ + K+ DFG++ D + +
Sbjct: 131 LHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
M + PE I TT DV+S GVVL E+ T
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 130/308 (42%), Gaps = 30/308 (9%)
Query: 61 LVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-D 119
G + LKE+ N + LG G FG+VY+G V Q VAVK L +
Sbjct: 29 FAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLPE 85
Query: 120 VNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK---- 175
V Q ++L E + + +L H ++V IG + R ++ E MA G+L L +
Sbjct: 86 VCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 145
Query: 176 -NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDFG 231
+ S+L L + +A A +L EE I+RD A N LL AK+ DFG
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 232 LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKN 291
+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 261
Query: 292 RCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 262 PSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPNF 307
Query: 352 TTVVKALE 359
+++ +E
Sbjct: 308 AIILERIE 315
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 33/278 (11%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQL 139
F++ + +G+G FG+V+KG +D+ + + VA+K++D+ ++ E + E+ L Q
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
P++ G +D ++ EY+ G+ D L T ++ + + L +
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDY 119
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT-TCVMGTEGYAAPE 258
LH E+K I+RD KA+N+LL KL+DFG+A Q D+ I +GT + APE
Sbjct: 120 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPE 174
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIID 318
I + D++S G+ +EL G + + L+ P
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------- 221
Query: 319 SRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
LE YS K L CL+ P RPT ++K
Sbjct: 222 PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 36/285 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHLV 145
+G G FG+V G + PG + VA+K L ++ R ++L+E +GQ HP+++
Sbjct: 41 IGAGEFGEVCSGHLK---LPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
+L G + +++ E+M G+L D + + + + G A + +L +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL--ADM 154
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINT 262
++RD A NIL++S+ K+SDFGL+ T +G + + APE I
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 263 GHLTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRL 321
T+ DV+S+G+V+ E+++ G R W D T D I + +
Sbjct: 215 RKFTSASDVWSYGIVMWEVMSYGERPY-------------W------DMTNQDVI--NAI 253
Query: 322 EDRYSTEGAKRLAAVAHQ----CLSHNPKSRPTMTTVVKALEPLL 362
E Y + HQ C + RP +V L+ ++
Sbjct: 254 EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 298
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 33/278 (11%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQL 139
F++ + +G+G FG+V+KG +D+ + + VA+K++D+ ++ E + E+ L Q
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
P++ G +D ++ EY+ G+ D L T ++ + + L +
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDY 119
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT-TCVMGTEGYAAPE 258
LH E+K I+RD KA+N+LL KL+DFG+A Q D+ I +GT + APE
Sbjct: 120 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPE 174
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIID 318
I + D++S G+ +EL G + + L+ P
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------- 221
Query: 319 SRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
LE YS K L CL+ P RPT ++K
Sbjct: 222 PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 78 THNFSRSDY-----LGEGGFGKVYKG-CVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
H+ R D LGEG FGKV+ C NL P VAVK L +++
Sbjct: 12 VHHIKRRDIVLKWELGEGAFGKVFLAEC--HNLLPEQDKMLVAVKALKEASESARQDFQR 69
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLT------ 185
E L L+H H+V G C E L+V+EYM G+L ++ +++ L
Sbjct: 70 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVA 128
Query: 186 --------RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGP 237
+ +A A + +L G ++RD N L+ K+ DFG++ D
Sbjct: 129 PGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 186
Query: 238 QGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + M + PE I TT DV+SFGVVL E+ T
Sbjct: 187 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 20/283 (7%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAE 132
+++ +F + LG G G V+K + +P +A K++ + R + + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKP--SGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 133 VIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIG 192
+ L + P++V G D + E+M G+L DQ+ K + +P K++I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKK-AGRIPEQILGKVSIA 112
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE 252
+ L +L E+ +++RD K SNIL++S KL DFG++ Q DS + V GT
Sbjct: 113 VIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFV-GTR 167
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
Y +PE + H + D++S G+ L+E+ GR + K E +RP + F
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK------EDSRPPMAIFEL 221
Query: 313 LDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVV 355
LD I++ S + ++CL NP R + ++
Sbjct: 222 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 264
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + +S L L I A + LA+L E
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASL--ILYAYQLSTALAYL--ES 129
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ + KL DFGL+ EDS G + APE IN
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+GEG FG V++G + P A VA+K S RE +L E + + Q HPH+V
Sbjct: 398 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
LIG E+ ++ E LG L L + +S L L I A + LA+L E
Sbjct: 455 KLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASL--ILYAYQLSTALAYL--ES 509
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINT 262
K ++RD A N+L+ + KL DFGL+ EDS G + APE IN
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSR---YMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 263 GHLTTMCDVFSFGVVLLELL 282
T+ DV+ FGV + E+L
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 78 THNFSRSDY-----LGEGGFGKVYKG-CVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
H+ R D LGEG FGKV+ C NL P VAVK L +++
Sbjct: 6 VHHIKRRDIVLKWELGEGAFGKVFLAEC--HNLLPEQDKMLVAVKALKEASESARQDFQR 63
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLT------ 185
E L L+H H+V G C E L+V+EYM G+L ++ +++ L
Sbjct: 64 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVA 122
Query: 186 --------RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGP 237
+ +A A + +L G ++RD N L+ K+ DFG++ D
Sbjct: 123 PGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 180
Query: 238 QGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + M + PE I TT DV+SFGVVL E+ T
Sbjct: 181 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 128/308 (41%), Gaps = 30/308 (9%)
Query: 61 LVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-D 119
G + LKE+ R LG G FG+VY+G V Q VAVK L +
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLPE 85
Query: 120 VNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK---- 175
V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 86 VYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 145
Query: 176 -NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDFG 231
+ S+L L + +A A +L EE I+RD A N LL AK+ DFG
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 232 LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKN 291
+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 261
Query: 292 RCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 262 PSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPNF 307
Query: 352 TTVVKALE 359
+++ +E
Sbjct: 308 AIILERIE 315
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 78 THNFSRSDY-----LGEGGFGKVYKG-CVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
H+ R D LGEG FGKV+ C NL P VAVK L +++
Sbjct: 35 VHHIKRRDIVLKWELGEGAFGKVFLAEC--HNLLPEQDKMLVAVKALKEASESARQDFQR 92
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTR----- 186
E L L+H H+V G C E L+V+EYM G+L ++ +++ L
Sbjct: 93 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVA 151
Query: 187 ---------IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGP 237
+ +A A + +L G ++RD N L+ K+ DFG++ D
Sbjct: 152 PGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 209
Query: 238 QGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + M + PE I TT DV+SFGVVL E+ T
Sbjct: 210 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 30/308 (9%)
Query: 61 LVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-D 119
G + LKE+ N + LG G FG+VY+G V Q VAVK L +
Sbjct: 6 FAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLPE 62
Query: 120 VNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK---- 175
V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 63 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 122
Query: 176 -NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILL---DSDYNAKLSDFG 231
+ S+L L + +A A +L EE I+RD A N LL AK+ DFG
Sbjct: 123 PSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 180
Query: 232 LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKN 291
+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 181 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 238
Query: 292 RCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 239 PSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPNF 284
Query: 352 TTVVKALE 359
+++ +E
Sbjct: 285 AIILERIE 292
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 30/308 (9%)
Query: 61 LVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-D 119
G + LKE+ N + LG G FG+VY+G V Q VAVK L +
Sbjct: 29 FAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLPE 85
Query: 120 VNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK---- 175
V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 86 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR 145
Query: 176 -NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDFG 231
+ S+L L + +A A +L EE I+RD A N LL AK+ DFG
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 232 LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKN 291
+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 261
Query: 292 RCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 262 PSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPNF 307
Query: 352 TTVVKALE 359
+++ +E
Sbjct: 308 AIILERIE 315
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 30/308 (9%)
Query: 61 LVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-D 119
G + LKE+ N + LG G FG+VY+G V Q VAVK L +
Sbjct: 14 FAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLPE 70
Query: 120 VNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK---- 175
V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 71 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 130
Query: 176 -NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDFG 231
+ S+L L + +A A +L EE I+RD A N LL AK+ DFG
Sbjct: 131 PSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 232 LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKN 291
+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 246
Query: 292 RCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 247 PSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPNF 292
Query: 352 TTVVKALE 359
+++ +E
Sbjct: 293 AIILERIE 300
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 30/308 (9%)
Query: 61 LVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-D 119
G + LKE+ N + LG G FG+VY+G V Q VAVK L +
Sbjct: 31 FAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLPE 87
Query: 120 VNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK---- 175
V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 88 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 147
Query: 176 -NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDFG 231
+ S+L L + +A A +L EE I+RD A N LL AK+ DFG
Sbjct: 148 PSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 205
Query: 232 LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKN 291
+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 206 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 263
Query: 292 RCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 264 PSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPNF 309
Query: 352 TTVVKALE 359
+++ +E
Sbjct: 310 AIILERIE 317
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 30/308 (9%)
Query: 61 LVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-D 119
G + LKE+ N + LG G FG+VY+G V Q VAVK L +
Sbjct: 14 FAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLPE 70
Query: 120 VNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK---- 175
V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 71 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR 130
Query: 176 -NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDFG 231
+ S+L L + +A A +L EE I+RD A N LL AK+ DFG
Sbjct: 131 PSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 232 LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKN 291
+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 246
Query: 292 RCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 247 PSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPNF 292
Query: 352 TTVVKALE 359
+++ +E
Sbjct: 293 AIILERIE 300
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 78 LYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
++RD +A+NIL+ + K++DFGLA E + + + APE G T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFT 193
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYS 326
DV+SFG++L EL T R RE LDQ+ E Y
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ERGYR 233
Query: 327 T----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
E + L + QC +P+ RPT + LE
Sbjct: 234 MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
R LG G FG VYKG + G + VA+K+L + G + + E++ E + +
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIW---VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMA 95
Query: 138 QLKHPHLVNLIGYCCEDEHRL----------LVYEYMALGNLHDQLFKNYSSTLPWLTRI 187
+ HPHLV L+G C +L L Y + N+ QL N+ +
Sbjct: 96 SMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--------V 147
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
+IA G ++ EE+ +++RD A N+L+ S + K++DFGLA E +
Sbjct: 148 QIAKG------MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 201
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ A E I+ T DV+S+GV + EL+T
Sbjct: 202 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 30/308 (9%)
Query: 61 LVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-D 119
G + LKE+ N + LG G FG+VY+G V Q VAVK L +
Sbjct: 55 FAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLPE 111
Query: 120 VNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK---- 175
V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 112 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 171
Query: 176 -NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLD---SDYNAKLSDFG 231
+ S+L L + +A A +L EE I+RD A N LL AK+ DFG
Sbjct: 172 PSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229
Query: 232 LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKN 291
+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 287
Query: 292 RCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 288 PSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPNF 333
Query: 352 TTVVKALE 359
+++ +E
Sbjct: 334 AIILERIE 341
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 30/308 (9%)
Query: 61 LVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-D 119
G + LKE+ N + LG G FG+VY+G V Q VAVK L +
Sbjct: 32 FAGKTSSISDLKEVP--RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ-VAVKTLPE 88
Query: 120 VNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK---- 175
V Q ++L E + + + H ++V IG + R ++ E MA G+L L +
Sbjct: 89 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 148
Query: 176 -NYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILL---DSDYNAKLSDFG 231
+ S+L L + +A A +L EE I+RD A N LL AK+ DFG
Sbjct: 149 PSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 206
Query: 232 LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKN 291
+A D + C M + PE G T+ D +SFGV+L E+ +
Sbjct: 207 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 264
Query: 292 RCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
K ++++E+ R++ + G + + QC H P+ RP
Sbjct: 265 PSKSNQEVLEFV------------TSGGRMDPPKNCPGP--VYRIMTQCWQHQPEDRPNF 310
Query: 352 TTVVKALE 359
+++ +E
Sbjct: 311 AIILERIE 318
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 87 LGEGGFGKVYKGCVDDNLRPG-LKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLV 145
LG+GG+GKV++ G + A V K + V ++ AE L ++KHP +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 146 NLIGYCCEDEHRL-LVYEYMALGNLHDQLFKN----YSSTLPWLTRIKIAIGAARCLAFL 200
+LI Y + +L L+ EY++ G L QL + + +L I +A+G
Sbjct: 85 DLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG-------- 135
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
H +K +IYRD K NI+L+ + KL+DFGL + D +T GT Y APE +
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH--DGTVTHTFCGTIEYMAPEIL 193
Query: 261 NTGHLTTMCDVFSFGVVLLELLTG 284
D +S G ++ ++LTG
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 28/277 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+G G FG V+ G L VA+K + G+ +++ E + +L HP LV
Sbjct: 16 IGSGQFGLVHLG-------YWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L G C E LV E+M G L D L + T + + + +A+L EE
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL--EEAC 124
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
VI+RD A N L+ + K+SDFG+ T + +T +A+PE + +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYS 326
+ DV+SFGV++ E+ + + +NR E +++D + ++ RL
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 229
Query: 327 TEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
+ + + + C P+ RP + +++ L + +
Sbjct: 230 --ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPG---LKAQTV----AVKVLDVNGSQGHREWLAEVIFLGQL 139
LG+G FGKV+ V RP L A V +KV D ++ R+ LA+V
Sbjct: 36 LGQGSFGKVF--LVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV------ 87
Query: 140 KHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
HP +V L Y + E +L L+ +++ G+L +L K T +K + A L
Sbjct: 88 NHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE---EDVKFYL-AELALG 142
Query: 199 FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
H +IYRD K NILLD + + KL+DFGL+ + E + C GT Y APE
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC--GTVEYMAPE 200
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTG 284
+N + D +S+GV++ E+LTG
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 12/201 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS-QGHREWLAEVIFLGQLKHPHLV 145
+G G FG+V G + PG + VA+K L + + R++L+E +GQ HP+++
Sbjct: 37 IGVGEFGEVCSGRLK---VPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
+L G + + +++ EYM G+L D + + + + G + +L +
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS--DM 150
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAAPEYINT 262
++RD A NIL++S+ K+SDFG++ D P E ++ T + APE I
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP--EAAYTTRGGKIPIRWTAPEAIAY 208
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
T+ DV+S+G+V+ E+++
Sbjct: 209 RKFTSASDVWSYGIVMWEVMS 229
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 121/280 (43%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 78 LYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTA-RQGAKFPIKWTAPEAALYG 190
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 230
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC +P+ RPT + LE
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 119/283 (42%), Gaps = 40/283 (14%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREW---LAEVIFLG 137
FS +G G FG VY R ++ VA+K + +G Q + +W + EV FL
Sbjct: 56 FSDLREIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L+HP+ + G + LV EY LG+ D L + + L + + GA + L
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASD-LLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGTEGYAA 256
A+LH +I+RD KA NILL KL DFG A+ P +GT + A
Sbjct: 168 AYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMA 218
Query: 257 PEYI---NTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKL 313
PE I + G DV+S G+ +EL +R+ L + + L
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIEL-----------AERKPPLFN-----MNAMSAL 262
Query: 314 DQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
I + S ++ CL P+ RPT ++K
Sbjct: 263 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 120/276 (43%), Gaps = 34/276 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 66
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 67 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 123
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTA-RQGAKFPIKWTAPEAALYG 179
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ ++
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQ-VERGYRM 223
Query: 324 RYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
E + L + QC +P+ RPT + LE
Sbjct: 224 PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 121/280 (43%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 245 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 301
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGL G ED+ T G + + APE G
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGL---GRLIEDNEYT-ARQGAKFPIKWTAPEAALYG 357
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 397
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC +P+ RPT + LE
Sbjct: 398 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 121/280 (43%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 68
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 69 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 125
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTA-RQGAKFPIKWTAPEAALYG 181
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 221
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC +P+ RPT + LE
Sbjct: 222 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 87 LGEGGFGKVYKGCVDDNLRPG-LKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLV 145
LG+GG+GKV++ G + A V K + V ++ AE L ++KHP +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 146 NLIGYCCEDEHRL-LVYEYMALGNLHDQLFKN----YSSTLPWLTRIKIAIGAARCLAFL 200
+LI Y + +L L+ EY++ G L QL + + +L I +A+G
Sbjct: 85 DLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG-------- 135
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
H +K +IYRD K NI+L+ + KL+DFGL + D +T GT Y APE +
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH--DGTVTHXFCGTIEYMAPEIL 193
Query: 261 NTGHLTTMCDVFSFGVVLLELLTG 284
D +S G ++ ++LTG
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 87 LGEGGFGKVYKGCVDDNLR---PGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPH 143
LG G FG+V+ N R + + + V++ V + R + L + HP
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDER------LMLSIVTHPF 67
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
++ + G + + ++ +Y+ G L L K+ P + A CLA +
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNP----VAKFYAAEVCLALEYLH 123
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTG 263
K +IYRD K NILLD + + K++DFG A P +T + GT Y APE ++T
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVSTK 178
Query: 264 HLTTMCDVFSFGVVLLELLTG 284
D +SFG+++ E+L G
Sbjct: 179 PYNKSIDWWSFGILIYEMLAG 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 121/280 (43%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEY-TARQGAKFPIKWTAPEAALYG 190
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 230
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC +P+ RPT + LE
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
R LG G FG VYKG + G + VA+K+L + G + + E++ E + +
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIW---VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMA 72
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK---NYSSTLPWLTRIKIAIGAA 194
+ HPHLV L+G C +L V + M G L + + + N S L ++IA G
Sbjct: 73 SMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG-- 129
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
++ EE+ +++RD A N+L+ S + K++DFGLA E + +
Sbjct: 130 ----MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLT 283
A E I+ T DV+S+GV + EL+T
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 120/276 (43%), Gaps = 34/276 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 78 LYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTA-RQGAKFPIKWTAPEAALYG 190
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ ++
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQ-VERGYRM 234
Query: 324 RYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
E + L + QC +P+ RPT + LE
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 116/273 (42%), Gaps = 28/273 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 67
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 68 LYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 124
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
++RD +A+NIL+ + K++DFGLA E + + + APE G T
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFT 183
Query: 267 TMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYS 326
DV+SFG++L EL T R RE LDQ ++
Sbjct: 184 IKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQ-VERGYRMPCP 227
Query: 327 TEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
E + L + QC P+ RPT + LE
Sbjct: 228 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 12/201 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS-QGHREWLAEVIFLGQLKHPHLV 145
+G G FG+V G + PG + VA+K L + + R++L+E +GQ HP+++
Sbjct: 22 IGVGEFGEVCSGRLK---VPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
+L G + + +++ EYM G+L D + + + + G + +L +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL--SDM 135
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAAPEYINT 262
++RD A NIL++S+ K+SDFG++ D P E ++ T + APE I
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP--EAAYTTRGGKIPIRWTAPEAIAY 193
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
T+ DV+S+G+V+ E+++
Sbjct: 194 RKFTSASDVWSYGIVMWEVMS 214
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 118/282 (41%), Gaps = 38/282 (13%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREW---LAEVIFLG 137
FS +G G FG VY R ++ VA+K + +G Q + +W + EV FL
Sbjct: 17 FSDLREIGHGSFGAVYFA------RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L+HP+ + G + LV EY LG+ D L + + L + + GA + L
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASD-LLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
A+LH +I+RD KA NILL KL DFG A+ +GT + AP
Sbjct: 129 AYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAP 180
Query: 258 EYI---NTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLD 314
E I + G DV+S G+ +EL +R+ L + + L
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIEL-----------AERKPPLFN-----MNAMSALY 224
Query: 315 QIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
I + S ++ CL P+ RPT ++K
Sbjct: 225 HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 120/280 (42%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 244 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 300
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEY-TARQGAKFPIKWTAPEAALYG 356
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 396
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC P+ RPT + LE
Sbjct: 397 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLA------RERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S+ K++DFG + P S T
Sbjct: 122 ------ANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAP----SSRRTT 169
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ GT Y PE I D++S GV+ E L G E + + +
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HN R T+ V++
Sbjct: 230 PDFV---------------TEGARDLIS---RLLKHNASQRLTLAEVLE 260
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 120/280 (42%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 244 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 300
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEY-TARQGAKFPIKWTAPEAALYG 356
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 396
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC P+ RPT + LE
Sbjct: 397 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 108/224 (48%), Gaps = 13/224 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLV 145
LG G FG V +G R K VA+KVL + E + E + QL +P++V
Sbjct: 18 LGCGNFGSVRQGV----YRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
LIG C+ E +LV E G LH L +P ++ + + +L EEK
Sbjct: 74 RLIG-VCQAEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYL--EEK 129
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTG 263
++RD A N+LL + + AK+SDFGL + +DS+ T G + APE IN
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGL-SKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 264 HLTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVEWARPM 306
++ DV+S+GV + E L+ G++ +K + +E + M
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 232
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 120/280 (42%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 327 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 383
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEY-TARQGAKFPIKWTAPEAALYG 439
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 479
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC P+ RPT + LE
Sbjct: 480 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 12/201 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS-QGHREWLAEVIFLGQLKHPHLV 145
+G G FG+V G + PG + VA+K L + + R++L+E +GQ HP+++
Sbjct: 16 IGVGEFGEVCSGRLK---VPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
+L G + + +++ EYM G+L D + + + + G + +L +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL--SDM 129
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAAPEYINT 262
++RD A NIL++S+ K+SDFG++ D P E ++ T + APE I
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP--EAAYTTRGGKIPIRWTAPEAIAY 187
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
T+ DV+S+G+V+ E+++
Sbjct: 188 RKFTSASDVWSYGIVMWEVMS 208
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG+V+ G + N + VA+K L G+ +L E + +LKH LV
Sbjct: 17 LGNGQFGEVWMGTWNGNTK-------VAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM G+L D L L + +A A +A++ E
Sbjct: 69 LYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI--ERMN 125
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
I+RD +++NIL+ + K++DFGLA E + + + APE G T
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFT 184
Query: 267 TMCDVFSFGVVLLELLTGRR 286
DV+SFG++L EL+T R
Sbjct: 185 IKSDVWSFGILLTELVTKGR 204
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 121/280 (43%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +++H LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQ 77
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEY-TARQGAKFPIKWTAPEAALYG 190
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 230
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC +P+ RPT + LE
Sbjct: 231 GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 119/276 (43%), Gaps = 34/276 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 70
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 71 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 127
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTA-RQGAKFPIKWTAPEAALYG 183
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ ++
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQ-VERGYRM 227
Query: 324 RYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
E + L + QC P+ RPT + LE
Sbjct: 228 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 119/276 (43%), Gaps = 34/276 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G L D L L + +A A +A++ E
Sbjct: 78 LYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTA-RQGAKFPIKWTAPEAALYG 190
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ ++
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQ-VERGYRM 234
Query: 324 RYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
E + L + QC +P+ RPT + LE
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 84 SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDV--NGSQGHREWLAEVIFLGQLKH 141
S +G G FG VYKG + VAVK+L V + + + EV L + +H
Sbjct: 41 STRIGSGSFGTVYKGKWHGD---------VAVKILKVVDPTPEQFQAFRNEVAVLRKTRH 91
Query: 142 PHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
+++ +GY +D + +V ++ +L+ L + I IA A+ + +LH
Sbjct: 92 VNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLH 149
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI- 260
K +I+RD K++NI L K+ DFGLAT + S G+ + APE I
Sbjct: 150 A--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 261 --NTGHLTTMCDVFSFGVVLLELLTG 284
+ + DV+S+G+VL EL+TG
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 123/282 (43%), Gaps = 38/282 (13%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIFL 136
+F + LG+G F VY+ +++ GL+ VA+K++D G + + EV
Sbjct: 12 DFKVGNLLGKGSFAGVYRA---ESIHTGLE---VAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL---FKNYSSTLPWLTRIKIAIGA 193
QLKHP ++ L Y + + LV E G ++ L K +S +I G
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG- 124
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
+ +LH +++RD SN+LL + N K++DFGLAT + H T C GT
Sbjct: 125 ---MLYLHSH--GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPN 177
Query: 254 YAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKL 313
Y +PE DV+S G + LL GR + + K + V A + F +
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSI 237
Query: 314 DQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVV 355
+ AK L HQ L NP R ++++V+
Sbjct: 238 E---------------AKDL---IHQLLRRNPADRLSLSSVL 261
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 119/276 (43%), Gaps = 34/276 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLAR---LIEDNEYTA-RQGAKFPIKWTAPEAALYG 190
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ ++
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQ-VERGYRM 234
Query: 324 RYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
E + L + QC +P+ RPT + LE
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 120/280 (42%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G+L D L L + +A A +A++ E
Sbjct: 244 LYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV--ERMN 300
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEY-TARQGAKFPIKWTAPEAALYG 356
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 396
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC P+ RPT + LE
Sbjct: 397 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 119/276 (43%), Gaps = 34/276 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM+ G L D L L + +A A +A++ E
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV--ERMN 134
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTA-RQGAKFPIKWTAPEAALYG 190
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ ++
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQ-VERGYRM 234
Query: 324 RYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
E + L + QC +P+ RPT + LE
Sbjct: 235 PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 36/285 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHLV 145
+G G FG+V G + PG + VA+K L ++ R ++L+E +GQ HP+++
Sbjct: 15 IGAGEFGEVCSGHLK---LPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
+L G + +++ E+M G+L D + + + + G A + +L +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL--ADM 128
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINT 262
++R A NIL++S+ K+SDFGL+ T +G + + APE I
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 263 GHLTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRL 321
T+ DV+S+G+V+ E+++ G R W D T D I + +
Sbjct: 189 RKFTSASDVWSYGIVMWEVMSYGERPY-------------W------DMTNQDVI--NAI 227
Query: 322 EDRYSTEGAKRLAAVAHQ----CLSHNPKSRPTMTTVVKALEPLL 362
E Y + HQ C + RP +V L+ ++
Sbjct: 228 EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 10/218 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLGQLKHPHL 144
LG G FG V+KG + G + V +KV+ D +G Q + ++ +G L H H+
Sbjct: 39 LGSGVFGTVHKGVW---IPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
V L+G C +L V +Y+ LG+L D + ++ + P L + + A+ + +L EE
Sbjct: 96 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLL-LNWGVQIAKGMYYL--EE 151
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGH 264
+++R+ A N+LL S +++DFG+A P + + + + A E I+ G
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 265 LTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVE 301
T DV+S+GV + EL+T G R DL+E
Sbjct: 212 YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 249
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 87 LGEGGFGKVYKG-CVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLV 145
LGEG FGKV+ C NL P VAVK L +++ E L L+H H+V
Sbjct: 23 LGEGAFGKVFLAECY--NLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLH--------------DQLFKNYSSTLPWLTRIKIAI 191
G C + + ++V+EYM G+L+ D + L + IA
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
A + +L + ++RD N L+ ++ K+ DFG++ D + + M
Sbjct: 141 QIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ PE I TT DV+SFGV+L E+ T
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 10/218 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLGQLKHPHL 144
LG G FG V+KG + G + V +KV+ D +G Q + ++ +G L H H+
Sbjct: 21 LGSGVFGTVHKGVW---IPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
V L+G C +L V +Y+ LG+L D + ++ + P L + + A+ + +L EE
Sbjct: 78 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLL-LNWGVQIAKGMYYL--EE 133
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGH 264
+++R+ A N+LL S +++DFG+A P + + + + A E I+ G
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 265 LTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVE 301
T DV+S+GV + EL+T G R DL+E
Sbjct: 194 YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 231
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 118/289 (40%), Gaps = 43/289 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLA 131
Q +F LG+G FG VY R +A+KVL + + +
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLA------RERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK----NYSSTLPWLTRI 187
EV L+HP+++ L GY + L+ EY LG ++ +L K + T ++T +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
A L++ H K VI+RD K N+LL S+ K++DFG + P T C
Sbjct: 122 ------ANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD--TLC 171
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
GT Y PE I D++S GV+ E L G E + + +
Sbjct: 172 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
DF TEGA+ L + + L HN R T+ V++
Sbjct: 230 PDFV---------------TEGARDLIS---RLLKHNASQRLTLAEVLE 260
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 135/314 (42%), Gaps = 34/314 (10%)
Query: 55 NELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVA 114
+L S+L+ V E +++TH+ +G+G FG VY G D + ++ A
Sbjct: 1 RDLDSALLAEVKDVLIPHE-RVVTHS---DRVIGKGHFGVVYHGEYIDQAQNRIQC---A 53
Query: 115 VKVLD-VNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDE---HRLLVYEYMALGNLH 170
+K L + Q +L E + + L HP+++ LIG E H LL YM G+L
Sbjct: 54 IKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL--PYMCHGDLL 111
Query: 171 DQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDF 230
Q ++ I + AR + +L E+ ++RD A N +LD + K++DF
Sbjct: 112 -QFIRSPQRNPTVKDLISFGLQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADF 168
Query: 231 GLATDGPQGEDSHITTCVMGT--EGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSV 288
GLA D E + + A E + T TT DV+SFGV+L ELLT R
Sbjct: 169 GLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT--RGA 226
Query: 289 EKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
R DL + L +L Q Y + L V QC +P R
Sbjct: 227 PPYRHIDPFDLTHF----LAQGRRLPQ-------PEYCPDS---LYQVMQQCWEADPAVR 272
Query: 349 PTMTTVVKALEPLL 362
PT +V +E ++
Sbjct: 273 PTFRVLVGEVEQIV 286
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 22/229 (9%)
Query: 71 LKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG--HRE 128
LKE+ + F LGE FGKVYKG + PG + Q VA+K L + ++G E
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPA-PGEQTQAVAIKTLK-DKAEGPLREE 75
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF-------------- 174
+ E + +L+HP++V L+G +D+ +++ Y + G+LH+ L
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 135
Query: 175 KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
+ S L + + A + +L V+++D N+L+ N K+SD GL
Sbjct: 136 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + + + + APE I G + D++S+GVVL E+ +
Sbjct: 194 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 13/224 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQLKHPHLV 145
LG G FG V +G R K VA+KVL + E + E + QL +P++V
Sbjct: 344 LGCGNFGSVRQGVY----RMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
LIG C+ E +LV E G LH L +P ++ + + +L EEK
Sbjct: 400 RLIG-VCQAEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYL--EEK 455
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTG 263
++R+ A N+LL + + AK+SDFGL + +DS+ T G + APE IN
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGL-SKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 264 HLTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVEWARPM 306
++ DV+S+GV + E L+ G++ +K + +E + M
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 558
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 22/229 (9%)
Query: 71 LKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG--HRE 128
LKE+ + F LGE FGKVYKG + PG + Q VA+K L + ++G E
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLF-GPAPGEQTQAVAIKTLK-DKAEGPLREE 58
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF-------------- 174
+ E + +L+HP++V L+G +D+ +++ Y + G+LH+ L
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 175 KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
+ S L + + A + +L V+++D N+L+ N K+SD GL
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + + + + APE I G + D++S+GVVL E+ +
Sbjct: 177 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVLD---VNGSQGHREWLAEVIFLGQLKHP 142
LGEG FGKV L K Q VA+K + + S H E+ +L L+HP
Sbjct: 17 LGEGSFGKV-------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
H++ L ++V EY A G L D + + T R I A + + H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCHR 126
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAAPEY 259
+ +++RD K N+LLD + N K++DFGL+ TDG + T+C G+ YAAPE
Sbjct: 127 HK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG----NFLKTSC--GSPNYAAPEV 178
Query: 260 INTGHLTT--MCDVFSFGVVLLELLTGR 285
IN G L DV+S G+VL +L GR
Sbjct: 179 IN-GKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 119/280 (42%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM G+L D L L + ++ A +A++ E
Sbjct: 75 LYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV--ERMN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEY-TARQGAKFPIKWTAPEAALYG 187
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 227
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC P+ RPT + LE
Sbjct: 228 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 96/212 (45%), Gaps = 33/212 (15%)
Query: 85 DYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL--------DVNGSQGHREWLAEVIFL 136
D LG G FGKV G + L VAVK+L DV G + E+ L
Sbjct: 22 DTLGVGTFGKVKVG------KHELTGHKVAVKILNRQKIRSLDVVG-----KIRREIQNL 70
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRI--KIAIGAA 194
+HPH++ L +V EY++ G L D + KN R+ +I G
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD 130
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
C + V++RD K N+LLD+ NAK++DFGL+ GE G+ Y
Sbjct: 131 YCHRHM------VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNY 181
Query: 255 AAPEYINTGHLTT--MCDVFSFGVVLLELLTG 284
AAPE I +G L D++S GV+L LL G
Sbjct: 182 AAPEVI-SGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL-KHP 142
LGEG FG+V + D +P + VAVK+L + ++ + ++E+ + + KH
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--------------FKNYSSTLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L N L +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A AR + +L K I+RD A N+L+ D K++DFGLA D + TT
Sbjct: 155 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV+L E+ T S VE +LK
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLK 266
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + L + C P RPT +V+ L+ ++ L
Sbjct: 267 EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 119/280 (42%), Gaps = 42/280 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG+V+ G + R VA+K L G+ +L E + +L+H LV
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L E E +V EYM G+L D L L + ++ A +A++ E
Sbjct: 75 LYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV--ERMN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEYINTG 263
++RD +A+NIL+ + K++DFGLA ED+ T G + + APE G
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEW-TARQGAKFPIKWTAPEAALYG 187
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
T DV+SFG++L EL T R RE LDQ+ E
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---------------VLDQV-----ER 227
Query: 324 RYST----EGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
Y E + L + QC P+ RPT + LE
Sbjct: 228 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 21/209 (10%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK 140
++R + +G+G G VY ++ G Q VA++ +++ + E++ + + K
Sbjct: 22 YTRFEKIGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA-- 198
+P++VN + + +V EY+A G+L D + T + +IA CL
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQAL 129
Query: 199 -FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGL-ATDGPQGEDSHITTCVMGTEGYAA 256
FLH + VI+RD K+ NILL D + KL+DFG A P E S +T V GT + A
Sbjct: 130 EFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMA 184
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTGR 285
PE + D++S G++ +E++ G
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 17 LGKGNFGSV-EMCRYDPLQDNT-GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 130
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 48/242 (19%)
Query: 64 SNLHVFTLKELQMITHNFSRSDY------LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV 117
NL+ ++K+ + +T + + D+ LG+G FGKVYK N + A A KV
Sbjct: 16 ENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---QNKETSVLA---AAKV 69
Query: 118 LDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNY 177
+D + +++ E+ L HP++V L+ + + ++ E+ A G + + +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 178 SSTLPWLTRIKIAIGAAR---CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA- 233
LT +I + + L +LH + +I+RD KA NIL D + KL+DFG++
Sbjct: 130 RP----LTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVSA 183
Query: 234 --TDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMC------------DVFSFGVVLL 279
T Q DS I GT + APE + MC DV+S G+ L+
Sbjct: 184 KNTRTIQRRDSFI-----GTPYWMAPEVV-------MCETSKDRPYDYKADVWSLGITLI 231
Query: 280 EL 281
E+
Sbjct: 232 EM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 48/242 (19%)
Query: 64 SNLHVFTLKELQMITHNFSRSDY------LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV 117
NL+ ++K+ + +T + + D+ LG+G FGKVYK N + A A KV
Sbjct: 16 ENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---QNKETSVLA---AAKV 69
Query: 118 LDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNY 177
+D + +++ E+ L HP++V L+ + + ++ E+ A G + + +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 178 SSTLPWLTRIKIAIGAAR---CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA- 233
LT +I + + L +LH + +I+RD KA NIL D + KL+DFG++
Sbjct: 130 RP----LTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVSA 183
Query: 234 --TDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMC------------DVFSFGVVLL 279
T Q DS I GT + APE + MC DV+S G+ L+
Sbjct: 184 KNTRXIQRRDSFI-----GTPYWMAPEVV-------MCETSKDRPYDYKADVWSLGITLI 231
Query: 280 EL 281
E+
Sbjct: 232 EM 233
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 68
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 124
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 238
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 239 -----------LALLHKILVENPSARITIPDIKK 261
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 22 LGKGNFGSV-EMCRYDPLQDN-TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 135
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNT-GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 131
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNT-GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 134
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 16 LGKGNFGSV-EMCRYDPLQDNT-GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 129
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNT-GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 131
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDN-TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 149
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 23 LGKGNFGSV-EMCRYDPLQDNT-GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 136
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 49 LGKGNFGSV-EMCRYDPLQDN-TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 162
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 25 LGKGNFGSV-EMCRYDPLQDNT-GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 138
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 24 LGKGNFGSV-EMCRYDPLQDNT-GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 137
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNR------VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 124
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 238
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 239 -----------LALLHKILVENPSARITIPDIKK 261
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 119/284 (41%), Gaps = 37/284 (13%)
Query: 80 NFSRSDYLGEGGFGKVYKG-CVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ 138
NF +G G F +VY+ C+ D + LK V++ D+ ++ + + E+ L Q
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKK----VQIFDLMDAKARADCIKEIDLLKQ 88
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--FKNYSSTLPWLTRIKIAIGAARC 196
L HP+++ ED +V E G+L + FK +P T K + C
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL--C 146
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
A H + V++RD K +N+ + + KL D GL + ++GT Y +
Sbjct: 147 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMS 204
Query: 257 PEYINTGHLTTMCDVFSFGVVLLEL------LTGRRSVEKNRCKREKDLVEWARPMLKDF 310
PE I+ D++S G +L E+ G + + CK+ + D+
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC---------DY 255
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTV 354
L D YS E L + + C++ +P+ RP +T V
Sbjct: 256 PPLP-------SDHYSEE----LRQLVNMCINPDPEKRPDVTYV 288
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAVNR------VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDN-TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 149
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL-KHP 142
LGEG FG+V + D +P + VAVK+L + ++ + ++E+ + + KH
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 79
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--------------FKNYSSTLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L N L +
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A AR + +L K I+RD A N+L+ D K++DFGLA D + TT
Sbjct: 140 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV+L E+ T S VE +LK
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLK 251
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + L + C P RPT +V+ L+ ++ L
Sbjct: 252 EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 144/326 (44%), Gaps = 53/326 (16%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
K++QM+ +G+G +G+V+ G + + VAVKV + W
Sbjct: 37 KQIQMVKQ-------IGKGRYGEVWMG--------KWRGEKVAVKVF---FTTEEASWFR 78
Query: 132 EVIFLGQLKHPHLVNLIGYCCED-------EHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
E + H N++G+ D L+ +Y G+L+D L S+TL
Sbjct: 79 ETEIYQTVLMRH-ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAK 134
Query: 185 TRIKIAIGAARCLAFLHGE-----EKPVI-YRDFKASNILLDSDYNAKLSDFGLATD--G 236
+ +K+A + L LH E KP I +RD K+ NIL+ + ++D GLA
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194
Query: 237 PQGEDSHITTCVMGTEGYAAPEY----INTGHLTT--MCDVFSFGVVLLELLTGRRSVEK 290
E +GT+ Y PE +N H + M D++SFG++L E+ RR V
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSG 252
Query: 291 NRCKREK----DLVEWARPMLKDFTKLDQIIDSR--LEDRYST-EGAKRLAAVAHQCLSH 343
+ + DLV + P +D ++ I R +R+S+ E +++ + +C +H
Sbjct: 253 GIVEEYQLPYHDLVP-SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAH 311
Query: 344 NPKSRPTMTTVVKALEPLLDLNDIPI 369
NP SR T V K L + + DI +
Sbjct: 312 NPASRLTALRVKKTLAKMSESQDIKL 337
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL-KHP 142
LGEG FG+V + D +P + VAVK+L + ++ + ++E+ + + KH
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 86
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--------------FKNYSSTLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L N L +
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A AR + +L K I+RD A N+L+ D K++DFGLA D + TT
Sbjct: 147 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV+L E+ T S VE +LK
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLK 258
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + L + C P RPT +V+ L+ ++ L
Sbjct: 259 EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 304
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL-KHP 142
LGEG FG+V + D +P + VAVK+L + ++ + ++E+ + + KH
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 87
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--------------FKNYSSTLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L N L +
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A AR + +L K I+RD A N+L+ D K++DFGLA D + TT
Sbjct: 148 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV+L E+ T S VE +LK
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLK 259
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + L + C P RPT +V+ L+ ++ L
Sbjct: 260 EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 305
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL-KHP 142
LGEG FG+V + D +P + VAVK+L + ++ + ++E+ + + KH
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 83
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--------------FKNYSSTLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L N L +
Sbjct: 84 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A AR + +L K I+RD A N+L+ D K++DFGLA D + TT
Sbjct: 144 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV+L E+ T S VE +LK
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLK 255
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + L + C P RPT +V+ L+ ++ L
Sbjct: 256 EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 301
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 16/229 (6%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQ 138
+F R LG G G V K RP +A K++ + R + + E+ L +
Sbjct: 17 DFERISELGAGNGGVVTK----VQHRP--SGLIMARKLIHLEIKPAIRNQIIRELQVLHE 70
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
P++V G D + E+M G+L DQ+ K + +P K++I R LA
Sbjct: 71 CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKE-AKRIPEEILGKVSIAVLRGLA 128
Query: 199 FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
+L E+ +++RD K SNIL++S KL DFG++ Q DS + +GT Y APE
Sbjct: 129 YLR-EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDS-MANSFVGTRSYMAPE 183
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPML 307
+ H + D++S G+ L+EL GR + K + + + RP++
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI--FGRPVV 230
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNR------VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 124
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 238
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 239 -----------LALLHKILVENPSARITIPDIKK 261
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNR------VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 124
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 238
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 239 -----------LALLHKILVENPSARITIPDIKK 261
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAVNR------VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 124
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 238
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 239 -----------LALLHKILVENPSARITIPDIKK 261
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 13 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 122
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 236
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 237 -----------LALLHKILVENPSARITIPDIKK 259
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL-KHP 142
LGEG FG+V + D +P + VAVK+L + ++ + ++E+ + + KH
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--------------FKNYSSTLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L N L +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A AR + +L K I+RD A N+L+ D K++DFGLA D + TT
Sbjct: 155 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV+L E+ T S VE +LK
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLK 266
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + L + C P RPT +V+ L+ ++ L
Sbjct: 267 EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 124
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 238
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 239 -----------LALLHKILVENPSARITIPDIKK 261
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 124
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 238
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 239 -----------LALLHKILVENPSARITIPDIKK 261
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQLKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + E+ L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVV 68
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 124
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 238
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 239 -----------LALLHKILVENPSARITIPDIKK 261
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL-KHP 142
LGEG FG+V + D +P + VAVK+L + ++ + ++E+ + + KH
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--------------FKNYSSTLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L N L +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A AR + +L K I+RD A N+L+ D K++DFGLA D + TT
Sbjct: 155 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV+L E+ T S VE +LK
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLK 266
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + L + C P RPT +V+ L+ ++ L
Sbjct: 267 EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDN-TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 131
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG---YAAPEYI 260
K I+RD NIL++++ K+ DFGL PQ D E + APE +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ--DKEFFKVKEPGESPIFWYAPESL 189
Query: 261 NTGHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDN-TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
G C R L+ EY+ G+L D L + ++ + + ++ + + +L
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQICKGMEYLGT-- 135
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINTG 263
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 264 HLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL-KHP 142
LGEG FG+V + D +P + VAVK+L + ++ + ++E+ + + KH
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--------------FKNYSSTLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L N L +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A AR + +L K I+RD A N+L+ D K++DFGLA D + TT
Sbjct: 155 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV+L E+ T S VE +LK
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLK 266
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + L + C P RPT +V+ L+ ++ L
Sbjct: 267 EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLG 137
N+ +G+G F KV R L + VAVK++D S ++ EV +
Sbjct: 8 NYRLLKTIGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 61
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
L HP++V L ++ LV EY + G + D L + W+ K A R +
Sbjct: 62 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-----GWMKE-KEARAKFRQI 115
Query: 198 --AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
A + +K +++RD KA N+LLD+D N K++DFG + + G + T C G+ YA
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFC--GSPPYA 172
Query: 256 APE-YINTGHLTTMCDVFSFGVVLLELLTG 284
APE + + DV+S GV+L L++G
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL-KHP 142
LGEG FG+V + D +P + VAVK+L + ++ + ++E+ + + KH
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPN-RVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK 135
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--------------FKNYSSTLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L N L +
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A AR + +L K I+RD A N+L+ D K++DFGLA D + TT
Sbjct: 196 CAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV+L E+ T S VE +LK
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLK 307
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + L + C P RPT +V+ L+ ++ L
Sbjct: 308 EGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 56 ELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAV 115
++++S GS L + + I + +G+G FG+V++G + + VAV
Sbjct: 22 DMTTSGSGSGLPLLVQR---TIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAV 70
Query: 116 KVLDVNGSQGHREWL--AEVIFLGQLKHPHLVNLIGYCCEDE----HRLLVYEYMALGNL 169
K+ S+ R W AE+ L+H +++ I +D LV +Y G+L
Sbjct: 71 KIF---SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL 127
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE-----EKPVI-YRDFKASNILLDSDY 223
D L Y+ T+ + IK+A+ A LA LH E KP I +RD K+ NIL+ +
Sbjct: 128 FDYL-NRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 184
Query: 224 NAKLSDFGLATDGPQGEDS--HITTCVMGTEGYAAPEY----INTGHLTTM--CDVFSFG 275
++D GLA D+ +GT+ Y APE IN H + D+++ G
Sbjct: 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 244
Query: 276 VVLLELLTGRR----SVEKNRCKREKDLVEWARPMLKDFTKL--DQIIDSRLEDRY-STE 328
+V E+ RR + ++ DLV + P +++ K+ +Q + + +R+ S E
Sbjct: 245 LVFWEI--ARRCSIGGIHEDYQLPYYDLVP-SDPSVEEMRKVVCEQKLRPNIPNRWQSCE 301
Query: 329 GAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ +A + +C N +R T + K L L
Sbjct: 302 ALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK 140
++R + +G+G G VY ++ G Q VA++ +++ + E++ + + K
Sbjct: 22 YTRFEKIGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA-- 198
+P++VN + + +V EY+A G+L D + T + +IA CL
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQAL 129
Query: 199 -FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
FLH + VI+RD K+ NILL D + KL+DFG + + ++GT + AP
Sbjct: 130 EFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAP 185
Query: 258 EYINTGHLTTMCDVFSFGVVLLELLTGR 285
E + D++S G++ +E++ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 56 ELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAV 115
++++S GS L + + I + +G+G FG+V++G + + VAV
Sbjct: 9 DMTTSGSGSGLPLLVQR---TIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAV 57
Query: 116 KVLDVNGSQGHREWL--AEVIFLGQLKHPHLVNLIGYCCEDE----HRLLVYEYMALGNL 169
K+ S+ R W AE+ L+H +++ I +D LV +Y G+L
Sbjct: 58 KIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL 114
Query: 170 HDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE-----EKPVI-YRDFKASNILLDSDY 223
D L Y+ T+ + IK+A+ A LA LH E KP I +RD K+ NIL+ +
Sbjct: 115 FDYL-NRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 171
Query: 224 NAKLSDFGLATDGPQGEDS--HITTCVMGTEGYAAPEY----INTGHLTTM--CDVFSFG 275
++D GLA D+ +GT+ Y APE IN H + D+++ G
Sbjct: 172 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 231
Query: 276 VVLLELLTGRR----SVEKNRCKREKDLVEWARPMLKDFTKL--DQIIDSRLEDRY-STE 328
+V E+ RR + ++ DLV + P +++ K+ +Q + + +R+ S E
Sbjct: 232 LVFWEI--ARRCSIGGIHEDYQLPYYDLVP-SDPSVEEMRKVVCEQKLRPNIPNRWQSCE 288
Query: 329 GAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
+ +A + +C N +R T + K L L
Sbjct: 289 ALRVMAKIMRECWYANGAARLTALRIKKTLSQL 321
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK 140
++R + +G+G G VY ++ G Q VA++ +++ + E++ + + K
Sbjct: 23 YTRFEKIGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA-- 198
+P++VN + + +V EY+A G+L D + T + +IA CL
Sbjct: 77 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQAL 130
Query: 199 -FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
FLH + VI+RD K+ NILL D + KL+DFG + + ++GT + AP
Sbjct: 131 EFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAP 186
Query: 258 EYINTGHLTTMCDVFSFGVVLLELLTGR 285
E + D++S G++ +E++ G
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 48/242 (19%)
Query: 64 SNLHVFTLKELQMITHNFSRSDY------LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV 117
NL+ ++K+ + +T + + D+ LG+G FGKVYK N + A A KV
Sbjct: 16 ENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---QNKETSVLA---AAKV 69
Query: 118 LDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNY 177
+D + +++ E+ L HP++V L+ + + ++ E+ A G + + +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 178 SSTLPWLTRIKIAIGAAR---CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA- 233
LT +I + + L +LH + +I+RD KA NIL D + KL+DFG++
Sbjct: 130 RP----LTESQIQVVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVSA 183
Query: 234 --TDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMC------------DVFSFGVVLL 279
T Q D I GT + APE + MC DV+S G+ L+
Sbjct: 184 KNTRXIQRRDXFI-----GTPYWMAPEVV-------MCETSKDRPYDYKADVWSLGITLI 231
Query: 280 EL 281
E+
Sbjct: 232 EM 233
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E++++ +L D + + + +P + L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
AF H V++RD K N+L++++ KL+DFGLA ++ V T Y AP
Sbjct: 120 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 258 E-YINTGHLTTMCDVFSFGVVLLELLTGR 285
E + + +T D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FG V +G D P K +VAVK L ++ + +++ EV + L H +
Sbjct: 20 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
L+ L G ++ V E LG+L D+L K+ L T + A+ A + +L E
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL--E 132
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE-GYAAPEYINT 262
K I+RD A N+LL + K+ DFGL PQ +D ++ + APE + T
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSRL 321
+ D + FGV L E+ T + P + + +++ ID
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQE-----------------PWIGLNGSQILHKIDKEG 235
Query: 322 EDRYSTEGAKR-LAAVAHQCLSHNPKSRPTMTTV 354
E E + + V QC +H P+ RPT +
Sbjct: 236 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 21/209 (10%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK 140
++R + +G+G G VY ++ G Q VA++ +++ + E++ + + K
Sbjct: 23 YTRFEKIGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA-- 198
+P++VN + + +V EY+A G+L D + T + +IA CL
Sbjct: 77 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQAL 130
Query: 199 -FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGL-ATDGPQGEDSHITTCVMGTEGYAA 256
FLH + VI+R+ K+ NILL D + KL+DFG A P E S +T V GT + A
Sbjct: 131 EFLHSNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMA 185
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTGR 285
PE + D++S G++ +E++ G
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 73 ELQMITHNFSRSDYLGEGGFGKVYKGCVDD-NLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
++++ +F LG+G FGKV+ N +KA V ++D + E
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVE--K 69
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL--HDQLFKNYSSTLPWLTRIKI 189
V+ L +HP L ++ E+ V EY+ G+L H Q + + +I
Sbjct: 70 RVLSLA-WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 128
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
+G L FLH K ++YRD K NILLD D + K++DFG+ + G+ C
Sbjct: 129 ILG----LQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC-- 180
Query: 250 GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
GT Y APE + D +SFGV+L E+L G+
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 6 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E++++ +L D + + + +P + L
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
AF H V++RD K N+L++++ KL+DFGLA ++ V T Y AP
Sbjct: 119 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 258 E-YINTGHLTTMCDVFSFGVVLLELLTGR 285
E + + +T D++S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 35/305 (11%)
Query: 63 GSNLHVFTLKELQMITH-NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN 121
G LH K+ ++ H + + +G G FG+V+ G L+A V V
Sbjct: 97 GVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSG--------RLRADNTLVAVKSCR 148
Query: 122 GS---QGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS 178
+ ++L E L Q HP++V LIG C + + +V E + G+ +
Sbjct: 149 ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT-FLRTEG 207
Query: 179 STLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQ 238
+ L T +++ AA + +L E K I+RD A N L+ K+SDFG++ +
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYL--ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
Query: 239 GEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE-K 297
G + + APE +N G ++ DV+SFG++L E + S N ++ +
Sbjct: 266 GVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR 325
Query: 298 DLVEWARPMLKDFTKLDQIIDSRLE-DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
+ VE RL + RL QC ++ P RP+ +T+ +
Sbjct: 326 EFVE---------------KGGRLPCPELCPDAVFRL---MEQCWAYEPGQRPSFSTIYQ 367
Query: 357 ALEPL 361
L+ +
Sbjct: 368 ELQSI 372
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK 140
++R + +G+G G VY ++ G Q VA++ +++ + E++ + + K
Sbjct: 22 YTRFEKIGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA-- 198
+P++VN + + +V EY+A G+L D + T + +IA CL
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQAL 129
Query: 199 -FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGL-ATDGPQGEDSHITTCVMGTEGYAA 256
FLH + VI+RD K+ NILL D + KL+DFG A P E S + V GT + A
Sbjct: 130 EFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSEMV-GTPYWMA 184
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTGR 285
PE + D++S G++ +E++ G
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 30/277 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQ 138
+F + LG G G V+K + +P +A K++ + R + + E+ L +
Sbjct: 10 DFEKISELGAGNGGVVFK----VSHKP--SGLVMARKLIHLEIKPAIRNQIIRELQVLHE 63
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
P++V G D + E+M G+L DQ+ K + +P K++I + L
Sbjct: 64 CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKK-AGRIPEQILGKVSIAVIKGLT 121
Query: 199 FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
+L E+ +++RD K SNIL++S KL DFG++ Q D V GT Y +PE
Sbjct: 122 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDEMANEFV-GTRSYMSPE 176
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIID 318
+ H + D++S G+ L+E+ GR + RP + F LD I++
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGR----------------YPRPPMAIFELLDYIVN 220
Query: 319 SRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVV 355
S + ++CL NP R + ++
Sbjct: 221 EPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM 257
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 19 LGKGNFGSV-EMCRYDPLQDNT-GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ EY+ G+L D L K+ + IK+ ++ C +
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG 132
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH-ITTCVMGTEGYAAPEYINT 262
K I+R+ NIL++++ K+ DFGL PQ ++ + + + APE +
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FG V +G D P K +VAVK L ++ + +++ EV + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
L+ L G ++ V E LG+L D+L K+ L T + A+ A + +L E
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL--E 128
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE-GYAAPEYINT 262
K I+RD A N+LL + K+ DFGL PQ +D ++ + APE + T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSRL 321
+ D + FGV L E+ T + P + + +++ ID
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE-----------------PWIGLNGSQILHKIDKEG 231
Query: 322 EDRYSTEGAKR-LAAVAHQCLSHNPKSRPTMTTV 354
E E + + V QC +H P+ RPT +
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FG V +G D P K +VAVK L ++ + +++ EV + L H +
Sbjct: 26 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
L+ L G ++ V E LG+L D+L K+ L T + A+ A + +L E
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL--E 138
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE-GYAAPEYINT 262
K I+RD A N+LL + K+ DFGL PQ +D ++ + APE + T
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSRL 321
+ D + FGV L E+ T + P + + +++ ID
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQE-----------------PWIGLNGSQILHKIDKEG 241
Query: 322 EDRYSTEGAKR-LAAVAHQCLSHNPKSRPTMTTV 354
E E + + V QC +H P+ RPT +
Sbjct: 242 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 40/303 (13%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQ 138
+F + LG G G V+K + GL +A K++ + R + + E+ L +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPS---GL---VMARKLIHLEIKPAIRNQIIRELQVLHE 122
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
P++V G D + E+M G+L DQ+ K + +P K++I + L
Sbjct: 123 CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKK-AGRIPEQILGKVSIAVIKGLT 180
Query: 199 FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
+L E+ +++RD K SNIL++S KL DFG++ Q DS + V GT Y +PE
Sbjct: 181 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFV-GTRSYMSPE 235
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR---------CKREKDLVEW------- 302
+ H + D++S G+ L+E+ GR + C+ E D E
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 295
Query: 303 ----------ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMT 352
+RP + F LD I++ S + ++CL NP R +
Sbjct: 296 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLK 355
Query: 353 TVV 355
++
Sbjct: 356 QLM 358
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 126/301 (41%), Gaps = 47/301 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQLKHPHL- 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H HL
Sbjct: 37 LGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH-HLN 94
Query: 145 -VNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPWLTR------------IKIA 190
VNL+G C + L+V E+ GNL L + +P+ I +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 155 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEWAR 304
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR--------- 263
Query: 305 PMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 264 --LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 365 N 365
N
Sbjct: 312 N 312
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 40/309 (12%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAE 132
+++ +F + LG G G V+K + +P +A K++ + R + + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKP--SGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 133 VIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIG 192
+ L + P++V G D + E+M G+L DQ+ K + +P K++I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKK-AGRIPEQILGKVSIA 112
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE 252
+ L +L E+ +++RD K SNIL++S KL DFG++ Q DS + V GT
Sbjct: 113 VIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFV-GTR 167
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR---------CKREKDLVEW- 302
Y +PE + H + D++S G+ L+E+ GR + C+ E D E
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 303 ----------------ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPK 346
+RP + F LD I++ S + ++CL NP
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 347 SRPTMTTVV 355
R + ++
Sbjct: 288 ERADLKQLM 296
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FG V +G D P K +VAVK L ++ + +++ EV + L H +
Sbjct: 20 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
L+ L G ++ V E LG+L D+L K+ L T + A+ A + +L E
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL--E 132
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE-GYAAPEYINT 262
K I+RD A N+LL + K+ DFGL PQ +D ++ + APE + T
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSRL 321
+ D + FGV L E+ T + P + + +++ ID
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQE-----------------PWIGLNGSQILHKIDKEG 235
Query: 322 EDRYSTEGAKR-LAAVAHQCLSHNPKSRPTMTTV 354
E E + + V QC +H P+ RPT +
Sbjct: 236 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FG V +G D P K +VAVK L ++ + +++ EV + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
L+ L G ++ V E LG+L D+L K+ L T + A+ A + +L E
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL--E 128
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE-GYAAPEYINT 262
K I+RD A N+LL + K+ DFGL PQ +D ++ + APE + T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSRL 321
+ D + FGV L E+ T + P + + +++ ID
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE-----------------PWIGLNGSQILHKIDKEG 231
Query: 322 EDRYSTEGAKR-LAAVAHQCLSHNPKSRPTMTTV 354
E E + + V QC +H P+ RPT +
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 28/234 (11%)
Query: 63 GSNLH----VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL 118
G +LH +F + + + LG+G FG+V C D + Q AVKV+
Sbjct: 30 GDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVIL-CKDK-----ITGQECAVKVI 83
Query: 119 ---DVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF- 174
V L EV L QL HP+++ L + + + LV E G L D++
Sbjct: 84 SKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 143
Query: 175 -KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDF 230
K +S + +I + ++H + +++RD K N+LL+S D N ++ DF
Sbjct: 144 RKRFSE----VDAARIIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDF 197
Query: 231 GLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GL+T E S +GT Y APE ++ G CDV+S GV+L LL+G
Sbjct: 198 GLST---HFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L YS + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 273
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 274 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 28/234 (11%)
Query: 63 GSNLH----VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL 118
G +LH +F + + + LG+G FG+V C D + Q AVKV+
Sbjct: 29 GDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVIL-CKDK-----ITGQECAVKVI 82
Query: 119 ---DVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF- 174
V L EV L QL HP+++ L + + + LV E G L D++
Sbjct: 83 SKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 142
Query: 175 -KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDF 230
K +S + +I + ++H + +++RD K N+LL+S D N ++ DF
Sbjct: 143 RKRFSE----VDAARIIRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDF 196
Query: 231 GLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GL+T E S +GT Y APE ++ G CDV+S GV+L LL+G
Sbjct: 197 GLST---HFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 40/309 (12%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAE 132
+++ +F + LG G G V+K + +P +A K++ + R + + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKP--SGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 133 VIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIG 192
+ L + P++V G D + E+M G+L DQ+ K + +P K++I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKK-AGRIPEQILGKVSIA 112
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE 252
+ L +L E+ +++RD K SNIL++S KL DFG++ Q DS + V GT
Sbjct: 113 VIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFV-GTR 167
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR---------CKREKDLVEW- 302
Y +PE + H + D++S G+ L+E+ GR + C+ E D E
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 303 ----------------ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPK 346
+RP + F LD I++ S + ++CL NP
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 347 SRPTMTTVV 355
R + ++
Sbjct: 288 ERADLKQLM 296
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 127/302 (42%), Gaps = 48/302 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQLKHPHL- 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H HL
Sbjct: 36 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-HLN 93
Query: 145 -VNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPWLTR-------------IKI 189
VNL+G C + L+V E+ GNL L + +P+ T I
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
+ A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 154 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 250 GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEWA 303
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 263
Query: 304 RPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 264 ---LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 364 LN 365
N
Sbjct: 311 AN 312
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKHPHL 144
+G GGF KV C L + VA+K++D N GS R E+ L L+H H+
Sbjct: 18 IGTGGFAKVKLAC------HILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHI 70
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
L +V EY G L D + + + I +A +A++H +
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSA--VAYVHSQ- 127
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN-TG 263
+RD K N+L D + KL DFGL +D H+ TC G+ YAAPE I
Sbjct: 128 -GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPELIQGKS 185
Query: 264 HLTTMCDVFSFGVVLLELLTG 284
+L + DV+S G++L L+ G
Sbjct: 186 YLGSEADVWSMGILLYVLMCG 206
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 16/258 (6%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+GEG G V C+ G + VAVK +D+ Q EV+ + H ++V+
Sbjct: 53 IGEGSTGIV---CIATEKHTG---KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+ + +V E++ G L D + + T + + R L++LH +
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRALSYLHNQG-- 161
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
VI+RD K+ +ILL SD KLSDFG ++ ++GT + APE I+
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQ--VSKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 267 TMCDVFSFGVVLLELLTGRRS-VEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRY 325
T D++S G++++E++ G + + + + + P +KD K+ ++ L+
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLML 279
Query: 326 STEGAKRLAAVAHQCLSH 343
E ++R A A + L H
Sbjct: 280 VREPSQR--ATAQELLGH 295
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 73 ELQMITHNFSRSDYLGEGGFGKVYKGCVDD-NLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
++++ +F LG+G FGKV+ N +KA V ++D + E
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVE--K 68
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL--HDQLFKNYSSTLPWLTRIKI 189
V+ L +HP L ++ E+ V EY+ G+L H Q + + +I
Sbjct: 69 RVLSLA-WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 127
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
+G L FLH K ++YRD K NILLD D + K++DFG+ + G+ C
Sbjct: 128 ILG----LQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC-- 179
Query: 250 GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
GT Y APE + D +SFGV+L E+L G+
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 44/302 (14%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL--AEVIFLGQLKHPHL 144
+G+G FG+V++G + + VAVK+ S+ R W AE+ L+H ++
Sbjct: 12 IGKGRFGEVWRG--------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENI 60
Query: 145 VNLIGYCCEDE----HRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
+ I +D LV +Y G+L D L + Y+ T+ + IK+A+ A LA L
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGM--IKLALSTASGLAHL 117
Query: 201 HGE-----EKPVI-YRDFKASNILLDSDYNAKLSDFGLATDGPQGEDS--HITTCVMGTE 252
H E KP I +RD K+ NIL+ + ++D GLA D+ +GT+
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 177
Query: 253 GYAAPEY----INTGHLTTM--CDVFSFGVVLLELLTGRR----SVEKNRCKREKDLVEW 302
Y APE IN H + D+++ G+V E+ RR + ++ DLV
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDLVP- 234
Query: 303 ARPMLKDFTKL--DQIIDSRLEDRY-STEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
+ P +++ K+ +Q + + +R+ S E + +A + +C N +R T + K L
Sbjct: 235 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 294
Query: 360 PL 361
L
Sbjct: 295 QL 296
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 87 LGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP 142
LG G FG V +KG D VAVK++ GS E+ E + +L HP
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----------VAVKMIK-EGSMSEDEFFQEAQTMMKLSHP 63
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
LV G C ++ +V EY++ G L + L +++ L +++ +AFL
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFL-- 120
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEY 259
E I+RD A N L+D D K+SDFG+ +D ++++ +GT+ ++APE
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL--DDQYVSS--VGTKFPVKWSAPEV 176
Query: 260 INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDS 319
+ ++ DV++FG+++ E+ + K DL + +LK ++ ++
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFS--------LGKMPYDLYTNSEVVLK-VSQGHRLYRP 227
Query: 320 RLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
L + + + + C P+ RPT ++ ++EPL
Sbjct: 228 HL-------ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 35/305 (11%)
Query: 63 GSNLHVFTLKELQMITH-NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN 121
G LH K+ ++ H + + +G G FG+V+ G L+A V V
Sbjct: 97 GVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSG--------RLRADNTLVAVKSCR 148
Query: 122 GS---QGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS 178
+ ++L E L Q HP++V LIG C + + +V E + G+ +
Sbjct: 149 ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT-FLRTEG 207
Query: 179 STLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQ 238
+ L T +++ AA + +L E K I+RD A N L+ K+SDFG++ +
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYL--ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
Query: 239 GEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE-K 297
G + + APE +N G ++ DV+SFG++L E + S N ++ +
Sbjct: 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR 325
Query: 298 DLVEWARPMLKDFTKLDQIIDSRLE-DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
+ VE RL + RL QC ++ P RP+ +T+ +
Sbjct: 326 EFVE---------------KGGRLPCPELCPDAVFRL---MEQCWAYEPGQRPSFSTIYQ 367
Query: 357 ALEPL 361
L+ +
Sbjct: 368 ELQSI 372
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 136/310 (43%), Gaps = 60/310 (19%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+G+G +G+V++G ++VAVK+ S+ + W E + H N
Sbjct: 16 VGKGRYGEVWRGL--------WHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRH-DN 63
Query: 147 LIGYCCED-------EHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
++G+ D L+ Y G+L+D L + TL +++A+ AA LA
Sbjct: 64 ILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ---TLEPHLALRLAVSAACGLAH 120
Query: 200 LHGE-----EKPVI-YRDFKASNILLDSDYNAKLSDFGLATDGPQGED--SHITTCVMGT 251
LH E KP I +RDFK+ N+L+ S+ ++D GLA QG D +GT
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 252 EGYAAPEYINTGHLTTMC-------DVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWAR 304
+ Y APE ++ + T C D+++FG+VL E+ RR++ +VE R
Sbjct: 181 KRYMAPEVLDE-QIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNG-------IVEDYR 230
Query: 305 PMLKDFTKLDQIIDSRLE----DRYSTEGAKRLAA---------VAHQCLSHNPKSRPTM 351
P D D + + D+ + RLAA + +C NP +R T
Sbjct: 231 PPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTA 290
Query: 352 TTVVKALEPL 361
+ K L+ +
Sbjct: 291 LRIKKTLQKI 300
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 40/309 (12%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAE 132
+++ +F + LG G G V+K + +P +A K++ + R + + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKP--SGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 133 VIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIG 192
+ L + P++V G D + E+M G+L DQ+ K + +P K++I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKK-AGRIPEQILGKVSIA 112
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE 252
+ L +L E+ +++RD K SNIL++S KL DFG++ Q DS + V GT
Sbjct: 113 VIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFV-GTR 167
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR---------CKREKDLVEW- 302
Y +PE + H + D++S G+ L+E+ GR + C+ E D E
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 303 ----------------ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPK 346
+RP + F LD I++ S + ++CL NP
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 347 SRPTMTTVV 355
R + ++
Sbjct: 288 ERADLKQLM 296
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 40/309 (12%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAE 132
+++ +F + LG G G V+K + +P +A K++ + R + + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKP--SGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 133 VIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIG 192
+ L + P++V G D + E+M G+L DQ+ K + +P K++I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKK-AGRIPEQILGKVSIA 112
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE 252
+ L +L E+ +++RD K SNIL++S KL DFG++ Q DS + V GT
Sbjct: 113 VIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFV-GTR 167
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR---------CKREKDLVEW- 302
Y +PE + H + D++S G+ L+E+ GR + C+ E D E
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 303 ----------------ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPK 346
+RP + F LD I++ S + ++CL NP
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 347 SRPTMTTVV 355
R + ++
Sbjct: 288 ERADLKQLM 296
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 44/302 (14%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL--AEVIFLGQLKHPHL 144
+G+G FG+V++G + + VAVK+ S+ R W AE+ L+H ++
Sbjct: 11 IGKGRFGEVWRG--------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENI 59
Query: 145 VNLIGYCCEDE----HRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
+ I +D LV +Y G+L D L Y+ T+ + IK+A+ A LA L
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGM--IKLALSTASGLAHL 116
Query: 201 HGE-----EKPVI-YRDFKASNILLDSDYNAKLSDFGLATDGPQGEDS--HITTCVMGTE 252
H E KP I +RD K+ NIL+ + ++D GLA D+ +GT+
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 253 GYAAPEY----INTGHLTTM--CDVFSFGVVLLELLTGRR----SVEKNRCKREKDLVEW 302
Y APE IN H + D+++ G+V E+ RR + ++ DLV
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDLVP- 233
Query: 303 ARPMLKDFTKL--DQIIDSRLEDRY-STEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
+ P +++ K+ +Q + + +R+ S E + +A + +C N +R T + K L
Sbjct: 234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293
Query: 360 PL 361
L
Sbjct: 294 QL 295
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V KG ++ +K V + + N E LAE + QL +P++V
Sbjct: 35 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+IG CE E +LV E LG L+ L +N + I + + + EE
Sbjct: 93 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVK----DKNIIELVHQVSMGMKYLEESN 147
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTGH 264
++RD A N+LL + + AK+SDFGL + + ++++ G + APE IN
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 265 LTTMCDVFSFGVVLLELLT 283
++ DV+SFGV++ E +
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V KG ++ +K V + + N E LAE + QL +P++V
Sbjct: 35 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+IG CE E +LV E LG L+ L +N + I + + + EE
Sbjct: 93 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVK----DKNIIELVHQVSMGMKYLEESN 147
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTGH 264
++RD A N+LL + + AK+SDFGL + + ++++ G + APE IN
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 265 LTTMCDVFSFGVVLLELLT 283
++ DV+SFGV++ E +
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V KG ++ +K V + + N E LAE + QL +P++V
Sbjct: 33 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+IG CE E +LV E LG L+ L +N + I + + + EE
Sbjct: 91 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVK----DKNIIELVHQVSMGMKYLEESN 145
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTGH 264
++RD A N+LL + + AK+SDFGL + + ++++ G + APE IN
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 265 LTTMCDVFSFGVVLLELLT 283
++ DV+SFGV++ E +
Sbjct: 205 FSSKSDVWSFGVLMWEAFS 223
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 44/302 (14%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL--AEVIFLGQLKHPHL 144
+G+G FG+V++G + + VAVK+ S+ R W AE+ L+H ++
Sbjct: 17 IGKGRFGEVWRG--------KWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENI 65
Query: 145 VNLIGYCCEDE----HRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
+ I +D LV +Y G+L D L Y+ T+ + IK+A+ A LA L
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGM--IKLALSTASGLAHL 122
Query: 201 HGE-----EKPVI-YRDFKASNILLDSDYNAKLSDFGLATDGPQGEDS--HITTCVMGTE 252
H E KP I +RD K+ NIL+ + ++D GLA D+ +GT+
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 182
Query: 253 GYAAPEY----INTGHLTTM--CDVFSFGVVLLELLTGRR----SVEKNRCKREKDLVEW 302
Y APE IN H + D+++ G+V E+ RR + ++ DLV
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDLVP- 239
Query: 303 ARPMLKDFTKL--DQIIDSRLEDRY-STEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
+ P +++ K+ +Q + + +R+ S E + +A + +C N +R T + K L
Sbjct: 240 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 299
Query: 360 PL 361
L
Sbjct: 300 QL 301
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLG 137
N+ +G+G F KV R L + VAVK++D S ++ EV +
Sbjct: 15 NYRLLKTIGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-- 195
L HP++V L ++ LV EY + G + D L + R+K A+
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 120
Query: 196 --CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
A + +K +++RD KA N+LLD+D N K++DFG + + G + T C G+
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFC--GSPP 177
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTG 284
YAAPE + + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 44/302 (14%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL--AEVIFLGQLKHPHL 144
+G+G FG+V++G + + VAVK+ S+ R W AE+ L+H ++
Sbjct: 14 IGKGRFGEVWRG--------KWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENI 62
Query: 145 VNLIGYCCEDE----HRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
+ I +D LV +Y G+L D L Y+ T+ + IK+A+ A LA L
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGM--IKLALSTASGLAHL 119
Query: 201 HGE-----EKPVI-YRDFKASNILLDSDYNAKLSDFGLATDGPQGEDS--HITTCVMGTE 252
H E KP I +RD K+ NIL+ + ++D GLA D+ +GT+
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 179
Query: 253 GYAAPEY----INTGHLTTM--CDVFSFGVVLLELLTGRR----SVEKNRCKREKDLVEW 302
Y APE IN H + D+++ G+V E+ RR + ++ DLV
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDLVP- 236
Query: 303 ARPMLKDFTKL--DQIIDSRLEDRY-STEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
+ P +++ K+ +Q + + +R+ S E + +A + +C N +R T + K L
Sbjct: 237 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 296
Query: 360 PL 361
L
Sbjct: 297 QL 298
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 129/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNY--------------SSTLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 273
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 274 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLG 137
N+ +G+G F KV R L + VAVK++D S ++ EV +
Sbjct: 15 NYRLLKTIGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-- 195
L HP++V L ++ LV EY + G + D L + R+K A+
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 120
Query: 196 --CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
A + +K +++RD KA N+LLD+D N K++DFG + + G + T C G+
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFC--GSPP 177
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTG 284
YAAPE + + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V KG ++ +K V + + N E LAE + QL +P++V
Sbjct: 377 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+IG CE E +LV E LG L+ L +N + I++ + + +L EE
Sbjct: 435 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSMGMKYL--EESN 489
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTGH 264
++RD A N+LL + + AK+SDFGL + + ++++ G + APE IN
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 265 LTTMCDVFSFGVVLLELLT 283
++ DV+SFGV++ E +
Sbjct: 549 FSSKSDVWSFGVLMWEAFS 567
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FG+V C D + Q AVKV+ V L EV L QL HP+
Sbjct: 34 LGKGSFGEVIL-CKD-----KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLF--KNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L + + + LV E G L D++ K +S + +I + ++H
Sbjct: 88 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE----VDAARIIRQVLSGITYMH 143
Query: 202 GEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
+ +++RD K N+LL+S D N ++ DFGL+T E S +GT Y APE
Sbjct: 144 --KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST---HFEASKKMKDKIGTAYYIAPE 198
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTG 284
++ G CDV+S GV+L LL+G
Sbjct: 199 VLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V KG ++ +K V + + N E LAE + QL +P++V
Sbjct: 378 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+IG CE E +LV E LG L+ L +N + I++ + + +L EE
Sbjct: 436 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSMGMKYL--EESN 490
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTGH 264
++RD A N+LL + + AK+SDFGL + + ++++ G + APE IN
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 265 LTTMCDVFSFGVVLLELLT 283
++ DV+SFGV++ E +
Sbjct: 550 FSSKSDVWSFGVLMWEAFS 568
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FG V +G D P K +VAVK L ++ + +++ EV + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
L+ L G ++ V E LG+L D+L K+ L T + A+ A + +L E
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL--E 128
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE-GYAAPEYINT 262
K I+RD A N+LL + K+ DFGL PQ +D + + APE + T
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSRL 321
+ D + FGV L E+ T + P + + +++ ID
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE-----------------PWIGLNGSQILHKIDKEG 231
Query: 322 EDRYSTEGAKR-LAAVAHQCLSHNPKSRPTMTTV 354
E E + + V QC +H P+ RPT +
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAAGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEK--NRCKREKDLVEWARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ + C+ D E + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 110
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 34/289 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR--EWLAEVIFLGQLKHPHL 144
LGEG FG V +G + LK VAVK + ++ S E+L+E + HP++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLK---VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 145 VNLIGYCCEDEHR-----LLVYEYMALGNLHDQLFKNYSST----LPWLTRIKIAIGAAR 195
+ L+G C E + +++ +M G+LH L + T +P T +K + A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
+ +L + ++RD A N +L D ++DFGL+ G+ +
Sbjct: 159 GMEYLSN--RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQ 315
A E + T+ DV++FGV + E+ T + P +++ D
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMT---------------PYPGVQNHEMYDY 261
Query: 316 IIDS-RLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
++ RL + + L + + C +P RPT + + LE LL+
Sbjct: 262 LLHGHRL--KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V KG ++ +K V + + N E LAE + QL +P++V
Sbjct: 25 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+IG CE E +LV E LG L+ L +N + I + + + EE
Sbjct: 83 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVK----DKNIIELVHQVSMGMKYLEESN 137
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTGH 264
++RD A N+LL + + AK+SDFGL + + ++++ G + APE IN
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 265 LTTMCDVFSFGVVLLELLT 283
++ DV+SFGV++ E +
Sbjct: 197 FSSKSDVWSFGVLMWEAFS 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FG V + C D L+ + VAVK L + + R++ E+ L L+H ++V
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNT-GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 147 LIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-CLAFLHGE 203
G C R L+ E++ G+L + L K+ + IK+ ++ C +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER----IDHIKLLQYTSQICKGMEYLG 134
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQG-EDSHITTCVMGTEGYAAPEYINT 262
K I+RD NIL++++ K+ DFGL PQ E + + APE +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 263 GHLTTMCDVFSFGVVLLELLT 283
+ DV+SFGVVL EL T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FG+V C D + Q AVKV+ V L EV L QL HP+
Sbjct: 40 LGKGSFGEVIL-CKDK-----ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLF--KNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L + + + LV E G L D++ K +S + +I + ++H
Sbjct: 94 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE----VDAARIIRQVLSGITYMH 149
Query: 202 GEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
+ +++RD K N+LL+S D N ++ DFGL+T E S +GT Y APE
Sbjct: 150 --KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST---HFEASKKMKDKIGTAYYIAPE 204
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTG 284
++ G CDV+S GV+L LL+G
Sbjct: 205 VLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
++ D LG G FGKV G L VAVK+L+ R+ + + +G++
Sbjct: 12 HYVLGDTLGVGTFGKVKIG------EHQLTGHKVAVKILN-------RQKIRSLDVVGKI 58
Query: 140 K----------HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
K HPH++ L +V EY++ G L D + K+ R+
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 118
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
I +A H V++RD K N+LLD+ NAK++DFGL+ GE T+C
Sbjct: 119 QILSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR-TSC-- 171
Query: 250 GTEGYAAPEYINTGHLTT--MCDVFSFGVVLLELLTG 284
G+ YAAPE I +G L D++S GV+L LL G
Sbjct: 172 GSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 30/274 (10%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FG V +G D P K +VAVK L ++ + +++ EV + L H +
Sbjct: 26 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
L+ L G ++ V E LG+L D+L K+ L T + A+ A + +L E
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYL--E 138
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE-GYAAPEYINT 262
K I+RD A N+LL + K+ DFGL PQ +D + + APE + T
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK-DFTKLDQIIDSRL 321
+ D + FGV L E+ T + P + + +++ ID
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQE-----------------PWIGLNGSQILHKIDKEG 241
Query: 322 EDRYSTEGAKR-LAAVAHQCLSHNPKSRPTMTTV 354
E E + + V QC +H P+ RPT +
Sbjct: 242 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 8 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 114
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 115 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 170
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V KG ++ +K V + + N E LAE + QL +P++V
Sbjct: 15 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+IG CE E +LV E LG L+ L +N + I + + + EE
Sbjct: 73 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVK----DKNIIELVHQVSMGMKYLEESN 127
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTGH 264
++RD A N+LL + + AK+SDFGL + + ++++ G + APE IN
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 265 LTTMCDVFSFGVVLLELLT 283
++ DV+SFGV++ E +
Sbjct: 187 FSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V KG ++ +K V + + N E LAE + QL +P++V
Sbjct: 19 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+IG CE E +LV E LG L+ L +N + I + + + EE
Sbjct: 77 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVK----DKNIIELVHQVSMGMKYLEESN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTGH 264
++RD A N+LL + + AK+SDFGL + + ++++ G + APE IN
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 265 LTTMCDVFSFGVVLLELLT 283
++ DV+SFGV++ E +
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V KG ++ +K V + + N E LAE + QL +P++V
Sbjct: 13 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+IG CE E +LV E LG L+ L +N + I + + + EE
Sbjct: 71 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVK----DKNIIELVHQVSMGMKYLEESN 125
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE--GYAAPEYINTGH 264
++RD A N+LL + + AK+SDFGL + + ++++ G + APE IN
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGL-SKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 265 LTTMCDVFSFGVVLLELLT 283
++ DV+SFGV++ E +
Sbjct: 185 FSSKSDVWSFGVLMWEAFS 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 11 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 117
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 118 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 110
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 109
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 110 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V KG ++ +K V + + N E LAE + QL +P++V
Sbjct: 19 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+IG CE E +LV E LG L+ L +N + I + + + EE
Sbjct: 77 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVK----DKNIIELVHQVSMGMKYLEESN 131
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH-ITTCVMGTEGYAAPEYINTGHL 265
++RD A N+LL + + AK+SDFGL+ E+ + T + APE IN
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 266 TTMCDVFSFGVVLLELLT 283
++ DV+SFGV++ E +
Sbjct: 192 SSKSDVWSFGVLMWEAFS 209
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 110
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 111
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 169
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 109
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 167
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 120/301 (39%), Gaps = 44/301 (14%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLG 137
+N LG G FGKV + L VAVK+L +E L +E+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 138 QL-KHPHLVNLIGYCCEDEHRLLVYEYMALGNL------------HDQLFKNYSSTLPWL 184
L +H ++VNL+G C L++ EY G+L D F +STL
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTR 164
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
+ + A+ +AFL K I+RD A N+LL + + AK+ DFGLA D + +
Sbjct: 165 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKD 298
+ APE I T DV+S+G++L E+ + + V K KD
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 282
Query: 299 LVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
+ A+P K + ++ C + P RPT + L
Sbjct: 283 GYQMAQPAF---------------------APKNIYSIMQACWALEPTHRPTFQQICSFL 321
Query: 359 E 359
+
Sbjct: 322 Q 322
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 110
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWL 130
+ + ++FS +G GGFG+VY GC R + A+K LD + QG L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVY-GC-----RKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 131 AEVIFLGQLKH---PHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTR 186
E I L + P +V + Y +L + + M G+LH L S +
Sbjct: 238 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSE 291
Query: 187 IKIAIGAARC-LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ AA L H + V+YRD K +NILLD + ++SD GLA D + + H +
Sbjct: 292 ADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS 350
Query: 246 TCVMGTEGYAAPEYINTG-HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDL 299
+GT GY APE + G + D FS G +L +LL G +++ K + ++
Sbjct: 351 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWL 130
+ + ++FS +G GGFG+VY GC R + A+K LD + QG L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVY-GC-----RKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 131 AEVIFLGQLKH---PHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTR 186
E I L + P +V + Y +L + + M G+LH L S +
Sbjct: 238 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSE 291
Query: 187 IKIAIGAARC-LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ AA L H + V+YRD K +NILLD + ++SD GLA D + + H +
Sbjct: 292 ADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS 350
Query: 246 TCVMGTEGYAAPEYINTG-HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDL 299
+GT GY APE + G + D FS G +L +LL G +++ K + ++
Sbjct: 351 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWL 130
+ + ++FS +G GGFG+VY GC R + A+K LD + QG L
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVY-GC-----RKADTGKMYAMKCLDKKRIKMKQGETLAL 236
Query: 131 AEVIFLGQLKH---PHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTR 186
E I L + P +V + Y +L + + M G+LH L S +
Sbjct: 237 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSE 290
Query: 187 IKIAIGAARC-LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ AA L H + V+YRD K +NILLD + ++SD GLA D + + H +
Sbjct: 291 ADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS 349
Query: 246 TCVMGTEGYAAPEYINTG-HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDL 299
+GT GY APE + G + D FS G +L +LL G +++ K + ++
Sbjct: 350 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWL 130
+ + ++FS +G GGFG+VY GC R + A+K LD + QG L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVY-GC-----RKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 131 AEVIFLGQLKH---PHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTR 186
E I L + P +V + Y +L + + M G+LH L S +
Sbjct: 238 NERIMLSLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSE 291
Query: 187 IKIAIGAARC-LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ AA L H + V+YRD K +NILLD + ++SD GLA D + + H +
Sbjct: 292 ADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS 350
Query: 246 TCVMGTEGYAAPEYINTG-HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDL 299
+GT GY APE + G + D FS G +L +LL G +++ K + ++
Sbjct: 351 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 126/298 (42%), Gaps = 43/298 (14%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQL-KHPHL 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H ++
Sbjct: 35 LGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 145 VNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPWLTRIK----------IAIGA 193
VNL+G C + L+V E+ GNL L + +P+ K +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 154 AKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 254 YAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEWARPML 307
+ APE I T DV+SFGV+L E+ + S +++ C+R L
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-----------L 260
Query: 308 KDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLN 365
K+ T++ R D + E + + C P RPT + +V+ L LL N
Sbjct: 261 KEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLLQAN 308
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 11 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 117
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 118 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLG 137
N+ +G+G F KV R L + VAV+++D S ++ EV +
Sbjct: 15 NYRLLKTIGKGNFAKVKLA------RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK 68
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-- 195
L HP++V L ++ LV EY + G + D L + R+K A+
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 120
Query: 196 --CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
A + +K +++RD KA N+LLD+D N K++DFG + + G + T C G+
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDTFC--GSPP 177
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTG 284
YAAPE + + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L YS + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 273
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 274 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 31/274 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ-LKHPHLV 145
LGEG +G+V + + VAVK++D+ + E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
G+ E + L EY + G L D++ + P R + A + +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG--VVYLHG--I 123
Query: 206 PVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+ +RD K N+LLD N K+SDFGLAT + + GT Y APE +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 266 -TTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEW--ARPMLKDFTKLDQIIDSRLE 322
DV+S G+VL +L G ++ ++ +W + L + K+D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQP-SDSXQEYSDWKEKKTYLNPWKKIDSAP----- 237
Query: 323 DRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
A+ H+ L NP +R T+ + K
Sbjct: 238 -----------LALLHKILVENPSARITIPDIKK 260
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHK 101
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L YS + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 273
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 274 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 40/303 (13%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQ 138
+F + LG G G V+K + +P +A K++ + R + + E+ L +
Sbjct: 34 DFEKISELGAGNGGVVFK----VSHKPS--GLVMARKLIHLEIKPAIRNQIIRELQVLHE 87
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
P++V G D + E+M G+L DQ+ K + +P K++I + L
Sbjct: 88 CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKK-AGRIPEQILGKVSIAVIKGLT 145
Query: 199 FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
+L E+ +++RD K SNIL++S KL DFG++ Q DS + V GT Y +PE
Sbjct: 146 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFV-GTRSYMSPE 200
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNR---------CKREKDLVEW------- 302
+ H + D++S G+ L+E+ GR + C+ E D E
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260
Query: 303 ----------ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMT 352
+RP + F LD I++ S + ++CL NP R +
Sbjct: 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 320
Query: 353 TVV 355
++
Sbjct: 321 QLM 323
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLGQL-KHPHL 144
LG G FGKV + ++ A TVAVK+L + RE L +E+ L L H ++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI--------------- 189
VNL+G C L++ EY G+L + L + S + T I
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 190 -AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ +AFL K I+RD A NILL K+ DFGLA D + +
Sbjct: 173 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE I T DV+S+G+ L EL + S P +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---------------PYPGMP 275
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
+K ++I + + C +P RPT +V+ +E
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLGQL-KHPHL 144
LG G FGKV + ++ A TVAVK+L + RE L +E+ L L H ++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 105
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI--------------- 189
VNL+G C L++ EY G+L + L + S + T I
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 190 -AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ +AFL K I+RD A NILL K+ DFGLA D + +
Sbjct: 166 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE I T DV+S+G+ L EL + S P +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---------------PYPGMP 268
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
+K ++I + + C +P RPT +V+ +E
Sbjct: 269 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FG+V C D + Q AVKV+ V L EV L QL HP+
Sbjct: 34 LGKGSFGEVIL-CKD-----KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA-IGAARCL----- 197
+ L + + + LV E G L D++ ++R + + + AAR +
Sbjct: 88 IXKLYEFFEDKGYFYLVGEVYTGGELFDEI----------ISRKRFSEVDAARIIRQVLS 137
Query: 198 AFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
+ + +++RD K N+LL+S D N ++ DFGL+T E S +GT Y
Sbjct: 138 GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST---HFEASKKXKDKIGTAYY 194
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE ++ G CDV+S GV+L LL+G
Sbjct: 195 IAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E++ +L D + + + +P + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
AF H V++RD K N+L++++ KL+DFGLA ++ V T Y AP
Sbjct: 117 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 258 E-YINTGHLTTMCDVFSFGVVLLELLTGR 285
E + + +T D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 139/315 (44%), Gaps = 46/315 (14%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVI 134
+ + H + + +G+G +G+V++G + + VAVK+ S+ + W E
Sbjct: 4 RTVAHQITLLECVGKGRYGEVWRG--------SWQGENVAVKIF---SSRDEKSWFRETE 52
Query: 135 FLG--QLKHPHLVNLIGYCCEDEHR----LLVYEYMALGNLHDQLFKNYSSTLPWLTRIK 188
L+H +++ I H L+ Y +G+L+D L +TL ++ ++
Sbjct: 53 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLR 109
Query: 189 IAIGAARCLAFLHGE-----EKPVI-YRDFKASNILLDSDYNAKLSDFGLATDGPQGEDS 242
I + A LA LH E KP I +RD K+ NIL+ + ++D GLA Q +
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
Query: 243 HIT--TCVMGTEGYAAPEYINTGHLTTMC-------DVFSFGVVLLELLTGRRSVEKNRC 293
+GT+ Y APE ++ + C D+++FG+VL E+ RR V
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIV 226
Query: 294 KREK----DLVEWARPMLKDFTKLDQIIDSR--LEDR-YSTEGAKRLAAVAHQCLSHNPK 346
+ K D+V P +D K+ + R + +R +S LA + +C NP
Sbjct: 227 EDYKPPFYDVVP-NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPS 285
Query: 347 SRPTMTTVVKALEPL 361
+R T + K L +
Sbjct: 286 ARLTALRIKKTLTKI 300
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLG 137
N+ +G+G F KV R L + VAVK++D ++ EV +
Sbjct: 16 NYRLQKTIGKGNFAKVKLA------RHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-- 195
L HP++V L ++ LV EY + G + D L + R+K A+
Sbjct: 70 ILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 121
Query: 196 --CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
A + +K +++RD KA N+LLD D N K++DFG + + G + T C G+
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG-NKLDTFC--GSPP 178
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTG 284
YAAPE + + DV+S GV+L L++G
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLGQL-KHPHL 144
LG G FGKV + ++ A TVAVK+L + RE L +E+ L L H ++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI--------------- 189
VNL+G C L++ EY G+L + L + S + T I
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 190 -AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ +AFL K I+RD A NILL K+ DFGLA D + +
Sbjct: 150 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE I T DV+S+G+ L EL + S P +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---------------PYPGMP 252
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
+K ++I + + C +P RPT +V+ +E
Sbjct: 253 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+ R +LG+GGF K Y+ + D + A V K + + Q + E+ L
Sbjct: 43 RYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSL 99
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP---WLTRIKIAIGAARC 196
+PH+V G+ +D+ +V E +L + + + T P + R I +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QG 154
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
+ +LH VI+RD K N+ L+ D + K+ DFGLAT + T C GT Y A
Sbjct: 155 VQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC--GTPNYIA 210
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
PE + + D++S G +L LL G+ E + C +E
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS-CLKE 249
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 147
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L YS + + +
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 208 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 319
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 320 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 126/303 (41%), Gaps = 49/303 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQLKHPHL- 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H HL
Sbjct: 35 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-HLN 92
Query: 145 -VNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPWLTR--------------IK 188
VNL+G C + L+V E+ GNL L + +P+ I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 153 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEW 302
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR------- 263
Query: 303 ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 264 ----LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLL 309
Query: 363 DLN 365
N
Sbjct: 310 QAN 312
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E++++ +L + + + +P + L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
AF H V++RD K N+L++++ KL+DFGLA ++ V T Y AP
Sbjct: 120 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 258 E-YINTGHLTTMCDVFSFGVVLLELLTGR 285
E + + +T D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLGQL-KHPHL 144
LG G FGKV + ++ A TVAVK+L + RE L +E+ L L H ++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 107
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI--------------- 189
VNL+G C L++ EY G+L + L + S + T I
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 190 -AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ +AFL K I+RD A NILL K+ DFGLA D + +
Sbjct: 168 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE I T DV+S+G+ L EL + S P +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---------------PYPGMP 270
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
+K ++I + + C +P RPT +V+ +E
Sbjct: 271 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 47/302 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQL-KHPHL 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H ++
Sbjct: 26 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 145 VNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPWLTR--------------IKI 189
VNL+G C + L+V E+ GNL L + +P+ I
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
+ A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 145 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 250 GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEWA 303
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 254
Query: 304 RPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 255 ---LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 364 LN 365
N
Sbjct: 302 AN 303
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLG 137
N+ +G+G F KV R L + VAVK++D S ++ EV +
Sbjct: 15 NYRLLKTIGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK 68
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-- 195
L HP++V L ++ LV EY + G + D L + R+K A+
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 120
Query: 196 --CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
A + +K +++RD KA N+LLD+D N K++DFG + + G G
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDAFCGAPP 177
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTG 284
YAAPE + + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 47/302 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQL-KHPHL 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H ++
Sbjct: 26 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 145 VNLIGYCCEDEHRLLVY-EYMALGNLHDQLFKNYSSTLPWLTR--------------IKI 189
VNL+G C + L+V E+ GNL L + +P+ I
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
+ A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 145 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 250 GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEWA 303
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 254
Query: 304 RPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 255 ---LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 364 LN 365
N
Sbjct: 302 AN 303
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E++++ +L + + + +P + L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAP 257
AF H V++RD K N+L++++ KL+DFGLA ++ V T Y AP
Sbjct: 118 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 258 E-YINTGHLTTMCDVFSFGVVLLELLTGR 285
E + + +T D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 110
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 111 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 110
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 111 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 118/288 (40%), Gaps = 45/288 (15%)
Query: 79 HNFSRSDYLGEGGFGK-VYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIF 135
+ R +GEG FGK + +D + +K ++++ S+ E EV
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTED-------GRQYVIKEINISRMSSKEREESRREVAV 76
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQ-------LFKNYSSTLPWLTRIK 188
L +KHP++V E+ +V +Y G+L + LF+ L W +I
Sbjct: 77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE-DQILDWFVQI- 134
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
CLA H ++ +++RD K+ NI L D +L DFG+A +
Sbjct: 135 -------CLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARAC 185
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+GT Y +PE D+++ G VL EL T + + E K+LV
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM---KNLVL------- 235
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
+II S + L ++ Q NP+ RP++ ++++
Sbjct: 236 ------KIISGSFPP-VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 118/258 (45%), Gaps = 16/258 (6%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+GEG G V C+ G + VAVK++D+ Q EV+ + +H ++V
Sbjct: 53 IGEGSTGIV---CLAREKHSG---RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
+ E ++ E++ G L D + + + T + + A LA+LH +
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQA---LAYLHAQ--G 161
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
VI+RD K+ +ILL D KLSDFG +D ++GT + APE I+
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQ--ISKDVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 267 TMCDVFSFGVVLLELLTGRRS-VEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRY 325
T D++S G++++E++ G + + K L + P LK+ K+ ++ LE
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERML 279
Query: 326 STEGAKRLAAVAHQCLSH 343
+ +R A A + L H
Sbjct: 280 VRDPQER--ATAQELLDH 295
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L YS + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + +++DFGLA D + TT
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 273
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 274 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 6 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 112
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 113 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 109
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 167
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 6 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 112
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 113 QLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 90
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L YS + + +
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 151 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 262
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 263 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 308
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 113
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 114 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 6 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 112
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 113 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 24/224 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+ R +LG+GGF K Y+ + D + A V K + + Q + E+ L
Sbjct: 43 RYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSL 99
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP---WLTRIKIAIGAARC 196
+PH+V G+ +D+ +V E +L + + + T P + R I +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QG 154
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT----DGPQGEDSHITTCVMGTE 252
+ +LH VI+RD K N+ L+ D + K+ DFGLAT DG + +D + GT
Sbjct: 155 VQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD------LCGTP 206
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
Y APE + + D++S G +L LL G+ E + C +E
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS-CLKE 249
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 88
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L YS + + +
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 149 CTYQLARGMEYLASQK--CIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 260
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 261 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 306
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 111
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
N+ LGEG FGKV K + + + KVL + QG E E+ +L L
Sbjct: 5 NYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 61
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
+HPH++ L + ++V EY A L D + + + R I +A + +
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 118
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAA 256
H + +++RD K N+LLD N K++DFGL+ TDG + T+C G+ YAA
Sbjct: 119 CHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTSC--GSPNYAA 170
Query: 257 PEYINTGHLTT--MCDVFSFGVVLLELLTGR 285
PE I +G L DV+S GV+L +L R
Sbjct: 171 PEVI-SGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 110
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 111 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLL-VYEYMALGNL--HDQLFKNYSSTLPWLTRIKIA 190
+F HP LV L C + E RL V EY+ G+L H Q + +I+
Sbjct: 105 VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 163
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
+ L +LH E+ +IYRD K N+LLDS+ + KL+D+G+ +G + D+ T C G
Sbjct: 164 L----ALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC--G 215
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D ++ GV++ E++ GR
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 109
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 110 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 111
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 5 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 111
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 93
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++NL+G C +D ++ EY + GNL + L YS + + +
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 154 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 265
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 266 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 311
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 126/303 (41%), Gaps = 49/303 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQLKHPHL- 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H HL
Sbjct: 35 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-HLN 92
Query: 145 -VNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPWLTR--------------IK 188
VNL+G C + L+V E+ GNL L + +P+ I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 153 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEW 302
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR------- 263
Query: 303 ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 264 ----LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLL 309
Query: 363 DLN 365
N
Sbjct: 310 QAN 312
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 8 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 114
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 115 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 170
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 113
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 114 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
N+ LGEG FGKV K + + + KVL + QG E E+ +L L
Sbjct: 14 NYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 70
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
+HPH++ L + ++V EY A L D + + + R I +A + +
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 127
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAA 256
H + +++RD K N+LLD N K++DFGL+ TDG + T+C G+ YAA
Sbjct: 128 CHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTSC--GSPNYAA 179
Query: 257 PEYINTGHLTT--MCDVFSFGVVLLELLTGR 285
PE I +G L DV+S GV+L +L R
Sbjct: 180 PEVI-SGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 24/224 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+ R +LG+GGF K Y+ + D + A V K + + Q + E+ L
Sbjct: 27 RYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSL 83
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP---WLTRIKIAIGAARC 196
+PH+V G+ +D+ +V E +L + + + T P + R I +
Sbjct: 84 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QG 138
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT----DGPQGEDSHITTCVMGTE 252
+ +LH VI+RD K N+ L+ D + K+ DFGLAT DG + +D + GT
Sbjct: 139 VQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD------LCGTP 190
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
Y APE + + D++S G +L LL G+ E + C +E
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS-CLKE 233
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 25/278 (8%)
Query: 73 ELQMITHN-FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
E Q +T N F + LG+GGFG+V C G ++ + +G L
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEV---CACQVRATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L ++ +V+L Y E + L LV M G+L ++ + P + A
Sbjct: 234 EKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
L LH E ++YRD K NILLD + ++SD GLA P+G+ +G
Sbjct: 293 AEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVG 347
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDF 310
T GY APE + T D ++ G +L E++ G+ ++ + K +++ VE
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE--------- 398
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
+L + + +R+S + ++ Q L +P R
Sbjct: 399 -RLVKEVPEEYSERFSPQA----RSLCSQLLCKDPAER 431
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 110
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
N+ LGEG FGKV K + + + KVL + QG E E+ +L L
Sbjct: 15 NYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 71
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
+HPH++ L + ++V EY A L D + + + R I +A + +
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 128
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAA 256
H + +++RD K N+LLD N K++DFGL+ TDG + T+C G+ YAA
Sbjct: 129 CHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTSC--GSPNYAA 180
Query: 257 PEYINTGHLTT--MCDVFSFGVVLLELLTGR 285
PE I +G L DV+S GV+L +L R
Sbjct: 181 PEVI-SGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 120/297 (40%), Gaps = 41/297 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQLKHPHL- 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H HL
Sbjct: 35 LGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH-HLN 92
Query: 145 -VNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPW-------LTR---IKIAIG 192
VNL+G C + L+V E+ GNL L + +P+ LT I +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE 252
A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 153 VAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE I T DV+SFGV+L E+ + S K
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------------VK 251
Query: 313 LDQIIDSRLEDRYSTEGAKRLAAVAHQ----CLSHNPKSRPTMTTVVKALEPLLDLN 365
+D+ RL++ +Q C P RPT + +V+ L LL N
Sbjct: 252 IDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 308
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 126/303 (41%), Gaps = 49/303 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQLKHPHL- 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H HL
Sbjct: 35 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-HLN 92
Query: 145 -VNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPWLTR--------------IK 188
VNL+G C + L+V E+ GNL L + +P+ I
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 153 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEW 302
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR------- 263
Query: 303 ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 264 ----LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLL 309
Query: 363 DLN 365
N
Sbjct: 310 QAN 312
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
N+ LGEG FGKV K + + + KVL + QG E E+ +L L
Sbjct: 9 NYQIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 65
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
+HPH++ L + ++V EY A L D + + + R I +A + +
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 122
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITTCVMGTEGYAA 256
H + +++RD K N+LLD N K++DFGL+ TDG + T+C G+ YAA
Sbjct: 123 CHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTSC--GSPNYAA 174
Query: 257 PEYINTGHLTT--MCDVFSFGVVLLELLTGR 285
PE I +G L DV+S GV+L +L R
Sbjct: 175 PEVI-SGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 25/278 (8%)
Query: 73 ELQMITHN-FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
E Q +T N F + LG+GGFG+V C G ++ + +G L
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEV---CACQVRATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L ++ +V+L Y E + L LV M G+L ++ + P + A
Sbjct: 234 EKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
L LH E ++YRD K NILLD + ++SD GLA P+G+ +G
Sbjct: 293 AEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVG 347
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDF 310
T GY APE + T D ++ G +L E++ G+ ++ + K +++ VE
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE--------- 398
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
+L + + +R+S + ++ Q L +P R
Sbjct: 399 -RLVKEVPEEYSERFSPQA----RSLCSQLLCKDPAER 431
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 47/302 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQL-KHPHL 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H ++
Sbjct: 26 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 145 VNLIGYCCEDEHRLLVY-EYMALGNLHDQLFKNYSSTLPWLTR--------------IKI 189
VNL+G C + L+V E+ GNL L + +P+ I
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
+ A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 145 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 250 GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEWA 303
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 254
Query: 304 RPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 255 ---LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 364 LN 365
N
Sbjct: 302 AN 303
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 47/302 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQL-KHPHL 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H ++
Sbjct: 72 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 130
Query: 145 VNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPWLTR--------------IKI 189
VNL+G C + L+V E+ GNL L + +P+ I
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
+ A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 191 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 250 GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEWA 303
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 300
Query: 304 RPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 301 ---LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLLQ 347
Query: 364 LN 365
N
Sbjct: 348 AN 349
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 47/302 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQL-KHPHL 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H ++
Sbjct: 26 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 145 VNLIGYCCEDEHRLLVY-EYMALGNLHDQLFKNYSSTLPWLTR--------------IKI 189
VNL+G C + L+V E+ GNL L + +P+ I
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
+ A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 145 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 250 GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEWA 303
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 254
Query: 304 RPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 255 ---LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 364 LN 365
N
Sbjct: 302 AN 303
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
++ D LG G FGKV G L VAVK+L+ R+ + + +G++
Sbjct: 12 HYVLGDTLGVGTFGKVKIG------EHQLTGHKVAVKILN-------RQKIRSLDVVGKI 58
Query: 140 K----------HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
K HPH++ L +V EY++ G L D + K+ R+
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 118
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---TDGPQGEDSHITT 246
I +A H V++RD K N+LLD+ NAK++DFGL+ +DG DS
Sbjct: 119 QILSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---- 170
Query: 247 CVMGTEGYAAPEYINTGHLTT--MCDVFSFGVVLLELLTG 284
C G+ YAAPE I +G L D++S GV+L LL G
Sbjct: 171 C--GSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 119/301 (39%), Gaps = 44/301 (14%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLG 137
+N LG G FGKV + L VAVK+L +E L +E+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 138 QL-KHPHLVNLIGYCCEDEHRLLVYEYMALGNL------------HDQLFKNYSSTLPWL 184
L +H ++VNL+G C L++ EY G+L D F +ST
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTR 164
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
+ + A+ +AFL K I+RD A N+LL + + AK+ DFGLA D + +
Sbjct: 165 DLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKD 298
+ APE I T DV+S+G++L E+ + + V K KD
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 282
Query: 299 LVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
+ A+P K + ++ C + P RPT + L
Sbjct: 283 GYQMAQPAF---------------------APKNIYSIMQACWALEPTHRPTFQQICSFL 321
Query: 359 E 359
+
Sbjct: 322 Q 322
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+ LD + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK 57
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 110
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+ LD + E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK 56
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+L HP++V L+ + LV+E+ LH L K ++ LT I + + +
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASA--LTGIPLPLIKSYLF 109
Query: 198 AFLHG----EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
L G V++RD K N+L++++ KL+DFGLA G T + T
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 167
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 40/297 (13%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLG 137
+N LG G FGKV + L VAVK+L +E L +E+ +
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 96
Query: 138 QL-KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTL------PWLTR--IK 188
L +H ++VNL+G C L++ EY G+L + L + + L P R +
Sbjct: 97 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ +AFL K I+RD A N+LL + + AK+ DFGLA D + +
Sbjct: 157 FSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEW 302
+ APE I T DV+S+G++L E+ + + V K KD +
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 274
Query: 303 ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
A+P K + ++ C + P RPT + L+
Sbjct: 275 AQPAF---------------------APKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 73
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L++ + M G L D + ++ + L W +I
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI----- 127
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 128 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 185 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGH--REWLAEVIFLGQLKHPHL 144
LG+G FG+V K C D + Q AVKV++ ++ L EV L +L HP++
Sbjct: 30 LGKGSFGEVLK-CKD-----RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ L + +V E G L D++ K + RI + + + ++H +
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG--ITYMH--K 139
Query: 205 KPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+++RD K NILL+S D + K+ DFGL+T Q +GT Y APE +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLR 196
Query: 262 TGHLTTMCDVFSFGVVLLELLTG 284
G CDV+S GV+L LL+G
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSG 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 34/272 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL--DVNGSQGHREWLAEVIFLGQLKHPHL 144
LG G +G V K +R Q +AVK + VN + R + I + + P
Sbjct: 59 LGRGAYGVVEK------MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 145 VNLIGYCCEDEHRLLVYEYM--ALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
V G + + E M +L + Q+ + T+P KIA+ + L LH
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI-- 260
+ VI+RD K SN+L+++ K+ DFG++ DS T G + Y APE I
Sbjct: 172 KLS-VIHRDVKPSNVLINALGQVKMCDFGISG---YLVDSVAKTIDAGCKPYMAPERINP 227
Query: 261 --NTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIID 318
N + D++S G+ ++EL R + W P F +L Q+++
Sbjct: 228 ELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTP----FQQLKQVVE 272
Query: 319 SRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPT 350
+ + + QCL N K RPT
Sbjct: 273 EPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 304
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLG 137
N+ +G+G F KV R L + VAV+++D S ++ EV +
Sbjct: 15 NYRLLKTIGKGNFAKVKLA------RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK 68
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR-- 195
L HP++V L ++ LV EY + G + D L + R+K A+
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 120
Query: 196 --CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
A + +K +++RD KA N+LLD+D N K++DFG + + G + C G+
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDEFC--GSPP 177
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTG 284
YAAPE + + DV+S GV+L L++G
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVI 134
++I + D LG GG VY +D + +K A+ + + + + EV
Sbjct: 7 KIINERYKIVDKLGGGGMSTVY--LAEDTIL-NIKVAIKAIFIPPREKEETLKRFEREVH 63
Query: 135 FLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA 194
QL H ++V++I ED+ LV EY+ L + + S P I
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQ 119
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
H + +++RD K NIL+DS+ K+ DFG+A + + T V+GT Y
Sbjct: 120 ILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQY 178
Query: 255 AAPEYINTGHLTTMC-DVFSFGVVLLELLTGR 285
+PE G T C D++S G+VL E+L G
Sbjct: 179 FSPEQAK-GEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++NL+G C +D ++ Y + GNL + L YS + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 273
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 274 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 126/303 (41%), Gaps = 49/303 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG-HREWLAEVIFLGQLKHPHL- 144
LG G FG+V + + +TVAVK+L + HR ++E+ L + H HL
Sbjct: 37 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-HLN 94
Query: 145 -VNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPWLTR--------------IK 188
VNL+G C + L+V E+ GNL L + +P+ I
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 155 YSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEW 302
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR------- 265
Query: 303 ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLL 362
LK+ T++ R D + E + + C P RPT + +V+ L LL
Sbjct: 266 ----LKEGTRM------RAPDYTTPEMYQTML----DCWHGEPSQRPTFSELVEHLGNLL 311
Query: 363 DLN 365
N
Sbjct: 312 QAN 314
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 40/297 (13%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLG 137
+N LG G FGKV + L VAVK+L +E L +E+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 138 QL-KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTL------PWLTR--IK 188
L +H ++VNL+G C L++ EY G+L + L + + L P R +
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ +AFL K I+RD A N+LL + + AK+ DFGLA D + +
Sbjct: 165 FSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLVEW 302
+ APE I T DV+S+G++L E+ + + V K KD +
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 282
Query: 303 ARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
A+P K + ++ C + P RPT + L+
Sbjct: 283 AQPAF---------------------APKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
++++L+G C +D ++ EY + GNL + L YS + + +
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 273
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 274 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++ L+G C +D ++ EY + GNL + L YS + + +
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 273
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 274 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYM-----------ALGNLHDQLFKNYSSTLPWLTR 186
+L HP++V L+ + LV+E++ AL + L K+Y L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQL----- 111
Query: 187 IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
+ LAF H V++RD K N+L++++ KL+DFGLA G T
Sbjct: 112 -------LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 160
Query: 247 CVMGTEGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
+ T Y APE + + +T D++S G + E++T R
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL--FKNYSSTLPWLTRIKIAIGAA- 194
+L HP++V L+ + LV+E+ LH L F + S+ LT I + + +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASA----LTGIPLPLIKSY 111
Query: 195 -----RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 250 GTEGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + + +T D++S G + E++T R
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 127 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 184 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGH--REWLAEVIFLGQLKHPHL 144
LG+G FG+V K C D + Q AVKV++ ++ L EV L +L HP++
Sbjct: 30 LGKGSFGEVLK-CKD-----RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ L + +V E G L D++ K + RI + + + ++H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG--ITYMHKHN 141
Query: 205 KPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+++RD K NILL+S D + K+ DFGL+T Q +GT Y APE +
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPEVLR 196
Query: 262 TGHLTTMCDVFSFGVVLLELLTG 284
G CDV+S GV+L LL+G
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSG 218
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---------DVNGSQGHREWL 130
NF LG+G FGKV V + AVKVL DV + + L
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKET------GDLYAVKVLKKDVILQDDDVECTMTEKRIL 77
Query: 131 AEVIFLGQLKHPHLVNLIGYCC--EDEHRLLVYEYMALGNL--HDQLFKNYSSTLPWLTR 186
+ L + HP L L +CC + V E++ G+L H Q + +
Sbjct: 78 S----LAR-NHPFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA 130
Query: 187 IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
+I L FLH +K +IYRD K N+LLD + + KL+DFG+ +G + T
Sbjct: 131 AEII----SALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF 184
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVE 301
C GT Y APE + D ++ GV+L E+L G E + E DL E
Sbjct: 185 C--GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE---AENEDDLFE 234
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 99/231 (42%), Gaps = 40/231 (17%)
Query: 80 NFSRSDYLGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFL 136
+F LG GGFG V+ K VDD A+K + + + RE + EV L
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDC--------NYAIKRIRLPNRELAREKVMREVKAL 57
Query: 137 GQLKHPHLVNLIGYCCEDEH---------RLLVYEYMAL---GNLHDQLFKNYSSTLPWL 184
+L+HP +V E ++ +Y M L NL D + N T+
Sbjct: 58 AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM--NGRCTIEER 115
Query: 185 TR---IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGED 241
R + I + A + FLH K +++RD K SNI D K+ DFGL T Q E+
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 173
Query: 242 SHITTCVM----------GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELL 282
M GT+ Y +PE I+ + D+FS G++L ELL
Sbjct: 174 EQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 16/220 (7%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+ R +LG+GGF K Y+ + D + A V K + + Q + E+ L
Sbjct: 43 RYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSL 99
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP---WLTRIKIAIGAARC 196
+PH+V G+ +D+ +V E +L + + + T P + R I +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QG 154
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
+ +LH VI+RD K N+ L+ D + K+ DFGLAT + C GT Y A
Sbjct: 155 VQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC--GTPNYIA 210
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
PE + + D++S G +L LL G+ E + C +E
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS-CLKE 249
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 46/303 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLG--QLKHPHL 144
+G+G +G+V++G + + VAVK+ S+ + W E L+H ++
Sbjct: 45 VGKGRYGEVWRG--------SWQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENI 93
Query: 145 VNLIGYCCEDEHR----LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
+ I H L+ Y +G+L+D L +TL ++ ++I + A LA L
Sbjct: 94 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHL 150
Query: 201 HGE-----EKPVI-YRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT--TCVMGTE 252
H E KP I +RD K+ NIL+ + ++D GLA Q + +GT+
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 210
Query: 253 GYAAPEYINTGHLTTMC-------DVFSFGVVLLELLTGRRSVEKNRCKREK----DLVE 301
Y APE ++ + C D+++FG+VL E+ RR V + K D+V
Sbjct: 211 RYMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVP 267
Query: 302 WARPMLKDFTKLDQIIDSR--LEDR-YSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
P +D K+ + R + +R +S LA + +C NP +R T + K L
Sbjct: 268 -NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 326
Query: 359 EPL 361
+
Sbjct: 327 TKI 329
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGH--REWLAEVIFLGQLKHPHL 144
LG+G FG+V K C D + Q AVKV++ ++ L EV L +L HP++
Sbjct: 30 LGKGSFGEVLK-CKDR-----ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
+ L + +V E G L D++ K + RI + + + ++H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG--ITYMHKHN 141
Query: 205 KPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+++RD K NILL+S D + K+ DFGL+T Q +GT Y APE +
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPEVLR 196
Query: 262 TGHLTTMCDVFSFGVVLLELLTG 284
G CDV+S GV+L LL+G
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSG 218
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR 127
+F + L+ I+ LG+G FG V + C D L A VAVK L +G R
Sbjct: 6 IFEERHLKYISQ-------LGKGNFGSV-ELCRYDPLGDNTGA-LVAVKQLQHSGPDQQR 56
Query: 128 EWLAEVIFLGQLKHPHLVNLIG--YCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLT 185
++ E+ L L +V G Y + LV EY+ G L D +L
Sbjct: 57 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD-----------FLQ 105
Query: 186 RIKIAIGAARCLAF----LHGEE----KPVIYRDFKASNILLDSDYNAKLSDFGLATDGP 237
R + + A+R L + G E + ++RD A NIL++S+ + K++DFGLA P
Sbjct: 106 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 165
Query: 238 QGEDSHITTCVMGTE-GYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+D ++ + + APE ++ + DV+SFGVVL EL T
Sbjct: 166 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 37/296 (12%)
Query: 87 LGEGGFGKVY--KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHP 142
LGEG FG+V + D +P +A TVAVK+L + ++ L + + ++ KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK------NYS--------STLPWLTRIK 188
+++NL+G C +D ++ Y + GNL + L YS + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
AR + +L ++ I+RD A N+L+ + K++DFGLA D + TT
Sbjct: 162 CTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE + T DV+SFGV++ E+ T S VE +LK
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLK 273
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
+ ++D+ + E L + C P RPT +V+ L+ +L L
Sbjct: 274 EGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 73
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L++ + M G L D + ++ + L W +I
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 127
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 128 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 185 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQL 139
+ + LG GGFG V + D + VA+K S +RE W E+ + +L
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDT------GEQVAIKQCRQELSPKNRERWCLEIQIMKKL 70
Query: 140 KHPHLVNL------IGYCCEDEHRLLVYEYMALGNLHDQL--FKNYSSTLPWLTRIKIAI 191
HP++V+ + ++ LL EY G+L L F+N R ++
Sbjct: 71 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS- 129
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTCV 248
+ L +LH E +I+RD K NI+L K+ D G A + QGE + T
Sbjct: 130 DISSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEF 184
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRR 286
+GT Y APE + T D +SFG + E +TG R
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 46/303 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLG--QLKHPHL 144
+G+G +G+V++G + + VAVK+ S+ + W E L+H ++
Sbjct: 16 VGKGRYGEVWRG--------SWQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENI 64
Query: 145 VNLIGYCCEDEHR----LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
+ I H L+ Y +G+L+D L +TL ++ ++I + A LA L
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHL 121
Query: 201 HGE-----EKPVI-YRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT--TCVMGTE 252
H E KP I +RD K+ NIL+ + ++D GLA Q + +GT+
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 253 GYAAPEYINTGHLTTMC-------DVFSFGVVLLELLTGRRSVEKNRCKREK----DLVE 301
Y APE ++ + C D+++FG+VL E+ RR V + K D+V
Sbjct: 182 RYMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVP 238
Query: 302 WARPMLKDFTKLDQIIDSR--LEDR-YSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
P +D K+ + R + +R +S LA + +C NP +R T + K L
Sbjct: 239 -NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
Query: 359 EPL 361
+
Sbjct: 298 TKI 300
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 76
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L++ + M G L D + ++ + L W +I
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 130
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 131 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 188 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FGKVYK N G A A KV++ + +++ E+ L HP++V
Sbjct: 27 LGDGAFGKVYKA---KNKETGALA---AAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI---GAARCLAFLHGE 203
L+G D ++ E+ G + + + LT +I + L FLH
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHS- 135
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDG---PQGEDSHITTCVMGTEGYAAPEYI 260
K +I+RD KA N+L+ + + +L+DFG++ Q DS I GT + APE +
Sbjct: 136 -KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVV 189
Query: 261 NTGHLTTM-----CDVFSFGVVLLEL 281
+ D++S G+ L+E+
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLG 137
N+ +G+G F KV R L + VAVK++D S ++ EV
Sbjct: 15 NYRLLKTIGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXK 68
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
L HP++V L ++ LV EY + G + D L + + K A R +
Sbjct: 69 VLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH------GRXKEKEARAKFRQI 122
Query: 198 --AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
A + +K +++RD KA N+LLD+D N K++DFG + + G G YA
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPYA 179
Query: 256 APE-YINTGHLTTMCDVFSFGVVLLELLTG 284
APE + + DV+S GV+L L++G
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 35/305 (11%)
Query: 71 LKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL--DVNGSQGHRE 128
L+++ + F+ LG+G FG V + + +K VAVK+L D+ S E
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVK---VAVKMLKADIIASSDIEE 71
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHR------LLVYEYMALGNLHDQLFKNYSS--- 179
+L E + + HPH+ L+G + +++ +M G+LH L +
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 180 -TLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQ 238
LP T ++ + A + +L + I+RD A N +L D ++DFGL+
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSS--RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS 189
Query: 239 GEDSHITTCVMGTE-GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREK 297
G D + C + A E + T DV++FGV + E++T R +
Sbjct: 190 G-DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT--------RGQTPY 240
Query: 298 DLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKA 357
+E A + + L I +RL + E + + + +QC S +PK RP+ T +
Sbjct: 241 AGIENA----EIYNYL--IGGNRL--KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRME 292
Query: 358 LEPLL 362
LE +L
Sbjct: 293 LENIL 297
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR 127
+F + L+ I+ LG+G FG V + C D L A VAVK L +G R
Sbjct: 7 IFEERHLKYISQ-------LGKGNFGSV-ELCRYDPLGDNTGA-LVAVKQLQHSGPDQQR 57
Query: 128 EWLAEVIFLGQLKHPHLVNLIG--YCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLT 185
++ E+ L L +V G Y + LV EY+ G L D +L
Sbjct: 58 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD-----------FLQ 106
Query: 186 RIKIAIGAARCLAF----LHGEE----KPVIYRDFKASNILLDSDYNAKLSDFGLATDGP 237
R + + A+R L + G E + ++RD A NIL++S+ + K++DFGLA P
Sbjct: 107 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 166
Query: 238 QGEDSHITTCVMGTE-GYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+D ++ + + APE ++ + DV+SFGVVL EL T
Sbjct: 167 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L++ + M G L D + ++ + L W +I
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 128
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 129 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 186 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L++ + M G L D + ++ + L W +I
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 129
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 130 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 187 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L++ + M G L D + ++ + L W +I
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 127 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 184 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFLG 137
NF + + +GEG +G VYK R L + VA+K LD + E+ L
Sbjct: 7 NFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA--- 194
+L HP++V L+ + LV+E++ DQ K + LT I + + +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHV------DQDLKKFMDASA-LTGIPLPLIKSYLF 113
Query: 195 ---RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ LAF H V++RD K N+L++++ KL+DFGLA ++ V T
Sbjct: 114 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 252 EGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE + + +T D++S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQL 139
+ + LG GGFG V + D + VA+K S +RE W E+ + +L
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDT------GEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69
Query: 140 KHPHLVNL------IGYCCEDEHRLLVYEYMALGNLHDQL--FKNYSSTLPWLTRIKIAI 191
HP++V+ + ++ LL EY G+L L F+N R ++
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS- 128
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTCV 248
+ L +LH E +I+RD K NI+L K+ D G A + QGE + T
Sbjct: 129 DISSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEF 183
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRR 286
+GT Y APE + T D +SFG + E +TG R
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 26/228 (11%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLG 137
N LG G FGKV + G+ Q VAVK+L RE L +E+ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQ-VAVKMLKEKADSSEREALMSELKMMT 103
Query: 138 QL-KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL-------------FKNYS----- 178
QL H ++VNL+G C L++EY G+L + L ++N
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 179 ---STLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD 235
+ L + + A A+ + FL E K ++RD A N+L+ K+ DFGLA D
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFL--EFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 236 GPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + + APE + G T DV+S+G++L E+ +
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG+G FGKVYK N G A A KV++ + +++ E+ L HP++V
Sbjct: 19 LGDGAFGKVYKA---KNKETGALA---AAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI---GAARCLAFLHGE 203
L+G D ++ E+ G + + + LT +I + L FLH
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHS- 127
Query: 204 EKPVIYRDFKASNILLDSDYNAKLSDFGLATDG---PQGEDSHITTCVMGTEGYAAPEYI 260
K +I+RD KA N+L+ + + +L+DFG++ Q DS I GT + APE +
Sbjct: 128 -KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVV 181
Query: 261 NTGHLTTM-----CDVFSFGVVLLEL 281
+ D++S G+ L+E+
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 82
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 83 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 136
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 137 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 194 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLL-VYEYMALGNL--HDQLFKNYSSTLPWLTRIKIA 190
+F HP LV L C + E RL V EY+ G+L H Q + +I+
Sbjct: 73 VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 131
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
+ L +LH E+ +IYRD K N+LLDS+ + KL+D+G+ +G + D+ C G
Sbjct: 132 L----ALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--G 183
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D ++ GV++ E++ GR
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR 127
+F + L+ I+ LG+G FG V + C D L A VAVK L +G R
Sbjct: 19 IFEERHLKYISQ-------LGKGNFGSV-ELCRYDPLGDNTGA-LVAVKQLQHSGPDQQR 69
Query: 128 EWLAEVIFLGQLKHPHLVNLIG--YCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLT 185
++ E+ L L +V G Y + LV EY+ G L D +L
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD-----------FLQ 118
Query: 186 RIKIAIGAARCLAF----LHGEE----KPVIYRDFKASNILLDSDYNAKLSDFGLATDGP 237
R + + A+R L + G E + ++RD A NIL++S+ + K++DFGLA P
Sbjct: 119 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178
Query: 238 QGEDSHITTCVMGTE-GYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+D ++ + + APE ++ + DV+SFGVVL EL T
Sbjct: 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 127 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 184 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 84 SDYLGEGGFGKVYKGCVDDNLRPG-LKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP 142
++ LG+G F K++KG + G L V +KVLD + + +L H
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
HLV G C + +LV E++ G+L L KN + + L ++++A A + FL
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFL-- 129
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE------GYAA 256
EE +I+ + A NILL + + K + + D I+ V+ + +
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFI----KLSDPGISITVLPKDILQERIPWVP 185
Query: 257 PEYI-NTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQ 315
PE I N +L D +SFG L E+ +G K + LD
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSGGD---------------------KPLSALDS 224
Query: 316 IIDSRL-EDRYSTEGAK--RLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDIPIG 370
+ EDR+ K LA + + C+ + P RP+ +++ L L + +P G
Sbjct: 225 QRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 26/277 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQ 138
+F + LG G G V+K + +P +A K++ + R + + E+ L +
Sbjct: 26 DFEKISELGAGNGGVVFK----VSHKP--SGLVMARKLIHLEIKPAIRNQIIRELQVLHE 79
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
P++V G D + E+M G+L DQ+ K + +P K++I + L
Sbjct: 80 CNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKK-AGRIPEQILGKVSIAVIKGLT 137
Query: 199 FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
+L E+ +++RD K SNIL++S KL DFG++ Q DS + V GT Y +PE
Sbjct: 138 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFV-GTRSYMSPE 192
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIID 318
+ H + D++S G+ L+E+ GR + + F LD I++
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS------------MAIFELLDYIVN 240
Query: 319 SRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVV 355
S + ++CL NP R + ++
Sbjct: 241 EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 277
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 41/299 (13%)
Query: 84 SDYLGEGGFGKVYKGCVDDNLRPG-LKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP 142
++ LG+G F K++KG + G L V +KVLD + + +L H
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 143 HLVNLIGYC-CEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
HLV G C C DE+ +LV E++ G+L L KN + + L ++++A A + FL
Sbjct: 73 HLVLNYGVCFCGDEN-ILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAWAMHFL- 129
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE------GYA 255
EE +I+ + A NILL + + K + + D I+ V+ + +
Sbjct: 130 -EENTLIHGNVCAKNILLIREEDRKTGNPPFI----KLSDPGISITVLPKDILQERIPWV 184
Query: 256 APEYI-NTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLD 314
PE I N +L D +SFG L E+ +G K + LD
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGD---------------------KPLSALD 223
Query: 315 QIIDSRL-EDRYSTEGAK--RLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDIPIG 370
+ EDR+ K LA + + C+ + P RP+ +++ L L + +P G
Sbjct: 224 SQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 115/291 (39%), Gaps = 36/291 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLGQL-KHPHL 144
LG G FGKV + ++ A TVAVK+L + RE L +E+ L L H ++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD-AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI--------------- 189
VNL+G C L++ EY G+L + L + S + T I
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 190 -AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ A+ +AFL K I+RD A NILL K+ DFGLA + +
Sbjct: 173 FSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLK 308
+ APE I T DV+S+G+ L EL + S P +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---------------PYPGMP 275
Query: 309 DFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALE 359
+K ++I + + C +P RPT +V+ +E
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 129
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 130 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 187 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 129
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 130 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 187 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 128
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 129 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 186 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 133
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 134 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 191 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 127 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 184 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 129
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 130 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 187 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 78
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 79 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 132
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 133 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 190 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 116/283 (40%), Gaps = 51/283 (18%)
Query: 36 STQRLLLTDVSNPGSPISLNELS---SSLV----------GSNLHVF---------TLKE 73
S QR L + +P SPI++ L +SLV N+ F ++
Sbjct: 10 SRQRKLEALIRDPRSPINVESLLDGLNSLVLDLDFPALRKNKNIDNFLNRYEKIVKKIRG 69
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD----VNGSQGHREW 129
LQM ++ +G G FG+V +R + A+K+L + S W
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQL------VRHKASQKVYAMKLLSKFEMIKRSDSAFFW 123
Query: 130 LAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL----T 185
E + P +V L +D++ +V EYM G+L + L NY W
Sbjct: 124 -EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTA 181
Query: 186 RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ +A+ A + +H RD K N+LLD + KL+DFG + H
Sbjct: 182 EVVLALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD 233
Query: 246 TCVMGTEGYAAPEYINT----GHLTTMCDVFSFGVVLLELLTG 284
T V GT Y +PE + + G+ CD +S GV L E+L G
Sbjct: 234 TAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLG 137
N+ +G+G F KV R L + VA+K++D ++ EV +
Sbjct: 13 NYRLLKTIGKGNFAKVKLA------RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 66
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
L HP++V L ++ L+ EY + G + D L + + K A R +
Sbjct: 67 ILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQI 120
Query: 198 --AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
A + +K +++RD KA N+LLD+D N K++DFG + + G T C G+ YA
Sbjct: 121 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD-TFC--GSPPYA 177
Query: 256 APE-YINTGHLTTMCDVFSFGVVLLELLTG 284
APE + + DV+S GV+L L++G
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLL-VYEYMALGNL--HDQLFKNYSSTLPWLTRIKIA 190
+F HP LV L C + E RL V EY+ G+L H Q + +I+
Sbjct: 58 VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 116
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
+ L +LH E+ +IYRD K N+LLDS+ + KL+D+G+ +G + D+ C G
Sbjct: 117 L----ALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--G 168
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D ++ GV++ E++ GR
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 66
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 67 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 120
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 121 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 178 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLL-VYEYMALGNL--HDQLFKNYSSTLPWLTRIKIA 190
+F HP LV L C + E RL V EY+ G+L H Q + +I+
Sbjct: 62 VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 120
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
+ L +LH E+ +IYRD K N+LLDS+ + KL+D+G+ +G + D+ C G
Sbjct: 121 L----ALNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--G 172
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D ++ GV++ E++ GR
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 97
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 98 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 151
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 152 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 208
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 209 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 92/221 (41%), Gaps = 28/221 (12%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEV----- 133
+ D +G G V + CV AVK+++V + E L EV
Sbjct: 94 QKYDPKDVIGRG-VSSVVRRCVH-----RATGHEFAVKIMEVTAERLSPEQLEEVREATR 147
Query: 134 ----IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
I HPH++ LI LV++ M G L D L + + + I
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMR 207
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
++ A ++FLH +++RD K NILLD + +LSDFG + GE +
Sbjct: 208 SLLEA--VSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---LRELC 260
Query: 250 GTEGYAAPEYINTGHLTTM------CDVFSFGVVLLELLTG 284
GT GY APE + T D+++ GV+L LL G
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQLKHPHLV 145
+GEG FG+V++ L P VAVK+L S + ++ E + + +P++V
Sbjct: 55 IGEGAFGRVFQARAP-GLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLT-------------------- 185
L+G C + L++EYMA G+L++ L T+ L+
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 186 --RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH 243
++ IA A +A+L E+ ++RD N L+ + K++DFGL+ + +
Sbjct: 174 AEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 244 ITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ PE I TT DV+++GVVL E+ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR 127
+F + L+ I+ LG+G FG V + C D L A VAVK L +G R
Sbjct: 3 IFEERHLKYISQ-------LGKGNFGSV-ELCRYDPLGDNTGA-LVAVKQLQHSGPDQQR 53
Query: 128 EWLAEVIFLGQLKHPHLVNLIG--YCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLT 185
++ E+ L L +V G Y LV EY+ G L D +L
Sbjct: 54 DFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRD-----------FLQ 102
Query: 186 RIKIAIGAARCLAF----LHGEE----KPVIYRDFKASNILLDSDYNAKLSDFGLATDGP 237
R + + A+R L + G E + ++RD A NIL++S+ + K++DFGLA P
Sbjct: 103 RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 162
Query: 238 QGEDSHITTCVMGTE-GYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+D + + + APE ++ + DV+SFGVVL EL T
Sbjct: 163 LDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 87 LGEGGFGKVY---KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FGKV + D+ + + V ++ DV + + E L P
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT------MVEKRVLALPGKPP 402
Query: 144 LVNLIGYCCEDEHRL-LVYEYMALGNL--HDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
+ + C + RL V EY+ G+L H Q + +IAIG L FL
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFL 458
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
+ K +IYRD K N++LDS+ + K++DFG+ + D T GT Y APE I
Sbjct: 459 --QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEII 514
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRRSVE 289
D ++FGV+L E+L G+ E
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 70 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 123
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 124 -AEGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 180
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 181 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 87 LGEGGFGKVYKGCVD---DNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQLKHP 142
LGEG FGKV D DN + VAVK L H + E+ L L H
Sbjct: 29 LGEGHFGKVELCRYDPEGDNT-----GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 143 HLVNLIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
++V G C ED L+ E++ G+L + L KN + + ++K A+ + + +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYL 142
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG---YAAP 257
+ ++RD A N+L++S++ K+ DFGL D T + + AP
Sbjct: 143 GSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTK--AIETDKEXXTVKDDRDSPVFWYAP 198
Query: 258 EYINTGHLTTMCDVFSFGVVLLELLT 283
E + DV+SFGV L ELLT
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 24/262 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+GEG G V V + + VAVK +D+ Q EV+ + +H ++V
Sbjct: 159 IGEGSTGIVCIATVRSS------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG---- 202
+ + +V E++ G L D + TR+ AA CLA L
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVL 263
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINT 262
+ VI+RD K+ +ILL D KLSDFG ++ ++GT + APE I+
Sbjct: 264 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISR 321
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRS-VEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRL 321
D++S G++++E++ G + K K + + P LK+ K+ + L
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 381
Query: 322 EDRYSTEGAKRLAAVAHQCLSH 343
+ + A+R A A + L H
Sbjct: 382 DRLLVRDPAQR--ATAAELLKH 401
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGC-VDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ 138
F + LG G FG VYKG + + + +K +++ + + ++E L E +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEK--VKIPVAIMELREATSPKANKEILDEAYVMAS 107
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIGA 193
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 108 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 160
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGTE 252
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H + +
Sbjct: 161 AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ A E I T DV+S+GV + EL+T
Sbjct: 219 -WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 101/241 (41%), Gaps = 20/241 (8%)
Query: 47 NPGSPISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRP 106
+P E+ SL H T+ E + + LG+G FGKV V +
Sbjct: 127 SPSDNSGAEEMEVSLAKPK-HRVTMNEFEYLK-------LLGKGTFGKVI--LVKEKATG 176
Query: 107 GLKAQTVAVK-VLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYM 164
A + K V+ H L E L +HP L L Y + RL V EY
Sbjct: 177 RYYAMKILKKEVIVAKDEVAHT--LTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYA 233
Query: 165 ALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYN 224
G L L + + I +A L +LH E K V+YRD K N++LD D +
Sbjct: 234 NGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLHSE-KNVVYRDLKLENLMLDKDGH 290
Query: 225 AKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
K++DFGL +G + + T C GT Y APE + D + GVV+ E++ G
Sbjct: 291 IKITDFGLCKEGIKDGATMKTFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
Query: 285 R 285
R
Sbjct: 349 R 349
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 24/262 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+GEG G V V + + VAVK +D+ Q EV+ + +H ++V
Sbjct: 39 IGEGSTGIVCIATVRSS------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG---- 202
+ + +V E++ G L D + TR+ AA CLA L
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVL 143
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINT 262
+ VI+RD K+ +ILL D KLSDFG ++ ++GT + APE I+
Sbjct: 144 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISR 201
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRS-VEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRL 321
D++S G++++E++ G + K K + + P LK+ K+ + L
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 261
Query: 322 EDRYSTEGAKRLAAVAHQCLSH 343
+ + A+R A A + L H
Sbjct: 262 DRLLVRDPAQR--ATAAELLKH 281
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 101/241 (41%), Gaps = 20/241 (8%)
Query: 47 NPGSPISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRP 106
+P E+ SL H T+ E + + LG+G FGKV V +
Sbjct: 124 SPSDNSGAEEMEVSLAKPK-HRVTMNEFEYLK-------LLGKGTFGKVI--LVKEKATG 173
Query: 107 GLKAQTVAVK-VLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYM 164
A + K V+ H L E L +HP L L Y + RL V EY
Sbjct: 174 RYYAMKILKKEVIVAKDEVAHT--LTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYA 230
Query: 165 ALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYN 224
G L L + + I +A L +LH E K V+YRD K N++LD D +
Sbjct: 231 NGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLHSE-KNVVYRDLKLENLMLDKDGH 287
Query: 225 AKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
K++DFGL +G + + T C GT Y APE + D + GVV+ E++ G
Sbjct: 288 IKITDFGLCKEGIKDGATMKTFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
Query: 285 R 285
R
Sbjct: 346 R 346
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--------QGHREW-L 130
N+ + LG G V + C+ +P K AVK++DV G Q RE L
Sbjct: 18 NYEPKEILGRG-VSSVVRRCIH---KPTCKE--YAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 131 AEVIFLGQLK-HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
EV L ++ HP+++ L + LV++ M G L D L + + + +I
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
A+ C LH + +++RD K NILLD D N KL+DFG + GE V
Sbjct: 132 ALLEVICA--LH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRSVC 184
Query: 250 GTEGYAAPEYI----NTGH--LTTMCDVFSFGVVLLELLTG 284
GT Y APE I N H D++S GV++ LL G
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 87 LGEGGFGKVYKGC-VDDNLRPGLKAQTVAVKVLDVNGS-QGHREWLAEVIFLGQLKHPHL 144
LG G FG VYKG + D + VA+KVL N S + ++E L E + + P++
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKI---PVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNY-----SSTLPWLTRIKIAIGAARCLAF 199
L+G C +L V + M G L D + +N L W +I A+ +++
Sbjct: 82 SRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSY 134
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEY 259
L E+ +++RD A N+L+ S + K++DFGLA E + + A E
Sbjct: 135 L--EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 260 INTGHLTTMCDVFSFGVVLLELLT-GRRSVEKNRCKREKDLVE 301
I T DV+S+GV + EL+T G + + + DL+E
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE 235
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 24/262 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+GEG G V V + + VAVK +D+ Q EV+ + +H ++V
Sbjct: 82 IGEGSTGIVCIATVRSS------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG---- 202
+ + +V E++ G L D + TR+ AA CLA L
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVL 186
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINT 262
+ VI+RD K+ +ILL D KLSDFG ++ ++GT + APE I+
Sbjct: 187 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISR 244
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRS-VEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRL 321
D++S G++++E++ G + K K + + P LK+ K+ + L
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 304
Query: 322 EDRYSTEGAKRLAAVAHQCLSH 343
+ + A+R A A + L H
Sbjct: 305 DRLLVRDPAQR--ATAAELLKH 324
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 24/262 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+GEG G V V + + VAVK +D+ Q EV+ + +H ++V
Sbjct: 37 IGEGSTGIVCIATVRSS------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG---- 202
+ + +V E++ G L D + TR+ AA CLA L
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVL 141
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINT 262
+ VI+RD K+ +ILL D KLSDFG ++ ++GT + APE I+
Sbjct: 142 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISR 199
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRS-VEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRL 321
D++S G++++E++ G + K K + + P LK+ K+ + L
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 259
Query: 322 EDRYSTEGAKRLAAVAHQCLSH 343
+ + A+R A A + L H
Sbjct: 260 DRLLVRDPAQR--ATAAELLKH 279
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLG 137
N+ +G+G F KV R L + VA+K++D ++ EV +
Sbjct: 16 NYRLLKTIGKGNFAKVKLA------RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
L HP++V L ++ L+ EY + G + D L + + K A R +
Sbjct: 70 ILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQI 123
Query: 198 --AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
A + +K +++RD KA N+LLD+D N K++DFG + + G G YA
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYA 180
Query: 256 APE-YINTGHLTTMCDVFSFGVVLLELLTG 284
APE + + DV+S GV+L L++G
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 87 LGEGGFGKVYKGCVD---DNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQLKHP 142
LGEG FGKV D DN + VAVK L H + E+ L L H
Sbjct: 17 LGEGHFGKVELCRYDPEGDNT-----GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 143 HLVNLIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
++V G C ED L+ E++ G+L + L KN + + ++K A+ + + +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYL 130
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG---YAAP 257
+ ++RD A N+L++S++ K+ DFGL D T + + AP
Sbjct: 131 GSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTK--AIETDKEXXTVKDDRDSPVFWYAP 186
Query: 258 EYINTGHLTTMCDVFSFGVVLLELLT 283
E + DV+SFGV L ELLT
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 24/262 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+GEG G V V + + VAVK +D+ Q EV+ + +H ++V
Sbjct: 28 IGEGSTGIVCIATVRSS------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG---- 202
+ + +V E++ G L D + TR+ AA CLA L
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVL 132
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINT 262
+ VI+RD K+ +ILL D KLSDFG ++ ++GT + APE I+
Sbjct: 133 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISR 190
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRS-VEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRL 321
D++S G++++E++ G + K K + + P LK+ K+ + L
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 250
Query: 322 EDRYSTEGAKRLAAVAHQCLSH 343
+ + A+R A A + L H
Sbjct: 251 DRLLVRDPAQR--ATAAELLKH 270
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L++ + M G L D + ++ + L W +I
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 128
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFG A G + ++ H +
Sbjct: 129 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 186 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 24/262 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+GEG G V V + + VAVK +D+ Q EV+ + +H ++V
Sbjct: 32 IGEGSTGIVCIATVRSS------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG---- 202
+ + +V E++ G L D + TR+ AA CLA L
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVL 136
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINT 262
+ VI+RD K+ +ILL D KLSDFG ++ ++GT + APE I+
Sbjct: 137 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELISR 194
Query: 263 GHLTTMCDVFSFGVVLLELLTGRRS-VEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRL 321
D++S G++++E++ G + K K + + P LK+ K+ + L
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 254
Query: 322 EDRYSTEGAKRLAAVAHQCLSH 343
+ + A+R A A + L H
Sbjct: 255 DRLLVRDPAQR--ATAAELLKH 274
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 76
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L++ + M G L D + ++ + L W +I
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 130
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFG A G + ++ H +
Sbjct: 131 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 188 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L++ + M G L D + ++ + L W +I
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 128
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFG A G + ++ H +
Sbjct: 129 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 186 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL--DVNGSQGHREW-LAEVIFLGQLKHPH 143
LG+G FGKV R G + + A+K+L DV E + E L L P
Sbjct: 27 LGKGSFGKVMLAD-----RKGTE-ELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 144 LVNLIGYCCEDEHRL-LVYEYMALGNL--HDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
+ + C + RL V EY+ G+L H Q + +I+IG L FL
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG----LFFL 136
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
H ++ +IYRD K N++LDS+ + K++DFG+ + D T GT Y APE I
Sbjct: 137 H--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE--HMMDGVTTREFCGTPDYIAPEII 192
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGR 285
D +++GV+L E+L G+
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 119/303 (39%), Gaps = 46/303 (15%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLG 137
+N LG G FGKV + L VAVK+L +E L +E+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 138 QL-KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--------------NYSSTLP 182
L +H ++VNL+G C L++ EY G+L + L + N L
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 183 WLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDS 242
+ + A+ +AFL K I+RD A N+LL + + AK+ DFGLA D +
Sbjct: 165 SRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 243 HITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKRE 296
+ + APE I T DV+S+G++L E+ + + V K
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 282
Query: 297 KDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
KD + A+P K + ++ C + P RPT +
Sbjct: 283 KDGYQMAQPAF---------------------APKNIYSIMQACWALEPTHRPTFQQICS 321
Query: 357 ALE 359
L+
Sbjct: 322 FLQ 324
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 87 LGEGGFGKVY---KGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPH 143
LG+G FGKV + D+ + + V ++ DV + + E L P
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT------MVEKRVLALPGKPP 81
Query: 144 LVNLIGYCCEDEHRL-LVYEYMALGNL--HDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
+ + C + RL V EY+ G+L H Q + +IAIG L FL
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFL 137
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
+ K +IYRD K N++LDS+ + K++DFG+ + D T GT Y APE I
Sbjct: 138 --QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEII 193
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGRRSVE 289
D ++FGV+L E+L G+ E
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + L G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L++ + M G L D + ++ + L W +I
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 133
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 134 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 191 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 26/220 (11%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLA 131
Q + + + + +GEG +G VYK D+ + + VA+K LD +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKA--KDS-----QGRIVALKRIRLDAEDEGIPSTAIR 68
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L +L HP++V+LI + LV+E+M +L L +N + ++IKI +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQD--SQIKIYL 125
Query: 192 -----GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
G A C + +++RD K N+L++SD KL+DFGLA S+
Sbjct: 126 YQLLRGVAHC------HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 247 CVMGTEGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
V T Y AP+ + + +T D++S G + E++TG+
Sbjct: 180 VV--TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 26/220 (11%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLA 131
Q + + + + +GEG +G VYK D+ + + VA+K LD +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKA--KDS-----QGRIVALKRIRLDAEDEGIPSTAIR 68
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L +L HP++V+LI + LV+E+M +L L +N + ++IKI +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQD--SQIKIYL 125
Query: 192 -----GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
G A C + +++RD K N+L++SD KL+DFGLA S+
Sbjct: 126 YQLLRGVAHC------HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 247 CVMGTEGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
V T Y AP+ + + +T D++S G + E++TG+
Sbjct: 180 VV--TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 128
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFG A G + ++ H +
Sbjct: 129 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 186 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE---WLA 131
++ ++F LG+G FGKV +R + A+K+L E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L +HP L L Y + RL V EY G L L + T
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
I +A L +LH + V+YRD K N++LD D + K++DFGL +G + T C G
Sbjct: 114 IVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC--G 167
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D + GVV+ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + L G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 127 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 184 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 86 YLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQLKHPHL 144
+LG+GGF K ++ + D + A + K L + Q RE ++ E+ L H H+
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 79
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP---WLTRIKIAIGAARCLAFLH 201
V G+ +++ +V E +L + + + T P + R +I +G +LH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH 134
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
VI+RD K N+ L+ D K+ DFGLAT + T C GT Y APE ++
Sbjct: 135 RNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLS 190
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
+ DV+S G ++ LL G+ E + C +E
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKE 224
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 86 YLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQLKHPHL 144
+LG+GGF K ++ + D + A + K L + Q RE ++ E+ L H H+
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 83
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP---WLTRIKIAIGAARCLAFLH 201
V G+ +++ +V E +L + + + T P + R +I +G +LH
Sbjct: 84 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH 138
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
VI+RD K N+ L+ D K+ DFGLAT + T C GT Y APE ++
Sbjct: 139 RNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLS 194
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
+ DV+S G ++ LL G+ E + C +E
Sbjct: 195 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKE 228
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 133
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFG A G + ++ H +
Sbjct: 134 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 191 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE---WLA 131
++ ++F LG+G FGKV +R + A+K+L E +
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 57
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L +HP L L Y + RL V EY G L L + T
Sbjct: 58 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 116
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
I +A L +LH + V+YRD K N++LD D + K++DFGL +G + T C G
Sbjct: 117 IVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC--G 170
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D + GVV+ E++ GR
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE---WLA 131
++ ++F LG+G FGKV +R + A+K+L E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L +HP L L Y + RL V EY G L L + T
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
I +A L +LH + V+YRD K N++LD D + K++DFGL +G + T C G
Sbjct: 114 IVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC--G 167
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D + GVV+ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + LG G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFG A G + ++ H +
Sbjct: 127 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 184 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT-VAVKVL-DVNGSQGHREWLAEVIFLG 137
F + L G FG VYKG + G K + VA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSST-----LPWLTRIKIAIG 192
+ +PH+ L+G C +L+ + M G L D + ++ + L W +I
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 133
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT-DGPQGEDSHITTCVMGT 251
A+ + +L E++ +++RD A N+L+ + + K++DFGLA G + ++ H +
Sbjct: 134 -AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
+ + A E I T DV+S+GV + EL+T
Sbjct: 191 K-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--------QGHREW-L 130
N+ + LG G V + C+ +P K AVK++DV G Q RE L
Sbjct: 18 NYEPKEILGRG-VSSVVRRCIH---KPTCKE--YAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 131 AEVIFLGQLK-HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
EV L ++ HP+++ L + LV++ M G L D L + + + +I
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
A+ C LH + +++RD K NILLD D N KL+DFG + GE V
Sbjct: 132 ALLEVICA--LH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVC 184
Query: 250 GTEGYAAPEYI----NTGH--LTTMCDVFSFGVVLLELLTG 284
GT Y APE I N H D++S GV++ LL G
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 100/222 (45%), Gaps = 29/222 (13%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--------QGHREW- 129
N+ + LG G V + C+ +P K AVK++DV G Q RE
Sbjct: 4 ENYEPKEILGRG-VSSVVRRCIH---KPTCKE--YAVKIIDVTGGGSFSAEEVQELREAT 57
Query: 130 LAEVIFLGQLK-HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIK 188
L EV L ++ HP+++ L + LV++ M G L D L + + + +I
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A+ C LH + +++RD K NILLD D N KL+DFG + GE V
Sbjct: 118 RALLEVICA--LH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREV 170
Query: 249 MGTEGYAAPEYI----NTGH--LTTMCDVFSFGVVLLELLTG 284
GT Y APE I N H D++S GV++ LL G
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 86 YLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQLKHPHL 144
+LG+GGF K ++ + D + A + K L + Q RE ++ E+ L H H+
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 79
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP---WLTRIKIAIGAARCLAFLH 201
V G+ +++ +V E +L + + + T P + R +I +G +LH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH 134
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
VI+RD K N+ L+ D K+ DFGLAT + T C GT Y APE ++
Sbjct: 135 RNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLS 190
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
+ DV+S G ++ LL G+ E + C +E
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKE 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 112/276 (40%), Gaps = 42/276 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL--DVNGSQGHREWLAEVIFLGQLKHPHL 144
LG G +G V K +R Q +AVK + VN + R + I + + P
Sbjct: 15 LGRGAYGVVEK------MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 145 VNLIGYCCEDEHRLLVYEYM--ALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
V G + + E M +L + Q+ + T+P KIA+ + L LH
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFG----LATDGPQGEDSHITTCVMGTEGYAAPE 258
+ VI+RD K SN+L+++ K+ DFG L D + D+ G + Y APE
Sbjct: 128 KLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA-------GCKPYMAPE 179
Query: 259 YI----NTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLD 314
I N + D++S G+ ++EL R + W P F +L
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTP----FQQLK 224
Query: 315 QIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPT 350
Q+++ + + + QCL N K RPT
Sbjct: 225 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 260
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 92/222 (41%), Gaps = 22/222 (9%)
Query: 76 MITHNFSRSDY-----LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL---DVNGSQGHR 127
++T +F+ D+ LG+G FG VY R VA+KVL +
Sbjct: 15 ILTRHFTIDDFEIGRPLGKGKFGNVYLA------REKKSHFIVALKVLFKSQIEKEGVEH 68
Query: 128 EWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRI 187
+ E+ L HP+++ L Y + L+ EY G L+ +L K S T
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK--SCTFDEQRTA 126
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTC 247
I A L + HG K VI+RD K N+LL K++DFG + P T C
Sbjct: 127 TIMEELADALMYCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK--TMC 182
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVE 289
GT Y PE I D++ GV+ ELL G E
Sbjct: 183 --GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 28/282 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
+G+G FGKV V N + A K V ++ R E+ + L+HP LVN
Sbjct: 23 IGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEV-RNVFKELQIMQGLEHPFLVN 79
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKP 206
L ++E +V + + G+L L +N +K+ I +A + + +
Sbjct: 80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE---ETVKLFI-CELVMALDYLQNQR 135
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINT---G 263
+I+RD K NILLD + ++DF +A P+ ++ ITT + GT+ Y APE ++
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MAGTKPYMAPEMFSSRKGA 192
Query: 264 HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLED 323
+ D +S GV ELL GRR K++V +
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV--------------- 237
Query: 324 RYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLN 365
Y + ++ + ++ + L NP R + + V+ + D+N
Sbjct: 238 TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN 279
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQ 138
+ S+++ LG G FG+V+K C + GLK +A K++ G + E E+ + Q
Sbjct: 89 YTVSKTEILGGGRFGQVHK-C--EETATGLK---LAAKIIKTRGMKDKEEVKNEISVMNQ 142
Query: 139 LKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
L H +L+ L +LV EY+ G L D++ + S L L I C
Sbjct: 143 LDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII-DESYNLTELD--TILFMKQICEG 199
Query: 199 FLHGEEKPVIYRDFKASNIL-LDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
H + +++ D K NIL ++ D K+ DFGLA E + GT + A
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLA 256
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE +N ++ D++S GV+ LL+G
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 42/232 (18%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+F LG+G FG+V K R L ++ A+K + + + L+EV+ L L
Sbjct: 7 DFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 140 KHPHLVNLIGYCCEDEHRLLV---------------YEYMALGNLHDQLF-KNYSSTLPW 183
H ++V Y E R V EY G L+D + +N +
Sbjct: 60 NHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 184 LTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGED-- 241
R+ I A L+++H + +I+RD K NI +D N K+ DFGLA + + D
Sbjct: 118 YWRLFRQILEA--LSYIHSQ--GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 242 ----------SHITTCVMGTEGYAAPEYIN-TGHLTTMCDVFSFGVVLLELL 282
S T +GT Y A E ++ TGH D++S G++ E++
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 85 DYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDV---NGSQG--HREWLAEVIFLGQL 139
+ +G+G F V + C++ Q AVK++DV S G + E L
Sbjct: 30 EVIGKGAFS-VVRRCINRE-----TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
KHPH+V L+ D +V+E+M +L ++ K + + + A
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
+ + +I+RD K N+LL S N+ KL DFG+A GE + +GT + A
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGTPHFMA 201
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE + DV+ GV+L LL+G
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 122/304 (40%), Gaps = 41/304 (13%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLG 137
+N LG G FGKV + L VAVK+L +E L +E+ +
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 89
Query: 138 QL-KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTL--------------- 181
L +H ++VNL+G C L++ EY G+L + L + + L
Sbjct: 90 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK 149
Query: 182 ----PWLTR--IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD 235
P R + + A+ +AFL K I+RD A N+LL + + AK+ DFGLA D
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 236 GPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKR 295
+ + + APE I T DV+S+G++L E+ S+ N
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN---- 259
Query: 296 EKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVV 355
P + +K +++ + K + ++ C + P RPT +
Sbjct: 260 -------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 312
Query: 356 KALE 359
L+
Sbjct: 313 SFLQ 316
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 47/230 (20%)
Query: 75 QMITHNFSRSDY---LGE-GGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL 130
+ +T + + D+ +GE G FGKVYK N + A A KV+D + +++
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKA---QNKETSVLA---AAKVIDTKSEEELEDYM 55
Query: 131 AEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E+ L HP++V L+ + + ++ E+ A G + + + LT +I
Sbjct: 56 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQ 111
Query: 191 IGAAR---CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGP----QGEDSH 243
+ + L +LH + +I+RD KA NIL D + KL+DFG++ Q DS
Sbjct: 112 VVCKQTLDALNYLH--DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSF 169
Query: 244 ITTCVMGTEGYAAPEYINTGHLTTMC------------DVFSFGVVLLEL 281
I GT + APE + MC DV+S G+ L+E+
Sbjct: 170 I-----GTPYWMAPEVV-------MCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTV--AVKVLDVNG---SQGHREWLAEV-IFLGQLK 140
+G+G FGKV L KA+ V AVKVL + + ++E + L +K
Sbjct: 46 IGKGSFGKV--------LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
HP LV L + V +Y+ G L L + P I +A L +L
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASA--LGYL 155
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
H ++YRD K NILLDS + L+DFGL + + + T C GT Y APE +
Sbjct: 156 HSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC--GTPEYLAPEVL 211
Query: 261 NTGHLTTMCDVFSFGVVLLELLTG 284
+ D + G VL E+L G
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKHPHL 144
LG+G F V + CV L Q A K+++ ++ H++ E LKHP++
Sbjct: 30 LGKGAFS-VVRRCVK-----VLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNL-HDQLFKNYSSTLPWLTRIKIAIGAARCL-----A 198
V L E+ H L+++ + G L D + + Y S A+ C+ A
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE----------ADASHCIQQILEA 133
Query: 199 FLHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
LH + V++RD K N+LL S KL+DFGLA + +GE GT GY
Sbjct: 134 VLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE-VEGE-QQAWFGFAGTPGYL 191
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ GV+L LL G
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 33/294 (11%)
Query: 98 GCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGY----CCE 153
GCV + L + VAVK+ + Q + EV L +KH +++ IG
Sbjct: 38 GCV---WKAQLLNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTSV 93
Query: 154 DEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE-------EKP 206
D L+ + G+L D L N S W IA AR LA+LH + KP
Sbjct: 94 DVDLWLITAFHEKGSLSDFLKANVVS---WNELCHIAETMARGLAYLHEDIPGLKDGHKP 150
Query: 207 VI-YRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTG-- 263
I +RD K+ N+LL ++ A ++DFGLA G+ + T +GT Y APE +
Sbjct: 151 AISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAIN 210
Query: 264 ---HLTTMCDVFSFGVVLLELLT----GRRSVEKNRCKREKDLVEWARPMLKDFTKLDQI 316
D+++ G+VL EL + V++ E+++ + P L+D ++
Sbjct: 211 FQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ--HPSLEDMQEVVVH 268
Query: 317 IDSR--LEDRYSTE-GAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDLNDI 367
R L D + G L +C H+ ++R + V + + + L +I
Sbjct: 269 KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTNI 322
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG---HREWLAEVIFLGQLKHPH 143
LG GGFG+V+ + + + ++ G QG ++ LA+V H
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HSR 245
Query: 144 LVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL-H 201
+ + Y E + L LV M G++ ++ N P + A+ ++ L H
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
++ +IYRD K N+LLD D N ++SD GLA + G+ T GT G+ APE +
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
Query: 262 TGHLTTMCDVFSFGVVLLELLTGR 285
D F+ GV L E++ R
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG---HREWLAEVIFLGQLKHPH 143
LG GGFG+V+ + + + ++ G QG ++ LA+V H
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HSR 245
Query: 144 LVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL-H 201
+ + Y E + L LV M G++ ++ N P + A+ ++ L H
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
++ +IYRD K N+LLD D N ++SD GLA + G+ T GT G+ APE +
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
Query: 262 TGHLTTMCDVFSFGVVLLELLTGR 285
D F+ GV L E++ R
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG---HREWLAEVIFLGQLKHPH 143
LG GGFG+V+ + + + ++ G QG ++ LA+V H
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HSR 245
Query: 144 LVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL-H 201
+ + Y E + L LV M G++ ++ N P + A+ ++ L H
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
++ +IYRD K N+LLD D N ++SD GLA + G+ T GT G+ APE +
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
Query: 262 TGHLTTMCDVFSFGVVLLELLTGR 285
D F+ GV L E++ R
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 86 YLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQLKHPHL 144
+LG+GGF K ++ + D + A + K L + Q RE ++ E+ L H H+
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 103
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP---WLTRIKIAIGAARCLAFLH 201
V G+ +++ +V E +L + + + T P + R +I +G +LH
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH 158
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
VI+RD K N+ L+ D K+ DFGLAT + C GT Y APE ++
Sbjct: 159 RNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLS 214
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
+ DV+S G ++ LL G+ E + C +E
Sbjct: 215 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKE 248
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 86 YLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQLKHPHL 144
+LG+GGF K ++ + D + A + K L + Q RE ++ E+ L H H+
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 101
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP---WLTRIKIAIGAARCLAFLH 201
V G+ +++ +V E +L + + + T P + R +I +G +LH
Sbjct: 102 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH 156
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
VI+RD K N+ L+ D K+ DFGLAT + C GT Y APE ++
Sbjct: 157 RNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLS 212
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
+ DV+S G ++ LL G+ E + C +E
Sbjct: 213 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKE 246
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQG---HREWLAEVIFLGQLKHPH 143
LG GGFG+V+ + + + ++ G QG ++ LA+V H
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HSR 245
Query: 144 LVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL-H 201
+ + Y E + L LV M G++ ++ N P + A+ ++ L H
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
++ +IYRD K N+LLD D N ++SD GLA + G+ T GT G+ APE +
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
Query: 262 TGHLTTMCDVFSFGVVLLELLTGR 285
D F+ GV L E++ R
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE---WLA 131
++ + F LG+G FGKV ++ + A+K+L E L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLT 59
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L +HP L L Y + RL V EY G L L + +
Sbjct: 60 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 118
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
I +A L +LH E K V+YRD K N++LD D + K++DFGL +G + D G
Sbjct: 119 IVSA--LDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCG 173
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D + GVV+ E++ GR
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE---WLA 131
++ + F LG+G FGKV ++ + A+K+L E L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLT 58
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L +HP L L Y + RL V EY G L L + +
Sbjct: 59 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
I +A L +LH E K V+YRD K N++LD D + K++DFGL +G + D G
Sbjct: 118 IVSA--LDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCG 172
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D + GVV+ E++ GR
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE---WLA 131
++ + F LG+G FGKV ++ + A+K+L E L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLT 57
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L +HP L L Y + RL V EY G L L + +
Sbjct: 58 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 116
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
I +A L +LH E K V+YRD K N++LD D + K++DFGL +G + D G
Sbjct: 117 IVSA--LDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCG 171
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D + GVV+ E++ GR
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
K+ + I + D LG G F +V D + + + +A K L+ G +G E
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVIL-AEDKRTQKLVAIKCIAKKALE--GKEGSME--N 65
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L ++KHP++V L H L+ + ++ G L D++ + T +R+ +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNIL---LDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A + +LH + +++RD K N+L LD D +SDFGL+ G + +
Sbjct: 126 LDA--VKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTA 178
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GT GY APE + + D +S GV+ LL G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 61/299 (20%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+F + +G GGFG+V+K + + +T +K + N + RE V L +L
Sbjct: 12 DFKEIELIGSGGFGQVFKA------KHRIDGKTYVIKRVKYNNEKAERE----VKALAKL 61
Query: 140 KHPHLVNLIG------YCCEDEHR----------LLVYEYMALGNLHDQLFKNYSSTLPW 183
H ++V+ G Y E + + E+ G L + K L
Sbjct: 62 DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 184 LTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT----DGPQG 239
+ +++ + + ++H K +I RD K SNI L K+ DFGL T DG +
Sbjct: 122 VLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX 179
Query: 240 EDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDL 299
GT Y +PE I++ D+++ G++L ELL +
Sbjct: 180 RSK-------GTLRYMSPEQISSQDYGKEVDLYALGLILAELL---------------HV 217
Query: 300 VEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKAL 358
+ A K FT L I S + D K+ + + LS P+ RP + +++ L
Sbjct: 218 CDTAFETSKFFTDLRDGIISDIFD-------KKEKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE---WLA 131
++ ++F LG+G FGKV +R + A+K+L E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L +HP L L Y + RL V EY G L L + T
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
I +A L +LH + V+YRD K N++LD D + K++DFGL +G + C G
Sbjct: 114 IVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC--G 167
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D + GVV+ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE---WLA 131
++ ++F LG+G FGKV +R + A+K+L E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L +HP L L Y + RL V EY G L L + T
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
I +A L +LH + V+YRD K N++LD D + K++DFGL +G + C G
Sbjct: 114 IVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC--G 167
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D + GVV+ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 86 YLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIFLGQLKHPHL 144
+LG+GGF K ++ + D + A + K L + Q RE ++ E+ L H H+
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ--REKMSMEISIHRSLAHQHV 77
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLP---WLTRIKIAIGAARCLAFLH 201
V G+ +++ +V E +L + + + T P + R +I +G +LH
Sbjct: 78 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLH 132
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
VI+RD K N+ L+ D K+ DFGLAT + C GT Y APE ++
Sbjct: 133 RNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLS 188
Query: 262 TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
+ DV+S G ++ LL G+ E + C +E
Sbjct: 189 KKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKE 222
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE---WLA 131
++ ++F LG+G FGKV +R + A+K+L E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L +HP L L Y + RL V EY G L L + T
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
I +A L +LH + V+YRD K N++LD D + K++DFGL +G + C G
Sbjct: 114 IVSA--LEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC--G 167
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D + GVV+ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE---WLA 131
++ ++F LG+G FGKV +R + A+K+L E +
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 59
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
E L +HP L L Y + RL V EY G L L + T
Sbjct: 60 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 118
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
I +A L +LH + V+YRD K N++LD D + K++DFGL +G + C G
Sbjct: 119 IVSA--LEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC--G 172
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE + D + GVV+ E++ GR
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 71 LKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD----VNGSQGH 126
+++L+M ++ +G G FG+V +R + A+K+L + S
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQL------VRHKSTRKVYAMKLLSKFEMIKRSDSA 114
Query: 127 REWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPW--- 183
W E + P +V L +D + +V EYM G+L + L NY W
Sbjct: 115 FFW-EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF 172
Query: 184 -LTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDS 242
+ +A+ A + F+H RD K N+LLD + KL+DFG +
Sbjct: 173 YTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224
Query: 243 HITTCVMGTEGYAAPEYINT----GHLTTMCDVFSFGVVLLELLTG 284
T V GT Y +PE + + G+ CD +S GV L E+L G
Sbjct: 225 RCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 71 LKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD----VNGSQGH 126
+++L+M ++ +G G FG+V +R + A+K+L + S
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQL------VRHKSTRKVYAMKLLSKFEMIKRSDSA 119
Query: 127 REWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPW--- 183
W E + P +V L +D + +V EYM G+L + L NY W
Sbjct: 120 FFW-EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF 177
Query: 184 -LTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDS 242
+ +A+ A + F+H RD K N+LLD + KL+DFG +
Sbjct: 178 YTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 243 HITTCVMGTEGYAAPEYINT----GHLTTMCDVFSFGVVLLELLTG 284
T V GT Y +PE + + G+ CD +S GV L E+L G
Sbjct: 230 RCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 71 LKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD----VNGSQGH 126
+++L+M ++ +G G FG+V +R + A+K+L + S
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQL------VRHKSTRKVYAMKLLSKFEMIKRSDSA 119
Query: 127 REWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPW--- 183
W E + P +V L +D + +V EYM G+L + L NY W
Sbjct: 120 FFW-EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF 177
Query: 184 -LTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDS 242
+ +A+ A + F+H RD K N+LLD + KL+DFG +
Sbjct: 178 YTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 243 HITTCVMGTEGYAAPEYINT----GHLTTMCDVFSFGVVLLELLTG 284
T V GT Y +PE + + G+ CD +S GV L E+L G
Sbjct: 230 RCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDV----NGSQG-HREWLAEVIF 135
+ + D+LGEG F VYK R Q VA+K + + G +R L E+
Sbjct: 12 YEKLDFLGEGQFATVYKA------RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
L +L HP+++ L+ + LV+++M + + K+ S L + +
Sbjct: 66 LQELSHPNIIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L +LH + +++RD K +N+LLD + KL+DFGLA ++ V T Y
Sbjct: 124 GLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYR 179
Query: 256 APEYINTGHLTTM-CDVFSFGVVLLELL 282
APE + + + D+++ G +L ELL
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 105/250 (42%), Gaps = 47/250 (18%)
Query: 53 SLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQT 112
SL+E+ S + +F L EL +G G +G+VYKG R Q
Sbjct: 10 SLDEIDLSALRDPAGIFELVEL------------VGNGTYGQVYKG------RHVKTGQL 51
Query: 113 VAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCE---------DEHRLLVYEY 163
A+KV+DV G + E E+ L K+ H N+ Y D+ LV E+
Sbjct: 52 AAIKVMDVTGDE-EEEIKQEINMLK--KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108
Query: 164 MALGNLHDQLFKNYSSTLP--WLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDS 221
G++ D + +TL W+ I I R L+ LH + VI+RD K N+LL
Sbjct: 109 CGAGSVTDLIKNTKGNTLKEEWIAYICREI--LRGLSHLH--QHKVIHRDIKGQNVLLTE 164
Query: 222 DYNAKLSDFGLAT--DGPQGEDSHITTCVMGTEGYAAPEYINTGH-----LTTMCDVFSF 274
+ KL DFG++ D G +GT + APE I D++S
Sbjct: 165 NAEVKLVDFGVSAQLDRTVGR----RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSL 220
Query: 275 GVVLLELLTG 284
G+ +E+ G
Sbjct: 221 GITAIEMAEG 230
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 74 LQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEV 133
Q ++ + R LG G +G+V D L +A + +K V + L EV
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVL--LCKDKLTGAERAIKI-IKKSSVTTTSNSGALLDEV 72
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGA 193
L QL HP+++ L + + + LV E G L D++ + + A+
Sbjct: 73 AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIM 127
Query: 194 ARCLA---FLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTC 247
+ L+ +LH + +++RD K N+LL+S D K+ DFGL+ G
Sbjct: 128 KQVLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER-- 183
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+GT Y APE + + CDV+S GV+L LL G
Sbjct: 184 -LGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 218
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 40/224 (17%)
Query: 90 GGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAE--VIFLGQLKHPHLVNL 147
G FG V+K + ++ VAVK+ + Q W +E + +KH +L+
Sbjct: 26 GRFGCVWKAQLMNDF--------VAVKIFPLQDKQS---WQSEREIFSTPGMKHENLLQF 74
Query: 148 IGYCCEDEHRLLVYEYMALGNLHDQ-LFKNY--SSTLPWLTRIKIAIGAARCLAFLH--- 201
I E L E + HD+ +Y + + W +A +R L++LH
Sbjct: 75 IA--AEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDV 132
Query: 202 ------GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
G + + +RDFK+ N+LL SD A L+DFGLA G+ T +GT Y
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 256 APEYINTG-----HLTTMCDVFSFGVVLLELLTGRRSVEKNRCK 294
APE + D+++ G+VL EL++ RCK
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELVS--------RCK 228
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 187 IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
+ I I A + FLH K +++RD K SNI D K+ DFGL T Q E+
Sbjct: 167 LHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 247 CVM----------GTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
M GT+ Y +PE I+ + + D+FS G++L ELL S + R +
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS-FSTQMERVRII 283
Query: 297 KDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
D+ P+L FT+ +Y E + LS +P RP T +++
Sbjct: 284 TDVRNLKFPLL--FTQ-----------KYPQEH-----MMVQDMLSPSPTERPEATDIIE 325
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 42/232 (18%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+F LG+G FG+V K R L ++ A+K + + + L+EV+ L L
Sbjct: 7 DFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 140 KHPHLVNLIGYCCEDEHRLLV---------------YEYMALGNLHDQLF-KNYSSTLPW 183
H ++V Y E R V EY L+D + +N +
Sbjct: 60 NHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 184 LTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGED-- 241
R+ I A L+++H + +I+RD K NI +D N K+ DFGLA + + D
Sbjct: 118 YWRLFRQILEA--LSYIHSQ--GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 242 ----------SHITTCVMGTEGYAAPEYIN-TGHLTTMCDVFSFGVVLLELL 282
S T +GT Y A E ++ TGH D++S G++ E++
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
K+ + I + D LG G F +V D + + + +A + L+ G +G E
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKEALE--GKEGSME--N 65
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L ++KHP++V L H L+ + ++ G L D++ + T +R+ +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNIL---LDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A + +LH + +++RD K N+L LD D +SDFGL+ G + +
Sbjct: 126 LDA--VKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTA 178
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GT GY APE + + D +S GV+ LL G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
K+ + I + D LG G F +V D + + + +A + L+ G +G E
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKEALE--GKEGSME--N 65
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L ++KHP++V L H L+ + ++ G L D++ + T +R+ +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNIL---LDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A + +LH + +++RD K N+L LD D +SDFGL+ G + +
Sbjct: 126 LDA--VKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTA 178
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GT GY APE + + D +S GV+ LL G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVI 134
T + + LG+G F V + CV L Q A +++ ++ H++ E
Sbjct: 9 FTEEYQLFEELGKGAFS-VVRRCVK-----VLAGQEYAAMIINTKKLSARDHQKLEREAR 62
Query: 135 FLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL-HDQLFKNYSSTLPWLTRIKIAIGA 193
LKHP++V L E+ H L+++ + G L D + + Y S A
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE----------ADA 112
Query: 194 ARCL-----AFLHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHIT 245
+ C+ A LH + V++R+ K N+LL S KL+DFGLA + +GE
Sbjct: 113 SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE-VEGE-QQAW 170
Query: 246 TCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GT GY +PE + D+++ GV+L LL G
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN-GSQGH-----REWLAEVIFLGQLK 140
+GEG +GKV+K +L+ G + VA+K + V G +G RE +A + L +
Sbjct: 19 IGEGAYGKVFKA---RDLKNG--GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFE 72
Query: 141 HPHLVNLIGYCC----EDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
HP++V L C + E +L LV+E++ +L L K +P T + R
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L FLH V++RD K NIL+ S KL+DFGLA T V+ T Y
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWYR 186
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELL 282
APE + T D++S G + E+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
K+ + I + D LG G F +V D + + + +A + L+ G +G E
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKEALE--GKEGSME--N 65
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L ++KHP++V L H L+ + ++ G L D++ + T +R+ +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNIL---LDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
A + +LH + +++RD K N+L LD D +SDFGL+ G + +
Sbjct: 126 LDA--VKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTA 178
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GT GY APE + + D +S GV+ LL G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 64 SNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS 123
NL+ + T ++ + LG+G F V + CV A+ + K L +
Sbjct: 16 ENLYFQXMATCTRFTDDYQLFEELGKGAFS-VVRRCVKKTPTQEYAAKIINTKKL---SA 71
Query: 124 QGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL-HDQLFKNYSSTLP 182
+ H++ E LKHP++V L E+ LV++ + G L D + + Y S
Sbjct: 72 RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-- 129
Query: 183 WLTRIKIAIGAARCLAFL-----HGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLAT 234
A+ C+ + H + +++RD K N+LL S KL+DFGLA
Sbjct: 130 --------ADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
Query: 235 DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ QGE GT GY +PE + D+++ GV+L LL G
Sbjct: 182 E-VQGE-QQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 80 NFSRSDYLGEGGFGKVY---KGCVDDNLR----PGLKAQTVAVKVLDVNGSQGHREWLAE 132
NF LG G +GKV+ K D + LK T+ K ++ R+ L
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 133 VIFLGQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
+ + P LV L Y + E +L L+ +Y+ G L L + T ++I +
Sbjct: 115 I-----RQSPFLVTL-HYAFQTETKLHLILDYINGGELFTHLSQRERFTE---HEVQIYV 165
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
G LA H + +IYRD K NILLDS+ + L+DFGL+ + +++ GT
Sbjct: 166 GEI-VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-ADETERAYDFCGT 223
Query: 252 EGYAAPEYI---NTGHLTTMCDVFSFGVVLLELLTG 284
Y AP+ + ++GH D +S GV++ ELLTG
Sbjct: 224 IEYMAPDIVRGGDSGH-DKAVDWWSLGVLMYELLTG 258
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 87 LGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP 142
LG G FG V ++G D VA+K++ GS E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
LV L G C + ++ EYMA G L + L + + T+ + + C A +
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYL 136
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEY 259
E K ++RD A N L++ K+SDFGL+ E+ T +G++ ++ PE
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE----TSSVGSKFPVRWSPPEV 192
Query: 260 INTGHLTTMCDVFSFGVVLLELLT 283
+ ++ D+++FGV++ E+ +
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN-GSQGH-----REWLAEVIFLGQLK 140
+GEG +GKV+K +L+ G + VA+K + V G +G RE +A + L +
Sbjct: 19 IGEGAYGKVFKA---RDLKNG--GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFE 72
Query: 141 HPHLVNLIGYCC----EDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
HP++V L C + E +L LV+E++ +L L K +P T + R
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L FLH V++RD K NIL+ S KL+DFGLA T V+ T Y
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWYR 186
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELL 282
APE + T D++S G + E+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN-GSQGH-----REWLAEVIFLGQLK 140
+GEG +GKV+K +L+ G + VA+K + V G +G RE +A + L +
Sbjct: 19 IGEGAYGKVFKA---RDLKNG--GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFE 72
Query: 141 HPHLVNLIGYCC----EDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
HP++V L C + E +L LV+E++ +L L K +P T + R
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L FLH V++RD K NIL+ S KL+DFGLA T V+ T Y
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLWYR 186
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELL 282
APE + T D++S G + E+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 87/213 (40%), Gaps = 19/213 (8%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL--DVNGSQGHREWLAEVI 134
+ + + +GEG +G V+K D Q VA+K + + L E+
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDT------GQIVAIKKFLESEDDPVIKKIALREIR 54
Query: 135 FLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA 194
L QLKHP+LVNL+ LV+EY LH+ Y +P I
Sbjct: 55 MLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVKSITWQTL 112
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT--DGPQGEDSHITTCVMGTE 252
+ + F H I+RD K NIL+ KL DFG A GP S + T
Sbjct: 113 QAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGP----SDYYDDEVATR 166
Query: 253 GYAAPE-YINTGHLTTMCDVFSFGVVLLELLTG 284
Y +PE + DV++ G V ELL+G
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 74/312 (23%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+F + +G GGFG+V+K + + +T ++ + N + RE A L +L
Sbjct: 13 DFKEIELIGSGGFGQVFKA------KHRIDGKTYVIRRVKYNNEKAEREVKA----LAKL 62
Query: 140 KHPHLVNLIG--------------------YCCEDEHR---------LLVYEYMALGNLH 170
H ++V+ G Y E+ + E+ G L
Sbjct: 63 DHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLE 122
Query: 171 DQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDF 230
+ K L + +++ + + ++H K +I+RD K SNI L K+ DF
Sbjct: 123 QWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 231 GLAT----DGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRR 286
GL T DG + T GT Y +PE I++ D+++ G++L ELL
Sbjct: 181 GLVTSLKNDGKR-------TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH--- 230
Query: 287 SVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPK 346
+ + A K FT L I S + D K+ + + LS P+
Sbjct: 231 ------------VCDTAFETSKFFTDLRDGIISDIFD-------KKEKTLLQKLLSKKPE 271
Query: 347 SRPTMTTVVKAL 358
RP + +++ L
Sbjct: 272 DRPNTSEILRTL 283
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 118/289 (40%), Gaps = 48/289 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKHPHL 144
L E G+++KG N + VKVL V ++ R++ E L HP++
Sbjct: 18 LNENHSGELWKGRWQGN--------DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 145 VNLIGYCCEDE--HRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
+ ++G C H L+ +M G+L++ L + + + +K A+ AR +AFLH
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT 129
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLS--DFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
E + + ++++D D A++S D + P M + APE +
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR---------MYAPAWVAPEAL 180
Query: 261 NTGHLTT---MCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQII 317
T D++SF V+L EL+T R V D + ++ +
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVT--REVP-----------------FADLSNMEIGM 221
Query: 318 DSRLEDRYSTEG---AKRLAAVAHQCLSHNPKSRPTMTTVVKALEPLLD 363
LE T + ++ + C++ +P RP +V LE + D
Sbjct: 222 KVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGS--QGHREWLAEVIFLGQLKHPHL 144
+G G G+V+K +R +AVK + +G+ + R + + L P++
Sbjct: 33 MGSGTCGQVWK------MRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI 86
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGEE 204
V G + + E M G ++L K +P K+ + + L +L E+
Sbjct: 87 VQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK-EK 143
Query: 205 KPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGH 264
VI+RD K SNILLD KL DFG++ + D G Y APE I+
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISG---RLVDDKAKDRSAGCAAYMAPERIDPPD 200
Query: 265 LTT-----MCDVFSFGVVLLELLTGR 285
T DV+S G+ L+EL TG+
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 87 LGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP 142
LG G FG V ++G D VA+K++ GS E++ E + L H
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 59
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
LV L G C + ++ EYMA G L + L + + T+ + + C A +
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYL 116
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEY 259
E K ++RD A N L++ K+SDFGL+ E T +G++ ++ PE
Sbjct: 117 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSSVGSKFPVRWSPPEV 172
Query: 260 INTGHLTTMCDVFSFGVVLLELLT 283
+ ++ D+++FGV++ E+ +
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 87 LGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP 142
LG G FG V ++G D VA+K++ GS E++ E + L H
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 63
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
LV L G C + ++ EYMA G L + L + + T+ + + C A +
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYL 120
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEY 259
E K ++RD A N L++ K+SDFGL+ E T +G++ ++ PE
Sbjct: 121 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSSVGSKFPVRWSPPEV 176
Query: 260 INTGHLTTMCDVFSFGVVLLELLT 283
+ ++ D+++FGV++ E+ +
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
++ + R LG G +G+V D L +A + +K V + L EV L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVL--LCKDKLTGAERAIKI-IKKSSVTTTSNSGALLDEVAVL 58
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
QL HP+++ L + + + LV E G L D++ + + A+ +
Sbjct: 59 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQV 113
Query: 197 LA---FLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTCVMG 250
L+ +LH + +++RD K N+LL+S D K+ DFGL+ G +G
Sbjct: 114 LSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER---LG 168
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
T Y APE + + CDV+S GV+L LL G
Sbjct: 169 TAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 87 LGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP 142
LG G FG V ++G D VA+K++ GS E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
LV L G C + ++ EYMA G L + L + + T+ + + C A +
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYL 136
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEY 259
E K ++RD A N L++ K+SDFGL+ E T +G++ ++ PE
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSSVGSKFPVRWSPPEV 192
Query: 260 INTGHLTTMCDVFSFGVVLLELLT 283
+ ++ D+++FGV++ E+ +
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 39/225 (17%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVK-VLDV--NGSQGHREWLAEVIFLGQLK-HP 142
LG+G +G V+K + R G + VAVK + D N + R + E++ L +L H
Sbjct: 17 LGKGAYGIVWKSI---DRRTG---EVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHE 69
Query: 143 HLVNLIGYCCEDEHR--LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
++VNL+ D R LV++YM +LH + N L + + + + + +L
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYL 125
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQ-------------------GED 241
H +++RD K SNILL+++ + K++DFGL+ +D
Sbjct: 126 HS--GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 242 SHITTCVMGTEGYAAPEY-INTGHLTTMCDVFSFGVVLLELLTGR 285
I T + T Y APE + + T D++S G +L E+L G+
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA---EV 133
++ + + LG GG +V+ + +LR + VAVKVL + ++ +L E
Sbjct: 10 LSDRYELGEILGFGGMSEVH---LARDLR---DHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 134 IFLGQLKHPHLVNL--IGYCCEDEHRL--LVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
L HP +V + G L +V EY+ L D + + P + I
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAI 119
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD-GPQGEDSHITTCV 248
+ A C A + +I+RD K +NIL+ + K+ DFG+A G T V
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAV 179
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+GT Y +PE + DV+S G VL E+LTG
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 87 LGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP 142
LG G FG V ++G D VA+K++ GS E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
LV L G C + ++ EYMA G L + L + + T+ + + C A +
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYL 121
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEY 259
E K ++RD A N L++ K+SDFGL+ E T +G++ ++ PE
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSSVGSKFPVRWSPPEV 177
Query: 260 INTGHLTTMCDVFSFGVVLLELLT 283
+ ++ D+++FGV++ E+ +
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 133/327 (40%), Gaps = 79/327 (24%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGC-VDDNLRPGLKAQTVAVKVLDVNGSQGHREWL 130
K+ + + LG+GGFG V+ G + D L+ VA+KV+ N G W
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQ-------VAIKVIPRNRVLG---WS 73
Query: 131 A---------EVIFLGQLK----HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNY 177
EV L ++ HP ++ L+ + E +LV E LF
Sbjct: 74 PLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQ---DLFDYI 130
Query: 178 SSTLPWLTRIKIAIGAARCL------AFLHGEEKPVIYRDFKASNILLDSDYN-AKLSDF 230
+ P + G +RC A H + V++RD K NIL+D AKL DF
Sbjct: 131 TEKGP------LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDF 184
Query: 231 G---LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTM-CDVFSFGVVLLELLTGRR 286
G L D P T GT Y+ PE+I+ + V+S G++L +++ G
Sbjct: 185 GSGALLHDEP-------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI 237
Query: 287 SVEKNRCKREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPK 346
E+++ +I+++ L + + A+ +CL+ P
Sbjct: 238 PFERDQ----------------------EILEAELH--FPAHVSPDCCALIRRCLAPKPS 273
Query: 347 SRPTMTTVVKALEPLLD--LNDIPIGP 371
SRP++ ++ L+P + D+P+ P
Sbjct: 274 SRPSLEEIL--LDPWMQTPAEDVPLNP 298
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD-VNGSQGHREWLAEVIF 135
I+ +F LGEG +G V C + G + VA+K ++ + L E+
Sbjct: 9 ISSDFQLKSLLGEGAYGVV---CSATHKPTG---EIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI-GAA 194
L KH +++ + D Y+ + L + S+ + I+ I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---------TDGPQGEDSHIT 245
R + LHG VI+RD K SN+L++S+ + K+ DFGLA P G+ S +T
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 246 TCVMGTEGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLV 300
V T Y APE + + + DV+S G +L EL RR + R R + L+
Sbjct: 181 EXV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 87 LGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP 142
LG G FG V ++G D VA+K++ GS E++ E + L H
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 70
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
LV L G C + ++ EYMA G L + L + + T+ + + C A +
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYL 127
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEY 259
E K ++RD A N L++ K+SDFGL+ E T +G++ ++ PE
Sbjct: 128 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSSVGSKFPVRWSPPEV 183
Query: 260 INTGHLTTMCDVFSFGVVLLELLT 283
+ ++ D+++FGV++ E+ +
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 31/218 (14%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL 139
F + + LG G + VYKG N G+ VA+K + ++ +G + E+ + +L
Sbjct: 7 FKQLEKLGNGTYATVYKGL---NKTTGV---YVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYM-----------ALGNLHDQLFKNYSSTLPWLTRIK 188
KH ++V L + LV+E+M +GN L N W
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW----- 115
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCV 248
+ LAF H E +++RD K N+L++ KL DFGLA G + +
Sbjct: 116 ---QLLQGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSE 168
Query: 249 MGTEGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
+ T Y AP+ + + +T D++S G +L E++TG+
Sbjct: 169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD-VNGSQGHREWLAEVIF 135
I+ +F LGEG +G V C + G + VA+K ++ + L E+
Sbjct: 9 ISSDFQLKSLLGEGAYGVV---CSATHKPTG---EIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI-GAA 194
L KH +++ + D Y+ + L + S+ + I+ I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---------TDGPQGEDSHIT 245
R + LHG VI+RD K SN+L++S+ + K+ DFGLA P G+ S +T
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 246 TCVMGTEGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLV 300
V T Y APE + + + DV+S G +L EL RR + R R + L+
Sbjct: 181 EYV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN-GSQGHREWLAEVIFLGQLKHPHLV 145
LGEG F + + CV Q AVK++ + +E A + G HP++V
Sbjct: 19 LGEGSFS-ICRKCVHKK-----SNQAFAVKIISKRMEANTQKEITALKLCEG---HPNIV 69
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQLFK--NYSSTLPWLTRIKIAIGAARCLAFLHGE 203
L + H LV E + G L +++ K ++S T K+ + H
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS------HMH 123
Query: 204 EKPVIYRDFKASNILL---DSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
+ V++RD K N+L + + K+ DFG A P T C T YAAPE +
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELL 181
Query: 261 NTGHLTTMCDVFSFGVVLLELLTGR 285
N CD++S GV+L +L+G+
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 26/204 (12%)
Query: 87 LGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP 142
LG G FG V ++G D VA+K++ GS E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
LV L G C + ++ EYMA G L + L + + T+ + + C A +
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYL 121
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE---GYAAPEY 259
E K ++RD A N L++ K+SDFGL+ E T G++ ++ PE
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSSRGSKFPVRWSPPEV 177
Query: 260 INTGHLTTMCDVFSFGVVLLELLT 283
+ ++ D+++FGV++ E+ +
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 41/262 (15%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLAEVI 134
++ + R LG G +G+V C R + A+K++ + + + L EV
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLL-C-----RDKVTHVERAIKIIRKTSVSTSSNSKLLEEVA 88
Query: 135 FLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA 194
L L HP+++ L + + + LV E G L D++ + A+
Sbjct: 89 VLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-----FNEVDAAVIIK 143
Query: 195 RCLA---FLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTCV 248
+ L+ +LH + +++RD K N+LL+S D K+ DFGL+ E+
Sbjct: 144 QVLSGVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA---VFENQKKMKER 198
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGR------------RSVEKNRCKRE 296
+GT Y APE + + CDV+S GV+L LL G R VEK + +
Sbjct: 199 LGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 297 ----KDLVEWARPMLKDFTKLD 314
K++ E A+ ++K + D
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFD 279
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA---EV 133
++ + + LG GG +V+ + +LR + VAVKVL + ++ +L E
Sbjct: 10 LSDRYELGEILGFGGMSEVH---LARDLR---DHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 134 IFLGQLKHPHLVNL--IGYCCEDEHRL--LVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
L HP +V + G L +V EY+ L D + + P + I
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAI 119
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD-GPQGEDSHITTCV 248
+ A C A + +I+RD K +NI++ + K+ DFG+A G T V
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+GT Y +PE + DV+S G VL E+LTG
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA---EV 133
++ + + LG GG +V+ + +LR + VAVKVL + ++ +L E
Sbjct: 10 LSDRYELGEILGFGGMSEVH---LARDLR---DHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 134 IFLGQLKHPHLVNL--IGYCCEDEHRL--LVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
L HP +V + G L +V EY+ L D + + P + I
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAI 119
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD-GPQGEDSHITTCV 248
+ A C A + +I+RD K +NI++ + K+ DFG+A G T V
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+GT Y +PE + DV+S G VL E+LTG
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 16/220 (7%)
Query: 69 FTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE 128
F + + N+ + LG+G F V + CV A+ + K L Q
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL-HDQLFKNYSSTLPWLTRI 187
E +L+HP++V L E+ LV++ + G L D + + + S I
Sbjct: 78 ---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 134
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHI 244
+ + +A+ H +++R+ K N+LL S KL+DFGLA + E H
Sbjct: 135 QQIL---ESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH- 188
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GT GY +PE + + D+++ GV+L LL G
Sbjct: 189 --GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA---EV 133
++ + + LG GG +V+ + +LR + VAVKVL + ++ +L E
Sbjct: 10 LSDRYELGEILGFGGMSEVH---LARDLR---LHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHR------LLVYEYMALGNLHDQLFKNYSSTLPWLTRI 187
L HP +V + Y + +V EY+ L D + + P +
Sbjct: 64 QNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKR 117
Query: 188 KIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD-GPQGEDSHITT 246
I + A C A + +I+RD K +NI++ + K+ DFG+A G T
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
V+GT Y +PE + DV+S G VL E+LTG
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 40/283 (14%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVK-VLDVNGSQGHREWLAEV-IFLGQLKHPHL 144
+G G +G V K +P Q +AVK + + ++ L ++ + + P++
Sbjct: 30 IGRGAYGSVNKMV----HKPS--GQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI 83
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTL----PWLTRIKIAIGAARCLAFL 200
V G + + E M+ D+ +K S L P KI + + L L
Sbjct: 84 VQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
E +I+RD K SNILLD N KL DFG++ Q DS T G Y APE I
Sbjct: 142 K-ENLKIIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTRDAGCRPYMAPERI 197
Query: 261 NTGH----LTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQI 316
+ DV+S G+ L EL TGR K W F +L Q+
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGRFPYPK-----------WNSV----FDQLTQV 242
Query: 317 IDS---RLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
+ +L + E + + CL+ + RP ++K
Sbjct: 243 VKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR-EWLAEVIFLGQL 139
+ + D LGEG + VYKG + L VA+K + + +G + EV L L
Sbjct: 4 YIKLDKLGEGTYATVYKG------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL 57
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNY---SSTLPWLTRIKIAI-GAAR 195
KH ++V L ++ LV+EY+ D+ K Y + + +K+ + R
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYL------DKDLKQYLDDCGNIINMHNVKLFLFQLLR 111
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
LA+ H ++ V++RD K N+L++ KL+DFGLA ++ V T Y
Sbjct: 112 GLAYCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYR 167
Query: 256 APE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
P+ + + +T D++ G + E+ TGR
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 18/233 (7%)
Query: 62 VGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVY-----KGCVDDNLRPGLKAQTVAVK 116
+ N ++ K+ I ++ + LG G +G+V G + ++ K+Q +
Sbjct: 19 IAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGR 78
Query: 117 VLDVNGS--QGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF 174
D N + + H E E+ L L HP+++ L + ++ LV E+ G L +Q+
Sbjct: 79 YSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII 138
Query: 175 KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSD---YNAKLSDFG 231
+ I I + C +LH + +++RD K NILL++ N K+ DFG
Sbjct: 139 NRHKFDECDAANIMKQILSGIC--YLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFG 194
Query: 232 LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
L++ + + +GT Y APE + + CDV+S GV++ LL G
Sbjct: 195 LSSFFSK---DYKLRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG-SQGHREWL-AEVIFLGQLKHPHL 144
+G G +G+ K +R + + K LD ++ ++ L +EV L +LKHP++
Sbjct: 14 IGTGSYGRCQK------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 145 VNLIGYCCEDEHRLL--VYEYMALGNL--------HDQLFKNYSSTLPWLTRIKIAIGAA 194
V + + L V EY G+L ++ + + L +T++ +A+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL--K 125
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
C G V++RD K +N+ LD N KL DFGLA D+ +GT Y
Sbjct: 126 ECHRRSDGGH-TVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFVGTPYY 182
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLEL 281
+PE +N D++S G +L EL
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA---EV 133
++ + + LG GG +V+ + +LR + VAVKVL + ++ +L E
Sbjct: 10 LSDRYELGEILGFGGMSEVH---LARDLR---LHRDVAVKVLRADLARDPSFYLRFRREA 63
Query: 134 IFLGQLKHPHLVNL--IGYCCEDEHRL--LVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
L HP +V + G L +V EY+ L D + + P + I
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAI 119
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD-GPQGEDSHITTCV 248
+ A C A + +I+RD K +NI++ + K+ DFG+A G T V
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+GT Y +PE + DV+S G VL E+LTG
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG-SQGHREWL-AEVIFLGQLKHPHL 144
+G G +G+ K +R + + K LD ++ ++ L +EV L +LKHP++
Sbjct: 14 IGTGSYGRCQK------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 145 VNLIGYCCEDEHRLL--VYEYMALGNL--------HDQLFKNYSSTLPWLTRIKIAIGAA 194
V + + L V EY G+L ++ + + L +T++ +A+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL--K 125
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
C G V++RD K +N+ LD N KL DFGLA D+ +GT Y
Sbjct: 126 ECHRRSDGGH-TVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFVGTPYY 182
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLEL 281
+PE +N D++S G +L EL
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 47/233 (20%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAE--VIFLG 137
N + +G G +G VYKG +D+ RP VAVKV Q ++ E + +
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE--RP------VAVKVFSFANRQN---FINEKNIYRVP 62
Query: 138 QLKHPHLVNLIGYCCEDE--------HRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
++H N+ + DE LLV EY G+L L + S W++ ++
Sbjct: 63 LMEHD---NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---WVSSCRL 116
Query: 190 AIGAARCLAFLHGE------EKPVI-YRDFKASNILLDSDYNAKLSDFGLAT--DGPQ-- 238
A R LA+LH E KP I +RD + N+L+ +D +SDFGL+ G +
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 239 --GEDSHITTCVMGTEGYAAPEYI-------NTGHLTTMCDVFSFGVVLLELL 282
GE+ + +GT Y APE + + D+++ G++ E+
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVK-VLDVNGSQGHREW-LAEVIFLGQLKHPHL 144
+GEG +G V K D R VA+K L+ + + ++ + E+ L QL+H +L
Sbjct: 33 VGEGSYGMVMKCRNKDTGR------IVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENL 86
Query: 145 VNLIGYCCEDEHRLLVYEYMALGNLHD-QLFKN---YSSTLPWLTRIKIAIGAARCLAFL 200
VNL+ C + + LV+E++ L D +LF N Y +L +I IG F
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG------FC 140
Query: 201 HGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPE- 258
H +I+RD K NIL+ KL DFG A T GE + + T Y APE
Sbjct: 141 HSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAPEL 195
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTG 284
+ DV++ G ++ E+ G
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 70
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + +VY + L + + +++ +YS TLP +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 185
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 22/236 (9%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD-VNGSQGHREWLAEVIF 135
I+ +F LGEG +G V C + G + VA+K ++ + L E+
Sbjct: 9 ISSDFQLKSLLGEGAYGVV---CSATHKPTG---EIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI-GAA 194
L KH +++ + D Y+ + L + S+ + I+ I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA---------TDGPQGEDSHIT 245
R + LHG VI+RD K SN+L++S+ + K+ DFGLA P G+ S +
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 246 TCVMGTEGYAAPE-YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLV 300
V T Y APE + + + DV+S G +L EL RR + R R + L+
Sbjct: 181 EFV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
+ N+ + LG+G F V + CV A+ + K L Q E
Sbjct: 4 FSDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARIC 59
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL-HDQLFKNYSSTLPWLTRIKIAIGAAR 195
+L+HP++V L E+ LV++ + G L D + + + S I+ + +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES-- 117
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTCVMGTE 252
+A+ H +++R+ K N+LL S KL+DFGLA + E H GT
Sbjct: 118 -IAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 171
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GY +PE + + D+++ GV+L LL G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
+ N+ + LG+G F V + CV A+ + K L Q E
Sbjct: 3 FSDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARIC 58
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL-HDQLFKNYSSTLPWLTRIKIAIGAAR 195
+L+HP++V L E+ LV++ + G L D + + + S I+ + +
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES-- 116
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTCVMGTE 252
+A+ H +++R+ K N+LL S KL+DFGLA + E H GT
Sbjct: 117 -IAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 170
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GY +PE + + D+++ GV+L LL G
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 28/241 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V++ CV+ + K ++ E+ + QL HP L+N
Sbjct: 59 LGSGAFGVVHR-CVE-----KATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQL-FKNYSSTLPWLTRIKIAIGAARCLAFLHGEEK 205
L + +L+ E+++ G L D++ ++Y + + I C H E
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV----INYMRQACEGLKHMHEH 168
Query: 206 PVIYRDFKASNILLDSDY--NAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN-- 261
+++ D K NI+ ++ + K+ DFGLAT E +TT T +AAPE ++
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA---TAEFAAPEIVDRE 225
Query: 262 -TGHLTTMCDVFSFGVVLLELLT---GRRSVEK----NRCKRE--KDLVEWARPMLKDFT 311
G T M + G VLL L+ G +E RC E +D P KDF
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI 285
Query: 312 K 312
K
Sbjct: 286 K 286
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 85 DYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDV---NGSQG--HREWLAEVIFLGQL 139
+ +G+G F V + C++ Q AVK++DV S G + E L
Sbjct: 32 EVIGKGPFS-VVRRCINRE-----TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
KHPH+V L+ D +V+E+M +L ++ K + + + A
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
+ + +I+RD K +LL S N+ KL FG+A GE + +GT + A
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFMA 203
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE + DV+ GV+L LL+G
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 42/232 (18%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+F LG+G FG+V K R L ++ A+K + + + L+EV L L
Sbjct: 7 DFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASL 59
Query: 140 KHPHLVNLIGYCCEDEHRLLV---------------YEYMALGNLHDQLF-KNYSSTLPW 183
H ++V Y E R V EY L+D + +N +
Sbjct: 60 NHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 184 LTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGED-- 241
R+ I A L+++H + +I+R+ K NI +D N K+ DFGLA + + D
Sbjct: 118 YWRLFRQILEA--LSYIHSQ--GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 242 ----------SHITTCVMGTEGYAAPEYIN-TGHLTTMCDVFSFGVVLLELL 282
S T +GT Y A E ++ TGH D +S G++ E +
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 23/260 (8%)
Query: 109 KAQTVAVKVLDVNGSQ-GHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALG 167
K + VA+K +++ Q E L E+ + Q HP++V+ + LV + ++ G
Sbjct: 34 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 168 NLHDQLF------KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDS 221
++ D + ++ S L T I L +LH + I+RD KA NILL
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGE 151
Query: 222 DYNAKLSDFGLATDGPQGED---SHITTCVMGTEGYAAPEYINTGH-LTTMCDVFSFGVV 277
D + +++DFG++ G D + + +GT + APE + D++SFG+
Sbjct: 152 DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 211
Query: 278 LLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQ-IIDSRLEDRYSTEGAKRLAAV 336
+EL TG K + L + D L+ + D + +Y K ++
Sbjct: 212 AIELATGAAPYHKYPPMKVLMLT-----LQNDPPSLETGVQDKEMLKKYGKSFRKMISL- 265
Query: 337 AHQCLSHNPKSRPTMTTVVK 356
CL +P+ RPT +++
Sbjct: 266 ---CLQKDPEKRPTAAELLR 282
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 32/220 (14%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
+ N+ + LG+G F V + CV A+ + K L Q E
Sbjct: 4 FSDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARIC 59
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKN--YSSTLPWLTRIKIAIGAA 194
+L+HP++V L E+ LV++ + G L + + YS A+
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-----------DAS 108
Query: 195 RCL-------AFLHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHI 244
C+ A+ H +++R+ K N+LL S KL+DFGLA + E H
Sbjct: 109 HCIQQILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH- 165
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GT GY +PE + + D+++ GV+L LL G
Sbjct: 166 --GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA---EV 133
++ + + LG GG +V+ + +LR + VAVKVL + ++ +L E
Sbjct: 27 LSDRYELGEILGFGGMSEVH---LARDLR---LHRDVAVKVLRADLARDPSFYLRFRREA 80
Query: 134 IFLGQLKHPHLVNL--IGYCCEDEHRL--LVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
L HP +V + G L +V EY+ L D + + P + I
Sbjct: 81 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGPMTPKRAI 136
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD-GPQGEDSHITTCV 248
+ A C A + +I+RD K +NI++ + K+ DFG+A G T V
Sbjct: 137 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 196
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+GT Y +PE + DV+S G VL E+LTG
Sbjct: 197 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 23/260 (8%)
Query: 109 KAQTVAVKVLDVNGSQ-GHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALG 167
K + VA+K +++ Q E L E+ + Q HP++V+ + LV + ++ G
Sbjct: 39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98
Query: 168 NLHDQLF------KNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDS 221
++ D + ++ S L T I L +LH + I+RD KA NILL
Sbjct: 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGE 156
Query: 222 DYNAKLSDFGLATDGPQGED---SHITTCVMGTEGYAAPEYINTGH-LTTMCDVFSFGVV 277
D + +++DFG++ G D + + +GT + APE + D++SFG+
Sbjct: 157 DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 216
Query: 278 LLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQ-IIDSRLEDRYSTEGAKRLAAV 336
+EL TG K + L + D L+ + D + +Y K ++
Sbjct: 217 AIELATGAAPYHKYPPMKVLMLT-----LQNDPPSLETGVQDKEMLKKYGKSFRKMISL- 270
Query: 337 AHQCLSHNPKSRPTMTTVVK 356
CL +P+ RPT +++
Sbjct: 271 ---CLQKDPEKRPTAAELLR 287
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 31/269 (11%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
I F + LG G F +V+ ++ L + A+K + + + E+ L
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFL------VKQRLTGKLFALKCIKKSPAFRDSSLENEIAVL 60
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKN--YSSTLPWLTRIKIAIGAA 194
++KH ++V L H LV + ++ G L D++ + Y+ L I+ + A
Sbjct: 61 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLV-IQQVLSAV 119
Query: 195 RCLAFLHGEEKPVIYRDFKASNIL-LDSDYNAKL--SDFGLATDGPQGEDSHITTCVMGT 251
+ +LH E +++RD K N+L L + N+K+ +DFGL+ + E + I + GT
Sbjct: 120 K---YLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLS----KMEQNGIMSTACGT 170
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG-----RRSVEKNRCKREKDLVEWARPM 306
GY APE + + D +S GV+ LL G + K K ++ E+ P
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPF 230
Query: 307 LKDFTK-----LDQIIDSRLEDRYSTEGA 330
D ++ + +++ +RY+ E A
Sbjct: 231 WDDISESAKDFICHLLEKDPNERYTCEKA 259
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG-SQGHREWL-AEVIFLGQLKHPHL 144
+G G +G+ K +R + + K LD ++ ++ L +EV L +LKHP++
Sbjct: 14 IGTGSYGRCQK------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 145 VNLIGYCCEDEHRLL--VYEYMALGNL--------HDQLFKNYSSTLPWLTRIKIAIGAA 194
V + + L V EY G+L ++ + + L +T++ +A+
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL--K 125
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
C G V++RD K +N+ LD N KL DFGLA ED +GT Y
Sbjct: 126 ECHRRSDGGH-TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED--FAKEFVGTPYY 182
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLEL 281
+PE +N D++S G +L EL
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 85 DYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDV---NGSQG--HREWLAEVIFLGQL 139
+ +G+G F V + C++ Q AVK++DV S G + E L
Sbjct: 30 EVIGKGPFS-VVRRCINRE-----TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAF 199
KHPH+V L+ D +V+E+M +L ++ K + + + A
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
+ + +I+RD K +LL S N+ KL FG+A GE + +GT + A
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFMA 201
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE + DV+ GV+L LL+G
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
+T + + +G+G F V + CV A+ + K L ++ H++ E
Sbjct: 2 MTDEYQLYEDIGKGAFS-VVRRCVKLCTGHEYAAKIINTKKL---SARDHQKLEREARIC 57
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL-HDQLFKNYSSTLPWLTRIKIAIGAAR 195
LKH ++V L E+ LV++ + G L D + + Y S A+
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE----------ADASH 107
Query: 196 CL-----AFLHGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTC 247
C+ A LH + V++RD K N+LL S KL+DFGLA + QG D
Sbjct: 108 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQG-DQQAWFG 165
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GT GY +PE + D+++ GV+L LL G
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 25/217 (11%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
+T + + LG+G F V + C+ A+ + K L ++ H++ E
Sbjct: 2 MTDEYQLFEELGKGAFS-VVRRCMKIPTGQEYAAKIINTKKL---SARDHQKLEREARIC 57
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL-HDQLFKNYSSTLPWLTRIKIAIGAAR 195
LKHP++V L E+ LV++ + G L D + + Y S A+
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE----------ADASH 107
Query: 196 CLAFL-----HGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTC 247
C+ + H +++RD K N+LL S KL+DFGLA + QG D
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQG-DQQAWFG 165
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GT GY +PE + D+++ GV+L LL G
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 76 MITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDV-NGSQGHR-EWLAEV 133
M T + +G G +G VYK R VA+K + V NG +G + EV
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLPISTVREV 54
Query: 134 IFLGQLK---HPHLVNLIGYCC----EDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLT 185
L +L+ HP++V L+ C + E ++ LV+E++ +L L K LP T
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAET 113
Query: 186 RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ R L FLH +++RD K NIL+ S KL+DFGLA
Sbjct: 114 IKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMAL 168
Query: 246 TCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELL 282
V+ T Y APE + T D++S G + E+
Sbjct: 169 APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 82
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 143 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 197
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 78
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 139 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 193
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 114 AVKVLDVNGSQGHREWLAEV-IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQ 172
AVKV+D + R+ E+ I L +HP+++ L + +H LV E M G L D+
Sbjct: 56 AVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDK 111
Query: 173 LFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNIL-LDSDYNA---KLS 228
+ + + + + IG + + +LH + V++RD K SNIL +D N ++
Sbjct: 112 ILRQKFFSEREASFVLHTIG--KTVEYLHSQG--VVHRDLKPSNILYVDESGNPECLRIC 167
Query: 229 DFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
DFG A +T C T + APE + CD++S G++L +L G
Sbjct: 168 DFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 89
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 150 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 204
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 70
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 185
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 70
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 185
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 82
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 143 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 197
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 71
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 132 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 186
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 32/211 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD------VNGSQGHREWLAEVIFLGQLK 140
+G G +G V C + + GL+ VAVK L ++ + +RE + L +K
Sbjct: 30 VGSGAYGSV---CAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRE----LRLLKHMK 79
Query: 141 HPHLVNLI-----GYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
H +++ L+ E+ + + + ++ +L++ + K T + + I R
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN-IVKXQKLTDDHVQFLIYQI--LR 136
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 137 GLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTGYV-ATRWYR 189
Query: 256 APE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 104
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 165 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 219
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 37 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 90
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLV-YEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA 194
+ +L HP V L +C +D+ +L Y G L + + S TR A
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 147
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT
Sbjct: 148 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQ 204
Query: 254 YAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
Y +PE + D+++ G ++ +L+ G
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 74
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 135 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 189
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 25/217 (11%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
+T + + LG+G F V + C+ A+ + K L ++ H++ E
Sbjct: 2 MTDEYQLFEELGKGAFS-VVRRCMKIPTGQEYAAKIINTKKL---SARDHQKLEREARIC 57
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL-HDQLFKNYSSTLPWLTRIKIAIGAAR 195
LKHP++V L E+ LV++ + G L D + + Y S A+
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE----------ADASH 107
Query: 196 CLAFL-----HGEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATDGPQGEDSHITTC 247
C+ + H +++RD K N+LL S KL+DFGLA + QG D
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQG-DQQAWFG 165
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GT GY +PE + D+++ GV+L LL G
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 26/220 (11%)
Query: 75 QMITHNFSRSDY-----LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREW 129
+M F+ D+ LG+G FG VY N +A+KVL SQ +E
Sbjct: 5 EMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQN------KFIMALKVL--FKSQLEKEG 56
Query: 130 LA-----EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
+ E+ L+HP+++ + Y + + L+ E+ G L+ +L K+
Sbjct: 57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQ 114
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
A L + H E+ VI+RD K N+L+ K++DFG + P S
Sbjct: 115 RSATFMEELADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLR 168
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GT Y PE I D++ GV+ E L G
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 26/220 (11%)
Query: 75 QMITHNFSRSDY-----LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREW 129
+M F+ D+ LG+G FG VY N +A+KVL SQ +E
Sbjct: 5 EMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQN------KFIMALKVL--FKSQLEKEG 56
Query: 130 LA-----EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
+ E+ L+HP+++ + Y + + L+ E+ G L+ +L K+
Sbjct: 57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQ 114
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
A L + H E+ VI+RD K N+L+ K++DFG + P S
Sbjct: 115 RSATFMEELADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLR 168
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GT Y PE I D++ GV+ E L G
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 26/220 (11%)
Query: 75 QMITHNFSRSDY-----LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREW 129
+M F+ D+ LG+G FG VY N +A+KVL SQ +E
Sbjct: 6 EMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQN------KFIMALKVL--FKSQLEKEG 57
Query: 130 LA-----EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWL 184
+ E+ L+HP+++ + Y + + L+ E+ G L+ +L K+
Sbjct: 58 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQ 115
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHI 244
A L + H E+ VI+RD K N+L+ K++DFG + P S
Sbjct: 116 RSATFMEELADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLR 169
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GT Y PE I D++ GV+ E L G
Sbjct: 170 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 76 MITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDV-NGSQGHR-EWLAEV 133
M T + +G G +G VYK R VA+K + V NG +G + EV
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLPISTVREV 54
Query: 134 IFLGQLK---HPHLVNLIGYCC----EDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLT 185
L +L+ HP++V L+ C + E ++ LV+E++ +L L K LP T
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAET 113
Query: 186 RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ R L FLH +++RD K NIL+ S KL+DFGLA
Sbjct: 114 IKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMAL 168
Query: 246 TCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELL 282
V+ T Y APE + T D++S G + E+
Sbjct: 169 DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 32/211 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD------VNGSQGHREWLAEVIFLGQLK 140
+G G +G V C +++ GLK +AVK L ++ + +RE + L +K
Sbjct: 59 VGSGAYGSV---CSSYDVKSGLK---IAVKKLSRPFQSIIHAKRTYRE----LRLLKHMK 108
Query: 141 HPHLVNLI-----GYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
H +++ L+ E+ + + + ++ +L++ + K T + + I R
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNN-IVKCQKLTDDHVQFLIYQI--LR 165
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 166 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWYR 218
Query: 256 APE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 219 APEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 83
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 144 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---S 198
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTGYV-ATRWY 193
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTGYV-ATRWY 199
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTGYV-ATRWY 193
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 70
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---S 185
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 106
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 167 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---S 221
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 114 AVKVLDVNGSQGHREWLAEV-IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQ 172
AVKV+D + R+ E+ I L +HP+++ L + +H LV E M G L D+
Sbjct: 56 AVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDK 111
Query: 173 LFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNIL-LDSDYNA---KLS 228
+ + + + + IG + + +LH + V++RD K SNIL +D N ++
Sbjct: 112 ILRQKFFSEREASFVLHTIG--KTVEYLHSQ--GVVHRDLKPSNILYVDESGNPECLRIC 167
Query: 229 DFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
DFG A +T C T + APE + CD++S G++L +L G
Sbjct: 168 DFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + QG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQGKAFKNRELQIMRKL 70
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---S 185
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 104
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 165 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---S 219
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 108
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 169 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---S 223
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 98
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 159 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---S 213
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 7 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 60
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 118
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 119 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 175
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 114 AVKVLDVNGSQGHREWLAEV-IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQ 172
AVK++D + R+ E+ I L +HP+++ L + ++ +V E M G L D+
Sbjct: 51 AVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDK 106
Query: 173 LFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNIL-LDSDYNA---KLS 228
+ + + + + I + + +LH + V++RD K SNIL +D N ++
Sbjct: 107 ILRQKFFSEREASAVLFTI--TKTVEYLHAQ--GVVHRDLKPSNILYVDESGNPESIRIC 162
Query: 229 DFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
DFG A +T C T + APE + CD++S GV+L +LTG
Sbjct: 163 DFGFAKQLRAENGLLMTPCY--TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 9 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 62
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 120
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD-GPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 121 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 177
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
K+ + I F + LG G F +V + AVK + +G +
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLA------EEKATGKLFAVKCIPKKALKGKESSIE 68
Query: 132 -EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF-KNYSSTLPWLTRIKI 189
E+ L ++KH ++V L H LV + ++ G L D++ K + + T I+
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ 128
Query: 190 AIGAARCLAFLHGEEKPVIYRDFKASNILL---DSDYNAKLSDFGLATDGPQGEDSHITT 246
+ A + +LH +++RD K N+L D + +SDFGL+ +G D T
Sbjct: 129 VLDA---VYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKG-DVMSTA 182
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
C GT GY APE + + D +S GV+ LL G
Sbjct: 183 C--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 75
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 136 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---S 190
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLA----RHTDDEMTGYV-ATRWY 194
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + QG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQGKAFKNRELQIMRKL 70
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---S 185
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 76 MITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDV-NGSQGHR-EWLAEV 133
M T + +G G +G VYK R VA+K + V NG +G + EV
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLPISTVREV 54
Query: 134 IFLGQLK---HPHLVNLIGYCC----EDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLT 185
L +L+ HP++V L+ C + E ++ LV+E++ +L L K LP T
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAET 113
Query: 186 RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
+ R L FLH +++RD K NIL+ S KL+DFGLA
Sbjct: 114 IKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMAL 168
Query: 246 TCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELL 282
V+ T Y APE + T D++S G + E+
Sbjct: 169 FPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + Q R E+ + +L
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQDKRFKNRELQIMRKL 149
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + + +++ +YS TLP +
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 210 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---S 264
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 33 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 86
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTA-EIVS 144
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + + V GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 201
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 10 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 63
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--NYSSTLPWLTRIKIAIGA 193
+ +L HP V L +DE Y G L + K ++ T TR A
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EI 119
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTE 252
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT
Sbjct: 120 VSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTA 176
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
Y +PE + D+++ G ++ +L+ G
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLA----RHTDDEMTGYV-ATRWY 190
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 8 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 61
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 119
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 120 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 176
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 24/205 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V++ + A K + E+ + L+HP LVN
Sbjct: 59 LGTGAFGVVHR------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS-----STLPWLTRIKIAIGAARCLAFLH 201
L +D +++YE+M+ G L +++ ++ + ++ ++ C H
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV--------CKGLCH 164
Query: 202 GEEKPVIYRDFKASNILLDSDYNA--KLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEY 259
E ++ D K NI+ + + KL DFGL + +TT GT +AAPE
Sbjct: 165 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV 221
Query: 260 INTGHLTTMCDVFSFGVVLLELLTG 284
+ D++S GV+ LL+G
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL-AEVIFLGQLKHPHLV 145
LG G FG V+ + + GL+ +K ++ + SQ E + AE+ L L HP+++
Sbjct: 30 LGSGAFGDVH---LVEERSSGLER---VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 146 NLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYS--STLPWLTRIKIAIGAARCLAFLHG 202
+ ED H + +V E G L +++ + L ++ LA+ H
Sbjct: 84 KIFE-VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 203 EEKPVIYRDFKASNILL-DSDYNA--KLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEY 259
+ V+++D K NIL D+ ++ K+ DFGLA E S T GT Y APE
Sbjct: 143 QH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPEV 197
Query: 260 INTGHLTTMCDVFSFGVVLLELLTG 284
+T CD++S GVV+ LLTG
Sbjct: 198 FKRD-VTFKCDIWSAGVVMYFLLTG 221
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 24/205 (11%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG G FG V++ + A K + E+ + L+HP LVN
Sbjct: 165 LGTGAFGVVHR------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 147 LIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS-----STLPWLTRIKIAIGAARCLAFLH 201
L +D +++YE+M+ G L +++ ++ + ++ ++ C H
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV--------CKGLCH 270
Query: 202 GEEKPVIYRDFKASNILLDSDYNA--KLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEY 259
E ++ D K NI+ + + KL DFGL + +TT GT +AAPE
Sbjct: 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV 327
Query: 260 INTGHLTTMCDVFSFGVVLLELLTG 284
+ D++S GV+ LL+G
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGH-REWLAEVIFLGQL 139
+++ Y+GEG +G V D++R VA+K + Q + + L E+ L +
Sbjct: 45 YTQLQYIGEGAYGMV--SSAYDHVR----KTRVAIKKISPFEHQTYCQRTLREIQILLRF 98
Query: 140 KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI---GAARC 196
+H +++ + + Y+ + L+K S L+ I R
Sbjct: 99 RHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQ--QLSNDHICYFLYQILRG 156
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYA 255
L ++H V++RD K SN+L+++ + K+ DFGLA P+ + + T + T Y
Sbjct: 157 LKYIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 256 APE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N+ T D++S G +L E+L+ R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 32/211 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD------VNGSQGHREWLAEVIFLGQLK 140
+G G +G V C + + GL+ VAVK L ++ + +RE + L +K
Sbjct: 30 VGSGAYGSV---CAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRE----LRLLKHMK 79
Query: 141 HPHLVNLI-----GYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
H +++ L+ E+ + + + ++ +L++ + K T + + I R
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN-IVKXQKLTDDHVQFLIYQI--LR 136
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 137 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWYR 189
Query: 256 APE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLL-KYIRKIGSFDETCTRFYTA-EIVS 143
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 200
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + + D+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIFL 136
+F LGEG F V R ++ A+K+L+ + ++ E +
Sbjct: 30 DFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDVM 83
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+L HP V L +DE Y G L + + S TR A
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSA 141
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYA 255
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + + V GT Y
Sbjct: 142 LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYV 198
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGXV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 107/276 (38%), Gaps = 42/276 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN-GSQGHREWLAEV-IFLGQLKHPHL 144
LG G +G V K R Q AVK + SQ + L ++ I + P
Sbjct: 42 LGRGAYGVVEK------XRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFT 95
Query: 145 VNLIGYCCEDEHRLLVYEYM--ALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
V G + + E +L + Q+ + T+P KIA+ + L LH
Sbjct: 96 VTFYGALFREGDVWICXELXDTSLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHS 154
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFG----LATDGPQGEDSHITTCVMGTEGYAAPE 258
+ VI+RD K SN+L+++ K DFG L D + D+ G + Y APE
Sbjct: 155 KLS-VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA-------GCKPYXAPE 206
Query: 259 YI----NTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLD 314
I N + D++S G+ +EL R + W P F +L
Sbjct: 207 RINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS-----------WGTP----FQQLK 251
Query: 315 QIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPT 350
Q+++ + + + QCL N K RPT
Sbjct: 252 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 287
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 199
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQY 198
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 190
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 146 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 198
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 194
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 194
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTA-EIVS 143
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 195
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 184
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 207
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 193
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 200
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 208
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 200
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 190
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 135 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 187
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 148 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 200
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 207
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 194
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 208
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 184
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 133 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 185
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 184
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 141 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 193
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 133 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 185
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIFL 136
+F LGEG F V R ++ A+K+L+ + ++ E +
Sbjct: 15 DFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDVM 68
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+L HP V L +DE Y G L + + S TR A
Sbjct: 69 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSA 126
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYA 255
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 127 LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 183
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
+++ + +G G FG VY+ + D+ + VA+K + QG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIKKV----LQGKAFKNRELQIMRKL 70
Query: 140 KHPHLVNL-IGYCCEDEHRLLVYEYMALGNLHDQLFK---NYS---STLPWLTRIKIAIG 192
H ++V L + E + VY + L + +++ +YS TLP +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGT 251
R LA++H + +RD K N+LLD D KL DFG A +GE + C +
Sbjct: 131 LFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---S 185
Query: 252 EGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 138 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 190
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 134 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 186
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D +T V T Y
Sbjct: 159 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYV-ATRWY 211
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTA-EIVS 141
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 198
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTA-EIVS 141
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 198
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 33 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 86
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTA-EIVS 144
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 201
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTA-EIVS 143
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 94/220 (42%), Gaps = 25/220 (11%)
Query: 76 MITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA---- 131
M T + +G G +G VYK R VA+K + V G L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGGGGGGGLPISTV 59
Query: 132 -EVIFLGQLK---HPHLVNLIGYCC----EDEHRL-LVYEYMALGNLHDQLFKNYSSTLP 182
EV L +L+ HP++V L+ C + E ++ LV+E++ +L L K LP
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLP 118
Query: 183 WLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDS 242
T + R L FLH +++RD K NIL+ S KL+DFGLA
Sbjct: 119 AETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQ 173
Query: 243 HITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELL 282
T V+ T Y APE + T D++S G + E+
Sbjct: 174 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIFL 136
+F LGEG F V R ++ A+K+L+ + ++ E +
Sbjct: 30 DFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDVM 83
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+L HP V L +DE Y G L + + S TR A
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSA 141
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYA 255
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 142 LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYV 198
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTA-EIVS 143
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 200
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTA-EIVS 141
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD-GPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 198
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNG--SQGHREWLA-EVIF 135
+F LGEG F V R ++ A+K+L+ + ++ E
Sbjct: 35 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 88
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ +L HP V L +DE Y G L + + S TR A
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTA-EIVS 146
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGY 254
L +LHG K +I+RD K NILL+ D + +++DFG A P+ + + V GT Y
Sbjct: 147 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQY 203
Query: 255 AAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+PE + D+++ G ++ +L+ G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 32/211 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD------VNGSQGHREWLAEVIFLGQLK 140
+G G +G V C + + GL+ VAVK L ++ + +RE + L +K
Sbjct: 30 VGSGAYGSV---CAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRE----LRLLKHMK 79
Query: 141 HPHLVNLI-----GYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
H +++ L+ E+ + + + ++ +L++ + K+ T + + I R
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN-IVKSQKLTDDHVQFLIYQI--LR 136
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L ++H + +I+RD K SN+ ++ D K+ DFGL + D +T V T Y
Sbjct: 137 GLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLC----RHTDDEMTGYV-ATRWYR 189
Query: 256 APE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK 140
++ Y+GEG +G V DNL K + K+ + L E+ L + +
Sbjct: 29 YTNLSYIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI---GAARCL 197
H +++ + + Y+ + L+K + L+ I R L
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGL 141
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAA 256
++H V++RD K SN+LL++ + K+ DFGLA P + + T + T Y A
Sbjct: 142 KYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 257 PE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
PE +N+ T D++S G +L E+L+ R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 155 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK-HPHLV 145
L EGGF VY+ ++ G + A+K L N + +R + EV F+ +L HP++V
Sbjct: 36 LAEGGFAFVYEA---QDVGSG---REYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 146 NL-----IGYCCED--EHRLLVYEYMALGNLHDQLFKNYS-STLPWLTRIKIAIGAARCL 197
IG D + L+ + G L + L K S L T +KI R +
Sbjct: 90 QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLAT 234
+H ++ P+I+RD K N+LL + KL DFG AT
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 36/214 (16%)
Query: 87 LGEGGFGKVYKGC-VDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLV 145
LG+G +G VY G + + +R +A+K + S+ + E+ LKH ++V
Sbjct: 30 LGKGTYGIVYAGRDLSNQVR-------IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 82
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL------FKNYSSTLPWLTRIKIAIGAARCLAF 199
+G E+ + E + G+L L K+ T+ + T+ +I G L +
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILEG----LKY 137
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNA--KLSDFG----LATDGPQGEDSHITTCVMGTEG 253
LH + +++RD K N+L+++ Y+ K+SDFG LA P T GT
Sbjct: 138 LHDNQ--IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINP------CTETFTGTLQ 188
Query: 254 YAAPEYINTG--HLTTMCDVFSFGVVLLELLTGR 285
Y APE I+ G D++S G ++E+ TG+
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ D+GLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 137 RGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 76 MITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVI 134
M+ ++ + LG G F V K C A+ + + L + RE + EV
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 135 FLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA 194
L +++HP+++ L +L+ E ++ G L D L + S T T+ I
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--L 118
Query: 195 RCLAFLHGEEKPVIYRDFKASNI-LLDSDY---NAKLSDFGLATDGPQGEDSHITTCVMG 250
+ +LH K + + D K NI LLD + KL DFG+A G + + G
Sbjct: 119 DGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFG 173
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
T + APE +N L D++S GV+ LL+G
Sbjct: 174 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + T + T Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWY 195
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 110/278 (39%), Gaps = 41/278 (14%)
Query: 84 SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKH 141
S LG G F V + C+ + Q A K L G E L E+ L K
Sbjct: 34 SKELGRGKFA-VVRQCISKS-----TGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKS 87
Query: 142 -PHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
P ++NL +L+ EY A G + + + I++ + +L
Sbjct: 88 CPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYL 147
Query: 201 HGEEKPVIYRDFKASNILLDSDY---NAKLSDFGLATD-GPQGEDSHITTCVMGTEGYAA 256
H + +++ D K NILL S Y + K+ DFG++ G E I MGT Y A
Sbjct: 148 H--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI----MGTPEYLA 201
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQI 316
PE +N +TT D+++ G++ LLT P + + + +
Sbjct: 202 PEILNYDPITTATDMWNIGIIAYMLLTH------------------TSPFVGEDNQETYL 243
Query: 317 IDSRLEDRYSTEGAKRLAAVA----HQCLSHNPKSRPT 350
S++ YS E ++ +A L NP+ RPT
Sbjct: 244 NISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPT 281
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 28/217 (12%)
Query: 84 SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK-HP 142
S+ LGEG + KV +G V +L+ G + AVK+++ EV L Q + +
Sbjct: 18 SELLGEGAYAKV-QGAV--SLQNG---KEYAVKIIEKQAGHSRSRVFREVETLYQCQGNK 71
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
+++ LI + +D LV+E + G++ + K +R+ + AA L FLH
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFLH- 128
Query: 203 EEKPVIYRDFKASNILLDSDYNA---KLSDFGLATD-------GPQGEDSHITTCVMGTE 252
K + +RD K NIL +S K+ DF L + P T C G+
Sbjct: 129 -TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC--GSA 185
Query: 253 GYAAPEYIN--TGHLT---TMCDVFSFGVVLLELLTG 284
Y APE + T T CD++S GVVL +L+G
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + T + T Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWY 195
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + T + T Y
Sbjct: 143 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWY 195
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 137 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D + V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMAGFV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D + V T Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMAGFV-ATRWY 184
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D + V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMAGFV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 137 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 140 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 141 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 132 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 155 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 133 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D + V T Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMXGXV-ATRWY 208
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 133 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 143 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + T + T
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 76 MITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVI 134
M+ ++ + LG G F V K C A+ + + L + RE + EV
Sbjct: 23 MVEDHYEMGEELGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 135 FLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA 194
L +++HP+++ L +L+ E ++ G L D L + S T T+ I
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--L 139
Query: 195 RCLAFLHGEEKPVIYRDFKASNI-LLDSDY---NAKLSDFGLATDGPQGEDSHITTCVMG 250
+ +LH K + + D K NI LLD + KL DFG+A G + + G
Sbjct: 140 DGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFG 194
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
T + APE +N L D++S GV+ LL+G
Sbjct: 195 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 44/217 (20%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL------DVNGSQGHREWLAEVIFLGQLK 140
+G G +G V C + R G K VA+K L ++ + +RE + L ++
Sbjct: 33 VGSGAYGAV---CSAVDGRTGAK---VAIKKLYRPFQSELFAKRAYRE----LRLLKHMR 82
Query: 141 HPHLVNLIGYCCEDE------HRLLVYEYMA--LGNL--HDQLFKNYSSTLPWLTRIKIA 190
H +++ L+ DE LV +M LG L H++L ++ RI+
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED---------RIQFL 133
Query: 191 I-GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
+ + L ++H +I+RD K N+ ++ D K+ DFGLA DS + V+
Sbjct: 134 VYQMLKGLRYIHA--AGIIHRDLKPGNLAVNEDCELKILDFGLARQA----DSEMXGXVV 187
Query: 250 GTEGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
T Y APE I N T D++S G ++ E++TG+
Sbjct: 188 -TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DFGLA + D + V T Y
Sbjct: 159 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMXGYV-ATRWY 211
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 36/214 (16%)
Query: 87 LGEGGFGKVYKGC-VDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLV 145
LG+G +G VY G + + +R +A+K + S+ + E+ LKH ++V
Sbjct: 16 LGKGTYGIVYAGRDLSNQVR-------IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 68
Query: 146 NLIGYCCEDEHRLLVYEYMALGNLHDQL------FKNYSSTLPWLTRIKIAIGAARCLAF 199
+G E+ + E + G+L L K+ T+ + T+ +I G L +
Sbjct: 69 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILEG----LKY 123
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNA--KLSDFG----LATDGPQGEDSHITTCVMGTEG 253
LH + +++RD K N+L+++ Y+ K+SDFG LA P T GT
Sbjct: 124 LHDNQ--IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINP------CTETFTGTLQ 174
Query: 254 YAAPEYINTG--HLTTMCDVFSFGVVLLELLTGR 285
Y APE I+ G D++S G ++E+ TG+
Sbjct: 175 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 105/247 (42%), Gaps = 30/247 (12%)
Query: 48 PGSPISLNELSSSLVGSNLHVFTLKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPG 107
PGS +SLN +++ S KE+ F G+G FG V G +
Sbjct: 2 PGSMMSLNAAAAADERSR------KEMD----RFQVERMAGQGTFGTVQLG------KEK 45
Query: 108 LKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGY--CCEDEHRLLVYEYMA 165
+VA+K + + +RE L + L L HP++V L Y + R +Y +
Sbjct: 46 STGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVV 104
Query: 166 LGNLHDQLFK---NY--SSTLPWLTRIKIAI-GAARCLAFLHGEEKPVIYRDFKASNILL 219
+ + D L + NY P IK+ + R + LH V +RD K N+L+
Sbjct: 105 MEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV 164
Query: 220 -DSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI-NTGHLTTMCDVFSFGVV 277
++D KL DFG A E + C + Y APE I H TT D++S G +
Sbjct: 165 NEADGTLKLCDFGSAKKLSPSEPNVAYIC---SRYYRAPELIFGNQHYTTAVDIWSVGCI 221
Query: 278 LLELLTG 284
E++ G
Sbjct: 222 FAEMMLG 228
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 109/278 (39%), Gaps = 45/278 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKH--P 142
+G GG KV++ + K Q A+K +++ +Q + E+ +L +L+
Sbjct: 20 IGSGGSSKVFQVLNE-------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLH-DQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L Y D++ +Y M GN+ + K S PW R + +H
Sbjct: 73 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH 128
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+ +++ D K +N L+ D KL DFG+A S + +GT Y PE I
Sbjct: 129 --QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 185
Query: 262 -----------TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDF 310
++ DV+S G +L + G+ ++ ++
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQI 230
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
+KL IID E + K L V CL +PK R
Sbjct: 231 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 268
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 109/278 (39%), Gaps = 45/278 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKH--P 142
+G GG KV++ + K Q A+K +++ +Q + E+ +L +L+
Sbjct: 36 IGSGGSSKVFQVLNE-------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLH-DQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L Y D++ +Y M GN+ + K S PW R + +H
Sbjct: 89 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH 144
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+ +++ D K +N L+ D KL DFG+A S + +GT Y PE I
Sbjct: 145 --QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201
Query: 262 -----------TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDF 310
++ DV+S G +L + G+ ++ ++
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQI 246
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
+KL IID E + K L V CL +PK R
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK 140
++ +G G FG V++ + +++ VA+K + Q R E+ + +K
Sbjct: 42 YTNCKVIGNGSFGVVFQAKL-------VESDEVAIKKV----LQDKRFKNRELQIMRIVK 90
Query: 141 HPHLVNLIGYCC-----EDEHRL-LVYEYMALGNLH-DQLFKNYSSTLPWLTRIKIAIGA 193
HP++V+L + +DE L LV EY+ + + T+P L
Sbjct: 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMGTE 252
R LA++H + +RD K N+LLD KL DFG A GE + C +
Sbjct: 151 LRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC---SR 205
Query: 253 GYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE I + TT D++S G V+ EL+ G+
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R +G G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTIGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EYM G++ L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D K++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R +G G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTIGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EYM G++ L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D K++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 109/278 (39%), Gaps = 45/278 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKH--P 142
+G GG KV++ + K Q A+K +++ +Q + E+ +L +L+
Sbjct: 16 IGSGGSSKVFQVLNE-------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLH-DQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L Y D++ +Y M GN+ + K S PW R + +H
Sbjct: 69 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH 124
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+ +++ D K +N L+ D KL DFG+A S + +GT Y PE I
Sbjct: 125 --QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 181
Query: 262 -----------TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDF 310
++ DV+S G +L + G+ ++ ++
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQI 226
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
+KL IID E + K L V CL +PK R
Sbjct: 227 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 264
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H +I+RD K SN+ ++ D ++ DFGLA D +T V T Y
Sbjct: 142 RGLKYIHS--AGIIHRDLKPSNVAVNEDSELRILDFGLARQA----DEEMTGYV-ATRWY 194
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 28/228 (12%)
Query: 71 LKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL 130
+KE+Q+ +F +G G FG+V + + R ++L + RE
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFRE-E 124
Query: 131 AEVIFLGQLKHPHLVNLIGYCCEDE-HRLLVYEYMALGNLHDQLFKNYSSTLP------W 183
+V+ G + + + Y +DE H LV +Y G+L L + LP +
Sbjct: 125 RDVLVNGDCQ---WITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFY 180
Query: 184 LTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH 243
+ + +AI + L ++H RD K N+LLD + + +L+DFG +D
Sbjct: 181 IGEMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSCL--KMNDDGT 230
Query: 244 ITTCV-MGTEGYAAPEYINT-----GHLTTMCDVFSFGVVLLELLTGR 285
+ + V +GT Y +PE + G CD +S GV + E+L G
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ FGLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 121
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 122 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 171
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A + + + T C GT Y
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGATWTLC--GTPEYL 226
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 109/278 (39%), Gaps = 45/278 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKH--P 142
+G GG KV++ + K Q A+K +++ +Q + E+ +L +L+
Sbjct: 64 IGSGGSSKVFQVLNE-------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLH-DQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L Y D++ +Y M GN+ + K S PW R + +H
Sbjct: 117 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH 172
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+ +++ D K +N L+ D KL DFG+A S + +GT Y PE I
Sbjct: 173 --QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 262 -----------TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDF 310
++ DV+S G +L + G+ ++ ++
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQI 274
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
+KL IID E + K L V CL +PK R
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 28/228 (12%)
Query: 71 LKELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWL 130
+KE+Q+ +F +G G FG+V + + R ++L + RE
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFRE-E 140
Query: 131 AEVIFLGQLKHPHLVNLIGYCCEDE-HRLLVYEYMALGNLHDQLFKNYSSTLP------W 183
+V+ G + + + Y +DE H LV +Y G+L L + LP +
Sbjct: 141 RDVLVNGDCQ---WITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFY 196
Query: 184 LTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSH 243
+ + +AI + L ++H RD K N+LLD + + +L+DFG +D
Sbjct: 197 IGEMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSCL--KMNDDGT 246
Query: 244 ITTCV-MGTEGYAAPEYINT-----GHLTTMCDVFSFGVVLLELLTGR 285
+ + V +GT Y +PE + G CD +S GV + E+L G
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 43/278 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLGQLKHPH 143
LG G F V K C + + GL+ +K S+ + EV L +++HP+
Sbjct: 19 LGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
++ L +L+ E +A G L D L + S T T I + +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSL 133
Query: 204 EKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
+ + + D K NI+L D N K+ DFGLA G + + GT + APE
Sbjct: 134 Q--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPAFVAPE 187
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQI-- 316
+N L D++S GV+ LL+G A P L D TK + +
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TKQETLAN 228
Query: 317 ---IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
++ ED Y + + + L +PK R T+
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H +I+RD K SN+ ++ D ++ DFGLA D +T V T Y
Sbjct: 142 RGLKYIHS--AGIIHRDLKPSNVAVNEDSELRILDFGLARQA----DEEMTGYV-ATRWY 194
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 24/228 (10%)
Query: 77 ITHNFSRSDY---LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEV 133
I H+ R D+ +G G FG V +R L + VAVK ++ G+ E+
Sbjct: 15 IMHDSDRYDFVKDIGSGNFG------VARLMRDKLTKELVAVKYIE-RGAAIDENVQREI 67
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--NYSSTLPWLTRIKIAI 191
I L+HP++V H ++ EY + G L++++ +S ++
Sbjct: 68 INHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS 127
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLS--DFGLATDGPQGEDSHITTCVM 249
G + C + + +RD K N LLD +L DFG + T +
Sbjct: 128 GVSYCHSM------QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---V 178
Query: 250 GTEGYAAPEY-INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE 296
GT Y APE + + + DV+S GV L +L G E R+
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ DF LA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 109/278 (39%), Gaps = 45/278 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKH--P 142
+G GG KV++ + K Q A+K +++ +Q + E+ +L +L+
Sbjct: 17 IGSGGSSKVFQVLNE-------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLH-DQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L Y D++ +Y M GN+ + K S PW R + +H
Sbjct: 70 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH 125
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+ +++ D K +N L+ D KL DFG+A S + +GT Y PE I
Sbjct: 126 --QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182
Query: 262 -----------TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDF 310
++ DV+S G +L + G+ ++ ++
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQI 227
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
+KL IID E + K L V CL +PK R
Sbjct: 228 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 265
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFL 136
+ + + +GEG +G V+K + + VA+K LD + L E+ L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRET------HEIVALKRVRLDDDDEGVPSSALREICLL 55
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTL-----PWLTRIKIAI 191
+LKH ++V L D+ LV+E+ DQ K Y + P + +
Sbjct: 56 KELKHKNIVRLHDVLHSDKKLTLVFEFC------DQDLKKYFDSCNGDLDPEIVK-SFLF 108
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ L F H V++RD K N+L++ + KL+DFGLA G + + T
Sbjct: 109 QLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVT 164
Query: 252 EGYAAPEYINTGHL-TTMCDVFSFGVVLLELLTGRRSV 288
Y P+ + L +T D++S G + EL R +
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ D GLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ D GLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 YLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL------DVNGSQGHREWLAEVIFLGQL 139
++G G +G V C + R G K VA+K L ++ + +RE ++ L +
Sbjct: 49 HVGSGAYGSV---CSAIDKRSGEK---VAIKKLSRPFQSEIFAKRAYRE----LLLLKHM 98
Query: 140 KHPHLVNLIGYCCEDEHRLLVYE-YMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
+H +++ L+ Y+ Y+ + + L K + + L
Sbjct: 99 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLK 158
Query: 199 FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
++H V++RD K N+ ++ D K+ DFGLA D+ +T V+ T Y APE
Sbjct: 159 YIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARHA----DAEMTGYVV-TRWYRAPE 211
Query: 259 YI-NTGHLTTMCDVFSFGVVLLELLTGR 285
I + H D++S G ++ E+LTG+
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREW---LAEVIFL 136
F R LG G FG+V + ++ G A+K+LD +E L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKEIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY G + L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+++D K++DFGLA +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + + T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H +I+RD K SN+ ++ D ++ DFGLA D +T V T Y
Sbjct: 134 RGLKYIHS--AGIIHRDLKPSNVAVNEDCELRILDFGLARQA----DEEMTGYV-ATRWY 186
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELL G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEG 253
R L ++H V++RD K SN+LL++ + K+ DFGLA P + + + T
Sbjct: 140 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 254 YAAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
Y APE +N+ T D++S G +L E+L+ R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 109/278 (39%), Gaps = 45/278 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKH--P 142
+G GG KV++ + K Q A+K +++ +Q + E+ +L +L+
Sbjct: 64 IGSGGSSKVFQVLNE-------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLH-DQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L Y D++ +Y M GN+ + K S PW R + +H
Sbjct: 117 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH 172
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+ +++ D K +N L+ D KL DFG+A S + +GT Y PE I
Sbjct: 173 --QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 262 -----------TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDF 310
++ DV+S G +L + G+ ++ ++
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQI 274
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
+KL IID E + K L V CL +PK R
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 107/262 (40%), Gaps = 51/262 (19%)
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF---KNYSSTLPWLTRIKIAIGAARCL 197
HP+++ YC E R L Y + L NL+ Q KN S L + I R +
Sbjct: 68 HPNVIRY--YCSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 198 A--FLHGEEKPVIYRDFKASNILL--DSDYNAK-----------LSDFGLATDGPQGEDS 242
A H +I+RD K NIL+ S + A +SDFGL G+ S
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 243 HITTC--VMGTEGYAAPEYINTGH-------LTTMCDVFSFGVVLLELLTGRRSVEKNRC 293
T GT G+ APE + + LT D+FS G V +L+ + ++
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 294 KREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTT 353
RE +++ + LD++ L DR A L + Q + H+P RPT
Sbjct: 245 SRESNII-------RGIFSLDEM--KCLHDRSLIAEATDLIS---QMIDHDPLKRPTAMK 292
Query: 354 VV---------KALEPLLDLND 366
V+ K LE LL ++D
Sbjct: 293 VLRHPLFWPKSKKLEFLLKVSD 314
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 187 IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
I + AR + FL + I+RD A NILL + K+ DFGLA D + D
Sbjct: 202 ISYSFQVARGMEFLSS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKG 259
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLV 300
+ APE I +T DV+S+GV+L E+ + S ++++ C R ++ +
Sbjct: 260 DTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGM 319
Query: 301 EWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEP 360
P YST + + C +PK RP +V+ L
Sbjct: 320 RMRAP------------------EYST---PEIYQIMLDCWHRDPKERPRFAELVEKLGD 358
Query: 361 LL 362
LL
Sbjct: 359 LL 360
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLAGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLXGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKA--QTVAVKVLDVNGSQGHR--------EWLAEVIFL 136
L +G F K+ C DN LK +++ K D S + ++ E+ +
Sbjct: 39 LNQGKFNKII-LCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNL--HDQLF----KNYSSTLPWLTRIKIA 190
+K+ + + G + ++YEYM ++ D+ F KNY+ +P + IK
Sbjct: 98 TDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP-IQVIKCI 156
Query: 191 IGAA-RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVM 249
I + +++H E K + +RD K SNIL+D + KLSDFG + D I
Sbjct: 157 IKSVLNSFSYIHNE-KNICHRDVKPSNILMDKNGRVKLSDFG---ESEYMVDKKIKGS-R 211
Query: 250 GTEGYAAPEYIN--TGHLTTMCDVFSFGVVL 278
GT + PE+ + + + D++S G+ L
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGY 254
R L ++H + +I+RD K SN+ ++ D K+ D GLA + D +T V T Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLA----RHTDDEMTGYV-ATRWY 188
Query: 255 AAPE-YINTGHLTTMCDVFSFGVVLLELLTGR 285
APE +N H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D +++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 43/278 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLGQLKHPH 143
LG G F V K C + + GL+ +K S+ + EV L +++HP+
Sbjct: 19 LGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
++ L +L+ E +A G L D L + S T T I + +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSL 133
Query: 204 EKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
+ + + D K NI+L D N K+ DFGLA G + + GT + APE
Sbjct: 134 Q--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPE 187
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQI-- 316
+N L D++S GV+ LL+G A P L D TK + +
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TKQETLAN 228
Query: 317 ---IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
++ ED Y + + + L +PK R T+
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA-EVIF 135
+ ++ + LG G F V K C A+ + + L + RE + EV
Sbjct: 10 VEDHYEMGEELGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
L +++HP+++ L +L+ E ++ G L D L + S T T+ I
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LD 126
Query: 196 CLAFLHGEEKPVIYRDFKASNI-LLDSDY---NAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ +LH K + + D K NI LLD + KL DFG+A G + + GT
Sbjct: 127 GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGT 181
Query: 252 EGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ APE +N L D++S GV+ LL+G
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 26/206 (12%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKHPHL 144
L E G+++KG N + VKVL V ++ R++ E L HP++
Sbjct: 18 LNENHSGELWKGRWQGN--------DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 145 VNLIGYCCEDE--HRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
+ ++G C H L+ + G+L++ L + + + +K A+ AR AFLH
Sbjct: 70 LPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT 129
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLS--DFGLATDGPQGEDSHITTCVMGTEGYAAPEYI 260
E + + ++ +D D A++S D + P + APE +
Sbjct: 130 LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGR---------XYAPAWVAPEAL 180
Query: 261 NTGHLTT---MCDVFSFGVVLLELLT 283
T D +SF V+L EL+T
Sbjct: 181 QKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 86 YLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL------DVNGSQGHREWLAEVIFLGQL 139
++G G +G V C + R G K VA+K L ++ + +RE ++ L +
Sbjct: 31 HVGSGAYGSV---CSAIDKRSGEK---VAIKKLSRPFQSEIFAKRAYRE----LLLLKHM 80
Query: 140 KHPHLVNLIGYCCEDEHRLLVYE-YMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLA 198
+H +++ L+ Y+ Y+ + + L K + + L
Sbjct: 81 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLK 140
Query: 199 FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
++H V++RD K N+ ++ D K+ DFGLA D+ +T V+ T Y APE
Sbjct: 141 YIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARHA----DAEMTGYVV-TRWYRAPE 193
Query: 259 YI-NTGHLTTMCDVFSFGVVLLELLTGR 285
I + H D++S G ++ E+LTG+
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 114 AVKVLDVNGSQGHREWLAEV-IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQ 172
AVK++D + R+ E+ I L +HP+++ L + ++ +V E G L D+
Sbjct: 51 AVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDK 106
Query: 173 LFKNYSSTLPWLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNIL-LDSDYNA---KLS 228
+ + + + + I + + +LH + V++RD K SNIL +D N ++
Sbjct: 107 ILRQKFFSEREASAVLFTI--TKTVEYLHAQ--GVVHRDLKPSNILYVDESGNPESIRIC 162
Query: 229 DFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
DFG A T C T + APE + CD++S GV+L LTG
Sbjct: 163 DFGFAKQLRAENGLLXTPCY--TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 133/333 (39%), Gaps = 71/333 (21%)
Query: 85 DYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP-- 142
D LGEG FGKV + C+D + G + VAVK++ N + +E+ L L
Sbjct: 20 DTLGEGAFGKVVE-CIDH--KAG--GRHVAVKIVK-NVDRYCEAARSEIQVLEHLNTTDP 73
Query: 143 ----HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPW-LTRI-KIAIGAARC 196
V ++ + H +V+E + L F + LP+ L I K+A +
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQICKS 130
Query: 197 LAFLHGEEKPVIYRDFKASNILL-DSDY------------------NAKLSDFGLATDGP 237
+ FLH + + + D K NIL SDY + K+ DFG AT
Sbjct: 131 VNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT--- 185
Query: 238 QGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREK 297
+D H +T V T Y APE I + CDV+S G +L+E G + K
Sbjct: 186 -YDDEHHSTLV-STRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 298 DLVE-----WARPMLKDFTKLDQIIDSRLE-DRYSTEGA--------------------K 331
++E + M++ K RL+ D +S+ G +
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 332 RLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
RL + + L ++P R T+ +K P DL
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALK--HPFFDL 334
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 13 YDTGEELGSGKFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 127
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 128 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 181
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 222
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKH--P 142
+G GG KV++ + K Q A+K +++ +Q + E+ +L +L+
Sbjct: 36 IGSGGSSKVFQVLNE-------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLH-DQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L Y D++ +Y M GN+ + K S PW R + +H
Sbjct: 89 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH 144
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+ +++ D K +N L+ D KL DFG+A + +GT Y PE I
Sbjct: 145 --QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIK 201
Query: 262 -----------TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDF 310
++ DV+S G +L + G+ ++ ++
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQI 246
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
+KL IID E + K L V CL +PK R
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 101
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 102 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 151
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 206
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 13 YDTGEELGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 127
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 128 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 181
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 222
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 87/213 (40%), Gaps = 38/213 (17%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHRE-WLAEVIFLGQLKHPHLV 145
+G G F VYKG L + ++ D ++ R+ + E L L+HP++V
Sbjct: 34 IGRGSFKTVYKG-----LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV 88
Query: 146 NLI--------GYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC- 196
G C +LV E G L K Y L KI + + C
Sbjct: 89 RFYDSWESTVKGKKC----IVLVTELXTSGTL-----KTY---LKRFKVXKIKVLRSWCR 136
Query: 197 -----LAFLHGEEKPVIYRDFKASNILLDSDYNA-KLSDFGLATDGPQGEDSHITTCVMG 250
L FLH P+I+RD K NI + + K+ D GLAT + + V+G
Sbjct: 137 QILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT----LKRASFAKAVIG 192
Query: 251 TEGYAAPEYINTGHLTTMCDVFSFGVVLLELLT 283
T + APE + ++ DV++FG LE T
Sbjct: 193 TPEFXAPEXYEEKYDESV-DVYAFGXCXLEXAT 224
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 13 YDTGEELGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 127
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 128 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 181
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 222
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 13 YDTGEELGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 127
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 128 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 181
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 222
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 87
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 88 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 137
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 192
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 12 YDTGEELGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 126
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 127 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 180
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 221
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 222 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 265
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 13 YDTGEELGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 127
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 128 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 181
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 222
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 12 YDTGEELGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 126
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 127 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 180
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 221
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 222 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 265
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 43/278 (15%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLGQLKHPH 143
LG G F V K C + + GL+ +K S+ + EV L +++HP+
Sbjct: 19 LGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 144 LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHGE 203
++ L +L+ E +A G L D L + S T T I + +LH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHSL 133
Query: 204 EKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTEGYAAPE 258
+ + + D K NI+L D N K+ DFGLA G + + GT + APE
Sbjct: 134 Q--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPE 187
Query: 259 YINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTKLDQI-- 316
+N L D++S GV+ LL+G A P L D TK + +
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TKQETLAN 228
Query: 317 ---IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
++ ED Y + + + L +PK R T+
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 30/157 (19%)
Query: 145 VNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLP------WLTRIKIAIGAARCL 197
+ + Y +D++ L LV +Y G+L L + LP +L + IAI + L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFG----LATDGPQGEDSHITTCVMGTEG 253
++H RD K NIL+D + + +L+DFG L DG + ++ +GT
Sbjct: 195 HYVH--------RDIKPDNILMDMNGHIRLADFGSCLKLMEDG-----TVQSSVAVGTPD 241
Query: 254 YAAPEYINT-----GHLTTMCDVFSFGVVLLELLTGR 285
Y +PE + G CD +S GV + E+L G
Sbjct: 242 YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF-KNYSSTLPWLTRIKIA 190
E+ L +L HP+++ L LV E + G L D++ K Y S +K
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI 157
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTC 247
+ A +A+LH E +++RD K N+L + D K++DFGL+ E +
Sbjct: 158 LEA---VAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKT 209
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
V GT GY APE + D++S G++ LL G
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 13 YDTGEELGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 127
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 128 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 181
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 222
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 13 YDTGEELGSGVFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 127
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 128 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 181
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 222
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 28 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 81
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 82 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 137
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D +++DFG A + + T C GT Y A
Sbjct: 138 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWTLC--GTPEYLA 192
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREW---LAEVIFL 136
F R LG G FG+V + ++ G A+K+LD +E L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKEIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY G + L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+++D +++DFGLA +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHR------E 128
Q + + + LG G F + K C + + GL+ A K + S+ R E
Sbjct: 8 QKVEDFYDIGEELGSGQFA-IVKKCREKS--TGLE---YAAKFIKKRQSRASRRGVCREE 61
Query: 129 WLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIK 188
EV L Q+ HP+++ L +L+ E ++ G L D L + S + T
Sbjct: 62 IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNI-LLDSDY---NAKLSDFGLATDGPQGEDSHI 244
I + +LH K + + D K NI LLD + + KL DFGLA + G +
Sbjct: 122 KQILDG--VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--- 174
Query: 245 TTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GT + APE +N L D++S GV+ LL+G
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
+ + + +G+G FG+V K D + Q VA+K++ N + HR+ E+ L
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKA-YDHKVH-----QHVALKMVR-NEKRFHRQAAEEIRIL 147
Query: 137 GQLKHP------HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
L+ ++++++ H + +E +++ NL++ + KN K A
Sbjct: 148 EHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFA 206
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNA--KLSDFGLATDGPQGEDSHITTCV 248
+CL LH +I+ D K NILL + K+ DFG + E + T +
Sbjct: 207 HSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYTXI 260
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ Y APE I D++S G +L ELLTG
Sbjct: 261 Q-SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 43 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 152
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D +++DFG A + + T C GT Y A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWTLC--GTPEYLA 207
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+++D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 13 YDTGEELGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 127
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 128 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 181
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 222
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 121
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + P R A
Sbjct: 122 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARF---YAAQI 171
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 226
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 95
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + P R A
Sbjct: 96 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARF---YAAQI 145
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 146 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 200
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLAEVIFLG 137
+ + LG G F V K C + + GL+ +K S+ + EV L
Sbjct: 13 YDTGEELGSGQFA-VVKKCREKS--TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 138 QLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
+++HP+++ L +L+ E +A G L D L + S T T I +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGV 127
Query: 198 AFLHGEEKPVIYRDFKASNILLDSDYNA-----KLSDFGLATDGPQGEDSHITTCVMGTE 252
+LH + + + D K NI+L D N K+ DFGLA G + + GT
Sbjct: 128 YYLHSLQ--IAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTP 181
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDFTK 312
+ APE +N L D++S GV+ LL+G A P L D TK
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGD-TK 222
Query: 313 LDQI-----IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTM 351
+ + ++ ED Y + + + L +PK R T+
Sbjct: 223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R +G G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTIGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D K++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
+ + + +G+G FG+V K D + Q VA+K++ N + HR+ E+ L
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKA-YDHKVH-----QHVALKMVR-NEKRFHRQAAEEIRIL 147
Query: 137 GQLKHP------HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
L+ ++++++ H + +E +++ NL++ + KN K A
Sbjct: 148 EHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFA 206
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNA--KLSDFGLATDGPQGEDSHITTCV 248
+CL LH + +I+ D K NILL + K+ DFG + E + T +
Sbjct: 207 HSILQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYTXI 260
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ Y APE I D++S G +L ELLTG
Sbjct: 261 Q-SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ ++ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
+E+ TH LG G FG+V++ ++D + G + V+ L+V ++
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHR--MEDK-QTGFQCAVKKVR-LEVFRAE------- 115
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E++ L P +V L G E + E + G+L QL K LP +
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKE-QGCLPEDRALYYLG 173
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSD-YNAKLSDFG----LATDGPQGEDSHITT 246
A L +LH + +++ D KA N+LL SD +A L DFG L DG G+D
Sbjct: 174 QALEGLEYLH--SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDG-LGKDLLTGD 230
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GTE + APE + DV+S ++L +L G
Sbjct: 231 YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 187 IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
I + A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 203 ICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 260
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLV 300
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 261 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----- 315
Query: 301 EWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEP 360
LK+ T++ R D + E + C P RPT + +V+ L
Sbjct: 316 ------LKEGTRM------RAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLGN 359
Query: 361 LLDLN 365
LL N
Sbjct: 360 LLQAN 364
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVN--GSQGHREWLAEVIFLGQLKH--P 142
+G GG KV++ + K Q A+K +++ +Q + E+ +L +L+
Sbjct: 64 IGSGGSSKVFQVLNE-------KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 143 HLVNLIGYCCEDEHRLLVYEYMALGNLH-DQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L Y D++ +Y M GN+ + K S PW R + +H
Sbjct: 117 KIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH 172
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYIN 261
+ +++ D K +N L+ D KL DFG+A S + +G Y PE I
Sbjct: 173 --QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229
Query: 262 -----------TGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPMLKDF 310
++ DV+S G +L + G+ ++ ++
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQI 274
Query: 311 TKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSR 348
+KL IID E + K L V CL +PK R
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 187 IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
I + A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 196 ICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 253
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLV 300
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----- 308
Query: 301 EWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEP 360
LK+ T++ R D + E + C P RPT + +V+ L
Sbjct: 309 ------LKEGTRM------RAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLGN 352
Query: 361 LLDLN 365
LL N
Sbjct: 353 LLQAN 357
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 187 IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
I + A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 201 ICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 258
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLV 300
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 259 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----- 313
Query: 301 EWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEP 360
LK+ T++ R D + E + C P RPT + +V+ L
Sbjct: 314 ------LKEGTRM------RAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLGN 357
Query: 361 LLDLN 365
LL N
Sbjct: 358 LLQAN 362
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 187 IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
I + A+ + FL + I+RD A NILL K+ DFGLA D + D
Sbjct: 194 ICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 251
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRS------VEKNRCKREKDLV 300
+ APE I T DV+SFGV+L E+ + S +++ C+R
Sbjct: 252 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----- 306
Query: 301 EWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEP 360
LK+ T++ R D + E + C P RPT + +V+ L
Sbjct: 307 ------LKEGTRM------RAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHLGN 350
Query: 361 LLDLN 365
LL N
Sbjct: 351 LLQAN 355
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 79 HNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKV--LDVNGSQGHREWLAEVIFL 136
+ + + +GEG +G V+K + + VA+K LD + L E+ L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRET------HEIVALKRVRLDDDDEGVPSSALREICLL 55
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTL-----PWLTRIKIAI 191
+LKH ++V L D+ LV+E+ DQ K Y + P + +
Sbjct: 56 KELKHKNIVRLHDVLHSDKKLTLVFEFC------DQDLKKYFDSCNGDLDPEIVK-SFLF 108
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
+ L F H V++RD K N+L++ + KL++FGLA G + + T
Sbjct: 109 QLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVT 164
Query: 252 EGYAAPEYINTGHL-TTMCDVFSFGVVLLELLTGRRSV 288
Y P+ + L +T D++S G + EL R +
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY G + L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+++D K++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 43 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 152
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D +++DFG A +G T + GT Y A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLA 207
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L +L HP ++ + + + E +V E M G L D++ N R+K A
Sbjct: 71 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGN--------KRLKEAT 121
Query: 192 GA----ARCLAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHI 244
LA + E +I+RD K N+LL S D K++DFG + GE S +
Sbjct: 122 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 179
Query: 245 TTCVMGTEGYAAPEY---INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE-KDLV 300
T + GT Y APE + T D +S GV+L L+G ++R + KD +
Sbjct: 180 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 238
Query: 301 E----------WARPMLKDFTKLDQIIDSRLEDRYSTEGAKR 332
WA K + +++ + R++TE A R
Sbjct: 239 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 280
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D +++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D +++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D +++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L +L HP ++ + + + E +V E M G L D++ N R+K A
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGN--------KRLKEAT 115
Query: 192 GA----ARCLAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHI 244
LA + E +I+RD K N+LL S D K++DFG + GE S +
Sbjct: 116 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 173
Query: 245 TTCVMGTEGYAAPEY---INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE-KDLV 300
T + GT Y APE + T D +S GV+L L+G ++R + KD +
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 301 E----------WARPMLKDFTKLDQIIDSRLEDRYSTEGAKR 332
WA K + +++ + R++TE A R
Sbjct: 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD--GPQGEDSHITTCVMGTE 252
R L ++H + VI+RD K SN+L++ + K+ DFG+A E + T + T
Sbjct: 170 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 253 GYAAPEYINTGH-LTTMCDVFSFGVVLLELLTGRR 286
Y APE + + H T D++S G + E+L R+
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 93
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 94 ------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQI 143
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 198
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGH--REWLAEVIFLGQLKHPHL 144
+GEG +G VYK +N +T A+K + + + E+ L +LKH ++
Sbjct: 10 IGEGTYGVVYKA--QNNY-----GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 145 VNLIGYCCEDEHRLLVYEYMA--LGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
V L + +LV+E++ L L D S +++ G A C
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC------ 116
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI-N 261
++ V++RD K N+L++ + K++DFGLA G T + T Y AP+ +
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 262 TGHLTTMCDVFSFGVVLLELLTG 284
+ +T D++S G + E++ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L +L HP ++ + + + E +V E M G L D++ N R+K A
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGN--------KRLKEAT 115
Query: 192 GA----ARCLAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHI 244
LA + E +I+RD K N+LL S D K++DFG + GE S +
Sbjct: 116 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 173
Query: 245 TTCVMGTEGYAAPEY---INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE-KDLV 300
T + GT Y APE + T D +S GV+L L+G ++R + KD +
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 301 E----------WARPMLKDFTKLDQIIDSRLEDRYSTEGAKR 332
WA K + +++ + R++TE A R
Sbjct: 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD--GPQGEDSHITTCVMGTE 252
R L ++H + VI+RD K SN+L++ + K+ DFG+A E + T + T
Sbjct: 169 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 253 GYAAPEYINTGH-LTTMCDVFSFGVVLLELLTGRR 286
Y APE + + H T D++S G + E+L R+
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGH--REWLAEVIFLGQLKHPHL 144
+GEG +G VYK +N +T A+K + + + E+ L +LKH ++
Sbjct: 10 IGEGTYGVVYKA--QNNY-----GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 145 VNLIGYCCEDEHRLLVYEYMA--LGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
V L + +LV+E++ L L D S +++ G A C
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC------ 116
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI-N 261
++ V++RD K N+L++ + K++DFGLA G T + T Y AP+ +
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 262 TGHLTTMCDVFSFGVVLLELLTG 284
+ +T D++S G + E++ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L +L HP ++ + + + E +V E M G L D++ N R+K A
Sbjct: 64 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGN--------KRLKEAT 114
Query: 192 GA----ARCLAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHI 244
LA + E +I+RD K N+LL S D K++DFG + GE S +
Sbjct: 115 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 172
Query: 245 TTCVMGTEGYAAPEY---INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE-KDLV 300
T + GT Y APE + T D +S GV+L L+G ++R + KD +
Sbjct: 173 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 231
Query: 301 E----------WARPMLKDFTKLDQIIDSRLEDRYSTEGAKR 332
WA K + +++ + R++TE A R
Sbjct: 232 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 273
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 101
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 102 ------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQI 151
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 206
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L +L HP ++ + + + E +V E M G L D++ N R+K A
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGN--------KRLKEAT 115
Query: 192 GA----ARCLAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHI 244
LA + E +I+RD K N+LL S D K++DFG + GE S +
Sbjct: 116 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 173
Query: 245 TTCVMGTEGYAAPEY---INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE-KDLV 300
T + GT Y APE + T D +S GV+L L+G ++R + KD +
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 301 E----------WARPMLKDFTKLDQIIDSRLEDRYSTEGAKR 332
WA K + +++ + R++TE A R
Sbjct: 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V ++ A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRVML------VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ P LV L Y +D L +V EY+ G + L + + P R A
Sbjct: 96 QAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 101
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 102 ------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQI 151
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 206
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGH--REWLAEVIFLGQLKHPHL 144
+GEG +G VYK +N +T A+K + + + E+ L +LKH ++
Sbjct: 10 IGEGTYGVVYKA--QNNY-----GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 145 VNLIGYCCEDEHRLLVYEYMA--LGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLHG 202
V L + +LV+E++ L L D S +++ G A C
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC------ 116
Query: 203 EEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYI-N 261
++ V++RD K N+L++ + K++DFGLA G T + T Y AP+ +
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 262 TGHLTTMCDVFSFGVVLLELLTG 284
+ +T D++S G + E++ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 132 EVIFLGQLKHPHLVNLIGYCCE--DEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
E+ L +L HP++V L+ + ++H +V+E + G + + TL L+ +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME------VPTLKPLSEDQA 139
Query: 190 AI---GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
+ + +LH ++ +I+RD K SN+L+ D + K++DFG++ + +G D+ ++
Sbjct: 140 RFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSN 196
Query: 247 CVMGTEGYAAPEYINTGHLT---TMCDVFSFGVVLLELLTGR 285
V GT + APE ++ DV++ GV L + G+
Sbjct: 197 TV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 101
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+ G + L + + P R A
Sbjct: 102 ------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQI 151
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 206
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V ++ A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRVML------VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ P LV L Y +D L +V EY+ G + L + + P R A
Sbjct: 96 QAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 24/211 (11%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 121
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--NYSSTLPWLTRIKIAIGA 193
P LV L ++ + +V EY+ G + L + +S +I +
Sbjct: 122 ------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-- 173
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
+LH + +IYRD K N+L+D +++DFG A +G T + GT
Sbjct: 174 --TFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPE 224
Query: 254 YAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
Y APE I + D ++ GV++ E+ G
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 101
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY G + L + + P R A
Sbjct: 102 ------PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF---YAAQI 151
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+++D K++DFG A +G T + GT Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYL 206
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L +L HP ++ + + + E +V E M G L D++ N R+K A
Sbjct: 204 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGN--------KRLKEAT 254
Query: 192 GA----ARCLAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHI 244
LA + E +I+RD K N+LL S D K++DFG + GE S +
Sbjct: 255 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 312
Query: 245 TTCVMGTEGYAAPEY---INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKRE-KDLV 300
T + GT Y APE + T D +S GV+L L+G ++R + KD +
Sbjct: 313 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 371
Query: 301 E----------WARPMLKDFTKLDQIIDSRLEDRYSTEGAKR 332
WA K + +++ + R++TE A R
Sbjct: 372 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 413
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V ++ A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRVML------VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
+ P LV L Y +D L +V EY+ G + L + + P R A
Sbjct: 96 QAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E+ L +L HP ++ + + + E +V E M G L D++ N R+K A
Sbjct: 190 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGN--------KRLKEAT 240
Query: 192 GA----ARCLAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHI 244
LA + E +I+RD K N+LL S D K++DFG + GE S +
Sbjct: 241 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLM 298
Query: 245 TTCVMGTEGYAAPEY---INTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCK 294
T + GT Y APE + T D +S GV+L L+G ++R +
Sbjct: 299 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 350
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 104/258 (40%), Gaps = 47/258 (18%)
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF---KNYSSTLPWLTRIKIAIGAARCL 197
HP+++ YC E R L Y + L NL+ Q KN S L + I R +
Sbjct: 86 HPNVIRY--YCSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 198 A--FLHGEEKPVIYRDFKASNILL--DSDYNAK-----------LSDFGLATDGPQGEDS 242
A H +I+RD K NIL+ S + A +SDFGL G+
Sbjct: 143 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 243 HITTC--VMGTEGYAAPEYINTG---HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREK 297
GT G+ APE + LT D+FS G V +L+ + ++ RE
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 298 DLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVV-- 355
+++ + LD++ L DR A L + Q + H+P RPT V+
Sbjct: 263 NII-------RGIFSLDEM--KCLHDRSLIAEATDLIS---QMIDHDPLKRPTAMKVLRH 310
Query: 356 -------KALEPLLDLND 366
K LE LL ++D
Sbjct: 311 PLFWPKSKKLEFLLKVSD 328
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 104/258 (40%), Gaps = 47/258 (18%)
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF---KNYSSTLPWLTRIKIAIGAARCL 197
HP+++ YC E R L Y + L NL+ Q KN S L + I R +
Sbjct: 86 HPNVIRY--YCSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 198 A--FLHGEEKPVIYRDFKASNILL--DSDYNAK-----------LSDFGLATDGPQGEDS 242
A H +I+RD K NIL+ S + A +SDFGL G+
Sbjct: 143 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 243 HITTC--VMGTEGYAAPEYINTG---HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREK 297
GT G+ APE + LT D+FS G V +L+ + ++ RE
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 298 DLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVV-- 355
+++ + LD++ L DR A L + Q + H+P RPT V+
Sbjct: 263 NII-------RGIFSLDEM--KCLHDRSLIAEATDLIS---QMIDHDPLKRPTAMKVLRH 310
Query: 356 -------KALEPLLDLND 366
K LE LL ++D
Sbjct: 311 PLFWPKSKKLEFLLKVSD 328
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 43 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+ G + L + P R A
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARF---YAAQIV 152
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D +++DFG A +G T + GT Y A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLA 207
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 97/245 (39%), Gaps = 38/245 (15%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
N+ +G G +G VY D N + + V D+ + L E+ L +L
Sbjct: 29 NYEIKHLIGRGSYGYVYLA-YDKNANKNVAIKKVNRMFEDLIDC---KRILREITILNRL 84
Query: 140 KHPHLVNLIGYCCEDEHRLLVYE--YMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
K +++ L ++ LL ++ Y+ L + D K T +LT + L
Sbjct: 85 KSDYIIRLHDLIIPED--LLKFDELYIVL-EIADSDLKKLFKTPIFLTEQHVKTILYNLL 141
Query: 198 ---AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT--------- 245
F+H E +I+RD K +N LL+ D + K+ DFGLA +D HI
Sbjct: 142 LGEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 246 --------------TCVMGTEGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGRRSVEK 290
T + T Y APE I + T D++S G + ELL +S
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHIN 259
Query: 291 NRCKR 295
N R
Sbjct: 260 NPTNR 264
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+ G + L + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D +++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY+ G + L + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+L+D +++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 132/333 (39%), Gaps = 71/333 (21%)
Query: 85 DYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHP-- 142
D LGEG FGKV + C+D + G + VAVK++ N + +E+ L L
Sbjct: 20 DTLGEGAFGKVVE-CIDH--KAG--GRHVAVKIVK-NVDRYCEAARSEIQVLEHLNTTDP 73
Query: 143 ----HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPW-LTRI-KIAIGAARC 196
V ++ + H +V+E + L F + LP+ L I K+A +
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQICKS 130
Query: 197 LAFLHGEEKPVIYRDFKASNILL-DSDY------------------NAKLSDFGLATDGP 237
+ FLH + + + D K NIL SDY + K+ DFG AT
Sbjct: 131 VNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT--- 185
Query: 238 QGEDSHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREK 297
+D H +T V Y APE I + CDV+S G +L+E G + K
Sbjct: 186 -YDDEHHSTLVX-XRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 298 DLVE-----WARPMLKDFTKLDQIIDSRLE-DRYSTEGA--------------------K 331
++E + M++ K RL+ D +S+ G +
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 332 RLAAVAHQCLSHNPKSRPTMTTVVKALEPLLDL 364
RL + + L ++P R T+ +K P DL
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALK--HPFFDL 334
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY G + L + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+++D K++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S GV++ E++ G
Sbjct: 203 KENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S GV++ E++ G
Sbjct: 203 KENVDIWSVGVIMGEMIKG 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 28/218 (12%)
Query: 83 RSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK-H 141
+ D LGEG +V + C+ NL + +Q AVK+++ EV L Q + H
Sbjct: 17 QEDVLGEGAHARV-QTCI--NL---ITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH 70
Query: 142 PHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
+++ LI + E++ LV+E M G++ + K L + A L FLH
Sbjct: 71 RNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLH 128
Query: 202 GEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATD-------GPQGEDSHITTCVMGT 251
K + +RD K NIL + K+ DFGL + P +T C G+
Sbjct: 129 N--KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC--GS 184
Query: 252 EGYAAPEYINT-----GHLTTMCDVFSFGVVLLELLTG 284
Y APE + CD++S GV+L LL+G
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 93
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+ G + L + P R A
Sbjct: 94 ------PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARF---YAAQI 143
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 198
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 97/237 (40%), Gaps = 35/237 (14%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
+ N+ +G G +G VY D N + + V D+ + L E+ L
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLA-YDKNTEKNVAIKKVNRMFEDLIDC---KRILREITIL 79
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYE--YMALGNLHDQLFKNYSSTLPWLTRIKIAIGAA 194
+LK +++ L D+ LL ++ Y+ L + D K T +LT I
Sbjct: 80 NRLKSDYIIRLYDLIIPDD--LLKFDELYIVL-EIADSDLKKLFKTPIFLTEEHIKTILY 136
Query: 195 RCL---AFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT------ 245
L F+H E +I+RD K +N LL+ D + K+ DFGLA +D++I
Sbjct: 137 NLLLGENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 246 --------------TCVMGTEGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGRRS 287
T + T Y APE I + T D++S G + ELL +S
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
AP I + D ++ GV++ E+ G
Sbjct: 206 APAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P LV L ++ + +V EY G + L + + P R A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 151
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+++D +++DFG A +G T + GT Y A
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLA 206
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 77 ITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFL 136
+ + + +G+G FG+V K D + Q VA+K++ N + HR+ E+ L
Sbjct: 95 VAYRYEVLKVIGKGXFGQVVKA-YDHKVH-----QHVALKMVR-NEKRFHRQAAEEIRIL 147
Query: 137 GQLKHP------HLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIA 190
L+ ++++++ H + +E +++ NL++ + KN K A
Sbjct: 148 EHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFA 206
Query: 191 IGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNA--KLSDFGLATDGPQGEDSHITTCV 248
+CL LH +I+ D K NILL + K+ DFG + +
Sbjct: 207 HSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSC-----YEHQRVYXX 259
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ + Y APE I D++S G +L ELLTG
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 72 KELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA 131
+E+ TH LG G FG+V++ ++D + G + V+ L+V ++
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHR--MEDK-QTGFQCAVKKVR-LEVFRAE------- 134
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
E++ L P +V L G E + E + G+L QL K LP +
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKE-QGCLPEDRALYYLG 192
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSD-YNAKLSDFGLATD-GPQGEDSHITTC-- 247
A L +LH + +++ D KA N+LL SD +A L DFG A P G + T
Sbjct: 193 QALEGLEYLH--SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GTE + APE + DV+S ++L +L G
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 87/218 (39%), Gaps = 38/218 (17%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL 139
F R LG G FG+V ++ A+K+LD +V+ L Q+
Sbjct: 43 QFERIRTLGTGSFGRVML------VKHKETGNHYAMKILDKQ----------KVVKLKQI 86
Query: 140 KH-------------PHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTR 186
+H P LV L ++ + +V EY G + L + + P R
Sbjct: 87 EHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP-HAR 145
Query: 187 IKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITT 246
A L F + +IYRD K N+L+D K++DFG A +G T
Sbjct: 146 F---YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR----TW 197
Query: 247 CVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GT Y APE I + D ++ GV++ E+ G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 43 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P L L ++ + +V EY G + L + + P R A
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 152
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+++D K++DFG A +G T + GT Y A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLA 207
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 104/262 (39%), Gaps = 51/262 (19%)
Query: 141 HPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLF---KNYSSTLPWLTRIKIAIGAARCL 197
HP N+I Y C + +Y + L NL+ Q KN S L + I R +
Sbjct: 68 HP---NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 198 A--FLHGEEKPVIYRDFKASNILL--DSDYNAK-----------LSDFGLATDGPQGEDS 242
A H +I+RD K NIL+ S + A +SDFGL G+
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 243 HITTC--VMGTEGYAAPEYINTGH-------LTTMCDVFSFGVVLLELLTGRRSVEKNRC 293
GT G+ APE + + LT D+FS G V +L+ + ++
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 294 KREKDLVEWARPMLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTT 353
RE +++ + LD++ L DR A L + Q + H+P RPT
Sbjct: 245 SRESNII-------RGIFSLDEM--KCLHDRSLIAEATDLIS---QMIDHDPLKRPTAMK 292
Query: 354 VV---------KALEPLLDLND 366
V+ K LE LL ++D
Sbjct: 293 VLRHPLFWPKSKKLEFLLKVSD 314
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 43 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P L L ++ + +V EY G + L + + P R A
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARF---YAAQIV 152
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+++D K++DFG A +G T + GT Y A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLA 207
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 209 YRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTM 268
+RD K NIL+ +D A L DFG+A+ + + + V GT Y APE + H T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 269 CDVFSFGVVLLELLTG 284
D+++ VL E LTG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 80 NFSRSDYLGEGGFGKV----YKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIF 135
F R LG G FG+V +K + L Q V VK+ + + + L V F
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 100
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAAR 195
P LV L ++ + +V EY+A G + L + + P R A
Sbjct: 101 ------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARF---YAAQI 150
Query: 196 CLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYA 255
L F + +IYRD K N+L+D +++DFG A +G T + GT
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEAL 205
Query: 256 APEYINTGHLTTMCDVFSFGVVLLELLTG 284
APE I + D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 80 NFSRSDYLGEGGFGK-VYKGCVDDNLRPGLKAQTVAVK-VLDVNGSQGHREWLAEVIFLG 137
+F D LG G G VY+G D+ + VAVK +L S RE V L
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDN--------RDVAVKRILPECFSFADRE----VQLLR 72
Query: 138 QL-KHPHLVNLIGYCCEDEHRLLVYEYMAL--GNLHDQLFKNYSSTLPWLTRIKIAIGAA 194
+ +HP N+I Y C ++ R Y + L L + + + + L L I +
Sbjct: 73 ESDEHP---NVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHL-GLEPITLLQQTT 128
Query: 195 RCLAFLHGEEKPVIYRDFKASNILLD-----SDYNAKLSDFGLATDGPQGEDSHIT-TCV 248
LA LH +++RD K NIL+ A +SDFGL G S + V
Sbjct: 129 SGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 249 MGTEGYAAPEYINTG---HLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARP 305
GTEG+ APE ++ + T D+FS G V +++ +R+ +++ A
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGA-- 244
Query: 306 MLKDFTKLDQIIDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVK 356
LD + + ED + E +++ A+ +P+ RP+ V+K
Sbjct: 245 -----CSLDCLHPEKHEDVIARELIEKMIAM-------DPQKRPSAKHVLK 283
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 142 PHLVNLIGYCCEDEHR-----LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
PH+V ++ E+ H L++ E M G L ++ + +I
Sbjct: 82 PHIVCILD-VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 140
Query: 197 LAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
+ FLH + +RD K N+L S D KL+DFG A + Q ++ T C T
Sbjct: 141 IQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCY--TPY 194
Query: 254 YAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
Y APE + CD++S GV++ LL G
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 142 PHLVNLIGYCCEDEHR-----LLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
PH+V ++ E+ H L++ E M G L ++ + +I
Sbjct: 63 PHIVCILD-VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 121
Query: 197 LAFLHGEEKPVIYRDFKASNILLDS---DYNAKLSDFGLATDGPQGEDSHITTCVMGTEG 253
+ FLH + +RD K N+L S D KL+DFG A + Q ++ T C T
Sbjct: 122 IQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCY--TPY 175
Query: 254 YAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
Y APE + CD++S GV++ LL G
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 85/208 (40%), Gaps = 18/208 (8%)
Query: 80 NFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLD---VNGSQGHREWLAEVIFL 136
F R LG G FG+V + ++ G A+K+LD V + L E L
Sbjct: 43 QFERIKTLGTGSFGRV---MLVKHMETG---NHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 137 GQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARC 196
+ P L L ++ + +V EY G + L + P R A
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARF---YAAQIV 152
Query: 197 LAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAA 256
L F + +IYRD K N+++D K++DFG A +G T + GT Y A
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLA 207
Query: 257 PEYINTGHLTTMCDVFSFGVVLLELLTG 284
PE I + D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 32/238 (13%)
Query: 127 REWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQ-LFKNYSSTLPWLT 185
R++LAEV+ HP +V + + + Y+ + + Q L ++ LP
Sbjct: 130 RQFLAEVV------HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAE 183
Query: 186 RIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHIT 245
I + L++LH ++Y D K NI+L ++ KL D G S I
Sbjct: 184 AIAYLLEILPALSYLH--SIGLVYNDLKPENIML-TEEQLKLIDLGAV--------SRIN 232
Query: 246 TC--VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWA 303
+ + GT G+ APE + TG T D+++ G L L R R D +
Sbjct: 233 SFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDL----PTRNGRYVDGLPED 287
Query: 304 RPMLKDFTK----LDQIIDSRLEDRYST--EGAKRLAAVAHQCLSHNPK-SRPTMTTV 354
P+LK + L + ID R++T E + +L V + ++ + RP ++T+
Sbjct: 288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTI 345
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 26/160 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVK-VLDVNGSQGHR-EWLAEVIFLGQLKHPHL 144
+G+G FG+V+K R Q VA+K VL N +G L E+ L LKH ++
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 145 VNLIGYC---------CEDEHRLLV--YEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGA 193
VNLI C C+ L+ E+ G L + L K TL + R+ +
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQML-- 134
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA 233
L ++H + +++RD KA+N+L+ D KL+DFGLA
Sbjct: 135 LNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 19/216 (8%)
Query: 73 ELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAE 132
E + H + LG G FG+V++ D + V ++V V E
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHR-MKDKQTGFQCAVKKVRLEVFRVE----------E 114
Query: 133 VIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIG 192
++ L P +V L G E + E + G+L QL K LP +
Sbjct: 115 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMG-CLPEDRALYYLGQ 172
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSD-YNAKLSDFGLA-TDGPQGEDSHITTC--V 248
A L +LH + +++ D KA N+LL SD A L DFG A P G + T +
Sbjct: 173 ALEGLEYLH--TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 230
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GTE + APE + D++S ++L +L G
Sbjct: 231 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVK-VLDVNGSQGHR-EWLAEVIFLGQLKHPHL 144
+G+G FG+V+K R Q VA+K VL N +G L E+ L LKH ++
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 145 VNLIGYC---CEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
VNLI C +R Y+ L S+ L T +I L L+
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 202 G-EEKPVIYRDFKASNILLDSDYNAKLSDFGLA 233
+++RD KA+N+L+ D KL+DFGLA
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 88/221 (39%), Gaps = 24/221 (10%)
Query: 77 ITHNFSRSDY---LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEV 133
I H+ R + +G G FG V +R + VAVK ++ G + E+
Sbjct: 13 IMHDSDRYELVKDIGSGNFG------VARLMRDKQSNELVAVKYIE-RGEKIDENVKREI 65
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--NYSSTLPWLTRIKIAI 191
I L+HP++V H +V EY + G L +++ +S ++
Sbjct: 66 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 125
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLS--DFGLATDGPQGEDSHITTCVM 249
G + C A V +RD K N LLD +L DFG + T +
Sbjct: 126 GVSYCHAM------QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---V 176
Query: 250 GTEGYAAPEY-INTGHLTTMCDVFSFGVVLLELLTGRRSVE 289
GT Y APE + + + DV+S GV L +L G E
Sbjct: 177 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 26/160 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVK-VLDVNGSQGHR-EWLAEVIFLGQLKHPHL 144
+G+G FG+V+K R Q VA+K VL N +G L E+ L LKH ++
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 145 VNLIGYC---------CEDEHRLLV--YEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGA 193
VNLI C C+ L+ E+ G L + L K TL + R+ +
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQML-- 134
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA 233
L ++H + +++RD KA+N+L+ D KL+DFGLA
Sbjct: 135 LNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 26/160 (16%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVK-VLDVNGSQGHR-EWLAEVIFLGQLKHPHL 144
+G+G FG+V+K R Q VA+K VL N +G L E+ L LKH ++
Sbjct: 25 IGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 145 VNLIGYC---------CEDEHRLLV--YEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGA 193
VNLI C C+ L+ E+ G L + L K TL + R+ +
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLN 135
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA 233
L ++H + +++RD KA+N+L+ D KL+DFGLA
Sbjct: 136 G--LYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S G ++ E++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S G ++ E++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S G ++ E++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 19/216 (8%)
Query: 73 ELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAE 132
E + H + +G G FG+V++ D + V ++V V E
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHR-MKDKQTGFQCAVKKVRLEVFRVE----------E 100
Query: 133 VIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIG 192
++ L P +V L G E + E + G+L QL K LP +
Sbjct: 101 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMG-CLPEDRALYYLGQ 158
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSD-YNAKLSDFGLA-TDGPQGEDSHITTC--V 248
A L +LH + +++ D KA N+LL SD A L DFG A P G + T +
Sbjct: 159 ALEGLEYLH--TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 216
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GTE + APE + D++S ++L +L G
Sbjct: 217 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 83 RSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLK-H 141
+ D LGEG +V + C+ NL + +Q AVK+++ EV L Q + H
Sbjct: 17 QEDVLGEGAHARV-QTCI--NL---ITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH 70
Query: 142 PHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
+++ LI + E++ LV+E M G++ + K L + A L FLH
Sbjct: 71 RNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLH 128
Query: 202 GEEKPVIYRDFKASNILLDSDYNA---KLSDFGLATD-------GPQGEDSHITTCVMGT 251
K + +RD K NIL + K+ DF L + P +T C G+
Sbjct: 129 N--KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC--GS 184
Query: 252 EGYAAPEYINT-----GHLTTMCDVFSFGVVLLELLTG 284
Y APE + CD++S GV+L LL+G
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 19/216 (8%)
Query: 73 ELQMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAE 132
E + H + +G G FG+V++ D + V ++V V E
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHR-MKDKQTGFQCAVKKVRLEVFRVE----------E 116
Query: 133 VIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIG 192
++ L P +V L G E + E + G+L QL K LP +
Sbjct: 117 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMG-CLPEDRALYYLGQ 174
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSD-YNAKLSDFGLA-TDGPQGEDSHITTC--V 248
A L +LH + +++ D KA N+LL SD A L DFG A P G + T +
Sbjct: 175 ALEGLEYLH--TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 232
Query: 249 MGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
GTE + APE + D++S ++L +L G
Sbjct: 233 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S G ++ E++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S G ++ E++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 88/221 (39%), Gaps = 24/221 (10%)
Query: 77 ITHNFSRSDY---LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEV 133
I H+ R + +G G FG V +R + VAVK ++ G + E+
Sbjct: 14 IMHDSDRYELVKDIGSGNFG------VARLMRDKQSNELVAVKYIE-RGEKIAANVKREI 66
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--NYSSTLPWLTRIKIAI 191
I L+HP++V H +V EY + G L +++ +S ++
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLS--DFGLATDGPQGEDSHITTCVM 249
G + C A V +RD K N LLD +L DFG + T +
Sbjct: 127 GVSYCHAM------QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---V 177
Query: 250 GTEGYAAPEY-INTGHLTTMCDVFSFGVVLLELLTGRRSVE 289
GT Y APE + + + DV+S GV L +L G E
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S G ++ E++ G
Sbjct: 204 KENVDIWSVGCIMGEMIKG 222
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 17/217 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLA 131
Q + + + LG G F + K C + + GL+ +K S+ E
Sbjct: 8 QKVEDFYDIGEELGSGQFA-IVKKCREKS--TGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
EV L Q+ H +++ L +L+ E ++ G L D L + S + T I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNI-LLDSDY---NAKLSDFGLATDGPQGEDSHITTC 247
+ +LH K + + D K NI LLD + + KL DFGLA + G +
Sbjct: 125 LDG--VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKN 177
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GT + APE +N L D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 17/217 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLA 131
Q + + + LG G F + K C + + GL+ +K S+ E
Sbjct: 8 QKVEDFYDIGEELGSGQFA-IVKKCREKS--TGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
EV L Q+ H +++ L +L+ E ++ G L D L + S + T I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNI-LLDSDY---NAKLSDFGLATDGPQGEDSHITTC 247
+ +LH K + + D K NI LLD + + KL DFGLA + ED
Sbjct: 125 LDG--VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKN 177
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GT + APE +N L D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 17/217 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLA 131
Q + + + LG G F + K C + + GL+ +K S+ E
Sbjct: 8 QKVEDFYDIGEELGSGQFA-IVKKCREKS--TGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
EV L Q+ H +++ L +L+ E ++ G L D L + S + T I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNI-LLDSDY---NAKLSDFGLATDGPQGEDSHITTC 247
+ +LH K + + D K NI LLD + + KL DFGLA + ED
Sbjct: 125 LDG--VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKN 177
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GT + APE +N L D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 17/217 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLA 131
Q + + + LG G F + K C + + GL+ +K S+ E
Sbjct: 8 QKVEDFYDIGEELGSGQFA-IVKKCREKS--TGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
EV L Q+ H +++ L +L+ E ++ G L D L + S + T I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNI-LLDSDY---NAKLSDFGLATDGPQGEDSHITTC 247
+ +LH K + + D K NI LLD + + KL DFGLA + G +
Sbjct: 125 LDG--VNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKN 177
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GT + APE +N L D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S G ++ E++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVN 146
LG GG G V+ +D + VA+K + + Q + L E+ + +L H ++V
Sbjct: 19 LGCGGNGLVFSAVDNDC------DKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 147 L--------------IGYCCEDEHRLLVYEYMA--LGNLHDQ--LFKNYSSTLPWLTRIK 188
+ +G E +V EYM L N+ +Q L + ++ +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMY----- 127
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILLDS-DYNAKLSDFGLA--TDGPQGEDSHIT 245
R L ++H V++RD K +N+ +++ D K+ DFGLA D H++
Sbjct: 128 ---QLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 246 TCVMGTEGYAAPEYI-NTGHLTTMCDVFSFGVVLLELLTGR 285
++ T+ Y +P + + + T D+++ G + E+LTG+
Sbjct: 183 EGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 17/217 (7%)
Query: 75 QMITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQ---GHREWLA 131
Q + + + LG G F + K C + + GL+ +K S+ E
Sbjct: 8 QKVEDFYDIGEELGSGQFA-IVKKCREKS--TGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 132 EVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAI 191
EV L Q+ H +++ L +L+ E ++ G L D L + S + T I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNI-LLDSDY---NAKLSDFGLATDGPQGEDSHITTC 247
+ +LH K + + D K NI LLD + + KL DFGLA + ED
Sbjct: 125 --LDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKN 177
Query: 248 VMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ GT + APE +N L D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPEVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S G ++ E++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
+I+RD K SNI++ SD K+ DFGLA + + T + T Y APE I
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 267 TMCDVFSFGVVLLELLTG 284
D++S G ++ EL+ G
Sbjct: 202 ENVDIWSVGCIMGELVKG 219
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 32/183 (17%)
Query: 130 LAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKI 189
L E+ L +L H H+V ++ + Y+ L + D FK T +LT + I
Sbjct: 100 LREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL-EIADSDFKKLFRTPVYLTELHI 158
Query: 190 AIGAARCLA---FLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLA--TDGPQGEDSHI 244
L ++H +++RD K +N L++ D + K+ DFGLA D P+ +S +
Sbjct: 159 KTLLYNLLVGVKYVHS--AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQL 216
Query: 245 T-----------------------TCVMGTEGYAAPEYI-NTGHLTTMCDVFSFGVVLLE 280
T + T Y APE I + T DV+S G + E
Sbjct: 217 PISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276
Query: 281 LLT 283
LL
Sbjct: 277 LLN 279
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 17/209 (8%)
Query: 76 MITHNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVK--VLDVNGSQGHREWLAEV 133
+F R LG G +G+V+K +R + AVK + G + LAEV
Sbjct: 54 FFQQSFQRLSRLGHGSYGEVFK------VRSKEDGRLYAVKRSMSPFRGPKDRARKLAEV 107
Query: 134 IFLGQL-KHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIG 192
++ +HP V L +E +L + G Q + + ++LP
Sbjct: 108 GSHEKVGQHPCCVRL--EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRD 165
Query: 193 AARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTE 252
LA LH + +++ D K +NI L KL DFGL + + G
Sbjct: 166 TLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDP 220
Query: 253 GYAAPEYINTGHLTTMCDVFSFGVVLLEL 281
Y APE + G T DVFS G+ +LE+
Sbjct: 221 RYMAPELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
+I+RD K SNI++ SD K+ DFGLA + + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTACT---NFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 267 TMCDVFSFGVVLLELLTG 284
D++S G ++ EL+ G
Sbjct: 204 ANVDIWSVGCIMGELVKG 221
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 62/249 (24%)
Query: 68 VFTLKELQMITHNFSRSDYLGEGGF-----------GKVYKGCVD---DNLRPGLKAQTV 113
V LKE+++ +F +G G F G+VY + D L+ G +
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 114 AVKVLDVNGSQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQL 173
+ + VNG R W+ ++ F Q ++ + LV EY G+L L
Sbjct: 110 EERDVLVNGD---RRWITQLHFAFQ--------------DENYLYLVMEYYVGGDLL-TL 151
Query: 174 FKNYSSTLP------WLTRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKL 227
+ +P +L I +AI + L ++H RD K NILLD + +L
Sbjct: 152 LSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH--------RDIKPDNILLDRCGHIRL 203
Query: 228 SDFG----LATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLTTM-------CDVFSFGV 276
+DFG L DG + + +GT Y +PE + CD ++ GV
Sbjct: 204 ADFGSCLKLRADG-----TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGV 258
Query: 277 VLLELLTGR 285
E+ G+
Sbjct: 259 FAYEMFYGQ 267
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + + T Y APE I
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMVPFVVTRYYRAPEVILGMGY 204
Query: 266 TTMCDVFSFGVVLLELLTG 284
D++S G ++ E++ G
Sbjct: 205 KENVDIWSVGCIMGEMIKG 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 81 FSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLA--EVIFLGQ 138
+ R LGEG +G+VYK +D + +TVA+K + + + A EV L +
Sbjct: 36 YRRITKLGEGTYGEVYK-AIDT-----VTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 139 LKHPHLVNLIGYCCEDEHRL-LVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCL 197
L+H +++ L HRL L++EY A +L + KN ++ + + +
Sbjct: 90 LQHRNIIELKS-VIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQL--INGV 145
Query: 198 AFLHGEEKPVIYRDFKASNILLD-SDYNA----KLSDFGLATDGPQGEDSHITTCVMGTE 252
F H + ++RD K N+LL SD + K+ DFGLA G T + T
Sbjct: 146 NFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITL 201
Query: 253 GYAAPE-YINTGHLTTMCDVFSFGVVLLELL 282
Y PE + + H +T D++S + E+L
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 40/237 (16%)
Query: 84 SDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-DVNGSQGHREWLAEVIFLGQLKHP 142
SD LG+G V++G R A+KV +++ + + E L +L H
Sbjct: 14 SDILGQGATANVFRG------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHK 67
Query: 143 HLVNLIGYCCEDE----HRLLVYEYMALGNLHDQLFK-NYSSTLP---WLTRIKIAIGAA 194
++V L + E+E H++L+ E+ G+L+ L + + + LP +L ++ +G
Sbjct: 68 NIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 195 RCLAFLHGEEKPVIYRDFKASNILL----DSDYNAKLSDFGLATDGPQGEDSHITTCVMG 250
H E +++R+ K NI+ D KL+DFG A + ED + G
Sbjct: 126 N-----HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE---LEDDEQFVSLYG 177
Query: 251 TEGYAAPEYINTGHLT--------TMCDVFSFGVVLLELLTGR---RSVEKNRCKRE 296
TE Y P+ L D++S GV TG R E R +E
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 40/243 (16%)
Query: 78 THNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL-DVNGSQGHREWLAEVIFL 136
H + SD LG+G V++G R A+KV +++ + + E L
Sbjct: 8 NHLWLLSDILGQGATANVFRG------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVL 61
Query: 137 GQLKHPHLVNLIGYCCEDE----HRLLVYEYMALGNLHDQLFK-NYSSTLP---WLTRIK 188
+L H ++V L + E+E H++L+ E+ G+L+ L + + + LP +L ++
Sbjct: 62 KKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR 119
Query: 189 IAIGAARCLAFLHGEEKPVIYRDFKASNILL----DSDYNAKLSDFGLATDGPQGEDSHI 244
+G H E +++R+ K NI+ D KL+DFG A + ED
Sbjct: 120 DVVGGMN-----HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELEDDEQ 171
Query: 245 TTCVMGTEGYAAPEYINTGHLT--------TMCDVFSFGVVLLELLTGR---RSVEKNRC 293
+ GTE Y P+ L D++S GV TG R E R
Sbjct: 172 FVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231
Query: 294 KRE 296
+E
Sbjct: 232 NKE 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 196 KENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 30/224 (13%)
Query: 77 ITHNFSRSDY---LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEV 133
I H+ R + +G G FG V +R + VAVK ++ G + E+
Sbjct: 14 IMHDSDRYELVKDIGSGNFG------VARLMRDKQSNELVAVKYIE-RGEKIDENVKREI 66
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--NYSSTLPWLTRIKIAI 191
I L+HP++V H +V EY + G L +++ +S ++
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLS--DFGLATDG---PQGEDSHITT 246
G + C A V +RD K N LLD +L FG + Q +D+
Sbjct: 127 GVSYCHAM------QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---- 176
Query: 247 CVMGTEGYAAPEY-INTGHLTTMCDVFSFGVVLLELLTGRRSVE 289
+GT Y APE + + + DV+S GV L +L G E
Sbjct: 177 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 85/219 (38%), Gaps = 20/219 (9%)
Query: 77 ITHNFSRSDY---LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEV 133
I H+ R + +G G FG V +R + VAVK ++ G + E+
Sbjct: 14 IMHDSDRYELVKDIGSGNFG------VARLMRDKQSNELVAVKYIE-RGEKIDENVKREI 66
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--NYSSTLPWLTRIKIAI 191
I L+HP++V H +V EY + G L +++ +S ++
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGT 251
G + C A V +RD K N LLD +L S + V GT
Sbjct: 127 GVSYCHAM------QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV-GT 179
Query: 252 EGYAAPEY-INTGHLTTMCDVFSFGVVLLELLTGRRSVE 289
Y APE + + + DV+S GV L +L G E
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDY-NA--KLSDFGLATDGPQGED 241
+ I +IG A + +LH + +RD K N+L S NA KL+DFG A + +
Sbjct: 164 SEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHN 218
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
S T C T Y APE + CD++S GV++ LL G
Sbjct: 219 SLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDY-NA--KLSDFGLATDGPQGED 241
+ I +IG A + +LH + +RD K N+L S NA KL+DFG A + +
Sbjct: 120 SEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHN 174
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
S T C T Y APE + CD++S GV++ LL G
Sbjct: 175 SLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDY-NA--KLSDFGLATDGPQGED 241
+ I +IG A + +LH + +RD K N+L S NA KL+DFG A + +
Sbjct: 170 SEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHN 224
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
S T C T Y APE + CD++S GV++ LL G
Sbjct: 225 SLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDY-NA--KLSDFGLATDGPQGED 241
+ I +IG A + +LH + +RD K N+L S NA KL+DFG A + +
Sbjct: 125 SEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHN 179
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
S T C T Y APE + CD++S GV++ LL G
Sbjct: 180 SLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDY-NA--KLSDFGLATDGPQGED 241
+ I +IG A + +LH + +RD K N+L S NA KL+DFG A + +
Sbjct: 120 SEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHN 174
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
S T C T Y APE + CD++S GV++ LL G
Sbjct: 175 SLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDY-NA--KLSDFGLATDGPQGED 241
+ I +IG A + +LH + +RD K N+L S NA KL+DFG A + +
Sbjct: 124 SEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHN 178
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
S T C T Y APE + CD++S GV++ LL G
Sbjct: 179 SLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDY-NA--KLSDFGLATDGPQGED 241
+ I +IG A + +LH + +RD K N+L S NA KL+DFG A + +
Sbjct: 126 SEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHN 180
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
S T C T Y APE + CD++S GV++ LL G
Sbjct: 181 SLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDY-NA--KLSDFGLATDGPQGED 241
+ I +IG A + +LH + +RD K N+L S NA KL+DFG A + +
Sbjct: 118 SEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHN 172
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
S T C T Y APE + CD++S GV++ LL G
Sbjct: 173 SLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDY-NA--KLSDFGLATDGPQGED 241
+ I +IG A + +LH + +RD K N+L S NA KL+DFG A + +
Sbjct: 119 SEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHN 173
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
S T C T Y APE + CD++S GV++ LL G
Sbjct: 174 SLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 201
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 202 KENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 196 KENVDIWSVGCIMGEMV 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 204 KENVDIWSVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 197 KENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 204 KENVDIWSVGCIMGEMV 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 115/298 (38%), Gaps = 53/298 (17%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLK-AQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPHLV 145
LGEGGF V +L GL A+K + + Q E E HP+++
Sbjct: 37 LGEGGFSYV-------DLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 146 NLIGYCCEDE----HRLLVYEYMALGNLHDQL--FKNYSSTLPWLTRIKIAIGAARCLAF 199
L+ YC + L+ + G L +++ K+ + L + + +G R L
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 200 LHGEEKPVIYRDFKASNILLDSDYNAKLSDFG------LATDGPQG----EDSHITTCVM 249
+H K +RD K +NILL + L D G + +G + +D C
Sbjct: 150 IHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC-- 205
Query: 250 GTEGYAAPEYINTGH---LTTMCDVFSFGVVLLELLTGRRSVEKNRCKREKDLVEWARPM 306
T Y APE + + DV+S G VL ++ G D+V
Sbjct: 206 -TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY---------DMV------ 249
Query: 307 LKDFTKLDQI---IDSRLEDRYSTEGAKRLAAVAHQCLSHNPKSRPTMTTVVKALEPL 361
F K D + + ++L S + L + + ++ +P RP + ++ LE L
Sbjct: 250 ---FQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 185 TRIKIAIGAARCLAFLHGEEKPVIYRDFKASNILLDSDY-NA--KLSDFGLATDGPQGED 241
+ I +IG A + +LH + +RD K N+L S NA KL+DFG A + +
Sbjct: 134 SEIMKSIGEA--IQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-TSHN 188
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
S T C T Y APE + CD++S GV++ LL G
Sbjct: 189 SLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 197 KENVDIWSVGCIMGEMV 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 24/216 (11%)
Query: 77 ITHNFSRSDY---LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEV 133
I H+ R + +G G FG V +R + VAVK ++ G + E+
Sbjct: 14 IMHDSDRYELVKDIGAGNFG------VARLMRDKQANELVAVKYIE-RGEKIDENVKREI 66
Query: 134 IFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFK--NYSSTLPWLTRIKIAI 191
I L+HP++V H +V EY + G L +++ +S ++
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 192 GAARCLAFLHGEEKPVIYRDFKASNILLDSD--YNAKLSDFGLATDGPQGEDSHITTCVM 249
G +++ H + V +RD K N LLD K++DFG + +
Sbjct: 127 G----VSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP---KSAV 177
Query: 250 GTEGYAAPEY-INTGHLTTMCDVFSFGVVLLELLTG 284
GT Y APE + + + DV+S GV L +L G
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 241 KENVDIWSVGCIMGEMV 257
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLATDGPQGEDSHITTCVMGTEGYAAPEYINTGHLT 266
+I+RD K SNI++ SD K+ DFGLA S + T + T Y APE I
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYK 241
Query: 267 TMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 242 ENVDIWSVGCIMGEMV 257
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 17/215 (7%)
Query: 85 DYLGEGGFGKVYKGCVDDNL-RPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQLKHPH 143
D LGEG +GKV + + L R +K NG ++ E+ L +L+H +
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKK---EIQLLRRLRHKN 67
Query: 144 LVNLIG--YCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFLH 201
++ L+ Y E + +V EY G + + L P L +LH
Sbjct: 68 VIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH 126
Query: 202 GEEKPVIYRDFKASNILLDSDYNAKLSDFGLATD-GPQGEDSHITTCVMGTEGYAAPEYI 260
+ ++++D K N+LL + K+S G+A P D T G+ + PE
Sbjct: 127 SQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPAFQPPEIA 183
Query: 261 NTGHLTTM----CDVFSFGVVLLELLTGRRSVEKN 291
N L T D++S GV L + TG E +
Sbjct: 184 NG--LDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 78 THNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL--DVNGSQGHREWLAEVIF 135
T F + +G G FG V+K CV L + A + K L V+ RE A +
Sbjct: 8 TTEFHELEKIGSGEFGSVFK-CVK-RLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV- 64
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS--STLPWLTRIKIAIGA 193
LGQ H H+V ED+H L+ EY G+L D + +NY S + +
Sbjct: 65 LGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 122
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILL 219
R L ++H +++ D K SNI +
Sbjct: 123 GRGLRYIHS--MSLVHMDIKPSNIFI 146
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 78 THNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL--DVNGSQGHREWLAEVIF 135
T F + +G G FG V+K CV L + A + K L V+ RE A +
Sbjct: 8 TTEFHELEKIGSGEFGSVFK-CVK-RLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV- 64
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS--STLPWLTRIKIAIGA 193
LGQ H H+V ED+H L+ EY G+L D + +NY S + +
Sbjct: 65 LGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 122
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILL 219
R L ++H +++ D K SNI +
Sbjct: 123 GRGLRYIHS--MSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 78 THNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL--DVNGSQGHREWLAEVIF 135
T F + +G G FG V+K CV L + A + K L V+ RE A +
Sbjct: 6 TTEFHELEKIGSGEFGSVFK-CVK-RLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV- 62
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS--STLPWLTRIKIAIGA 193
LGQ H H+V ED+H L+ EY G+L D + +NY S + +
Sbjct: 63 LGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 120
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILL 219
R L ++H +++ D K SNI +
Sbjct: 121 GRGLRYIHS--MSLVHMDIKPSNIFI 144
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 78 THNFSRSDYLGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVL--DVNGSQGHREWLAEVIF 135
T F + +G G FG V+K CV L + A + K L V+ RE A +
Sbjct: 10 TTEFHELEKIGSGEFGSVFK-CVK-RLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV- 66
Query: 136 LGQLKHPHLVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYS--STLPWLTRIKIAIGA 193
LGQ H H+V ED+H L+ EY G+L D + +NY S + +
Sbjct: 67 LGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 124
Query: 194 ARCLAFLHGEEKPVIYRDFKASNILL 219
R L ++H +++ D K SNI +
Sbjct: 125 GRGLRYIHS--MSLVHMDIKPSNIFI 148
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 207
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 208 KENVDLWSVGCIMGEMV 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 207 VIYRDFKASNILLDSDYNAKLSDFGLA-TDGPQGEDSHITTCVMGTEGYAAPEYINTGHL 265
+I+RD K SNI++ SD K+ DFGLA T G S + T + T Y APE I
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAG----TSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 266 TTMCDVFSFGVVLLELL 282
D++S G ++ E++
Sbjct: 197 KENVDLWSVGCIMGEMV 213
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 91/223 (40%), Gaps = 39/223 (17%)
Query: 87 LGEGGFGKVYKGCVDDNLRPGLKAQTVAVKVLDVNGSQGHREWLAEVIFLGQL--KHPH- 143
LGEG FG+V + CVD + R G + VA+K++ N + E+ L ++ K P
Sbjct: 41 LGEGTFGRVVQ-CVD-HRRGGAR---VALKIIK-NVEKYKEAARLEINVLEKINEKDPDN 94
Query: 144 ---LVNLIGYCCEDEHRLLVYEYMALGNLHDQLFKNYSSTLPWLTRIKIAIGAARCLAFL 200
V + + H + +E + L D L N P +A + + FL
Sbjct: 95 KNLCVQMFDWFDYHGHMCISFELLGLSTF-DFLKDNNYLPYPIHQVRHMAFQLCQAVKFL 153
Query: 201 HGEEKPVIYRDFKASNILL-DSDYN------------------AKLSDFGLATDGPQGED 241
H + + + D K NIL +SDY ++ DFG AT D
Sbjct: 154 H--DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT-----FD 206
Query: 242 SHITTCVMGTEGYAAPEYINTGHLTTMCDVFSFGVVLLELLTG 284
+ ++ T Y APE I + CDV+S G ++ E G
Sbjct: 207 HEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,797,348
Number of Sequences: 62578
Number of extensions: 509251
Number of successful extensions: 3969
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 1397
Number of HSP's gapped (non-prelim): 1147
length of query: 449
length of database: 14,973,337
effective HSP length: 102
effective length of query: 347
effective length of database: 8,590,381
effective search space: 2980862207
effective search space used: 2980862207
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)