Query 013113
Match_columns 449
No_of_seqs 161 out of 1343
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 04:26:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013113.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013113hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 100.0 3E-124 1E-128 956.9 28.7 449 1-449 1-451 (451)
2 3ryc_B Tubulin beta chain; alp 100.0 4E-122 1E-126 940.0 26.9 433 1-443 1-433 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 5E-111 2E-115 869.3 30.9 430 1-438 2-441 (475)
4 2btq_B Tubulin btubb; structur 100.0 4E-109 1E-113 848.7 24.4 423 1-435 1-425 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 3E-108 1E-112 849.4 27.8 427 1-441 3-436 (473)
6 1w5f_A Cell division protein F 100.0 1E-43 3.6E-48 354.1 12.8 287 1-361 21-314 (353)
7 2vap_A FTSZ, cell division pro 100.0 1.4E-43 4.6E-48 353.9 12.6 283 3-361 39-327 (364)
8 2r75_1 Cell division protein F 100.0 6.5E-44 2.2E-48 354.6 8.2 296 3-381 9-311 (338)
9 1ofu_A FTSZ, cell division pro 100.0 9.9E-43 3.4E-47 344.0 13.3 295 3-379 13-313 (320)
10 1rq2_A Cell division protein F 100.0 8E-43 2.7E-47 350.0 10.3 286 2-361 12-302 (382)
11 2vaw_A FTSZ, cell division pro 100.0 2.9E-42 1E-46 347.2 13.9 298 2-380 12-314 (394)
12 2vxy_A FTSZ, cell division pro 100.0 4.6E-42 1.6E-46 344.5 13.8 291 2-361 12-302 (382)
13 3m89_A FTSZ/tubulin-related pr 100.0 5.3E-38 1.8E-42 313.9 11.0 278 4-328 45-356 (427)
14 4dxd_A Cell division protein F 100.0 1.2E-31 4E-36 266.2 10.7 267 3-337 19-290 (396)
15 3v3t_A Cell division GTPase FT 100.0 3.9E-31 1.3E-35 259.9 12.1 194 4-258 7-206 (360)
16 4ei7_A Plasmid replication pro 99.8 2.5E-19 8.7E-24 180.9 11.0 346 4-403 18-381 (389)
17 3r4v_A Putative uncharacterize 99.3 6.1E-13 2.1E-17 126.1 6.1 173 3-240 4-177 (315)
18 2e4h_B Tubulin alpha-ubiquitou 97.0 0.00057 1.9E-08 44.3 3.4 27 416-442 1-27 (36)
19 1pdo_A Mannose permease; phosp 65.9 8.6 0.00029 31.9 5.3 31 115-145 41-71 (135)
20 3bed_A PTS system, IIA compone 65.3 4.2 0.00014 34.2 3.2 30 115-145 45-74 (142)
21 3g7n_A Lipase; hydrolase fold, 63.1 4.9 0.00017 37.6 3.5 70 104-178 96-165 (258)
22 3uue_A LIP1, secretory lipase 57.8 7.3 0.00025 36.8 3.8 59 104-166 110-168 (279)
23 3lfh_A Manxa, phosphotransfera 55.4 7.7 0.00026 32.8 3.2 39 115-153 43-82 (144)
24 2nx2_A Hypothetical protein YP 55.4 47 0.0016 29.0 8.4 92 136-241 46-137 (181)
25 3gx1_A LIN1832 protein; APC633 50.4 19 0.00065 29.7 4.7 40 114-155 43-82 (130)
26 3mtq_A Putative phosphoenolpyr 48.6 8.8 0.0003 33.1 2.4 31 116-146 61-91 (159)
27 3ipr_A PTS system, IIA compone 46.7 14 0.00048 31.3 3.4 40 115-154 41-80 (150)
28 3o0d_A YALI0A20350P, triacylgl 43.1 9.8 0.00034 36.3 2.1 59 105-167 127-185 (301)
29 3ngm_A Extracellular lipase; s 40.2 12 0.00041 36.1 2.2 56 104-163 108-163 (319)
30 3b48_A Uncharacterized protein 39.9 7.2 0.00025 32.5 0.5 28 117-145 49-76 (135)
31 1tia_A Lipase; hydrolase(carbo 39.9 16 0.00054 34.3 2.9 53 104-160 109-161 (279)
32 1uwc_A Feruloyl esterase A; hy 39.6 11 0.00037 35.1 1.7 52 104-159 97-148 (261)
33 3ct6_A PTS-dependent dihydroxy 38.3 11 0.00038 31.3 1.4 27 117-145 44-70 (131)
34 2p10_A MLL9387 protein; putati 37.6 13 0.00045 35.1 1.9 35 115-157 13-47 (286)
35 3gdw_A Sigma-54 interaction do 36.3 34 0.0012 28.5 4.2 40 114-155 43-84 (139)
36 3f1i_H Hepatocyte growth facto 36.0 28 0.00097 27.1 3.2 52 378-434 30-90 (98)
37 1tib_A Lipase; hydrolase(carbo 34.4 14 0.00048 34.4 1.6 53 104-160 110-162 (269)
38 2wlt_A L-asparaginase; hydrola 28.4 1.1E+02 0.0036 29.5 6.7 97 110-211 65-162 (332)
39 1o7j_A L-asparaginase; atomic 27.7 1E+02 0.0035 29.5 6.5 97 110-211 65-162 (327)
40 2ful_A EIF-5, eukaryotic trans 27.4 41 0.0014 29.3 3.3 53 384-436 104-161 (177)
41 2aot_A HMT, histamine N-methyl 26.4 97 0.0033 28.4 6.0 57 117-174 35-91 (292)
42 1wsa_A Asparaginase, asparagin 26.3 1.1E+02 0.0038 29.3 6.5 97 110-211 63-160 (330)
43 3a1g_A RNA-directed RNA polyme 24.4 1.4E+02 0.0048 22.0 5.0 44 378-430 32-75 (80)
44 3ff5_A PEX14P, peroxisomal bio 24.3 29 0.00099 24.1 1.3 23 399-424 31-53 (54)
45 3nxk_A Cytoplasmic L-asparagin 23.3 1.4E+02 0.0046 28.8 6.4 95 111-211 70-165 (334)
46 1k2d_P MBP peptide, myelin bas 23.3 20 0.0007 20.2 0.3 8 144-151 16-23 (26)
47 2him_A L-asparaginase 1; hydro 22.6 1.6E+02 0.0055 28.6 6.8 94 110-211 83-177 (358)
48 1tgl_A Triacyl-glycerol acylhy 22.1 69 0.0024 29.5 4.0 51 103-157 107-157 (269)
49 1wls_A L-asparaginase; structu 21.6 1.1E+02 0.0036 29.4 5.3 93 110-211 55-148 (328)
50 3kl4_B DPAP B, YSCV, signal pe 20.2 19 0.00064 22.5 -0.3 11 144-154 4-14 (42)
51 1nns_A L-asparaginase II; amid 20.1 1.7E+02 0.0059 27.9 6.4 95 110-211 61-156 (326)
52 2w84_A Peroxisomal membrane pr 20.0 39 0.0013 24.8 1.3 25 398-425 35-59 (70)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=3.4e-124 Score=956.87 Aligned_cols=449 Identities=83% Similarity=1.375 Sum_probs=423.4
Q ss_pred CEeEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeeccc
Q 013113 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRT 80 (449)
Q Consensus 1 M~eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~ 80 (449)
|||||+||+||||||||.+||+++|.||+|+++|.++.+......++++++||+|++.++|+||||||||||++|++++.
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~ 80 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeee
Confidence 99999999999999999999999999999999998876554323467899999999999999999999999999999999
Q ss_pred cccccccCccccccCcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhh
Q 013113 81 GSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160 (449)
Q Consensus 81 ~~~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~de 160 (449)
|+++++|+|++++++++|||||||+|||+.|+++.|+++|+||+++|+||++|||+++||+|||||||+|+.|+|.|+++
T Consensus 81 g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~e 160 (451)
T 3ryc_A 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160 (451)
T ss_dssp STTTTTSCGGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccCHHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhcccc
Q 013113 161 YGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240 (449)
Q Consensus 161 yp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 240 (449)
||++.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++|+++|+
T Consensus 161 y~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 240 (451)
T 3ryc_A 161 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
T ss_dssp TTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhccccccc
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCceeeeeeccc
Q 013113 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYR 320 (449)
Q Consensus 241 ~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 320 (449)
++||||.+|.||.+|.+|||||||+||++++|+|+++..+..++++++.+|++++|+++|+|++|+|++|+|+++++++|
T Consensus 241 slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 320 (451)
T 3ryc_A 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320 (451)
T ss_dssp HHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhcc
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCcccccccCCCCceeeecCCCCccCCCCCcccccceeEEeecChhhHHHHHHHHHHHHHHhh
Q 013113 321 GDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYA 400 (449)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~~~~ 400 (449)
|+++++++.+++..++.|++..|++|+|++||+++|+++|..+++.++++...++|+|+|+|+|.+.|+++.+||++||+
T Consensus 321 G~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~~ 400 (451)
T 3ryc_A 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 400 (451)
T ss_dssp ESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHhccCCCCCC--CCCCCC
Q 013113 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGVDDE--DDGEEY 449 (449)
Q Consensus 401 rkAflH~Y~~~Gmee~eF~Ea~~~l~~li~~Y~~~~~~~~~~~--~~~~~~ 449 (449)
||||||||++|||||+||.||+++|.+|+++|++++.+..+++ .+.|||
T Consensus 401 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~~~~~~~~~ 451 (451)
T 3ryc_A 401 KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY 451 (451)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred cceeHhhhcCCccchhhHHHHHHHHHHHHHHHHHHhcCCCcccccccccCC
Confidence 9999999999999999999999999999999999987765433 244443
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=4.2e-122 Score=940.04 Aligned_cols=433 Identities=42% Similarity=0.831 Sum_probs=418.2
Q ss_pred CEeEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeeccc
Q 013113 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRT 80 (449)
Q Consensus 1 M~eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~ 80 (449)
|||||+||+||||||||.+||+++|.||+++++|.+..+++. +.+++++||+|++.++|+|||||||+||++|++++.
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~--~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~ 78 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDL--QLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRS 78 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTH--HHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHT
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccc--cccchhhccccCCCCccccceeEecCCchhhhhhhc
Confidence 999999999999999999999999999999999988765442 457899999999999999999999999999999999
Q ss_pred cccccccCccccccCcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhh
Q 013113 81 GSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160 (449)
Q Consensus 81 ~~~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~de 160 (449)
|+++++|+|++++++++|||||||+|||+.|+++.|+++|+||+++|+||++|||+++||+|||||||+|+.|+|.|+++
T Consensus 79 g~~~~lf~p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~e 158 (445)
T 3ryc_B 79 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158 (445)
T ss_dssp STTGGGSCGGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHH
T ss_pred ccccceecccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhcccc
Q 013113 161 YGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240 (449)
Q Consensus 161 yp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 240 (449)
||++.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++|+++|+
T Consensus 159 y~kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 238 (445)
T 3ryc_B 159 YPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238 (445)
T ss_dssp CTTSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhcc
Confidence 99999999999999877899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCceeeeeeccc
Q 013113 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYR 320 (449)
Q Consensus 241 ~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 320 (449)
++||||.+|.||.+|.+|||||||+||++++++|+++..+..++++++.+|++++|+++|+|.+|+|+.|+|+++++++|
T Consensus 239 slRf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 318 (445)
T 3ryc_B 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFR 318 (445)
T ss_dssp HHHSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeee
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCcccccccCCCCceeeecCCCCccCCCCCcccccceeEEeecChhhHHHHHHHHHHHHHHhh
Q 013113 321 GDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYA 400 (449)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~~~~ 400 (449)
|+++++++.+++..++.|++..|++|+|+++|+++|+++|..+ ++++++|+|+|+|.+.|+++.+||++||+
T Consensus 319 G~v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~--------~~s~~~lsNsTaI~~~~~rl~~kFd~m~~ 390 (445)
T 3ryc_B 319 GRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMSSTFIGNSTAIQELFKRISEQFTAMFR 390 (445)
T ss_dssp ESCCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTC--------SEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCccc--------ceeeeeecCcHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999998754 68999999999999999999999999999
Q ss_pred ccccccccccCCCChhhHHHHHHHHHHHHHHHHHhccCCCCCC
Q 013113 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGVDDE 443 (449)
Q Consensus 401 rkAflH~Y~~~Gmee~eF~Ea~~~l~~li~~Y~~~~~~~~~~~ 443 (449)
||||||||++|||||+||.||+++|++|+++|++++....+|+
T Consensus 391 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~ 433 (445)
T 3ryc_B 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQ 433 (445)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHCCTTC-
T ss_pred cccchhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 9999999999999999999999999999999999987765554
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=4.5e-111 Score=869.32 Aligned_cols=430 Identities=31% Similarity=0.612 Sum_probs=402.8
Q ss_pred CEeEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeeccc
Q 013113 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRT 80 (449)
Q Consensus 1 M~eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~ 80 (449)
|||||+||+||||||||++||++++.||+++++|.+..... ...+++++||+|++.++|+||||+||+||++|+.++.
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~--~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~ 79 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFAT--EGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILN 79 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCC--TTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHH
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCccc--ccccccceeeeecCCCceecceeEecCCcceeeeecc
Confidence 79999999999999999999999999999999997765332 2456899999999999999999999999999999999
Q ss_pred cccccccCccccccCcc--cCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhh
Q 013113 81 GSYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158 (449)
Q Consensus 81 ~~~~~~~~~~~~~~~~~--gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~ 158 (449)
++++.+|+|++++.+++ |+||||++|| +.|++..|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+
T Consensus 80 ~~~~~lf~p~~~i~g~~g~gAgnn~a~G~-~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~ 158 (475)
T 3cb2_A 80 SPYAKLYNPENIYLSEHGGGAGNNWASGF-SQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLN 158 (475)
T ss_dssp STTTTTSCGGGEEECCTTCCCTTCHHHHH-HHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred ccccccCCccceeecccccCCCCCchhhh-hhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHH
Confidence 99999999999999987 7999999995 78999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcceeeEEEecCCC-CCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhc
Q 013113 159 VDYGKKSKLGFTIYPSPQ-VSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237 (449)
Q Consensus 159 deyp~~~i~~~~v~P~~~-~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (449)
|+||++.+++++|+|++. .+++++++||++|++++|.+++|++|+++|++|+++|.+.+++..|+|.++|++||++|++
T Consensus 159 dey~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~ 238 (475)
T 3cb2_A 159 DRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSA 238 (475)
T ss_dssp HHSTTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccc
Confidence 999999999999999975 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCccchhhhhhcCCCCCccccccccccccccccc-ccccccChhhHHHHhcCCCCCCcccCCC---CCcee
Q 013113 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEK-AYHEQLSVPEITNAVFEPSSMMAKCDPR---HGKYM 313 (449)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~l 313 (449)
+|.++||||.+|.|+.++.+|||||||+||++++++|+++..+ ..+++.++.++++++|+++|+|.+|+|+ .++|+
T Consensus 239 iT~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyl 318 (475)
T 3cb2_A 239 STTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYI 318 (475)
T ss_dssp HTTTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEE
T ss_pred cccccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchh
Confidence 9999999999999999999999999999999999999999877 7789999999999999999999999999 99999
Q ss_pred eeeecccccCChhhHHHHHHhhhccCcccccccCCCCceeeecCCCCccCCCCCcccccceeEEeecChhhHHHHHHHHH
Q 013113 314 ACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDH 393 (449)
Q Consensus 314 s~~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~ 393 (449)
++++++||++.++++.+++..++.|++..|++|+|+++|+++|+++|..+++ .+.++|+|+|+|+|.+.|+++.+
T Consensus 319 a~~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~-----~~~s~~~lsN~TaI~~~f~ri~~ 393 (475)
T 3cb2_A 319 AILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSA-----HRVSGLMMANHTSISSLFERTCR 393 (475)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC----------CCEEEEEEEEGGGHHHHHHHHH
T ss_pred hhHHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCC-----cceEEEEecCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999876543 25789999999999999999999
Q ss_pred HHHHHhhccccccccccCCCCh---hhHHHHHHHHHHHHHHHHHhccC
Q 013113 394 KFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYEEVGAE 438 (449)
Q Consensus 394 ~~~~~~~rkAflH~Y~~~Gmee---~eF~Ea~~~l~~li~~Y~~~~~~ 438 (449)
||++||+||||||||++||||| +||.||+++|++|+++|++++.+
T Consensus 394 kfd~m~~rrAflHwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~~~~~ 441 (475)
T 3cb2_A 394 QYDKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAATRP 441 (475)
T ss_dssp HHHHHHHTTCSCHHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHHTTSG
T ss_pred HHHHHhhcccceeeecccCccccchhHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999987 99999999999999999997643
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=3.9e-109 Score=848.66 Aligned_cols=423 Identities=39% Similarity=0.725 Sum_probs=376.5
Q ss_pred CEeEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeeccc
Q 013113 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRT 80 (449)
Q Consensus 1 M~eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~ 80 (449)
|||||+||+||||||||++||++++.||+++++|.+..++. ....+++++||+|+..++|+||+|+|||||++|+.++.
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~-~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~ 79 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSN-AAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEG 79 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC--------CCCTTTEEEEETTEEEECEEEEEECC--------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCccc-ccccccccceeeecCCCceeeeeEEEecCccccccccc
Confidence 99999999999999999999999999999999998765431 12356799999999999999999999999999999999
Q ss_pred cccccccCccccccCcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhh
Q 013113 81 GSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160 (449)
Q Consensus 81 ~~~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~de 160 (449)
++++.+|+|++++.+++|+||||++|||+.|+++.|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|.|+|+
T Consensus 80 ~~~~~lf~p~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~ 159 (426)
T 2btq_B 80 GDMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQA 159 (426)
T ss_dssp ----CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTT
T ss_pred cccccccCcccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhcccc
Q 013113 161 YGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240 (449)
Q Consensus 161 yp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 240 (449)
||++.+++++|+|++..+++++++||++|++++|.+++|++|++||++|+++|.+.++ ..++|.++|++||++|+++|.
T Consensus 160 y~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-~~~~f~~~N~lia~~v~~it~ 238 (426)
T 2btq_B 160 YPKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTA 238 (426)
T ss_dssp CTTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-SCCCHHHHHHHHHHHHHHHHH
T ss_pred cCcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-CCcHHHHHHHHHHhhhcchhh
Confidence 9999999999999987789999999999999999999999999999999999999998 889999999999999999999
Q ss_pred ccccCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCceeeeeeccc
Q 013113 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYR 320 (449)
Q Consensus 241 ~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 320 (449)
++||||.+|.|+.++.++|+|||++||++++++|+++..+..+++.++.++++++|+++|+|.+|+|+.++|+++++++|
T Consensus 239 ~lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~r 318 (426)
T 2btq_B 239 SLRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFR 318 (426)
T ss_dssp HHHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEE
T ss_pred hccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHc
Confidence 99999999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCcccccccCC--CCceeeecCCCCccCCCCCcccccceeEEeecChhhHHHHHHHHHHHHHH
Q 013113 321 GDVVPKDVNAAVATIKTKRTVQFVDWCP--TGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLM 398 (449)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~~~f~~w~p--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~~ 398 (449)
|++.++++.+++..+ |++..|++|+| +++|+++|+++|... +.++++|+|+|+|.+.|+++.++|++|
T Consensus 319 G~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~k~~i~~~~p~~~--------~~s~~~lsNstaI~~~~~~~~~~f~~m 388 (426)
T 2btq_B 319 GDVKAKDVDENMATI--RKSLNYASYMPASGGLKLGYAETAPEGF--------ASSGLALVNHTGIAAVFERLIAQFDIM 388 (426)
T ss_dssp CC----CTTTTHHHH--HTTSCBCTTSCSSCSEEEEEESCCCTTC--------SSBCCEEEEEGGGHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH--hcCCCCcccCCCCCceeeeeeccCCCCC--------cceeEEecCChHHHHHHHHHHHHHHHH
Confidence 999999999888877 67889999999 999999999998654 568999999999999999999999999
Q ss_pred hhccccccccccCCCChhhHHHHHHHHHHHHHHHHHh
Q 013113 399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 435 (449)
Q Consensus 399 ~~rkAflH~Y~~~Gmee~eF~Ea~~~l~~li~~Y~~~ 435 (449)
|+||||||||++|||||+||.||+++|++|+++|+++
T Consensus 389 ~~rrAflh~Y~~eGmee~eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 389 FDNHAYTHWYENAGVSRDMMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp HHTTSSHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccchhhhccCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999986
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=3.3e-108 Score=849.42 Aligned_cols=427 Identities=38% Similarity=0.749 Sum_probs=391.3
Q ss_pred CEeEEEEecCcchhHHHHHHHHHHHHHhCCCCC-CCCCCCCCccccccccccccc---cCCCCCcCccceeeCCCCceee
Q 013113 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPD-GMMPSDNTIGVAHDAFNTFFS---ETSAGRHVPRAVFVDLEPTVID 76 (449)
Q Consensus 1 M~eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~~~f~---e~~~~~~~pR~llvD~e~~~i~ 76 (449)
|||||+||+||||||||.+||+++|+||+++++ |.++.++.. .+++++||+ |++.++|+||+|+|||||++|+
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~~---~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~ 79 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAP---RGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVID 79 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCC---SSSGGGTEEECSCC--CCEEECEEEEESSSHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCcc---cccccceecccccccCCceeeeeeEecCcchhhh
Confidence 999999999999999999999999999999999 887654331 568999999 9999999999999999999999
Q ss_pred eccccccccccCccccccCcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHH
Q 013113 77 EVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156 (449)
Q Consensus 77 ~i~~~~~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~ 156 (449)
.++.++ +.+|+|++++++++|+||||++|||+.|+++.|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|.
T Consensus 80 ~i~~~~-~~lf~p~~~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~ 158 (473)
T 2bto_A 80 NVKATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIES 158 (473)
T ss_dssp HHHHHS-TTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHH
T ss_pred hhhccc-cccccccceEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHH
Confidence 999988 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHh
Q 013113 157 LSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIIS 236 (449)
Q Consensus 157 l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~ 236 (449)
|+|+||++.+++++|+|++..+++++++||++|++++|.+++|++|+++|++|+++|.+.+++..++|.++|++||+.|+
T Consensus 159 l~e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~ 238 (473)
T 2bto_A 159 LKEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALA 238 (473)
T ss_dssp HHHHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcc
Confidence 99999999999999999987789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCccc--hhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCceee
Q 013113 237 SLTTSLRFDGAINVD--ITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMA 314 (449)
Q Consensus 237 ~~t~~~r~~~~~~~~--l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls 314 (449)
++|.++||||.+|.| +.++.++|||||++||++++++|+.+.....++..++.++++++|++.|+|.+|+|+.++|++
T Consensus 239 ~it~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla 318 (473)
T 2bto_A 239 GITASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLS 318 (473)
T ss_dssp HHHHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEE
T ss_pred cchhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHH
Confidence 999999999999999 999999999999999999999999998888889999999999999999999999999999999
Q ss_pred eeecccccCChhhH-HHHHHhhhccCcccccccCCCCceeeecCCCCccCCCCCcccccceeEEeecChhhHHHHHHHHH
Q 013113 315 CCLMYRGDVVPKDV-NAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDH 393 (449)
Q Consensus 315 ~~~~~RG~~~~~~~-~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~ 393 (449)
+++++||++.++++ .+++..++.+++..| |+|+++|+++|+++|... +.++++|+|+|+|.+.|+++.+
T Consensus 319 ~~~i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~g~--------~~s~~~lsNsTaI~~~~~~l~~ 388 (473)
T 2bto_A 319 TAVLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGISH--------RKSMVLLANNTEIARVLDRICH 388 (473)
T ss_dssp EEEEEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCSSC--------SEEEEEEEEETTHHHHHHHHHH
T ss_pred HHHhhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCcCc--------ceeEEEecCCchHHHHHHHHHH
Confidence 99999999999999 999999998888888 999999999999998743 6799999999999999999999
Q ss_pred HHHHHhhccccccccccCCCChhhHHHHHHHHHHHHHHHHHhccCCCC
Q 013113 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGVD 441 (449)
Q Consensus 394 ~~~~~~~rkAflH~Y~~~Gmee~eF~Ea~~~l~~li~~Y~~~~~~~~~ 441 (449)
+|++||+||||||||++|||||+||.||+++|++|+++|++++.+..+
T Consensus 389 kf~~m~~rrAflH~Y~~eGmee~eF~EA~e~l~~l~~eY~~~~~~~~~ 436 (473)
T 2bto_A 389 NFDKLWQRKAFANWYLNEGMSEEQINVLRASAQELVQSYQVAEESGAK 436 (473)
T ss_dssp HHHHHHTTTTTHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHhhhcchhHHhhccCCcHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999999999999755443
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1e-43 Score=354.10 Aligned_cols=287 Identities=15% Similarity=0.219 Sum_probs=238.9
Q ss_pred CEeEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeeccc
Q 013113 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRT 80 (449)
Q Consensus 1 M~eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~ 80 (449)
|++|++|++|||||+++.++|+ |+++ + ++.+.+|+|.+.++.+..
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~-----~gi~---------------------------g---v~~ia~nTD~q~L~~~~a 65 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIE-----IGIH---------------------------G---VEFVAVNTDLQVLEASNA 65 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHH-----HCCT---------------------------T---EEEEEEESCHHHHHTCCC
T ss_pred CCEEEEECcCchHHHHHHHHHH-----hCCC---------------------------C---CCEEEEcCCHHHHhcCCC
Confidence 5789999999999999999997 3331 1 367888888887665432
Q ss_pred cccccccCccccc-----cCcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHH
Q 013113 81 GSYRQLFHPEQLI-----SGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155 (449)
Q Consensus 81 ~~~~~~~~~~~~~-----~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e 155 (449)
|+.+. +...|+||||+.| ++..++.+|.||+.+|.|| +|+++||+|||||||+|+.|++
T Consensus 66 --------~~~i~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~ 129 (353)
T 1w5f_A 66 --------DVKIQIGENITRGLGAGGRPEIG-----EQAALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAK 129 (353)
T ss_dssp --------SEEEECCTTTTTTSCCTTCHHHH-----HHHHHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHH
T ss_pred --------CcEEEccCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHH
Confidence 22333 3346999999965 7888999999999999998 4899999999999999999999
Q ss_pred HhhhhcCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHH
Q 013113 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQII 235 (449)
Q Consensus 156 ~l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i 235 (449)
.+++ |+ +++++|+|.+...|..+++||+.+++++|.+++|++|++||++|+++|.+.+++. ++|+.+|++|++.+
T Consensus 130 ~~ke-~g---~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~v 204 (353)
T 1w5f_A 130 IAKE-MG---ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIK-DAFLKADETLHQGV 204 (353)
T ss_dssp HHHH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHH-HHHHHHHHHHHHHH
T ss_pred HHHH-hC---CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHH-HHHHHHHHHHHHHh
Confidence 9987 65 5666666555556889999999999999999999999999999999998888886 68999999999999
Q ss_pred hccccccccCCCCcc--chhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCcee
Q 013113 236 SSLTTSLRFDGAINV--DITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYM 313 (449)
Q Consensus 236 ~~~t~~~r~~~~~~~--~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 313 (449)
+++|.++||||.+|. |+.++.++|+| |++||+..+.+.- .....+++++.+ .+++..|+++.++++
T Consensus 205 ~~it~~ir~pG~iNv~~D~~dv~t~L~~-~g~a~~g~g~a~g---------~~~v~ea~~~a~--~~~ll~~d~~~ak~~ 272 (353)
T 1w5f_A 205 KGISELITKRGYIRLTSRFARIESVMKD-AGAAILGIGVGKG---------EHRAREAAKKAM--ESKLIEHPVENASSI 272 (353)
T ss_dssp HHHHHHHHCCCCCCHHHHHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHH--TCTTCCSCGGGCSEE
T ss_pred cCchhhccCCcccccccCHHHHHHhccC-CCeeEEEEeecCC---------cchHHHHHHHHH--hCCCcCCChhhccee
Confidence 999999999999999 99999999999 9999887765421 135778888888 356777999999999
Q ss_pred eeeecccccCChhhHHHHHHhhhccCcccccccCCCCceeeecCCCCc
Q 013113 314 ACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPT 361 (449)
Q Consensus 314 s~~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 361 (449)
.+++..||++.+.++.+.+..++.+... +..++++.+..++.
T Consensus 273 l~~i~~~~dl~~~ev~~a~~~I~~~~~~------~~~i~~G~~~d~~~ 314 (353)
T 1w5f_A 273 VFNITAPSNIRMEEVHEAAMIIRQNSSE------DADVKFGLIFDDEV 314 (353)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHTTSCT------TSEEEEEEEECTTS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhhCC------CCcEEEEEEeCCCC
Confidence 9999999999999999998888765421 56677777766543
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=1.4e-43 Score=353.89 Aligned_cols=283 Identities=17% Similarity=0.260 Sum_probs=237.0
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeeccccc
Q 013113 3 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGS 82 (449)
Q Consensus 3 eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~~ 82 (449)
+|++|++|||||++++++|+. ++. | -..+.+|+|.+.++.+..
T Consensus 39 ~I~vIGvGg~G~n~v~~m~~~-----gi~--g----------------------------v~fia~NTD~q~L~~~~a-- 81 (364)
T 2vap_A 39 KITVVGCGGAGNNTITRLKME-----GIE--G----------------------------AKTVAINTDAQQLIRTKA-- 81 (364)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----TCT--T----------------------------EEEEEEESBHHHHHTSCC--
T ss_pred eEEEEeeCchHHHHHHHHHHh-----CCC--C----------------------------CCEEEEcCcHHHHhcCCC--
Confidence 699999999999999999984 321 0 134777777776654432
Q ss_pred cccccCccccc-----cCcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHh
Q 013113 83 YRQLFHPEQLI-----SGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157 (449)
Q Consensus 83 ~~~~~~~~~~~-----~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l 157 (449)
|+.+. +...|+||||+.| ++..++.+|.||+.+|.||.+ +++||+|||||||+|+.|++.+
T Consensus 82 ------~~ki~iG~~~t~G~GAGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~l 147 (364)
T 2vap_A 82 ------DKKILIGKKLTRGLGAGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEIS 147 (364)
T ss_dssp ------SEEEECCTTTTTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHH
T ss_pred ------CcEEEeccccccCCCCCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHH
Confidence 22232 3456999999987 789999999999999999987 9999999999999999999999
Q ss_pred hhhcCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhc
Q 013113 158 SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237 (449)
Q Consensus 158 ~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (449)
++ | .+++++|+|.+...+.++++||+.+++++|.+++|++|++||++|+++|. .+++ .++|..+|++|++.+++
T Consensus 148 ke-~---~~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i-~~af~~~N~li~~~v~~ 221 (364)
T 2vap_A 148 KK-I---GALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPL-KLAFKVADEVLINAVKG 221 (364)
T ss_dssp HH-T---TCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCH-HHHHHHHHHHHHHHHHH
T ss_pred HH-h---CCcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCCh-hhhhhhHHHHHHHHHhh
Confidence 98 7 35666666665556889999999999999999999999999999999998 8887 78999999999999999
Q ss_pred cccccccCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCceeeeee
Q 013113 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCL 317 (449)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~ 317 (449)
+|.++||||.+|.|+.++.++|+| |++||+..++++- .....+++++.+ .+++..++++.++|+.+++
T Consensus 222 it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~--~~~ll~~d~~~ak~~l~~i 289 (364)
T 2vap_A 222 LVELITKDGLINVDFADVKAVMNN-GGLAMIGIGESDS---------EKRAKEAVSMAL--NSPLLDVDIDGATGALIHV 289 (364)
T ss_dssp HHHHHHSCCSBCCCHHHHHHHHTT-CEEEEEEEEEECS---------TTHHHHHHHHHH--TCTTCCSCGGGCCEEEEEE
T ss_pred hhHHhhcCCceeccHHHHHHhccC-CCeeEEEEEecCC---------cchHHHHHHHHH--hCcCcCcChhhcceEEEEE
Confidence 999999999999999999999999 9999988776532 124778888888 4677889999999999999
Q ss_pred cccccCChhhHHHHHHhhhccCcccccccCC-CCceeeecCCCCc
Q 013113 318 MYRGDVVPKDVNAAVATIKTKRTVQFVDWCP-TGFKCGINYQPPT 361 (449)
Q Consensus 318 ~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p-~~~~~~~~~~~~~ 361 (449)
..||++++.++.+.+..++.+.. | ..++++.+..++.
T Consensus 290 ~~~~dl~~~ev~~a~~~I~~~~~-------~~a~ii~G~~~~~~~ 327 (364)
T 2vap_A 290 MGPEDLTLEEAREVVATVSSRLD-------PNATIIWGATIDENL 327 (364)
T ss_dssp EECTTCCHHHHHHHHHHHHHHSC-------TTCEEEEEEEECTTC
T ss_pred EeCCCCCHHHHHHHHHHHHHhcC-------CCCCEEEEEEecCCC
Confidence 99999999999999888876532 3 4566777766554
No 8
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=6.5e-44 Score=354.62 Aligned_cols=296 Identities=16% Similarity=0.259 Sum_probs=250.0
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeeccccc
Q 013113 3 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGS 82 (449)
Q Consensus 3 eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~~ 82 (449)
.|..|++|++|+++..++|+. ++ .+ +|.|++|+|+..++.+..
T Consensus 9 ~I~viGvGg~G~n~vn~m~~~-----~~---------------------------~g---v~~ia~NTD~q~L~~~~a-- 51 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYED-----GI---------------------------EG---VELYAINTDVQHLSTLKV-- 51 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHHT-----TC---------------------------CS---CEEEEEESBHHHHHTCCC--
T ss_pred eEEEEeeCccHHHHHHHHHHh-----CC---------------------------CC---ceEEEEECCHHHHhcCCC--
Confidence 488999999999999999973 11 11 688999999998876543
Q ss_pred cccccCcccccc-----CcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHh
Q 013113 83 YRQLFHPEQLIS-----GKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157 (449)
Q Consensus 83 ~~~~~~~~~~~~-----~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l 157 (449)
++.+.. ..+|+||||+.| ++..++.+|.||+++|.||.+ +++||+|||||||+++. ++.+
T Consensus 52 ------~~ki~iG~~~t~g~GAGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l 116 (338)
T 2r75_1 52 ------PNKIQIGEKVTRGLGAGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKT 116 (338)
T ss_dssp ------SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHH
T ss_pred ------CcEEEecCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHH
Confidence 233333 458999999965 799999999999999999988 99999999999999999 6678
Q ss_pred hhhcCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhc
Q 013113 158 SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237 (449)
Q Consensus 158 ~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (449)
+++|| +++++|+|.+...|.++++||+++++++|.+++|++|++||++|+++|.+.+++. ++|+++|++|++.+++
T Consensus 117 ~~e~g---~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~N~~i~~~v~~ 192 (338)
T 2r75_1 117 AKEMG---ILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIK-DAFKEVDSVLSKAVRG 192 (338)
T ss_dssp HHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHH-HHHHHHHHHHHHHHHH
T ss_pred HHhcC---CCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChH-HHHHHHHHHHHHHHhh
Confidence 88886 6778888877667999999999999999999999999999999999999888887 7999999999999999
Q ss_pred cccccccCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCceeeeee
Q 013113 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCL 317 (449)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~ 317 (449)
+|.++||||.+|.|+.++.++|+|+ +++|+..+++|- ...........++..+|+ .|++..+++ +++
T Consensus 193 it~~ir~pG~iNvD~~dv~t~L~~~-g~a~~g~g~a~g----~~r~~~a~~~ai~s~lle-~n~~~~a~~-------~l~ 259 (338)
T 2r75_1 193 ITSIVVTPAVINVDFADVRTTLEEG-GLSIIGMGEGRG----DEKADIAVEKAVTSPLLE-GNTIEGARR-------LLV 259 (338)
T ss_dssp HHHHHHSCCSBCCCHHHHHHHHTTC-EEEEEEEEEEES----TTHHHHHHHHHHHCBSSB-SSCGGGCSE-------EEE
T ss_pred hhhhhccCCceeCCHHHhhhheeCC-ccceeeeccCCc----cchHHHHHHHHHHhhhhc-ccchhhhhe-------EEE
Confidence 9999999999999999999999999 889998888872 222333445777888888 777777654 788
Q ss_pred cccc--cCChhhHHHHHHhhhccCcccccccCCCCceeeecCCCCccCCCCCcccccceeEEeecC
Q 013113 318 MYRG--DVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNN 381 (449)
Q Consensus 318 ~~RG--~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~ 381 (449)
++|| ++.+.++.+.+..++.+. + .|.+++++++..+|... +.++|+|+|.
T Consensus 260 ~i~G~~dl~~~ev~~a~~~I~~~~-----~-~~~~i~~G~~~~~~~~~--------~~~vtviatg 311 (338)
T 2r75_1 260 TIWTSEDIPYDIVDEVMERIHSKV-----H-PEAEIIFGAVLEPQEQD--------FIRVAIVATD 311 (338)
T ss_dssp EEEECTTSCTTHHHHHHHHHHHHS-----C-TTCEEEEEEEECTTCCS--------EEEEEEEEEC
T ss_pred EEEcCCCCCHHHHHHHHHHHHHhc-----C-CCCcEEEEEEeCCCCCC--------eEEEEEEECC
Confidence 9999 899999999988887654 3 68899999998877632 5778888886
No 9
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=9.9e-43 Score=343.95 Aligned_cols=295 Identities=15% Similarity=0.198 Sum_probs=239.5
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeeccccc
Q 013113 3 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGS 82 (449)
Q Consensus 3 eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~~ 82 (449)
+|++|++|||||+++.++|+ |++. + ++.+.+|+|.+.++.+..
T Consensus 13 ~I~viGvGg~G~n~v~~m~~-----~gi~---------------------------g---v~~i~~ntD~q~L~~~~a-- 55 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAK-----NNVE---------------------------G---VEFICANTDAQALKNIAA-- 55 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------S---EEEEEEESBTGGGSSCSC--
T ss_pred EEEEECcCchHHHHHHHHHH-----hCCC---------------------------C---CCEEEEcCCHHHHhcCCC--
Confidence 69999999999999999997 3321 1 467889998887765542
Q ss_pred cccccCcccccc-----CcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHh
Q 013113 83 YRQLFHPEQLIS-----GKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157 (449)
Q Consensus 83 ~~~~~~~~~~~~-----~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l 157 (449)
|+.+.. ...|+||||+.| ++..++.+|.||+.+|.|| +|+++||+|||||||+|+.|++ +
T Consensus 56 ------~~~i~iG~~~t~g~GAG~n~~~G-----~~~~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~la~-~ 120 (320)
T 1ofu_A 56 ------RTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAE-V 120 (320)
T ss_dssp ------SEEEECCHHHHTTBCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-H
T ss_pred ------CcEEEccCCccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-H
Confidence 233333 356999999955 7888999999999999998 4899999999999999998766 4
Q ss_pred hhhcCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhc
Q 013113 158 SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237 (449)
Q Consensus 158 ~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (449)
..+|+ +++++|+|.+...|..+++||+.+++++|.+++|++|++||++|+++|.+.+++. ++|+.+|++|++.+++
T Consensus 121 a~e~g---~lt~~vv~~P~~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~n~~l~~~v~~ 196 (320)
T 1ofu_A 121 AKEMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRG 196 (320)
T ss_dssp HHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHH
T ss_pred HHhcC---CcEEEEEeCCccccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHH-HHHHHHHHHHHHHhcc
Confidence 46673 4555555444446889999999999999999999999999999999999888886 6899999999999999
Q ss_pred cccccccCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcc-cCCCCCceeeee
Q 013113 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAK-CDPRHGKYMACC 316 (449)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~ls~~ 316 (449)
+|.++||||.+|.|+.++.++|+| |+++|+..++++- .....+++++.++ +++.. |+++.++|+.++
T Consensus 197 it~~ir~pG~iNvD~~dv~t~l~~-~g~~~~g~g~a~g---------~~~~~~a~~~a~~--~~ll~~~d~~~ak~~l~~ 264 (320)
T 1ofu_A 197 ISDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR--NPLLEDVNLQGARGILVN 264 (320)
T ss_dssp HHHHHHSCSSSSCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCCGGGCSEEEEE
T ss_pred cHhhcccCCceeecHHHHHHhccC-CCeeEEEEEecCc---------ccHHHHHHHHHHh--ccccccCCccccceEEEE
Confidence 999999999999999999999999 9999988776532 1235778888887 45665 899999999999
Q ss_pred ecccccCChhhHHHHHHhhhccCcccccccCCCCceeeecCCCCccCCCCCcccccceeEEee
Q 013113 317 LMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIS 379 (449)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 379 (449)
+..||++.+.++.+.+..++.+... +..++++.+..++... +..+|+++
T Consensus 265 i~~~~d~~~~ev~~a~~~i~~~~~~------~~~ii~G~~~~~~~~~--------~v~vtvia 313 (320)
T 1ofu_A 265 ITAGPDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMRD--------ELHVTVVA 313 (320)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECTTCCS--------EEEEEEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcCC------CCcEEEEEEcCCCCCC--------eEEEEEEE
Confidence 9999999999999998888765322 4567777776655421 45566665
No 10
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=8e-43 Score=350.00 Aligned_cols=286 Identities=14% Similarity=0.182 Sum_probs=232.0
Q ss_pred EeEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeecccc
Q 013113 2 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTG 81 (449)
Q Consensus 2 ~eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~ 81 (449)
.+|++|++|||||+++.++|+ |++. + .+.+.+|+|.+.++.+..
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~---------------------------g---v~fia~NTD~q~L~~~~a- 55 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIE-----QGLK---------------------------G---VEFIAINTDAQALLMSDA- 55 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------S---EEEEEEESCHHHHHHCCC-
T ss_pred CEEEEECcCchHHHHHHHHHH-----hCCC---------------------------C---CCEEEecCCHHHHhcCCC-
Confidence 479999999999999999997 3321 1 467899998887765542
Q ss_pred ccccccCcccccc-----CcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHH
Q 013113 82 SYRQLFHPEQLIS-----GKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156 (449)
Q Consensus 82 ~~~~~~~~~~~~~-----~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~ 156 (449)
|+.+.. ...|+||||+.| ++..++.+|.||+.+|.|| +|+|+||+|||||||+++.|++
T Consensus 56 -------~~~i~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae- 119 (382)
T 1rq2_A 56 -------DVKLDVGRDSTRGLGAGADPEVG-----RKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS- 119 (382)
T ss_dssp -------SEEEECCTTTC-----CCCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-
T ss_pred -------CcEEEecccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-
Confidence 233333 346999999965 6888999999999999998 5899999999999999999998
Q ss_pred hhhhcCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHh
Q 013113 157 LSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIIS 236 (449)
Q Consensus 157 l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~ 236 (449)
|+.+|+ +..+++++.|+ ..|..+++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++
T Consensus 120 la~e~g-~ltvsVv~~Pf--~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~vs 195 (382)
T 1rq2_A 120 IARKLG-ALTVGVVTRPF--SFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLM-DAFRSADEVLLNGVQ 195 (382)
T ss_dssp HHHHHT-CEEEEEEEECC--GGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHcC-CcEEEEEecCc--ccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHH-HHHHHHHHHHHHHHH
Confidence 777787 44444445554 46889999999999999999999999999999999999888886 689999999999999
Q ss_pred ccccccccCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCceeeee
Q 013113 237 SLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACC 316 (449)
Q Consensus 237 ~~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~ 316 (449)
++|.++||||.+|.|+.++.++|+| |+++|+..+.+.- .....+++++.++ +++..|+++.++|+.++
T Consensus 196 ~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~ 263 (382)
T 1rq2_A 196 GITDLITTPGLINVDFADVKGIMSG-AGTALMGIGSARG---------EGRSLKAAEIAIN--SPLLEASMEGAQGVLMS 263 (382)
T ss_dssp HHHHHHHSBCSSCCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCGGGCSEEEEE
T ss_pred HHHHHHccCCceeccHHHHHHhccC-CCeeEEEeeeccc---------ccHHHHHHHHHHh--CcCcCCChhchheEEEE
Confidence 9999999999999999999999999 8888887765421 1346778888874 77888999999999877
Q ss_pred ecccccCChhhHHHHHHhhhccCcccccccCCCCceeeecCCCCc
Q 013113 317 LMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPT 361 (449)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 361 (449)
+..++++.+.++.+.+..++.+.. .+..++++.+..++.
T Consensus 264 i~gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~ 302 (382)
T 1rq2_A 264 IAGGSDLGLFEINEAASLVQDAAH------PDANIIFGTVIDDSL 302 (382)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECGGG
T ss_pred EEeCCCCCHHHHHHHHHHHHHhhC------CCCCEEEEEEeCCCC
Confidence 766668999999999888876532 356777887766543
No 11
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=2.9e-42 Score=347.22 Aligned_cols=298 Identities=14% Similarity=0.197 Sum_probs=243.3
Q ss_pred EeEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeecccc
Q 013113 2 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTG 81 (449)
Q Consensus 2 ~eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~ 81 (449)
.+|++|++|||||+++.++|+ |+++ + .+.+.+|+|.+.++.+..
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~---------------------------g---v~fia~NTD~q~L~~~~a- 55 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAK-----NNVE---------------------------G---VEFICANTDAQALKNIAA- 55 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHT-----TTCC---------------------------S---EEEEEEESCTTTTSSCSS-
T ss_pred CEEEEECcCchHHHHHHHHHH-----cCCC---------------------------C---CCEEEecCCHHHHhcCCC-
Confidence 479999999999999999996 3321 1 367889988887765432
Q ss_pred ccccccCcccccc-----CcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHH
Q 013113 82 SYRQLFHPEQLIS-----GKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156 (449)
Q Consensus 82 ~~~~~~~~~~~~~-----~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~ 156 (449)
++.+.. ...|+||||+.| ++..++.+|.||+.+|.|| +|+|+||+|||||||+|+.|++.
T Consensus 56 -------~~ki~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~ 120 (394)
T 2vaw_A 56 -------RTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEV 120 (394)
T ss_dssp -------SCEEECCHHHHSSSCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHH
T ss_pred -------CcEEEccccccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHH
Confidence 233333 356999999965 6888999999999999998 58999999999999999999999
Q ss_pred hhhhcCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHh
Q 013113 157 LSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIIS 236 (449)
Q Consensus 157 l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~ 236 (449)
++ +|+ +++++|+|.+...|..+++||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++
T Consensus 121 ~k-e~g---~ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~v~ 195 (394)
T 2vaw_A 121 AK-EMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVR 195 (394)
T ss_dssp HH-HHT---CEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHH
T ss_pred HH-HcC---CcEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChH-HHHHHHHHHHHHHHH
Confidence 99 563 5555666544456889999999999999999999999999999999999888886 589999999999999
Q ss_pred ccccccccCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCceeeee
Q 013113 237 SLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACC 316 (449)
Q Consensus 237 ~~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~ 316 (449)
++|.++||||.+|.|+.++.++|+| |+++++..+.+.- .....+++++.|+ .+++..|+++.++|+.++
T Consensus 196 ~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~rv~ea~~~A~~-spLl~~~d~~~ak~~lv~ 264 (394)
T 2vaw_A 196 GISDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR-NPLLEDVNLQGARGILVN 264 (394)
T ss_dssp HHHHHHHSBCSSCCCHHHHHHHHTT-TCCBEEEEEEECS---------TTHHHHHHHHHHT-CGGGTTCCTTTCSEEEEE
T ss_pred HHHHHhcCCCcccccHHHHHHhccC-CCceeEEEEeccc---------cchHHHHHHHHHh-cCccCCCCccccceeEEE
Confidence 9999999999999999999999999 7888877654421 1357889999998 556666899999999999
Q ss_pred ecccccCChhhHHHHHHhhhccCcccccccCCCCceeeecCCCCccCCCCCcccccceeEEeec
Q 013113 317 LMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN 380 (449)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N 380 (449)
+..|+++...++.+.+..++.+.. .+..++++.+..++... +..+|+|+-
T Consensus 265 i~~~~dl~~~ev~~a~~~I~~~~~------~~a~i~~G~~~d~~~~~--------~v~VtvIat 314 (394)
T 2vaw_A 265 ITAGPDLSLGEYSDVGNIIEQFAS------EHATVKVGTVIDADMRD--------ELHVTVVAT 314 (394)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSC------TTSEEEEEEEECSSCCS--------CEEEEEEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCCCCC--------eEEEEEEEc
Confidence 999999999999999888876532 14567777777665421 445666653
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=4.6e-42 Score=344.52 Aligned_cols=291 Identities=14% Similarity=0.183 Sum_probs=236.1
Q ss_pred EeEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeecccc
Q 013113 2 REIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTG 81 (449)
Q Consensus 2 ~eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~ 81 (449)
.+|.+|++||||++++.++|+. ++. + .+.|.+|+|...++.+...
T Consensus 12 ~~I~vIGvGg~G~navn~m~~~-----gi~---------------------------g---v~fia~NTD~q~L~~~~a~ 56 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIEN-----EVQ---------------------------G---VEYIAVNTDAQALNLSKAE 56 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHT-----TCC---------------------------S---CEEEEEESBHHHHHTCCCS
T ss_pred CEEEEEeeCchHHHHHHHHHHh-----CCC---------------------------C---CCEEEEeCCHHHHhcCCCC
Confidence 3699999999999999999972 221 1 4679999988877655421
Q ss_pred ccccccCccccccCcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhc
Q 013113 82 SYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 161 (449)
Q Consensus 82 ~~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~dey 161 (449)
.+-+.. ..++...|+||||+.| ++..++.+|.||+.+|.|| +|+|+||+|||||||+|+.|++.+++ |
T Consensus 57 -~ki~iG--~~~t~G~GAGnn~a~G-----~e~aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~ake-~ 124 (382)
T 2vxy_A 57 -VKMQIG--AKLTRGLGAGANPEVG-----KKAAEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQIAKD-L 124 (382)
T ss_dssp -EEEECC--HHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHHHHH-T
T ss_pred -cEEEec--ccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHHHHH-h
Confidence 110111 1223456999999965 7888999999999999998 48999999999999999999998876 7
Q ss_pred CCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhccccc
Q 013113 162 GKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTS 241 (449)
Q Consensus 162 p~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 241 (449)
+ +++++|+|.+...|.++++||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++++|..
T Consensus 125 g---~ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~vsgIt~~ 200 (382)
T 2vxy_A 125 G---ALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPML-EAFREADNVLRQGVQGISDL 200 (382)
T ss_dssp T---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHH-HHHHHHHHHHHHHHHHHHTT
T ss_pred C---CCeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHHHHHH
Confidence 5 4555555555557899999999999999999999999999999999999888886 58999999999999999999
Q ss_pred cccCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCceeeeeecccc
Q 013113 242 LRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRG 321 (449)
Q Consensus 242 ~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG 321 (449)
+||||.+|.|+.++.++|+| |+++|+..+++.- .....+++++.++ +++..|+++.++|+.+++..++
T Consensus 201 ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~i~gg~ 268 (382)
T 2vxy_A 201 IATPGLINLDFADVKTIMSN-KGSALMGIGIATG---------ENRAAEAAKKAIS--SPLLEAAIDGAQGVLMNITGGT 268 (382)
T ss_dssp TSSCCTTCCCHHHHHHHTTC-SSEEEEEEEEEES---------TTHHHHHHHHHHT--CTTSCSCGGGCSEEEEEEEECT
T ss_pred HcCCCccccCHHHHHHhccC-CCceEEEEEeccc---------ccHHHHHHHHHHh--CcCcCCChhhcceeEEEEEeCC
Confidence 99999999999999999999 9999988775531 1346778888885 4677799999999987776666
Q ss_pred cCChhhHHHHHHhhhccCcccccccCCCCceeeecCCCCc
Q 013113 322 DVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPT 361 (449)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 361 (449)
++...++.+.+..++.+.. .+..++++.+..++.
T Consensus 269 dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~ 302 (382)
T 2vxy_A 269 NLSLYEVQEAADIVASASD------QDVNMIFGSVINENL 302 (382)
T ss_dssp TCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECTTC
T ss_pred CCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCCC
Confidence 8999999999888876532 255677777766543
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=100.00 E-value=5.3e-38 Score=313.93 Aligned_cols=278 Identities=13% Similarity=0.099 Sum_probs=218.3
Q ss_pred EEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeecccccc
Q 013113 4 IISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSY 83 (449)
Q Consensus 4 ii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~~~ 83 (449)
|..|.+||+|+.+.+++.+. + ..+++|.||+|+||+++.+++.++..+.
T Consensus 45 i~VIGvGg~G~n~v~~m~~~-----~--------------------------~~~g~~~~~~iavNtd~~dl~~L~~~~~ 93 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAGY-----K--------------------------FSNGTTCYPTLAVNFAESDMMHLQNIIK 93 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTTC-----B--------------------------CTTSCBSCCEEEEESSGGGGTTCSSSCG
T ss_pred EEEEEECCcHHHHHHHHHHh-----C--------------------------cccCCcCceEEEEECCHHHHHHHhcCCC
Confidence 67899999999999998531 0 1145788999999999999998876653
Q ss_pred ccccCcccc-ccCcccCCCCccccccccc-----hhh--HHHHHHHHHhhhh---hcCCCCCeeEEeeCCCCccccchhH
Q 013113 84 RQLFHPEQL-ISGKEDAANNFARGHYTVG-----KEI--VDLCLDRVRKLSD---NCTGLQGFLVFNAVGGGTGSGLGSL 152 (449)
Q Consensus 84 ~~~~~~~~~-~~~~~gsgnnwa~G~~~~g-----~~~--~~~~~d~ir~~~E---~cD~lqgf~~~~sl~GGtGSG~~~~ 152 (449)
++.+ +.++.|+|+||+.|++..| ++. .+++++.||+.+| .||.+|+|++++|+|||||||+|+.
T Consensus 94 -----~~~i~l~G~~GAG~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~ 168 (427)
T 3m89_A 94 -----EDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSL 168 (427)
T ss_dssp -----GGEEEC-----------CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHH
T ss_pred -----cceEEecCCCCCCCCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHH
Confidence 3444 5678999999999998874 544 8999999999999 8899999999999999999999999
Q ss_pred HHHHhhhhcCCcceeeEEEecCCCCCcccchhhHHHHHHHHh---hh------------cCCeeEEecChhhHhhhccCC
Q 013113 153 LLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSL---LE------------HTDVAVLLDNEAIYDICRRSL 217 (449)
Q Consensus 153 l~e~l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l---~e------------~~d~~i~~~N~~l~~~~~~~~ 217 (449)
|++.|+++|+++.+++++++|+.. + .++||+++++++| .+ ++|.+|++||++|..++.+..
T Consensus 169 la~~lke~~~~~~~~~vvt~P~~~--e--~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~~ 244 (427)
T 3m89_A 169 VLQLIREQFFPCPVSMLISLPSGD--P--DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQK 244 (427)
T ss_dssp HHHHHHTTCSSSCEEEEEEECCSC--H--HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSS
T ss_pred HHHHHHHhcCCCcEEEEEEECCCC--c--cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhcc
Confidence 999999999999999999999864 3 3459999999997 44 999999999999877765433
Q ss_pred C--C---CCCCcc-hhhHHHHHHHhcccccc-c-cCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChh
Q 013113 218 D--I---ERPTYT-NLNRLISQIISSLTTSL-R-FDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVP 289 (449)
Q Consensus 218 ~--~---~~~~~~-~~N~~ia~~i~~~t~~~-r-~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~ 289 (449)
. . ..++|+ .+|++|++.|.+++... + +||.+|.|+.++.++|.|.|. |.+.++++...... .++.
T Consensus 245 ~~~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G--~a~iG~a~~~~~d~-----~~~~ 317 (427)
T 3m89_A 245 GTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGR--FLTIGKARIAKFDL-----HSLE 317 (427)
T ss_dssp CSSSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCS--EEEEEEEEECSCSH-----HHHH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCC--eEEEEEecccccch-----hhHH
Confidence 2 1 234899 89999999999998865 4 799999999999999999987 66677777653221 2466
Q ss_pred hHHHHhcCCCCCCcccCCCCCceeeeeecccccCChhhH
Q 013113 290 EITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDV 328 (449)
Q Consensus 290 ~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~ 328 (449)
+.++..|++.+.+..+++..+++++++++..-+....+.
T Consensus 318 ~ai~~al~~~~Ll~~~d~~~Ak~~lv~i~g~~~~~~~~~ 356 (427)
T 3m89_A 318 NSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKD 356 (427)
T ss_dssp HHHHHHHHSSTTCSCCCGGGCCEEEEEEEEESSCGGGGC
T ss_pred HHHHHHHhCCCcccccCcccccEEEEEEEeCchhhhhhh
Confidence 788888988888888999999999988877655444333
No 14
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.97 E-value=1.2e-31 Score=266.24 Aligned_cols=267 Identities=13% Similarity=0.219 Sum_probs=203.3
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeeccccc
Q 013113 3 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGS 82 (449)
Q Consensus 3 eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~~ 82 (449)
-|..|.+|++|+.+-.+..+. ++. + ...|.++++...+..+..
T Consensus 19 ~IkVIGVGG~G~NaVn~m~~~-----~~~---------------------------g---vefiaiNTD~qaL~~s~a-- 61 (396)
T 4dxd_A 19 TLKVIGVGGGGNNAVNRMIDH-----GMN---------------------------N---VEFIAINTDGQALNLSKA-- 61 (396)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----CCC---------------------------S---EEEEEEESCHHHHHTCCC--
T ss_pred eEEEEEECCcHHHHHHHHHHh-----CCC---------------------------C---ceEEEEECCHHHHhcCCC--
Confidence 377899999999999888754 111 0 234888887776654322
Q ss_pred cccccCccccccC-----cccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHh
Q 013113 83 YRQLFHPEQLISG-----KEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157 (449)
Q Consensus 83 ~~~~~~~~~~~~~-----~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l 157 (449)
++.+..+ ..|+|+||+.| ++..++.+|.||+.+|.|| +|+|+||+|||||||+++.|++ +
T Consensus 62 ------~~ki~lG~~~t~GlGAG~np~vG-----~eaaee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIae-i 126 (396)
T 4dxd_A 62 ------ESKIQIGEKLTRGLGAGANPEIG-----KKAAEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVAK-I 126 (396)
T ss_dssp ------SEEEECCHHHHTTSCCTTCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-H
T ss_pred ------ccEEEcCccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHHH-H
Confidence 1223222 35999998865 6888999999999999999 4899999999999999998776 5
Q ss_pred hhhcCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhc
Q 013113 158 SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237 (449)
Q Consensus 158 ~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (449)
..+|+ +++++|+|.+...|..+++||+++++++|.+++|++|++||++|+++|.+.+.+.. +|..+|++|++.+++
T Consensus 127 ake~g---~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~~-af~~aN~ll~q~Vsg 202 (396)
T 4dxd_A 127 AKEMG---ALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQG 202 (396)
T ss_dssp HHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHHH-HHHHHHHHHHHHHHH
T ss_pred HHhcC---CceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHHH-HHHHHHHHHHHHHHh
Confidence 56675 57777776665578899999999999999999999999999999999988888864 999999999999999
Q ss_pred cccccccCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCCCcccCCCCCceeeeee
Q 013113 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCL 317 (449)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~ 317 (449)
+|.++||||.+|.|+.++.++|.+. ...++..+.++-.. ...+..+..+ .+++...+....+.+...+
T Consensus 203 IT~~irfpG~iNvDfaDv~t~m~~~-G~A~mG~G~a~G~~---------ra~~A~~~Ai--~sPLL~~~i~gAkgvLvnI 270 (396)
T 4dxd_A 203 ISDLIAVSGEVNLDFADVKTIMSNQ-GSALMGIGVSSGEN---------RAVEAAKKAI--SSPLLETSIVGAQGVLMNI 270 (396)
T ss_dssp HHHHHHSCCTBCCCHHHHHHHHTTC-EECEEEEEEEESTT---------HHHHHHHHHH--CCSSCSSCSTTCCEEEEEE
T ss_pred hhhhhccCCcccCCHHHHHHHhhcC-CeEEEEEEeccCCc---------hHHHHHHHHH--hCccccCChhhhcceEEEE
Confidence 9999999999999999999999987 45666666554321 1222333333 2234444445555555555
Q ss_pred cccccCChhhHHHHHHhhhc
Q 013113 318 MYRGDVVPKDVNAAVATIKT 337 (449)
Q Consensus 318 ~~RG~~~~~~~~~~~~~~~~ 337 (449)
....++...++.+....++.
T Consensus 271 tgg~dl~l~Ev~~~~~~i~~ 290 (396)
T 4dxd_A 271 TGGESLSLFEAQEAADIVQD 290 (396)
T ss_dssp EECTTCCHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHH
Confidence 55567888888887666543
No 15
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.97 E-value=3.9e-31 Score=259.92 Aligned_cols=194 Identities=15% Similarity=0.208 Sum_probs=159.7
Q ss_pred EEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeecccccc
Q 013113 4 IISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSY 83 (449)
Q Consensus 4 ii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~~~ 83 (449)
|..|.+|++|+.+..++.+. +. + -+.|.++++...+..+..-+
T Consensus 7 I~VIGvGGaG~Nav~~m~~~-----~~----------------------------~---v~~iaiNTD~q~L~~~~~~~- 49 (360)
T 3v3t_A 7 IVFAPIGQGGGNIVDTLLGI-----CG----------------------------D---YNALFINTSKKDLDSLKHAK- 49 (360)
T ss_dssp EEEEEBSHHHHHHHHHHHHH-----CT----------------------------T---SEECEEESCHHHHHTCSSCS-
T ss_pred EEEEEeCCcHHHHHHHHHHc-----CC----------------------------C---ceEEEEECCHHHHhhCCCCc-
Confidence 78899999999999999754 10 0 25578888877766543211
Q ss_pred ccccCccccccCcccCCCCccccccccchhhHHHHH-HHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcC
Q 013113 84 RQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCL-DRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYG 162 (449)
Q Consensus 84 ~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~-d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp 162 (449)
.+-.+....|+|+||..| ++..++.. |.||+.+|+|+.+|||+++||+|||||||+|+.|++.|+++||
T Consensus 50 -----~ki~ig~GlGAG~np~vG-----~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~ 119 (360)
T 3v3t_A 50 -----HTYHIPYAEGCGKERKKA-----VGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYP 119 (360)
T ss_dssp -----CEEECC------CCHHHH-----HHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCT
T ss_pred -----cEEEcCCCCCCCCCHHHH-----HHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCC
Confidence 112233456999999876 57778888 9999999999999999999999999999999999999999999
Q ss_pred CcceeeEEEecCCCCCcccchhhHHHHHHHHhhh---cCCee--EEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhc
Q 013113 163 KKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLE---HTDVA--VLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237 (449)
Q Consensus 163 ~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e---~~d~~--i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~ 237 (449)
++++..++|+|++. +.++++||+++++++|.+ ++|.+ |++||++ .++|.++|++|++++++
T Consensus 120 ~k~v~~vtV~Pf~~--Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea------------~~ay~~lN~lIaq~vs~ 185 (360)
T 3v3t_A 120 NKHFGFVGVLPKAT--EDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK------------REKESDINKEFATLFND 185 (360)
T ss_dssp TSEEEEEEEECCTT--SCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG------------SSSHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCc--cchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC------------chhHHHHHHHHHHHHHH
Confidence 99999999999975 679999999999999999 55555 9999997 57899999999999999
Q ss_pred cccccccCCCCccchhhhhhc
Q 013113 238 LTTSLRFDGAINVDITEFQTN 258 (449)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~ 258 (449)
+|..+|+||.+|.|+.++.+-
T Consensus 186 lt~~l~~~G~iNVDfaDv~tv 206 (360)
T 3v3t_A 186 FMNMSESHAEGVVDEDEISKL 206 (360)
T ss_dssp HHGGGSCCSSCCCCHHHHHHH
T ss_pred HHHhhccCCceeeeHHHHHHH
Confidence 999999999999999999543
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=99.79 E-value=2.5e-19 Score=180.90 Aligned_cols=346 Identities=12% Similarity=0.077 Sum_probs=205.3
Q ss_pred EEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeecccccc
Q 013113 4 IISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSY 83 (449)
Q Consensus 4 ii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~~~ 83 (449)
|..|.+||||+.|.+.|... .. ..+...+..++|.|+++...+..+...
T Consensus 18 i~vIGvGgaG~~ivd~~~~~-----~~------------------------~~~~~~~~~~~iaiNTd~~~L~~~~~~-- 66 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECANK-----ET------------------------QIKNNKYPYRAILVNTNSQDFNKIEIK-- 66 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHTC-----CC------------------------CCTTCSCCCEEEEEECCCHHHHHSCCC--
T ss_pred EEEEEECCchHHHHHHHHhc-----cc------------------------ccccccccccEEEEECCHHHHhhccCc--
Confidence 67899999999999998732 10 011223446899999998887655321
Q ss_pred ccccCccccccCc--ccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhc
Q 013113 84 RQLFHPEQLISGK--EDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 161 (449)
Q Consensus 84 ~~~~~~~~~~~~~--~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~dey 161 (449)
........++.. .|+|+||..|+ ...++..+++.+.|+..++.+|. +++++++|||||+|.++.+++.+++.
T Consensus 67 -~~~~~g~~~~~g~g~GaG~~p~~G~-~aa~e~~~~i~~~l~~~~~~~d~---vfi~ag~GGGTGtGa~pvia~~~ke~- 140 (389)
T 4ei7_A 67 -NTGNVRKIQLEGYEQGAARNPQVGE-EAFVKHETKIFEAVKQEFEDRDF---IWITCGLGGGTGTGALLKAIEMLYEH- 140 (389)
T ss_dssp -SCSSEEEEECTTCCCTTCCCHHHHH-HHHHHTHHHHHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHHT-
T ss_pred -chhhhhhhccCCCCCCCCCChHHHH-HHHHHHHHHHHHHHHhhcCCccE---EEEEecCCCCCccccHHHHHHHHHHc-
Confidence 122222233322 49999999885 44567777888888877777774 59999999999999999999999985
Q ss_pred CCcceeeEEEecCCCCCcccchhhHHHHHHHHh---hhcCCeeEEecChhhHhhhccCCC--CCCCCcchhhHHHHHHHh
Q 013113 162 GKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSL---LEHTDVAVLLDNEAIYDICRRSLD--IERPTYTNLNRLISQIIS 236 (449)
Q Consensus 162 p~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l---~e~~d~~i~~~N~~l~~~~~~~~~--~~~~~~~~~N~~ia~~i~ 236 (449)
......++++|+.. |.....-|+.-++..| .+++|.+|++||+.|.++....-+ .-...|+..|++|++.+.
T Consensus 141 -~~~~~~vvt~Pf~~--Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~~~af~~an~~l~~~v~ 217 (389)
T 4ei7_A 141 -DYNFGLLLTLPRDA--EALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALH 217 (389)
T ss_dssp -TCCEEEEEEECCGG--GHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCGGGHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEEeCCCc--CchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 45677888899864 4444445555555555 678999999999999988754321 112468899999999877
Q ss_pred ccccccc---cCCCCccchhhhhhcCCCCCcccccccccccccccccccccccChhhHHHHhcCCCCC--CcccCCCCCc
Q 013113 237 SLTTSLR---FDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSM--MAKCDPRHGK 311 (449)
Q Consensus 237 ~~t~~~r---~~~~~~~~l~~~~~~L~p~p~~~fl~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~ 311 (449)
.++.... .+|.+|.|+.++.+-|-... +...+++................+.....+..... ...++....+
T Consensus 218 ~i~~~~~~~~~~g~in~D~aDv~~vm~~~G---~a~~G~~~~~~~~~~~~~~~~~~~a~~~ai~~~ll~~~~~~~i~~A~ 294 (389)
T 4ei7_A 218 EINLVTSSFTPFSDTHFDASEFAQVINTPG---VLSLAKLELKSNQLDTENPLGYLTQLGNALEKGVLYDTEREELESAK 294 (389)
T ss_dssp HHHHHTTSSEESSSCCCCHHHHHHHHTSSE---EEEEEEEEEEGGGCCTTSTHHHHHHHHHHHHBCSSSBCCHHHHTTCS
T ss_pred HHHHHHhCCCCCCeEEeeHHHHHHHhcCCC---EEEEEeeeccccccccccchHHHHHHHHHHhccccccccccChhhhh
Confidence 6644333 35889999999877654332 22223332211110000001111112221111110 0111222222
Q ss_pred eeeeeecccccCC------hhhHHHHHHhhhccCcccccccCCCCceeeecCCCCccCCCCCcccccceeEEeecChhhH
Q 013113 312 YMACCLMYRGDVV------PKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVA 385 (449)
Q Consensus 312 ~ls~~~~~RG~~~------~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~ 385 (449)
.. ...+..|... ...+.+.-..+ ..+..|.+......+....+... ......++++.++....
T Consensus 295 ~~-ll~I~~~~~~~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~~~i~~g~~~~~~-----~~~~V~v~viatG~~~~ 363 (389)
T 4ei7_A 295 KS-ALSIVTSPLRAGRLYNFSFLNQMENFL-----KERTPYVDERPIAPYVNKHTTKK-----EEDIVKFYSVVAGLPLP 363 (389)
T ss_dssp EE-EEEEEECHHHHHHHSSHHHHHHHHHHH-----HHHSTTCSCCCEEEEECTTCCGG-----GTTEEEEEEEEEEECCC
T ss_pred eE-EEEEEcCcccchhhhhHHHHHHHHHHH-----HhhccccCcccceEEecCCCCcC-----CCCeEEEEEEEecCCch
Confidence 22 2233333211 11111111111 12346666544444433332211 11245678899999988
Q ss_pred HHHHHHHHHHHHHhhccc
Q 013113 386 EVFSRIDHKFDLMYAKRA 403 (449)
Q Consensus 386 ~~l~~l~~~~~~~~~rkA 403 (449)
+.++++.+++.++..+++
T Consensus 364 ~~~~~~~~~~~~~~e~~~ 381 (389)
T 4ei7_A 364 KRVSDIIDEITRIKEERE 381 (389)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHH
Confidence 899999999998877663
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.35 E-value=6.1e-13 Score=126.08 Aligned_cols=173 Identities=18% Similarity=0.244 Sum_probs=120.2
Q ss_pred eEEEEecCcchhHHHHHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccCCCCCcCccceeeCCCCceeeeccccc
Q 013113 3 EIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGS 82 (449)
Q Consensus 3 eii~iq~GqcGnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~~~pR~llvD~e~~~i~~i~~~~ 82 (449)
.|..+.+|++|+.|.+.+++. + +.+|.||++.+-+.... .
T Consensus 4 ki~VvGvGGAG~Nii~rL~~~--------------------------------G------a~~iAiNTD~q~L~~~k--~ 43 (315)
T 3r4v_A 4 KVCLIFAGGTGMNVATKLVDL--------------------------------G------EAVHCFDTCDKNVVDVH--R 43 (315)
T ss_dssp SCEEEEEHHHHHHHHGGGGGG--------------------------------G------GGEEEEESSSTTCCGGG--G
T ss_pred eEEEEEEcCcchHHHHHHHHc--------------------------------C------CCEEEEECchHHhhhhh--h
Confidence 567789999999999887632 1 45678887776553221 0
Q ss_pred cccccCccccccCcccCCCCccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcC
Q 013113 83 YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYG 162 (449)
Q Consensus 83 ~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp 162 (449)
. ....+..+..|+|.+ ...|++..++-.+.|++.++.+|-+ +|++|||||||+|.++.+++.+++.
T Consensus 44 ~----~~~~i~~gglGAGgd-----pe~g~e~a~e~~~eI~~~l~~aD~V---FVtaGLGGGTGTGaAPVvAeiake~-- 109 (315)
T 3r4v_A 44 S----VNVTLTKGTRGAGGN-----RKVILPLVRPQIPALMDTIPEADFY---IVCYSLGGGSGSVLGPLITGQLADR-- 109 (315)
T ss_dssp G----SEEEECTTCCC---C-----HHHHHHHHGGGHHHHHHTSCCBSCE---EEEEESSSSSHHHHHHHHHHHHHHT--
T ss_pred h----cceeeecccCCCCCC-----hHHHHHHHHhhHHHHHHhcCCCCEE---EEEeccCCccccchHHHHHHHHHHc--
Confidence 1 111123444577766 4567777777777888888887755 9999999999999999999999998
Q ss_pred CcceeeEEEecCCCCCcc-cchhhHHHHHHHHhhhcCCeeEEecChhhHhhhccCCCCCCCCcchhhHHHHHHHhcccc
Q 013113 163 KKSKLGFTIYPSPQVSTA-VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240 (449)
Q Consensus 163 ~~~i~~~~v~P~~~~~~~-~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 240 (449)
...++++++.|.. +.. .....||+-+|..|.+.+|.+|+|+ +... .+...++.+|+.++..|..+..
T Consensus 110 GalvVavVt~~~E--~~~~~~Nai~al~~LE~La~~~dt~Iv~d---~Len------~~~lp~~~lN~eia~rL~al~~ 177 (315)
T 3r4v_A 110 KASFVSFVVGAME--STDNLGNDIDTMKTLEAIAVNKHLPIVVN---YVPN------TQGRSYESINDEIAEKIRKVVL 177 (315)
T ss_dssp TCCEEEEEEECCS--SHHHHHHHHHHHHHHHHHHHHHTSCEEEE---EEEC------CTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCC--cchhhhchHHHHHHHHHHHhccCCcEEEe---cccc------CCCCchHHHHHHHHHHHHHHHH
Confidence 3367777887732 222 1222447888999999999999998 2222 2345679999999998877644
No 18
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=96.99 E-value=0.00057 Score=44.32 Aligned_cols=27 Identities=78% Similarity=1.183 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhccCCCCC
Q 013113 416 GEFSEAREDLAALEKDYEEVGAEGVDD 442 (449)
Q Consensus 416 ~eF~Ea~~~l~~li~~Y~~~~~~~~~~ 442 (449)
++|.||+++|.+|+.+|+++..+..++
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~e~ 27 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSVEG 27 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhcccccc
Confidence 589999999999999999997665443
No 19
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=65.89 E-value=8.6 Score=31.94 Aligned_cols=31 Identities=13% Similarity=0.243 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhhhhcCCCCCeeEEeeCCCCc
Q 013113 115 VDLCLDRVRKLSDNCTGLQGFLVFNAVGGGT 145 (449)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGt 145 (449)
.+.+.++++..+++.|.-+|++++.++-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGS 71 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGS 71 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCC
Confidence 3467788888899988888999999999886
No 20
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=65.29 E-value=4.2 Score=34.25 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=26.0
Q ss_pred HHHHHHHHHhhhhhcCCCCCeeEEeeCCCCc
Q 013113 115 VDLCLDRVRKLSDNCTGLQGFLVFNAVGGGT 145 (449)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGt 145 (449)
.+.+.++++..+++.|. +|++|+.++-|||
T Consensus 45 ~~~~~~~i~~~i~~~~~-~gvliLtDl~GGS 74 (142)
T 3bed_A 45 LSGTQAKLAAILKEAGN-VPTLVLADLXGGT 74 (142)
T ss_dssp HHHHHHHHHHHHHHHCS-CCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECCCCH
Confidence 35677888889999998 9999999999886
No 21
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=63.13 E-value=4.9 Score=37.56 Aligned_cols=70 Identities=19% Similarity=0.186 Sum_probs=46.0
Q ss_pred cccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCcceeeEEEecCCCCC
Q 013113 104 ARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS 178 (449)
Q Consensus 104 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~~~~v~P~~~~~ 178 (449)
.+|++..-..+.+.+.+.|++.+++.....=++.-||||| +++..+.-.|+..+|...+.. ..+-.+..+
T Consensus 96 H~GF~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~v~~-~tFg~PrvG 165 (258)
T 3g7n_A 96 MRGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGG----ALTSIAHVALAQNFPDKSLVS-NALNAFPIG 165 (258)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHH----HHHHHHHHHHHHHCTTSCEEE-EEESCCCCB
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHH----HHHHHHHHHHHHhCCCCceeE-EEecCCCCC
Confidence 3455544456677788888888887665554566699976 478888888888888765433 334333333
No 22
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=57.82 E-value=7.3 Score=36.78 Aligned_cols=59 Identities=12% Similarity=0.155 Sum_probs=39.9
Q ss_pred cccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCcce
Q 013113 104 ARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166 (449)
Q Consensus 104 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i 166 (449)
.+|++..-....+.+.+.|++.+++.....=++.-||||| +++..+.-.|+..+|...+
T Consensus 110 H~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGG----alA~l~a~~l~~~~~~~~~ 168 (279)
T 3uue_A 110 MHGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGA----AMGLLCAMDIELRMDGGLY 168 (279)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHH----HHHHHHHHHHHHHSTTCCS
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHH----HHHHHHHHHHHHhCCCCce
Confidence 4455544456667777888888777655554556699976 4777777778877775533
No 23
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=55.41 E-value=7.7 Score=32.80 Aligned_cols=39 Identities=10% Similarity=0.194 Sum_probs=28.9
Q ss_pred HHHHHHHHHhhhhhc-CCCCCeeEEeeCCCCccccchhHH
Q 013113 115 VDLCLDRVRKLSDNC-TGLQGFLVFNAVGGGTGSGLGSLL 153 (449)
Q Consensus 115 ~~~~~d~ir~~~E~c-D~lqgf~~~~sl~GGtGSG~~~~l 153 (449)
.+.+.++++..+++. |.-+|++|+.++-|||=.-.+..+
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l 82 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSM 82 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHH
Confidence 356777788888888 778899999999998743444333
No 24
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=55.36 E-value=47 Score=28.99 Aligned_cols=92 Identities=12% Similarity=0.039 Sum_probs=50.3
Q ss_pred eEEeeCCCCccccchhHHHHHhhhhcCCcceeeEEEecCCCCCcccchhhHHHHHHHHhhhcCCeeEEecChhhHhhhcc
Q 013113 136 LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215 (449)
Q Consensus 136 ~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~~N~~l~~~~~~ 215 (449)
-++.+.+.|+- -++..++-.|+.+||...+ .+|+|+....+.- .+-|. ..+..+.+.||.+..+.......
T Consensus 46 ~~isgga~G~D-~~aae~vl~lk~~y~~i~L--~~v~Pf~~~~~~w-~~~~~-~~y~~ll~~aD~v~~l~~~~y~~---- 116 (181)
T 2nx2_A 46 WILISGQLGVE-LWAAEAAYDLQEEYPDLKV--AVITPFYEQEKNW-KEPNK-EQYEAVLAQADYEASLTHRPYES---- 116 (181)
T ss_dssp EEEECCCTTHH-HHHHHHHHTTTTTCTTCEE--EEEESSBCTTTTS-CHHHH-HHHHHHHHHCSEEEESSSSBCCC----
T ss_pred EEEECCCccHH-HHHHHHHHHhccccCCceE--EEEecccchhhCC-CHHHH-HHHHHHHHhCCeEEecccCCCCC----
Confidence 44444444432 3455556667788985444 5678876543322 22232 45777778888888775432100
Q ss_pred CCCCCCCCcchhhHHHHHHHhccccc
Q 013113 216 SLDIERPTYTNLNRLISQIISSLTTS 241 (449)
Q Consensus 216 ~~~~~~~~~~~~N~~ia~~i~~~t~~ 241 (449)
...|..-|+.+...-..+.+-
T Consensus 117 -----~~~~~~rn~~mvd~sD~liav 137 (181)
T 2nx2_A 117 -----PLQFKQKNQFFIDKSDGLLLL 137 (181)
T ss_dssp -----HHHHHHHHHHHHHHSSEEEEE
T ss_pred -----HHHHHHHHHHHHHHCCEEEEE
Confidence 012456677666655554443
No 25
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=50.37 E-value=19 Score=29.75 Aligned_cols=40 Identities=18% Similarity=0.409 Sum_probs=30.5
Q ss_pred hHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHH
Q 013113 114 IVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155 (449)
Q Consensus 114 ~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e 155 (449)
-.+++.++++..+++.|.-+|++++.++ ||=+-++..+.+
T Consensus 43 ~~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~~ 82 (130)
T 3gx1_A 43 EVKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILTE 82 (130)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 3467888999999999999999999999 554444444443
No 26
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=48.58 E-value=8.8 Score=33.08 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=26.8
Q ss_pred HHHHHHHHhhhhhcCCCCCeeEEeeCCCCcc
Q 013113 116 DLCLDRVRKLSDNCTGLQGFLVFNAVGGGTG 146 (449)
Q Consensus 116 ~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtG 146 (449)
+.+.++++..+++.|.-+|++|+.++-|||=
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGSP 91 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGSV 91 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCH
Confidence 4577888888999888899999999999874
No 27
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=46.70 E-value=14 Score=31.34 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=29.7
Q ss_pred HHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHH
Q 013113 115 VDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLL 154 (449)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~ 154 (449)
.+.+.++++..+++.|.-+|++|+.++-|||=.=.+..++
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~~ 80 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVI 80 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHH
Confidence 3567778888888888888999999999987433344443
No 28
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=43.13 E-value=9.8 Score=36.31 Aligned_cols=59 Identities=12% Similarity=0.069 Sum_probs=37.5
Q ss_pred ccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCccee
Q 013113 105 RGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167 (449)
Q Consensus 105 ~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~ 167 (449)
+|++..-+...+.+.+.|++.+++.....=++.-||||| +++..++-.|+...++..++
T Consensus 127 ~GF~~~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~~~ 185 (301)
T 3o0d_A 127 NGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGG----AAALLFGINLKVNGHDPLVV 185 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHH----HHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeccChHH----HHHHHHHHHHHhcCCCceEE
Confidence 354444455666777778888777654444455689976 47777777777765444333
No 29
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae}
Probab=40.23 E-value=12 Score=36.06 Aligned_cols=56 Identities=18% Similarity=0.157 Sum_probs=36.7
Q ss_pred cccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCC
Q 013113 104 ARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163 (449)
Q Consensus 104 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~ 163 (449)
..|++..-..+.+.+.+.|++.+++.....=++.-||||| +++..+.-.|+...+.
T Consensus 108 H~GF~~a~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGG----AlA~L~a~~l~~~~~~ 163 (319)
T 3ngm_A 108 HSGFQNAWNEISAAATAAVAKARKANPSFKVVSVGHSLGG----AVATLAGANLRIGGTP 163 (319)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHH----HHHHHHHHHHHHTTCC
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEeecCHHH----HHHHHHHHHHHhcCCC
Confidence 4455554456667777788887776655555566699977 4677776667665433
No 30
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=39.93 E-value=7.2 Score=32.55 Aligned_cols=28 Identities=14% Similarity=0.249 Sum_probs=21.8
Q ss_pred HHHHHHHhhhhhcCCCCCeeEEeeCCCCc
Q 013113 117 LCLDRVRKLSDNCTGLQGFLVFNAVGGGT 145 (449)
Q Consensus 117 ~~~d~ir~~~E~cD~lqgf~~~~sl~GGt 145 (449)
...++|+..+++.|.=+|++++.++ |||
T Consensus 49 ~~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 49 SDPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp CCHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 3446677778888877899999999 654
No 31
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=39.86 E-value=16 Score=34.27 Aligned_cols=53 Identities=13% Similarity=0.193 Sum_probs=36.1
Q ss_pred cccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhh
Q 013113 104 ARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160 (449)
Q Consensus 104 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~de 160 (449)
.+|++..-+.+.+.+.+.|++..++.....=++.-|||||+ ++..++-.++..
T Consensus 109 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~ 161 (279)
T 1tia_A 109 ELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAA----VATLAATDLRGK 161 (279)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHH----HHHHHHHHHHhc
Confidence 45665555566677777888877776655556777999874 666666666654
No 32
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=39.65 E-value=11 Score=35.09 Aligned_cols=52 Identities=15% Similarity=0.155 Sum_probs=34.6
Q ss_pred cccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhh
Q 013113 104 ARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 159 (449)
Q Consensus 104 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~d 159 (449)
.+|++..-..+.+.+.+.|++..++.....=++.-||||| +++..+.-.|+.
T Consensus 97 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~ 148 (261)
T 1uwc_A 97 HGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGA----SMAALTAAQLSA 148 (261)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHH----HHHHHHHHHHHT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHCCCceEEEEecCHHH----HHHHHHHHHHhc
Confidence 3455444445667777788888777655555666799977 467777666764
No 33
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=38.29 E-value=11 Score=31.30 Aligned_cols=27 Identities=22% Similarity=0.378 Sum_probs=20.3
Q ss_pred HHHHHHHhhhhhcCCCCCeeEEeeCCCCc
Q 013113 117 LCLDRVRKLSDNCTGLQGFLVFNAVGGGT 145 (449)
Q Consensus 117 ~~~d~ir~~~E~cD~lqgf~~~~sl~GGt 145 (449)
...++|+..++++| =+|++++.++ |||
T Consensus 44 ~~~~~i~~ai~~~~-~dgVlvltDL-Ggs 70 (131)
T 3ct6_A 44 TSFDRVMNAIEENE-ADNLLTFFDL-GSA 70 (131)
T ss_dssp CCHHHHHHHHHHSS-CSEEEEEESS-GGG
T ss_pred HHHHHHHHHHHhCC-CCCEEEEEeC-CCC
Confidence 34567777777777 4899999999 654
No 34
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=37.59 E-value=13 Score=35.11 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHh
Q 013113 115 VDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157 (449)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l 157 (449)
.+++++++|+.+++=..+ +|+|.|+|++++..|.=
T Consensus 13 r~~il~~l~~~i~~~~~i--------ig~gaGtGlsAk~~e~g 47 (286)
T 2p10_A 13 RSELVDRFQKKIRAGEPI--------IGGGAGTGLSAKSEEAG 47 (286)
T ss_dssp HHHHHHHHHHHHHTTCCE--------EEEEESSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCce--------EEEecccchhhHHHHhC
Confidence 467899999999986666 67888999999888653
No 35
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=36.27 E-value=34 Score=28.52 Aligned_cols=40 Identities=20% Similarity=0.342 Sum_probs=29.0
Q ss_pred hHHHHHHHHHhhhhh--cCCCCCeeEEeeCCCCccccchhHHHH
Q 013113 114 IVDLCLDRVRKLSDN--CTGLQGFLVFNAVGGGTGSGLGSLLLE 155 (449)
Q Consensus 114 ~~~~~~d~ir~~~E~--cD~lqgf~~~~sl~GGtGSG~~~~l~e 155 (449)
-.+++.++++..+++ .|.-+|++++.++ ||=+-++..+.+
T Consensus 43 ~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l~~ 84 (139)
T 3gdw_A 43 EVQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLFE 84 (139)
T ss_dssp CHHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 346778888888888 7788999999999 544444444443
No 36
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=36.03 E-value=28 Score=27.08 Aligned_cols=52 Identities=29% Similarity=0.581 Sum_probs=38.3
Q ss_pred eecChhhHHHHHHHH-------HHHHHHhhccccccccccCCCCh--hhHHHHHHHHHHHHHHHHH
Q 013113 378 ISNNTAVAEVFSRID-------HKFDLMYAKRAFVHWYVGEGMEE--GEFSEAREDLAALEKDYEE 434 (449)
Q Consensus 378 l~N~t~i~~~l~~l~-------~~~~~~~~rkAflH~Y~~~Gmee--~eF~Ea~~~l~~li~~Y~~ 434 (449)
++|.++|...|..|. +.-..+-.+|.|. ||+.+ ....||+..|+.|.+++++
T Consensus 30 i~nDssVQsLF~~lt~MH~~Ll~~i~~~ee~R~~y-----E~LQDkL~qi~eAR~ALdaLR~eH~~ 90 (98)
T 3f1i_H 30 ITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYY-----EGLQDKLAQIRDARGALSALREEHRE 90 (98)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678888888887654 4455555556433 57744 5799999999999999974
No 37
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=34.39 E-value=14 Score=34.39 Aligned_cols=53 Identities=13% Similarity=0.181 Sum_probs=35.4
Q ss_pred cccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhh
Q 013113 104 ARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160 (449)
Q Consensus 104 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~de 160 (449)
.+|++..-+.+.+.+.+.+++..++.....=+++-||||| +++..++..++..
T Consensus 110 h~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGG----alA~l~a~~l~~~ 162 (269)
T 1tib_A 110 HDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGG----ALATVAGADLRGN 162 (269)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHH----HHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCChHH----HHHHHHHHHHHhc
Confidence 4455544455667777777777776655555677799976 4777777777654
No 38
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=28.39 E-value=1.1e+02 Score=29.50 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=54.7
Q ss_pred cchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCcceeeEEEecCCCCC-cccchhhHHH
Q 013113 110 VGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS-TAVVEPYNSV 188 (449)
Q Consensus 110 ~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~~~~v~P~~~~~-~~~~~~yN~~ 188 (449)
...+.+.++.+.|+..+++ +..+||+|+|+..- =-.++..++.+-+ .++-.+++=+..|....+ +....-++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTDT---meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (332)
T 2wlt_A 65 MNEEIWFKLAQRAQELLDD-SRIQGVVITHGTDT---LEESAYFLNLVLH-STKPVVLVGAMRNASSLSADGALNLYEAV 139 (332)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCSSS---HHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCchh---HHHHHHHHHHHhC-CCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 3456666777777777654 46889999997653 3456777776544 444445555566765433 4444444554
Q ss_pred HHHHHhhhcCCeeEEecChhhHh
Q 013113 189 LSTHSLLEHTDVAVLLDNEAIYD 211 (449)
Q Consensus 189 lsl~~l~e~~d~~i~~~N~~l~~ 211 (449)
..-..-...--.|.++=|+.++.
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~ 162 (332)
T 2wlt_A 140 SVAVNEKSANKGVLVVMDDTIFS 162 (332)
T ss_dssp HHHHCGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEee
Confidence 32221110112566666666654
No 39
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=27.67 E-value=1e+02 Score=29.52 Aligned_cols=97 Identities=12% Similarity=0.112 Sum_probs=54.9
Q ss_pred cchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCcceeeEEEecCCCCC-cccchhhHHH
Q 013113 110 VGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS-TAVVEPYNSV 188 (449)
Q Consensus 110 ~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~~~~v~P~~~~~-~~~~~~yN~~ 188 (449)
...+.+.++.+.|+..+++ +..+||+|+|+..- --.++..++.+-+ .++-.+++=+..|....+ +....-++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTDT---meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (327)
T 1o7j_A 65 MTGDVVLKLSQRVNELLAR-DDVDGVVITHGTDT---VEESAYFLHLTVK-SDKPVVFVAAMRPATAISADGPMNLLEAV 139 (327)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCSTT---HHHHHHHHHHHCC-CCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCchh---HHHHHHHHHHHhC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 3456667777777777654 46889999997653 3456777776544 444445555566765433 4444444444
Q ss_pred HHHHHhhhcCCeeEEecChhhHh
Q 013113 189 LSTHSLLEHTDVAVLLDNEAIYD 211 (449)
Q Consensus 189 lsl~~l~e~~d~~i~~~N~~l~~ 211 (449)
..-..-...--.|.++=|+.++.
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~ 162 (327)
T 1o7j_A 140 RVAGDKQSRGRGVMVVINDRIGS 162 (327)
T ss_dssp HHHHCGGGTTSCCEEEETTEEEE
T ss_pred HHHhCcCCCCCceEEEECCEEee
Confidence 32221111112566666666654
No 40
>2ful_A EIF-5, eukaryotic translation initiation factor 5; atypical heat motif; 1.50A {Saccharomyces cerevisiae}
Probab=27.39 E-value=41 Score=29.35 Aligned_cols=53 Identities=6% Similarity=0.056 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHHH--HhhccccccccccCC---CChhhHHHHHHHHHHHHHHHHHhc
Q 013113 384 VAEVFSRIDHKFDL--MYAKRAFVHWYVGEG---MEEGEFSEAREDLAALEKDYEEVG 436 (449)
Q Consensus 384 i~~~l~~l~~~~~~--~~~rkAflH~Y~~~G---mee~eF~Ea~~~l~~li~~Y~~~~ 436 (449)
....|-.++..+.. +..-.|++.||.+.. .+......++..+..++.==++.+
T Consensus 104 ~~~~~~~IL~~LYd~DIleEeaIl~W~~~~skk~v~~e~~~~v~~~~~pFI~WL~eAE 161 (177)
T 2ful_A 104 LIPLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFITWLETAE 161 (177)
T ss_dssp GGGGHHHHHHHHHHTTSSCHHHHHHHHHCCCSSSSCHHHHHHHHHTTHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhccchhhhHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHccc
Confidence 33445555555533 667889999997642 455556667777777777666654
No 41
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=26.43 E-value=97 Score=28.45 Aligned_cols=57 Identities=14% Similarity=0.251 Sum_probs=33.7
Q ss_pred HHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCcceeeEEEecC
Q 013113 117 LCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPS 174 (449)
Q Consensus 117 ~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~~~~v~P~ 174 (449)
-+.+.+...++.......=.-+-++|.||| .++..++..+...+|...+...+|=|+
T Consensus 35 ~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG-~~~~~~l~~l~~~~~~~~v~~~~vD~S 91 (292)
T 2aot_A 35 FMDKKLPGIIGRIGDTKSEIKILSIGGGAG-EIDLQILSKVQAQYPGVCINNEVVEPS 91 (292)
T ss_dssp HHHHTHHHHSSSTTTTCSEEEEEEETCTTS-HHHHHHHHHHHHHSTTCEEEEEEECSC
T ss_pred HHHHhchhHHhhccCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhCCCceeeEEEEeCC
Confidence 333445555554432222245778888887 466678888877777654334666665
No 42
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=26.30 E-value=1.1e+02 Score=29.30 Aligned_cols=97 Identities=14% Similarity=0.109 Sum_probs=54.4
Q ss_pred cchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCcceeeEEEecCCCCC-cccchhhHHH
Q 013113 110 VGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS-TAVVEPYNSV 188 (449)
Q Consensus 110 ~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~~~~v~P~~~~~-~~~~~~yN~~ 188 (449)
...+.+.++.+.|+..+++ +..+||+|+|+..- =-.++..++.+-+ .++-.+++=+..|....+ +....-++++
T Consensus 63 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTDT---meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 137 (330)
T 1wsa_A 63 MTGKVWLKLAKRVNELLAQ-KETEAVIITHGTDT---MEETAFFLNLTVK-SQKPVVLVGAMRPGSSMSADGPMNLYNAV 137 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHS-TTCCCEEEECCSSS---HHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEEcCcch---HHHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 3456667777778777654 56889999997653 3456777776544 444445555566765433 3333344444
Q ss_pred HHHHHhhhcCCeeEEecChhhHh
Q 013113 189 LSTHSLLEHTDVAVLLDNEAIYD 211 (449)
Q Consensus 189 lsl~~l~e~~d~~i~~~N~~l~~ 211 (449)
..-..-...--.|.++=|+.++.
T Consensus 138 ~~A~~~~~~~~GV~V~fn~~i~~ 160 (330)
T 1wsa_A 138 NVAINKASTNKGVVIVMNDEIHA 160 (330)
T ss_dssp HHHTCGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEee
Confidence 32211110112566666666654
No 43
>3a1g_A RNA-directed RNA polymerase catalytic subunit; influenza virus, RNA polymerase, nucleotide-binding, nucleotidyltransferase, nucleus, RNA replication; 1.70A {Influenza a virus} PDB: 2ztt_A
Probab=24.41 E-value=1.4e+02 Score=22.00 Aligned_cols=44 Identities=16% Similarity=0.263 Sum_probs=32.9
Q ss_pred eecChhhHHHHHHHHHHHHHHhhccccccccccCCCChhhHHHHHHHHHHHHH
Q 013113 378 ISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430 (449)
Q Consensus 378 l~N~t~i~~~l~~l~~~~~~~~~rkAflH~Y~~~Gmee~eF~Ea~~~l~~li~ 430 (449)
++|++-...+-.++..+++.-|--+ -|+.+||+|+...+.++..
T Consensus 32 iG~~Sm~EAm~~rlr~dAr~d~esG---------ri~k~efeeim~i~~~i~~ 75 (80)
T 3a1g_A 32 VGISSMVEAMVSRARIDARIDFESG---------RIKKEEFTEIMKICSTIEE 75 (80)
T ss_dssp CTTSBHHHHHHHHHHHHHHHHHHHT---------SSCHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhhhhhhc---------cccHHHHHHHHHHHHHHHH
Confidence 5677777777777777776655433 5899999999999888754
No 44
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=24.25 E-value=29 Score=24.14 Aligned_cols=23 Identities=26% Similarity=0.446 Sum_probs=17.3
Q ss_pred hhccccccccccCCCChhhHHHHHHH
Q 013113 399 YAKRAFVHWYVGEGMEEGEFSEARED 424 (449)
Q Consensus 399 ~~rkAflH~Y~~~Gmee~eF~Ea~~~ 424 (449)
-+|.+|| .+-|+.++|+.+|+..
T Consensus 31 ~~K~~FL---~sKGLt~~EI~~Al~r 53 (54)
T 3ff5_A 31 ATRRAFL---KKKGLTDEEIDLAFQQ 53 (54)
T ss_dssp HHHHHHH---HHTTCCHHHHHHHHHH
T ss_pred HHHHHHH---HHcCCCHHHHHHHHHc
Confidence 4566666 3459999999999864
No 45
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=23.32 E-value=1.4e+02 Score=28.80 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=51.6
Q ss_pred chhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCcceeeEEEecCCCCC-cccchhhHHHH
Q 013113 111 GKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS-TAVVEPYNSVL 189 (449)
Q Consensus 111 g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~~~~v~P~~~~~-~~~~~~yN~~l 189 (449)
..+.+..+.+.|++.++ +..+||+|+|+..- --.++.+++.+- ..++-.+++=+..|....+ +....-++++.
T Consensus 70 ~~~~~~~la~~i~~~~~--~~~dGvVItHGTDT---m~~TA~~L~~~l-~~~kPVVlTGa~rp~~~~~sDg~~NL~~Av~ 143 (334)
T 3nxk_A 70 CDEIWLRLAKKIAKLFA--EGIDGVVITHGTDT---MEETAYFLNLTI-KSDKPVVLVGAMRPSTAISADGPKNLYNAVA 143 (334)
T ss_dssp CHHHHHHHHHHHHHHHH--TTCCEEEEECCSTT---HHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhh--cCCCeEEEECCCch---HHHHHHHHHHHc-CCCCCEEEECCCCCCCCCCchHHHHHHHHHH
Confidence 34555666666766654 67899999996643 234566666544 3444455555677765433 33333334433
Q ss_pred HHHHhhhcCCeeEEecChhhHh
Q 013113 190 STHSLLEHTDVAVLLDNEAIYD 211 (449)
Q Consensus 190 sl~~l~e~~d~~i~~~N~~l~~ 211 (449)
....-.-..-.|.++-|+.++.
T Consensus 144 ~A~~~~a~~~GV~v~f~~~i~~ 165 (334)
T 3nxk_A 144 LVVNKEAKNKGVMVAINDKILS 165 (334)
T ss_dssp HHHSGGGTTSCSEEEETTEEEE
T ss_pred HHhCcccCCCeEEEEECCEEEe
Confidence 3222111123566666666654
No 46
>1k2d_P MBP peptide, myelin basic protein peptide with 8 residue linke; MHC class II, I-AU, H-2U, autoimmune disease; HET: NDG NAG; 2.20A {Mus musculus}
Probab=23.25 E-value=20 Score=20.21 Aligned_cols=8 Identities=88% Similarity=1.298 Sum_probs=4.7
Q ss_pred Cccccchh
Q 013113 144 GTGSGLGS 151 (449)
Q Consensus 144 GtGSG~~~ 151 (449)
|||||.|+
T Consensus 16 g~gsgsgs 23 (26)
T 1k2d_P 16 GTGSGSGS 23 (26)
T ss_pred cCCCCcCc
Confidence 56666554
No 47
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=22.58 E-value=1.6e+02 Score=28.57 Aligned_cols=94 Identities=13% Similarity=0.195 Sum_probs=55.7
Q ss_pred cchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCcceeeEEEecCCCCC-cccchhhHHH
Q 013113 110 VGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS-TAVVEPYNSV 188 (449)
Q Consensus 110 ~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~~~~v~P~~~~~-~~~~~~yN~~ 188 (449)
...+.+.++.+.|+..++ ..+||+|+|+..- =-.++..++.+-+..++-.+++=+..|....+ +....-++++
T Consensus 83 mt~~~w~~la~~I~~~~~---~~dG~VItHGTDT---meeTA~~Ls~~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 156 (358)
T 2him_A 83 MTPEDWQHIAEDIKAHYD---DYDGFVILHGTDT---MAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNAL 156 (358)
T ss_dssp CCHHHHHHHHHHHHHHGG---GCSEEEEECCSTT---HHHHHHHHHHHEETCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh---cCCeEEEecCchH---HHHHHHHHHHHHhcCCCCEEEeCCCCCCcCCCcchHHHHHHHH
Confidence 345666677777777665 3789999997653 34577777766544455556666677876533 4444444444
Q ss_pred HHHHHhhhcCCeeEEecChhhHh
Q 013113 189 LSTHSLLEHTDVAVLLDNEAIYD 211 (449)
Q Consensus 189 lsl~~l~e~~d~~i~~~N~~l~~ 211 (449)
..-.. .+ +..|.++=|+.+..
T Consensus 157 ~~A~~-~~-~~GV~V~fn~~i~~ 177 (358)
T 2him_A 157 YVAAN-YP-INEVTLFFNNRLYR 177 (358)
T ss_dssp HHHHH-SC-CSSEEEEETTEEEE
T ss_pred HHHhC-CC-CCCeEEEECCEEee
Confidence 32222 22 24566666776664
No 48
>1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A
Probab=22.06 E-value=69 Score=29.49 Aligned_cols=51 Identities=14% Similarity=0.100 Sum_probs=32.1
Q ss_pred ccccccccchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHh
Q 013113 103 FARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 157 (449)
Q Consensus 103 wa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l 157 (449)
...|++..-..+.+.+.+.|++.+++.....=+++-|||||+ ++..++-.+
T Consensus 107 vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGga----lA~l~a~~l 157 (269)
T 1tgl_A 107 VHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGA----TALLCALDL 157 (269)
T ss_pred EcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHH----HHHHHHHHH
Confidence 344555444566677777777777664444445667999774 666666666
No 49
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=21.62 E-value=1.1e+02 Score=29.43 Aligned_cols=93 Identities=10% Similarity=-0.014 Sum_probs=54.9
Q ss_pred cchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCcceeeEEEecCCCCC-cccchhhHHH
Q 013113 110 VGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS-TAVVEPYNSV 188 (449)
Q Consensus 110 ~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~~~~v~P~~~~~-~~~~~~yN~~ 188 (449)
...+.+.++.+.|+..++ ..+||+|+|+.. | =-.++..++.+-...++-.+++=+..|....+ +....-++++
T Consensus 55 mt~~~w~~la~~I~~~~~---~~dG~VItHGTD--T-meeTA~~Ls~ll~~~~kPVVlTGAqrP~~~~~sDg~~NL~~Av 128 (328)
T 1wls_A 55 IQPSDWERLAKEIEKEVW---EYDGIVITHGTD--T-MAYSASMLSFMLRNPPIPIVLTGSMLPITEKNSDAPFNLRTAL 128 (328)
T ss_dssp CCHHHHHHHHHHHHHHTT---TCSEEEEECCGG--G-HHHHHHHHHHHEESCSSEEEEECCSSCTTSSSCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhc---cCCeEEEEcCCc--h-HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCCCchHHHHHHHH
Confidence 345666777777777664 478999999664 2 35677777754334445455566667766433 3333344444
Q ss_pred HHHHHhhhcCCeeEEecChhhHh
Q 013113 189 LSTHSLLEHTDVAVLLDNEAIYD 211 (449)
Q Consensus 189 lsl~~l~e~~d~~i~~~N~~l~~ 211 (449)
. +..- ..+ .|.++=|+.++.
T Consensus 129 ~-~A~~-~~~-GV~V~fn~~i~~ 148 (328)
T 1wls_A 129 E-FVKL-GIR-GIYIAFNGKVML 148 (328)
T ss_dssp H-HHTT-TCC-EEEEEETTEEEE
T ss_pred H-HHhC-CCC-CeEEEECCEEee
Confidence 3 2221 223 677777777764
No 50
>3kl4_B DPAP B, YSCV, signal peptide of yeast dipeptidyl aminopeptidase; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Saccharomyces cerevisiae}
Probab=20.18 E-value=19 Score=22.54 Aligned_cols=11 Identities=64% Similarity=1.057 Sum_probs=6.7
Q ss_pred CccccchhHHH
Q 013113 144 GTGSGLGSLLL 154 (449)
Q Consensus 144 GtGSG~~~~l~ 154 (449)
|.|||.|+.++
T Consensus 4 gsgsgsgskli 14 (42)
T 3kl4_B 4 GSGSGSGSKLI 14 (42)
T ss_pred CCCCCCccceE
Confidence 55667666553
No 51
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=20.09 E-value=1.7e+02 Score=27.89 Aligned_cols=95 Identities=14% Similarity=0.205 Sum_probs=53.8
Q ss_pred cchhhHHHHHHHHHhhhhhcCCCCCeeEEeeCCCCccccchhHHHHHhhhhcCCcceeeEEEecCCCCC-cccchhhHHH
Q 013113 110 VGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS-TAVVEPYNSV 188 (449)
Q Consensus 110 ~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~~~~l~e~l~deyp~~~i~~~~v~P~~~~~-~~~~~~yN~~ 188 (449)
...+.+.++.+.|+..+++. +||+|+|+..- =-.++..++.+- ..++-.+++=+..|....+ +....-++++
T Consensus 61 mt~~~w~~la~~I~~~~~~~---dG~VItHGTDT---meeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 133 (326)
T 1nns_A 61 MNDNVWLTLAKKINTDCDKT---DGFVITHGTDT---MEETAYFLDLTV-KCDKPVVMVGAMRPSTSMSADGPFNLYNAV 133 (326)
T ss_dssp CCHHHHHHHHHHHHHHGGGC---SEEEEECCSSS---HHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhcC---CcEEEEcCchh---HHHHHHHHHHhc-CCCCCEEEeCCCCCCcCCCCchHHHHHHHH
Confidence 34566777778887776653 89999997653 345667777654 3444445555666766433 4444444444
Q ss_pred HHHHHhhhcCCeeEEecChhhHh
Q 013113 189 LSTHSLLEHTDVAVLLDNEAIYD 211 (449)
Q Consensus 189 lsl~~l~e~~d~~i~~~N~~l~~ 211 (449)
..-..-...--.|.++=|+.++.
T Consensus 134 ~~A~~~~~~~~GV~v~fn~~i~~ 156 (326)
T 1nns_A 134 VTAADKASANRGVLVVMNDTVLD 156 (326)
T ss_dssp HHHHCGGGTTSCSEEEETTEEEE
T ss_pred HHHcCcccCCCceEEEECCEEee
Confidence 32221111112455655666654
No 52
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=20.05 E-value=39 Score=24.80 Aligned_cols=25 Identities=24% Similarity=0.430 Sum_probs=18.9
Q ss_pred HhhccccccccccCCCChhhHHHHHHHH
Q 013113 398 MYAKRAFVHWYVGEGMEEGEFSEAREDL 425 (449)
Q Consensus 398 ~~~rkAflH~Y~~~Gmee~eF~Ea~~~l 425 (449)
+-+|.+|| .+-|+.++|+++|+...
T Consensus 35 ~~~K~~FL---~sKGLt~eEI~~Al~ra 59 (70)
T 2w84_A 35 LATRRAFL---KKKGLTDEEIDMAFQQS 59 (70)
T ss_dssp HHHHHHHH---HHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHH---HHcCCCHHHHHHHHHHc
Confidence 34566777 44599999999998764
Done!