Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>013114
MMSVSVVSSQVPLTSFHHLKGRRKSRSRRPRAMPISASDAGTDENDKSTTLITFLGKGGS
GKTTSAVFAAQHYAMAGLSTCLVLHSQDPTAEYILNCKIGNSPVVCNSNLSAVRIETTKM
FLEPLNWLKQADARLNMTQGVLGGVVGEELGVLPGMDSIFSAFALERLVGFFGNFAQRNH
QKEKFDVIVYDGISPEETLRMIGVSSKARLYLKYLRNVAEKTDLGRLTAPSLLKLVDEAL
SISGRRPLLNGNTSAEIWDAMDRMLERGSSALAEPHKFGCFLVMNPNNRTSVNSALRYWG
CTIQAGAQVAGAICTASPHLDEESAERVRKNFSPLPLSFLPHLPTDSSLDWNTIMLNPAG
KEARDLLSLQAKRSSSLMSSVKFDAAKKSVTLLMPGFDKSEIKLYQYRGGSELLVEAGDQ
RRVIHLPPQIQGKVGGARFIERNLIVTMG

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013114
        (449 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2028820 - symbol:AT1G26090 species:3702 "Arabi...  1239  3.7e-126  1


>TAIR|locus:2028820 [details] [associations]
            symbol:AT1G26090 species:3702 "Arabidopsis thaliana"
            [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009507 "chloroplast"
            evidence=IDA] InterPro:IPR016300 Pfam:PF02374 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
            EMBL:AC079829 EMBL:AC084221 UniGene:At.44967 UniGene:At.70413
            GO:GO:0010287 eggNOG:COG0003 GO:GO:0071722 InterPro:IPR025723
            PANTHER:PTHR10803 EMBL:AY630761 EMBL:DQ056464 IPI:IPI00520332
            PIR:H86386 RefSeq:NP_173934.2 ProteinModelPortal:Q6DYE4 SMR:Q6DYE4
            STRING:Q6DYE4 PaxDb:Q6DYE4 PRIDE:Q6DYE4 DNASU:839150
            EnsemblPlants:AT1G26090.1 GeneID:839150 KEGG:ath:AT1G26090
            TAIR:At1g26090 HOGENOM:HOG000239408 InParanoid:Q6DYE4 OMA:YLWGSAQ
            PhylomeDB:Q6DYE4 ProtClustDB:CLSN2680722 Genevestigator:Q6DYE4
            Uniprot:Q6DYE4
        Length = 455

 Score = 1239 (441.2 bits), Expect = 3.7e-126, P = 3.7e-126
 Identities = 241/411 (58%), Positives = 302/411 (73%)

Query:    38 SDAGTDENDKSTTLITFLGKGGSGKTTSAVFAAQHYAMAGLSTCLVLHSQDPTAEYILNC 97
             +D   D + K T  +TFLGKGGSGKTT+AVFAAQHYA+AGLSTCLV+H+QDP+AE++L  
Sbjct:    47 NDTAADSSQKLTKFVTFLGKGGSGKTTAAVFAAQHYALAGLSTCLVIHNQDPSAEFLLGS 106

Query:    98 KIGNSPVVCNSNLSAVRIETTKMFLEPLNWLKQADARLNMTQXXXXXXXXXXXXXXPGMD 157
             KIG SP + N NLS +R+ETTKM LEPL  LKQADARLNMTQ              PGMD
Sbjct:   107 KIGTSPTLINDNLSVIRLETTKMLLEPLKQLKQADARLNMTQGVLEGVVGEELGVLPGMD 166

Query:   158 SIFSAFALERLVGFFGNFAQRNHQKEKFDVIVYDGISPEETLRMIGVSSKARLYLKYLRN 217
             SIFS   LERLVGFF    ++NH+ + FDVI+YDGIS EETLRMIG+SSK RLY KYLR+
Sbjct:   167 SIFSMLELERLVGFFRQATRKNHKGKPFDVIIYDGISTEETLRMIGLSSKTRLYAKYLRS 226

Query:   218 VAEKTDLGRLTAPSLLKLVDEALSISGRRPLLNGNTSAEIWDAMDRMLERGSSALAEPHK 277
             +AEKTDLGRLT+PS+++ VDE+++I+  +   +G TS  +WD ++R LE G+SA  +P +
Sbjct:   227 LAEKTDLGRLTSPSIMRFVDESMNINSNKSPFDGMTSPAMWDTLERFLETGASAWRDPER 286

Query:   278 FGCFLVMNPNNRTSVNSALRYWGCTIQAGAQVAGAICTASPHLDEESAERVRKNXXXXXX 337
             F  FLVM+PNN  SV +ALRYWGCT+QAG+ V+GA   +S HL   +++  + +      
Sbjct:   287 FRSFLVMDPNNPMSVKAALRYWGCTVQAGSHVSGAFAISSSHL---TSQIPKADFVPLPF 343

Query:   338 XXXXXXXTDSSLDWNTIMLNPAGKEARDLLSLQAKRSSSLMSSVKFDAAKKSVTLLMPGF 397
                    T + LDW+ I+L+ A    R+LLS      +SL  +V FD AKK VTL MPGF
Sbjct:   344 ASASVPFTITGLDWDKILLDQANSSIRELLSETVSHGTSLTQTVMFDTAKKLVTLFMPGF 403

Query:   398 DKSEIKLYQYRGGSELLVEAGDQRRVIHLPPQIQGKVGGARFIERNLIVTM 448
             +KSEIKLYQYRGGSELL+EAGDQRRVIHLP QIQGKVGGA+F++R+LIVTM
Sbjct:   404 EKSEIKLYQYRGGSELLIEAGDQRRVIHLPSQIQGKVGGAKFVDRSLIVTM 454


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      449       403   0.00099  117 3  11 22  0.40    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  237 KB (2130 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.85u 0.16s 29.01t   Elapsed:  00:00:01
  Total cpu time:  28.85u 0.16s 29.01t   Elapsed:  00:00:01
  Start:  Thu May  9 19:27:51 2013   End:  Thu May  9 19:27:52 2013

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