BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013125
(449 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 503 bits (1294), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/363 (65%), Positives = 284/363 (78%), Gaps = 28/363 (7%)
Query: 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ 60
ME +G K++LGRKIGSGSFGEI+L +++ TNE VA+K+EN TKHPQLLYE+K+Y+ILQ
Sbjct: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQ 60
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
GG+ GIPN++W+GV+G+ NVLV+DLLGPSLEDLF
Sbjct: 61 GGT--------------------------GIPNVRWFGVEGDYNVLVMDLLGPSLEDLFN 94
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+C RK SLKTVLMLADQMI R+E+VHS+ FLHRDIKPDNFLMGLGR+ANQVYIIDFGLAK
Sbjct: 95 FCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240
KYRD +T++HIPYRENKNLTGTARYAS NTHLGIEQSRRDDLESLGYVL+YFLRGSLPWQ
Sbjct: 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214
Query: 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300
GLKA TKKQKY+KI EKKV+T IE LC+ +P EFASYFHYC+SL FD +PDY +LKRLF
Sbjct: 215 GLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274
Query: 301 DLFSREGYDFDFVFDWTILKYQQTQKTKSQDLLPASRVTNSRVMP--MRTDKLKGVNDAS 358
DLF REG+ FD+VFDWTILKYQQ+Q + S + P ++ D+ GV++
Sbjct: 275 DLFIREGFQFDYVFDWTILKYQQSQIASAPPRAVGHGAGPSGLAPPALQNDRQSGVDEGR 334
Query: 359 CSA 361
S
Sbjct: 335 TSG 337
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/320 (64%), Positives = 257/320 (80%), Gaps = 26/320 (8%)
Query: 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ 60
ME +G KY+LGRKIGSGSFG+I+L +++ + E VA+K+E TKHPQL E+K YK++Q
Sbjct: 3 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 62
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
GG GIP+IKW G +G+ NV+V++LLGPSLEDLF
Sbjct: 63 GGV--------------------------GIPSIKWCGAEGDYNVMVMELLGPSLEDLFN 96
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+C RKFSLKTVL+LADQMI+RIEY+HS+ F+HRD+KPDNFLMGLG+K N VYIIDFGLAK
Sbjct: 97 FCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240
KYRD T++HIPYRENKNLTGTARYAS NTHLGIEQSRRDDLESLGYVL+YF GSLPWQ
Sbjct: 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
Query: 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300
GLKAATK+QKY++I EKK+STPIEVLCK +P+EF++Y ++C+SL FD +PDY +L++LF
Sbjct: 217 GLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFR 276
Query: 301 DLFSREGYDFDFVFDWTILK 320
+LF R+G+ +D+VFDW +LK
Sbjct: 277 NLFHRQGFSYDYVFDWNMLK 296
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/321 (63%), Positives = 256/321 (79%), Gaps = 26/321 (8%)
Query: 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ 60
ME +G +Y+LGRKIGSGSFG+I+L + + E VA+K+E TKHPQL E+K+YK++Q
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
GG GIP I+W G +G+ NV+V++LLGPSLEDLF
Sbjct: 61 GGV--------------------------GIPTIRWCGAEGDYNVMVMELLGPSLEDLFN 94
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+C RKFSLKTVL+LADQMI+RIEY+HS+ F+HRD+KPDNFLMGLG+K N VYIIDFGLAK
Sbjct: 95 FCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240
KYRD T++HIPYRENKNLTGTARYAS NTHLGIEQSRRDDLESLGYVL+YF GSLPWQ
Sbjct: 155 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214
Query: 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300
GLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF
Sbjct: 215 GLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 274
Query: 301 DLFSREGYDFDFVFDWTILKY 321
+LF R+G+ +D+VFDW +LK+
Sbjct: 275 NLFHRQGFSYDYVFDWNMLKF 295
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/320 (64%), Positives = 255/320 (79%), Gaps = 26/320 (8%)
Query: 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ 60
ME +G +Y+LGRKIGSGSFG+I+L + + E VA+K+E TKHPQL E+K+YK++Q
Sbjct: 3 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 62
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
GG GIP I+W G +G+ NV+V++LLGPSLEDLF
Sbjct: 63 GGV--------------------------GIPTIRWCGAEGDYNVMVMELLGPSLEDLFN 96
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+C RKFSLKTVL+LADQMI+RIEY+HS+ F+HRD+KPDNFLMGLG+K N VYIIDFGLAK
Sbjct: 97 FCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240
KYRD T++HIPYRENKNLTGTARYAS NTHLGIEQSRRDDLESLGYVL+YF GSLPWQ
Sbjct: 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
Query: 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300
GLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF
Sbjct: 217 GLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276
Query: 301 DLFSREGYDFDFVFDWTILK 320
+LF R+G+ +D+VFDW +LK
Sbjct: 277 NLFHRQGFSYDYVFDWNMLK 296
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 337 bits (864), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 166/318 (52%), Positives = 212/318 (66%), Gaps = 28/318 (8%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
++GV YK+GR+IG GSFG IF +++ N+ VA+K E + PQL E + YK+L G +
Sbjct: 7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCT 66
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
GIPN+ ++G +G NVLV+DLLGPSLEDL C
Sbjct: 67 --------------------------GIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG 100
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL--GRKANQVYIIDFGLAKK 181
RKFS+KTV M A QM+AR++ +H + ++RDIKPDNFL+G + AN +Y++DFG+ K
Sbjct: 101 RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160
Query: 182 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
YRDP T +HIPYRE KNL+GTARY S NTHLG EQSRRDDLE+LG+V +YFLRGSLPWQG
Sbjct: 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 220
Query: 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301
LKAAT KQKY++I EKK STP+ LC P EF Y HY ++L FD PDY +L+ LF
Sbjct: 221 LKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK 280
Query: 302 LFSREGYDFDFVFDWTIL 319
+ R D FDW +L
Sbjct: 281 VLERLNTTEDENFDWNLL 298
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 337 bits (863), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 166/318 (52%), Positives = 212/318 (66%), Gaps = 28/318 (8%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
++GV YK+GR+IG GSFG IF +++ N+ VA+K E + PQL E + YK+L G +
Sbjct: 6 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCT 65
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
GIPN+ ++G +G NVLV+DLLGPSLEDL C
Sbjct: 66 --------------------------GIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG 99
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL--GRKANQVYIIDFGLAKK 181
RKFS+KTV M A QM+AR++ +H + ++RDIKPDNFL+G + AN +Y++DFG+ K
Sbjct: 100 RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 159
Query: 182 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
YRDP T +HIPYRE KNL+GTARY S NTHLG EQSRRDDLE+LG+V +YFLRGSLPWQG
Sbjct: 160 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 219
Query: 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301
LKAAT KQKY++I EKK STP+ LC P EF Y HY ++L FD PDY +L+ LF
Sbjct: 220 LKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK 279
Query: 302 LFSREGYDFDFVFDWTIL 319
+ R D FDW +L
Sbjct: 280 VLERLNTTEDENFDWNLL 297
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 332 bits (851), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 223/315 (70%), Gaps = 29/315 (9%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
++G +++G+KIG G+FGE+ L ++ TNE VA+K+E ++ PQL E + YK L G
Sbjct: 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGD 65
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
GIP + ++G G+ N +VL+LLGPSLEDLF C
Sbjct: 66 --------------------------GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD 99
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL-GRKANQV-YIIDFGLAKK 181
R FSLKTVLM+A Q+I+R+EYVHS+ ++RD+KP+NFL+G G K QV +IIDFGLAK+
Sbjct: 100 RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKE 159
Query: 182 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
Y DP T +HIPYRE+K+LTGTARY S NTHLG EQSRRDDLE+LG++ +YFLRGSLPWQG
Sbjct: 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 219
Query: 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301
LKA T K++Y KI + K +TPIEVLC++ P E A+Y Y + L F ++PDY +L++LF D
Sbjct: 220 LKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD 278
Query: 302 LFSREGYDFDFVFDW 316
LF R+GY FD+ +DW
Sbjct: 279 LFDRKGYMFDYEYDW 293
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 331 bits (848), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 166/315 (52%), Positives = 222/315 (70%), Gaps = 29/315 (9%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
++G +++G+KIG G+FGE+ L ++ TNE VA+K+E ++ PQL E + YK L G
Sbjct: 27 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGD 86
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
GIP + ++G G+ N +VL+LLGPSLEDLF C
Sbjct: 87 --------------------------GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD 120
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL-GRKANQV-YIIDFGLAKK 181
R FSLKTVLM+A Q+I+R+EYVHS+ ++RD+KP+NFL+G G K QV +IIDF LAK+
Sbjct: 121 RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 180
Query: 182 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
Y DP T +HIPYRE+K+LTGTARY S NTHLG EQSRRDDLE+LG++ +YFLRGSLPWQG
Sbjct: 181 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 240
Query: 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301
LKA T K++Y KI + K +TPIEVLC++ P E A+Y Y + L F ++PDY +L++LF D
Sbjct: 241 LKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD 299
Query: 302 LFSREGYDFDFVFDW 316
LF R+GY FD+ +DW
Sbjct: 300 LFDRKGYMFDYEYDW 314
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 330 bits (847), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 166/315 (52%), Positives = 222/315 (70%), Gaps = 29/315 (9%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
++G +++G+KIG G+FGE+ L ++ TNE VA+K+E ++ PQL E + YK L G
Sbjct: 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGD 65
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
GIP + ++G G+ N +VL+LLGPSLEDLF C
Sbjct: 66 --------------------------GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD 99
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL-GRKANQV-YIIDFGLAKK 181
R FSLKTVLM+A Q+I+R+EYVHS+ ++RD+KP+NFL+G G K QV +IIDF LAK+
Sbjct: 100 RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159
Query: 182 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
Y DP T +HIPYRE+K+LTGTARY S NTHLG EQSRRDDLE+LG++ +YFLRGSLPWQG
Sbjct: 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 219
Query: 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301
LKA T K++Y KI + K +TPIEVLC++ P E A+Y Y + L F ++PDY +L++LF D
Sbjct: 220 LKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD 278
Query: 302 LFSREGYDFDFVFDW 316
LF R+GY FD+ +DW
Sbjct: 279 LFDRKGYMFDYEYDW 293
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 328 bits (841), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/315 (50%), Positives = 220/315 (69%), Gaps = 28/315 (8%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
+G +++G+KIG G+FGE+ L ++ TNE VA+K+E ++ PQL E + YK L
Sbjct: 2 MGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQL----- 56
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
S G+P + ++G G+ N +VL+LLGPSLEDLF C R
Sbjct: 57 ---------------------SATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDR 95
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL--GRKANQVYIIDFGLAKKY 182
F+LKTVLM+A Q+I R+EYVH++ ++RD+KP+NFL+G ++ + ++IIDFGLAK+Y
Sbjct: 96 TFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEY 155
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
DP T +HIPYRE+K+LTGTARY S NTHLG EQSRRDDLE+LG++ +YFLRGSLPWQGL
Sbjct: 156 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL 215
Query: 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302
KA T K++Y KI + K +TPIEVLC++ P E A+Y Y + L F ++PDY +L++LF DL
Sbjct: 216 KADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 275
Query: 303 FSREGYDFDFVFDWT 317
F R G+ FD+ +DW
Sbjct: 276 FDRSGFVFDYEYDWA 290
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 325 bits (833), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 217/310 (70%), Gaps = 27/310 (8%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVV 69
++G+KIG G+FGE+ L ++ TNE VA+K+E ++ PQL E + YK L +
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGE----- 57
Query: 70 FHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLK 129
G+P + ++G G+ N +VL+LLGPSLEDLF C R F+LK
Sbjct: 58 --------------------GLPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLK 97
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL--GRKANQVYIIDFGLAKKYRDPTT 187
TVLM+A Q+++R+EYVHS+ ++RD+KP+NFL+G +K + ++IIDFGLAK+Y DP T
Sbjct: 98 TVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPET 157
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK 247
+HIPYRE+K+LTGTARY S NTHLG EQSRRDDLE+LG++ +YFLRGSLPWQGLKA T
Sbjct: 158 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL 217
Query: 248 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 307
K++Y KI + K +TPIE LC++ P E A+Y Y + L F ++PDY +L+ LF DLF ++G
Sbjct: 218 KERYQKIGDTKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKKG 277
Query: 308 YDFDFVFDWT 317
Y FD+ +DW
Sbjct: 278 YTFDYAYDWV 287
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 30/312 (9%)
Query: 1 MERIIGVKYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKV 55
++ + G ++ LG+KIGSG FG I+LA D +V V+ + +G L E K
Sbjct: 31 LDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGP----LFSELKF 86
Query: 56 YKILQGGSKIRLVVF--HVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP 113
Y+ + I+ + +D++ + + + S L + +V++ LG
Sbjct: 87 YQRVAKKDCIKKWIERKQLDYL---GIPLFYGSGLTEFKGRSY-------RFMVMERLGI 136
Query: 114 SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173
L+ + F TVL L +M+ +EY+H ++H DIK N L+G + +QVY+
Sbjct: 137 DLQKISGQ-NGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGY-KNPDQVYL 194
Query: 174 IDFGLAKKYRDPTTNRHIPYREN--KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY 231
D+GL+ YR H Y+EN K GT + S + H G+ SRR D+E LGY +L
Sbjct: 195 ADYGLS--YRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLR 252
Query: 232 FLRGSLPW-QGLK--AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQ 288
+L G LPW Q LK A + K + + E S S E A + SL +D+
Sbjct: 253 WLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDE 312
Query: 289 RPDYGFLKRLFH 300
+P+Y LK++ +
Sbjct: 313 KPNYQALKKILN 324
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 154/329 (46%), Gaps = 35/329 (10%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
++K+G IG G FG I+LA V ++ VK+E S + L E K Y Q
Sbjct: 36 EWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPS--DNGPLFTELKFY---QRA 90
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDN------VLVLDLLGPSLE 116
+K + + + L G+P K++G D +++D G L+
Sbjct: 91 AKPEQIQKWIRTRKLKYL---------GVP--KYWGSGLHDKNGKSYRFMIMDRFGSDLQ 139
Query: 117 DLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
++ ++FS KTVL L+ +++ +EY+H ++H DIK N L+ + +QVY++D+
Sbjct: 140 KIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KNPDQVYLVDY 198
Query: 177 GLAKKYRDPTTNRHIPYRENKNLT--GTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR 234
GLA YR H Y+E+ GT + S + H G+ SRR DLE LGY ++ +L
Sbjct: 199 GLA--YRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT 256
Query: 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC---KSHPAEFASYFHYCQSLTFDQRPD 291
G LPW+ K + KI ++ + C K+ P E A Y + L + ++P
Sbjct: 257 GHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPL 316
Query: 292 YGFLKRLFHDLFSREGYDFDFVFDWTILK 320
Y L+ + G D D ++++
Sbjct: 317 YENLRDILLQGLKAIGSKDDGKLDLSVVE 345
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 154/329 (46%), Gaps = 35/329 (10%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
++K+G IG G FG I+LA V ++ VK+E S + L E K Y Q
Sbjct: 36 EWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPS--DNGPLFTELKFY---QRA 90
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDN------VLVLDLLGPSLE 116
+K + + + L G+P K++G D +++D G L+
Sbjct: 91 AKPEQIQKWIRTRKLKYL---------GVP--KYWGSGLHDKNGKSYRFMIMDRFGSDLQ 139
Query: 117 DLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
++ ++FS KTVL L+ +++ +EY+H ++H DIK N L+ + +QVY++D+
Sbjct: 140 KIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KNPDQVYLVDY 198
Query: 177 GLAKKYRDPTTNRHIPYRENKNLT--GTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR 234
GLA YR H Y+E+ GT + S + H G+ SRR DLE LGY ++ +L
Sbjct: 199 GLA--YRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT 256
Query: 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC---KSHPAEFASYFHYCQSLTFDQRPD 291
G LPW+ K + KI ++ + C K+ P E A Y + L + ++P
Sbjct: 257 GHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPL 316
Query: 292 YGFLKRLFHDLFSREGYDFDFVFDWTILK 320
Y L+ + G D D ++++
Sbjct: 317 YENLRDILLQGLKAIGSKDDGKLDLSVVE 345
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 151/331 (45%), Gaps = 31/331 (9%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKI 58
+ +K+G IG G FG I+LA V ++ VK+E S + L E K Y+
Sbjct: 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPS--DNGPLFTELKFYQR 89
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDN------VLVLDLLG 112
+I+ + L + G+P K++G D +++D G
Sbjct: 90 AAKPEQIQ------KWIRTRKLKYL------GVP--KYWGSGLHDKNGKSYRFMIMDRFG 135
Query: 113 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY 172
L+ ++ ++FS KTVL L+ +++ +EY+H ++H DIK N L+ + +QVY
Sbjct: 136 SDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KNPDQVY 194
Query: 173 IIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF 232
++D+GLA +Y ++ + GT + S + H G+ SRR DLE LGY ++ +
Sbjct: 195 LVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQW 254
Query: 233 LRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC---KSHPAEFASYFHYCQSLTFDQR 289
L G LPW+ K + KI ++ + C + P E A Y + L + ++
Sbjct: 255 LTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEK 314
Query: 290 PDYGFLKRLFHDLFSREGYDFDFVFDWTILK 320
P Y L+ + G D D ++++
Sbjct: 315 PLYENLRDILLQGLKAIGSKDDGKLDLSVVE 345
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 20/234 (8%)
Query: 83 IFSSTLGGIPNIKWYGVDGED-NVLVLDLLGPSLED-LFVYCRRKFSLKTVLMLADQMIA 140
++S+ L IP +GV + LVL LG SL+ L V + S ++VL +A +++
Sbjct: 111 LYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLD 170
Query: 141 RIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLT 200
+E++H ++H ++ +N + +QV + +G A +Y + +H+ Y E
Sbjct: 171 ALEFLHENEYVHGNVTAENIFVD-PEDQSQVTLAGYGFAFRYC--PSGKHVAYVEGSRSP 227
Query: 201 --GTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK---KQKYDKIC 255
G + S + H G SRR DL+SLGY +L +L G LPW T+ KQK K
Sbjct: 228 HEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQK-QKFV 286
Query: 256 EKKVSTPIEVLCKS--HPAE-FASYFHYCQSLTFDQRPDYGFLKR----LFHDL 302
+K P C P+E Y +LT++++P Y L+ L DL
Sbjct: 287 DK--PGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 94
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 95 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 128
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 129 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 182
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P +L GT Y G + DL SLG + FL G P++
Sbjct: 183 -------HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 233
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 234 -ANTYQETYKRISRVEFTFP 252
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 73
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 74 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 107
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 108 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 161
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P +L GT Y G + DL SLG + FL G P++
Sbjct: 162 -------HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 212
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 213 -ANTYQETYKRISRVEFTFP 231
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 68
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 69 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 102
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 103 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 156
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P +L GT Y G + DL SLG + FL G P++
Sbjct: 157 -------HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 207
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 208 -ANTYQETYKRISRVEFTFP 226
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 94
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 95 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 128
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 129 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 182
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 183 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 233
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 234 -ANTYQETYKRISRVEFTFP 252
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 71
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 72 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 105
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 106 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 159
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P +L GT Y G + DL SLG + FL G P++
Sbjct: 160 -------HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 210
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 211 -ANTYQETYKRISRVEFTFP 229
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 69
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 70 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 103
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 104 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 157
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P +L GT Y G + DL SLG + FL G P++
Sbjct: 158 -------HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 208
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 209 -ANTYQETYKRISRVEFTFP 227
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 73
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 74 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 107
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 108 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 161
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 162 -------HAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE-- 212
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 213 -ANTYQETYKRISRVEFTFP 231
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 69
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 70 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 103
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 104 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSC-- 157
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L+GT Y G + DL SLG + FL G P++
Sbjct: 158 -------HAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 208
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 209 -ANTYQETYKRISRVEFTFP 227
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 68
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 69 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 102
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 103 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 156
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P +L GT Y G + DL SLG + FL G P++
Sbjct: 157 -------HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 207
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 208 -ANTYQETYKRISRVEFTFP 226
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 68
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 69 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 102
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 103 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 156
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 157 -------HAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 207
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 208 -ANTYQETYKRISRVEFTFP 226
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 68
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 69 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 102
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 103 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 156
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 157 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 207
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 208 -ANTYQETYKRISRVEFTFP 226
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 73
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 74 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 107
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 108 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 161
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 162 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 212
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 213 -ANTYQETYKRISRVEFTFP 231
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 69
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 70 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 103
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 104 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 157
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 158 -------HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 208
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 209 -ANTYQETYKRISRVEFTFP 227
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 85
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 86 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 119
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 120 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 173
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 174 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 224
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 225 -ANTYQETYKRISRVEFTFP 243
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 72
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 73 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 106
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 107 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 160
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 161 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 211
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 212 -ANTYQETYKRISRVEFTFP 230
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 71
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 72 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 105
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 106 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 159
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 160 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 210
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 211 -ANTYQETYKRISRVEFTFP 229
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 73
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I Y GE + L+ L
Sbjct: 74 NILRLYGYFHDATRVYL--------------ILEYAPRGE--------VYKELQKL---- 107
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 108 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 161
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 162 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 212
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 213 -ANTYQETYKRISRVEFTFP 231
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 70
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 71 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 104
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 105 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 158
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 159 -------HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 209
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 210 -ANTYQETYKRISRVEFTFP 228
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 67
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 68 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 101
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 102 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 155
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 156 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 206
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 207 -ANTYQETYKRISRVEFTFP 225
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 71
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 72 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 105
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 106 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 159
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 160 -------HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 210
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 211 -ANTYQETYKRISRVEFTFP 229
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 68
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 69 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 102
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 103 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 156
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 157 -------HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 207
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 208 -ANTYQETYKRISRVEFTFP 226
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 71
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 72 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 105
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 106 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 159
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 160 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 210
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 211 -ANTYQETYKRISRVEFTFP 229
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 68
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 69 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 102
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 103 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 156
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 157 -------HAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 207
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 208 -ANTYQETYKRISRVEFTFP 226
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA ++ I+A+K+ E +G +H QL E ++ L+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 68
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 69 NILRLYGYFHDSTRVY--LILEYAPLGTVYR--------------------ELQKL---- 102
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 103 -SKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLG---SAGELKIADFGWSV-- 156
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 157 -------HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 207
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T + Y +I + + P
Sbjct: 208 -ANTYQDTYKRISRVEFTFP 226
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 68
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 69 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 102
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 103 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 156
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 157 -------HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 207
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 208 -ANTYQETYKRISRVEFTFP 226
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 71
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 72 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 105
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 106 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 159
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 160 -------HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 210
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 211 -ANTYQETYKRISRVEFTFP 229
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 73
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I Y GE + L+ L
Sbjct: 74 NILRLYGYFHDATRVYL--------------ILEYAPRGE--------VYKELQKL---- 107
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 108 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 161
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 162 -------HAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 212
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 213 -ANTYQETYKRISRVEFTFP 231
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA I+A+K+ E +G +H QL E ++ L+
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 65
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 66 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 99
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I DFG +
Sbjct: 100 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV-- 153
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 154 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 204
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 205 -ANTYQETYKRISRVEFTFP 223
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 71
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 72 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 105
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I +FG +
Sbjct: 106 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIANFGWSV-- 159
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 160 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 210
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 211 -ANTYQETYKRISRVEFTFP 229
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSHLRHP 70
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 71 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 104
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF + ++ + Y HS+ +HRDIKP+N L+G A ++ I +FG +
Sbjct: 105 -SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIANFGWSV-- 158
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 159 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-- 209
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 210 -ANTYQETYKRISRVEFTFP 228
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 45/246 (18%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIEN---SGTKHPQLLYEAKVYKILQGGSKIRLVV 69
RK+GSG+FG++ L + +K N S Q+ E +V K L + I++
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 70 FHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLK 129
D+ H + I+ + GG + + ++ G +L + +V
Sbjct: 88 VFEDY---HNMYIVMETCEGG---------ELLERIVSAQARGKALSEGYV--------- 126
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 189
L QM+ + Y HS+ +H+D+KP+N L + + IIDFGLA+ ++ ++
Sbjct: 127 --AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK---SDE 181
Query: 190 HIPYRENKNLTGTARYASCNTHLGIEQSRRD-----DLESLGYVLLYFLRGSLPWQGLKA 244
H + N GTA Y + E +RD D+ S G V+ + L G LP+ G
Sbjct: 182 H-----STNAAGTALY------MAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL 230
Query: 245 ATKKQK 250
+QK
Sbjct: 231 EEVQQK 236
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 45/245 (18%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-----ENSGTKHPQLLYEAKVYKI 58
I +YK R +G GSFGE+ L T + AVK+ T LL E ++ K
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
L + ++L F D + + +++ GG +L
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYT---GG--------------------------EL 113
Query: 119 F--VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
F + R++FS + Q+++ I Y+H +HRD+KP+N L+ K + IIDF
Sbjct: 114 FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 173
Query: 177 GLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236
GL+ + ++ K+ GTA Y + G + D+ S G +L L G
Sbjct: 174 GLSTHFE--------ASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGC 224
Query: 237 LPWQG 241
P+ G
Sbjct: 225 PPFNG 229
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 45/245 (18%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-----ENSGTKHPQLLYEAKVYKI 58
I +YK R +G GSFGE+ L T + AVK+ T LL E ++ K
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 106
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
L + ++L F D + + +++ GG +L
Sbjct: 107 LDHPNIMKLYEFFEDKGYFYLVGEVYT---GG--------------------------EL 137
Query: 119 F--VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
F + R++FS + Q+++ I Y+H +HRD+KP+N L+ K + IIDF
Sbjct: 138 FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 197
Query: 177 GLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236
GL+ + ++ K+ GTA Y + G + D+ S G +L L G
Sbjct: 198 GLSTHFE--------ASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGC 248
Query: 237 LPWQG 241
P+ G
Sbjct: 249 PPFNG 253
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 45/245 (18%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-----ENSGTKHPQLLYEAKVYKI 58
I +YK R +G GSFGE+ L T + AVK+ T LL E ++ K
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 105
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
L + ++L F D + + +++ GG +L
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLVGEVYT---GG--------------------------EL 136
Query: 119 F--VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
F + R++FS + Q+++ I Y+H +HRD+KP+N L+ K + IIDF
Sbjct: 137 FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 196
Query: 177 GLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236
GL+ + ++ K+ GTA Y + G + D+ S G +L L G
Sbjct: 197 GLSTHFE--------ASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGC 247
Query: 237 LPWQG 241
P+ G
Sbjct: 248 PPFNG 252
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 25/234 (10%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+LG +G G E+ LA + + VAVK+ + L + Y + ++
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
+ H V ++A T + G +P I VDG +L D+ V+ +
Sbjct: 68 ALNHPAIVAVYA-TGEAETPAGPLPYIVMEYVDGV-----------TLRDI-VHTEGPMT 114
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
K + + + + H G +HRD+KP N ++ N V ++DFG+A+ D
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGN 171
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + + GTA+Y S G R D+ SLG VL L G P+ G
Sbjct: 172 S----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 42/238 (17%)
Query: 9 YKLGRKIGSGSFGEIFL----ASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
Y+ +K+GSG++GE+ L +HV+ + K S + + +LL E V K+L
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL----- 93
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR 123
DH I L F D + LV++ G L D ++ R
Sbjct: 94 --------DHPNIMKLYDFFE--------------DKRNYYLVMECYKGGELFDEIIH-R 130
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
KF+ ++ Q+++ + Y+H +HRD+KP+N L+ K + I+DFGL+ +
Sbjct: 131 MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190
Query: 184 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ ++ K GTA Y + L + + D+ S+G +L L G P+ G
Sbjct: 191 NQ--------KKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFGG 239
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 52/241 (21%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENS---GTKHPQLLYEAKVYKILQGGSKI 65
Y+L IG+G F ++ LA H+ T E+VA+KI + G+ P++ E + K L+
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRK 125
+L +HV T I + Y GE + D ++ + +
Sbjct: 72 QL--YHV------------LETANKIFMVLEYCPGGE----LFD---------YIISQDR 104
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
S + ++ Q+++ + YVHS+G+ HRD+KP+N L + +++ +IDFGL K P
Sbjct: 105 LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD---EYHKLKLIDFGLCAK---P 158
Query: 186 TTNR--HIPYRENKNLTGTARYASCN-----THLGIEQSRRDDLESLGYVLLYFLRGSLP 238
N+ H+ + G+ YA+ ++LG E D+ S+G +L + G LP
Sbjct: 159 KGNKDYHL-----QTCCGSLAYAAPELIQGKSYLGSEA----DVWSMGILLYVLMCGFLP 209
Query: 239 W 239
+
Sbjct: 210 F 210
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-----ENSGTKHPQLLYEAKVYKI 58
I +YK R +G GSFGE+ L T + AVK+ T LL E ++ K
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 88
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
L + ++L F D + + +++ G L D
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLVGEVYT--------------------------GGELFDE 122
Query: 119 FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
+ R++FS + Q+++ I Y+H +HRD+KP+N L+ K + IIDFGL
Sbjct: 123 II-SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 181
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
+ + ++ K+ GTA Y + G + D+ S G +L L G P
Sbjct: 182 STHFEAS--------KKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
Query: 239 WQG 241
+ G
Sbjct: 233 FNG 235
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 25/234 (10%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+LG +G G E+ LA + + VAVK+ + L + Y + ++
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
+ H V ++ T + G +P I VDG +L D+ V+ +
Sbjct: 68 ALNHPAIVAVYD-TGEAETPAGPLPYIVMEYVDGV-----------TLRDI-VHTEGPMT 114
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
K + + + + H G +HRD+KP N L+ N V ++DFG+A+ D
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANILIS---ATNAVKVVDFGIARAIADSGN 171
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + + GTA+Y S G R D+ SLG VL L G P+ G
Sbjct: 172 S----VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 45/245 (18%)
Query: 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-----ENSGTKHPQLLYEAKVYKI 58
I +YK R +G GSFGE+ L T + AVK+ T LL E ++ K
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
L + +L F D + + +++ GG +L
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYT---GG--------------------------EL 113
Query: 119 F--VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
F + R++FS + Q+++ I Y H +HRD+KP+N L+ K + IIDF
Sbjct: 114 FDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDF 173
Query: 177 GLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236
GL+ + ++ K+ GTA Y + G + D+ S G +L L G
Sbjct: 174 GLSTHFE--------ASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGC 224
Query: 237 LPWQG 241
P+ G
Sbjct: 225 PPFNG 229
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+ +GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEH-QLRREVEIQSHLRHP 72
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 73 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 106
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+F + ++ + Y HS+ +HRDIKP+N L+G ++ I DFG +
Sbjct: 107 -SRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SNGELKIADFGWSV-- 160
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 161 -------HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE-- 211
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 212 -AHTYQETYRRISRVEFTFP 230
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 49/260 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+ +GR +G G FG ++LA + I+A+K+ E +G +H QL E ++ L+
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEH-QLRREVEIQSHLRHP 72
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D ++ I+ + LG + L+ L
Sbjct: 73 NILRLYGYFHDATRVY--LILEYAPLGTVYR--------------------ELQKL---- 106
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+F + ++ + Y HS+ +HRDIKP+N L+G ++ I DFG +
Sbjct: 107 -SRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SNGELKIADFGWSV-- 160
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P L GT Y G + DL SLG + FL G P++
Sbjct: 161 -------HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE-- 211
Query: 243 KAATKKQKYDKICEKKVSTP 262
A T ++ Y +I + + P
Sbjct: 212 -AHTYQETYRRISRVEFTFP 230
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 25/234 (10%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+LG +G G E+ LA + + VAVK+ + L + Y + ++
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
+ H V ++ T + G +P I VDG +L D+ V+ +
Sbjct: 68 ALNHPAIVAVYD-TGEAETPAGPLPYIVMEYVDGV-----------TLRDI-VHTEGPMT 114
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
K + + + + H G +HRD+KP N ++ N V ++DFG+A+ D
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGN 171
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + + GTA+Y S G R D+ SLG VL L G P+ G
Sbjct: 172 S----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 25/234 (10%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+LG +G G E+ LA + + VAVK+ + L + Y + ++
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
+ H V ++ T + G +P I VDG +L D+ V+ +
Sbjct: 68 ALNHPAIVAVYD-TGEAETPAGPLPYIVMEYVDGV-----------TLRDI-VHTEGPMT 114
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
K + + + + H G +HRD+KP N ++ N V ++DFG+A+ D
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGN 171
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + + GTA+Y S G R D+ SLG VL L G P+ G
Sbjct: 172 S----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 86
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 87 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 130
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 131 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 186
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N + GTA+Y S + DL +LG ++ + G P++
Sbjct: 187 SKQA---RAN-SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 25/234 (10%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+LG +G G E+ LA + + VAVK+ + L + Y + ++
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
+ H V ++ T + G +P I VDG +L D+ V+ +
Sbjct: 68 ALNHPAIVAVYD-TGEAETPAGPLPYIVMEYVDGV-----------TLRDI-VHTEGPMT 114
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
K + + + + H G +HRD+KP N ++ N V ++DFG+A+ D
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGN 171
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + + GTA+Y S G R D+ SLG VL L G P+ G
Sbjct: 172 S----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 85
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L L Y R+ F
Sbjct: 86 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSF 129
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 185
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N + GTA+Y S S+ DL +LG ++ + G P++
Sbjct: 186 SKQA---RAN-SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ IG+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + D+F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 43/267 (16%)
Query: 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVK---IENSGTKHPQLLYEAKVYKIL 59
+II +YK+ K+G G ++LA N VA+K I + +E +V+
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN-- 64
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV--LVLDLL-GPSLE 116
SS L + VD ED+ LV++ + GP+L
Sbjct: 65 -------------------------SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLS 99
Query: 117 DLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
+ ++ S+ T + +Q++ I++ H +HRDIKP N L+ + + I DF
Sbjct: 100 E-YIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKT---LKIFDF 155
Query: 177 GLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236
G+AK + + + ++ GT +Y S G D+ S+G VL L G
Sbjct: 156 GIAKALSETS------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
Query: 237 LPWQGLKAATKKQKYDKICEKKVSTPI 263
P+ G A + K+ + V+T +
Sbjct: 210 PPFNGETAVSIAIKHIQDSVPNVTTDV 236
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ IG+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + D+F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 29/236 (12%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+LG +G G E+ LA + + VAVK+ + Y + + Q + +
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY-LRFRREAQNAAAL-- 86
Query: 68 VVFHVDHVIIHAL--TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRK 125
+H I A+ T + G +P I VDG +L D+ V+
Sbjct: 87 -----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGV-----------TLRDI-VHTEGP 129
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
+ K + + + + H G +HRD+KP N ++ N V ++DFG+A+ D
Sbjct: 130 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADS 186
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + + GTA+Y S G R D+ SLG VL L G P+ G
Sbjct: 187 GNS----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 90
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 91 MSRLDHPFF----------------VKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSF 134
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 135 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 190
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 191 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 83
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 84 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 128 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 183
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 184 SKQA---RANA-FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 88
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 89 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 132
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 133 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 188
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 189 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 85
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 86 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 185
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 186 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 85
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 86 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 185
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 186 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 83
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 84 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 128 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 183
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 184 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 86
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 87 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 130
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 131 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 186
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 187 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 83
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 84 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 128 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 183
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 184 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 85
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 86 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 185
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 186 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 85
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 86 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 185
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 186 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 62
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 63 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 106
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 107 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 162
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 163 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 63
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 64 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 107
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 108 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 163
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 164 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 85
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 86 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 129
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 130 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 185
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 186 SKQA---RAN-XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 82
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 83 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 126
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 127 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 182
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N + GTA+Y S + DL +LG ++ + G P++
Sbjct: 183 SKQA---RAN-SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 61
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 62 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 105
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 106 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 161
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 162 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 60
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 61 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 104
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 105 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 160
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 161 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 67
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 68 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 111
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 112 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 167
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 168 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQIEHTLN------ 91
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F + L + N+ ++ P E +F + RR +FS
Sbjct: 92 EKRILQAVNFPFLTKLE-------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N ++ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF + LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 82
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 83 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 126
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 127 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 182
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 183 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQIEHTLN------ 91
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F + L + N+ ++ P E +F + RR +FS
Sbjct: 92 EKRILQAVNFPFLTKLE-------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N ++ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ IG+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 39/237 (16%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
++L + +G GSFG++FLA TN+ A+K K +L + V + + R++
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIK----ALKKDVVLMDDDVECTM---VEKRVL 72
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR--RKF 126
+H + + F + E+ V++ L DL + + KF
Sbjct: 73 SLAWEHPFLTHMFCTFQTK--------------ENLFFVMEYLNGG--DLMYHIQSCHKF 116
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR--D 184
L A ++I ++++HS+G ++RD+K DN L+ K + I DFG+ K+ D
Sbjct: 117 DLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGD 173
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
TN GT Y + LG + + D S G +L L G P+ G
Sbjct: 174 AKTNE---------FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 221
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 34/235 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K G+ +G GSF LA + T+ A+KI + ++ E KV + ++ R V
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKI----LEKRHIIKENKVPYV----TRERDV 83
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KF 126
+ +DH +K Y +D L L +L Y R+ F
Sbjct: 84 MSRLDHPFF----------------VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 127
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++++ +EY+H +G +HRD+KP+N L+ + + I DFG A K P
Sbjct: 128 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPE 183
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + R N GTA+Y S + DL +LG ++ + G P++
Sbjct: 184 SKQA---RAN-XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 86
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 87 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------TLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQIEHTLN------ 90
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F L + N+ ++ P E +F + RR +FS
Sbjct: 91 EKRILQAVNFPFLVKLE-------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N ++ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 53/280 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
+++L + +G GSFG++FL + D ++ A+K+ T L +V ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT----LKVRDRVRTKME---- 76
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
R ++ V+H I L F + K Y L+LD L DLF +
Sbjct: 77 -RDILVEVNHPFIVKLHYAFQT------EGKLY--------LILDFLRGG--DLFTRLSK 119
Query: 125 K--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ F+ + V ++ ++++HS G ++RD+KP+N L+ + + + DFGL+K+
Sbjct: 120 EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKES 176
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
D + + GT Y + ++ D S G ++ L G+LP+QG
Sbjct: 177 IDHEKKAY-------SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG- 228
Query: 243 KAATKKQKYDKICEKKVSTP----------IEVLCKSHPA 272
+K+ I + K+ P + +L K +PA
Sbjct: 229 --KDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPA 266
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 71
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 72 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 128
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 129 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 182
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 183 -------TLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 232
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 233 YEKIVSGKVRFP 244
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 131/324 (40%), Gaps = 65/324 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI--------ENSGTKHPQLLYEAKVYKIL 59
+Y + + +GSG+ GE+ LA T + VA+KI ++ P L E ++ +IL
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI-EIL 75
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDL 118
+ ++H I + F D ED +VL+L+ G L D
Sbjct: 76 K----------KLNHPCIIKIKNFF---------------DAEDYYIVLELMEGGELFDK 110
Query: 119 FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
V +R T + QM+ ++Y+H G +HRD+KP+N L+ + + I DFG
Sbjct: 111 VVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 169
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS---RRDDLESLGYVLLYFLRG 235
+K + + R L GT Y + + + + R D SLG +L L G
Sbjct: 170 SKILGETSLMR--------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
Query: 236 SLPWQ------GLKAATKKQKYD-------KICEKKVSTPIEVLCKSHPAEFASYFHYCQ 282
P+ LK KY+ ++ EK + ++L A F +
Sbjct: 222 YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 281
Query: 283 SLTFDQRPDYGFLKRLFHDLFSRE 306
D+ +KR F DL S E
Sbjct: 282 PWLQDED-----MKRKFQDLLSEE 300
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ + +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKEIEHTLN------ 90
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F L + N+ ++ P E +F + RR +FS
Sbjct: 91 EKRILQAVNFPFLVKLE-------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N ++ + + + DFGLAK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGYIQVTDFGLAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 131/324 (40%), Gaps = 65/324 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI--------ENSGTKHPQLLYEAKVYKIL 59
+Y + + +GSG+ GE+ LA T + VA+KI ++ P L E ++ +IL
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI-EIL 69
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDL 118
+ ++H I + F D ED +VL+L+ G L D
Sbjct: 70 K----------KLNHPCIIKIKNFF---------------DAEDYYIVLELMEGGELFDK 104
Query: 119 FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
V +R T + QM+ ++Y+H G +HRD+KP+N L+ + + I DFG
Sbjct: 105 VVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS---RRDDLESLGYVLLYFLRG 235
+K + + R L GT Y + + + + R D SLG +L L G
Sbjct: 164 SKILGETSLMR--------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Query: 236 SLPWQ------GLKAATKKQKYD-------KICEKKVSTPIEVLCKSHPAEFASYFHYCQ 282
P+ LK KY+ ++ EK + ++L A F +
Sbjct: 216 YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 283 SLTFDQRPDYGFLKRLFHDLFSRE 306
D+ +KR F DL S E
Sbjct: 276 PWLQDED-----MKRKFQDLLSEE 294
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 86
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 87 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQIEHTLN------ 90
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F L + N+ ++ P E +F + RR +FS
Sbjct: 91 EKRILQAVNFPFLVKLE-------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N ++ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ + +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKEIEHTLN------ 90
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F L + N+ ++ P E +F + RR +FS
Sbjct: 91 EKRILQAVNFPFLVKLE-------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N ++ + + + DFGLAK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGLAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 131/324 (40%), Gaps = 65/324 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI--------ENSGTKHPQLLYEAKVYKIL 59
+Y + + +GSG+ GE+ LA T + VA+KI ++ P L E ++ +IL
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI-EIL 69
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDL 118
+ ++H I + F D ED +VL+L+ G L D
Sbjct: 70 K----------KLNHPCIIKIKNFF---------------DAEDYYIVLELMEGGELFDK 104
Query: 119 FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
V +R T + QM+ ++Y+H G +HRD+KP+N L+ + + I DFG
Sbjct: 105 VVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS---RRDDLESLGYVLLYFLRG 235
+K + + R L GT Y + + + + R D SLG +L L G
Sbjct: 164 SKILGETSLMR--------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Query: 236 SLPWQ------GLKAATKKQKYD-------KICEKKVSTPIEVLCKSHPAEFASYFHYCQ 282
P+ LK KY+ ++ EK + ++L A F +
Sbjct: 216 YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 283 SLTFDQRPDYGFLKRLFHDLFSRE 306
D+ +KR F DL S E
Sbjct: 276 PWLQDED-----MKRKFQDLLSEE 294
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 131/324 (40%), Gaps = 65/324 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI--------ENSGTKHPQLLYEAKVYKIL 59
+Y + + +GSG+ GE+ LA T + VA+KI ++ P L E ++ +IL
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI-EIL 68
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDL 118
+ ++H I + F D ED +VL+L+ G L D
Sbjct: 69 K----------KLNHPCIIKIKNFF---------------DAEDYYIVLELMEGGELFDK 103
Query: 119 FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
V +R T + QM+ ++Y+H G +HRD+KP+N L+ + + I DFG
Sbjct: 104 VVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 162
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS---RRDDLESLGYVLLYFLRG 235
+K + + R L GT Y + + + + R D SLG +L L G
Sbjct: 163 SKILGETSLMR--------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
Query: 236 SLPWQ------GLKAATKKQKYD-------KICEKKVSTPIEVLCKSHPAEFASYFHYCQ 282
P+ LK KY+ ++ EK + ++L A F +
Sbjct: 215 YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 274
Query: 283 SLTFDQRPDYGFLKRLFHDLFSRE 306
D+ +KR F DL S E
Sbjct: 275 PWLQDED-----MKRKFQDLLSEE 293
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 131/324 (40%), Gaps = 65/324 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI--------ENSGTKHPQLLYEAKVYKIL 59
+Y + + +GSG+ GE+ LA T + VA+KI ++ P L E ++ +IL
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI-EIL 69
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDL 118
+ ++H I + F D ED +VL+L+ G L D
Sbjct: 70 K----------KLNHPCIIKIKNFF---------------DAEDYYIVLELMEGGELFDK 104
Query: 119 FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
V +R T + QM+ ++Y+H G +HRD+KP+N L+ + + I DFG
Sbjct: 105 VVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS---RRDDLESLGYVLLYFLRG 235
+K + + R L GT Y + + + + R D SLG +L L G
Sbjct: 164 SKILGETSLMR--------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Query: 236 SLPWQ------GLKAATKKQKYD-------KICEKKVSTPIEVLCKSHPAEFASYFHYCQ 282
P+ LK KY+ ++ EK + ++L A F +
Sbjct: 216 YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 283 SLTFDQRPDYGFLKRLFHDLFSRE 306
D+ +KR F DL S E
Sbjct: 276 PWLQDED-----MKRKFQDLLSEE 294
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKI----------LDKQKVVKLKQIEHTLN------ 90
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F L Y N+ ++ P E +F + RR +FS
Sbjct: 91 EKRILQAVNFPFLVKLE-------YSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKI----------LDKQKVVKLKQIEHTLN------ 90
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F L Y N+ ++ P E +F + RR +FS
Sbjct: 91 EKRILQAVNFPFLVKLE-------YSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 53/280 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
+++L + +G GSFG++FL + D ++ A+K+ T L +V ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT----LKVRDRVRTKME---- 76
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
R ++ V+H I L F + K Y L+LD L DLF +
Sbjct: 77 -RDILVEVNHPFIVKLHYAFQT------EGKLY--------LILDFLRGG--DLFTRLSK 119
Query: 125 K--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ F+ + V ++ ++++HS G ++RD+KP+N L+ + + + DFGL+K+
Sbjct: 120 EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKES 176
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
D + + GT Y + ++ D S G ++ L G+LP+QG
Sbjct: 177 IDHEKKAY-------SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG- 228
Query: 243 KAATKKQKYDKICEKKVSTP----------IEVLCKSHPA 272
+K+ I + K+ P + +L K +PA
Sbjct: 229 --KDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPA 266
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKI----------LDKQKVVKLKQIEHTLN------ 90
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F L Y N+ ++ P E +F + RR +FS
Sbjct: 91 EKRILQAVNFPFLVKLE-------YSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 53/280 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
+++L + +G GSFG++FL + D ++ A+K+ T L +V ++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKAT----LKVRDRVRTKME---- 77
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
R ++ V+H I L F + K Y L+LD L DLF +
Sbjct: 78 -RDILVEVNHPFIVKLHYAFQT------EGKLY--------LILDFLRGG--DLFTRLSK 120
Query: 125 K--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ F+ + V ++ ++++HS G ++RD+KP+N L+ + + + DFGL+K+
Sbjct: 121 EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKES 177
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
D + + GT Y + ++ D S G ++ L G+LP+QG
Sbjct: 178 IDHEKKAY-------SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG- 229
Query: 243 KAATKKQKYDKICEKKVSTP----------IEVLCKSHPA 272
+K+ I + K+ P + +L K +PA
Sbjct: 230 --KDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPA 267
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQIEHTLN------ 91
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F + L + N+ ++ P E +F + RR +F
Sbjct: 92 EKRILQAVNFPFLTKLE-------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFXEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N ++ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 131/324 (40%), Gaps = 65/324 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI--------ENSGTKHPQLLYEAKVYKIL 59
+Y + + +GSG+ GE+ LA T + VA++I ++ P L E ++ +IL
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI-EIL 194
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDL 118
+ ++H I + F D ED +VL+L+ G L D
Sbjct: 195 K----------KLNHPCIIKIKNFF---------------DAEDYYIVLELMEGGELFDK 229
Query: 119 FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
V +R T + QM+ ++Y+H G +HRD+KP+N L+ + + I DFG
Sbjct: 230 VVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 288
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS---RRDDLESLGYVLLYFLRG 235
+K + + R L GT Y + + + + R D SLG +L L G
Sbjct: 289 SKILGETSLMR--------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
Query: 236 SLPWQ------GLKAATKKQKYD-------KICEKKVSTPIEVLCKSHPAEFASYFHYCQ 282
P+ LK KY+ ++ EK + ++L A F +
Sbjct: 341 YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400
Query: 283 SLTFDQRPDYGFLKRLFHDLFSRE 306
D+ +KR F DL S E
Sbjct: 401 PWLQDED-----MKRKFQDLLSEE 419
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 106
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 107 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 163
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGATW--- 217
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 218 -------TLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 267
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 268 YEKIVSGKVRFP 279
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 39/237 (16%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G GSFG++FLA TN+ A+K K +L + V + + R++
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIK----ALKKDVVLMDDDVECTM---VEKRVL 71
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR--RKF 126
+H + + F + E+ V++ L DL + + KF
Sbjct: 72 SLAWEHPFLTHMFCTFQTK--------------ENLFFVMEYLNGG--DLMYHIQSCHKF 115
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR--D 184
L A ++I ++++HS+G ++RD+K DN L+ K + I DFG+ K+ D
Sbjct: 116 DLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGD 172
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
TN GT Y + LG + + D S G +L L G P+ G
Sbjct: 173 AKTNX---------FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKI----------LDKQKVVKLKQ-----------I 106
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 107 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 163
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 217
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 218 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 267
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 268 YEKIVSGKVRFP 279
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 108/259 (41%), Gaps = 50/259 (19%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ----LLYEAKVYKILQGGS 63
+Y + +G GSFGE+ T + AVK+ N + + +L E ++ K L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL---- 78
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDL-LGPSLEDLFVYC 122
DH I L I D +V +L G L D +
Sbjct: 79 ---------DHPNIMKLFEILE--------------DSSSFYIVGELYTGGELFDEIIK- 114
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R++FS + Q+ + I Y+H +HRD+KP+N L+ K + IIDFGL+ +
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
+ T + K+ GTA Y + G + D+ S G +L L G+ P+ G
Sbjct: 175 QQNT--------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG- 224
Query: 243 KAATKKQKYDKICEKKVST 261
K +YD + K+V T
Sbjct: 225 -----KNEYDIL--KRVET 236
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 108/259 (41%), Gaps = 50/259 (19%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ----LLYEAKVYKILQGGS 63
+Y + +G GSFGE+ T + AVK+ N + + +L E ++ K L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL---- 78
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDL-LGPSLEDLFVYC 122
DH I L I D +V +L G L D +
Sbjct: 79 ---------DHPNIMKLFEILE--------------DSSSFYIVGELYTGGELFDEIIK- 114
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R++FS + Q+ + I Y+H +HRD+KP+N L+ K + IIDFGL+ +
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
+ T + K+ GTA Y + G + D+ S G +L L G+ P+ G
Sbjct: 175 QQNT--------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG- 224
Query: 243 KAATKKQKYDKICEKKVST 261
K +YD + K+V T
Sbjct: 225 -----KNEYDIL--KRVET 236
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKI----------LDKQKVVKLKQ-----------I 86
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 87 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKI----------LDKQKVVKLKQ-----------I 86
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 87 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKI----------LDKQKVVKLKQ-----------I 78
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 79 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 135
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 189
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 190 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 239
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 240 YEKIVSGKVRFP 251
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKI----------LDKQKVVKLKQ-----------I 86
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +FS
Sbjct: 87 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFSEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 131/325 (40%), Gaps = 65/325 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI--------ENSGTKHPQLLYEAKVYKIL 59
+Y + + +GSG+ GE+ LA T + VA++I ++ P L E ++ +IL
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI-EIL 208
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDL 118
+ ++H I + F D ED +VL+L+ G L D
Sbjct: 209 K----------KLNHPCIIKIKNFF---------------DAEDYYIVLELMEGGELFDK 243
Query: 119 FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
V +R T + QM+ ++Y+H G +HRD+KP+N L+ + + I DFG
Sbjct: 244 VVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 302
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS---RRDDLESLGYVLLYFLRG 235
+K + + R L GT Y + + + + R D SLG +L L G
Sbjct: 303 SKILGETSLMR--------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
Query: 236 SLPWQ------GLKAATKKQKYD-------KICEKKVSTPIEVLCKSHPAEFASYFHYCQ 282
P+ LK KY+ ++ EK + ++L A F +
Sbjct: 355 YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 414
Query: 283 SLTFDQRPDYGFLKRLFHDLFSREG 307
D+ +KR F DL S E
Sbjct: 415 PWLQDED-----MKRKFQDLLSEEN 434
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKI----------LDKQKVVKLKQIEHTLN------ 91
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F L + N+ ++ P E +F + RR +FS
Sbjct: 92 EKRILQAVNFPFLVKLE-------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N ++ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
R +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKI----------LDKQKVVKLKQ-----------I 86
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I + + +++ D + +VL+ P E +F + RR +FS
Sbjct: 87 EHTL-NEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEY-APGGE-MFSHLRRIGRFSEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIKVADFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLAGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +F
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFXEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 86
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +F
Sbjct: 87 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFXEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQIEHTLN------ 90
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+ I+ A+ F L + N+ ++ P E +F + RR +F
Sbjct: 91 EKRILQAVNFPFLVKLE-------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFXEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N ++ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGYIKVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H++T A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +F
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFXEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 52/260 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ----LLYEAKVYKILQGGS 63
+Y + +G GSFGE+ T + AVK+ N + + +L E ++ K L +
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF--VY 121
++L D + + +++ GG +LF +
Sbjct: 83 IMKLFEILEDSSSFYIVGELYT---GG--------------------------ELFDEII 113
Query: 122 CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181
R++FS + Q+ + I Y+H +HRD+KP+N L+ K + IIDFGL+
Sbjct: 114 KRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
Query: 182 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
++ T + K+ GTA Y + G + D+ S G +L L G+ P+ G
Sbjct: 174 FQQNT--------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG 224
Query: 242 LKAATKKQKYDKICEKKVST 261
K +YD + K+V T
Sbjct: 225 ------KNEYDIL--KRVET 236
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 86
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 87 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 143
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 197
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 198 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 247
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 248 YEKIVSGKVRFP 259
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYQMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLXGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADEPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 9 YKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKI 65
++L + +G GSFG++FL V D+ + A+K+ T L +V ++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKAT----LKVRDRVRTKME----- 80
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRK 125
R ++ V+H + L F + K Y L+LD L DLF ++
Sbjct: 81 RDILADVNHPFVVKLHYAFQT------EGKLY--------LILDFLRGG--DLFTRLSKE 124
Query: 126 --FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
F+ + V ++ ++++HS G ++RD+KP+N L+ + + + DFGL+K+
Sbjct: 125 VMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKEAI 181
Query: 184 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243
D + + GT Y + S D S G ++ L GSLP+QG
Sbjct: 182 DHEKKAY-------SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQG-- 232
Query: 244 AATKKQKYDKICEKKVSTP 262
+K+ I + K+ P
Sbjct: 233 -KDRKETMTLILKAKLGMP 250
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 72
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 73 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 129
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 130 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---EQGYIQVTDFGFAKRVKGRTW--- 183
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 184 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 233
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 234 YEKIVSGKVRFP 245
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+K+G +G GSF ++ A + T VA+K+ + + +Y+A + + +Q KI
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDK-----KAMYKAGMVQRVQNEVKIHCQ 67
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRK-FS 127
+ H I + Y D LVL++ + ++ R K FS
Sbjct: 68 LKH-----------------PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFS 110
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
Q+I + Y+HS G LHRD+ N L L R N + I DFGLA + +
Sbjct: 111 ENEARHFMHQIITGMLYLHSHGILHRDLTLSNLL--LTRNMN-IKIADFGLATQLK---- 163
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+P+ ++ L GT Y S D+ SLG + L G P+
Sbjct: 164 ---MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPAIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 103/254 (40%), Gaps = 39/254 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 54
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 55 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 157
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 158 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 212
Query: 246 TKKQKYDKICEKKV 259
Q+Y EKK
Sbjct: 213 DSCQEYSDWKEKKT 226
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 128/298 (42%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L +++G+G FGE+++ + + N VA+K GT P+ L EA++ K L+ ++L
Sbjct: 12 QLIKRLGNGQFGEVWMGTW-NGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL- 69
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ ++ I + ++ + DGE L L P+L D
Sbjct: 70 -----YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKL----PNLVD----------- 109
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+A Q+ A + Y+ ++HRD++ N L+G G I DFGLA+ D N
Sbjct: 110 -----MAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICK---IADFGLARLIED---N 158
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAAT 246
+ K + TA A+ I + D+ S G +L + +G +P+ G+
Sbjct: 159 EXTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELVTKGRVPYPGM---N 211
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ +++ E+ P C P +C ++RP + +L+ D F+
Sbjct: 212 NREVLEQV-ERGYRMPCPQDC---PISLHELMIHCWKKDPEERPTFEYLQSFLEDYFT 265
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 103/254 (40%), Gaps = 39/254 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKKV 259
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKKT 225
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSXQEYSDWKEKK 224
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 104/253 (41%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 54
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I ++ L +K+YG E N+ L L S +LF +
Sbjct: 55 ------------EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 157
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 158 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 212
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 213 DSCQEYSDWKEKK 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 34/183 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVA---VKIENSGTKHPQ-LLYEAKVYKILQGGS 63
KY+ KIG G++G +F A + +T+EIVA V++++ P L E + K L+ +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
+RL H ++H+ + LV + L+ F C
Sbjct: 63 IVRL------HDVLHS---------------------DKKLTLVFEFCDQDLKKYFDSCN 95
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+ V Q++ + + HSR LHRD+KP N L+ + ++ + DFGLA+ +
Sbjct: 96 GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLADFGLARAFG 152
Query: 184 DPT 186
P
Sbjct: 153 IPV 155
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 54
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 55 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 157
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 158 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 212
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 213 DSCQEYSDWKEKK 225
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 54
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 55 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 157
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 158 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 212
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 213 DSCQEYSDWKEKK 225
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 54
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 55 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 157
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 158 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 212
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 213 DSCQEYSDWKEKK 225
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 54
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 55 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 157
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 158 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 212
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 213 DSCQEYSDWKEKK 225
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H +T A+KI L + KV K+ Q +
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKI----------LDKQKVVKLKQ-----------I 78
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + P E +F + RR +F
Sbjct: 79 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV-PGGE-MFSHLRRIGRFXEPH 135
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 189
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 190 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 239
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 240 YEKIVSGKVRFP 251
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +F+
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFAEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 54
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 55 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 157
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 158 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 212
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 213 DSCQEYSDWKEKK 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 46/237 (19%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+ +GR +G G FG ++LA I+A+K+ E G +H QL E ++ L+
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH-QLRREIEIQSHLRHP 74
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +R+ + D I+ L + F+ ++ +G
Sbjct: 75 NILRMYNYFHDRKRIY-LMLEFAPRGELYKELQKHG------------------------ 109
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+F + +++ + Y H R +HRDIKP+N LMG ++ I DFG +
Sbjct: 110 --RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY---KGELKIADFGWSV-- 162
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
H P + + GT Y G + DL G + FL G P+
Sbjct: 163 -------HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 52
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 53 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 100
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 101 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 155
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 156 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 210
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 211 DSCQEYSDWKEKK 223
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKK 224
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 46/237 (19%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+ +GR +G G FG ++LA I+A+K+ E G +H QL E ++ L+
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH-QLRREIEIQSHLRHP 75
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +R+ + D I+ L + F+ ++ +G
Sbjct: 76 NILRMYNYFHDRKRIY-LMLEFAPRGELYKELQKHG------------------------ 110
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+F + +++ + Y H R +HRDIKP+N LMG ++ I DFG +
Sbjct: 111 --RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY---KGELKIADFGWSV-- 163
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
H P + + GT Y G + DL G + FL G P+
Sbjct: 164 -------HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKK 224
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKK 224
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKK 224
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKK 224
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKK 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKK 224
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 106
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +F
Sbjct: 107 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPH 163
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 217
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 218 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 267
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 268 YEKIVSGKVRFP 279
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKK 224
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 80
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +F
Sbjct: 81 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPH 137
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 138 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 191
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 192 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 241
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 242 YEKIVSGKVRFP 253
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +F
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKK 224
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G++GE+ LA + T E VAVKI + + + I+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 54
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 55 ------------EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 103 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 157
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 158 NNRE---RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 212
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 213 DSCQEYSDWKEKK 225
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +F
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N ++ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLIID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + + ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIIISKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 101/238 (42%), Gaps = 43/238 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----QLLYEAKVYKILQGGSK 64
Y+L + IG G+F ++ LA HV T VAVKI + +P +L E ++ KIL +
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
++L VI T+ + Y GE V D L R
Sbjct: 77 VKLF-----EVIETEKTLYL---------VMEYASGGE----VFDYLVAHGRMKEKEARA 118
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
KF Q+++ ++Y H + +HRD+K +N L+ + I DFG + ++
Sbjct: 119 KFR---------QIVSAVQYCHQKYIVHRDLKAENLLLD---GDMNIKIADFGFSNEF-- 164
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQG 241
T + G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 165 -TVGNKL-----DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +F
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT Y + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 43/287 (14%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVV 69
+G++IGSGSFG ++ H D VAVK+ N PQ L + +K G V+
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQL---QAFKNEVG------VL 74
Query: 70 FHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLK 129
HV I ++F Y + ++ G SL KF +K
Sbjct: 75 RKTRHVNI----LLFMG----------YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMK 120
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 189
++ +A Q ++Y+H++ +HRD+K +N + + N V I DFGLA + +R
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATE-----KSR 172
Query: 190 HIPYRENKNLTGTARYASCNTHLGIEQSR----RDDLESLGYVLLYFLRGSLPWQGLKAA 245
+ + L+G+ + + + ++ S + D+ + G VL + G LP+ +
Sbjct: 173 WSGSHQFEQLSGSILWMAPEV-IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-- 229
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
+ Q + + +S + + + P C D+RP +
Sbjct: 230 NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 276
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 45/288 (15%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F + + L I+ +W G SL KF +
Sbjct: 84 LF-MGYSTAPQLAIV----------TQW-------------CEGSSLYHHLHASETKFEM 119
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
K ++ +A Q ++Y+H++ +HRD+K +N + + N V I DFGLA + +
Sbjct: 120 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATE-----KS 171
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSR----RDDLESLGYVLLYFLRGSLPWQGLKA 244
R + + L+G+ + + + ++ S + D+ + G VL + G LP+ +
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEV-IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN- 229
Query: 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
+ Q + + +S + + + P C D+RP +
Sbjct: 230 -NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 276
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 46/249 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG--TKHPQLLYEAKVYKILQGGSKIR 66
+++ R IG GSFG++ + DT ++ A+K N + ++ K +I+QG
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG----- 71
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGV-DGEDNVLVLDLLGPSLEDLFVYCRRK 125
++H + L WY D ED +V+DLL DL + ++
Sbjct: 72 -----LEHPFLVNL---------------WYSFQDEEDMFMVVDLLLGG--DLRYHLQQN 109
Query: 126 --FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
F +TV + +++ ++Y+ ++ +HRD+KPDN L+ + V+I DF +A
Sbjct: 110 VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD---EHGHVHITDFNIAAMLP 166
Query: 184 DPTTNRHIPYRENKNLTGTARYAS---CNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240
T + + GT Y + ++ G S D SLG LRG P+
Sbjct: 167 RET--------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
Query: 241 GLKAATKKQ 249
+ + K+
Sbjct: 219 IRSSTSSKE 227
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 43/287 (14%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVV 69
+G++IGSGSFG ++ H D VAVK+ N PQ L + +K G V+
Sbjct: 16 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQL---QAFKNEVG------VL 62
Query: 70 FHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLK 129
HV I ++F Y + ++ G SL KF +K
Sbjct: 63 RKTRHVNI----LLFMG----------YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMK 108
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 189
++ +A Q ++Y+H++ +HRD+K +N + + N V I DFGLA +R
Sbjct: 109 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLAT-----VKSR 160
Query: 190 HIPYRENKNLTGTARYASCNTHLGIEQSR----RDDLESLGYVLLYFLRGSLPWQGLKAA 245
+ + L+G+ + + + ++ S + D+ + G VL + G LP+ +
Sbjct: 161 WSGSHQFEQLSGSILWMAPEV-IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-- 217
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
+ Q + + +S + + + P C D+RP +
Sbjct: 218 NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF 264
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 34/183 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVA---VKIENSGTKHPQ-LLYEAKVYKILQGGS 63
KY+ KIG G++G +F A + +T+EIVA V++++ P L E + K L+ +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
+RL H ++H+ + LV + L+ F C
Sbjct: 63 IVRL------HDVLHS---------------------DKKLTLVFEFCDQDLKKYFDSCN 95
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+ V Q++ + + HSR LHRD+KP N L+ + ++ + +FGLA+ +
Sbjct: 96 GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFG 152
Query: 184 DPT 186
P
Sbjct: 153 IPV 155
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 51/244 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI---------ENSGTKHPQLLYEAKVYKI 58
+Y+ +K+GSG++GE+ L T A+KI NSG LL E V K
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA----LLDEVAVLK- 76
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLED 117
+DH I L F D + LV+++ G L D
Sbjct: 77 ------------QLDHPNIMKLYEFFE--------------DKRNYYLVMEVYRGGELFD 110
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ R+KFS ++ Q+++ Y+H +HRD+KP+N L+ + + I+DFG
Sbjct: 111 EII-LRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFG 169
Query: 178 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237
L+ + + K GTA Y + L + + D+ S G +L L G
Sbjct: 170 LSAHFEVGG--------KMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYP 220
Query: 238 PWQG 241
P+ G
Sbjct: 221 PFGG 224
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 41/266 (15%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGTKHPQLLYEAKVYKI 58
E+I ++L R +G G +G++F V +T +I A+K+ K ++ AK
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKV----LKKAMIVRNAKDTAH 67
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
+ R ++ V H I + +I++ GG K Y L+L+ L S +L
Sbjct: 68 TKAE---RNILEEVKHPFI--VDLIYAFQTGG----KLY--------LILEYL--SGGEL 108
Query: 119 FVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
F+ R+ F T ++ + ++H +G ++RD+KP+N ++ V + DF
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDF 165
Query: 177 GLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236
GL K+ T H GT Y + + +R D SLG ++ L G+
Sbjct: 166 GLCKESIHDGTVTH-------TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218
Query: 237 LPWQGLKAATKKQKYDKICEKKVSTP 262
P+ G +K+ DKI + K++ P
Sbjct: 219 PPFTG---ENRKKTIDKILKCKLNLP 241
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K+ ++ E K+ + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKN-KIKREIKILENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 137
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 138 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 26/179 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK---IENSGTKHP-QLLYEAKVYKILQGGS 63
KY+ KIG G+FGE+F A H T + VA+K +EN P L E K+ ++L+ +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
+ L+ I ++ G I LV D L L
Sbjct: 79 VVNLI------EICRTKASPYNRCKGSI-------------YLVFDFCEHDLAGLLSNVL 119
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF+L + + ++ + Y+H LHRD+K N L+ + + + DFGLA+ +
Sbjct: 120 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAF 175
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 112/282 (39%), Gaps = 70/282 (24%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----------------------K 45
KY L IG GS+G + +A T I A+KI N
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 46 HPQL--LYE--------AKVYKILQGGSKI-RLVVFHVDHVIIHALTIIFSSTLGGIPNI 94
HP + LYE V ++ GG + +L VF D A+ ++ + + P
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV-KTQICPCPEC 145
Query: 95 KWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRD 154
++G + + + +R+ K + + Q+ + + Y+H++G HRD
Sbjct: 146 NEEAINGSIH---------GFRESLDFVQRE---KLISNIMRQIFSALHYLHNQGICHRD 193
Query: 155 IKPDNFLMGLGRKANQVYIIDFGLAK--------KYRDPTTNRHIPY---RENKNLTGTA 203
IKP+NFL K+ ++ ++DFGL+K +Y TT PY E N T +
Sbjct: 194 IKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252
Query: 204 RYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
C D S G +L L G++P+ G+ A
Sbjct: 253 YGPKC------------DAWSAGVLLHLLLMGAVPFPGVNDA 282
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ +G+GSFG + L H ++ A+KI L + KV K+ Q +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKI----------LDKQKVVKLKQ-----------I 85
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR--KFSLKT 130
+H + + I+ + + +++ D + +V++ + ++F + RR +FS
Sbjct: 86 EHTL-NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPH 142
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A Q++ EY+HS ++RD+KP+N L+ + + + DFG AK+ + T
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKGRTW--- 196
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L GT + L ++ D +LG VL+Y + P A Q
Sbjct: 197 -------XLCGTPEALAPEIILSKGYNKAVDWWALG-VLIYEMAAGYP--PFFADQPIQI 246
Query: 251 YDKICEKKVSTP 262
Y+KI KV P
Sbjct: 247 YEKIVSGKVRFP 258
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 102/253 (40%), Gaps = 39/253 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ L + +G G+ GE+ LA + T E VAVKI + + + I+
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKI-------------VDMKRAVDCPENIKK- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I + L +K+YG E N+ L L S +LF +
Sbjct: 54 ------------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 129 KT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
Q++A + Y+H G HRDIKP+N L+ + + + I DFGLA +R
Sbjct: 102 PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFR--Y 156
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
NR R + GT Y + E + D+ S G VL L G LPW + +
Sbjct: 157 NNRE---RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD--QPS 211
Query: 246 TKKQKYDKICEKK 258
Q+Y EKK
Sbjct: 212 DSCQEYSDWKEKK 224
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 41/266 (15%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGTKHPQLLYEAKVYKI 58
E+I ++L R +G G +G++F V +T +I A+K+ K ++ AK
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKV----LKKAMIVRNAKDTAH 67
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
+ R ++ V H I + +I++ GG K Y L+L+ L S +L
Sbjct: 68 TKAE---RNILEEVKHPFI--VDLIYAFQTGG----KLY--------LILEYL--SGGEL 108
Query: 119 FVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
F+ R+ F T ++ + ++H +G ++RD+KP+N ++ V + DF
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDF 165
Query: 177 GLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236
GL K+ T H GT Y + + +R D SLG ++ L G+
Sbjct: 166 GLCKESIHDGTVTH-------XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218
Query: 237 LPWQGLKAATKKQKYDKICEKKVSTP 262
P+ G +K+ DKI + K++ P
Sbjct: 219 PPFTG---ENRKKTIDKILKCKLNLP 241
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 49/263 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVK------IENSGTKHPQLLYEAKVYKILQGG 62
+++GR +G G FG ++LA ++ IVA+K IE G +H QL E ++ L
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH-QLRREIEIQAHLHHP 83
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +RL + D I+ I Y GE ++L C
Sbjct: 84 NILRLYNYFYDRRRIYL--------------ILEYAPRGE-----------LYKELQKSC 118
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
F + + +++ + Y H + +HRDIKP+N L+G ++ I DFG +
Sbjct: 119 --TFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLG---LKGELKIADFGWSV-- 171
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
H P K + GT Y G + + DL +G + L G+ P++
Sbjct: 172 -------HAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE-- 222
Query: 243 KAATKKQKYDKICEKKVSTPIEV 265
+A+ + Y +I + + P V
Sbjct: 223 -SASHNETYRRIVKVDLKFPASV 244
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 43/238 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----QLLYEAKVYKILQGGSK 64
Y+L + IG G+F ++ LA H+ T VA+KI + +P +L E ++ KIL +
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
++L VI T+ I Y GE V D L R
Sbjct: 74 VKLF-----EVIETEKTLYL---------IMEYASGGE----VFDYLVAHGRMKEKEARS 115
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
KF Q+++ ++Y H + +HRD+K +N L+ + I DFG + ++
Sbjct: 116 KFR---------QIVSAVQYCHQKRIVHRDLKAENLLLDADM---NIKIADFGFSNEF-- 161
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQG 241
T + G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 162 -TVGGKL-----DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 51/244 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI---------ENSGTKHPQLLYEAKVYKI 58
+Y+ +K+GSG++GE+ L T A+KI NSG LL E V K
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA----LLDEVAVLK- 59
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLED 117
+DH I L F D + LV+++ G L D
Sbjct: 60 ------------QLDHPNIMKLYEFFE--------------DKRNYYLVMEVYRGGELFD 93
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ R+KFS ++ Q+++ Y+H +HRD+KP+N L+ + + I+DFG
Sbjct: 94 EIIL-RQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFG 152
Query: 178 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237
L+ + + K GTA Y + L + + D+ S G +L L G
Sbjct: 153 LSAHFEVGG--------KMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYP 203
Query: 238 PWQG 241
P+ G
Sbjct: 204 PFGG 207
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 26/179 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK---IENSGTKHP-QLLYEAKVYKILQGGS 63
KY+ KIG G+FGE+F A H T + VA+K +EN P L E K+ ++L+ +
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
+ L+ I ++ G I LV D L L
Sbjct: 78 VVNLI------EICRTKASPYNRCKGSI-------------YLVFDFCEHDLAGLLSNVL 118
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF+L + + ++ + Y+H LHRD+K N L+ + + + DFGLA+ +
Sbjct: 119 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAF 174
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 26/179 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK---IENSGTKHP-QLLYEAKVYKILQGGS 63
KY+ KIG G+FGE+F A H T + VA+K +EN P L E K+ ++L+ +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
+ L+ I ++ G I LV D L L
Sbjct: 79 VVNLI------EICRTKASPYNRCKGSI-------------YLVFDFCEHDLAGLLSNVL 119
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF+L + + ++ + Y+H LHRD+K N L+ + + + DFGLA+ +
Sbjct: 120 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAF 175
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ I + + +L LD L + + L
Sbjct: 80 AVVSEEPIYIVIEYMSKGSL-------------------LDFLKGEM-------GKYLRL 113
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D N
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED---N 167
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 220
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 221 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 122/299 (40%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 328
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V I+ +T S G L+ L + L
Sbjct: 329 AV-VSEEPIYIVTEYMSK-------------------------GSLLDFLKGETGKYLRL 362
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTT 187
++ +A Q+ + + YV ++HRD++ N L+G N V + DFGLA+ D
Sbjct: 363 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG----ENLVCKVADFGLARLIED--- 415
Query: 188 NRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAA 245
N + + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 416 NEYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM--- 468
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 469 VNREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 41/235 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVY-KILQGGSKIRL 67
Y++ + +G GSFG++ LA H T + VA+KI N ++L ++ + +I + S +RL
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-----KVLAKSDMQGRIEREISYLRL 60
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGV--DGEDNVLVLDLLGPSLEDLFVYCRRK 125
+ H+I K Y V ++ ++V++ G L D ++ R K
Sbjct: 61 L--RHPHII------------------KLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDK 99
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
S + Q+I+ +EY H +HRD+KP+N L+ + V I DFGL+ D
Sbjct: 100 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDG 156
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239
K G+ YA+ G + D+ S G +L L LP+
Sbjct: 157 NF--------LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 41/235 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVY-KILQGGSKIRL 67
Y++ + +G GSFG++ LA H T + VA+KI N ++L ++ + +I + S +RL
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-----KVLAKSDMQGRIEREISYLRL 70
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGV--DGEDNVLVLDLLGPSLEDLFVYCRRK 125
H+I K Y V ++ ++V++ G L D ++ R K
Sbjct: 71 --LRHPHII------------------KLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDK 109
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
S + Q+I+ +EY H +HRD+KP+N L+ + V I DFGL+ D
Sbjct: 110 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDG 166
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239
K G+ YA+ G + D+ S G +L L LP+
Sbjct: 167 NF--------LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 213
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 41/235 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVY-KILQGGSKIRL 67
Y++ + +G GSFG++ LA H T + VA+KI N ++L ++ + +I + S +RL
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-----KVLAKSDMQGRIEREISYLRL 69
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGV--DGEDNVLVLDLLGPSLEDLFVYCRRK 125
H+I K Y V ++ ++V++ G L D ++ R K
Sbjct: 70 --LRHPHII------------------KLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDK 108
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
S + Q+I+ +EY H +HRD+KP+N L+ + V I DFGL+ D
Sbjct: 109 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDG 165
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239
K G+ YA+ G + D+ S G +L L LP+
Sbjct: 166 NF--------LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 121/299 (40%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ I + + L LD L + + L
Sbjct: 80 AVVSEEPIYIVMEYMSKGCL-------------------LDFLKGEM-------GKYLRL 113
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTT 187
++ +A Q+ + + YV ++HRD++ N L+G N V + DFGLA+ D
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG----ENLVCKVADFGLARLIED--- 166
Query: 188 NRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAA 245
N + + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 167 NEYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM--- 219
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 220 VNREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V I+ +T S +LD L + + L
Sbjct: 80 AV-VSEEPIYIVTEYMSKGC------------------LLDFLKGEM-------GKYLRL 113
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D N
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED---N 167
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 220
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 221 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 41/235 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVY-KILQGGSKIRL 67
Y++ + +G GSFG++ LA H T + VA+KI N ++L ++ + +I + S +RL
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-----KVLAKSDMQGRIEREISYLRL 64
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGV--DGEDNVLVLDLLGPSLEDLFVYCRRK 125
+ H+I K Y V ++ ++V++ G L D ++ R K
Sbjct: 65 L--RHPHII------------------KLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDK 103
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
S + Q+I+ +EY H +HRD+KP+N L+ + V I DFGL+ D
Sbjct: 104 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDG 160
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239
K G+ YA+ G + D+ S G +L L LP+
Sbjct: 161 NF--------LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 207
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y LG +G G+FG++ + H T VAVKI N K L K+ + +Q L
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNR-QKIRSLDVVGKIRREIQN-----LK 71
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-CRR-KF 126
+F H+I I ST I + Y GE LF Y C+ +
Sbjct: 72 LFRHPHIIKLYQVI---STPSDIFMVMEYVSGGE---------------LFDYICKNGRL 113
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
K L Q+++ ++Y H +HRD+KP+N L+ A I DFGL+ D
Sbjct: 114 DEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAK---IADFGLSNMMSDGE 170
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
R G+ YA+ G + D+ S G +L L G+LP+
Sbjct: 171 FLR--------XSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP 222
Query: 246 TKKQKYDKICEKKVSTP 262
T + KIC+ TP
Sbjct: 223 T---LFKKICDGIFYTP 236
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 43/238 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----QLLYEAKVYKILQGGSK 64
Y+L + IG G+F ++ LA H+ T VA+KI + +P +L E ++ KIL +
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
++L VI T+ I Y GE V D L R
Sbjct: 77 VKLF-----EVIETEKTLYL---------IMEYASGGE----VFDYLVAHGRMKEKEARS 118
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
KF Q+++ ++Y H + +HRD+K +N L+ + I DFG + ++
Sbjct: 119 KFR---------QIVSAVQYCHQKRIVHRDLKAENLLLDADM---NIKIADFGFSNEF-- 164
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQG 241
T + G YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 165 -TVGGKL-----DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 46/237 (19%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI------ENSGTKHPQLLYEAKVYKILQGG 62
+ + R +G G FG ++LA I+A+K+ E G +H QL E ++ L+
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH-QLRREIEIQSHLRHP 74
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+ +R+ + D I+ L + F+ ++ +G
Sbjct: 75 NILRMYNYFHDRKRIY-LMLEFAPRGELYKELQKHG------------------------ 109
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+F + +++ + Y H R +HRDIKP+N LMG ++ I DFG +
Sbjct: 110 --RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY---KGELKIADFGWSV-- 162
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
H P + + GT Y G + DL G + FL G P+
Sbjct: 163 -------HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 119/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ I + +L LD L + + L
Sbjct: 80 AVVSEEPIYIVCEYMSKGSL-------------------LDFLKGEM-------GKYLRL 113
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D N
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED---N 167
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 220
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 221 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 95/255 (37%), Gaps = 48/255 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGSK 64
Y + ++G G+F + H T A KI N S +L EA++ + LQ +
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYC 122
+RL H I + + LV DL+ G ED+
Sbjct: 68 VRL------HDSIQEESFHY---------------------LVFDLVTGGELFEDIVA-- 98
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +S Q++ I Y HS G +HR++KP+N L+ K V + DFGLA +
Sbjct: 99 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP-WQG 241
D GT Y S S+ D+ + G +L L G P W
Sbjct: 159 NDSEAWH--------GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
Query: 242 ----LKAATKKQKYD 252
L A K YD
Sbjct: 211 DQHRLYAQIKAGAYD 225
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 95/255 (37%), Gaps = 48/255 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGSK 64
Y + ++G G+F + H T A KI N S +L EA++ + LQ +
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 66
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYC 122
+RL H I + + LV DL+ G ED+
Sbjct: 67 VRL------HDSIQEESFHY---------------------LVFDLVTGGELFEDIVA-- 97
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +S Q++ I Y HS G +HR++KP+N L+ K V + DFGLA +
Sbjct: 98 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 157
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP-WQG 241
D GT Y S S+ D+ + G +L L G P W
Sbjct: 158 NDSEAWH--------GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 209
Query: 242 ----LKAATKKQKYD 252
L A K YD
Sbjct: 210 DQHRLYAQIKAGAYD 224
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 95/255 (37%), Gaps = 48/255 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGSK 64
Y + ++G G+F + H T A KI N S +L EA++ + LQ +
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYC 122
+RL H I + + LV DL+ G ED+
Sbjct: 68 VRL------HDSIQEESFHY---------------------LVFDLVTGGELFEDIVA-- 98
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +S Q++ I Y HS G +HR++KP+N L+ K V + DFGLA +
Sbjct: 99 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP-WQG 241
D GT Y S S+ D+ + G +L L G P W
Sbjct: 159 NDSEAWH--------GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
Query: 242 ----LKAATKKQKYD 252
L A K YD
Sbjct: 211 DQHRLYAQIKAGAYD 225
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 119/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ I + + +L LD L + + L
Sbjct: 80 AVVSEEPIYIVIEYMSKGSL-------------------LDFLKGEM-------GKYLRL 113
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D N
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED---N 167
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 168 EXTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 220
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 221 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 121/299 (40%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ I + +L LD L + + L
Sbjct: 80 AVVSEEPIYIVTEYMSKGSL-------------------LDFLKGEM-------GKYLRL 113
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTT 187
++ +A Q+ + + YV ++HRD++ N L+G N V + DFGLA+ D
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG----ENLVCKVADFGLARLIED--- 166
Query: 188 NRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAA 245
N + + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 167 NEYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM--- 219
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 220 VNREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 14 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 72
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V I+ +T S G L+ L + L
Sbjct: 73 AV-VSEEPIYIVTEYMSK-------------------------GSLLDFLKGETGKYLRL 106
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D N
Sbjct: 107 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED---N 160
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 161 EYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 213
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 214 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 267
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 22/175 (12%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
R +GSG++G + A + VAVK L++ + Y+ L+ ++ H+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELR-------LLKHL 84
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
H + L +F+ +I+ D + LV L+G L ++ V C+ S + V
Sbjct: 85 KHENVIGLLDVFTPA----TSIE----DFSEVYLVTTLMGADLNNI-VKCQ-ALSDEHVQ 134
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
L Q++ ++Y+HS G +HRD+KP N + + +++ I+DFGLA++ + T
Sbjct: 135 FLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDSELRILDFGLARQADEEMT 186
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V I+ +T S G L+ L + L
Sbjct: 246 AV-VSEEPIYIVTEYMSK-------------------------GSLLDFLKGETGKYLRL 279
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D N
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED---N 333
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 334 EYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 386
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 387 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 119/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 10 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 68
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ I + +L LD L + + L
Sbjct: 69 AVVSEEPIYIVTEYMSKGSL-------------------LDFLKGEM-------GKYLRL 102
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D N
Sbjct: 103 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED---N 156
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 157 EYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 209
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 210 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 263
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V I+ +T S G L+ L + L
Sbjct: 246 AV-VSEEPIYIVTEYMSK-------------------------GSLLDFLKGETGKYLRL 279
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D N
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED---N 333
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 334 EYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 386
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 387 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 119/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 12 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 70
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ I + +L LD L + + L
Sbjct: 71 AVVSEEPIYIVTEYMSKGSL-------------------LDFLKGEM-------GKYLRL 104
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D N
Sbjct: 105 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED---N 158
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 159 EYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 211
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 212 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 265
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 51/300 (17%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K KIR
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMK------KIR-- 71
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYCRRKF 126
H V ++A+ V E +V + + G L+ L +
Sbjct: 72 --HEKLVQLYAV------------------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYL 111
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
L ++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D
Sbjct: 112 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED-- 166
Query: 187 TNRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKA 244
N + + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 167 -NEYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM-- 219
Query: 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 220 -VNREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 90/237 (37%), Gaps = 43/237 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGSK 64
Y + ++G G+F + H T A KI N S +L EA++ + LQ +
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYC 122
+RL H I + + LV DL+ G ED +
Sbjct: 91 VRL------HDSIQEESFHY---------------------LVFDLVTGGELFED--IVA 121
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +S Q++ I Y HS G +HR++KP+N L+ K V + DFGLA +
Sbjct: 122 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
D GT Y S S+ D+ + G +L L G P+
Sbjct: 182 NDSEAWH--------GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 25 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 75
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 125
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + +++ I+DFGLA+ D T
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLARHTDDEMT 182
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 183 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 228
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 229 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 272
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 29 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 79
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 129
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + +++ I+DFGLA+ D T
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLARHTDDEMT 186
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 187 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 232
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 233 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 276
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDD--- 177
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
E T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 178 -------EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 9 YKLGRKI-GSGSFGEIFLASHVDTNEIVAVKI--ENSGTKHPQLLYEAKVYKILQGGSKI 65
YKL ++ G G++ ++ A + + AVKI + +G ++ E + QG I
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNI 73
Query: 66 -RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
L+ F D + ++F GG ++L + ++
Sbjct: 74 LELIEFFEDDTRFY---LVFEKLQGG-------------SILA-----------HIQKQK 106
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
F+ + + + A ++++H++G HRD+KP+N L K + V I DF L +
Sbjct: 107 HFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKL 166
Query: 185 PTTNRHIPYRENKNLTGTARYASCN-----THLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ I E G+A Y + T +R DL SLG VL L G P+
Sbjct: 167 NNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
Query: 240 QGLKAAT---KKQKYDKICEKKVSTPIE 264
G A + + ++C+ K+ I+
Sbjct: 227 VGHCGADCGWDRGEVCRVCQNKLFESIQ 254
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 128/289 (44%), Gaps = 48/289 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 59
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ + P ++DLF + +
Sbjct: 60 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERMEP-VQDLFDFITERG 109
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 110 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 167
Query: 185 PTTNRHIPYRENKNLTGTARYASCN-THLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243
+ GT Y+ R + SLG +L + G +P++ +
Sbjct: 168 TVYT---------DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
+ Q + + ++VS+ + L + +C +L RP +
Sbjct: 219 EIIRGQVFFR---QRVSSECQHLIR-----------WCLALRPSDRPTF 253
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ IGSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 28 RYQNLSPIGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 78
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 128
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHTDDEMT 185
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 186 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 231
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 232 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 275
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 53/301 (17%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL- 244
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL---GPSLEDLFVYCRRK 125
Y V E+ + ++ G L+ L +
Sbjct: 245 ----------------------------YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKY 276
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
L ++ +A Q+ + + YV ++HRD++ N L+G + DFGLA+ D
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED- 332
Query: 186 TTNRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLK 243
N + + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 333 --NEYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM- 385
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303
++ D++ E+ P C P C ++RP + +L+ D F
Sbjct: 386 --VNREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439
Query: 304 S 304
+
Sbjct: 440 T 440
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
RR F+ ++ + + ++++H++G HRD+KP+N L + + V I DFGL
Sbjct: 105 RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGI 164
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS-----RRDDLESLGYVLLYFLRGSL 237
+ I E G+A Y + + +R DL SLG +L L G
Sbjct: 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
Query: 238 PWQG 241
P+ G
Sbjct: 225 PFVG 228
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 44/257 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHI-PYRENKNLTGTARYASCNTHLGIEQSRRD 220
+ + + I+DFGLA R TN + PY T Y + LG+ +
Sbjct: 159 V---KSDCTLKILDFGLA---RTACTNFMMTPY------VVTRYYRAPEVILGMGYAANV 206
Query: 221 DLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHY 280
D+ S+G ++ ++G + +QG +++K+ E ++ TP AEF +
Sbjct: 207 DIWSVGCIMGELVKGCVIFQG---TDHIDQWNKVIE-QLGTP--------SAEFMAALQP 254
Query: 281 CQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLLPASRVTN 340
+ RP Y +K F +LF DW + K K+ +R
Sbjct: 255 TVRNYVENRPKYPGIK--FEELFP----------DWIFPSESERDKIKTSQ----ARDLL 298
Query: 341 SRVMPMRTDKLKGVNDA 357
S+++ + DK V++A
Sbjct: 299 SKMLVIDPDKRISVDEA 315
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 43/238 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI----ENSGTKHPQLLYEAKVYKILQGGSK 64
Y+L + IG G+F ++ LA H+ T + VAVKI + + + +L E ++ K+L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
++L VI T+ + Y GE V D L R
Sbjct: 76 VKLF-----EVIETEKTLYL---------VXEYASGGE----VFDYLVAHGRXKEKEARA 117
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
KF Q+++ ++Y H + +HRD+K +N L+ + I DFG + ++
Sbjct: 118 KFR---------QIVSAVQYCHQKFIVHRDLKAENLLLD---ADXNIKIADFGFSNEF-- 163
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQG 241
T + G YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 164 -TFGNKL-----DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y + +G GSFG++ LA+H T + VA+K + QLL ++ ++ ++ +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISR-----QLLKKSDMHMRVEREISYLKL 65
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ H II +I + T D V+V++ G L D ++ +++ +
Sbjct: 66 LRHPH--IIKLYDVITTPT---------------DIVMVIEYAGGELFD-YIVEKKRMTE 107
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
Q+I IEY H +HRD+KP+N L+ V I DFGL+ D
Sbjct: 108 DEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNLNVKIADFGLSNIMTDGNF- 163
Query: 189 RHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239
K G+ YA+ G + D+ S G VL L G LP+
Sbjct: 164 -------LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 44/257 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 100 QDVYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 156
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHI-PYRENKNLTGTARYASCNTHLGIEQSRRD 220
+ + + I+DFGLA R +TN + PY T Y + LG+
Sbjct: 157 V---KSDCTLKILDFGLA---RTASTNFMMTPY------VVTRYYRAPEVILGMGYKENV 204
Query: 221 DLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHY 280
D+ S+G ++ ++GS+ +QG +++K+ E ++ TP AEF +
Sbjct: 205 DIWSVGCIMGELVKGSVIFQG---TDHIDQWNKVIE-QLGTP--------SAEFMAALQP 252
Query: 281 CQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLLPASRVTN 340
+ RP Y + F +LF DW + K K+ +R
Sbjct: 253 TVRNYVENRPAYPGIA--FEELFP----------DWIFPSESERDKIKTSQ----ARDLL 296
Query: 341 SRVMPMRTDKLKGVNDA 357
S+++ + DK V++A
Sbjct: 297 SKMLVIDPDKRISVDEA 313
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 43/245 (17%)
Query: 15 IGSGSFGEIFLASHVDTNEIVAVKI--ENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+GSG+F E+FL T ++ A+K ++ + L E V K +
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLK-------------KI 63
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTV 131
H I L I+ ST +Y LV+ L+ G L D + R ++ K
Sbjct: 64 KHENIVTLEDIYEST------THYY--------LVMQLVSGGELFDRILE-RGVYTEKDA 108
Query: 132 LMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 191
++ Q+++ ++Y+H G +HRD+KP+N L + +++ I DFGL+K ++ +
Sbjct: 109 SLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS--- 165
Query: 192 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKY 251
GT Y + S+ D S+G + L G P+ T+ + +
Sbjct: 166 ------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY---EETESKLF 216
Query: 252 DKICE 256
+KI E
Sbjct: 217 EKIKE 221
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 34 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 84
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 85 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 134
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 135 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHTDDEMT 191
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 192 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 237
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 238 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 281
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 26/179 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK---IENSGTKHP-QLLYEAKVYKILQGGS 63
KY+ KIG G+FGE+F A H T + VA+K +EN P L E K+ ++L+ +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
+ L+ I ++ I LV D L L
Sbjct: 79 VVNLI------EICRTKASPYNRCKASI-------------YLVFDFCEHDLAGLLSNVL 119
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
KF+L + + ++ + Y+H LHRD+K N L+ + + + DFGLA+ +
Sbjct: 120 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAF 175
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 18/188 (9%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLY-EAKVYKILQGGSKI 65
+Y L RK+G G F ++LA + N VA+KI + + E K+ + +
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF-VYCRR 124
+ +H+ L + + G +G V+V ++LG +L L Y R
Sbjct: 79 KEDSMGANHI------------LKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR 126
Query: 125 KFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKAN---QVYIIDFGLAK 180
L V ++ Q++ ++Y+H R G +H DIKP+N LM + Q+ I D G A
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 186
Query: 181 KYRDPTTN 188
Y + TN
Sbjct: 187 WYDEHYTN 194
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI----ENSGTKHPQLLYEAKVYKILQGGSK 64
Y+L + IG G+F ++ LA H+ T + VAVKI + + + +L E ++ K+L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
++L VI T+ + Y GE V D L R
Sbjct: 76 VKLF-----EVIETEKTLYL---------VMEYASGGE----VFDYLVAHGRMKEKEARA 117
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
KF Q+++ ++Y H + +HRD+K +N L+ + I DFG + ++
Sbjct: 118 KFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEF-- 163
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQG 241
T + G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 164 -TFGNKL-----DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI----ENSGTKHPQLLYEAKVYKILQGGSK 64
Y+L + IG G+F ++ LA H+ T + VAVKI + + + +L E ++ K+L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
++L VI T+ + Y GE V D L R
Sbjct: 76 VKLF-----EVIETEKTLYL---------VMEYASGGE----VFDYLVAHGRMKEKEARA 117
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
KF Q+++ ++Y H + +HRD+K +N L+ + I DFG + ++
Sbjct: 118 KFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEF-- 163
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQG 241
T + G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 164 -TFGNKL-----DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 18/188 (9%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLY-EAKVYKILQGGSKI 65
+Y L RK+G G F ++LA + N VA+KI + + E K+ + +
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF-VYCRR 124
+ +H+ L + + G +G V+V ++LG +L L Y R
Sbjct: 79 KEDSMGANHI------------LKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR 126
Query: 125 KFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKAN---QVYIIDFGLAK 180
L V ++ Q++ ++Y+H R G +H DIKP+N LM + Q+ I D G A
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 186
Query: 181 KYRDPTTN 188
Y + TN
Sbjct: 187 WYDEHYTN 194
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 118/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ I + +L LD L + + L
Sbjct: 80 AVVSEEPIYIVTEYMSKGSL-------------------LDFLKGEM-------GKYLRL 113
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD+ N L+G + DFGLA+ D N
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCK---VADFGLARLIED---N 167
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 220
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 221 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 22/175 (12%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
R +GSG++G + A + VAVK L++ + Y+ L+ ++ H+
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELR-------LLKHL 76
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
H + L +F+ +I+ D + LV L+G L ++ V C+ S + V
Sbjct: 77 KHENVIGLLDVFTPAT----SIE----DFSEVYLVTTLMGADLNNI-VKCQ-ALSDEHVQ 126
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
L Q++ ++Y+HS G +HRD+KP N + + ++ I+DFGLA++ + T
Sbjct: 127 FLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFGLARQADEEMT 178
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 28 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 78
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 128
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHTDDEMT 185
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 186 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 231
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 232 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 275
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 122/302 (40%), Gaps = 55/302 (18%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 11 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL- 68
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL---GPSLEDLFVYCRRK 125
Y V E+ + ++ G L+ L +
Sbjct: 69 ----------------------------YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKY 100
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRD 184
L ++ +A Q+ + + YV ++HRD++ N L+G N V + DFGLA+ D
Sbjct: 101 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG----ENLVCKVADFGLARLIED 156
Query: 185 PTTNRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGL 242
N + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 157 ---NEXTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM 209
Query: 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302
++ D++ E+ P C P C ++RP + +L+ D
Sbjct: 210 ---VNREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 262
Query: 303 FS 304
F+
Sbjct: 263 FT 264
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 GX----------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 42 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 92
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 93 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 142
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 143 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 199
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 200 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 245
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 246 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 289
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 43 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 93
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 143
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 144 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 200
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 201 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 246
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 247 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 290
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 35 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSKPFQSIIHAKRTYRELR------- 85
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 135
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 192
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 193 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 238
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 239 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 282
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 43/213 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK---IENSGTKHP-QLLYEAKVYKILQGGS 63
+Y+ K+G G++GE++ A TNE VA+K +E+ P + E + K LQ +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 64 KIRL--VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY 121
I L V+ H H L +IF ++K Y +D +V
Sbjct: 95 IIELKSVIHHN-----HRLHLIFEYAEN---DLKKY-MDKNPDV---------------- 129
Query: 122 CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQ--VYIIDFGLA 179
S++ + Q+I + + HSR LHRD+KP N L+ + + + I DFGLA
Sbjct: 130 -----SMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
Query: 180 KKYRDPT---TNRHIP--YRENKNLTGTARYAS 207
+ + P T+ I YR + L G+ Y++
Sbjct: 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYST 217
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHL-GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 46 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 96
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 146
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 147 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 203
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 204 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 249
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 250 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 293
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 74
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 75 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 124
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 125 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 182
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 25 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 75
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 125
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 182
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 183 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 228
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 229 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 272
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 35 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 85
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 135
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 192
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 193 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 238
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 239 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 282
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 35 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 85
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 135
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 192
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 193 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 238
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 239 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 282
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 30 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 80
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 130
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTADEMT 187
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 188 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 233
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 234 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 277
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 25 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 75
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 125
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 182
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 183 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 228
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 229 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 272
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 25 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 75
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 125
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 182
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 183 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 228
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 229 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 272
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 30 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 80
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 130
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTADEMT 187
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 188 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 233
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 234 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 277
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 29 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 79
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 129
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 186
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 187 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 232
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 233 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 276
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 75
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 76 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 125
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 183
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 34 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 84
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 85 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 134
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 135 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 191
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 192 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 237
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 238 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 281
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 29 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 79
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 129
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 186
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 187 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 232
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 233 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 276
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 87
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 88 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 137
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 195
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 20 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 70
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 120
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 121 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 177
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 178 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 223
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 224 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 267
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 21 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 71
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 72 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 121
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 122 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 178
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 179 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 224
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 225 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 268
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 74
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 75 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 124
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 125 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 182
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 35/178 (19%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGS 63
+Y+L ++G G+F + + T + A KI N S H +L EA++ ++L+ +
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVY 121
+RL H I + LV DL+ G ED +
Sbjct: 65 IVRL------HDSISEEGFHY---------------------LVFDLVTGGELFED--IV 95
Query: 122 CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
R +S Q++ + + H G +HRD+KP+N L+ K V + DFGLA
Sbjct: 96 AREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 40/184 (21%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS--- 63
V Y + IG+GSFG ++ A D+ E+VA+K K+LQG +
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------------------KVLQGKAFKN 61
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV 120
+ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRVAR 110
Query: 121 -YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFG 168
Query: 178 LAKK 181
AK+
Sbjct: 169 SAKQ 172
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 40/184 (21%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS--- 63
V Y + IG+GSFG ++ A D+ E+VA+K K+LQG +
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------------------KVLQGKAFKN 61
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV 120
+ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPATVYRVAR 110
Query: 121 -YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFG 168
Query: 178 LAKK 181
AK+
Sbjct: 169 SAKQ 172
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 90 GIPNI-KWYGV--DGEDNVLVLDLLGPSLEDLFVYCRRK--FSLKTVLMLADQMIARIEY 144
G PNI K + V D LV++LL +LF ++K FS + ++++ + +
Sbjct: 64 GHPNIVKLHEVFHDQLHTFLVMELLNGG--ELFERIKKKKHFSETEASYIMRKLVSAVSH 121
Query: 145 VHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTAR 204
+H G +HRD+KP+N L ++ IIDFG A+ P N+ + K T
Sbjct: 122 MHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR--LKPPDNQPL-----KTPCFTLH 174
Query: 205 YASCNTHLGIEQSRRD---DLESLGYVLLYFLRGSLPWQ 240
YA+ + Q+ D DL SLG +L L G +P+Q
Sbjct: 175 YAAPEL---LNQNGYDESCDLWSLGVILYTMLSGQVPFQ 210
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 30 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 80
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 130
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTADEMT 187
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 188 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 233
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 234 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 277
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 75
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 76 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 125
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 183
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 28 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 78
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 128
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 185
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 186 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 231
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 232 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 275
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 19 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 69
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 119
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 176
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 177 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 222
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 223 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 266
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 40/184 (21%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS--- 63
V Y + IG+GSFG ++ A D+ E+VA+K K+LQG +
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------------------KVLQGKAFKN 61
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV 120
+ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRVAR 110
Query: 121 -YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFG 168
Query: 178 LAKK 181
AK+
Sbjct: 169 SAKQ 172
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 28 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 78
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 128
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 185
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 186 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 231
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 232 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 275
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 22 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 72
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 73 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 122
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 123 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 179
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 180 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 225
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 226 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 269
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 88
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 89 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 138
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 196
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 30 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 80
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 130
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 187
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 188 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 233
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 234 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 277
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 46 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 96
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 146
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D
Sbjct: 147 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDD--- 200
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
E T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 201 -------EMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 249
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 250 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 88
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 89 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 138
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 196
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 75
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 76 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 125
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 183
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 20 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 70
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 120
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 121 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 177
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 178 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 223
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 224 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 267
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 102
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 103 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 152
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 210
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 87
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 88 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 137
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 195
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 88
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 89 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 138
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 196
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 88
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 89 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 138
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 196
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 87
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 88 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 137
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 195
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 107
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 108 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 157
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 158 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 121/301 (40%), Gaps = 53/301 (17%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL- 75
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL---GPSLEDLFVYCRRK 125
Y V E+ + ++ G L+ L +
Sbjct: 76 ----------------------------YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKY 107
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
L ++ ++ Q+ + + YV ++HRD++ N L+G + DFGLA+ D
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED- 163
Query: 186 TTNRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLK 243
N + + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 164 --NEYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM- 216
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303
++ D++ E+ P C P C ++RP + +L+ D F
Sbjct: 217 --VNREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 270
Query: 304 S 304
+
Sbjct: 271 T 271
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 22/175 (12%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
R +GSG++G + A + VAVK L++ + Y+ L+ ++ H+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELR-------LLKHL 84
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
H + L +F+ +I+ D + LV L+G L + + + S + V
Sbjct: 85 KHENVIGLLDVFTPA----TSIE----DFSEVYLVTTLMGADLNN--IVKSQALSDEHVQ 134
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
L Q++ ++Y+HS G +HRD+KP N + + +++ I+DFGLA++ + T
Sbjct: 135 FLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDSELRILDFGLARQADEEMT 186
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 60
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 61 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 110
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 168
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 94
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 95 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 144
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 145 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 202
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 69
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 119
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDD--- 173
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
E T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 174 -------EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 222
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSL Q P F
Sbjct: 223 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLA--QMPKMNF 266
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 87
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 88 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 137
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 195
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 102
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 103 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 152
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 210
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 48/289 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 59
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 60 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 109
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 110 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 167
Query: 185 PTTNRHIPYRENKNLTGTARYASCN-THLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243
+ GT Y+ R + SLG +L + G +P++ +
Sbjct: 168 TVYT---------DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
+ Q + + ++VS+ + L + +C +L RP +
Sbjct: 219 EIIRGQVFFR---QRVSSECQHLIR-----------WCLALRPSDRPTF 253
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 60
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 61 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 110
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 168
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 48/289 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 60
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 61 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 110
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 168
Query: 185 PTTNRHIPYRENKNLTGTARYASCN-THLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243
+ GT Y+ R + SLG +L + G +P++ +
Sbjct: 169 TVYT---------DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
+ Q + + ++VS+ + L + +C +L RP +
Sbjct: 220 EIIRGQVFFR---QRVSSECQHLIR-----------WCLALRPSDRPTF 254
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 43/238 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI----ENSGTKHPQLLYEAKVYKILQGGSK 64
Y+L + IG G+F ++ LA H+ T + VAVKI + + + +L E ++ K+L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
++L VI T+ + Y GE V D L R
Sbjct: 76 VKLF-----EVIETEKTLYL---------VMEYASGGE----VFDYLVAHGRMKEKEARA 117
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
KF Q+++ ++Y H + +HRD+K +N L+ + I DFG + ++
Sbjct: 118 KFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEF-- 163
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQG 241
T + G YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 164 -TFGNKL-----DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI----ENSGTKHPQLLYEAKVYKILQGGSK 64
Y+L + IG G+F ++ LA H+ T + VAV+I + + + +L E ++ K+L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
++L VI T+ + Y GE V D L R
Sbjct: 76 VKLF-----EVIETEKTLYL---------VMEYASGGE----VFDYLVAHGRMKEKEARA 117
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
KF Q+++ ++Y H + +HRD+K +N L+ + I DFG + ++
Sbjct: 118 KFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEF-- 163
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQG 241
T + G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 164 -TFGNKL-----DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDD--- 177
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
E T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 178 -------EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSL Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLA--QMPKMNF 270
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI----ENSGTKHPQLLYEAKVYKILQGGSK 64
Y+L + IG G+F ++ LA H+ T + VAV+I + + + +L E ++ K+L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
++L VI T+ + Y GE V D L R
Sbjct: 76 VKLF-----EVIETEKTLYL---------VMEYASGGE----VFDYLVAHGRMKEKEARA 117
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
KF Q+++ ++Y H + +HRD+K +N L+ + I DFG + ++
Sbjct: 118 KFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEF-- 163
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQG 241
T + G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 164 -TFGNKL-----DEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 93
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 143
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 144 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 200
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 201 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 246
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSL Q P F
Sbjct: 247 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLA--QMPKMNF 290
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 92
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 93 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 142
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 143 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 199
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 200 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 245
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSL Q P F
Sbjct: 246 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLA--QMPKMNF 289
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 55
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 56 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 105
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 163
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 40/236 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+L + IGSG+FG L +NE+VAVK G K A V + + +R
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK-----IAANVKREIINHRSLR- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF--VYCRRK 125
H + I+ +I + T I + Y GE LF + +
Sbjct: 74 ---HPN--IVRFKEVILTPTHLAI--VMEYASGGE---------------LFERICNAGR 111
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
FS Q+I+ + Y H+ HRD+K +N L+ G A ++ I DFG +K
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD-GSPAPRLKICDFGYSKS---- 166
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQ 240
+ + + K+ GT Y + L E + D+ S G L L G+ P++
Sbjct: 167 ----SVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 114/309 (36%), Gaps = 65/309 (21%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQL----LYEAKVYKILQGGSKIR 66
LG +IG G+FGE+F N +VAVK T P L L EA++ K + +R
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVK-SCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR-- 124
L+ I+ I+ GG D + R
Sbjct: 177 LIGVCTQKQPIY---IVMELVQGG--------------------------DFLTFLRTEG 207
Query: 125 -KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+ +KT+L + A +EY+ S+ +HRD+ N L+ + N + I DFG++++
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEA 264
Query: 184 DPTTN-----RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLL-YFLRGS 236
D R +P + RY+S D+ S G +L F G+
Sbjct: 265 DGVXAASGGLRQVPVKWTAPEALNYGRYSS-----------ESDVWSFGILLWETFSLGA 313
Query: 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296
P+ L Q+ + EK P LC P C + QRP + +
Sbjct: 314 SPYPNL----SNQQTREFVEKGGRLPCPELC---PDAVFRLMEQCWAYEPGQRPSFSTIY 366
Query: 297 RLFHDLFSR 305
+ + R
Sbjct: 367 QELQSIRKR 375
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 116/299 (38%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 24 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 82
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 83 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 116
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D
Sbjct: 117 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---- 169
Query: 189 RHIPYRENKN--LTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAA 245
RE + TA A I + D+ S G +L + G +P+ G+
Sbjct: 170 NEXTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNP 225
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ V + P E C + RP + +L+ + D F+
Sbjct: 226 EVIQNLERGYRM-------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 277
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 41/229 (17%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GSFGE+F T ++VA+KI + ++ + +L + ++
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
++ L II GG LDLL P D + + T+L
Sbjct: 88 SYLKDTKLWIIMEYLGGGS---------------ALDLLEPGPLD-------ETQIATIL 125
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
+++ ++Y+HS +HRDIK N L+ + +V + DFG+A + D R+
Sbjct: 126 R---EILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRN-- 177
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRD---DLESLGYVLLYFLRGSLP 238
GT + + I+QS D D+ SLG + RG P
Sbjct: 178 -----XFVGTPFWMAPEV---IKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 35/178 (19%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGS 63
+Y+L ++G G+F + + T + A KI N S H +L EA++ ++L+ +
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVY 121
+RL H I + LV DL+ G ED +
Sbjct: 65 IVRL------HDSISEEGFHY---------------------LVFDLVTGGELFED--IV 95
Query: 122 CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
R +S Q++ + + H G +HRD+KP+N L+ K V + DFGLA
Sbjct: 96 AREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 93
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 143
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D
Sbjct: 144 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDD--- 197
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
E T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 198 -------EMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 246
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSL Q P F
Sbjct: 247 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLA--QMPKMNF 290
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 48/289 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 58
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 59 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 108
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 109 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 166
Query: 185 PTTNRHIPYRENKNLTGTARYASCN-THLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243
+ GT Y+ R + SLG +L + G +P++ +
Sbjct: 167 TVYT---------DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 217
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
+ Q + + ++VS+ + L + +C +L RP +
Sbjct: 218 EIIRGQVFFR---QRVSSECQHLIR-----------WCLALRPSDRPTF 252
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 69
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 119
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 176
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 177 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 222
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSL Q P F
Sbjct: 223 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLA--QMPKMNF 266
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 40/206 (19%)
Query: 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-----IENSGTKHPQLLYEAKV 55
++R + KY+L +K+G G++G ++ + T E+VAVK +NS T + E +
Sbjct: 3 VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS-TDAQRTFREIMI 61
Query: 56 YKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSL 115
L G I ++ L ++ + + + Y V+ ++L P
Sbjct: 62 LTELSGHENI-----------VNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH 110
Query: 116 EDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
+ VY Q+I I+Y+HS G LHRD+KP N L+ V + D
Sbjct: 111 KQYVVY---------------QLIKVIKYLHSGGLLHRDMKPSNILLN---AECHVKVAD 152
Query: 176 FGLAKKY---RDPTTNRHIPYRENKN 198
FGL++ + R T N IP N+N
Sbjct: 153 FGLSRSFVNIRRVTNN--IPLSINEN 176
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 79
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 129
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 186
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 187 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 232
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSL Q P F
Sbjct: 233 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLA--QMPKMNF 276
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 41/229 (17%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GSFGE+F T ++VA+KI + ++ + +L + ++
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
++ L II GG LDLL P D + + T+L
Sbjct: 73 SYLKDTKLWIIMEYLGGGS---------------ALDLLEPGPLD-------ETQIATIL 110
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
+++ ++Y+HS +HRDIK N L+ + +V + DFG+A + D R+
Sbjct: 111 R---EILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRN-- 162
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRD---DLESLGYVLLYFLRGSLP 238
GT + + I+QS D D+ SLG + RG P
Sbjct: 163 -----TFVGTPFWMAPEV---IKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 116/299 (38%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 25 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 83
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 84 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 117
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D
Sbjct: 118 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---- 170
Query: 189 RHIPYRENKN--LTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAA 245
RE + TA A I + D+ S G +L + G +P+ G+
Sbjct: 171 NEXTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNP 226
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ V + P E C + RP + +L+ + D F+
Sbjct: 227 EVIQNLERGYRM-------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 278
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 116/299 (38%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 22 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 81 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 114
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D
Sbjct: 115 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---- 167
Query: 189 RHIPYRENKN--LTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAA 245
RE + TA A I + D+ S G +L + G +P+ G+
Sbjct: 168 NEXTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNP 223
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ V + P E C + RP + +L+ + D F+
Sbjct: 224 EVIQNLERGYRM-------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 275
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 26 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 85 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 118
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D N
Sbjct: 119 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---N 172
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAAT 246
+ K + TA A I + D+ S G +L + G +P+ G+
Sbjct: 173 EYTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNPE 228
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ V + P E C + RP + +L+ + D F+
Sbjct: 229 VIQNLERGYRM-------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 279
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 48/289 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 55
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 56 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 105
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 163
Query: 185 PTTNRHIPYRENKNLTGTARYASCN-THLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243
+ GT Y+ R + SLG +L + G +P++ +
Sbjct: 164 TVYT---------DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
+ Q + + ++VS+ + L + +C +L RP +
Sbjct: 215 EIIRGQVFFR---QRVSSECQHLIR-----------WCLALRPSDRPTF 249
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 82
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 83 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 132
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 133 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 190
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI----ENSGTKHPQLLYEAKVYKILQGGSK 64
Y+L + IG G+F ++ LA H+ T + VAVKI + + + +L E ++ K+L +
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
++L VI T+ + Y GE V D L R
Sbjct: 69 VKLF-----EVIETEKTLYL---------VMEYASGGE----VFDYLVAHGWMKEKEARA 110
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
KF Q+++ ++Y H + +HRD+K +N L+ + I DFG + ++
Sbjct: 111 KFR---------QIVSAVQYCHQKFIVHRDLKAENLLLDADM---NIKIADFGFSNEF-- 156
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQG 241
T + G+ YA+ G + + D+ SLG +L + GSLP+ G
Sbjct: 157 -TFGNKL-----DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 103/255 (40%), Gaps = 39/255 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y L IG GS+GE+ +A T +I + K P+ E + + +I +
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVE----DVDRFKQEIE-I 59
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFS 127
+ +DH I L F D D LV++L G L + V+ +R F
Sbjct: 60 MKSLDHPNIIRLYETFE--------------DNTDIYLVMELCTGGELFERVVH-KRVFR 104
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
+ +++ + Y H HRD+KP+NFL + + +IDFGLA +++
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---- 160
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK 247
P + + GT Y S G+ D+ S G ++ L G P+ A T
Sbjct: 161 ----PGKMMRTKVGTPYYVSPQVLEGLYGPECDEW-SAGVMMYVLLCGYPPFS---APTD 212
Query: 248 KQKYDKICEKKVSTP 262
+ KI E + P
Sbjct: 213 XEVMLKIREGTFTFP 227
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 116/299 (38%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 16 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 75 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 108
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D
Sbjct: 109 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---- 161
Query: 189 RHIPYRENKN--LTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAA 245
RE + TA A I + D+ S G +L + G +P+ G+
Sbjct: 162 NEXTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNP 217
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ V + P E C + RP + +L+ + D F+
Sbjct: 218 EVIQNLERGYRM-------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L + + +K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNN--IVKXQKLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 103/255 (40%), Gaps = 39/255 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y L IG GS+GE+ +A T +I + K P+ E + + +I +
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVE----DVDRFKQEIE-I 76
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFS 127
+ +DH I L F D D LV++L G L + V+ +R F
Sbjct: 77 MKSLDHPNIIRLYETFE--------------DNTDIYLVMELCTGGELFERVVH-KRVFR 121
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
+ +++ + Y H HRD+KP+NFL + + +IDFGLA +++
Sbjct: 122 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---- 177
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK 247
P + + GT Y S G+ D+ S G ++ L G P+ A T
Sbjct: 178 ----PGKMMRTKVGTPYYVSPQVLEGLYGPECDEW-SAGVMMYVLLCGYPPFS---APTD 229
Query: 248 KQKYDKICEKKVSTP 262
+ KI E + P
Sbjct: 230 XEVMLKIREGTFTFP 244
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 118/299 (39%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 18 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 77 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 110
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D
Sbjct: 111 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---- 163
Query: 189 RHIPYRENKN--LTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAA 245
RE + TA A I + D+ S G +L + G +P+ G+
Sbjct: 164 NEXTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNP 219
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ ++ P + P E C + RP + +L+ + D F+
Sbjct: 220 EVIQNLER--GYRMVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 271
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSL Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLA--QMPKMNF 270
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 120/301 (39%), Gaps = 53/301 (17%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K GT P+ L EA+V K L+ ++L
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL- 75
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL---GPSLEDLFVYCRRK 125
Y V E+ + ++ G L+ L +
Sbjct: 76 ----------------------------YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKY 107
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
L ++ ++ Q+ + + YV ++HRD++ N L+G + DFGLA+ D
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLARLIED- 163
Query: 186 TTNRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLK 243
N + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 164 --NEWTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM- 216
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303
++ D++ E+ P C P C ++RP + +L+ D F
Sbjct: 217 --VNREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 270
Query: 304 S 304
+
Sbjct: 271 T 271
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 83
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 84 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 133
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 134 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 190
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 191 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 236
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSL Q P F
Sbjct: 237 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLA--QMPKMNF 280
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 21 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 80 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 113
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D N
Sbjct: 114 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---N 167
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAAT 246
+ K + TA A I + D+ S G +L + G +P+ G+
Sbjct: 168 EYTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNPE 223
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ V + P E C + RP + +L+ + D F+
Sbjct: 224 VIQNLERGYRM-------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 274
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 105 VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164
VLV + L L+ L C T Q++ I Y H R LHRD+KP N L+
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN- 134
Query: 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLE 223
+ ++ I DFGLA+ + IP R+ + T Y + + +G ++ S D+
Sbjct: 135 --REGELKIADFGLARAF-------GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 224 SLGYVLLYFLRGSLPWQGLKAATKKQKYDKI 254
S+G + + G+ + G+ A + + +I
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIFRI 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 22 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 81 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 114
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D N
Sbjct: 115 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---N 168
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAAT 246
+ K + TA A I + D+ S G +L + G +P+ G+
Sbjct: 169 EYTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNPE 224
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ V + P E C + RP + +L+ + D F+
Sbjct: 225 VIQNLERGYRM-------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 275
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 41/229 (17%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GSFGE+F T ++VA+KI + ++ + +L + ++
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
++ L II GG LDLL P D + + T+L
Sbjct: 73 SYLKDTKLWIIMEYLGGGS---------------ALDLLEPGPLD-------ETQIATIL 110
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
+++ ++Y+HS +HRDIK N L+ + +V + DFG+A + D R+
Sbjct: 111 R---EILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRN-- 162
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRD---DLESLGYVLLYFLRGSLP 238
GT + + I+QS D D+ SLG + RG P
Sbjct: 163 -----XFVGTPFWMAPEV---IKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 105 VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164
VLV + L L+ L C T Q++ I Y H R LHRD+KP N L+
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN- 134
Query: 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLE 223
+ ++ I DFGLA+ + IP R+ + T Y + + +G ++ S D+
Sbjct: 135 --REGELKIADFGLARAF-------GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 224 SLGYVLLYFLRGSLPWQGLKAATKKQKYDKI 254
S+G + + G+ + G+ A + + +I
Sbjct: 186 SVGCIFAEMVNGAPLFPGVSEADQLMRIFRI 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y++G +GSG FG ++ V N VA+K +E + L G+++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRVP 55
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V V++ ++ FS G I + W+ + VL+L+ P ++DLF + +
Sbjct: 56 MEV-----VLLKKVSSGFS---GVIRLLDWFE-RPDSFVLILERPEP-VQDLFDFITERG 105
Query: 127 SLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+L+ L + Q++ + + H+ G LHRDIK +N L+ L R ++ +IDFG +D
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD 163
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 46/255 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
+ KLG+ +G G+FG++ A T VAVK+ G H + ++ L
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-------HRALMSE 71
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIP-----------NIKWYGVDGEDNVLVLDLL 111
KI + H+ H ++ + ++ + T G P N+ Y + + N V +
Sbjct: 72 LKI---LIHIGHH-LNVVNLLGACTKPGGPLMVITEFCKFGNLSTY-LRSKRNEFVPYKV 126
Query: 112 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
P EDL+ + +L+ ++ + Q+ +E++ SR +HRD+ N L+ + N V
Sbjct: 127 AP--EDLY---KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV 178
Query: 172 YIIDFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL 230
I DFGLA+ Y+DP Y + ++ + T + + D+ S G VLL
Sbjct: 179 KICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG-VLL 231
Query: 231 Y--FLRGSLPWQGLK 243
+ F G+ P+ G+K
Sbjct: 232 WEIFSLGASPYPGVK 246
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 36/227 (15%)
Query: 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFH-VD 73
+G+G+F E+ LA T ++VA+K K + +G + + V H +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKC-----------IAKKALEGKEGSMENEIAVLHKIK 74
Query: 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVL 132
H I AL I+ S G L++ L+ G L D V + ++ +
Sbjct: 75 HPNIVALDDIYES--------------GGHLYLIMQLVSGGELFDRIVE-KGFYTERDAS 119
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
L Q++ ++Y+H G +HRD+KP+N L + +++ I DFGL+ K DP +
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVL--- 175
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
GT Y + S+ D S+G + L G P+
Sbjct: 176 ----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 118/299 (39%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 17 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 76 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 109
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D
Sbjct: 110 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---- 162
Query: 189 RHIPYRENKN--LTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAA 245
RE + TA A I + D+ S G +L + G +P+ G+
Sbjct: 163 NEXTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNP 218
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ ++ P + P E C + RP + +L+ + D F+
Sbjct: 219 EVIQNLER--GYRMVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 270
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61
+R V Y + IG+GSFG ++ A D+ E+VA+K KV + +
Sbjct: 51 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRF 95
Query: 62 GSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDL 118
++ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 96 KNRELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRV 144
Query: 119 FV-YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + D
Sbjct: 145 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCD 202
Query: 176 FGLAKK 181
FG AK+
Sbjct: 203 FGSAKQ 208
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 118/299 (39%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 16 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 75 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 108
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D
Sbjct: 109 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---- 161
Query: 189 RHIPYRENKN--LTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAA 245
RE + TA A I + D+ S G +L + G +P+ G+
Sbjct: 162 NEXTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNP 217
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ ++ P + P E C + RP + +L+ + D F+
Sbjct: 218 EVIQNLER--GYRMVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 119/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 16 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 75 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 108
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D N
Sbjct: 109 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---N 162
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAAT 246
+ K + TA A I + D+ S G +L + G +P+ G+
Sbjct: 163 EYTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ ++ P + P E C + RP + +L+ + D F+
Sbjct: 219 VIQNLER--GYRMVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 46/255 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
+ KLG+ +G G+FG++ A T VAVK+ G H + ++ L
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-------HRALMSE 71
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIP-----------NIKWYGVDGEDNVLVLDLL 111
KI + H+ H ++ + ++ + T G P N+ Y + + N V +
Sbjct: 72 LKI---LIHIGHH-LNVVNLLGACTKPGGPLMVITEFCKFGNLSTY-LRSKRNEFVPYKV 126
Query: 112 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
P EDL+ + +L+ ++ + Q+ +E++ SR +HRD+ N L+ + N V
Sbjct: 127 AP--EDLY---KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV 178
Query: 172 YIIDFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL 230
I DFGLA+ Y+DP Y + ++ + T + + D+ S G VLL
Sbjct: 179 KICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG-VLL 231
Query: 231 Y--FLRGSLPWQGLK 243
+ F G+ P+ G+K
Sbjct: 232 WEIFSLGASPYPGVK 246
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61
+R V Y + IG+GSFG ++ A D+ E+VA+K KV + +
Sbjct: 53 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRF 97
Query: 62 GSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDL 118
++ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 98 KNRELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRV 146
Query: 119 FV-YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + D
Sbjct: 147 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCD 204
Query: 176 FGLAKK 181
FG AK+
Sbjct: 205 FGSAKQ 210
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 41/229 (17%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GSFGE+F T ++VA+KI + ++ + +L + ++
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
++ L II GG LDLL P D + + T+L
Sbjct: 93 SYLKDTKLWIIMEYLGGGS---------------ALDLLEPGPLD-------ETQIATIL 130
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
+++ ++Y+HS +HRDIK N L+ + +V + DFG+A + D R+
Sbjct: 131 R---EILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRN-- 182
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRD---DLESLGYVLLYFLRGSLP 238
GT + + I+QS D D+ SLG + RG P
Sbjct: 183 -----TFVGTPFWMAPEV---IKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61
+R V Y + IG+GSFG ++ A D+ E+VA+K KV + +
Sbjct: 94 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRF 138
Query: 62 GSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDL 118
++ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 139 KNRELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRV 187
Query: 119 FV-YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + D
Sbjct: 188 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCD 245
Query: 176 FGLAKK 181
FG AK+
Sbjct: 246 FGSAKQ 251
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61
+R V Y + IG+GSFG ++ A D+ E+VA+K KV + +
Sbjct: 49 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRF 93
Query: 62 GSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDL 118
++ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 94 KNRELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRV 142
Query: 119 FV-YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + D
Sbjct: 143 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCD 200
Query: 176 FGLAKK 181
FG AK+
Sbjct: 201 FGSAKQ 206
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61
+R V Y + IG+GSFG ++ A D+ E+VA+K KV + +
Sbjct: 49 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRF 93
Query: 62 GSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDL 118
++ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 94 KNRELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRV 142
Query: 119 FV-YCRRKFSLKT--VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
Y R K +L V + Q+ + Y+HS G HRDIKP N L L + + D
Sbjct: 143 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCD 200
Query: 176 FGLAKK 181
FG AK+
Sbjct: 201 FGSAKQ 206
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 46/255 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
+ KLG+ +G G+FG++ A T VAVK+ G H + ++ L
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-------HRALMSE 80
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIP-----------NIKWYGVDGEDNVLVLDLL 111
KI + H+ H ++ + ++ + T G P N+ Y + + N V +
Sbjct: 81 LKI---LIHIGHH-LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY-LRSKRNEFVPYKV 135
Query: 112 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
P EDL+ + +L+ ++ + Q+ +E++ SR +HRD+ N L+ + N V
Sbjct: 136 AP--EDLY---KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV 187
Query: 172 YIIDFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL 230
I DFGLA+ Y+DP Y + ++ + T + + D+ S G VLL
Sbjct: 188 KICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG-VLL 240
Query: 231 Y--FLRGSLPWQGLK 243
+ F G+ P+ G+K
Sbjct: 241 WEIFSLGASPYPGVK 255
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 114/309 (36%), Gaps = 65/309 (21%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQL----LYEAKVYKILQGGSKIR 66
LG +IG G+FGE+F N +VAVK T P L L EA++ K + +R
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVK-SCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR-- 124
L+ I+ I+ GG D + R
Sbjct: 177 LIGVCTQKQPIY---IVMELVQGG--------------------------DFLTFLRTEG 207
Query: 125 -KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+ +KT+L + A +EY+ S+ +HRD+ N L+ + N + I DFG++++
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEA 264
Query: 184 DPTTN-----RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLL-YFLRGS 236
D R +P + RY+S D+ S G +L F G+
Sbjct: 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSS-----------ESDVWSFGILLWETFSLGA 313
Query: 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296
P+ L Q+ + EK P LC P C + QRP + +
Sbjct: 314 SPYPNL----SNQQTREFVEKGGRLPCPELC---PDAVFRLMEQCWAYEPGQRPSFSTIY 366
Query: 297 RLFHDLFSR 305
+ + R
Sbjct: 367 QELQSIRKR 375
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61
+R V Y + IG+GSFG ++ A D+ E+VA+K KV + +
Sbjct: 43 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRF 87
Query: 62 GSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDL 118
++ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 88 KNRELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRV 136
Query: 119 FV-YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + D
Sbjct: 137 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCD 194
Query: 176 FGLAKK 181
FG AK+
Sbjct: 195 FGSAKQ 200
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 105 VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164
VLV + L L+ L C T Q++ I Y H R LHRD+KP N L+
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN- 134
Query: 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLE 223
+ ++ I DFGLA+ + IP R+ + T Y + + +G ++ S D+
Sbjct: 135 --REGELKIADFGLARAF-------GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 224 SLGYVLLYFLRGSLPWQGLKAATKKQKYDKI 254
S+G + + G+ + G+ A + + +I
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIFRI 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+D+GLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDYGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 119/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 11 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 70 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 103
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D N
Sbjct: 104 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED---N 157
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAAT 246
+ K + TA A I + D+ S G +L + G +P+ G+
Sbjct: 158 EYTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNPE 213
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ ++ P + P E C + RP + +L+ + D F+
Sbjct: 214 VIQNLER--GYRMVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 264
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 54/259 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
+ KLG+ +G G+FG++ A T VAVK+ G H + ++ L
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-------HRALMSE 80
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIP-----------NIKWYGVDGEDNVLVLDLL 111
KI + H+ H ++ + ++ + T G P N+ Y + + N V +
Sbjct: 81 LKI---LIHIGHH-LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY-LRSKRNEFVPYKV 135
Query: 112 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
P EDL+ + +L+ ++ + Q+ +E++ SR +HRD+ N L+ + N V
Sbjct: 136 AP--EDLY---KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV 187
Query: 172 YIIDFGLAKK-YRDPTTNRHIPYRENKNLTGTAR----YASCNTHLGIEQSRRDDLESLG 226
I DFGLA+ Y+DP R G AR + + T + + D+ S G
Sbjct: 188 KICDFGLARDIYKDPDXVR----------KGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 227 YVLLY--FLRGSLPWQGLK 243
VLL+ F G+ P+ G+K
Sbjct: 238 -VLLWEIFSLGASPYPGVK 255
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIRL 67
++ +G+G+F E+ LA T ++ AVK I K + E ++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEI-----------A 72
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKF 126
V+ + H I AL I+ S PN + LV+ L+ G L D V + +
Sbjct: 73 VLRKIKHENIVALEDIYES-----PNHLY---------LVMQLVSGGELFDRIVE-KGFY 117
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ K L Q++ + Y+H G +HRD+KP+N L + +++ I DFGL+K
Sbjct: 118 TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 46/255 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
+ KLG+ +G G+FG++ A T VAVK+ G H + ++ L
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-------HRALMSE 117
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIP-----------NIKWYGVDGEDNVLVLDLL 111
KI + H+ H ++ + ++ + T G P N+ Y + + N V +
Sbjct: 118 LKI---LIHIGHH-LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY-LRSKRNEFVPYKV 172
Query: 112 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
P EDL+ + +L+ ++ + Q+ +E++ SR +HRD+ N L+ + N V
Sbjct: 173 AP--EDLY---KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV 224
Query: 172 YIIDFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL 230
I DFGLA+ Y+DP Y + ++ + T + + D+ S G VLL
Sbjct: 225 KICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG-VLL 277
Query: 231 Y--FLRGSLPWQGLK 243
+ F G+ P+ G+K
Sbjct: 278 WEIFSLGASPYPGVK 292
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 115/295 (38%), Gaps = 48/295 (16%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+++ +KIG G F E++ A+ + VA+K + +++ ++ ++ +
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALK-------------KVQIFDLMDAKARADCI 80
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL------FVYC 122
I L IK+Y EDN L + L DL F
Sbjct: 81 K-----------EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ 129
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN-FLMGLGRKANQVYIIDFGLAKK 181
+R +TV Q+ + +E++HSR +HRDIKP N F+ G V + D GL +
Sbjct: 130 KRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG----VVKLGDLGLGRF 185
Query: 182 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ TT H +L GT Y S + + D+ SLG +L P+ G
Sbjct: 186 FSSKTTAAH-------SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238
Query: 242 LKAATKKQKYDKICEKKVSTPIEVLCKSH-PAEFASYFHYCQSLTFDQRPDYGFL 295
K +C+K L H E + C + ++RPD ++
Sbjct: 239 -----DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L + + +K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNN--IVKXQKLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 69
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C K +
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCA-KLT 119
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 176
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 177 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 222
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSL Q P F
Sbjct: 223 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLA--QMPKMNF 266
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 29/180 (16%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENS---GTKHPQLLYEAKVYKILQ 60
+G +Y++ IG+G++G + A T + VA+K I N+ T + L E K+ K
Sbjct: 53 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK--- 109
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
H H I A+ I T+ YG + + +VLDL+ L + +
Sbjct: 110 ----------HFKHDNIIAIKDILRPTVP-------YG-EFKSVYVVLDLMESDLHQI-I 150
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L+ V Q++ ++Y+HS +HRD+KP N L+ + ++ I DFG+A+
Sbjct: 151 HSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN---ENCELKIGDFGMAR 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 40/236 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+L + IGSG+FG L +NE+VAVK G K + V + + +R
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK-----IDENVKREIINHRSLR- 72
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF--VYCRRK 125
H + I+ +I + T I + Y GE LF + +
Sbjct: 73 ---HPN--IVRFKEVILTPTHLAI--VMEYASGGE---------------LFERICNAGR 110
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
FS Q+I+ + Y H+ HRD+K +N L+ G A ++ I DFG +K
Sbjct: 111 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD-GSPAPRLKICDFGYSKS---- 165
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQ 240
+ + + K+ GT Y + L E + D+ S G L L G+ P++
Sbjct: 166 ----SVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 103 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN-F 160
D VL+L+L+ G L D F+ + S + Q++ + Y+H++ H D+KP+N
Sbjct: 89 DVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNT----HLGIEQ 216
L+ + +IDFGLA + D E KN+ GT + + LG+E
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 217 SRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFAS 276
D+ S+G + L G+ P+ G TK++ I VS + SH +E A
Sbjct: 200 ----DMWSIGVITYILLSGASPFLG---DTKQETLANIT--SVSYDFDEEFFSHTSELAK 250
Query: 277 YF 278
F
Sbjct: 251 DF 252
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 117/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
+L K+G G FGE+++ + T VA+K G P+ L EA+V K L+ ++L
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLY 246
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ I + +L LD L + + L
Sbjct: 247 AVVSEEPIYIVTEYMSKGSL-------------------LDFLKGEM-------GKYLRL 280
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q+ + + YV ++HRD++ N L+G + DFGL + D N
Sbjct: 281 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK---VADFGLGRLIED---N 334
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF-LRGSLPWQGLKAAT 246
+ + K + TA A+ I + D+ S G +L +G +P+ G+
Sbjct: 335 EYTARQGAKFPIKWTAPEAALYGRFTI----KSDVWSFGILLTELTTKGRVPYPGM---V 387
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
++ D++ E+ P C P C ++RP + +L+ D F+
Sbjct: 388 NREVLDQV-ERGYRMPCPPEC---PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 441
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
RR F+ ++ + + ++++H++G HRD+KP+N L + + V I DF L
Sbjct: 105 RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS-----RRDDLESLGYVLLYFLRGSL 237
+ I E G+A Y + + +R DL SLG +L L G
Sbjct: 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
Query: 238 PWQG 241
P+ G
Sbjct: 225 PFVG 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
V Y + IG+GSFG ++ A D+ E+VA+K KV + + ++
Sbjct: 25 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRFKNREL 69
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV-YC 122
++ +DH I L F S+ + +D V LVLD + ++ + Y
Sbjct: 70 QIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRVARHYS 118
Query: 123 RRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG AK
Sbjct: 119 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAK 176
Query: 181 K 181
+
Sbjct: 177 Q 177
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 38/234 (16%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y LG +G G+FG++ + H T VAVKI N K L K+ + +Q L
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQN-----LK 66
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-CRR-KF 126
+F H II +I + T D +V++ + S +LF Y C+ +
Sbjct: 67 LFRHPH-IIKLYQVISTPT---------------DFFMVMEYV--SGGELFDYICKHGRV 108
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
L Q+++ ++Y H +HRD+KP+N L+ A I DFGL+ D
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK---IADFGLSNMMSDGE 165
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239
R + G+ YA+ G + D+ S G +L L G+LP+
Sbjct: 166 FLR--------DSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L + + +K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNN--IVKSQKLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + +++ I+DFGL + D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLCRHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
V Y + IG+GSFG ++ A D+ E+VA+K KV + + ++
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRFKNREL 76
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV-YC 122
++ +DH I L F S+ + +D V LVLD + ++ + Y
Sbjct: 77 QIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRVARHYS 125
Query: 123 RRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG AK
Sbjct: 126 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAK 183
Query: 181 K 181
+
Sbjct: 184 Q 184
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61
+R V Y + IG+GSFG ++ A D+ E+VA+K KV + +
Sbjct: 28 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRF 72
Query: 62 GSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDL 118
++ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 73 KNRELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRV 121
Query: 119 FV-YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + D
Sbjct: 122 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCD 179
Query: 176 FGLAKK 181
FG AK+
Sbjct: 180 FGSAKQ 185
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
V Y + IG+GSFG ++ A D+ E+VA+K KV + + ++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRFKNREL 64
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV-YCRRK 125
++ +DH I L F S+ G ++ + LVLD + ++ + Y R K
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSS-GEKKDVVYLN-------LVLDYVPETVYRVARHYSRAK 116
Query: 126 FSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181
+L + + Q+ + Y+HS G HRDIKP N L L + + DFG AK+
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAKQ 172
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 41/244 (16%)
Query: 5 IGVK-YKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGTKHPQLLYEAKVYKILQ 60
+G++ ++L + +G+G++G++FL + DT ++ A+K+ T ++ +AK + +
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKAT----IVQKAKTTEHTR 106
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV-LVLDLLGPSLEDLF 119
+ V+ H F TL Y E + L+LD + +LF
Sbjct: 107 TERQ----------VLEHIRQSPFLVTL-------HYAFQTETKLHLILDYINGG--ELF 147
Query: 120 VYC--RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ R +F+ V + +++ +E++H G ++RDIK +N L+ V + DFG
Sbjct: 148 THLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFG 204
Query: 178 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE--QSRRDDLESLGYVLLYFLRG 235
L+K++ T R + GT Y + + G + + D SLG ++ L G
Sbjct: 205 LSKEFVADETERAYDF------CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
Query: 236 SLPW 239
+ P+
Sbjct: 259 ASPF 262
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61
+R V Y + IG+GSFG ++ A D+ E+VA+K KV + +
Sbjct: 23 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRF 67
Query: 62 GSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDL 118
++ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 68 KNRELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRV 116
Query: 119 FV-YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + D
Sbjct: 117 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCD 174
Query: 176 FGLAKK 181
FG AK+
Sbjct: 175 FGSAKQ 180
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 36/233 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y +G+G+F E+ LA T ++VA+K + EA K +G + +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKC---------IAKEALEGK--EGSMENEIA 68
Query: 69 VFH-VDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKF 126
V H + H I AL I+ S G L++ L+ G L D V + +
Sbjct: 69 VLHKIKHPNIVALDDIYES--------------GGHLYLIMQLVSGGELFDRIVE-KGFY 113
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
+ + L Q++ ++Y+H G +HRD+KP+N L + +++ I DFGL+ K DP
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPG 172
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ GT Y + S+ D S+G + L G P+
Sbjct: 173 SVL-------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61
+R V Y + IG+GSFG ++ A D+ E+VA+K KV + +
Sbjct: 34 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRF 78
Query: 62 GSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDL 118
++ ++ +DH I L F S+ + +D V LVLD + ++ +
Sbjct: 79 KNRELQIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRV 127
Query: 119 FV-YCRRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
Y R K +L + + Q+ + Y+HS G HRDIKP N L L + + D
Sbjct: 128 ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCD 185
Query: 176 FGLAKK 181
FG AK+
Sbjct: 186 FGSAKQ 191
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 103 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN-F 160
D VL+L+L+ G L D F+ + S + Q++ + Y+H++ H D+KP+N
Sbjct: 89 DVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNT----HLGIEQ 216
L+ + +IDFGLA + D E KN+ GT + + LG+E
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 217 SRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFAS 276
D+ S+G + L G+ P+ G TK++ I VS + SH +E A
Sbjct: 200 ----DMWSIGVITYILLSGASPFLG---DTKQETLANIT--SVSYDFDEEFFSHTSELAK 250
Query: 277 YF 278
F
Sbjct: 251 DF 252
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 29/180 (16%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENS---GTKHPQLLYEAKVYKILQ 60
+G +Y++ IG+G++G + A T + VA+K I N+ T + L E K+ K
Sbjct: 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK--- 108
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
H H I A+ I T+ YG + + +VLDL+ L + +
Sbjct: 109 ----------HFKHDNIIAIKDILRPTVP-------YG-EFKSVYVVLDLMESDLHQI-I 149
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L+ V Q++ ++Y+HS +HRD+KP N L+ + ++ I DFG+A+
Sbjct: 150 HSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN---ENCELKIGDFGMAR 206
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
V Y + IG+GSFG ++ A D+ E+VA+K KV + + ++
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRFKNREL 76
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV-YC 122
++ +DH I L F S+ + +D V LVLD + ++ + Y
Sbjct: 77 QIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRVARHYS 125
Query: 123 RRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG AK
Sbjct: 126 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAK 183
Query: 181 K 181
+
Sbjct: 184 Q 184
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 51/300 (17%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL +K+G+G FGE+++A++ + + VAVK G+ + L EA V K LQ
Sbjct: 191 KLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ-------- 241
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYCRRKF 126
H V +HA+ V E ++ + + G L+ L K
Sbjct: 242 --HDKLVKLHAV------------------VTKEPIYIITEFMAKGSLLDFLKSDEGSKQ 281
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
L ++ + Q+ + ++ R ++HRD++ N L+ I DFGLA+ D
Sbjct: 282 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCK---IADFGLARVIED-- 336
Query: 187 TNRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKA 244
N + K + TA A I + D+ S G +L+ + G +P+ G+
Sbjct: 337 -NEYTAREGAKFPIKWTAPEAINFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGM-- 389
Query: 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
+ + E+ P C P E + C ++RP + +++ + D ++
Sbjct: 390 --SNPEVIRALERGYRMPRPENC---PEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 36/233 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y +G+G+F E+ LA T ++VA+K + EA K +G + +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKC---------IAKEALEGK--EGSMENEIA 68
Query: 69 VFH-VDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKF 126
V H + H I AL I+ S G L++ L+ G L D V + +
Sbjct: 69 VLHKIKHPNIVALDDIYES--------------GGHLYLIMQLVSGGELFDRIVE-KGFY 113
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
+ + L Q++ ++Y+H G +HRD+KP+N L + +++ I DFGL+ K DP
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPG 172
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ GT Y + S+ D S+G + L G P+
Sbjct: 173 SVL-------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
V Y + IG+GSFG ++ A D+ E+VA+K KV + + ++
Sbjct: 24 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRFKNREL 68
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV-YC 122
++ +DH I L F S+ + +D V LVLD + ++ + Y
Sbjct: 69 QIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRVARHYS 117
Query: 123 RRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG AK
Sbjct: 118 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAK 175
Query: 181 K 181
+
Sbjct: 176 Q 176
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
V Y + IG+GSFG ++ A D+ E+VA+K KV + + ++
Sbjct: 21 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRFKNREL 65
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV-YC 122
++ +DH I L F S+ + +D V LVLD + ++ + Y
Sbjct: 66 QIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRVARHYS 114
Query: 123 RRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG AK
Sbjct: 115 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAK 172
Query: 181 K 181
+
Sbjct: 173 Q 173
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 103 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN-F 160
D VL+L+L+ G L D F+ + S + Q++ + Y+H++ H D+KP+N
Sbjct: 89 DVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNT----HLGIEQ 216
L+ + +IDFGLA + D E KN+ GT + + LG+E
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 217 SRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFAS 276
D+ S+G + L G+ P+ G TK++ I VS + SH +E A
Sbjct: 200 ----DMWSIGVITYILLSGASPFLG---DTKQETLANIT--SVSYDFDEEFFSHTSELAK 250
Query: 277 YF 278
F
Sbjct: 251 DF 252
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 38/234 (16%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y LG +G G+FG++ + H T VAVKI N K L K+ + +Q L
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQN-----LK 66
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-CRR-KF 126
+F H II +I + T D +V++ + S +LF Y C+ +
Sbjct: 67 LFRHPH-IIKLYQVISTPT---------------DFFMVMEYV--SGGELFDYICKHGRV 108
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
L Q+++ ++Y H +HRD+KP+N L+ A I DFGL+ D
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK---IADFGLSNMMSDGE 165
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239
R G+ YA+ G + D+ S G +L L G+LP+
Sbjct: 166 FLR--------TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
V Y + IG+GSFG ++ A D+ E+VA+K KV + + ++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRFKNREL 64
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV-YC 122
++ +DH I L F S+ + +D V LVLD + ++ + Y
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 123 RRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG AK
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAK 171
Query: 181 K 181
+
Sbjct: 172 Q 172
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
V Y + IG+GSFG ++ A D+ E+VA+K KV + + ++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRFKNREL 64
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV-YC 122
++ +DH I L F S+ + +D V LVLD + ++ + Y
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 123 RRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG AK
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAK 171
Query: 181 K 181
+
Sbjct: 172 Q 172
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 36/233 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y +G+G+F E+ LA T ++VA+K + EA K +G + +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKC---------IAKEALEGK--EGSMENEIA 68
Query: 69 VFH-VDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKF 126
V H + H I AL I+ S G L++ L+ G L D V + +
Sbjct: 69 VLHKIKHPNIVALDDIYES--------------GGHLYLIMQLVSGGELFDRIVE-KGFY 113
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
+ + L Q++ ++Y+H G +HRD+KP+N L + +++ I DFGL+ K DP
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPG 172
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ GT Y + S+ D S+G + L G P+
Sbjct: 173 SVL-------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
V Y + IG+GSFG ++ A D+ E+VA+K KV + + ++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---------------KVLQDKRFKNREL 64
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LVLDLLGPSLEDLFV-YC 122
++ +DH I L F S+ + +D V LVLD + ++ + Y
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSS-----------GEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 123 RRKFSLKTVL--MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R K +L + + Q+ + Y+HS G HRDIKP N L L + + DFG AK
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL--LDPDTAVLKLCDFGSAK 171
Query: 181 K 181
+
Sbjct: 172 Q 172
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGS 63
+Y+L IG G+F + + T A KI N S H +L EA++ ++L+ +
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN 64
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVY 121
+RL +I G + LV DL+ G ED+
Sbjct: 65 IVRLH-----------------------DSISEEGF----HYLVFDLVTGGELFEDIVA- 96
Query: 122 CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
R +S Q++ + + H G +HRD+KP+N L+ K V + DFGLA
Sbjct: 97 -REYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 45/231 (19%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+IG GSFGE+F T ++VA+KI + ++ + +L + ++
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYCRRKFSLKT 130
++ L II GG LDLL GP E F + T
Sbjct: 89 SYLKGSKLWIIMEYLGGGS---------------ALDLLRAGPFDE---------FQIAT 124
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
+L +++ ++Y+HS +HRDIK N L+ + V + DFG+A + D R+
Sbjct: 125 ML---KEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRN 178
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRD---DLESLGYVLLYFLRGSLP 238
GT + + I+QS D D+ SLG + +G P
Sbjct: 179 -------TFVGTPFWMAPEV---IQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + S D + + ++ +++ + Y+ L+
Sbjct: 52 RYQTLSPVGSGAYGSV--CSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELR------- 102
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 103 LLKHMKHENVIGLLDVFTPATSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 152
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DFGLA+ D T
Sbjct: 153 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTDDEMT 209
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A T VAVK +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+DF LA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFYLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
KY KIG G+ G ++ A V T + VA++ N LQ K L
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-----------------LQQQPKKEL 63
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPN-IKWYGVDGEDNVLVLDLLGPSLEDLFV-YCRRK 125
II+ + ++ + I N + Y V E V++ L G SL D+ C +
Sbjct: 64 --------IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 115
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
+ V + + +E++HS +HRDIK DN L+G+ V + DFG +
Sbjct: 116 GQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPE 169
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ R + GT + + + D+ SLG + + + G P+
Sbjct: 170 QSKRS-------EMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+ FGLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILGFGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 46/255 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
+ KLG+ +G G+FG++ A T VAVK+ G H + ++ L
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-------HRALMSE 82
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIP-----------NIKWYGVDGEDNVLVLDLL 111
KI + H+ H ++ + ++ + T G P N+ Y + + N V
Sbjct: 83 LKI---LIHIGHH-LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY-LRSKRNEFVPYKE 137
Query: 112 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
P EDL+ + +L+ ++ + Q+ +E++ SR +HRD+ N L+ + N V
Sbjct: 138 AP--EDLY---KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV 189
Query: 172 YIIDFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL 230
I DFGLA+ Y+DP Y + ++ + T + + D+ S G VLL
Sbjct: 190 KICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG-VLL 242
Query: 231 Y--FLRGSLPWQGLK 243
+ F G+ P+ G+K
Sbjct: 243 WEIFSLGASPYPGVK 257
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 38/182 (20%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI--ENSGTKHPQL-------LYEAKVYK 57
+Y+LG +G G FG +F + VA+K+ N L L A ++K
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
+ GG G I + W+ E +LVL+ P+ +D
Sbjct: 91 VGAGGGHP-----------------------GVIRLLDWFETQ-EGFMLVLERPLPA-QD 125
Query: 118 LFVYCRRKFSLK--TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
LF Y K L Q++A I++ HSRG +HRDIK +N L+ L R + +ID
Sbjct: 126 LFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAK--LID 183
Query: 176 FG 177
FG
Sbjct: 184 FG 185
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
KY KIG G+ G ++ A V T + VA++ N LQ K L
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-----------------LQQQPKKEL 63
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPN-IKWYGVDGEDNVLVLDLLGPSLEDLFV-YCRRK 125
II+ + ++ + I N + Y V E V++ L G SL D+ C +
Sbjct: 64 --------IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 115
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
+ V + + +E++HS +HRDIK DN L+G+ V + DFG +
Sbjct: 116 GQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPE 169
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ R + GT + + + D+ SLG + + + G P+
Sbjct: 170 QSKRS-------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 55/254 (21%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI---------------ENSGTKHPQL 49
IG Y RK+GSG++GE+ L + + A+K+ +N H ++
Sbjct: 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 50 LYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLD 109
E + K L + I+L D + +T + GG
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYE---GG------------------- 131
Query: 110 LLGPSLEDLF--VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 167
+LF + R KF + Q+++ I Y+H +HRDIKP+N L+
Sbjct: 132 -------ELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS 184
Query: 168 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGY 227
+ I+DFGL+ + R + GTA Y + L + + + D+ S G
Sbjct: 185 LLNIKIVDFGLSSFFSKDYKLR--------DRLGTAYYIAPEV-LKKKYNEKCDVWSCGV 235
Query: 228 VLLYFLRGSLPWQG 241
++ L G P+ G
Sbjct: 236 IMYILLCGYPPFGG 249
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
KY KIG G+ G ++ A V T + VA++ N LQ K L
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-----------------LQQQPKKEL 64
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPN-IKWYGVDGEDNVLVLDLLGPSLEDLFV-YCRRK 125
II+ + ++ + I N + Y V E V++ L G SL D+ C +
Sbjct: 65 --------IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 116
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
+ V + + +E++HS +HRDIK DN L+G+ V + DFG +
Sbjct: 117 GQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPE 170
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ R + GT + + + D+ SLG + + + G P+
Sbjct: 171 QSKRS-------XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 47/298 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G FGE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 12 KLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 71 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 104
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HR+++ N L+ I DFGLA+ D N
Sbjct: 105 NKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVS---DTLSCKIADFGLARLIED---N 158
Query: 189 RHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAAT 246
+ K + TA A I + D+ S G +L + G +P+ G+
Sbjct: 159 EYTAREGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNPE 214
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ ++ P + P E C + RP + +L+ + D F+
Sbjct: 215 VIQNLER--GYRMVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 265
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
KY KIG G+ G ++ A V T + VA++ N LQ K L
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-----------------LQQQPKKEL 63
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPN-IKWYGVDGEDNVLVLDLLGPSLEDLFV-YCRRK 125
II+ + ++ + I N + Y V E V++ L G SL D+ C +
Sbjct: 64 --------IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 115
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
+ V + + +E++HS +HRDIK DN L+G+ V + DFG +
Sbjct: 116 GQIAAV---CRECLQALEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPE 169
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ R + GT + + + D+ SLG + + + G P+
Sbjct: 170 QSKRS-------XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+ + +GSG++G + S VD V I+ L+ + Y+ L+ +
Sbjct: 27 YRDLQPVGSGAYGAV--CSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR-------L 77
Query: 69 VFHVDHVIIHALTIIFS--STLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ H+ H + L +F+ TL D D LV+ +G L L + K
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLD----------DFTDFYLVMPFMGTDLGKLMKH--EKL 125
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181
+ L QM+ + Y+H+ G +HRD+KP N + + ++ I+DFGLA++
Sbjct: 126 GEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ 177
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+D GLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDAGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 35/254 (13%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVY--KILQGGSKIRLVVF 70
R +G G FGE+F T ++ A K N + Y+ + KIL +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 71 HVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKT 130
L ++ + GG Y VD EDN P ++
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDN--------PGFQE-----------PR 290
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
+ Q+++ +E++H R ++RD+KP+N L+ V I D GLA + + T
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQT--- 344
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL--RGSLPWQGLKAATKK 248
+ K GT + + LG E D +LG L + RG +G K K+
Sbjct: 345 ----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 249 QKYDKICEKKVSTP 262
K ++ E+ V+ P
Sbjct: 401 LK-QRVLEQAVTYP 413
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDH 74
+GSG++G + A + E VA+K + + ++ + Y+ L L++ H+ H
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE--IFAKRAYREL-------LLLKHMQH 82
Query: 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLML 134
+ L +F+ + N D LV+ + L+ + KFS + + L
Sbjct: 83 ENVIGLLDVFTPA-SSLRNFY-------DFYLVMPFMQTDLQKIM---GLKFSEEKIQYL 131
Query: 135 ADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
QM+ ++Y+HS G +HRD+KP N + + ++ I+DFGLA+
Sbjct: 132 VYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLAR 174
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 43/229 (18%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVD 73
+IG GSFGE++ T E+VA+KI + ++ + +L + +
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS-LEDLFVYCRRKFSLKTVL 132
++ L II GG LDLL P LE+ ++ T+L
Sbjct: 86 YLKSTKLWIIMEYLGGGS---------------ALDLLKPGPLEETYI--------ATIL 122
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
+++ ++Y+HS +HRDIK N L+ + V + DFG+A + D R+
Sbjct: 123 R---EILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRN-- 174
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRD---DLESLGYVLLYFLRGSLP 238
GT + + I+QS D D+ SLG + +G P
Sbjct: 175 -----XFVGTPFWMAPEV---IKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 35/254 (13%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVY--KILQGGSKIRLVVF 70
R +G G FGE+F T ++ A K N + Y+ + KIL +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 71 HVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKT 130
L ++ + GG Y VD EDN P ++
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDN--------PGFQE-----------PR 290
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
+ Q+++ +E++H R ++RD+KP+N L+ V I D GLA + + T
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQT--- 344
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL--RGSLPWQGLKAATKK 248
+ K GT + + LG E D +LG L + RG +G K K+
Sbjct: 345 ----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 249 QKYDKICEKKVSTP 262
K ++ E+ V+ P
Sbjct: 401 LK-QRVLEQAVTYP 413
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 94/260 (36%), Gaps = 84/260 (32%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK--IENSG-----------------TKHPQ 48
KY+ KIG GS+G +F + DT +IVA+K +E+ KHP
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 49 LLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVL 108
L+ + ++ + ++ LV + DH ++H L G+P
Sbjct: 64 LV---NLLEVFRRKRRLHLVFEYCDHTVLHEL----DRYQRGVPE--------------- 101
Query: 109 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168
V + Q + + + H +HRD+KP+N L+ K
Sbjct: 102 --------------------HLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KH 138
Query: 169 NQVYIIDFGLAK-------KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + DFG A+ Y D R YR + L G +Y D
Sbjct: 139 SVIKLCDFGFARLLTGPSDYYDDEVATRW--YRSPELLVGDTQYGP-----------PVD 185
Query: 222 LESLGYVLLYFLRGSLPWQG 241
+ ++G V L G W G
Sbjct: 186 VWAIGCVFAELLSGVPLWPG 205
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 35/254 (13%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVY--KILQGGSKIRLVVF 70
R +G G FGE+F T ++ A K N + Y+ + KIL +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 71 HVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKT 130
L ++ + GG Y VD EDN P ++
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDN--------PGFQE-----------PR 290
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
+ Q+++ +E++H R ++RD+KP+N L+ V I D GLA + + T
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQT--- 344
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL--RGSLPWQGLKAATKK 248
+ K GT + + LG E D +LG L + RG +G K K+
Sbjct: 345 ----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 249 QKYDKICEKKVSTP 262
K ++ E+ V+ P
Sbjct: 401 LK-QRVLEQAVTYP 413
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 35/254 (13%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVY--KILQGGSKIRLVVF 70
R +G G FGE+F T ++ A K N + Y+ + KIL +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 71 HVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKT 130
L ++ + GG Y VD EDN P ++
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVD-EDN--------PGFQE-----------PR 290
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
+ Q+++ +E++H R ++RD+KP+N L+ V I D GLA + + T
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQT--- 344
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL--RGSLPWQGLKAATKK 248
+ K GT + + LG E D +LG L + RG +G K K+
Sbjct: 345 ----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 249 QKYDKICEKKVSTP 262
K ++ E+ V+ P
Sbjct: 401 LK-QRVLEQAVTYP 413
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+D GLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDRGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+ +GSG++G + A DT + V ++ +++ + Y+ L+
Sbjct: 23 RYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR------- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
++ H+ H + L +F+ + D LV L+G L ++ V C+ K +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSL--------EEFNDVYLVTHLMGADLNNI-VKCQ-KLT 123
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
V L Q++ ++Y+HS +HRD+KP N + + ++ I+D GLA+ D T
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDGGLARHTDDEMT 180
Query: 188 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
T Y + L + ++ D+ S+G ++ L G + G T
Sbjct: 181 ----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG----T 226
Query: 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294
K+ + V TP L K +E A +Y QSLT Q P F
Sbjct: 227 DHIDQLKLILRLVGTPGAELLKKISSESAR--NYIQSLT--QMPKMNF 270
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 103 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN-F 160
D VL+L+L+ G L D F+ + S + Q++ + Y+H++ H D+KP+N
Sbjct: 89 DVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNT----HLGIEQ 216
L+ + +IDFGLA + D E KN+ GT + + LG+E
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 217 SRRDDLESLGYVLLYFLRGSLPWQG 241
D+ S+G + L G+ P+ G
Sbjct: 200 ----DMWSIGVITYILLSGASPFLG 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 40/236 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+L + IG+G+FG L NE+VAVK G K + V + + +R
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEK-----IDENVKREIINHRSLR- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF--VYCRRK 125
H + I+ +I + T I + Y GE LF + +
Sbjct: 74 ---HPN--IVRFKEVILTPTHLAI--VMEYASGGE---------------LFERICNAGR 111
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
FS Q+I+ + Y H+ HRD+K +N L+ G A ++ I DFG +K
Sbjct: 112 FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLD-GSPAPRLKIADFGYSKA---- 166
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQ 240
+ + + K+ GT Y + L E + D+ S G L L G+ P++
Sbjct: 167 ----SVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 103 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN-F 160
D VL+L+L+ G L D F+ + S + Q++ + Y+H++ H D+KP+N
Sbjct: 89 DVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNT----HLGIEQ 216
L+ + +IDFGLA + D E KN+ GT + + LG+E
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 217 SRRDDLESLGYVLLYFLRGSLPWQG 241
D+ S+G + L G+ P+ G
Sbjct: 200 ----DMWSIGVITYILLSGASPFLG 220
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 115/299 (38%), Gaps = 49/299 (16%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL ++G+G GE+++ + + + VAVK G+ P L EA + K LQ +RL
Sbjct: 16 KLVERLGAGQAGEVWMG-YYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V+ I + + E+ LV L PS K ++
Sbjct: 75 A-----VVTQEPIYIITEYM-------------ENGSLVDFLKTPS--------GIKLTI 108
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+L +A Q+ + ++ R ++HRD++ N L+ I DFGLA+ D
Sbjct: 109 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDAEXT 165
Query: 189 RHIPYRENKN--LTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAA 245
RE + TA A I + D+ S G +L + G +P+ G+
Sbjct: 166 A----REGAKFPIKWTAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPGMTNP 217
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
Q ++ V + P E C + RP + +L+ + D F+
Sbjct: 218 EVIQNLERGYRM-------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 103 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN-F 160
D VL+L+L+ G L D F+ + S + Q++ + Y+H++ H D+KP+N
Sbjct: 89 DVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147
Query: 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNT----HLGIEQ 216
L+ + +IDFGLA + D E KN+ GT + + LG+E
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 217 SRRDDLESLGYVLLYFLRGSLPWQG 241
D+ S+G + L G+ P+ G
Sbjct: 200 ----DMWSIGVITYILLSGASPFLG 220
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 48/259 (18%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKV-YKILQGGSKIRL 67
+++ R +G+GSFG + L A+K+ L E V K ++ + RL
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKV---------LKKEIVVRLKQVEHTNDERL 58
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGV--DGEDNVLVLDLLGPSLEDLFVYCRR- 124
++ V H I I+ +G D + +++D + +LF R+
Sbjct: 59 MLSIVTHPFI----------------IRMWGTFQDAQQIFMIMDYIEGG--ELFSLLRKS 100
Query: 125 -KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+F A ++ +EY+HS+ ++RD+KP+N L+ K + I DFG AK
Sbjct: 101 QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGHIKITDFGFAKYVP 157
Query: 184 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243
D T L GT Y + ++ D S G ++ L G P+
Sbjct: 158 DVTY----------XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD-- 205
Query: 244 AATKKQKYDKICEKKVSTP 262
+ + Y+KI ++ P
Sbjct: 206 -SNTMKTYEKILNAELRFP 223
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 40/236 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+L + IGSG+FG L +NE+VAVK G K + V + + +R
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK-----IDENVKREIINHRSLR- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF--VYCRRK 125
H + I+ +I + T I + Y GE LF + +
Sbjct: 74 ---HPN--IVRFKEVILTPTHLAI--VMEYASGGE---------------LFERICNAGR 111
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
FS Q+I+ + Y H+ HRD+K +N L+ G A ++ I FG +K
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD-GSPAPRLKICAFGYSKS---- 166
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQ 240
+ + + K+ GT Y + L E + D+ S G L L G+ P++
Sbjct: 167 ----SVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 96/243 (39%), Gaps = 54/243 (22%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGSK 64
Y+L ++G G+F + V + A KI N S H +L EA++ ++L+ +
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYC 122
+RL H I + + L+ DL+ G ED +
Sbjct: 84 VRL------HDSIS---------------------EEGHHYLIFDLVTGGELFED--IVA 114
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +S Q++ + + H G +HRD+KP+N L+ K V + DFGLA +
Sbjct: 115 REYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV 174
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD------DLESLGYVLLYFLRGS 236
E + G +A +L E R+D DL + G +L L G
Sbjct: 175 EG----------EQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGY 221
Query: 237 LPW 239
P+
Sbjct: 222 PPF 224
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 103 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
D VLV++ + G L D + + ++ Q+ I ++H LH D+KP+N L
Sbjct: 160 DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENIL 219
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ R A Q+ IIDFGLA++Y+ P + K GT + + S D
Sbjct: 220 C-VNRDAKQIKIIDFGLARRYK--------PREKLKVNFGTPEFLAPEVVNYDFVSFPTD 270
Query: 222 LESLGYVLLYFLRGSLPWQG 241
+ S+G + L G P+ G
Sbjct: 271 MWSVGVIAYMLLSGLSPFLG 290
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 121/298 (40%), Gaps = 51/298 (17%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL +K+G+G FGE+++A++ + + VAVK G+ + L EA V K LQ
Sbjct: 18 KLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ-------- 68
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYCRRKF 126
H V +HA+ V E ++ + + G L+ L K
Sbjct: 69 --HDKLVKLHAV------------------VTKEPIYIITEFMAKGSLLDFLKSDEGSKQ 108
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
L ++ + Q+ + ++ R ++HRD++ N L+ I DFGLA+ D
Sbjct: 109 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCK---IADFGLARVIED-- 163
Query: 187 TNRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKA 244
N + K + TA A I + D+ S G +L+ + G +P+ G+
Sbjct: 164 -NEYTAREGAKFPIKWTAPEAINFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGM-- 216
Query: 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302
+ + E+ P C P E + C ++RP + +++ + D
Sbjct: 217 --SNPEVIRALERGYRMPRPENC---PEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDH 74
+GSG++G + S +D V I+ ++ + Y+ L L++ H+ H
Sbjct: 50 VGSGAYGSV--CSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYREL-------LLLKHMQH 100
Query: 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLML 134
+ L +F+ + N D LV+ + L+ + +FS + + L
Sbjct: 101 ENVIGLLDVFTPA-SSLRNFY-------DFYLVMPFMQTDLQKIM---GMEFSEEKIQYL 149
Query: 135 ADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
QM+ ++Y+HS G +HRD+KP N + + ++ I+DFGLA+
Sbjct: 150 VYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLAR 192
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 46/258 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y + IG GS+ E H TN AVK+ + + P +I ++
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP--------------SEEIEIL 74
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKF- 126
+ + H I L ++ DG+ LV +L+ G L D + R+KF
Sbjct: 75 LRYGQHPNIITLKDVYD--------------DGKHVYLVTELMRGGELLDKIL--RQKFF 118
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL-MGLGRKANQVYIIDFGLAKKYRDP 185
S + + + +EY+HS+G +HRD+KP N L + + I DFG AK+ R
Sbjct: 119 SEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR-- 176
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD---DLESLGYVLLYFLRGSLPWQGL 242
EN L A+ +++ D D+ SLG +L L G P+
Sbjct: 177 --------AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANG 228
Query: 243 KAATKKQKYDKICEKKVS 260
+ T ++ +I K +
Sbjct: 229 PSDTPEEILTRIGSGKFT 246
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 115/308 (37%), Gaps = 51/308 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIR 66
+Y + IGSG+FG L T E+VAVK IE + E ++ L+ + +R
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVR 80
Query: 67 L--VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF--VYC 122
V+ H L II GG +L+ +
Sbjct: 81 FKEVILTPTH-----LAIIMEYASGG--------------------------ELYERICN 109
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+FS Q+++ + Y HS HRD+K +N L+ G A ++ I DFG +K
Sbjct: 110 AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLD-GSPAPRLKICDFGYSKS- 167
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQG 241
+ + + K+ GT Y + L E + D+ S G L L G+ P++
Sbjct: 168 -------SVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
Query: 242 LKAATKKQK-YDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG----FLK 296
+ +K +I K S P ++ S T P+ FLK
Sbjct: 221 PEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLK 280
Query: 297 RLFHDLFS 304
L DL +
Sbjct: 281 NLPADLMN 288
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
+ KLG+ +G G+FG++ A T VAVK+ G H + ++ L
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-------HRALMSE 80
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIP-----------NIKWYGVDGEDNVLVLDLL 111
KI + H+ H ++ + ++ + T G P N+ Y + + N V +
Sbjct: 81 LKI---LIHIGHH-LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY-LRSKRNEFVPYKV 135
Query: 112 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
P EDL+ + +L+ ++ + Q+ +E++ SR +HRD+ N L+ + N V
Sbjct: 136 AP--EDLY---KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV 187
Query: 172 YIIDFGLAKKY-RDPTTNRHIPYRENKNLTGTAR----YASCNTHLGIEQSRRDDLESLG 226
I DFGLA+ +DP R G AR + + T + + D+ S G
Sbjct: 188 KICDFGLARDIXKDPDXVR----------KGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 227 YVLLY--FLRGSLPWQGLK 243
VLL+ F G+ P+ G+K
Sbjct: 238 -VLLWEIFSLGASPYPGVK 255
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 106/266 (39%), Gaps = 46/266 (17%)
Query: 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ 60
M + Y + IG GS+ E H TN AVK+ + + P
Sbjct: 21 MNLVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP------------- 67
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLF 119
+I +++ + H I L ++ DG+ LV +L+ G L D
Sbjct: 68 -SEEIEILLRYGQHPNIITLKDVYD--------------DGKHVYLVTELMRGGELLDKI 112
Query: 120 VYCRRKF-SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL-MGLGRKANQVYIIDFG 177
+ R+KF S + + + +EY+HS+G +HRD+KP N L + + I DFG
Sbjct: 113 L--RQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFG 170
Query: 178 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD---DLESLGYVLLYFLR 234
AK+ R EN L A+ +++ D D+ SLG +L L
Sbjct: 171 FAKQLR----------AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
Query: 235 GSLPWQGLKAATKKQKYDKICEKKVS 260
G P+ + T ++ +I K +
Sbjct: 221 GYTPFANGPSDTPEEILTRIGSGKFT 246
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 40/236 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y+L + IGSG+FG L +NE+VAVK G K + V + + +R
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK-----IDENVKREIINHRSLR- 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF--VYCRRK 125
H + I+ +I + T I + Y GE LF + +
Sbjct: 74 ---HPN--IVRFKEVILTPTHLAI--VMEYASGGE---------------LFERICNAGR 111
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
FS Q+I+ + Y H+ HRD+K +N L+ G A ++ I FG +K
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD-GSPAPRLKICAFGYSKS---- 166
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQ 240
+ + + K+ GT Y + L E + D+ S G L L G+ P++
Sbjct: 167 ----SVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
+ KLG+ +G G+FG++ A T VAVK+ G H + ++ L
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-------HRALMSE 71
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIP-----------NIKWYGVDGEDNVLVLDLL 111
KI + H+ H ++ + ++ + T G P N+ Y + + N V +
Sbjct: 72 LKI---LIHIGHH-LNVVNLLGACTKPGGPLMVITEFCKFGNLSTY-LRSKRNEFVPYKV 126
Query: 112 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
P EDL+ + +L+ ++ + Q+ +E++ SR +HRD+ N L+ + N V
Sbjct: 127 AP--EDLY---KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV 178
Query: 172 YIIDFGLAKKY-RDPTTNRHIPYRENKNLTGTAR----YASCNTHLGIEQSRRDDLESLG 226
I DFGLA+ +DP R G AR + + T + + D+ S G
Sbjct: 179 KICDFGLARDIXKDPDXVR----------KGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 227 YVLLY--FLRGSLPWQGLK 243
VLL+ F G+ P+ G+K
Sbjct: 229 -VLLWEIFSLGASPYPGVK 246
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 38/227 (16%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GS G + +A+ T + VAVK ++ + +LL+ V I++ +H
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVV--IMRD--------YHH 101
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
D+V+ ++SS Y V E V++ L G +L D+ + R + + +
Sbjct: 102 DNVVD-----MYSS----------YLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIA 144
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
+ ++ + Y+H++G +HRDIK D+ L+ ++ + DFG + ++ +P
Sbjct: 145 TVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDGRIKLSDFGFCAQ-----VSKEVP 196
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
R K L GT + + + D+ SLG +++ + G P+
Sbjct: 197 KR--KXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D +V++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYIVMELMDANLSQV---IQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDATLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ ++G + + G +++K+ E ++ TP EF
Sbjct: 208 IWSVGVIMGEMIKGGVLFPG---TDHIDQWNKVIE-QLGTP--------SPEFMKKLQPT 255
Query: 282 QSLTFDQRPDY-GF-LKRLFHDLF 303
+ RP Y G+ ++LF D+
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVL 279
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D +V++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYIVMELMDANLSQV---IQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDATLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ ++G + + G +++K+ E ++ TP EF
Sbjct: 208 IWSVGVIMGEMIKGGVLFPG---TDHIDQWNKVIE-QLGTP--------SPEFMKKLQPT 255
Query: 282 QSLTFDQRPDY-GF-LKRLFHDLF 303
+ RP Y G+ ++LF D+
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVL 279
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 54/259 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
+ KLG+ +G G+FG++ A T VAVK+ G H + ++ L
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-------HRALMSE 71
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIP-----------NIKWYGVDGEDNVLVLDLL 111
KI + H+ H ++ + ++ + T G P N+ Y + + N V +
Sbjct: 72 LKI---LIHIGHH-LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY-LRSKRNEFVPYKV 126
Query: 112 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
P EDL+ + +L+ ++ + Q+ +E++ SR +HRD+ N L+ + N V
Sbjct: 127 AP--EDLY---KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVV 178
Query: 172 YIIDFGLAKKY-RDPTTNRHIPYRENKNLTGTAR----YASCNTHLGIEQSRRDDLESLG 226
I DFGLA+ +DP R G AR + + T + + D+ S G
Sbjct: 179 KICDFGLARDIXKDPDXVR----------KGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 227 YVLLY--FLRGSLPWQGLK 243
VLL+ F G+ P+ G+K
Sbjct: 229 -VLLWEIFSLGASPYPGVK 246
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
KY KIG G+ G ++ A V T + VA++ N LQ K L
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-----------------LQQQPKKEL 64
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPN-IKWYGVDGEDNVLVLDLLGPSLEDLFV-YCRRK 125
II+ + ++ + I N + Y V E V++ L G SL D+ C +
Sbjct: 65 --------IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 116
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
+ V + + +E++HS +HR+IK DN L+G+ V + DFG +
Sbjct: 117 GQIAAV---CRECLQALEFLHSNQVIHRNIKSDNILLGMD---GSVKLTDFGFCAQITPE 170
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ R + GT + + + D+ SLG + + + G P+
Sbjct: 171 QSKRS-------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 38/249 (15%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+ IG GSFG++ LA H AVK+ + +L + + I+ S+ +++ +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKV----LQKKAILKKKEEKHIM---SERNVLLKNV 96
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRK--FSLKT 130
H + L F + + VLD + +LF + +R+ F
Sbjct: 97 KHPFLVGLHFSFQT--------------ADKLYFVLDYINGG--ELFYHLQRERCFLEPR 140
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 190
A ++ + + Y+HS ++RD+KP+N L+ + + DFGL K+ + +
Sbjct: 141 ARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCKENIEHNST-- 195
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
GT Y + R D LG VL L G P+ A +
Sbjct: 196 -----TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---EM 247
Query: 251 YDKICEKKV 259
YD I K +
Sbjct: 248 YDNILNKPL 256
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 86/234 (36%), Gaps = 50/234 (21%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVD 73
++G GSFGE+ T AVK K+RL VF +
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVK-------------------------KVRLEVFRAE 115
Query: 74 HVIIHA--LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTV 131
++ A + G + W N+ + L G SL L V +
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWV------NIFMELLEGGSLGQL-VKEQGCLPEDRA 168
Query: 132 LMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY------RDP 185
L Q + +EY+HSR LH D+K DN L L + + DFG A +D
Sbjct: 169 LYYLGQALEGLEYLHSRRILHGDVKADNVL--LSSDGSHAALCDFGHAVCLQPDGLGKDL 226
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
T +IP GT + + LG + D+ S ++L+ L G PW
Sbjct: 227 LTGDYIP--------GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 100 DGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158
D + VL+L+ L G L D K S V+ Q ++++H +H DIKP+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPE 178
Query: 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSR 218
N +M +KA+ V IIDFGLA K P K T TA +A+
Sbjct: 179 N-IMCETKKASSVKIIDFGLATKLN--------PDEIVKVTTATAEFAAPEIVDREPVGF 229
Query: 219 RDDLESLGYVLLYFLRGSLPWQG 241
D+ ++G + L G P+ G
Sbjct: 230 YTDMWAIGVLGYVLLSGLSPFAG 252
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 21/146 (14%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSLKT--VLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D VL+L+L+ +LF + K SL Q++ + Y+HS+ H D+KP+N
Sbjct: 89 DVVLILELVSGG--ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENI 146
Query: 161 LMGLGRKAN-QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNT----HLGIE 215
++ N ++ +IDFG+A K E KN+ GT + + LG+E
Sbjct: 147 MLLDKNVPNPRIKLIDFGIAHKIEAGN--------EFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 216 QSRRDDLESLGYVLLYFLRGSLPWQG 241
D+ S+G + L G+ P+ G
Sbjct: 199 A----DMWSIGVITYILLSGASPFLG 220
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 136 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 195
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D+ SLG ++ L G P+
Sbjct: 196 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPF 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 21/146 (14%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSLKT--VLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D VL+L+L+ +LF + K SL Q++ + Y+HS+ H D+KP+N
Sbjct: 82 DVVLILELVSGG--ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENI 139
Query: 161 LMGLGRKAN-QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNT----HLGIE 215
++ N ++ +IDFG+A K E KN+ GT + + LG+E
Sbjct: 140 MLLDKNVPNPRIKLIDFGIAHKIEAGN--------EFKNIFGTPEFVAPEIVNYEPLGLE 191
Query: 216 QSRRDDLESLGYVLLYFLRGSLPWQG 241
D+ S+G + L G+ P+ G
Sbjct: 192 A----DMWSIGVITYILLSGASPFLG 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 135 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 194
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D+ SLG ++ L G P+
Sbjct: 195 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPF 224
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 37/174 (21%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 144 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 203
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW---------QGLKAATKK 248
+ G +Y SC D+ SLG ++ L G P+ G+K +
Sbjct: 204 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 251
Query: 249 QKYD------KICEKKVSTPIEVLCKSHP------AEFASYFHYCQSLTFDQRP 290
+Y+ ++V I L K+ P EF ++ QS Q P
Sbjct: 252 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 305
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 129 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 188
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D+ SLG ++ L G P+
Sbjct: 189 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPF 218
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 134 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 193
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D+ SLG ++ L G P+
Sbjct: 194 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPF 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 187
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D+ SLG ++ L G P+
Sbjct: 188 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPF 217
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 21/146 (14%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSLKT--VLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D VL+L+L+ +LF + K SL Q++ + Y+HS+ H D+KP+N
Sbjct: 103 DVVLILELVSGG--ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENI 160
Query: 161 LMGLGRKAN-QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNT----HLGIE 215
++ N ++ +IDFG+A K E KN+ GT + + LG+E
Sbjct: 161 MLLDKNVPNPRIKLIDFGIAHKIEAGN--------EFKNIFGTPEFVAPEIVNYEPLGLE 212
Query: 216 QSRRDDLESLGYVLLYFLRGSLPWQG 241
D+ S+G + L G+ P+ G
Sbjct: 213 A----DMWSIGVITYILLSGASPFLG 234
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D +V++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDATLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ ++G + + G +++K+ E ++ TP EF
Sbjct: 208 IWSVGCIMGEMIKGGVLFPG---TDHIDQWNKVIE-QLGTP--------SPEFMKKLQPT 255
Query: 282 QSLTFDQRPDYG--FLKRLFHDLF 303
+ RP Y ++LF D+
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVL 279
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D+ SLG ++ L G P+
Sbjct: 234 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPF 263
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 42/234 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ + K+G GS+G ++ A H +T +IVA+K Q+ E+ + +I++ S ++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIK---------QVPVESDLQEIIKEISIMQQC 81
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYG--VDGEDNVLVLDLLGP-SLEDLFVYCRRK 125
HV+ K+YG D +V++ G S+ D+ +
Sbjct: 82 --DSPHVV------------------KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT 121
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
+ + + + +EY+H +HRDIK N L+ A + DFG+A + D
Sbjct: 122 LTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAK---LADFGVAGQLTDX 178
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
R+ + GT + + I + D+ SLG + G P+
Sbjct: 179 MAKRN-------XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 87 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 143
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 144 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 194
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 195 LEA----DMWSIGVITYILLSGASPFLG 218
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 87 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 143
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 144 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 194
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 195 LEA----DMWSIGVITYILLSGASPFLG 218
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 180 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 239
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D+ SLG ++ L G P+
Sbjct: 240 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPF 269
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 120/299 (40%), Gaps = 59/299 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL +K+G+G FGE+++A++ + + VAVK G+ + L EA V K LQ
Sbjct: 185 KLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ-------- 235
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYCRRKF 126
H V +HA+ V E ++ + + G L+ L K
Sbjct: 236 --HDKLVKLHAV------------------VTKEPIYIITEFMAKGSLLDFLKSDEGSKQ 275
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
L ++ + Q+ + ++ R ++HRD++ N L+ I DFGLA+
Sbjct: 276 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCK---IADFGLAR------ 326
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAA 245
P + TA A I + D+ S G +L+ + G +P+ G+
Sbjct: 327 VGAKFP------IKWTAPEAINFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGM--- 373
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304
+ + E+ P C P E + C ++RP + +++ + D ++
Sbjct: 374 -SNPEVIRALERGYRMPRPENC---PEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 428
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 189
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D+ SLG ++ L G P+
Sbjct: 190 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPF 219
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 40/256 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+++ + IG G+FGE+ + + +++ A+KI N ++L A+ + R V
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKW----EMLKRAETACFREE----RDV 127
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLD-LLGPSLEDLFVYCRRKFS 127
+ + D I L F D + LV+D +G L L +
Sbjct: 128 LVNGDSKWITTLHYAFQ--------------DDNNLYLVMDYYVGGDLLTLLSKFEDRLP 173
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
+ +M+ I+ VH ++HRDIKPDN LM + + + DFG K + T
Sbjct: 174 EEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN---GHIRLADFGSCLKLMEDGT 230
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSR-----RDDLESLGYVLLYFLRGSLPWQGL 242
++ GT Y S +E + D SLG + L G P+
Sbjct: 231 ------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY-- 282
Query: 243 KAATKKQKYDKICEKK 258
A + + Y KI K
Sbjct: 283 -AESLVETYGKIMNHK 297
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 189
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D+ SLG ++ L G P+
Sbjct: 190 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPF 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D +V++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDATLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ ++G + + G +++K+ E ++ TP EF
Sbjct: 208 IWSVGCIMGEMIKGGVLFPG---TDHIDQWNKVIE-QLGTP--------SPEFMKKLQPT 255
Query: 282 QSLTFDQRPDYG--FLKRLFHDLF 303
+ RP Y ++LF D+
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVL 279
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D +V++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDATLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ ++G + + G +++K+ E ++ TP EF
Sbjct: 208 IWSVGCIMGEMIKGGVLFPG---TDHIDQWNKVIE-QLGTP--------SPEFMKKLQPT 255
Query: 282 QSLTFDQRPDYG--FLKRLFHDLF 303
+ RP Y ++LF D+
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVL 279
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
++ L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 146 ML-LDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 102/247 (41%), Gaps = 42/247 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ + R IG G FGE++ DT ++ A+K + K K+ QG +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKC-----------LDKKRIKMKQGET----- 234
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKW--YGVDGEDNV-LVLDLLGPSLEDLFVYCRRK 125
++ I+ +L + G P I Y D + +LDL+ DL + +
Sbjct: 235 -LALNERIMLSLV-----STGDCPFIVCMSYAFHTPDKLSFILDLMNGG--DLHYHLSQH 286
Query: 126 --FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
FS + A ++I +E++H+R ++RD+KP N L+ + V I D GLA +
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFS 343
Query: 184 DPTTNRHIPYRENKNLTGTARYASCNT-HLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
+ + GT Y + G+ D SLG +L LRG P++
Sbjct: 344 KKKPHASV---------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394
Query: 243 KAATKKQ 249
K K +
Sbjct: 395 KTKDKHE 401
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 102/247 (41%), Gaps = 42/247 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ + R IG G FGE++ DT ++ A+K + K K+ QG +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKC-----------LDKKRIKMKQGET----- 233
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKW--YGVDGEDNV-LVLDLLGPSLEDLFVYCRRK 125
++ I+ +L + G P I Y D + +LDL+ DL + +
Sbjct: 234 -LALNERIMLSLV-----STGDCPFIVCMSYAFHTPDKLSFILDLMNGG--DLHYHLSQH 285
Query: 126 --FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
FS + A ++I +E++H+R ++RD+KP N L+ + V I D GLA +
Sbjct: 286 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFS 342
Query: 184 DPTTNRHIPYRENKNLTGTARYASCNT-HLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
+ + GT Y + G+ D SLG +L LRG P++
Sbjct: 343 KKKPHASV---------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 393
Query: 243 KAATKKQ 249
K K +
Sbjct: 394 KTKDKHE 400
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 121/305 (39%), Gaps = 60/305 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL +++G+G FGE+++ + ++ + VAVK GT Q L EA + K LQ +RL
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLY 74
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I+ +T Y G +LD L K L
Sbjct: 75 AVVTREEPIYIITE--------------YMAKGS----LLDFLKSDEGG-------KVLL 109
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD-PTT 187
++ + Q+ + Y+ + ++HRD++ N L+ ++ I DFGLA+ D T
Sbjct: 110 PKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDNEYT 166
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL--RGSLPWQG---- 241
R K A C T + D+ S G +LLY + G +P+ G
Sbjct: 167 AREGAKFPIKWTAPEAINFGCFTI-------KSDVWSFG-ILLYEIVTYGKIPYPGRTNA 218
Query: 242 --LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299
+ A ++ + ++ ++ P E C ++RP + +L+ +
Sbjct: 219 DVMTALSQGYRMPRV-------------ENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 265
Query: 300 HDLFS 304
D ++
Sbjct: 266 DDFYT 270
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 102/247 (41%), Gaps = 42/247 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ + R IG G FGE++ DT ++ A+K + K K+ QG +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKC-----------LDKKRIKMKQGET----- 234
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKW--YGVDGEDNV-LVLDLLGPSLEDLFVYCRRK 125
++ I+ +L + G P I Y D + +LDL+ DL + +
Sbjct: 235 -LALNERIMLSLV-----STGDCPFIVCMSYAFHTPDKLSFILDLMNGG--DLHYHLSQH 286
Query: 126 --FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
FS + A ++I +E++H+R ++RD+KP N L+ + V I D GLA +
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFS 343
Query: 184 DPTTNRHIPYRENKNLTGTARYASCNT-HLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
+ + GT Y + G+ D SLG +L LRG P++
Sbjct: 344 KKKPHASV---------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394
Query: 243 KAATKKQ 249
K K +
Sbjct: 395 KTKDKHE 401
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 102/247 (41%), Gaps = 42/247 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+ + R IG G FGE++ DT ++ A+K + K K+ QG +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKC-----------LDKKRIKMKQGET----- 234
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKW--YGVDGEDNV-LVLDLLGPSLEDLFVYCRRK 125
++ I+ +L + G P I Y D + +LDL+ DL + +
Sbjct: 235 -LALNERIMLSLV-----STGDCPFIVCMSYAFHTPDKLSFILDLMNGG--DLHYHLSQH 286
Query: 126 --FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
FS + A ++I +E++H+R ++RD+KP N L+ + V I D GLA +
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFS 343
Query: 184 DPTTNRHIPYRENKNLTGTARYASCNT-HLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
+ + GT Y + G+ D SLG +L LRG P++
Sbjct: 344 KKKPHASV---------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394
Query: 243 KAATKKQ 249
K K +
Sbjct: 395 KTKDKHE 401
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 37/181 (20%)
Query: 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-ENSGTKHPQLLYEAKVYKILQGGSKI 65
+ Y + IG+GSFG +F A V+++E+ K+ ++ K+ +L ++ +I++ + +
Sbjct: 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL----QIMRIVKHPNVV 95
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRK 125
L F + D +D V + +L E ++ R
Sbjct: 96 DLKAFF------------------------YSNGDKKDEVFLNLVLEYVPETVYRASRHY 131
Query: 126 FSLK-TVLMLAD-----QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
LK T+ ML Q++ + Y+HS G HRDIKP N L L + + +IDFG A
Sbjct: 132 AKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL--LDPPSGVLKLIDFGSA 189
Query: 180 K 180
K
Sbjct: 190 K 190
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D +V++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ ++G + + G +++K+ E ++ TP EF
Sbjct: 208 IWSVGCIMGEMIKGGVLFPG---TDHIDQWNKVIE-QLGTP--------SPEFMKKLQPT 255
Query: 282 QSLTFDQRPDYG--FLKRLFHDLF 303
+ RP Y ++LF D+
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVL 279
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 49/260 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK--IENSGTKHPQLLYEAKVYKILQGGSKI 65
KY LG+ +G+GSFG + +++ + A+K +++ K+ +L + K+L + I
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNREL----DIMKVLDHVNII 63
Query: 66 RLVVFHV--------------DH---------VIIHALTIIFSSTLGGIPNIKWYGVDGE 102
+LV + DH V H ++I + + K+ V E
Sbjct: 64 KLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQN-----KYLNVIME 118
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162
V D L L+ F+ R + + + Q+ + ++HS G HRDIKP N L
Sbjct: 119 ---YVPDTLHKVLKS-FIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL- 173
Query: 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDD 221
+ K N + + DFG AKK IP + + Y + LG E + D
Sbjct: 174 -VNSKDNTLKLCDFGSAKKL--------IPSEPSVAXICSRFYRAPELMLGATEYTPSID 224
Query: 222 LESLGYVLLYFLRGSLPWQG 241
L S+G V + G + G
Sbjct: 225 LWSIGCVFGELILGKPLFSG 244
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 30/176 (17%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLV 68
KL +K+G+G FGE+++ + ++ + VAVK GT Q L EA + K LQ +RL
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I+ +T + G + + + D VL+ P L D
Sbjct: 74 AVVTKEEPIYIITEFMAK--GSL--LDFLKSDEGGKVLL-----PKLID----------- 113
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+ Q+ + Y+ + ++HRD++ N L+ ++ I DFGLA+ D
Sbjct: 114 -----FSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIED 161
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 42/273 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+++ + IG G+FGE+ + +T I A+KI N ++L A+ + R V
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW----EMLKRAETACFREE----RDV 143
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDL-LGPSLEDLFVYCRRKFS 127
+ + D I AL F D LV+D +G L L K
Sbjct: 144 LVNGDCQWITALHYAFQ--------------DENHLYLVMDYYVGGDLLTLLSKFEDKLP 189
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
+M+ I+ +H ++HRDIKPDN L+ + + + DFG K D T
Sbjct: 190 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVN---GHIRLADFGSCLKMNDDGT 246
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSR-----RDDLESLGYVLLYFLRGSLPWQGL 242
++ GT Y S +E D SLG + L G P+
Sbjct: 247 ------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-- 298
Query: 243 KAATKKQKYDKIC--EKKVSTPIEVLCKSHPAE 273
A + + Y KI E++ P V S A+
Sbjct: 299 -AESLVETYGKIMNHEERFQFPSHVTDVSEEAK 330
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 116/288 (40%), Gaps = 48/288 (16%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+++ ++G G+FG+++ A + +T + A K+ + ++ Y ++ +
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE-----------I 69
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ DH I L LG Y DG+ +++ G +++ + + R +
Sbjct: 70 LATCDHPYIVKL-------LGA------YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE 116
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+ ++ QM+ + ++HS+ +HRD+K N LM L + + DFG++ K
Sbjct: 117 PQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTLQK 173
Query: 189 RHIPYRENKNLTGTARYAS-----CNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243
R + GT + + C T + D+ SLG L+ + P L
Sbjct: 174 R-------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291
K K S P +L P++++ F + D+ P+
Sbjct: 227 PMRVLLKIAK------SDPPTLLT---PSKWSVEFRDFLKIALDKNPE 265
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV HVD + + +S L GIP L L+
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMD---ASALTGIP---------------LPLI------ 108
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 109 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 151
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 99/251 (39%), Gaps = 58/251 (23%)
Query: 1 MERIIGVKYKLGRKIGSGSFGEIFLASH-VDTNEIVAVKIENSGTKHPQLLYEAKVYKIL 59
+++ G+ +K IGSG FG++F A H +D V +++ + K + E K
Sbjct: 5 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER---EVKA---- 57
Query: 60 QGGSKIRLVVFHVDHV-IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
+ +DHV I+H N W G D + + + L
Sbjct: 58 ---------LAKLDHVNIVHY-------------NGCWDGFDYDPETSSKNSSRSKTKCL 95
Query: 119 FV---YC-----------RRKFSLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLM 162
F+ +C RR L VL L +Q+ ++Y+HS+ ++RD+KP N +
Sbjct: 96 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL 155
Query: 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDL 222
QV I DFGL ++ + GT RY S + + DL
Sbjct: 156 ---VDTKQVKIGDFGLVTSLKNDG--------KRXRSKGTLRYMSPEQISSQDYGKEVDL 204
Query: 223 ESLGYVLLYFL 233
+LG +L L
Sbjct: 205 YALGLILAELL 215
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 42/273 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+++ + IG G+FGE+ + +T I A+KI N ++L A+ + R V
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW----EMLKRAETACFREE----RDV 127
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDL-LGPSLEDLFVYCRRKFS 127
+ + D I AL F D LV+D +G L L K
Sbjct: 128 LVNGDCQWITALHYAFQ--------------DENHLYLVMDYYVGGDLLTLLSKFEDKLP 173
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
+M+ I+ +H ++HRDIKPDN L+ + + + DFG K D T
Sbjct: 174 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVN---GHIRLADFGSCLKMNDDGT 230
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSR-----RDDLESLGYVLLYFLRGSLPWQGL 242
++ GT Y S +E D SLG + L G P+
Sbjct: 231 ------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY-- 282
Query: 243 KAATKKQKYDKIC--EKKVSTPIEVLCKSHPAE 273
A + + Y KI E++ P V S A+
Sbjct: 283 -AESLVETYGKIMNHEERFQFPSHVTDVSEEAK 314
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 115/285 (40%), Gaps = 43/285 (15%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 32 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F +G Y + ++ G SL KF +
Sbjct: 88 LF-----------------MG-------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 123
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q ++Y+H++ +HRD+K +N + + V I DFGLA + +
Sbjct: 124 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATE-----KS 175
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
R + + L+G+ + + ++ S + D+ + G VL + G LP+ +
Sbjct: 176 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-- 233
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290
+ Q + +S + + + P C D+RP
Sbjct: 234 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 278
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
QM+ I+++HS G +HRD+KP N ++ + + I+DFGLA+ T+ +P+
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAG--TSFMMVPF--- 187
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
T Y + LG+ D+ S+G ++ ++G + + G +++K+ E
Sbjct: 188 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG---TDHIDQWNKVIE 241
Query: 257 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG--FLKRLFHDLF 303
++ TP EF + RP Y ++LF D+
Sbjct: 242 -QLGTPC--------PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL 281
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 30/240 (12%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNE-----IVAVKI--ENSGTKHPQLLYEAKVYKILQGGS 63
L R++G G+FG++FLA + +VAVK + S EA++ LQ
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE- 75
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
+V F+ V L ++F G N K+ G D VL+ + P+
Sbjct: 76 --HIVKFYGVCVEGDPLIMVFEYMKHGDLN-KFLRAHGPDAVLMAEGNPPT--------- 123
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+ + +L +A Q+ A + Y+ S+ F+HRD+ N L+G + V I DFG++ R
Sbjct: 124 -ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENLLVKIGDFGMS---R 176
Query: 184 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL-YFLRGSLPWQGL 242
D + + YR + R+ + + + + D+ SLG VL F G PW L
Sbjct: 177 DVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 103/258 (39%), Gaps = 46/258 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ IG GS+ H TN AVKI + + P +I ++
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPT--------------EEIEIL 69
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKF- 126
+ + H I L ++ DG+ +V +L+ G L D + R+KF
Sbjct: 70 LRYGQHPNIITLKDVYD--------------DGKYVYVVTELMKGGELLDKIL--RQKFF 113
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL-MGLGRKANQVYIIDFGLAKKYRDP 185
S + + + +EY+H++G +HRD+KP N L + + I DFG AK+ R
Sbjct: 114 SEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR-- 171
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD---DLESLGYVLLYFLRGSLPWQGL 242
EN L A+ +E+ D D+ SLG +L L G P+
Sbjct: 172 --------AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG 223
Query: 243 KAATKKQKYDKICEKKVS 260
T ++ +I K S
Sbjct: 224 PDDTPEEILARIGSGKFS 241
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 84/228 (36%), Gaps = 38/228 (16%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVD 73
++G GSFGE+ T AVK K+RL VF +
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVK-------------------------KVRLEVFRAE 134
Query: 74 HVIIHA--LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTV 131
++ A + G + W N+ + L G SL L V +
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWV------NIFMELLEGGSLGQL-VKEQGCLPEDRA 187
Query: 132 LMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 191
L Q + +EY+HSR LH D+K DN L L + + DFG A + + +
Sbjct: 188 LYYLGQALEGLEYLHSRRILHGDVKADNVL--LSSDGSHAALCDFGHAVCLQPDGLGKSL 245
Query: 192 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ GT + + LG + D+ S ++L+ L G PW
Sbjct: 246 --LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 41/237 (17%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F +G Y + ++ G SL KF +
Sbjct: 73 LF-----------------MG-------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 108
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q ++Y+H++ +HRD+K +N + + V I DFGLA +
Sbjct: 109 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT-----VKS 160
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGL 242
R + + L+G+ + + ++ S + D+ + G VL + G LP+ +
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 116/288 (40%), Gaps = 48/288 (16%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+++ ++G G+FG+++ A + +T + A K+ + ++ Y ++ +
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE-----------I 61
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ DH I L LG Y DG+ +++ G +++ + + R +
Sbjct: 62 LATCDHPYIVKL-------LGA------YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE 108
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+ ++ QM+ + ++HS+ +HRD+K N LM L + + DFG++ K
Sbjct: 109 PQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTLQK 165
Query: 189 RHIPYRENKNLTGTARYAS-----CNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243
R + GT + + C T + D+ SLG L+ + P L
Sbjct: 166 R-------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 218
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291
K K S P +L P++++ F + D+ P+
Sbjct: 219 PMRVLLKIAK------SDPPTLLT---PSKWSVEFRDFLKIALDKNPE 257
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 115/285 (40%), Gaps = 43/285 (15%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F +G Y + ++ G SL KF +
Sbjct: 96 LF-----------------MG-------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 131
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q ++Y+H++ +HRD+K +N + + V I DFGLA + +
Sbjct: 132 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATE-----KS 183
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
R + + L+G+ + + ++ S + D+ + G VL + G LP+ +
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-- 241
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290
+ Q + +S + + + P C D+RP
Sbjct: 242 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 138 MIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENK 197
M+ + +H G +H D+KP NFL+ G + +IDFG+A + + TT+
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 214
Query: 198 NLTGTARYASCNTHLGIEQSRRD-----------DLESLGYVLLYFLRGSLPWQGL 242
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 116 EDLFVYCRRKFSLK-----TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQ 170
E+L + R+ SL+ L + Q+ +E++HS+G +HRD+KP N + +
Sbjct: 146 ENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD---DV 202
Query: 171 VYIIDFGLA----KKYRDPTTNRHIP-YRENKNLTGTARYASCNTHLGIEQSRRDDLESL 225
V + DFGL + + T +P Y + GT Y S G S + D+ SL
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSL 262
Query: 226 GYVLLYFL 233
G +L L
Sbjct: 263 GLILFELL 270
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 40/209 (19%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
QM+ I+++HS G +HRD+KP N ++ + + I+DFGLA+ T+ PY
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAG--TSFMMTPY--- 186
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
T Y + LG+ D+ S+G ++ ++G + + G +++K+ E
Sbjct: 187 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG---TDHIDQWNKVIE 240
Query: 257 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 316
++ TP K +Y + RP Y GY F+ +F
Sbjct: 241 -QLGTPCPEFMKKLQPTVRTY--------VENRPKYA-------------GYSFEKLFPD 278
Query: 317 TIL----KYQQTQKTKSQDLLPASRVTNS 341
+ ++ + + ++++DLL V ++
Sbjct: 279 VLFPADSEHNKLKASQARDLLSKMLVIDA 307
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 35/177 (19%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGSK 64
Y+L ++G G+F + + A KI N S H +L EA++ ++L+ +
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 92
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYC 122
+RL +I G + LV DL+ G ED +
Sbjct: 93 VRLH-----------------------DSISEEGF----HYLVFDLVTGGELFED--IVA 123
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
R +S Q++ + ++H +HRD+KP+N L+ K V + DFGLA
Sbjct: 124 REYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 41/237 (17%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F +G Y + ++ G SL KF +
Sbjct: 73 LF-----------------MG-------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 108
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q ++Y+H++ +HRD+K +N + + V I DFGLA +
Sbjct: 109 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT-----VKS 160
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGL 242
R + + L+G+ + + ++ S + D+ + G VL + G LP+ +
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 44/231 (19%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVD 73
++G GSFGE+ T AVK K+RL VF V+
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVK-------------------------KVRLEVFRVE 99
Query: 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGED---NVLVLDLLGPSLEDLF--VYCRRKFSL 128
++ A L + YG E N+ + L G SL L + C
Sbjct: 100 ELVACA-------GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC---LPE 149
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
L Q + +EY+H+R LH D+K DN L L ++ + DFG A +
Sbjct: 150 DRALYYLGQALEGLEYLHTRRILHGDVKADNVL--LSSDGSRAALCDFGHALCLQPDGLG 207
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ + + GT + + +G + D+ S ++L+ L G PW
Sbjct: 208 KSL--LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 138 MIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENK 197
M+ + +H G +H D+KP NFL+ G + +IDFG+A + + TT+
Sbjct: 120 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 170
Query: 198 NLTGTARYASCNTHLGIEQSRRD-----------DLESLGYVLLYFLRGSLPWQGL 242
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 226
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 23/171 (13%)
Query: 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDH 74
+G G F ++ A +TN+IVA+K G + EAK G ++ L +
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRS-----EAK-----DGINRTALREIKLLQ 67
Query: 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLML 134
+ H I G NI LV D + LE + + +
Sbjct: 68 ELSHPNIIGLLDAFGHKSNIS----------LVFDFMETDLEVIIKDNSLVLTPSHIKAY 117
Query: 135 ADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
+ +EY+H LHRD+KP+N L+ + + + DFGLAK + P
Sbjct: 118 MLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLAKSFGSP 165
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 138 MIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENK 197
M+ + +H G +H D+KP NFL+ G + +IDFG+A + + TT+
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 214
Query: 198 NLTGTARYASCNTHLGIEQSRRD-----------DLESLGYVLLYFLRGSLPWQGL 242
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 43/285 (15%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F +G Y + ++ G SL KF +
Sbjct: 96 LF-----------------MG-------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 131
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q ++Y+H++ +HRD+K +N + + V I DFGLA +
Sbjct: 132 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT-----VKS 183
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
R + + L+G+ + + ++ S + D+ + G VL + G LP+ +
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-- 241
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290
+ Q + +S + + + P C D+RP
Sbjct: 242 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 50/246 (20%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVK---IENSGTKHPQLLYEAKVYKILQGGSKI 65
Y+L IGSG+ + A E VA+K +E T +LL E +Q S+
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKE------IQAMSQC 70
Query: 66 ---RLVVFHVDHVIIHALTIIFSSTLGG--IPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
+V ++ V+ L ++ GG + IK GE VLD
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE---------- 120
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
T+ + +++ +EY+H G +HRD+K N L+G + V I DFG++
Sbjct: 121 --------STIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSA 169
Query: 181 KYR---DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSR----RDDLESLGYVLLYFL 233
D T N + K GT + + +EQ R + D+ S G +
Sbjct: 170 FLATGGDITRN-----KVRKTFVGTPCWMAPEV---MEQVRGYDFKADIWSFGITAIELA 221
Query: 234 RGSLPW 239
G+ P+
Sbjct: 222 TGAAPY 227
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
QM+ I+++HS G +HRD+KP N ++ + + I+DFGLA+ T+ PY
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAG--TSFMMTPY--- 185
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
T Y + LG+ D+ S+G ++ ++G + + G +++K+ E
Sbjct: 186 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG---TDHIDQWNKVIE 239
Query: 257 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG--FLKRLFHDLF 303
++ TP K +Y + RP Y ++LF D+
Sbjct: 240 -QLGTPCPEFMKKLQPTVRTY--------VENRPKYAGYSFEKLFPDVL 279
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G FGE++ + VAVK T + L EA V K
Sbjct: 8 MERTDITMKHKLG----GGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 63
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 97
Query: 119 FVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R++ S +L +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 154
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 155 LSRLMTGDTXTAH 167
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 41/237 (17%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F +G Y + ++ G SL KF +
Sbjct: 68 LF-----------------MG-------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 103
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q ++Y+H++ +HRD+K +N + + V I DFGLA + +
Sbjct: 104 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATE-----KS 155
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGL 242
R + + L+G+ + + ++ S + D+ + G VL + G LP+ +
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 41/237 (17%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 14 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F +G Y + ++ G SL KF +
Sbjct: 70 LF-----------------MG-------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 105
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q ++Y+H++ +HRD+K +N + + V I DFGLA +
Sbjct: 106 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT-----VKS 157
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGL 242
R + + L+G+ + + ++ S + D+ + G VL + G LP+ +
Sbjct: 158 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 214
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE----KFLQEALTMR 66
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 67 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 105
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
FSL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 106 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---ATDCVKLGDFGLSRYME 162
Query: 184 DPT 186
D T
Sbjct: 163 DST 165
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 43/285 (15%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 39 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F +G Y + ++ G SL KF +
Sbjct: 95 LF-----------------MG-------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 130
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q ++Y+H++ +HRD+K +N + + V I DFGLA +
Sbjct: 131 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT-----VKS 182
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGLKAA 245
R + + L+G+ + + ++ S + D+ + G VL + G LP+ +
Sbjct: 183 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-- 240
Query: 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290
+ Q + +S + + + P C D+RP
Sbjct: 241 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 285
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 138 MIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENK 197
M+ + +H G +H D+KP NFL+ G + +IDFG+A + + TT+
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 167
Query: 198 NLTGTARYASCNTHLGIEQSRRD-----------DLESLGYVLLYFLRGSLPWQGL 242
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+L+L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILILELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPAFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 50/246 (20%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVK---IENSGTKHPQLLYEAKVYKILQGGSKI 65
Y+L IGSG+ + A E VA+K +E T +LL E +Q S+
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKE------IQAMSQC 65
Query: 66 ---RLVVFHVDHVIIHALTIIFSSTLGG--IPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
+V ++ V+ L ++ GG + IK GE VLD
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE---------- 115
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
T+ + +++ +EY+H G +HRD+K N L+G + V I DFG++
Sbjct: 116 --------STIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSA 164
Query: 181 KYR---DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSR----RDDLESLGYVLLYFL 233
D T N + K GT + + +EQ R + D+ S G +
Sbjct: 165 FLATGGDITRN-----KVRKTFVGTPCWMAPEV---MEQVRGYDFKADIWSFGITAIELA 216
Query: 234 RGSLPW 239
G+ P+
Sbjct: 217 TGAAPY 222
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 41/237 (17%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F +G Y + ++ G SL KF +
Sbjct: 68 LF-----------------MG-------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 103
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q ++Y+H++ +HRD+K +N + + V I DFGLA +
Sbjct: 104 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT-----VKS 155
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGL 242
R + + L+G+ + + ++ S + D+ + G VL + G LP+ +
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 138 MIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENK 197
M+ + +H G +H D+KP NFL+ G + +IDFG+A + + TT+
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 186
Query: 198 NLTGTARYASCNTHLGIEQSRRD-----------DLESLGYVLLYFLRGSLPWQGL 242
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 40/209 (19%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
QM+ I+++HS G +HRD+KP N ++ + + I+DFGLA+ T+ PY
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAG--TSFMMTPY--- 185
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
T Y + LG+ D+ S+G ++ ++G + + G +++K+ E
Sbjct: 186 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG---TDHIDQWNKVIE 239
Query: 257 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 316
++ TP EF + RP Y GY F+ +F
Sbjct: 240 -QLGTP--------SPEFMKKLQPTVRTYVENRPKYA-------------GYSFEKLFPD 277
Query: 317 TIL----KYQQTQKTKSQDLLPASRVTNS 341
+ ++ + + ++++DLL V ++
Sbjct: 278 VLFPADSEHNKLKASQARDLLSKMLVIDA 306
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 138 MIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENK 197
M+ + +H G +H D+KP NFL+ G + +IDFG+A + + TT+
Sbjct: 116 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTS-----VVKD 166
Query: 198 NLTGTARYASCNTHLGIEQSRRD-----------DLESLGYVLLYFLRGSLPWQGL 242
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 222
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 38/227 (16%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVKIEN-SGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GS G + LA + VAVK+ + + +LL+ V I++ +V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVV--IMRDYQHFNVVEMY- 108
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
K Y V E VL+ L G +L D+ R + + +
Sbjct: 109 ----------------------KSYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIA 144
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
+ + ++ + Y+H++G +HRDIK D+ L+ L +V + DFG + ++ +P
Sbjct: 145 TVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD---GRVKLSDFGFCAQ-----ISKDVP 196
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
R K L GT + + + D+ SLG +++ + G P+
Sbjct: 197 KR--KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 44/231 (19%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVD 73
++G GSFGE+ T AVK K+RL VF V+
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVK-------------------------KVRLEVFRVE 115
Query: 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGED---NVLVLDLLGPSLEDLF--VYCRRKFSL 128
++ A L + YG E N+ + L G SL L + C
Sbjct: 116 ELVACA-------GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC---LPE 165
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
L Q + +EY+H+R LH D+K DN L L ++ + DFG A +
Sbjct: 166 DRALYYLGQALEGLEYLHTRRILHGDVKADNVL--LSSDGSRAALCDFGHALCLQPDGLG 223
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ + + GT + + +G + D+ S ++L+ L G PW
Sbjct: 224 KSL--LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 32/186 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE----KFLQEALTMR 66
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 67 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 105
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
FSL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 106 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYME 162
Query: 184 DPTTNR 189
D T +
Sbjct: 163 DSTXXK 168
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE VAVKI K + + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 137
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N L + + ++ +ID+GLA+ Y
Sbjct: 138 YEILKALD-------YCHSMGIMHRDVKPHNVL--IDHEHRKLRLIDWGLAEFY 182
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 41/237 (17%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
+G++IGSGSFG ++ H D VAVK+ N PQ L K +L+ + ++
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+F +G Y + ++ G SL KF +
Sbjct: 68 LF-----------------MG-------YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEM 103
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
++ +A Q ++Y+H++ +HRD+K +N + + V I DFGLA +
Sbjct: 104 IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT-----VKS 155
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGL 242
R + + L+G+ + + ++ S + D+ + G VL + G LP+ +
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 44/231 (19%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVD 73
++G GSFGE+ T AVK K+RL VF V+
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVK-------------------------KVRLEVFRVE 113
Query: 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGED---NVLVLDLLGPSLEDLF--VYCRRKFSL 128
++ A L + YG E N+ + L G SL L + C
Sbjct: 114 ELVACA-------GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC---LPE 163
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
L Q + +EY+H+R LH D+K DN L L ++ + DFG A +
Sbjct: 164 DRALYYLGQALEGLEYLHTRRILHGDVKADNVL--LSSDGSRAALCDFGHALCLQPDGLG 221
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ + + GT + + +G + D+ S ++L+ L G PW
Sbjct: 222 KSL--LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Query: 100 DGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158
D + V++ + + G L + K S + Q+ + ++H ++H D+KP+
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 284
Query: 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSR 218
N +M +++N++ +IDFGL T P + K TGTA +A+ G
Sbjct: 285 N-IMFTTKRSNELKLIDFGL--------TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGY 335
Query: 219 RDDLESLGYVLLYFLRGSLPWQG 241
D+ S+G + L G P+ G
Sbjct: 336 YTDMWSVGVLSYILLSGLSPFGG 358
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV HV + T + +S L GIP L L+
Sbjct: 69 VIHTENKLYLVFEHVHQDL---KTFMDASALTGIP---------------LPLI------ 104
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 105 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 147
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 54/244 (22%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGS 63
+Y+L ++G G+F + V + A I N S H +L EA++ ++L+ +
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVY 121
+RL H I + + L+ DL+ G ED +
Sbjct: 72 IVRL------HDSIS---------------------EEGHHYLIFDLVTGGELFED--IV 102
Query: 122 CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181
R +S Q++ + + H G +HR++KP+N L+ K V + DFGLA +
Sbjct: 103 AREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162
Query: 182 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD------DLESLGYVLLYFLRG 235
E + G +A +L E R+D DL + G +L L G
Sbjct: 163 VEG----------EQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
Query: 236 SLPW 239
P+
Sbjct: 210 YPPF 213
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 18/115 (15%)
Query: 138 MIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN--------- 188
M+ + +H G +H D+KP NFL+ G + +IDFG+A + + TT+
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGA 219
Query: 189 -RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
++P K+++ + N + S + D+ SLG +L Y G P+Q +
Sbjct: 220 VNYMPPEAIKDMSSSRE----NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE----KFLQEALTMR 446
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 447 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 485
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
FSL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---ATDCVKLGDFGLSRYME 542
Query: 184 DPT 186
D T
Sbjct: 543 DST 545
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 35/234 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y + ++G+G+FG + + T A K P + V K +Q S +R
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKF----VMTPHESDKETVRKEIQTMSVLR-- 106
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFS 127
H + L F D + V++ + + G L + K S
Sbjct: 107 -----HPTLVNLHDAFE--------------DDNEMVMIYEFMSGGELFEKVADEHNKMS 147
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
+ Q+ + ++H ++H D+KP+N +M +++N++ +IDFGL T
Sbjct: 148 EDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN-IMFTTKRSNELKLIDFGL--------T 198
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
P + K TGTA +A+ G D+ S+G + L G P+ G
Sbjct: 199 AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 252
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 119 FVYCRRKFSLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
++ RR L VL L +Q+ ++Y+HS+ +HRD+KP N + QV I DF
Sbjct: 124 WIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL---VDTKQVKIGDF 180
Query: 177 GLAKKYR-DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
GL + D R GT RY S + + DL +LG +L L
Sbjct: 181 GLVTSLKNDGKRTRS---------KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDXTLKILDFGLART--AGTSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 259
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 260 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 306
Query: 335 ASRVT 339
A R++
Sbjct: 307 AKRIS 311
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 117 DLFVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 174
+LF + R+ F+ + ++++ +EY+HSR ++RDIK +N ++ K + I
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKIT 147
Query: 175 DFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
DFGL K+ D T K GT Y + + R D LG V+ +
Sbjct: 148 DFGLCKEGISDGAT--------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 234 RGSLPW 239
G LP+
Sbjct: 200 CGRLPF 205
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + T + PY
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPE 187
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D+ SLG ++ L G P+
Sbjct: 188 VLGPEKYDKSC------------DMWSLGVIMYILLCGYPPF 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
Q++ + Y+H G +HRD+KP+N L + I DFGL+K
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL--------M 207
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
K + GT Y + G D+ S+G + L G P+
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 117 DLFVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 174
+LF + R+ F+ + ++++ +EY+HSR ++RDIK +N ++ K + I
Sbjct: 94 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKIT 150
Query: 175 DFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
DFGL K+ D T K GT Y + + R D LG V+ +
Sbjct: 151 DFGLCKEGISDGAT--------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 202
Query: 234 RGSLPW 239
G LP+
Sbjct: 203 CGRLPF 208
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 45/200 (22%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
I +Y++ IG+GS+G + A +VA+K K+ ++ +
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIK---------------KILRVFEDLID 95
Query: 65 IRLVVFHV--------DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE 116
+ ++ + DHV+ L I+ + + +VL++ +
Sbjct: 96 CKRILREIAILNRLNHDHVV-KVLDIVIPKDVEKFDEL----------YVVLEIADSDFK 144
Query: 117 DLF---VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173
LF VY + +KT+L ++ ++YVHS G LHRD+KP N L+ + V +
Sbjct: 145 KLFRTPVYLT-ELHIKTLLY---NLLVGVKYVHSAGILHRDLKPANCLVN---QDCSVKV 197
Query: 174 IDFGLAKKYRDPTT-NRHIP 192
DFGLA+ P N +P
Sbjct: 198 CDFGLARTVDYPENGNSQLP 217
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 46/184 (25%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQGGSK 64
Y++ IG GS+G ++LA + N+ VA+K N + ++L E + L+
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
IRL H L II L ++ +VL++ L+ LF
Sbjct: 90 IRL----------HDL-IIPEDLLKF-----------DELYIVLEIADSDLKKLF----- 122
Query: 125 KFSLKTVLMLADQMIARIEY--------VHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
KT + L +Q + I Y +H G +HRD+KP N L+ + V I DF
Sbjct: 123 ----KTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN---QDCSVKICDF 175
Query: 177 GLAK 180
GLA+
Sbjct: 176 GLAR 179
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 98/271 (36%), Gaps = 67/271 (24%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y GR +G G F + + + +DT E+ A K+ +L+ K ++
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSM-------------LLKPHQKEKM 89
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-----C 122
+ IH DN V+ G +D FVY C
Sbjct: 90 ST----EIAIHK---------------------SLDNPHVVGFHGFFEDDDFVYVVLEIC 124
Query: 123 RRKFSLK-----------TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
RR+ L+ Q I ++Y+H+ +HRD+K N + V
Sbjct: 125 RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDV 181
Query: 172 YIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY 231
I DFGLA K K+L GT Y + S D+ SLG +L
Sbjct: 182 KIGDFGLATKI-------EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 232 FLRGSLPWQGLKAATKKQKYDKICEKKVSTP 262
L G P++ + K+ Y +I + + S P
Sbjct: 235 LLVGKPPFE---TSCLKETYIRIKKNEYSVP 262
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE----KFLQEALTMR 446
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 447 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 485
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
FSL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYME 542
Query: 184 DPT 186
D T
Sbjct: 543 DST 545
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 40/182 (21%)
Query: 9 YKLGRKIGSGSFGEIFLAS---HVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKI 65
+K+ KIG G+F ++LA+ V E +A+K T HP I
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALK-HLIPTSHP-----------------I 64
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKW--YGVDGEDNVLVLDLLGPSLE-DLFVYC 122
R+ + LT+ GG N+ Y D+V++ P LE + F+
Sbjct: 65 RIAAE------LQCLTVA-----GGQDNVMGVKYCFRKNDHVVIA---MPYLEHESFLDI 110
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
S + V + ++ +H G +HRD+KP NFL R+ + ++DFGLA+
Sbjct: 111 LNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLY--NRRLKKYALVDFGLAQGT 168
Query: 183 RD 184
D
Sbjct: 169 HD 170
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA----KKYRDPTTNRHIP 192
Q+ +E++HS+G +HRD+KP N + + V + DFGL + + T +P
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 193 -YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
Y + GT Y S G S + D+ SLG +L L
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 12 GRKIGSGSFGEIFLASHVDTNEIVAVK--IENSGTKHPQLLYEAKVYKILQGGSKIRLV- 68
G +G G FG+ +H +T E++ +K I L E KV + L+ + ++ +
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
V + D + I TL GI IK S++ + + +R
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGI--IK------------------SMDSQYPWSQR---- 110
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+ A + + + Y+HS +HRD+ N L+ R+ V + DFGLA+ D T
Sbjct: 111 ---VSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQ 164
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 46/258 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ IG GS+ H TN AVKI + + P +I ++
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPT--------------EEIEIL 69
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKF- 126
+ + H I L ++ DG+ +V +L G L D + R+KF
Sbjct: 70 LRYGQHPNIITLKDVYD--------------DGKYVYVVTELXKGGELLDKIL--RQKFF 113
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL-MGLGRKANQVYIIDFGLAKKYRDP 185
S + + + +EY+H++G +HRD+KP N L + + I DFG AK+ R
Sbjct: 114 SEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR-- 171
Query: 186 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD---DLESLGYVLLYFLRGSLPWQGL 242
EN L A+ +E+ D D+ SLG +L L G P+
Sbjct: 172 --------AENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANG 223
Query: 243 KAATKKQKYDKICEKKVS 260
T ++ +I K S
Sbjct: 224 PDDTPEEILARIGSGKFS 241
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 117 DLFVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 174
+LF + R+ F+ + ++++ +EY+HSR ++RDIK +N ++ K + I
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKIT 147
Query: 175 DFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
DFGL K+ D T K GT Y + + R D LG V+ +
Sbjct: 148 DFGLCKEGISDGAT--------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 234 RGSLPW 239
G LP+
Sbjct: 200 CGRLPF 205
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 98/271 (36%), Gaps = 67/271 (24%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y GR +G G F + + + +DT E+ A K+ +L+ K ++
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSM-------------LLKPHQKEKM 73
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-----C 122
+ IH DN V+ G +D FVY C
Sbjct: 74 ST----EIAIHK---------------------SLDNPHVVGFHGFFEDDDFVYVVLEIC 108
Query: 123 RRKFSLK-----------TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
RR+ L+ Q I ++Y+H+ +HRD+K N + V
Sbjct: 109 RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDV 165
Query: 172 YIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY 231
I DFGLA K K+L GT Y + S D+ SLG +L
Sbjct: 166 KIGDFGLATKI-------EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 218
Query: 232 FLRGSLPWQGLKAATKKQKYDKICEKKVSTP 262
L G P++ + K+ Y +I + + S P
Sbjct: 219 LLVGKPPFE---TSCLKETYIRIKKNEYSVP 246
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ RK+G G + E+F +V+ NE +KI K + ++ G + ++L+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGGPNIVKLL 92
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
D H+ T P++ + V+ D +L P+L D + +
Sbjct: 93 DIVRDQ---HSKT----------PSLIFEYVNNTD----FKVLYPTLTD--------YDI 127
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ + +++ ++Y HS+G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 128 RYYIY---ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 117 DLFVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 174
+LF + R+ F+ + ++++ +EY+HSR ++RDIK +N ++ K + I
Sbjct: 96 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKIT 152
Query: 175 DFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
DFGL K+ D T K GT Y + + R D LG V+ +
Sbjct: 153 DFGLCKEGISDGAT--------MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 234 RGSLPW 239
G LP+
Sbjct: 205 CGRLPF 210
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 95 QDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 151
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 152 V---KSDXTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 200
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 201 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 252
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 253 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 299
Query: 335 ASRVT 339
A R++
Sbjct: 300 AKRIS 304
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDXTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 259
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 260 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 306
Query: 335 ASRVT 339
A R++
Sbjct: 307 AKRIS 311
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 117 DLFVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 174
+LF + R+ F+ + ++++ +EY+HSR ++RDIK +N ++ K + I
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKIT 147
Query: 175 DFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
DFGL K+ D T K GT Y + + R D LG V+ +
Sbjct: 148 DFGLCKEGISDGAT--------MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 234 RGSLPW 239
G LP+
Sbjct: 200 CGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 117 DLFVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 174
+LF + R+ F+ + ++++ +EY+HSR ++RDIK +N ++ K + I
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKIT 147
Query: 175 DFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
DFGL K+ D T K GT Y + + R D LG V+ +
Sbjct: 148 DFGLCKEGISDGAT--------MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 234 RGSLPW 239
G LP+
Sbjct: 200 CGRLPF 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 15 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 70
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 104
Query: 119 FVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R++ S +L +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 105 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 161
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 162 LSRLMTGDTYTAH 174
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDXTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 259
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 260 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 306
Query: 335 ASRVT 339
A R++
Sbjct: 307 AKRIS 311
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 117 DLFVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 174
+LF + R+ F+ + ++++ +EY+HSR ++RDIK +N ++ K + I
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKIT 147
Query: 175 DFGLAKK-YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
DFGL K+ D T K GT Y + + R D LG V+ +
Sbjct: 148 DFGLCKEGISDGAT--------MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 234 RGSLPW 239
G LP+
Sbjct: 200 CGRLPF 205
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 28/185 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG--TKHPQLLYEAKVYKILQGGSKIR 66
+++ + IG G+F E+ + T ++ A+KI N K ++ + +L G +
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ H + L ++ +GG D + +L G + +F
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGG------------DLLTLLSKFGERIPAEMA----RF 166
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
L ++M D VH G++HRDIKPDN L+ + + + DFG K R
Sbjct: 167 YLAEIVMAIDS-------VHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADG 216
Query: 187 TNRHI 191
T R +
Sbjct: 217 TVRSL 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 44/205 (21%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK---IENSGTKHPQLLYEAKVYKILQGGSKIRLVVF 70
K+G G++ ++ T+ +VA+K +E+ + E + K L+ + + L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL--- 65
Query: 71 HVDHVIIH---ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
H IIH +LT++F + L L+ C +
Sbjct: 66 ---HDIIHTEKSLTLVF------------------------EYLDKDLKQYLDDCGNIIN 98
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
+ V + Q++ + Y H + LHRD+KP N L+ + ++ + DFGLA+ PT
Sbjct: 99 MHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPTK 155
Query: 188 NRH-----IPYRENKNLTGTARYAS 207
+ YR L G+ Y++
Sbjct: 156 TYDNEVVTLWYRPPDILLGSTDYST 180
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 46/254 (18%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
+ KLG+ +G G+FG++ A T VAVK+ G H + ++ L
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE-------HRALMSE 82
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVL------DLLGPSLE 116
KI + H+ H ++ + ++ + T G P + N+ + + E
Sbjct: 83 LKI---LIHIGHH-LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 117 DLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
DL+ + +L+ ++ + Q+ +E++ SR +HRD+ N L+ + N V I DF
Sbjct: 139 DLY---KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDF 192
Query: 177 GLAKKY-RDPTTNRHIPYRENKNLTGTAR----YASCNTHLGIEQSRRDDLESLGYVLLY 231
GLA+ +DP R G AR + + T + + D+ S G VLL+
Sbjct: 193 GLARDIXKDPDXVR----------KGDARLPLKWMAPETIFDRVYTIQSDVWSFG-VLLW 241
Query: 232 --FLRGSLPWQGLK 243
F G+ P+ G+K
Sbjct: 242 EIFSLGASPYPGVK 255
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 97/271 (35%), Gaps = 67/271 (24%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y GR +G G F + + + +DT E+ A K+ +L+ K ++
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSM-------------LLKPHQKEKM 89
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-----C 122
+ IH DN V+ G +D FVY C
Sbjct: 90 ST----EIAIHK---------------------SLDNPHVVGFHGFFEDDDFVYVVLEIC 124
Query: 123 RRKFSLK-----------TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
RR+ L+ Q I ++Y+H+ +HRD+K N + V
Sbjct: 125 RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDV 181
Query: 172 YIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY 231
I DFGLA K K L GT Y + S D+ SLG +L
Sbjct: 182 KIGDFGLATKI-------EFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 232 FLRGSLPWQGLKAATKKQKYDKICEKKVSTP 262
L G P++ + K+ Y +I + + S P
Sbjct: 235 LLVGKPPFE---TSCLKETYIRIKKNEYSVP 262
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE----KFLQEALTMR 94
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 95 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 133
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+SL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 134 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYME 190
Query: 184 DPT 186
D T
Sbjct: 191 DST 193
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 44/197 (22%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 8 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 63
Query: 59 LQGGSKIRLVVFHVD----HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS 114
++ + ++L+ ++II +T YG +
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIIIEFMT---------------YG---------------N 93
Query: 115 LEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173
L D C R++ S +L +A Q+ + +EY+ + F+HRD+ N L+G + + V +
Sbjct: 94 LLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKV 150
Query: 174 IDFGLAKKYRDPTTNRH 190
DFGL++ T H
Sbjct: 151 ADFGLSRLMTGDTXTAH 167
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 14 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE----KFLQEALTMR 69
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 70 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 108
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+SL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 109 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYME 165
Query: 184 DPT 186
D T
Sbjct: 166 DST 168
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE----KFLQEALTMR 68
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 69 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 107
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+SL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 108 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYME 164
Query: 184 DPT 186
D T
Sbjct: 165 DST 167
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDXTLKILDFGLART--AGTSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 259
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 260 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 306
Query: 335 ASRVT 339
A R++
Sbjct: 307 AKRIS 311
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---YRDPTTNRHIPYRENKN 198
I+Y+HS HRD+KP+N L R + + DFG AK+ + TT + PY
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233
Query: 199 LTGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
+ G +Y SC D SLG + L G P+
Sbjct: 234 VLGPEKYDKSC------------DXWSLGVIXYILLCGYPPF 263
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 32/240 (13%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 140 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 197 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 245
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 246 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 297
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL--PASRVT 339
+ RP Y L F LF + D + LK Q + S+ L+ PA R++
Sbjct: 298 ----VENRPKYAGLT--FPKLFPDSLFPAD--SEHNKLKASQARDLLSKMLVIDPAKRIS 349
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 10 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 65
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 99
Query: 119 FVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R++ S +L +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 156
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 157 LSRLMTGDTYTAH 169
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 10 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 65
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 99
Query: 119 FVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R++ S +L +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 156
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 157 LSRLMTGDTYTAH 169
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 32/240 (13%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 140 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 197 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 245
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 246 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 297
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL--PASRVT 339
+ RP Y L F LF + D + LK Q + S+ L+ PA R++
Sbjct: 298 ----VENRPKYAGLT--FPKLFPDSLFPAD--SEHNKLKASQARDLLSKMLVIDPAKRIS 349
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE----KFLQEALTMR 66
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 67 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 105
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+SL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 106 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYME 162
Query: 184 DPT 186
D T
Sbjct: 163 DST 165
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE----KFLQEALTMR 71
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 72 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 110
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+SL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 111 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYME 167
Query: 184 DPT 186
D T
Sbjct: 168 DST 170
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ RK+G G + E+F +V+ NE +KI K + + G + ++L+
Sbjct: 35 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 94
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
D H+ T P++ + V+ D +L P+L D + +
Sbjct: 95 DIVRDQ---HSKT----------PSLIFEYVNNTD----FKVLYPTLTD--------YDI 129
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ + +++ ++Y HS+G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 130 RYYIY---ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 178
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE----KFLQEALTMR 66
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 67 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 105
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+SL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 106 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYME 162
Query: 184 DPT 186
D T
Sbjct: 163 DST 165
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 97/271 (35%), Gaps = 67/271 (24%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+Y GR +G G F + + + +DT E+ A K+ +L+ K ++
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSM-------------LLKPHQKEKM 89
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-----C 122
+ IH DN V+ G +D FVY C
Sbjct: 90 ST----EIAIHK---------------------SLDNPHVVGFHGFFEDDDFVYVVLEIC 124
Query: 123 RRKFSLK-----------TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
RR+ L+ Q I ++Y+H+ +HRD+K N + V
Sbjct: 125 RRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDV 181
Query: 172 YIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY 231
I DFGLA K K L GT Y + S D+ SLG +L
Sbjct: 182 KIGDFGLATKI-------EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 232 FLRGSLPWQGLKAATKKQKYDKICEKKVSTP 262
L G P++ + K+ Y +I + + S P
Sbjct: 235 LLVGKPPFE---TSCLKETYIRIKKNEYSVP 262
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ RK+G G + E+F +V+ NE +KI K + + G + ++L+
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 93
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
D H+ T P++ + V+ D +L P+L D + +
Sbjct: 94 DIVRDQ---HSKT----------PSLIFEYVNNTD----FKVLYPTLTD--------YDI 128
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ + +++ ++Y HS+G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 129 RYYIY---ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 177
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 25/148 (16%)
Query: 103 DNVLVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160
D +L+ +L+ +LF + K SL + Q++ + Y+HS H D+KP+N
Sbjct: 88 DVILIGELVAGG--ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN- 144
Query: 161 LMGLGRKANQ--VYIIDFGLAKKYRDPTTNRHIPY-RENKNLTGTARYASCNT----HLG 213
+M L R + + IIDFGLA K I + E KN+ GT + + LG
Sbjct: 145 IMLLDRNVPKPRIKIIDFGLAHK---------IDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 214 IEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+E D+ S+G + L G+ P+ G
Sbjct: 196 LEA----DMWSIGVITYILLSGASPFLG 219
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIR 66
+ +LGR IG G FG++ ++ N +AV I+ + E K LQ +R
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE----KFLQEALTMR 63
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RK 125
DH I +K GV E+ V ++ L +L +L + + RK
Sbjct: 64 ----QFDHPHI----------------VKLIGVITENPVWIIMELC-TLGELRSFLQVRK 102
Query: 126 FSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183
+SL ++++ A Q+ + Y+ S+ F+HRDI N L+ + V + DFGL++
Sbjct: 103 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYME 159
Query: 184 DPT 186
D T
Sbjct: 160 DST 162
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT--TNRHIPYRENKNL 199
I+++HS HRD+KP+N L K + + DFG AK+ T + PY +
Sbjct: 122 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEV 181
Query: 200 TGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
G +Y SC D+ SLG ++ L G P+
Sbjct: 182 LGPEKYDKSC------------DMWSLGVIMYILLCGFPPF 210
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT--TNRHIPYRENKNL 199
I+++HS HRD+KP+N L K + + DFG AK+ T + PY +
Sbjct: 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEV 200
Query: 200 TGTARY-ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
G +Y SC D+ SLG ++ L G P+
Sbjct: 201 LGPEKYDKSC------------DMWSLGVIMYILLCGFPPF 229
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 124/308 (40%), Gaps = 52/308 (16%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE+++ + VAVK T + L EA V K
Sbjct: 29 MERTDITMKHKLG----GGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 84
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + L F +P YG +L D
Sbjct: 85 IKHPNLVQLLG-------VCTLEPPFYIVTEYMP----YG---------------NLLDY 118
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 119 LRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHVVKVADFG 175
Query: 178 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR--G 235
L++ T H + T A NT S + D+ + G VLL+ + G
Sbjct: 176 LSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NTF-----SIKSDVWAFG-VLLWEIATYG 228
Query: 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295
P+ G+ + Q YD + EK C P + C + RP +
Sbjct: 229 MSPYPGIDLS---QVYD-LLEKGYRMEQPEGC---PPKVYELMRACWKWSPADRPSFAET 281
Query: 296 KRLFHDLF 303
+ F +F
Sbjct: 282 HQAFETMF 289
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 8 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 63
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 97
Query: 119 FVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R++ S +L +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 154
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 155 LSRLMTGDTFTAH 167
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 39/201 (19%)
Query: 15 IGSGSFGEIFLASHVDTNEIVAVK--IENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
+G GS+G + + DT IVA+K +E+ K V KI K+ + H
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDK--------MVKKIAMREIKLLKQLRHE 84
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
+ +++ L + +WY LV + + ++ D + V
Sbjct: 85 N--LVNLLEVCKKKK-------RWY--------LVFEFVDHTILDDLELFPNGLDYQVVQ 127
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK-------YRDP 185
Q+I I + HS +HRDIKP+N L+ ++ V + DFG A+ Y D
Sbjct: 128 KYLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEVYDDE 184
Query: 186 TTNRHIPYRENKNLTGTARYA 206
R YR + L G +Y
Sbjct: 185 VATRW--YRAPELLVGDVKYG 203
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ RK+G G + E+F +V+ NE +KI K + + G + ++L+
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 93
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
D H+ T P++ + V+ D +L P+L D + +
Sbjct: 94 DIVRDQ---HSKT----------PSLIFEYVNNTD----FKVLYPTLTD--------YDI 128
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ + +++ ++Y HS+G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 129 RYYIY---ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 177
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 44/197 (22%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 10 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 65
Query: 59 LQGGSKIRLVVFHVD----HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS 114
++ + ++L+ ++II +T YG +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMT---------------YG---------------N 95
Query: 115 LEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173
L D C R++ S +L +A Q+ + +EY+ + F+HRD+ N L+G + + V +
Sbjct: 96 LLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKV 152
Query: 174 IDFGLAKKYRDPTTNRH 190
DFGL++ T H
Sbjct: 153 ADFGLSRLMTGDTYTAH 169
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ RK+G G + E+F +V+ NE +KI K + + G + ++L+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
D H+ T P++ + V+ D +L P+L D + +
Sbjct: 93 DIVRDQ---HSKT----------PSLIFEYVNNTD----FKVLYPTLTD--------YDI 127
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ + +++ ++Y HS+G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 128 RYYIY---ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ RK+G G + E+F +V+ NE +KI K + + G + ++L+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
D H+ T P++ + V+ D +L P+L D + +
Sbjct: 93 DIVRDQ---HSKT----------PSLIFEYVNNTD----FKVLYPTLTD--------YDI 127
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ + +++ ++Y HS+G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 128 RYYIY---ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 105/291 (36%), Gaps = 60/291 (20%)
Query: 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-----LLYEAKV 55
++R+ + +G GSFG++ LA T E+ A+KI + E +V
Sbjct: 13 LDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRV 72
Query: 56 YKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSL 115
+L L H + L + GG
Sbjct: 73 LALLDKPP--FLTQLHSCFQTVDRLYFVMEYVNGG------------------------- 105
Query: 116 EDLFVYCRR--KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173
DL + ++ KF + A ++ + ++H RG ++RD+K DN ++ + I
Sbjct: 106 -DLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD---SEGHIKI 161
Query: 174 IDFGLAKKY-RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF 232
DFG+ K++ D T R GT Y + + D + G +L
Sbjct: 162 ADFGMCKEHMMDGVTTRE--------FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM 213
Query: 233 LRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV------LCKS----HPAE 273
L G P+ G + + + I E VS P + +CK HPA+
Sbjct: 214 LAGQPPFDG---EDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAK 261
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ RK+G G + E+F +V+ NE +KI K + + G + ++L+
Sbjct: 54 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 113
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
D H+ T P++ + V+ D +L P+L D + +
Sbjct: 114 DIVRDQ---HSKT----------PSLIFEYVNNTD----FKVLYPTLTD--------YDI 148
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ + +++ ++Y HS+G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 149 RYYIY---ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 197
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ RK+G G + E+F +V+ NE +KI K + + G + ++L+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
D H+ T P++ + V+ D +L P+L D + +
Sbjct: 93 DIVRDQ---HSKT----------PSLIFEYVNNTD----FKVLYPTLTD--------YDI 127
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ + +++ ++Y HS+G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 128 RYYIY---ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 103 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 160 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 208
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 209 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 260
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 261 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 307
Query: 335 ASRVT 339
A R++
Sbjct: 308 AKRIS 312
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAV-KIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GS G + +A+ + ++VAV K++ + +LL+ V I++ +V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV--IMRDYQHENVVEMYN 215
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
+++ L ++ GG +L D+ + R +
Sbjct: 216 SYLVGDELWVVMEFLEGG-----------------------ALTDIVTHTRMNEEQIAAV 252
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
LA ++ + +H++G +HRDIK D+ L+ +V + DFG + ++ +P
Sbjct: 253 CLA--VLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ-----VSKEVP 302
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
R K L GT + + + D+ SLG +++ + G P+
Sbjct: 303 RR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 44/197 (22%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 10 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 65
Query: 59 LQGGSKIRLVVFHVD----HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS 114
++ + ++L+ ++II +T YG +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMT---------------YG---------------N 95
Query: 115 LEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173
L D C R++ S +L +A Q+ + +EY+ + F+HRD+ N L+G + + V +
Sbjct: 96 LLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKV 152
Query: 174 IDFGLAKKYRDPTTNRH 190
DFGL++ T H
Sbjct: 153 ADFGLSRLMTGDTYTAH 169
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 259
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 260 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 306
Query: 335 ASRVT 339
A R++
Sbjct: 307 AKRIS 311
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 15 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 70
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 104
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 161
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 162 LSRLMTGDTXTAH 174
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 96 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 152
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 153 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 201
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 202 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 253
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 254 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 300
Query: 335 ASRVT 339
A R++
Sbjct: 301 AKRIS 305
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 103 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 160 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 208
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 209 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 260
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 261 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 307
Query: 335 ASRVT 339
A R++
Sbjct: 308 AKRIS 312
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G+FG++ +A V ++ VAVK+ E + ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 89
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + IIH L G + I Y G + P +E D
Sbjct: 90 EMEMMKMIGKHKN--IIHLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFG 202
Query: 178 LAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ Y TTN +P K + A + TH + D+ S G VL++
Sbjct: 203 LARDINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 251
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 252 IFTLGGSPYPGI 263
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 101 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 157
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 158 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 206
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 207 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 258
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 259 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 305
Query: 335 ASRVT 339
A R++
Sbjct: 306 AKRIS 310
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ RK+G G + E+F +V+ NE +KI K + + G + ++L+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
D H+ T P++ + V+ D +L P+L D + +
Sbjct: 93 DIVRDQ---HSKT----------PSLIFEYVNNTD----FKVLYPTLTD--------YDI 127
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ + +++ ++Y HS+G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 128 RYYIY---ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D F R+ +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD---------------FKQLRQTLTD 130
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ +++ ++Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 95 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 151
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 152 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 200
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 201 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 252
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 253 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 299
Query: 335 ASRVT 339
A R++
Sbjct: 300 AKRIS 304
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 102 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 159 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 207
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 259
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 260 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 306
Query: 335 ASRVT 339
A R++
Sbjct: 307 AKRIS 311
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y++ RK+G G + E+F +V+ NE +KI K + + G + ++L+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
D H+ T P++ + V+ D +L P+L D + +
Sbjct: 93 DIVRDQ---HSKT----------PSLIFEYVNNTD----FKVLYPTLTD--------YDI 127
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+ + +++ ++Y HS+G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 128 RYYIY---ELLKALDYCHSQGIMHRDVKPHNVM--IDHELRKLRLIDWGLAEFY 176
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 118/307 (38%), Gaps = 64/307 (20%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK-IENSGTK--HPQLLYEAKVYKILQGGSKIRLVVF 70
++GSG+ G+++ T ++AVK + SG K + ++L + V ++
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV-----------VLKS 80
Query: 71 HVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKT 130
H I+ ++T D + ++L+G E L + +
Sbjct: 81 HDCPYIVQCFGTFITNT---------------DVFIAMELMGTCAEKLKKRMQGPIPERI 125
Query: 131 VLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 189
+ + ++ + Y+ + G +HRD+KP N L+ + Q+ + DFG++ + D
Sbjct: 126 LGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGQIKLCDFGISGRLVDDKAK- 181
Query: 190 HIPYRENKNLTGTARYASCNTHLGIEQ-----------SRRDDLESLGYVLLYFLRGSLP 238
R A C ++ E+ R D+ SLG L+ G P
Sbjct: 182 -------------DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
Query: 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRL 298
++ K T + K+ +++ P+ +F S+ C + +RP Y K L
Sbjct: 229 YKNCK--TDFEVLTKVLQEE--PPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYN--KLL 282
Query: 299 FHDLFSR 305
H R
Sbjct: 283 EHSFIKR 289
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161
+D LV++L+ +L + + + + + L QM+ I+++HS G +HRD+KP N +
Sbjct: 96 QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 152
Query: 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ + + I+DFGLA+ T+ PY T Y + LG+ D
Sbjct: 153 V---KSDCTLKILDFGLARTAG--TSFMMTPY------VVTRYYRAPEVILGMGYKENVD 201
Query: 222 LESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYC 281
+ S+G ++ +R + + G +++K+ E ++ TP K +Y
Sbjct: 202 IWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIE-QLGTPCPEFMKKLQPTVRNY---- 253
Query: 282 QSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL-------P 334
+ RP Y L F LF + D ++ + + ++++DLL P
Sbjct: 254 ----VENRPKYAGLT--FPKLFPDSLFPADS-------EHNKLKASQARDLLSKMLVIDP 300
Query: 335 ASRVT 339
A R++
Sbjct: 301 AKRIS 305
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAV-KIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GS G + +A+ + ++VAV K++ + +LL+ V I++ +V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV--IMRDYQHENVVEMYN 138
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
+++ L ++ GG +L D+ + R +
Sbjct: 139 SYLVGDELWVVMEFLEGG-----------------------ALTDIVTHTRMNEEQIAAV 175
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
LA ++ + +H++G +HRDIK D+ L+ +V + DFG + ++ +P
Sbjct: 176 CLA--VLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ-----VSKEVP 225
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
R K L GT + + + D+ SLG +++ + G P+
Sbjct: 226 RR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 49/253 (19%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
LG+ +G G+FG++ LA + ++ VAVK+ S E + ++
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEME 70
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC- 122
++++ H + II+ L G + I Y G + P LE YC
Sbjct: 71 MMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLE----YCY 122
Query: 123 ------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
+ S K ++ A Q+ +EY+ S+ +HRD+ N L+ + N + I DF
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADF 179
Query: 177 GLAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY 231
GLA+ Y TTN +P K + A + TH + D+ S G VLL+
Sbjct: 180 GLARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFG-VLLW 228
Query: 232 --FLRGSLPWQGL 242
F G P+ G+
Sbjct: 229 EIFTLGGSPYPGV 241
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 49/253 (19%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
LG+ +G G+FG++ LA + ++ VAVK+ S E + ++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEME 85
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC- 122
++++ H + II+ L G + I Y G + P LE YC
Sbjct: 86 MMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLE----YCY 137
Query: 123 ------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
+ S K ++ A Q+ +EY+ S+ +HRD+ N L+ + N + I DF
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADF 194
Query: 177 GLAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY 231
GLA+ Y TTN +P K + A + TH + D+ S G VLL+
Sbjct: 195 GLARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFG-VLLW 243
Query: 232 --FLRGSLPWQGL 242
F G P+ G+
Sbjct: 244 EIFTLGGSPYPGV 256
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 217 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 272
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 273 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 306
Query: 119 FVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R++ S +L +A Q+ + +EY+ + F+HR++ N L+G + + V + DFG
Sbjct: 307 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFG 363
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 364 LSRLMTGDTYTAH 376
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 15 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 70
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 104
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 161
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 162 LSRLMTGDTYTAH 174
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 14 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 69
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 70 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 103
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 104 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 160
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 161 LSRLMTGDTYTAH 173
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 106 LVLDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163
LV DL+ +LF Y K +L K + ++ + ++H+ +HRD+KP+N L+
Sbjct: 177 LVFDLMRKG--ELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD 234
Query: 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYAS-----CN---THLGIE 215
Q+ + DFG + P + + L GT Y + C+ TH G
Sbjct: 235 ---DNMQIRLSDFGFSCHLE--------PGEKLRELCGTPGYLAPEILKCSMDETHPGY- 282
Query: 216 QSRRDDLESLGYVLLYFLRGSLPW 239
+ DL + G +L L GS P+
Sbjct: 283 -GKEVDLWACGVILFTLLAGSPPF 305
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 138 MIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENK 197
+I IEY+H + +HRDIKP N L+G + + I DFG++ +++
Sbjct: 146 LIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKGSDALL-------S 195
Query: 198 NLTGTARY---ASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
N GT + S + I + D+ ++G L F+ G P+
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 44/197 (22%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 11 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 66
Query: 59 LQGGSKIRLVVFHVD----HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS 114
++ + ++L+ ++II +T YG +
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIIIEFMT---------------YG---------------N 96
Query: 115 LEDLFVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173
L D C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V +
Sbjct: 97 LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKV 153
Query: 174 IDFGLAKKYRDPTTNRH 190
DFGL++ T H
Sbjct: 154 ADFGLSRLMTGDTXTAH 170
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 15 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 70
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 104
Query: 119 FVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R++ + +L +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 161
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 162 LSRLMTGDTYTAH 174
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 12 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 67
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 101
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 158
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 159 LSRLMTGDTYTAH 171
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP-----TTNRHI 191
Q++ + Y+HS+G +HRD+KP N + R V I DFGLAK ++++
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESR---NVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 192 PYRENKNLT---GTARYASCNTHLGI-EQSRRDDLESLGYVLL 230
P + NLT GTA Y + G + + D+ SLG +
Sbjct: 181 P-GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 18/78 (23%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK--------------- 181
QM+ I+++HS G +HRD+KP N ++ + + I+DFGLA+
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY 195
Query: 182 YRDPTTNRHIPYRENKNL 199
YR P + Y+EN +L
Sbjct: 196 YRAPEVILGMGYKENVDL 213
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFL-MGLGRKANQVYIIDFGLAKKYRDP 185
Q++ I Y+H+ LHRD+KP N L MG G + +V I D G A+ + P
Sbjct: 136 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAV-KIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GS G + +A+ + ++VAV K++ + +LL+ V I++ +V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV--IMRDYQHENVVEMYN 95
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
+++ L ++ GG +L D+ + R +
Sbjct: 96 SYLVGDELWVVMEFLEGG-----------------------ALTDIVTHTRMNEEQIAAV 132
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
LA ++ + +H++G +HRDIK D+ L+ +V + DFG + ++ +P
Sbjct: 133 CLA--VLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ-----VSKEVP 182
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
R K L GT + + + D+ SLG +++ + G P+
Sbjct: 183 RR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
QM+ I+++HS G +HRD+KP N ++ + + I+DFGLA+ T+ P
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAG--TSFMMTPE--- 185
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
T Y + LG+ D+ S+G ++ ++G + + G +++K+ E
Sbjct: 186 ---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG---TDHIDQWNKVIE 239
Query: 257 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG--FLKRLFHDLF 303
++ TP K +Y + RP Y ++LF D+
Sbjct: 240 -QLGTPCPEFMKKLQPTVRTY--------VENRPKYAGYSFEKLFPDVL 279
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP-----TTNRHI 191
Q++ + Y+HS+G +HRD+KP N + R V I DFGLAK ++++
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESR---NVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 192 PYRENKNLT---GTARYASCNTHLGI-EQSRRDDLESLGYVLL 230
P + NLT GTA Y + G + + D+ SLG +
Sbjct: 181 P-GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAV-KIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GS G + +A+ + ++VAV K++ + +LL+ V I++ +V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV--IMRDYQHENVVEMYN 93
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
+++ L ++ GG +L D+ + R +
Sbjct: 94 SYLVGDELWVVMEFLEGG-----------------------ALTDIVTHTRMNEEQIAAV 130
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
LA ++ + +H++G +HRDIK D+ L+ +V + DFG + ++ +P
Sbjct: 131 CLA--VLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ-----VSKEVP 180
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
R K L GT + + + D+ SLG +++ + G P+
Sbjct: 181 RR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 12 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 67
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 101
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 158
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 159 LSRLMTGDTYTAH 171
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 18/78 (23%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK--------------- 181
QM+ I+++HS G +HRD+KP N ++ + + I+DFGLA+
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY 184
Query: 182 YRDPTTNRHIPYRENKNL 199
YR P + Y+EN +L
Sbjct: 185 YRAPEVILGMGYKENVDL 202
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 18/78 (23%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK--------------- 181
QM+ I+++HS G +HRD+KP N ++ + + I+DFGLA+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRY 190
Query: 182 YRDPTTNRHIPYRENKNL 199
YR P + Y+EN +L
Sbjct: 191 YRAPEVILGMGYKENVDL 208
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 23 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 78
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 79 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 112
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 113 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 169
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 170 LSRLMTGDTYTAH 182
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 43/258 (16%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG--TKHPQLLYEAKVYKILQGGSKIR 66
Y+L IG G+F + + +T + AVKI + T P L E L+ + I
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED-----LKREASIC 80
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
++ H H + ++ + + G+ + + +DG D L +++ + + FVY
Sbjct: 81 HMLKHP-----HIVELLETYSSDGMLYMVFEFMDGAD--LCFEIVKRA-DAGFVY----- 127
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
S Q++ + Y H +HRD+KP+N L+ + V + DFG+A + +
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE-- 185
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD------DLESLGYVLLYFLRGSLPWQ 240
L R + + + E +R+ D+ G +L L G LP+
Sbjct: 186 ----------SGLVAGGRVGTPH-FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234
Query: 241 GLKAATKKQKYDKICEKK 258
G TK++ ++ I + K
Sbjct: 235 G----TKERLFEGIIKGK 248
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG+ I +
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKIL-ENLRGGTNIIKL 98
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ V + ++F ++ D + +L ++Y
Sbjct: 99 IDTVKDPVSKTPALVFEY------------INNTDFKQLYQILTDFDIRFYMY------- 139
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+++ ++Y HS+G +HRD+KP N ++ +K ++ +ID+GLA+ Y
Sbjct: 140 --------ELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFY 183
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 10 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 65
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 99
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 100 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 156
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 157 LSRLMTGDTYTAH 169
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 44/197 (22%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 15 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 70
Query: 59 LQGGSKIRLVVFHVD----HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS 114
++ + ++L+ ++II +T YG +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIIIEFMT---------------YG---------------N 100
Query: 115 LEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173
L D C R++ + +L +A Q+ + +EY+ + F+HRD+ N L+G + + V +
Sbjct: 101 LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKV 157
Query: 174 IDFGLAKKYRDPTTNRH 190
DFGL++ T H
Sbjct: 158 ADFGLSRLMTGDTYTAH 174
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 38/180 (21%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y + IG GS+G ++LA +T + VA+K KV ++ + +
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIK---------------KVNRMFEDLIDCKR- 71
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
I+ +TI+ + L I+ Y + D++L D L LE ++ F
Sbjct: 72 -------ILREITIL--NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF-- 120
Query: 129 KTVLMLADQMIARIEY--------VHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
KT + L ++ I I Y +H G +HRD+KP N L+ + V + DFGLA+
Sbjct: 121 KTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN---QDCSVKVCDFGLAR 177
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAV-KIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GS G + +A+ + ++VAV K++ + +LL+ V I++ +V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV--IMRDYQHENVVEMYN 84
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
+++ L ++ GG +L D+ + R +
Sbjct: 85 SYLVGDELWVVMEFLEGG-----------------------ALTDIVTHTRMNEEQIAAV 121
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
LA ++ + +H++G +HRDIK D+ L+ +V + DFG + ++ +P
Sbjct: 122 CLA--VLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ-----VSKEVP 171
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
R K L GT + + + D+ SLG +++ + G P+
Sbjct: 172 RR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 37/242 (15%)
Query: 11 LGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQLLY------EAKVYKIL 59
L R++G G+FG++FLA S +VAVK K P L EA++ L
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVK----ALKDPTLAARKDFQREAELLTNL 74
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF 119
Q ++ D L ++F G N K+ G D ++++D G +
Sbjct: 75 QHEHIVKFYGVCGDG---DPLIMVFEYMKHGDLN-KFLRAHGPDAMILVD--GQPRQ--- 125
Query: 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKAN-QVYIIDFGL 178
+ + L +L +A Q+ + + Y+ S+ F+HRD+ N L+G AN V I DFG+
Sbjct: 126 --AKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG----ANLLVKIGDFGM 179
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL-YFLRGSL 237
+ RD + + YR + R+ + + + + D+ S G +L F G
Sbjct: 180 S---RDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234
Query: 238 PW 239
PW
Sbjct: 235 PW 236
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 10 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 65
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 99
Query: 119 FVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R++ + +L +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 100 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 156
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 157 LSRLMTGDTYTAH 169
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 36/183 (19%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 12 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 67
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 101
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 158
Query: 178 LAK 180
L++
Sbjct: 159 LSR 161
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 36/183 (19%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 11 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 66
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 100
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HRD+ N L+G + + V + DFG
Sbjct: 101 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFG 157
Query: 178 LAK 180
L++
Sbjct: 158 LSR 160
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 138 MIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENK 197
M+ + +H G +H D+KP NFL+ G + +IDFG+A + + P +
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQ-PDXXXVV----KD 186
Query: 198 NLTGTARYASCNTHLGIEQSRRD-----------DLESLGYVLLYFLRGSLPWQGL 242
+ GT Y + SR + D+ SLG +L Y G P+Q +
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAV-KIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
KIG GS G + +A+ + ++VAV K++ + +LL+ V I++ +V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV--IMRDYQHENVVEMYN 88
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVL 132
+++ L ++ GG +L D+ + R +
Sbjct: 89 SYLVGDELWVVMEFLEGG-----------------------ALTDIVTHTRMNEEQIAAV 125
Query: 133 MLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192
LA ++ + +H++G +HRDIK D+ L+ +V + DFG + ++ +P
Sbjct: 126 CLA--VLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ-----VSKEVP 175
Query: 193 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
R K L GT + + + D+ SLG +++ + G P+
Sbjct: 176 RR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 96/251 (38%), Gaps = 60/251 (23%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-LLYEAKVYKILQGGSKIRLVVFH 71
RK+G G+FG + L H+D + AVK+ + K+ + EA + K +Q
Sbjct: 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQ----------- 89
Query: 72 VDHVIIHALTIIFSSTLGGIPNIKWYG--VDGEDNVLVLDLLGPSLEDLFVYCRRK-FSL 128
+ + +K++G + + L+ + LGPSL ++ F +
Sbjct: 90 -------------NDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHI 136
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG--------------LGRKANQVY-- 172
+ + + +++ + Y+ H D+KP+N L+ K Q+Y
Sbjct: 137 EDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRT 196
Query: 173 ------IIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLG 226
+IDFG A D + ++ T +Y + L + D+ S G
Sbjct: 197 KSTGIKLIDFGCATFKSD----------YHGSIINTRQYRAPEVILNLGWDVSSDMWSFG 246
Query: 227 YVLLYFLRGSL 237
VL GSL
Sbjct: 247 CVLAELYTGSL 257
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 94 IKWYGVDGEDN----VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR 148
+K+ G+ ED L+++ L SL++ + K +LK L A Q+ ++Y+ SR
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 149 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++HRD+ N L+ +QV I DFGL K
Sbjct: 146 QYVHRDLAARNVLV---ESEHQVKIGDFGLTK 174
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 42/206 (20%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK-----IENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
KIG G++G ++ A + T E+VA+K E G + E + K L + ++L+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-TAIREISLLKELNHPNIVKLL 71
Query: 69 -VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
V H ++ L ++F ++ +D +D + L G L
Sbjct: 72 DVIHTEN----KLYLVF----------EFLSMDLKDFMDASALTGIPLP----------L 107
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT- 186
+K+ L Q++ + + HS LHRD+KP N L+ + + DFGLA+ + P
Sbjct: 108 IKSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVR 161
Query: 187 TNRH----IPYRENKNLTGTARYASC 208
T H + YR + L G Y++
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTA 187
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG+ I +
Sbjct: 45 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKIL-ENLRGGTNIIKL 103
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ V + ++F ++ D + +L ++Y
Sbjct: 104 IDTVKDPVSKTPALVFEY------------INNTDFKQLYQILTDFDIRFYMY------- 144
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+++ ++Y HS+G +HRD+KP N ++ +K ++ +ID+GLA+ Y
Sbjct: 145 --------ELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFY 188
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 42/206 (20%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK-----IENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
KIG G++G ++ A + T E+VA+K E G + E + K L + ++L+
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-TAIREISLLKELNHPNIVKLL 70
Query: 69 -VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
V H ++ L ++F ++ +D +D + L G L
Sbjct: 71 DVIHTEN----KLYLVF----------EFLSMDLKDFMDASALTGIPLP----------L 106
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT- 186
+K+ L Q++ + + HS LHRD+KP N L+ + + DFGLA+ + P
Sbjct: 107 IKSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVR 160
Query: 187 TNRH----IPYRENKNLTGTARYASC 208
T H + YR + L G Y++
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTA 186
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + T + +S L GIP L L+
Sbjct: 73 VIHTENKLYLV-FEFLHQDLK--TFMDASALTGIP---------------LPLI------ 108
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 109 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 151
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 101/254 (39%), Gaps = 56/254 (22%)
Query: 4 IIGVKYKLGRKIGSGSFGEIF-LASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
++ +Y++ +G G+FG++ H VAVKI + ++ +
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCE-----------AAR 59
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL---- 118
S+I+ V+ H T +ST + ++W+ G +V +LLG S D
Sbjct: 60 SEIQ--------VLEHLNTTDPNSTFRCVQMLEWFEHHGH-ICIVFELLGLSTYDFIKEN 110
Query: 119 -FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM-----------GLGR 166
F+ F L + +A Q+ + ++HS H D+KP+N L + R
Sbjct: 111 GFL----PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR 166
Query: 167 KAN-----QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221
+ ++DFG A Y D + L T Y + L + S+ D
Sbjct: 167 DERTLINPDIKVVDFGSA-TYDD---------EHHSTLVSTRHYRAPEVILALGWSQPCD 216
Query: 222 LESLGYVLLYFLRG 235
+ S+G +L+ + G
Sbjct: 217 VWSIGCILIEYYLG 230
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 26/177 (14%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLA-SHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
+G +Y + IG G++G + A HV + KI +E + Y +
Sbjct: 41 VGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP---------FEHQTY-CQRTLR 90
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
+I++++ +I I+ +STL + D +V DL+ L L
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAM----------RDVYIVQDLMETDLYKLLK--S 138
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ S + Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 139 QQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLIN---TTCDLKICDFGLAR 192
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 137
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 138 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 30/173 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQL-LYEAKVYKILQGGS--- 63
+Y + RK+G G F ++L+ + + VA+K+ S + + L E ++ K ++
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 97
Query: 64 -KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+VV +D + K GV+G +V ++LG L +
Sbjct: 98 PNREMVVQLLD-------------------DFKISGVNGTHICMVFEVLGHHLLKWIIKS 138
Query: 123 R-RKFSLKTVLMLADQMIARIEYVHSRG-FLHRDIKPDNFLMGLGRKANQVYI 173
+ L V + Q++ ++Y+H++ +H DIKP+N L+ + N+ YI
Sbjct: 139 NYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSV----NEQYI 187
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 106/283 (37%), Gaps = 74/283 (26%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVA---VKIENSGTKHPQLLYEAKVYKILQGGSK 64
++K K+G+G++ ++ + T VA VK+++ + E + K L+ +
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI 65
Query: 65 IRLV-VFHVDHVIIHALTIIF------------SSTLGGIPNIKWYGVDGEDNVLVLDLL 111
+RL V H ++ LT++F S T+G P
Sbjct: 66 VRLYDVIHTEN----KLTLVFEFMDNDLKKYMDSRTVGNTP------------------- 102
Query: 112 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171
R L V Q++ + + H LHRD+KP N L+ K Q+
Sbjct: 103 ------------RGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN---KRGQL 147
Query: 172 YIIDFGLAKKYRDPTTN-----RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLG 226
+ DFGLA+ + P + YR L G+ Y++ D+ S G
Sbjct: 148 KLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTS-----------IDIWSCG 196
Query: 227 YVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 269
+L + G + L T ++ K+ + TP E L S
Sbjct: 197 CILAEMITG----KPLFPGTNDEEQLKLIFDIMGTPNESLWPS 235
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 101/238 (42%), Gaps = 38/238 (15%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN-SGTKHPQLLYEAKVYKILQGGSKIRL 67
++L +G+G++G+++ HV T ++ A+K+ + +G + ++ E +L+ S R
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE---INMLKKYSHHRN 82
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP-SLEDLFVYCR-RK 125
+ + I G+ + W LV++ G S+ DL +
Sbjct: 83 IATYYGAFI--------KKNPPGMDDQLW---------LVMEFCGAGSVTDLIKNTKGNT 125
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
+ + + +++ + ++H +HRDIK N L+ + +V ++DFG++ + D
Sbjct: 126 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQL-DR 181
Query: 186 TTNRHIPYRENKNLTGTARYA-----SCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T R GT + +C+ + + DL SLG + G+ P
Sbjct: 182 TVGRR------NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 49/256 (19%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVK-IENSGTKH--PQLLYEAKVYK 57
K LG+ +G G+FG++ +A V ++ VAVK +++ T+ L+ E ++ K
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGG-IPNIKWYGVDGEDNVLVLDLLGPSLE 116
++ I +T++ + T G + I Y G + P +E
Sbjct: 96 MIGKHKNI--------------ITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 117 ---DLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173
D+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKI 198
Query: 174 IDFGLAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYV 228
DFGLA+ Y TTN +P K + A + TH + D+ S G V
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-V 247
Query: 229 LLY--FLRGSLPWQGL 242
L++ F G P+ G+
Sbjct: 248 LMWEIFTLGGSPYPGI 263
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 44/207 (21%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK-----IENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
KIG G++G ++ A + T E+VA+K E G + E + K L + ++L+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS-TAIREISLLKELNHPNIVKLL 68
Query: 69 -VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF-VYCRRKF 126
V H ++ K Y LV + L L+D
Sbjct: 69 DVIHTEN--------------------KLY--------LVFEFLHQDLKDFMDASALTGI 100
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
L + Q++ + + HS LHRD+KP+N L+ + + DFGLA+ + P
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLIN---TEGAIKLADFGLARAFGVPV 157
Query: 187 -TNRH----IPYRENKNLTGTARYASC 208
T H + YR + L G Y++
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTA 184
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 94 IKWYGVDGEDN----VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR 148
+K+ G+ ED L+++ L SL++ + K +LK L A Q+ ++Y+ SR
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 149 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++HRD+ N L+ +QV I DFGL K
Sbjct: 134 QYVHRDLAARNVLV---ESEHQVKIGDFGLTK 162
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 256 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 311
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 312 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 345
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HR++ N L+G + + V + DFG
Sbjct: 346 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFG 402
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 403 LSRLMTGDTYTAH 415
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
++ R +G GSFG++ LA +T ++ AVK+ K +L + V + ++ R++
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKV----LKKDVILQDDDVECTM---TEKRIL 77
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+H + L F + P+ ++ V++ + + R+F
Sbjct: 78 SLARNHPFLTQLFCCFQT-----PDRLFF---------VMEFVNGGDLMFHIQKSRRFDE 123
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181
A ++I+ + ++H +G ++RD+K DN L+ + DFG+ K+
Sbjct: 124 ARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCKE 173
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 30/173 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQL-LYEAKVYKILQGGS--- 63
+Y + RK+G G F ++L+ + + VA+K+ S + + L E ++ K ++
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 81
Query: 64 -KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+VV +D + K GV+G +V ++LG L +
Sbjct: 82 PNREMVVQLLD-------------------DFKISGVNGTHICMVFEVLGHHLLKWIIKS 122
Query: 123 R-RKFSLKTVLMLADQMIARIEYVHSRG-FLHRDIKPDNFLMGLGRKANQVYI 173
+ L V + Q++ ++Y+H++ +H DIKP+N L+ + N+ YI
Sbjct: 123 NYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSV----NEQYI 171
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 152 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTH 211
HRD+KP+N L+ A Y++DFG+A TT+ + + N GT Y +
Sbjct: 157 HRDVKPENILVSADDFA---YLVDFGIASA----TTDEKL--TQLGNTVGTLYYXAPERF 207
Query: 212 LGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241
+ R D+ +L VL L GS P+QG
Sbjct: 208 SESHATYRADIYALTCVLYECLTGSPPYQG 237
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 1 MERI-IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKI 58
MER I +K+KLG G +GE++ + VAVK T + L EA V K
Sbjct: 214 MERTDITMKHKLG----GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE 269
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
++ + ++L+ + +T + YG +L D
Sbjct: 270 IKHPNLVQLLGVCTREPPFYIITEFMT-----------YG---------------NLLDY 303
Query: 119 FVYCRRKFSLKTVLM-LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
C R+ VL+ +A Q+ + +EY+ + F+HR++ N L+G + + V + DFG
Sbjct: 304 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFG 360
Query: 178 LAKKYRDPTTNRH 190
L++ T H
Sbjct: 361 LSRLMTGDTYTAH 373
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 137
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 138 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 38/184 (20%)
Query: 11 LGRKIGSGSFGEIF---LASHVDTNEIVAVK---IENSGTKH-PQLLYEAKVYKILQGGS 63
LG+ +G G FG + L T+ VAVK ++NS + + L EA K +
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
IRL L + + GIP +++L + L +Y
Sbjct: 98 VIRL------------LGVCIEMSSQGIPK----------PMVILPFMKYGDLHTYLLYS 135
Query: 123 R-----RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
R + L+T+L + +EY+ +R FLHRD+ N ++ R V + DFG
Sbjct: 136 RLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML---RDDMTVCVADFG 192
Query: 178 LAKK 181
L+KK
Sbjct: 193 LSKK 196
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 137
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 138 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 34/183 (18%)
Query: 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI----ENSGTKHPQLLYEAKVYKI 58
R+ Y++ + IG G+FGE+ L H T ++ A+K+ E +E + I
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER--DI 127
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
+ + +V L ++ GG +++L+ S D+
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGD---------------LVNLM--SNYDV 170
Query: 119 FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
R ++ + VL L + +HS GF+HRD+KPDN L+ K+ + + DFG
Sbjct: 171 PEKWARFYTAEVVLAL--------DAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGT 219
Query: 179 AKK 181
K
Sbjct: 220 CMK 222
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 137
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 138 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 94
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 95 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 136
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 137 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 181
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 137
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 138 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 137
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 138 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 18/78 (23%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK--------------- 181
QM+ I+++HS G +HRD+KP N ++ + + I+DFGLA+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRY 190
Query: 182 YRDPTTNRHIPYRENKNL 199
YR P + Y+EN ++
Sbjct: 191 YRAPEVILGMGYKENVDI 208
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 137
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 138 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 96 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 137
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 138 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 182
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 24/211 (11%)
Query: 94 IKWYGVDGEDNVLVLDLLGP--SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFL 151
I+ YGV + ++ L P SL D + F L T+ A Q+ + Y+ S+ F+
Sbjct: 84 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143
Query: 152 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTH 211
HRD+ N L+ + V I DFGL + P + H +E++ + +A C
Sbjct: 144 HRDLAARNLLLA---TRDLVKIGDFGLMRAL--PQNDDHXVMQEHRKVP----FAWCAPE 194
Query: 212 LGIEQ--SRRDDLESLGYVLL-YFLRGSLPWQGLKAATKKQKYDKICEKKVSTP------ 262
+ S D G L F G PW GL + K DK E ++ P
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLPRPEDCPQD 253
Query: 263 ---IEVLCKSHPAEFASYFHYCQSLTFDQRP 290
+ V C +H E F + + +P
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 94
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 95 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 136
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 137 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 181
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 105 VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLA--DQMIARIEYVHSRGFLHRDIKPDNFLM 162
VL+L+ P ++DLF + + +L+ L + Q++ + + H+ G LHRDIK +N L+
Sbjct: 132 VLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
Query: 163 GLGRKANQVYIIDFGLAKKYRD 184
L R ++ +IDFG +D
Sbjct: 191 DLNR--GELKLIDFGSGALLKD 210
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 44 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 100
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 101 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 142
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 143 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 187
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
Y+L RK+G G + E+F A ++ NE V VKI K + + L+GG I
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL-ENLRGGPNII-- 93
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
L I + P + + V+ D L +L D + +F +
Sbjct: 94 ----------TLADIVKDPVSRTPALVFEHVNNTD----FKQLYQTLTDYDI----RFYM 135
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+L D Y HS G +HRD+KP N + + + ++ +ID+GLA+ Y
Sbjct: 136 YEILKALD-------YCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFY 180
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 36/184 (19%)
Query: 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI----ENSGTKHPQLLYEAKVYKI 58
R+ Y++ + IG G+FGE+ L H T ++ A+K+ E +E + I
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER--DI 127
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLED 117
+ + +V L ++ GG DL+ S D
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG------------------DLVNLMSNYD 169
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ R ++ + VL L + +HS GF+HRD+KPDN L+ K+ + + DFG
Sbjct: 170 VPEKWARFYTAEVVLAL--------DAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFG 218
Query: 178 LAKK 181
K
Sbjct: 219 TCMK 222
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ + Y+HS+G +HR++KP N + R V I DFGLAK
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESR---NVKIGDFGLAK 164
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 24/211 (11%)
Query: 94 IKWYGVDGEDNVLVLDLLGP--SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFL 151
I+ YGV + ++ L P SL D + F L T+ A Q+ + Y+ S+ F+
Sbjct: 84 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143
Query: 152 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTH 211
HRD+ N L+ + V I DFGL + P + H +E++ + +A C
Sbjct: 144 HRDLAARNLLLA---TRDLVKIGDFGLMRAL--PQNDDHYVMQEHRKVP----FAWCAPE 194
Query: 212 LGIEQ--SRRDDLESLGYVLL-YFLRGSLPWQGLKAATKKQKYDKICEKKVSTP------ 262
+ S D G L F G PW GL + K DK E ++ P
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLPRPEDCPQD 253
Query: 263 ---IEVLCKSHPAEFASYFHYCQSLTFDQRP 290
+ V C +H E F + + +P
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 24/211 (11%)
Query: 94 IKWYGVDGEDNVLVLDLLGP--SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFL 151
I+ YGV + ++ L P SL D + F L T+ A Q+ + Y+ S+ F+
Sbjct: 78 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 137
Query: 152 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTH 211
HRD+ N L+ + V I DFGL + P + H +E++ + +A C
Sbjct: 138 HRDLAARNLLLA---TRDLVKIGDFGLMRAL--PQNDDHYVMQEHRKVP----FAWCAPE 188
Query: 212 LGIEQ--SRRDDLESLGYVLL-YFLRGSLPWQGLKAATKKQKYDKICEKKVSTP------ 262
+ S D G L F G PW GL + K DK E ++ P
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLPRPEDCPQD 247
Query: 263 ---IEVLCKSHPAEFASYFHYCQSLTFDQRP 290
+ V C +H E F + + +P
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 34/183 (18%)
Query: 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAV----KIENSGTKHPQLLYEAKVYKI 58
R+ Y++ + IG G+FGE+ L H T ++ A+ K E +E + I
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER--DI 122
Query: 59 LQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL 118
+ + +V L ++ GG +++L+ S D+
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGD---------------LVNLM--SNYDV 165
Query: 119 FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
R ++ + VL L + +HS GF+HRD+KPDN L+ K+ + + DFG
Sbjct: 166 PEKWARFYTAEVVLAL--------DAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGT 214
Query: 179 AKK 181
K
Sbjct: 215 CMK 217
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 24/211 (11%)
Query: 94 IKWYGVDGEDNVLVLDLLGP--SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFL 151
I+ YGV + ++ L P SL D + F L T+ A Q+ + Y+ S+ F+
Sbjct: 74 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 152 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTH 211
HRD+ N L+ + V I DFGL + P + H +E++ + +A C
Sbjct: 134 HRDLAARNLLLA---TRDLVKIGDFGLMRAL--PQNDDHXVMQEHRKVP----FAWCAPE 184
Query: 212 LGIEQ--SRRDDLESLGYVLL-YFLRGSLPWQGLKAATKKQKYDKICEKKVSTP------ 262
+ S D G L F G PW GL + K DK E ++ P
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLPRPEDCPQD 243
Query: 263 ---IEVLCKSHPAEFASYFHYCQSLTFDQRP 290
+ V C +H E F + + +P
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQL-LYEAKVYKILQ----GG 62
+Y + RK+G G F ++L + VA+K+ S + + L E K+ K ++
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSD 91
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
+VV +D + K G++G +V ++LG L +
Sbjct: 92 PNKDMVVQLID-------------------DFKISGMNGIHVCMVFEVLGHHLLKWIIKS 132
Query: 123 R-RKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLM 162
+ ++ V + Q++ ++Y+HS+ +H DIKP+N LM
Sbjct: 133 NYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILM 174
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV + + + + +S L GIP L L+
Sbjct: 71 VIHTENKLYLVF---EFLSMDLKKFMDASALTGIP---------------LPLI------ 106
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP+N L+ + + DFG
Sbjct: 107 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPENLLIN---TEGAIKLADFG 149
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGS 63
+ +Y++ + IG GSFG++ A ++ VA+K + N H Q E ++ + L+
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 64 KIRLVVFHVDHVIIHAL-TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
K + +IH L F + + + +LL +L +L
Sbjct: 155 KDNTMN------VIHMLENFTFRNHI----------------CMTFELLSMNLYELIKKN 192
Query: 123 R-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + FSL V A ++ ++ +H +H D+KP+N L+ ++ + +IDFG
Sbjct: 193 KFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFG 247
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 35/174 (20%)
Query: 14 KIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
++G G+FG + L + +T +VAVK +++SG +
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR-------------------- 56
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS--LEDLFVYCRRKF 126
F + I+ AL F G+ YG + LV++ L PS L D R +
Sbjct: 57 DFQREIQILKALHSDFIVKYRGVS----YGPGRQSLRLVMEYL-PSGCLRDFLQRHRARL 111
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+L+ + Q+ +EY+ SR +HRD+ N L+ V I DFGLAK
Sbjct: 112 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAK 162
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV + + + + +S L GIP L L+
Sbjct: 73 VIHTENKLYLVF---EFLSMDLKKFMDASALTGIP---------------LPLI------ 108
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP+N L+ + + DFG
Sbjct: 109 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPENLLIN---TEGAIKLADFG 151
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G+FG++ +A V ++ VAVK+ E + ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EEDLSDLVS 89
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 90 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFG 202
Query: 178 LAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ Y TTN +P K + A + TH + D+ S G VL++
Sbjct: 203 LARDINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 251
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 252 IFTLGGSPYPGI 263
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 71 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 106
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP+N L+ + + DFG
Sbjct: 107 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPENLLIN---TEGAIKLADFG 149
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 35/174 (20%)
Query: 14 KIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
++G G+FG + L + +T +VAVK +++SG +
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR-------------------- 57
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS--LEDLFVYCRRKF 126
F + I+ AL F G+ YG + LV++ L PS L D R +
Sbjct: 58 DFQREIQILKALHSDFIVKYRGVS----YGPGRQSLRLVMEYL-PSGCLRDFLQRHRARL 112
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+L+ + Q+ +EY+ SR +HRD+ N L+ V I DFGLAK
Sbjct: 113 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAK 163
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 72 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 107
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP+N L+ + + DFG
Sbjct: 108 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPENLLIN---TEGAIKLADFG 150
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G+FG++ +A V ++ VAVK+ E + ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 89
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 90 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFG 202
Query: 178 LAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ Y TTN +P K + A + TH + D+ S G VL++
Sbjct: 203 LARDINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 251
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 252 IFTLGGSPYPGI 263
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 35/174 (20%)
Query: 14 KIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
++G G+FG + L + +T +VAVK +++SG +
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR-------------------- 69
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS--LEDLFVYCRRKF 126
F + I+ AL F G+ YG + LV++ L PS L D R +
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVS----YGPGRQSLRLVMEYL-PSGCLRDFLQRHRARL 124
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+L+ + Q+ +EY+ SR +HRD+ N L+ V I DFGLAK
Sbjct: 125 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAK 175
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G+FG++ +A V ++ VAVK+ E + ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 89
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 90 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMRIADFG 202
Query: 178 LAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ Y TTN +P K + A + TH + D+ S G VL++
Sbjct: 203 LARDINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 251
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 252 IFTLGGSPYPGI 263
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 45/251 (17%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
LG+ +G G+FG++ LA + ++ VAVK+ S E + ++
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEME 74
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-- 121
++++ H + II+ L G + I Y G + P LE + Y
Sbjct: 75 MMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLE--YSYNP 128
Query: 122 ---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
+ S K ++ A Q+ +EY+ S+ +HRD+ N L+ + N + I DFGL
Sbjct: 129 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGL 185
Query: 179 AK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY-- 231
A+ Y TTN +P K + A + TH + D+ S G VLL+
Sbjct: 186 ARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFG-VLLWEI 234
Query: 232 FLRGSLPWQGL 242
F G P+ G+
Sbjct: 235 FTLGGSPYPGV 245
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 97 YGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156
Y GE + L P L ++ S V+ L Q++ + Y+H +H D+K
Sbjct: 110 YAAGGE----IFSLCLPELAEMV-------SENDVIRLIKQILEGVYYLHQNNIVHLDLK 158
Query: 157 PDNFLMGLGRKANQVYIIDFGLAKK 181
P N L+ + I+DFG+++K
Sbjct: 159 PQNILLSSIYPLGDIKIVDFGMSRK 183
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 24/211 (11%)
Query: 94 IKWYGVDGEDNVLVLDLLGP--SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFL 151
I+ YGV + ++ L P SL D + F L T+ A Q+ + Y+ S+ F+
Sbjct: 74 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 152 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTH 211
HRD+ N L+ + V I DFGL + P + H +E++ + +A C
Sbjct: 134 HRDLAARNLLLA---TRDLVKIGDFGLMRAL--PQNDDHYVMQEHRKVP----FAWCAPE 184
Query: 212 LGIEQ--SRRDDLESLGYVLL-YFLRGSLPWQGLKAATKKQKYDKICEKKVSTP------ 262
+ S D G L F G PW GL + K DK E ++ P
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLPRPEDCPQD 243
Query: 263 ---IEVLCKSHPAEFASYFHYCQSLTFDQRP 290
+ V C +H E F + + +P
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G+FG++ +A V ++ VAVK+ E + ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 89
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 90 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFG 202
Query: 178 LAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ Y TTN +P K + A + TH + D+ S G VL++
Sbjct: 203 LARDINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 251
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 252 IFTLGGSPYPGI 263
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 24/176 (13%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
+G +Y IG G++G + S D V V I+ Q + + +I K
Sbjct: 23 VGPRYTNLSYIGEGAYG--MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-----K 75
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
I L H + II II + T+ + +D +V DL+ L L +
Sbjct: 76 ILLAFRHEN--IIGINDIIRAPTIEQM----------KDVYIVQDLMETDLYKLLK--TQ 121
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
S + Q++ ++Y+HS LHRD+KP N L+ + + I DFGLA+
Sbjct: 122 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTSDLKICDFGLAR 174
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 94/227 (41%), Gaps = 39/227 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+++ ++G G+FG+++ A + +T+ + A K+ ++ ++ Y ++ +
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID-----------I 87
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ DH I L F N W +L+ G +++ + + R +
Sbjct: 88 LASCDHPNIVKLLDAFYYE-----NNLW--------ILIEFCAGGAVDAVMLELERPLTE 134
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+ ++ Q + + Y+H +HRD+K N L L + + DFG++ K
Sbjct: 135 SQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD---GDIKLADFGVSAK-----NT 186
Query: 189 RHIPYRENKNLTGTARYAS-----CNTHLGIEQSRRDDLESLGYVLL 230
R I R+ + GT + + C T + D+ SLG L+
Sbjct: 187 RXIQRRD--SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 29/169 (17%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
R+IG GSFG ++ A V +E+VA+K ++ Y K Q K + ++ V
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIK---------KMSYSGK-----QSNEKWQDIIKEV 105
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV--LVLDLLGPSLEDLFVYCRRKFSLKT 130
F L I++ G ++ LV++ S DL ++
Sbjct: 106 R----------FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE 155
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
+ + + + Y+HS +HRD+K N L+ + V + DFG A
Sbjct: 156 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSA 201
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G+FG++ +A V ++ VAVK+ E + ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 89
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 90 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFG 202
Query: 178 LAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ Y TTN +P K + A + TH + D+ S G VL++
Sbjct: 203 LARDINNIDYYKNTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 251
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 252 IFTLGGSPYPGI 263
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGS 63
+ +Y++ + IG GSFG++ A ++ VA+K + N H Q E ++ + L+
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 64 KIRLVVFHVDHVIIHAL-TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
K + +IH L F + + + +LL +L +L
Sbjct: 155 KDNTMN------VIHMLENFTFRNHI----------------CMTFELLSMNLYELIKKN 192
Query: 123 R-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + FSL V A ++ ++ +H +H D+KP+N L+ ++ + +IDFG
Sbjct: 193 KFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFG 247
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 94 IKWYGVDGEDNVLVLDLLGP--SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFL 151
I+ YGV + ++ L P SL D + F L T+ A Q+ + Y+ S+ F+
Sbjct: 78 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 137
Query: 152 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTH 211
HRD+ N L+ + V I DFGL + P + H +E++ + +A C
Sbjct: 138 HRDLAARNLLLA---TRDLVKIGDFGLMRAL--PQNDDHYVMQEHRKVP----FAWCAPE 188
Query: 212 LGIEQ--SRRDDLESLGYVLL-YFLRGSLPWQGLKAATKKQKYDKICEK 257
+ S D G L F G PW GL + K DK E+
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 237
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 45/251 (17%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
LG+ +G G+FG++ LA + ++ VAVK+ S E + ++
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEME 77
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-- 121
++++ H + II+ L G + I Y G + P LE + Y
Sbjct: 78 MMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLE--YSYNP 131
Query: 122 ---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
+ S K ++ A Q+ +EY+ S+ +HRD+ N L+ + N + I DFGL
Sbjct: 132 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGL 188
Query: 179 AK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY-- 231
A+ Y TTN +P K + A + TH + D+ S G VLL+
Sbjct: 189 ARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFG-VLLWEI 237
Query: 232 FLRGSLPWQGL 242
F G P+ G+
Sbjct: 238 FTLGGSPYPGV 248
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 24/176 (13%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
+G +Y IG G++G + S D V V I+ Q + + +I K
Sbjct: 41 VGPRYTNLSYIGEGAYG--MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-----K 93
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
I L H + II II + T+ + +D LV L+G L L +
Sbjct: 94 ILLRFRHEN--IIGINDIIRAPTIEQM----------KDVYLVTHLMGADLYKLLK--TQ 139
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
S + Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 140 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLAR 192
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 94/227 (41%), Gaps = 39/227 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+++ ++G G+FG+++ A + +T+ + A K+ ++ ++ Y ++ +
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID-----------I 87
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ DH I L F N W +L+ G +++ + + R +
Sbjct: 88 LASCDHPNIVKLLDAFYYE-----NNLW--------ILIEFCAGGAVDAVMLELERPLTE 134
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+ ++ Q + + Y+H +HRD+K N L L + + DFG++ K
Sbjct: 135 SQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD---GDIKLADFGVSAK-----NT 186
Query: 189 RHIPYRENKNLTGTARYAS-----CNTHLGIEQSRRDDLESLGYVLL 230
R I R+ + GT + + C T + D+ SLG L+
Sbjct: 187 RTIQRRD--SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 94 IKWYGV---DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150
+ +YG DGE ++ + + G SL+ + LK + +Q++ ++ +G
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQV---------LKKAGRIPEQILGKVSIAVIKGL 179
Query: 151 ---------LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
+HRD+KP N L+ ++ + DFG++ + D N + G
Sbjct: 180 TYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVG 227
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y S G S + D+ S+G L+ G P
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 3 RIIGVKYKLGRKIGSGSFGEI--FLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ 60
++IG KY +G +G GS+G++ L S V + + + P EA V K +Q
Sbjct: 2 KLIG-KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPN--GEANVKKEIQ 58
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
++R H + +I + ++++ + + Y V G + ++L E F
Sbjct: 59 LLRRLR----HKN--VIQLVDVLYNEEKQKMYMVMEYCVCG-----MQEMLDSVPEKRFP 107
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165
C+ Q+I +EY+HS+G +H+DIKP N L+ G
Sbjct: 108 VCQAHGYFC-------QLIDGLEYLHSQGIVHKDIKPGNLLLTTG 145
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 40/177 (22%)
Query: 13 RKIGSGSFGEIFLASHVDTN----EIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
R +G G FG++ L + TN E+VAVK G PQL Q +I
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCG-PQLR------SGWQREIEILRT 67
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGV---DGEDNVLVLDLLGP--SLEDLFVYCR 123
++H +H++ K+ G GE +V ++ P SL D R
Sbjct: 68 LYH-EHIV------------------KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP--R 106
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
L +L+ A Q+ + Y+H++ ++HR + N L+ R V I DFGLAK
Sbjct: 107 HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDR---LVKIGDFGLAK 160
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 45/251 (17%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
LG+ +G G+FG++ LA + ++ VAVK+ S E + ++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEME 85
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-- 121
++++ H + II+ L G + I Y G + P LE + Y
Sbjct: 86 MMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLE--YSYNP 139
Query: 122 ---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
+ S K ++ A Q+ +EY+ S+ +HRD+ N L+ + N + I DFGL
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGL 196
Query: 179 AK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY-- 231
A+ Y TTN +P K + A + TH + D+ S G VLL+
Sbjct: 197 ARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFG-VLLWEI 245
Query: 232 FLRGSLPWQGL 242
F G P+ G+
Sbjct: 246 FTLGGSPYPGV 256
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 29/169 (17%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
R+IG GSFG ++ A V +E+VA+K ++ Y K Q K + ++ V
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIK---------KMSYSGK-----QSNEKWQDIIKEV 66
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV--LVLDLLGPSLEDLFVYCRRKFSLKT 130
F L I++ G ++ LV++ S DL ++
Sbjct: 67 R----------FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE 116
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
+ + + + Y+HS +HRD+K N L+ + V + DFG A
Sbjct: 117 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSA 162
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 45/251 (17%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
LG+ +G G+FG++ LA + ++ VAVK+ S E + ++
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEME 78
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-- 121
++++ H + II+ L G + I Y G + P LE + Y
Sbjct: 79 MMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLE--YSYNP 132
Query: 122 ---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
+ S K ++ A Q+ +EY+ S+ +HRD+ N L+ + N + I DFGL
Sbjct: 133 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGL 189
Query: 179 AK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY-- 231
A+ Y TTN +P K + A + TH + D+ S G VLL+
Sbjct: 190 ARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFG-VLLWEI 238
Query: 232 FLRGSLPWQGL 242
F G P+ G+
Sbjct: 239 FTLGGSPYPGV 249
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 94 IKWYGVDGEDNVLVLDLLGP--SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFL 151
I+ YGV + ++ L P SL D + F L T+ A Q+ + Y+ S+ F+
Sbjct: 74 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 152 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTH 211
HRD+ N L+ + V I DFGL + P + H +E++ + +A C
Sbjct: 134 HRDLAARNLLLA---TRDLVKIGDFGLMRAL--PQNDDHYVMQEHRKVP----FAWCAPE 184
Query: 212 LGIEQ--SRRDDLESLGYVLL-YFLRGSLPWQGLKAATKKQKYDKICEK 257
+ S D G L F G PW GL + K DK E+
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 233
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 70 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 105
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 106 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 148
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 35/174 (20%)
Query: 14 KIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
++G G+FG + L + +T +VAVK +++SG +
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR-------------------- 53
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS--LEDLFVYCRRKF 126
F + I+ AL F G+ YG + LV++ L PS L D R +
Sbjct: 54 DFQREIQILKALHSDFIVKYRGVS----YGPGRPELRLVMEYL-PSGCLRDFLQRHRARL 108
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+L+ + Q+ +EY+ SR +HRD+ N L+ V I DFGLAK
Sbjct: 109 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAK 159
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 40/177 (22%)
Query: 13 RKIGSGSFGEIFLASHVDTN----EIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
R +G G FG++ L + TN E+VAVK G PQL Q +I
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCG-PQLR------SGWQREIEILRT 66
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGV---DGEDNVLVLDLLGP--SLEDLFVYCR 123
++H +H++ K+ G GE +V ++ P SL D R
Sbjct: 67 LYH-EHIV------------------KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP--R 105
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
L +L+ A Q+ + Y+H++ ++HR + N L+ R V I DFGLAK
Sbjct: 106 HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDR---LVKIGDFGLAK 159
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G FG++ +A V ++ VAVK+ E + ++
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 78
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 79 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFG 191
Query: 178 LAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ Y TTN +P K + A + TH + D+ S G VL++
Sbjct: 192 LARDINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 240
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 241 IFTLGGSPYPGI 252
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 70 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 105
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 106 -----------KSYLF---QLLQGLSFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 148
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 74 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 109
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 110 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 152
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 153 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 188
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G FG++ +A V ++ VAVK+ E + ++
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 76
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 77 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV---TENNVMKIADFG 189
Query: 178 LAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ Y TTN +P K + A + TH + D+ S G VL++
Sbjct: 190 LARDINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 238
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 239 IFTLGGSPYPGI 250
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G FG++ +A V ++ VAVK+ E + ++
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 81
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 82 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFG 194
Query: 178 LAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ Y TTN +P K + A + TH + D+ S G VL++
Sbjct: 195 LARDINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 243
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 244 IFTLGGSPYPGI 255
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 73 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 108
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 109 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 151
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G FG++ +A V ++ VAVK+ E + ++
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 135
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 136 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFG 248
Query: 178 LAK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ Y TTN +P K + A + TH + D+ S G VL++
Sbjct: 249 LARDINNIDYYKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 297
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 298 IFTLGGSPYPGI 309
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 45/251 (17%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
LG+ +G G+FG++ LA + ++ VAVK+ S E + ++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEME 85
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-- 121
++++ H + II+ L G + I Y G + P LE + Y
Sbjct: 86 MMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLQAREPPGLE--YSYNP 139
Query: 122 ---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
+ S K ++ A Q+ +EY+ S+ +HRD+ N L+ + N + I DFGL
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGL 196
Query: 179 AK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY-- 231
A+ Y TTN +P K + A + TH + D+ S G VLL+
Sbjct: 197 ARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFG-VLLWEI 245
Query: 232 FLRGSLPWQGL 242
F G P+ G+
Sbjct: 246 FTLGGSPYPGV 256
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 70 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 105
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 106 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 148
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
+++ ++ +HS G +HRD+KPDN L+ K + + DFG K D T H
Sbjct: 182 EVVLALDAIHSMGLIHRDVKPDNMLLD---KHGHLKLADFGTCMKM-DETGMVHC----- 232
Query: 197 KNLTGTARYAS---CNTHLGIEQSRRD-DLESLGYVLLYFLRGSLPWQGLKAATKKQKYD 252
GT Y S + G R+ D S+G L L G P+ A + Y
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY---ADSLVGTYS 289
Query: 253 KICEKKVSTPIEVLCKSHPAEFASY 277
KI + K S LC AE + +
Sbjct: 290 KIMDHKNS-----LCFPEDAEISKH 309
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 70 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 105
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 106 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 148
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 77 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 112
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 113 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 155
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 156 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 191
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 94 IKWYGV---DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150
+ +YG DGE ++ + + G SL+ + LK + +Q++ ++ +G
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQV---------LKKAGRIPEQILGKVSIAVIKGL 120
Query: 151 ---------LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
+HRD+KP N L+ ++ + DFG++ + D N + G
Sbjct: 121 TYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDEMANEFV---------G 168
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y S G S + D+ S+G L+ G P
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 70 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 105
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 106 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 148
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
Q++ ++++HS +HRD+KP N L+ + Q+ + DFGLA+ Y
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLARIY 170
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 72 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 107
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 108 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 150
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 74 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 109
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 110 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 152
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 153 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 188
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 132 LMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTTNRH 190
L++ ++ + ++ G +HR+IKP N + +G VY + DFG A++ D
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD----- 169
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQS--RRD---------DLESLGYVLLYFLRGSLPW 239
+ +L GT Y + + E++ R+D DL S+G + GSLP+
Sbjct: 170 ---EQFVSLYGTEEYLHPDMY---ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Query: 240 QGLKAATK-KQKYDKICEKKVSTPIEVLCKS 269
+ + + K+ KI K S I + K+
Sbjct: 224 RPFEGPRRNKEVMYKIITGKPSGAISGVQKA 254
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 93/227 (40%), Gaps = 39/227 (17%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLV 68
+++ ++G G+FG+++ A + +T+ + A K+ ++ ++ Y ++ +
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID-----------I 87
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ DH I L F N W +L+ G +++ + + R +
Sbjct: 88 LASCDHPNIVKLLDAFYYE-----NNLW--------ILIEFCAGGAVDAVMLELERPLTE 134
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+ ++ Q + + Y+H +HRD+K N L L + + DFG++ K
Sbjct: 135 SQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD---GDIKLADFGVSAK-----NT 186
Query: 189 RHIPYRENKNLTGTARYAS-----CNTHLGIEQSRRDDLESLGYVLL 230
R I R+ GT + + C T + D+ SLG L+
Sbjct: 187 RXIQRRD--XFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 73 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 108
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 109 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 151
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 72 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 107
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 108 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 150
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 110/287 (38%), Gaps = 47/287 (16%)
Query: 11 LGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKHPQLLYEAK-VYKILQGGSKIRLV 68
L +IGSGSFG ++ H D VAVKI P+ + +L+ + ++
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGD----VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL 95
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYCRRKF 126
+F G +DN+ ++ G SL KF
Sbjct: 96 LF--------------------------MGYMTKDNLAIVTQWCEGSSLYKHLHVQETKF 129
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
+ ++ +A Q ++Y+H++ +HRD+K +N + G V I DFGLA
Sbjct: 130 QMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLT---VKIGDFGLAT-----V 181
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRGSLPWQGLK 243
+R ++ + TG+ + + + S + D+ S G VL + G LP+ +
Sbjct: 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290
+ Q + S + L K+ P C ++RP
Sbjct: 242 --NRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERP 286
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 70 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 105
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 106 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 148
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTA 184
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 70 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 105
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 106 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 148
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 69 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 104
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 105 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 147
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 148 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 183
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 69 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 104
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 105 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 147
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 94 IKWYGV---DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150
+ +YG DGE ++ + + G SL+ + LK + +Q++ ++ +G
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQV---------LKKAGRIPEQILGKVSIAVIKGL 117
Query: 151 ---------LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
+HRD+KP N L+ ++ + DFG++ + D N + G
Sbjct: 118 TYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVG 165
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y S G S + D+ S+G L+ G P
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 94 IKWYGV---DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150
+ +YG DGE ++ + + G SL+ + LK + +Q++ ++ +G
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQV---------LKKAGRIPEQILGKVSIAVIKGL 136
Query: 151 ---------LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
+HRD+KP N L+ ++ + DFG++ + D N + G
Sbjct: 137 TYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVG 184
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y S G S + D+ S+G L+ G P
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 94 IKWYGV---DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150
+ +YG DGE ++ + + G SL+ + LK + +Q++ ++ +G
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQV---------LKKAGRIPEQILGKVSIAVIKGL 117
Query: 151 ---------LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
+HRD+KP N L+ ++ + DFG++ + D N + G
Sbjct: 118 TYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVG 165
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y S G S + D+ S+G L+ G P
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 70 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 105
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 106 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 148
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 71 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 106
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 107 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 149
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 78/208 (37%), Gaps = 25/208 (12%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+RK + + ++ + Y+H RG ++RD+K DN L+ + + D+G+ K+
Sbjct: 147 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCKEG 203
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
P GT Y + G + D +LG ++ + G P+ +
Sbjct: 204 LRPGDT-------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
Query: 243 KAA------TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296
++ T+ + I EK++ P + K+ S+ + P GF
Sbjct: 257 GSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASV-LKSFLNKDPKERLGCHPQTGFAD 315
Query: 297 RLFHDLFSREGYDFDFVFDWTILKYQQT 324
H F DW +++ +Q
Sbjct: 316 IQGHPFFRN--------VDWDMMEQKQV 335
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 45/251 (17%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
LG+ +G G+FG++ LA + ++ VAVK+ S E + ++
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEME 126
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY-- 121
++++ H + II+ L G + I Y G + P LE + Y
Sbjct: 127 MMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLE--YSYNP 180
Query: 122 ---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
+ S K ++ A Q+ +EY+ S+ +HRD+ N L+ + N + I DFGL
Sbjct: 181 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGL 237
Query: 179 AK-----KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY-- 231
A+ Y TTN +P K + A + TH + D+ S G VLL+
Sbjct: 238 ARDIHHIDYYKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFG-VLLWEI 286
Query: 232 FLRGSLPWQGL 242
F G P+ G+
Sbjct: 287 FTLGGSPYPGV 297
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 71 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 106
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 107 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 149
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 150 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 185
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 69 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 104
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 105 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 147
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 148 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 183
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 77 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 112
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 113 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 155
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 156 LARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTA 191
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
Q++ ++++HS +HRD+KP N L+ + Q+ + DFGLA+ Y
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLARIY 170
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 94 IKWYGV---DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150
+ +YG DGE ++ + + G SL+ + LK + +Q++ ++ +G
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQV---------LKKAGRIPEQILGKVSIAVIKGL 117
Query: 151 ---------LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
+HRD+KP N L+ ++ + DFG++ + D N + G
Sbjct: 118 TYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVG 165
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y S G S + D+ S+G L+ G P
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 62/216 (28%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVYK 57
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLED 117
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 69 VIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI------ 104
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
K+ L Q++ + + HS LHRD+KP N L+ + + DFG
Sbjct: 105 -----------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFG 147
Query: 178 LAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
LA+ + P T H + YR + L G Y++
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+T+ L Q + ++++H+ +HRD+KP+N L+ G V + DFGLA+ Y
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIY 162
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 94 IKWYGV---DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150
+ +YG DGE ++ + + G SL+ + LK + +Q++ ++ +G
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQV---------LKKAGRIPEQILGKVSIAVIKGL 144
Query: 151 ---------LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
+HRD+KP N L+ ++ + DFG++ + D N + G
Sbjct: 145 TYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVG 192
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y S G S + D+ S+G L+ G P
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+T+ L Q + ++++H+ +HRD+KP+N L+ G V + DFGLA+ Y
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIY 162
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 62/217 (28%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVK----------IENSGTKHPQLLYE------AKVY 56
KIG G++G ++ A + T E+VA+K + ++ + LL E K+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 57 KILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE 116
++ +K+ LV F H + + +S L GIP L L+
Sbjct: 70 DVIHTENKLYLV-FEFLHQDLKKF--MDASALTGIP---------------LPLI----- 106
Query: 117 DLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
K+ L Q++ + + HS LHRD+KP N L+ + + DF
Sbjct: 107 ------------KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADF 148
Query: 177 GLAKKYRDPT-TNRH----IPYRENKNLTGTARYASC 208
GLA+ + P T H + YR + L G Y++
Sbjct: 149 GLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
Q++ ++++HS +HRD+KP N L+ + Q+ + DFGLA+ Y
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLARIY 170
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+T+ L Q + ++++H+ +HRD+KP+N L+ G V + DFGLA+ Y
Sbjct: 120 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIY 170
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+T+ L Q + ++++H+ +HRD+KP+N L+ G V + DFGLA+ Y
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIY 162
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 94 IKWYGV---DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150
+ +YG DGE ++ + + G SL+ + +R + ++++ ++ RG
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR---------IPEEILGKVSIAVLRGL 127
Query: 151 ---------LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
+HRD+KP N L+ ++ + DFG++ + D N + G
Sbjct: 128 AYLREKHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVG 175
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y + G S + D+ S+G L+ G P
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 30/165 (18%)
Query: 4 IIGVKYKLGRKIGSGSFGEIF-LASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62
++ +Y++ +G G+FG++ H VAVKI + ++ +
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCE-----------AAR 59
Query: 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDL---- 118
S+I+ V+ H T +ST + ++W+ G +V +LLG S D
Sbjct: 60 SEIQ--------VLEHLNTTDPNSTFRCVQMLEWFEHHGH-ICIVFELLGLSTYDFIKEN 110
Query: 119 -FVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162
F+ F L + +A Q+ + ++HS H D+KP+N L
Sbjct: 111 GFL----PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILF 151
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 24/176 (13%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
+G +Y IG G++G + S D V V I+ Q + + +I K
Sbjct: 23 VGPRYTNLSYIGEGAYG--MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREI-----K 75
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
I L H + II II + T+ + +D +V DL+ L L +
Sbjct: 76 ILLAFRHEN--IIGINDIIRAPTIEQM----------KDVYIVQDLMETDLYKLLK--TQ 121
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
S + Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 122 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 174
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 132 LMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTTNRH 190
L++ ++ + ++ G +HR+IKP N + +G VY + DFG A++ D
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD----- 169
Query: 191 IPYRENKNLTGTARYASCNTHLGIEQS--RRD---------DLESLGYVLLYFLRGSLPW 239
+ L GT Y + + E++ R+D DL S+G + GSLP+
Sbjct: 170 ---EQFVXLYGTEEYLHPDMY---ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Query: 240 QGLKAATK-KQKYDKICEKKVSTPIEVLCKS 269
+ + + K+ KI K S I + K+
Sbjct: 224 RPFEGPRRNKEVMYKIITGKPSGAISGVQKA 254
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 94 IKWYGV---DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150
+ +YG DGE ++ + + G SL+ + LK + +Q++ ++ +G
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQV---------LKKAGRIPEQILGKVSIAVIKGL 117
Query: 151 ---------LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
+HRD+KP N L+ ++ + DFG++ + D N + G
Sbjct: 118 TYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVG 165
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y S G S + D+ S+G L+ G P
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 94 IKWYGV---DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150
+ +YG DGE ++ + + G SL+ + LK + +Q++ ++ +G
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQV---------LKKAGRIPEQILGKVSIAVIKGL 117
Query: 151 ---------LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
+HRD+KP N L+ ++ + DFG++ + D N + G
Sbjct: 118 TYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMAN---------SFVG 165
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y S G S + D+ S+G L+ G P
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLAR 176
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLAR 172
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLAR 176
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKICDFGLAR 172
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G+FG++ +A V ++ VAVK+ E + ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 89
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 90 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFG 202
Query: 178 LAKKYRD-----PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ + TTN +P K + A + TH + D+ S G VL++
Sbjct: 203 LARDINNIDXXKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 251
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 252 IFTLGGSPYPGI 263
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R L +L+ A Q+ + Y+H++ ++HRD+ N L+ R V I DFGLAK
Sbjct: 128 RHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDR---LVKIGDFGLAK 182
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQ 60
K LG+ +G G+FG++ +A V ++ VAVK+ E + ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVS 89
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLE---D 117
++++ H + II+ L G + I Y G + P +E D
Sbjct: 90 EMEMMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 118 LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + + K ++ Q+ +EY+ S+ +HRD+ N L+ + N + I DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFG 202
Query: 178 LAKKYRD-----PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY- 231
LA+ + TTN +P K + A + TH + D+ S G VL++
Sbjct: 203 LARDINNIDXXKKTTNGRLPV---KWMAPEALFDRVYTH-------QSDVWSFG-VLMWE 251
Query: 232 -FLRGSLPWQGL 242
F G P+ G+
Sbjct: 252 IFTLGGSPYPGI 263
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 79/208 (37%), Gaps = 25/208 (12%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+RK + + ++ + Y+H RG ++RD+K DN L+ + + D+G+ K+
Sbjct: 104 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCKEG 160
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
P GT Y + G + D +LG ++ + G P+ +
Sbjct: 161 LRPGDT-------TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213
Query: 243 KAA------TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296
++ T+ + I EK++ P + K+ + S+ + P GF
Sbjct: 214 GSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA-ASVLKSFLNKDPKERLGCHPQTGFAD 272
Query: 297 RLFHDLFSREGYDFDFVFDWTILKYQQT 324
H F DW +++ +Q
Sbjct: 273 IQGHPFFRN--------VDWDMMEQKQV 292
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
Q++ +Y+H +HRD+K N + + +V I DFGLA K +
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERK------- 174
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
K L GT Y + S D+ S+G ++ L G P++ + K+ Y +I +
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKK 231
Query: 257 KKVSTP 262
+ S P
Sbjct: 232 NEYSIP 237
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 25/154 (16%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
F + A ++ +E +H ++RD+KP+N L+ + I D GLA
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD---DHGHIRISDLGLAV----- 334
Query: 186 TTNRHIPYREN-KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA 244
H+P + K GT Y + + D +LG +L + G P+Q K
Sbjct: 335 ----HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK 390
Query: 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYF 278
K+++ +E L K P E++ F
Sbjct: 391 KIKREE------------VERLVKEVPEEYSERF 412
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLN---TTXDLKIXDFGLAR 172
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 36/249 (14%)
Query: 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDH 74
+G GSFG++ L+ T+E+ AVKI K ++ + V + + R++
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKI----LKKDVVIQDDDVECTM---VEKRVLALPGKP 401
Query: 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLML 134
+ L F T+ + + Y V+G D + + +G +F +
Sbjct: 402 PFLTQLHSCFQ-TMDRLYFVMEY-VNGGDLMYHIQQVG------------RFKEPHAVFY 447
Query: 135 ADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK-YRDPTTNRHIPY 193
A ++ + ++ S+G ++RD+K DN ++ + I DFG+ K+ D T
Sbjct: 448 AAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKENIWDGVT------ 498
Query: 194 RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDK 253
K GT Y + + D + G +L L G P++G + + +
Sbjct: 499 --TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG---EDEDELFQS 553
Query: 254 ICEKKVSTP 262
I E V+ P
Sbjct: 554 IMEHNVAYP 562
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 49/274 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-ENSGTKHPQLLYEAKVYKIL-QGGSKI 65
+Y++ IG GSFG++ A E VA+KI +N Q E ++ +++ + +++
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 95
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-R 124
+ + H+ +F + L LV ++L +L DL R
Sbjct: 96 KYYIVHLKR------HFMFRNHL----------------CLVFEMLSYNLYDLLRNTNFR 133
Query: 125 KFSLKTVLMLADQMIARIEYVHS--RGFLHRDIKPDNFLMGLGRKANQVYIIDFG----L 178
SL A QM + ++ + +H D+KP+N L+ K + + I+DFG L
Sbjct: 134 GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL-CNPKRSAIKIVDFGSSCQL 192
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
++ +R Y S LG+ D+ SLG +L+ G
Sbjct: 193 GQRIYQXIQSRF--------------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 238
Query: 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 272
+ G A + + +KI E P +L ++ A
Sbjct: 239 FSG---ANEVDQMNKIVEVLGIPPAHILDQAPKA 269
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
Q++ +Y+H +HRD+K N + + +V I DFGLA K +
Sbjct: 129 QIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERK------- 178
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
K L GT Y + S D+ S+G ++ L G P++ + K+ Y +I +
Sbjct: 179 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKK 235
Query: 257 KKVSTP 262
+ S P
Sbjct: 236 NEYSIP 241
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
Q++ +Y+H +HRD+K N + + +V I DFGLA K +
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERK------- 174
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
K L GT Y + S D+ S+G ++ L G P++ + K+ Y +I +
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKK 231
Query: 257 KKVSTP 262
+ S P
Sbjct: 232 NEYSIP 237
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181
I+Y+HS HRD+KP+N L R + + DFG AK+
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 21/201 (10%)
Query: 100 DGEDNVLVLDL--LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157
+ E +LV+++ LGP + ++ R K ++ L Q+ ++Y+ F+HRD+
Sbjct: 440 EAESWMLVMEMAELGPL--NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 497
Query: 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS 217
N L+ A I DFGL+K R Y+ + ++ + + S
Sbjct: 498 RNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECINYYKFS 550
Query: 218 RRDDLESLGYVLLY--FLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 275
+ D+ S G VL++ F G P++G+K + + + EK C P E
Sbjct: 551 SKSDVWSFG-VLMWEAFSYGQKPYRGMKGS----EVTAMLEKGERMGCPAGC---PREMY 602
Query: 276 SYFHYCQSLTFDQRPDYGFLK 296
+ C + + RP + ++
Sbjct: 603 DLMNLCWTYDVENRPGFAAVE 623
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 100 DGEDNVLVLDL--LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157
+ E +LV+++ LGP + ++ R K ++ L Q+ ++Y+ F+HRD+
Sbjct: 441 EAESWMLVMEMAELGPL--NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 498
Query: 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS 217
N L+ A I DFGL+K R Y+ + ++ + + S
Sbjct: 499 RNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECINYYKFS 551
Query: 218 RRDDLESLGYVLLY--FLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 275
+ D+ S G VL++ F G P++G+K + + + EK C P E
Sbjct: 552 SKSDVWSFG-VLMWEAFSYGQKPYRGMKGS----EVTAMLEKGERMGCPAGC---PREMY 603
Query: 276 SYFHYCQSLTFDQRPDYGF----LKRLFHDLFS 304
+ C + + RP + L+ ++D+ +
Sbjct: 604 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 636
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 30/240 (12%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
I ++L +G G++G + A+H T EIVA+K K L + KIL+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILK---- 64
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
H H I +TI N + ++ +L+ L V +
Sbjct: 65 ------HFKHENI--ITIFNIQRPDSFENFN-------EVYIIQELMQTDLHR--VISTQ 107
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
S + Q + ++ +H +HRD+KP N L+ + + DFGLA+ +
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFGLARIIDE 164
Query: 185 PTTNRHIPYRENKNLT---GTARYASCNTHL-GIEQSRRDDLESLGYVL--LYFLRGSLP 238
+ P + +T T Y + L + SR D+ S G +L L+ R P
Sbjct: 165 SAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 78/208 (37%), Gaps = 25/208 (12%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+RK + + ++ + Y+H RG ++RD+K DN L+ + + D+G+ K+
Sbjct: 100 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCKEG 156
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
P GT Y + G + D +LG ++ + G P+ +
Sbjct: 157 LRPGDT-------TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209
Query: 243 KAA------TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296
++ T+ + I EK++ P + K+ S+ + P GF
Sbjct: 210 GSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASV-LKSFLNKDPKERLGCHPQTGFAD 268
Query: 297 RLFHDLFSREGYDFDFVFDWTILKYQQT 324
H F DW +++ +Q
Sbjct: 269 IQGHPFFRN--------VDWDMMEQKQV 288
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 25/154 (16%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
F + A ++ +E +H ++RD+KP+N L+ + I D GLA
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD---DHGHIRISDLGLAV----- 334
Query: 186 TTNRHIPYREN-KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA 244
H+P + K GT Y + + D +LG +L + G P+Q K
Sbjct: 335 ----HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK 390
Query: 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYF 278
K+++ +E L K P E++ F
Sbjct: 391 KIKREE------------VERLVKEVPEEYSERF 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTKHPQLLYEAKVYKILQGGS 63
+ +Y++ + IG G FG++ A ++ VA+K + N H Q E ++ + L+
Sbjct: 95 VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 64 KIRLVVFHVDHVIIHAL-TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC 122
K + +IH L F + + + +LL +L +L
Sbjct: 155 KDNTMN------VIHMLENFTFRNHI----------------CMTFELLSMNLYELIKKN 192
Query: 123 R-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
+ + FSL V A ++ ++ +H +H D+KP+N L+ ++ + +IDFG
Sbjct: 193 KFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFG 247
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT-TNRH----I 191
Q++ + + HS LHRD+KP N L+ + + DFGLA+ + P T H +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 192 PYRENKNLTGTARYASC 208
YR + L G Y++
Sbjct: 168 WYRAPEILLGCKYYSTA 184
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT-TNRH----I 191
Q++ + + HS LHRD+KP N L+ + + DFGLA+ + P T H +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 192 PYRENKNLTGTARYASC 208
YR + L G Y++
Sbjct: 167 WYRAPEILLGCKYYSTA 183
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 174
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 74/187 (39%), Gaps = 29/187 (15%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
+ KL + IG G FG++ L + N++ I+N T L EA V L+ + ++L
Sbjct: 13 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQL 70
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
L +I GG+ + Y G LV L L C KFS
Sbjct: 71 ------------LGVIVEEK-GGLYIVTEYMAKGS---LVDYLRSRGRSVLGGDCLLKFS 114
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
L + +EY+ F+HRD+ N L+ + N + DFGL K+
Sbjct: 115 L--------DVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQD 163
Query: 188 NRHIPYR 194
+P +
Sbjct: 164 TGKLPVK 170
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 112/299 (37%), Gaps = 48/299 (16%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENS--GTKHPQLLYEAKVYKILQGGSKIRLV 68
+ KIG+GSFG + A ++ V + +E + + L E + K L+
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR-------- 92
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF--VYCRRKF 126
H ++F + PN+ +++ L SL L R +
Sbjct: 93 ---------HPNIVLFMGAVTQPPNL---------SIVTEYLSRGSLYRLLHKSGAREQL 134
Query: 127 SLKTVLMLADQMIARIEYVHSRG--FLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
+ L +A + + Y+H+R +HR++K N L+ K V + DFGL++
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD---KKYTVKVCDFGLSRL--- 188
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA 244
+ + +K+ GT + + + + D+ S G +L PW L
Sbjct: 189 ----KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP 244
Query: 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303
A C++ +E+ +P + A+ C + +RP + + L L
Sbjct: 245 AQVVAAVGFKCKR-----LEIPRNLNP-QVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 176
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 140 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 180
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 172
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 177
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 138 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 178
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 129 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 169
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 176
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 170
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 176
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 172
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 176
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 170
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 177
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 30/240 (12%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
I ++L +G G++G + A+H T EIVA+K K L + KIL+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILK---- 64
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
H H I +TI N + ++ +L+ L V +
Sbjct: 65 ------HFKHENI--ITIFNIQRPDSFENFN-------EVYIIQELMQTDLHR--VISTQ 107
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
S + Q + ++ +H +HRD+KP N L+ + + DFGLA+ +
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFGLARIIDE 164
Query: 185 PTTNRHIPYRENKNLT---GTARYASCNTHL-GIEQSRRDDLESLGYVL--LYFLRGSLP 238
+ P + +T T Y + L + SR D+ S G +L L+ R P
Sbjct: 165 SAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 73/185 (39%), Gaps = 29/185 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVV 69
KL + IG G FG++ L + N++ I+N T L EA V L+ + ++L
Sbjct: 196 KLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQL-- 251
Query: 70 FHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLK 129
L +I GG+ + Y G LV L L C KFSL
Sbjct: 252 ----------LGVIVEEK-GGLYIVTEYMAKGS---LVDYLRSRGRSVLGGDCLLKFSL- 296
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 189
+ +EY+ F+HRD+ N L+ + N + DFGL K+
Sbjct: 297 -------DVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTG 346
Query: 190 HIPYR 194
+P +
Sbjct: 347 KLPVK 351
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q++ ++Y+HS LHRD+KP N L+ + I DFGLA+
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLAR 192
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 49/274 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-ENSGTKHPQLLYEAKVYKIL-QGGSKI 65
+Y++ IG GSFG++ A E VA+KI +N Q E ++ +++ + +++
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-R 124
+ + H+ +F + L LV ++L +L DL R
Sbjct: 115 KYYIVHLKR------HFMFRNHL----------------CLVFEMLSYNLYDLLRNTNFR 152
Query: 125 KFSLKTVLMLADQMIARIEYVHS--RGFLHRDIKPDNFLMGLGRKANQVYIIDFG----L 178
SL A QM + ++ + +H D+KP+N L+ K + + I+DFG L
Sbjct: 153 GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL-CNPKRSAIKIVDFGSSCQL 211
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
++ +R Y S LG+ D+ SLG +L+ G
Sbjct: 212 GQRIYQXIQSRF--------------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257
Query: 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 272
+ G A + + +KI E P +L ++ A
Sbjct: 258 FSG---ANEVDQMNKIVEVLGIPPAHILDQAPKA 288
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 73/185 (39%), Gaps = 29/185 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVV 69
KL + IG G FG++ L + N++ I+N T L EA V L+ + ++L
Sbjct: 24 KLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQL-- 79
Query: 70 FHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLK 129
L +I GG+ + Y G LV L L C KFSL
Sbjct: 80 ----------LGVIVEEK-GGLYIVTEYMAKGS---LVDYLRSRGRSVLGGDCLLKFSL- 124
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 189
+ +EY+ F+HRD+ N L+ + N + DFGL K+
Sbjct: 125 -------DVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTG 174
Query: 190 HIPYR 194
+P +
Sbjct: 175 KLPVK 179
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 31/176 (17%)
Query: 135 ADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYR 194
Q +A + + + +HRD+KP N L+ G + I DFG A + TN
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTHMTN------ 163
Query: 195 ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKI 254
NK G+A + + G S + D+ S G +L W+ + T+++ +D+I
Sbjct: 164 -NK---GSAAWMAPEVFEGSNYSEKCDVFSWGIIL---------WEVI---TRRKPFDEI 207
Query: 255 CEKKVSTPIEV-------LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303
V L K+ P S C S QRP + ++ L
Sbjct: 208 GGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 14 KIGSGSFGEIFLAS-HVDTNE----IVAVKI--ENSGTKHPQLLYEAKVYKILQGGSKIR 66
++G G+FG++FLA H E +VAVK E S + EA++ +LQ +R
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPN--IKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
+ L ++F G N ++ +G D + L ED+
Sbjct: 85 FFGVCTEG---RPLLMVFEYMRHGDLNRFLRSHGPDAK--------LLAGGEDV---APG 130
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
L +L +A Q+ A + Y+ F+HRD+ N L+G G V I DFG++ RD
Sbjct: 131 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV---VKIGDFGMS---RD 184
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL-YFLRGSLPWQGL 242
+ + YR R+ + L + + D+ S G VL F G PW L
Sbjct: 185 IYSTDY--YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 241
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 36/189 (19%)
Query: 134 LADQMIARIEYVHSR-GFLHRDIKPDNFLM-GLGRKANQVYIIDFGLAKKYRDPTTNRHI 191
+A ++ +E++HS+ +HRD+KP N L+ LG QV + DFG++ D
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG----QVKMCDFGISGYLVDSVAK--- 210
Query: 192 PYRENKNLTGTARYASCNTHLGIEQ----------SRRDDLESLGYVLLYFLRGSLPWQG 241
A C ++ E+ S + D+ SLG ++ P+
Sbjct: 211 -----------TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259
Query: 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG-FLKRLFH 300
T Q+ ++ E+ +P ++ AEF + C +RP Y ++ F
Sbjct: 260 W--GTPFQQLKQVVEE--PSP-QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
Query: 301 DLFSREGYD 309
L +G D
Sbjct: 315 TLHESKGTD 323
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 73/185 (39%), Gaps = 29/185 (15%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVV 69
KL + IG G FG++ L + N++ I+N T L EA V L+ + ++L
Sbjct: 9 KLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQL-- 64
Query: 70 FHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLK 129
L +I GG+ + Y G LV L L C KFSL
Sbjct: 65 ----------LGVIVEEK-GGLYIVTEYMAKGS---LVDYLRSRGRSVLGGDCLLKFSL- 109
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 189
+ +EY+ F+HRD+ N L+ + N + DFGL K+
Sbjct: 110 -------DVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTG 159
Query: 190 HIPYR 194
+P +
Sbjct: 160 KLPVK 164
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 38/176 (21%)
Query: 13 RKIGSGSFGEIFLASHVDTN----EIVAVKI--ENSGTKHPQLLYEAKVYKILQGGSKIR 66
R +G G FG++ L + TN E+VAVK + G +H + G K
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH-------------RSGWKQE 66
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP--SLEDLFVYCRR 124
+ + + H I + GE ++ ++ P SL D R
Sbjct: 67 IDILRT---LYHEHIIKYKGCCED---------QGEKSLQLVMEYVPLGSLRDYLP--RH 112
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
L +L+ A Q+ + Y+HS+ ++HR++ N L+ R V I DFGLAK
Sbjct: 113 SIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDR---LVKIGDFGLAK 165
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 32/203 (15%)
Query: 51 YEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LV 107
Y K+ + GGS V + + + I+ + G PNI E N LV
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDIL--RKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 108 LDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165
DL+ +LF Y K +L K + ++ I +H +HRD+KP+N L+
Sbjct: 103 FDLMKKG--ELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-- 158
Query: 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD----- 220
+ + DFG + + P + +++ GT Y + IE S D
Sbjct: 159 -DDMNIKLTDFGFSCQLD--------PGEKLRSVCGTPSYLAPEI---IECSMNDNHPGY 206
Query: 221 ----DLESLGYVLLYFLRGSLPW 239
D+ S G ++ L GS P+
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 14 KIGSGSFGEIFLAS-HVDTNE----IVAVKI--ENSGTKHPQLLYEAKVYKILQGGSKIR 66
++G G+FG++FLA H E +VAVK E S + EA++ +LQ +R
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPN--IKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
+ L ++F G N ++ +G D + L ED+
Sbjct: 79 FFGVCTEG---RPLLMVFEYMRHGDLNRFLRSHGPDAK--------LLAGGEDV---APG 124
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
L +L +A Q+ A + Y+ F+HRD+ N L+G G V I DFG++ RD
Sbjct: 125 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV---VKIGDFGMS---RD 178
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL-YFLRGSLPWQGL 242
+ + YR R+ + L + + D+ S G VL F G PW L
Sbjct: 179 IYSTDY--YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 235
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 98/234 (41%), Gaps = 28/234 (11%)
Query: 14 KIGSGSFGEIFLAS-HVDTNE----IVAVKI--ENSGTKHPQLLYEAKVYKILQGGSKIR 66
++G G+FG++FLA H E +VAVK E S + EA++ +LQ +R
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ L ++F G N ++ G D L+ ED+
Sbjct: 108 FFGVCTEG---RPLLMVFEYMRHGDLN-RFLRSHGPDAKLL-----AGGEDV---APGPL 155
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
L +L +A Q+ A + Y+ F+HRD+ N L+G G V I DFG++ RD
Sbjct: 156 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV---VKIGDFGMS---RDIY 209
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL-YFLRGSLPW 239
+ + YR R+ + L + + D+ S G VL F G PW
Sbjct: 210 STDY--YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 261
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 36/189 (19%)
Query: 134 LADQMIARIEYVHSR-GFLHRDIKPDNFLM-GLGRKANQVYIIDFGLAKKYRDPTTNRHI 191
+A ++ +E++HS+ +HRD+KP N L+ LG QV + DFG++ D
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG----QVKMCDFGISGYLVDDVA---- 165
Query: 192 PYRENKNLTGTARYASCNTHLGIEQ----------SRRDDLESLGYVLLYFLRGSLPWQG 241
K++ A C ++ E+ S + D+ SLG ++ P+
Sbjct: 166 -----KDID-----AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215
Query: 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG-FLKRLFH 300
T Q+ ++ E+ +P ++ AEF + C +RP Y ++ F
Sbjct: 216 W--GTPFQQLKQVVEE--PSP-QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
Query: 301 DLFSREGYD 309
L +G D
Sbjct: 271 TLHESKGTD 279
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 31/176 (17%)
Query: 135 ADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYR 194
Q +A + + + +HRD+KP N L+ G + I DFG A + TN
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTHMTN------ 162
Query: 195 ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKI 254
NK G+A + + G S + D+ S G +L W+ + T+++ +D+I
Sbjct: 163 -NK---GSAAWMAPEVFEGSNYSEKCDVFSWGIIL---------WEVI---TRRKPFDEI 206
Query: 255 CEKKVSTPIEV-------LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303
V L K+ P S C S QRP + ++ L
Sbjct: 207 GGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 51 YEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LV 107
Y K+ + GGS V + + + I+ + G PNI E N LV
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDIL--RKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 108 LDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165
DL+ +LF Y K +L K + ++ I +H +HRD+KP+N L+
Sbjct: 103 FDLMKKG--ELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-- 158
Query: 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD----- 220
+ + DFG + + P + + + GT Y + IE S D
Sbjct: 159 -DDMNIKLTDFGFSCQLD--------PGEKLREVCGTPSYLAPEI---IECSMNDNHPGY 206
Query: 221 ----DLESLGYVLLYFLRGSLPW 239
D+ S G ++ L GS P+
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K R++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL +
Sbjct: 76 ------------IVKYKGVCYSA---GRRNLK----------LIMEFLPYGSLREYLQKH 110
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 111 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 165
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRL 67
KY +GSG+FG ++ A + N+ V VK K ++L + + G + +
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKF----IKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 68 VVF-HVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
+ V+H I + IF N ++ LV++ G L DLF + R
Sbjct: 81 AILSRVEHANIIKVLDIFE-------NQGFFQ-------LVMEKHGSGL-DLFAFIDRHP 125
Query: 127 SLKTVLM--LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
L L + Q+++ + Y+ + +HRDIK +N ++ + + +IDFG A
Sbjct: 126 RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSA 177
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 41/249 (16%)
Query: 11 LGRKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTKHPQLLYEAKVYKILQGGS 63
LG+ +G G+FG++ LA + ++ VAVK+ S E + ++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEME 85
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC- 122
++++ H + II+ L G + I Y G + P LE F
Sbjct: 86 MMKMIGKHKN--IINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSH 141
Query: 123 --RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ S K ++ A Q+ +EY+ S+ +HRD+ N L+ + N + I DFGLA+
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLAR 198
Query: 181 KYR-----DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY--FL 233
TTN +P K + A + TH + D+ S G VLL+ F
Sbjct: 199 DIHHIDXXKKTTNGRLPV---KWMAPEALFDRIYTH-------QSDVWSFG-VLLWEIFT 247
Query: 234 RGSLPWQGL 242
G P+ G+
Sbjct: 248 LGGSPYPGV 256
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 78/208 (37%), Gaps = 25/208 (12%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
+RK + + ++ + Y+H RG ++RD+K DN L+ + + D+G+ K+
Sbjct: 115 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCKEG 171
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
P GT Y + G + D +LG ++ + G P+ +
Sbjct: 172 LRPGDT-------TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
Query: 243 KAA------TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296
++ T+ + I EK++ P + K+ S+ + P GF
Sbjct: 225 GSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAASV-LKSFLNKDPKERLGCLPQTGFAD 283
Query: 297 RLFHDLFSREGYDFDFVFDWTILKYQQT 324
H F DW +++ +Q
Sbjct: 284 IQGHPFFRN--------VDWDMMEQKQV 303
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 49/274 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-ENSGTKHPQLLYEAKVYKIL-QGGSKI 65
+Y++ IG GSFG++ A E VA+KI +N Q E ++ +++ + +++
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-R 124
+ + H+ +F + L LV ++L +L DL R
Sbjct: 115 KYYIVHLKR------HFMFRNHL----------------CLVFEMLSYNLYDLLRNTNFR 152
Query: 125 KFSLKTVLMLADQMIARIEYVHS--RGFLHRDIKPDNFLMGLGRKANQVYIIDFG----L 178
SL A QM + ++ + +H D+KP+N L+ K + I+DFG L
Sbjct: 153 GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL-CNPKRXAIKIVDFGSSCQL 211
Query: 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
++ +R Y S LG+ D+ SLG +L+ G
Sbjct: 212 GQRIYQXIQSRF--------------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257
Query: 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 272
+ G A + + +KI E P +L ++ A
Sbjct: 258 FSG---ANEVDQMNKIVEVLGIPPAHILDQAPKA 288
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 100 DGEDNVLVLDL--LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157
+ E +LV+++ LGP + ++ R K ++ L Q+ ++Y+ F+HRD+
Sbjct: 82 EAESWMLVMEMAELGPL--NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 139
Query: 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS 217
N L+ A I DFGL+K R Y+ + ++ + + S
Sbjct: 140 RNVLLVTQHYAK---ISDFGLSKALRADENX----YKAQTHGKWPVKWYAPECINYYKFS 192
Query: 218 RRDDLESLGYVLLY--FLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 275
+ D+ S G VL++ F G P++G+K + +K +++ P P E
Sbjct: 193 SKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEK--GERMGCP-----AGCPREMY 244
Query: 276 SYFHYCQSLTFDQRPDYGF----LKRLFHDLFS 304
+ C + + RP + L+ ++D+ +
Sbjct: 245 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 277
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 42/175 (24%)
Query: 92 PNIKWYGVDGEDN---VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMI-------AR 141
PNI Y E+N +V+D DLF +R + K VL DQ++
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGG--DLF---KRINAQKGVLFQEDQILDWFVQICLA 137
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK----------------YRDP 185
+++VH R LHRDIK N + K V + DFG+A+ Y P
Sbjct: 138 LKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
Query: 186 TTNRHIPYRENKNL--TGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
+ PY ++ G Y C E S+ ++L + GS P
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFEAG------SMKNLVLKIISGSFP 243
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
Q++ +Y+H +HRD+K N + + +V I DFGLA K +
Sbjct: 123 QIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERK------- 172
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
K L GT Y + S D+ S+G ++ L G P++ + K+ Y +I +
Sbjct: 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKK 229
Query: 257 KKVSTP 262
+ S P
Sbjct: 230 NEYSIP 235
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 23/125 (18%)
Query: 134 LADQMIARIEYVHSRGFLHRDIKPDNFLMG----------LGRKANQVYIIDFGLAKKYR 183
L Q+ + + ++HS +HRD+KP N L+ G + ++ I DFGL KK
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 184 DPTTNRHIPYREN-KNLTGTARY-------ASCNTHLGIEQSRRDDLESLGYVLLYFL-R 234
++ +R N N +GT+ + S N +R D+ S+G V Y L +
Sbjct: 180 SGQSS----FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 235 GSLPW 239
G P+
Sbjct: 236 GKHPF 240
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 37/171 (21%)
Query: 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVD 73
++G GS+GE+F + + AVK S + P+ + K+ + GS +
Sbjct: 64 RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPK----DRARKLAEVGSH--------E 111
Query: 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVL--DLLGPSLEDLFVYCRR-KFSLKT 130
V H + W E +L L +L GPSL+ +C SL
Sbjct: 112 KVGQHPCCVRLEQA--------WE----EGGILYLQTELCGPSLQQ---HCEAWGASLPE 156
Query: 131 VLM---LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
+ L D ++A + ++HS+G +H D+KP N +G + + DFGL
Sbjct: 157 AQVWGYLRDTLLA-LAHLHSQGLVHLDVKPANIFLG---PRGRCKLGDFGL 203
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
Q++ +Y+H +HRD+K N + + +V I DFGLA K + +
Sbjct: 147 QIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKV----- 198
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
L GT Y + S D+ S+G ++ L G P++ + K+ Y +I +
Sbjct: 199 --LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKK 253
Query: 257 KKVSTP 262
+ S P
Sbjct: 254 NEYSIP 259
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
Q++ +Y+H +HRD+K N + + +V I DFGLA K + +
Sbjct: 149 QIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKV----- 200
Query: 197 KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256
L GT Y + S D+ S+G ++ L G P++ + K+ Y +I +
Sbjct: 201 --LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE---TSCLKETYLRIKK 255
Query: 257 KKVSTP 262
+ S P
Sbjct: 256 NEYSIP 261
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 51 YEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNV---LV 107
Y K+ + GGS V + + + I+ + G PNI E N LV
Sbjct: 32 YAVKIIDVTGGGSFSAEEVQELREATLKEVDIL--RKVSGHPNIIQLKDTYETNTFFFLV 89
Query: 108 LDLLGPSLEDLFVYCRRKFSL--KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165
DL+ +LF Y K +L K + ++ I +H +HRD+KP+N L+
Sbjct: 90 FDLMKKG--ELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-- 145
Query: 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD----- 220
+ + DFG + + P + + + GT Y + IE S D
Sbjct: 146 -DDMNIKLTDFGFSCQLD--------PGEKLREVCGTPSYLAPEI---IECSMNDNHPGY 193
Query: 221 ----DLESLGYVLLYFLRGSLPW 239
D+ S G ++ L GS P+
Sbjct: 194 GKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 76 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 110
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 111 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 165
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 100 DGEDNVLVLDL--LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157
+ E +LV+++ LGP + ++ R K ++ L Q+ ++Y+ F+HRD+
Sbjct: 96 EAESWMLVMEMAELGPL--NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 153
Query: 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS 217
N L+ A I DFGL+K R Y+ + ++ + + S
Sbjct: 154 RNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECINYYKFS 206
Query: 218 RRDDLESLGYVLLY--FLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 275
+ D+ S G VL++ F G P++G+K + + + EK C P E
Sbjct: 207 SKSDVWSFG-VLMWEAFSYGQKPYRGMKGS----EVTAMLEKGERMGCPAGC---PREMY 258
Query: 276 SYFHYCQSLTFDQRPDYGF----LKRLFHDLFS 304
+ C + + RP + L+ ++D+ +
Sbjct: 259 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 291
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVK----IENSGTKHPQLLYEAKVYKILQ 60
+G +Y + +G G G +F A D ++ VA+K + KH L E K+ + L
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHA--LREIKIIRRLD 66
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSS--TLGGIPNIKWYGVDGEDNVLVLDLLGPSLED- 117
+ ++ VF + LT S L + ++ Y NVL GP LE+
Sbjct: 67 HDNIVK--VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ---GPLLEEH 121
Query: 118 --LFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 175
LF+Y Q++ ++Y+HS LHRD+KP N + + + I D
Sbjct: 122 ARLFMY---------------QLLRGLKYIHSANVLHRDLKPANLF--INTEDLVLKIGD 164
Query: 176 FGLAK 180
FGLA+
Sbjct: 165 FGLAR 169
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 78 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 112
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 113 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 167
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 100 DGEDNVLVLDL--LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157
+ E +LV+++ LGP + ++ R K ++ L Q+ ++Y+ F+HRD+
Sbjct: 82 EAESWMLVMEMAELGPL--NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 139
Query: 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS 217
N L+ A I DFGL+K R Y+ + ++ + + S
Sbjct: 140 RNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECINYYKFS 192
Query: 218 RRDDLESLGYVLLY--FLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 275
+ D+ S G VL++ F G P++G+K + +K +++ P P E
Sbjct: 193 SKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEK--GERMGCP-----AGCPREMY 244
Query: 276 SYFHYCQSLTFDQRPDYGF----LKRLFHDLFS 304
+ C + + RP + L+ ++D+ +
Sbjct: 245 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 277
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 38/176 (21%)
Query: 13 RKIGSGSFGEIFLASHVDTN----EIVAVKI--ENSGTKHPQLLYEAKVYKILQGGSKIR 66
R +G G FG++ L + TN E+VAVK + G +H + G K
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH-------------RSGWKQE 66
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP--SLEDLFVYCRR 124
+ + + H I + GE ++ ++ P SL D R
Sbjct: 67 IDILRT---LYHEHIIKYKGCCED---------QGEKSLQLVMEYVPLGSLRDYLP--RH 112
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
L +L+ A Q+ + Y+H++ ++HR++ N L+ R V I DFGLAK
Sbjct: 113 SIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDR---LVKIGDFGLAK 165
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 36/249 (14%)
Query: 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDH 74
+G GSFG++ L+ T+E+ AVKI K ++ + V + + R++
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKI----LKKDVVIQDDDVECTM---VEKRVLALPGKP 80
Query: 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLML 134
+ L F T+ + + Y V+G D + + +G +F +
Sbjct: 81 PFLTQLHSCFQ-TMDRLYFVMEY-VNGGDLMYHIQQVG------------RFKEPHAVFY 126
Query: 135 ADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK-YRDPTTNRHIPY 193
A ++ + ++ S+G ++RD+K DN ++ + I DFG+ K+ D T
Sbjct: 127 AAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKENIWDGVT------ 177
Query: 194 RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDK 253
K GT Y + + D + G +L L G P++G + + +
Sbjct: 178 --TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG---EDEDELFQS 232
Query: 254 ICEKKVSTP 262
I E V+ P
Sbjct: 233 IMEHNVAYP 241
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 80 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 114
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 115 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 169
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 79 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 113
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 114 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 168
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 72 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 106
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 107 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 161
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 73 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 107
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 108 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 162
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 100 DGEDNVLVLDL--LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157
+ E +LV+++ LGP + ++ R K ++ L Q+ ++Y+ F+HRD+
Sbjct: 88 EAESWMLVMEMAELGPL--NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 145
Query: 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS 217
N L+ A I DFGL+K R Y+ + ++ + + S
Sbjct: 146 RNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECINYYKFS 198
Query: 218 RRDDLESLGYVLLY--FLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 275
+ D+ S G VL++ F G P++G+K + +K +++ P P E
Sbjct: 199 SKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEK--GERMGCP-----AGCPREMY 250
Query: 276 SYFHYCQSLTFDQRPDYGF----LKRLFHDLFSR 305
+ C + + RP + L+ ++D+ +
Sbjct: 251 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 100 DGEDNVLVLDL--LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157
+ E +LV+++ LGP + ++ R K ++ L Q+ ++Y+ F+HRD+
Sbjct: 78 EAESWMLVMEMAELGPL--NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 135
Query: 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS 217
N L+ A I DFGL+K R Y+ + ++ + + S
Sbjct: 136 RNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECINYYKFS 188
Query: 218 RRDDLESLGYVLLY--FLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 275
+ D+ S G VL++ F G P++G+K + +K +++ P P E
Sbjct: 189 SKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEK--GERMGCP-----AGCPREMY 240
Query: 276 SYFHYCQSLTFDQRPDYGF----LKRLFHDLFSR 305
+ C + + RP + L+ ++D+ +
Sbjct: 241 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 274
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 104 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 138
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 139 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 193
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 100 DGEDNVLVLDL--LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157
+ E +LV+++ LGP + ++ R K ++ L Q+ ++Y+ F+HRD+
Sbjct: 76 EAESWMLVMEMAELGPL--NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 133
Query: 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS 217
N L+ A I DFGL+K R Y+ + ++ + + S
Sbjct: 134 RNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECINYYKFS 186
Query: 218 RRDDLESLGYVLLY--FLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 275
+ D+ S G VL++ F G P++G+K + +K +++ P P E
Sbjct: 187 SKSDVWSFG-VLMWEAFSYGQKPYRGMKGSEVTAMLEK--GERMGCP-----AGCPREMY 238
Query: 276 SYFHYCQSLTFDQRPDYGF----LKRLFHDLFSR 305
+ C + + RP + L+ ++D+ +
Sbjct: 239 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 272
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 73 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 107
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 108 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 162
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 71 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 105
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 106 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 160
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 131 VLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165
V+ A +M+ IE VH +H DIKPDNF++G G
Sbjct: 174 VISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNG 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 100 DGEDNVLVLDL--LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157
+ E +LV+++ LGP + ++ R K ++ L Q+ ++Y+ F+HRD+
Sbjct: 98 EAESWMLVMEMAELGPL--NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 155
Query: 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS 217
N L+ A I DFGL+K R Y+ + ++ + + S
Sbjct: 156 RNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECINYYKFS 208
Query: 218 RRDDLESLGYVLLY--FLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 275
+ D+ S G VL++ F G P++G+K + + + EK C P E
Sbjct: 209 SKSDVWSFG-VLMWEAFSYGQKPYRGMKGS----EVTAMLEKGERMGCPAGC---PREMY 260
Query: 276 SYFHYCQSLTFDQRPDYGF----LKRLFHDLFS 304
+ C + + RP + L+ ++D+ +
Sbjct: 261 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 293
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 100 DGEDNVLVLDL--LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157
+ E +LV+++ LGP + ++ R K ++ L Q+ ++Y+ F+HRD+
Sbjct: 98 EAESWMLVMEMAELGPL--NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 155
Query: 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS 217
N L+ A I DFGL+K R Y+ + ++ + + S
Sbjct: 156 RNVLLVTQHYAK---ISDFGLSKALRADENY----YKAQTHGKWPVKWYAPECINYYKFS 208
Query: 218 RRDDLESLGYVLLY--FLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 275
+ D+ S G VL++ F G P++G+K + + + EK C P E
Sbjct: 209 SKSDVWSFG-VLMWEAFSYGQKPYRGMKGS----EVTAMLEKGERMGCPAGC---PREMY 260
Query: 276 SYFHYCQSLTFDQRPDYGF----LKRLFHDLFS 304
+ C + + RP + L+ ++D+ +
Sbjct: 261 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 293
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 91 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 125
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 126 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 180
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 77 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 111
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 112 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 166
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 73 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 107
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 108 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 162
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 91 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 125
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 126 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 180
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 134 LADQMIARIEYVHSRGFLHRDIKPDNFLMG----------LGRKANQVYIIDFGLAKKYR 183
L Q+ + + ++HS +HRD+KP N L+ G + ++ I DFGL KK
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK-- 177
Query: 184 DPTTNRHIPYREN-KNLTGTARY-------ASCNTHLGIEQSRRDDLESLGYVLLYFL-R 234
+ +R N N +GT+ + S N +R D+ S+G V Y L +
Sbjct: 178 --LDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 235 GSLPW 239
G P+
Sbjct: 236 GKHPF 240
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 92 PNIKWYGVDGED---NVLVLDLLGPSLEDLFVYCRRK----FSLKTVLMLADQMIARIEY 144
PN+ Y +D + ++L +L++ Y +K L+ + +L Q + + +
Sbjct: 78 PNVIRYFCTEKDRQFQYIAIELCAATLQE---YVEQKDFAHLGLEPITLL-QQTTSGLAH 133
Query: 145 VHSRGFLHRDIKPDNFLMGLGRKANQV--YIIDFGLAKK 181
+HS +HRD+KP N L+ + ++ I DFGL KK
Sbjct: 134 LHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 92/240 (38%), Gaps = 30/240 (12%)
Query: 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSK 64
I ++L +G G++G + A+H T EIVA+K K L + KIL+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILK---- 64
Query: 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRR 124
H H I +TI N + ++ +L+ L V +
Sbjct: 65 ------HFKHENI--ITIFNIQRPDSFENFN-------EVYIIQELMQTDLHR--VISTQ 107
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
S + Q + ++ +H +HRD+KP N L+ + + DFGLA+ +
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFGLARIIDE 164
Query: 185 PTTNRHIPYRENKNL---TGTARYASCNTHL-GIEQSRRDDLESLGYVL--LYFLRGSLP 238
+ P + + T Y + L + SR D+ S G +L L+ R P
Sbjct: 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
Q++ + + H LHRD+KP N L+ + + DFGLA+ + IP R
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLIN---SDGALKLADFGLARAF-------GIPVRSY 176
Query: 197 KNLTGTARYASCNTHLGIEQ-SRRDDLESLGYVLLYFLRG 235
+ T Y + + +G ++ S D+ S+G + + G
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
Q++ + + H LHRD+KP N L+ + + DFGLA+ + IP R
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLIN---SDGALKLADFGLARAF-------GIPVRSY 176
Query: 197 KNLTGTARYASCNTHLGIEQ-SRRDDLESLGYVLLYFLRG 235
+ T Y + + +G ++ S D+ S+G + + G
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
I ++H +HRDIK N L+ +A I DFGLA+ + + + G
Sbjct: 137 INFLHENHHIHRDIKSANILLD---EAFTAKISDFGLAR-----ASEKFAQXVXXSRIVG 188
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y + G E + + D+ S G VLL + G LP
Sbjct: 189 TTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG-LP 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR--DPT 186
+T+ Q++ ++Y+H +HRDIK DN L + + + I DFG +K+ +P
Sbjct: 122 QTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVL--INTYSGVLKISDFGTSKRLAGINPC 179
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-----DLESLGYVLLYFLRGSLPWQG 241
T + TGT +Y + I++ R D+ SLG ++ G P+
Sbjct: 180 T---------ETFTGTLQYMAPEI---IDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227
Query: 242 L 242
L
Sbjct: 228 L 228
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 26/112 (23%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG-------------LAKKYRDPTTN 188
+E +H++G+ HRD+KP N L+G Q ++D G A +D
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLG---DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 189 R-HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239
R I YR S +H I++ R D+ SLG VL + G P+
Sbjct: 204 RCTISYR-------APELFSVQSHCVIDE--RTDVWSLGCVLYAMMFGEGPY 246
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR--DPT 186
+T+ Q++ ++Y+H +HRDIK DN L + + + I DFG +K+ +P
Sbjct: 108 QTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVL--INTYSGVLKISDFGTSKRLAGINPC 165
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD-----DLESLGYVLLYFLRGSLPWQG 241
T + TGT +Y + I++ R D+ SLG ++ G P+
Sbjct: 166 T---------ETFTGTLQYMAPEI---IDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 213
Query: 242 L 242
L
Sbjct: 214 L 214
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
I ++H +HRDIK N L+ +A I DFGLA+ + + + G
Sbjct: 140 INFLHENHHIHRDIKSANILLD---EAFTAKISDFGLAR-----ASEKFAQXVMXXRIVG 191
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y + G E + + D+ S G VLL + G LP
Sbjct: 192 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG-LP 226
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
I ++H +HRDIK N L+ +A I DFGLA+ + + + G
Sbjct: 146 INFLHENHHIHRDIKSANILLD---EAFTAKISDFGLAR-----ASEKFAQTVMXSRIVG 197
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y + G E + + D+ S G VLL + G LP
Sbjct: 198 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG-LP 232
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 76 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQAH 110
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ +L Q+ +EY+ ++ ++HRD+ N L+ N+V I DFGL K
Sbjct: 111 AERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTK 165
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 18/178 (10%)
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 187
L+T++ + +EY+ SR F+HRD+ N ++ + V + DFGL++K
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLA---EDMTVCVADFGLSRKIYSGDY 192
Query: 188 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAAT 246
YR+ ++ + + + D+ + G + + RG P+ G++ A
Sbjct: 193 -----YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA- 246
Query: 247 KKQKYDK-ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303
+ Y+ I ++ P E + E + C S QRP + L+ ++
Sbjct: 247 --EIYNYLIGGNRLKQPPECM-----EEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 58 ILQGGSKIRLVVFH---VDHVIIHALTIIFSSTLGGIPN-IKWYGVDGEDNVL--VLDLL 111
+ QG + R V +D I + I + PN I++Y + D L L+L
Sbjct: 50 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 109
Query: 112 GPSLEDLF---------VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162
+L+DL + +++++ ++L Q+ + + ++HS +HRD+KP N L+
Sbjct: 110 NLNLQDLVESKNVSDENLKLQKEYNPISLLR---QIASGVAHLHSLKIIHRDLKPQNILV 166
Query: 163 G----------LGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN-KNLTGTARYASCNTH 211
G + ++ I DFGL KK + +R N N +GT+ + +
Sbjct: 167 STSSRFTADQQTGAENLRILISDFGLCKKL----DSGQXXFRXNLNNPSGTSGWRAPEL- 221
Query: 212 LGIEQS------RRDDLESLGYVLLYFL-RGSLPW 239
+E+S R D+ S+G V Y L +G P+
Sbjct: 222 --LEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 41/214 (19%)
Query: 58 ILQGGSKIRLVVFH---VDHVIIHALTIIFSSTLGGIPN-IKWYGVDGEDNVL--VLDLL 111
+ QG + R V +D I + I + PN I++Y + D L L+L
Sbjct: 50 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 109
Query: 112 GPSLEDLF---------VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162
+L+DL + +++++ ++L Q+ + + ++HS +HRD+KP N L+
Sbjct: 110 NLNLQDLVESKNVSDENLKLQKEYNPISLLR---QIASGVAHLHSLKIIHRDLKPQNILV 166
Query: 163 G----------LGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN-KNLTGTARYASCNTH 211
G + ++ I DFGL KK + +R N N +GT+ + +
Sbjct: 167 STSSRFTADQQTGAENLRILISDFGLCKKL----DSGQXXFRXNLNNPSGTSGWRA--PE 220
Query: 212 LGIEQSRRD-----DLESLGYVLLYFL-RGSLPW 239
L E ++R D+ S+G V Y L +G P+
Sbjct: 221 LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 188
+ ++ Q+ ++++HS H DI+P+N + R+++ + II+FG A++ + P N
Sbjct: 102 REIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQ-TRRSSTIKIIEFGQARQLK-PGDN 159
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKK 248
+ L Y + H S D+ SLG ++ L G P+ A T +
Sbjct: 160 FRL-------LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL---AETNQ 209
Query: 249 QKYDKI 254
Q + I
Sbjct: 210 QIIENI 215
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTG 201
I ++H +HRDIK N L+ +A I DFGLA+ + + + G
Sbjct: 146 INFLHENHHIHRDIKSANILLD---EAFTAKISDFGLAR-----ASEKFAQTVMXXRIVG 197
Query: 202 TARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238
T Y + G E + + D+ S G VLL + G LP
Sbjct: 198 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG-LP 232
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +F + +L + + +EY+ S+ FLHRD+ N L+ V + DFGL++
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV 170
Query: 183 RD 184
D
Sbjct: 171 LD 172
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +F + +L + + +EY+ S+ FLHRD+ N L+ V + DFGL++
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV 170
Query: 183 RD 184
D
Sbjct: 171 LD 172
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +F + +L + + +EY+ S+ FLHRD+ N L+ V + DFGL++
Sbjct: 105 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV 161
Query: 183 RD 184
D
Sbjct: 162 LD 163
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 88/234 (37%), Gaps = 46/234 (19%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
++IGSG FG + L ++ +++ I + EA+V L ++L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL----- 67
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDN--VLVLDLLG-PSLEDLFVYCRRKFSLK 129
YGV E LV + + L D R F+ +
Sbjct: 68 ------------------------YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE 103
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTTN 188
T+L + + + Y+ +HRD+ N L+G NQV + DFG+ + D
Sbjct: 104 TLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQ-- 157
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY--FLRGSLPWQ 240
Y + ++AS S + D+ S G VL++ F G +P++
Sbjct: 158 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG-VLMWEVFSEGKIPYE 206
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +F + +L + + +EY+ S+ FLHRD+ N L+ V + DFGL++
Sbjct: 98 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV 154
Query: 183 RD 184
D
Sbjct: 155 LD 156
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVK-IENSGTKHPQ-LLYEAKVYKILQGGS 63
K +++G G+FG + + + +T E+VAVK +++S +H + E ++ K LQ +
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVYC 122
I+ + +S+ G N+K L+++ L SL D
Sbjct: 74 ------------IVKYKGVCYSA---GRRNLK----------LIMEYLPYGSLRDYLQKH 108
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ +EY+ ++ ++HR++ N L+ N+V I DFGL K
Sbjct: 109 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILV---ENENRVKIGDFGLTK 163
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK---- 181
S L +A Q+ A + Y+ R F+HRD+ N L+G + V I DFGL++
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIADFGLSRNIYSA 227
Query: 182 -YRDPTTNRHIPYR 194
Y N IP R
Sbjct: 228 DYYKADGNDAIPIR 241
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 25/178 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI---ENSGTKHPQLLYEAKVYKILQGGSKI 65
+++ ++G+G FG + H DT E VA+K E S + E ++ K L + +
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 66 --RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
R V + + + L ++ G +++ Y E+ + + GP
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEG-GDLRKYLNQFENCCGLKE--GP---------- 123
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181
+ L + + + Y+H +HRD+KP+N ++ G + IID G AK+
Sbjct: 124 -------IRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 174
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 25/178 (14%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKI---ENSGTKHPQLLYEAKVYKILQGGSKI 65
+++ ++G+G FG + H DT E VA+K E S + E ++ K L + +
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 66 --RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR 123
R V + + + L ++ G +++ Y E+ + + GP
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEG-GDLRKYLNQFENCCGLKE--GP---------- 122
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181
+ L + + + Y+H +HRD+KP+N ++ G + IID G AK+
Sbjct: 123 -------IRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +F + +L + + +EY+ S+ FLHRD+ N L+ V + DFGL++
Sbjct: 94 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV 150
Query: 183 RD 184
D
Sbjct: 151 LD 152
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +F + +L + + +EY+ S+ FLHRD+ N L+ V + DFGL++
Sbjct: 99 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV 155
Query: 183 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY--FLRGSLPWQ 240
D Y ++ R++ + + S + D+ + G VL++ + G +P++
Sbjct: 156 LDD------EYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFG-VLMWEIYSLGKMPYE 208
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 123 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182
R +F + +L + + +EY+ S+ FLHRD+ N L+ V + DFGL++
Sbjct: 99 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV 155
Query: 183 RD 184
D
Sbjct: 156 LD 157
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 88/234 (37%), Gaps = 46/234 (19%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
++IGSG FG + L ++ +++ I + EA+V L ++L
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL----- 70
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDN--VLVLDLLG-PSLEDLFVYCRRKFSLK 129
YGV E LV + + L D R F+ +
Sbjct: 71 ------------------------YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE 106
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTTN 188
T+L + + + Y+ +HRD+ N L+G NQV + DFG+ + D
Sbjct: 107 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQ-- 160
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY--FLRGSLPWQ 240
Y + ++AS S + D+ S G VL++ F G +P++
Sbjct: 161 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG-VLMWEVFSEGKIPYE 209
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 88/234 (37%), Gaps = 46/234 (19%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
++IGSG FG + L ++ +++ I + EA+V L ++L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL----- 67
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDN--VLVLDLLG-PSLEDLFVYCRRKFSLK 129
YGV E LV + + L D R F+ +
Sbjct: 68 ------------------------YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE 103
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTTN 188
T+L + + + Y+ +HRD+ N L+G NQV + DFG+ + D
Sbjct: 104 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQ-- 157
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY--FLRGSLPWQ 240
Y + ++AS S + D+ S G VL++ F G +P++
Sbjct: 158 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG-VLMWEVFSEGKIPYE 206
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 39/174 (22%)
Query: 15 IGSGSFGEIFLASHVDTNEI----VAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRL 67
+GSG+FG ++ V E VA+KI N T + + + EA L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEA-------------L 92
Query: 68 VVFHVDHV-IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
++ +DH ++ L + S T+ + + +G E D +G L L +C
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL--LLNWC---- 146
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ +A M+ Y+ R +HRD+ N L+ + N V I DFGLA+
Sbjct: 147 -----VQIAKGMM----YLEERRLVHRDLAARNVLV---KSPNHVKITDFGLAR 188
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 14/131 (10%)
Query: 105 VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164
+L+ G +++ + + R + + ++ Q + + Y+H +HRD+K N L L
Sbjct: 84 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL 143
Query: 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYAS-----CNTHLGIEQSRR 219
+ + DFG++ K N + + GT + + C T +
Sbjct: 144 D---GDIKLADFGVSAK------NTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 220 DDLESLGYVLL 230
D+ SLG L+
Sbjct: 195 ADVWSLGITLI 205
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 88/234 (37%), Gaps = 46/234 (19%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
++IGSG FG + L ++ +++ I + EA+V L ++L
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL----- 65
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDN--VLVLDLLG-PSLEDLFVYCRRKFSLK 129
YGV E LV + + L D R F+ +
Sbjct: 66 ------------------------YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE 101
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTTN 188
T+L + + + Y+ +HRD+ N L+G NQV + DFG+ + D
Sbjct: 102 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQ-- 155
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY--FLRGSLPWQ 240
Y + ++AS S + D+ S G VL++ F G +P++
Sbjct: 156 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG-VLMWEVFSEGKIPYE 204
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 89/234 (38%), Gaps = 46/234 (19%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
++IGSG FG + L ++ +++ I+ + EA+V L ++L
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQL----- 87
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDN--VLVLDLLG-PSLEDLFVYCRRKFSLK 129
YGV E LV + + L D R F+ +
Sbjct: 88 ------------------------YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE 123
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTTN 188
T+L + + + Y+ +HRD+ N L+G NQV + DFG+ + D
Sbjct: 124 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQ-- 177
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY--FLRGSLPWQ 240
Y + ++AS S + D+ S G VL++ F G +P++
Sbjct: 178 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG-VLMWEVFSEGKIPYE 226
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 131 VLMLADQMIARIEYVHSRG-----FLHRDIKPDN-FLMGLGRKANQVYIIDFGLAKKYRD 184
VL + Q+ ++ H R LHRD+KP N FL G V + DFGLA+
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG----KQNVKLGDFGLARILNH 168
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA 244
T+ K GT Y S + + + D+ SLG LLY L +P A
Sbjct: 169 DTSF-------AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG-CLLYELCALMP--PFTA 218
Query: 245 ATKKQKYDKICEKK 258
++K+ KI E K
Sbjct: 219 FSQKELAGKIREGK 232
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 39/174 (22%)
Query: 15 IGSGSFGEIFLASHVDTNEI----VAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRL 67
+GSG+FG ++ V E VA+KI N T + + + EA L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEA-------------L 69
Query: 68 VVFHVDHV-IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
++ +DH ++ L + S T+ + + +G E D +G L L +C
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL--LLNWCV--- 124
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
Q+ + Y+ R +HRD+ N L+ + N V I DFGLA+
Sbjct: 125 ----------QIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVKITDFGLAR 165
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 117 DLFVYCR---RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173
DL + R R ++K ++ Q+ +EY+ + F+HRD+ N ++ ++ V +
Sbjct: 109 DLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD---ESFTVKV 165
Query: 174 IDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
DFGLA RD + +++++ ++ + + + + D+ S G +L L
Sbjct: 166 ADFGLA---RDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
Query: 234 -RGSLPWQ 240
RG+ P++
Sbjct: 223 TRGAPPYR 230
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 39/174 (22%)
Query: 14 KIGSGSFGEIFLASH-VDTNEI-VAVKIENSGTKHP---QLLYEAKVYKILQGGSKIRLV 68
++G G+FG + + + +I VA+K+ GT+ +++ EA++ L +RL+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 69 VFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSL 128
+ A ++ + G G L V R + +
Sbjct: 77 G------VCQAEALMLVMEMAG---------------------GGPLHKFLVGKREEIPV 109
Query: 129 KTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY--IIDFGLAK 180
V L Q+ ++Y+ + F+HRD+ N L+ N+ Y I DFGL+K
Sbjct: 110 SNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL-----VNRHYAKISDFGLSK 158
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 88/234 (37%), Gaps = 46/234 (19%)
Query: 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHV 72
++IGSG FG + L ++ +++ I + EA+V L ++L
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL----- 68
Query: 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDN--VLVLDLLG-PSLEDLFVYCRRKFSLK 129
YGV E LV + + L D R F+ +
Sbjct: 69 ------------------------YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAE 104
Query: 130 TVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYRDPTTN 188
T+L + + + Y+ +HRD+ N L+G NQV + DFG+ + D
Sbjct: 105 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQ-- 158
Query: 189 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY--FLRGSLPWQ 240
Y + ++AS S + D+ S G VL++ F G +P++
Sbjct: 159 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG-VLMWEVFSEGKIPYE 207
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 23/128 (17%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN 196
Q++ + Y H +HRD+KP L+ + V + FG+A + +
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE------------ 187
Query: 197 KNLTGTARYASCNTHLGIEQSRRD------DLESLGYVLLYFLRGSLPWQGLKAATKKQK 250
L R + + + E +R+ D+ G +L L G LP+ G TK++
Sbjct: 188 SGLVAGGRVGTPH-FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG----TKERL 242
Query: 251 YDKICEKK 258
++ I + K
Sbjct: 243 FEGIIKGK 250
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 134 LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178
+A +++ + Y+H++G LH+D+K N G+ V I DFGL
Sbjct: 135 IAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGK----VVITDFGL 175
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 31/252 (12%)
Query: 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG--TKHPQLLYEAKVYKILQGGSKIR 66
Y+L IG G F + + +T + AVKI + T P L E L+ + I
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED-----LKREASIC 80
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKF 126
++ H H + ++ + + G+ + + +DG D L +++ + + FVY
Sbjct: 81 HMLKHP-----HIVELLETYSSDGMLYMVFEFMDGAD--LCFEIVKRA-DAGFVY----- 127
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
S Q++ + Y H +HRD+KP L+ + V + FG+A + +
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187
Query: 187 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246
GT + + + D+ G +L L G LP+ G T
Sbjct: 188 LV-------AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG----T 236
Query: 247 KKQKYDKICEKK 258
K++ ++ I + K
Sbjct: 237 KERLFEGIIKGK 248
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 131 VLMLADQMIARIEYVHSRG-----FLHRDIKPDN-FLMGLGRKANQVYIIDFGLAKKYRD 184
VL + Q+ ++ H R LHRD+KP N FL G V + DFGLA+
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG----KQNVKLGDFGLARILNH 168
Query: 185 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA 244
T+ K GT Y S + + + D+ SLG LLY L +P A
Sbjct: 169 DTSF-------AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLG-CLLYELCALMP--PFTA 218
Query: 245 ATKKQKYDKICEKK 258
++K+ KI E K
Sbjct: 219 FSQKELAGKIREGK 232
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 37/157 (23%)
Query: 150 FLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCN 209
+HRDIKP N L+ ++ + + DFG++ + D R A C
Sbjct: 147 IIHRDIKPSNILLD---RSGNIKLCDFGISGQLVDSIAK--------------TRDAGCR 189
Query: 210 THLGIEQ-----SR-----RDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV 259
++ E+ SR R D+ SLG L G P+ + +D++ +
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-----FDQLTQVVK 244
Query: 260 STPIEVLCKSHPAEFASYF----HYCQSLTFDQRPDY 292
P + L S EF+ F + C + +RP Y
Sbjct: 245 GDPPQ-LSNSEEREFSPSFINFVNLCLTKDESKRPKY 280
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 72/187 (38%), Gaps = 32/187 (17%)
Query: 134 LADQMIARIEYVHSR-GFLHRDIKPDNFLM-GLGRKANQVYIIDFGLAKKYRDPTTNR-- 189
+A ++ +E++HS+ +HRD+KP N L+ LG QV DFG++ D
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG----QVKXCDFGISGYLVDDVAKDID 196
Query: 190 ------HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243
P R N L S + D+ SLG + P+
Sbjct: 197 AGCKPYXAPERINPELNQKGY------------SVKSDIWSLGITXIELAILRFPYDSW- 243
Query: 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL-KRLFHDL 302
T Q+ ++ E+ +P ++ AEF + C +RP Y L + F L
Sbjct: 244 -GTPFQQLKQVVEE--PSP-QLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTL 299
Query: 303 FSREGYD 309
+G D
Sbjct: 300 HESKGTD 306
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 60/136 (44%), Gaps = 24/136 (17%)
Query: 131 VLMLADQMIARIEYVHSRG-----FLHRDIKPDN-FLMGLGRKANQVYIIDFGLAKKYRD 184
VL + Q+ ++ H R LHRD+KP N FL G V + DFGLA
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG----KQNVKLGDFGLA----- 163
Query: 185 PTTNRHIPYREN--KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242
R + + E+ K GT Y S + + + D+ SLG LLY L +P
Sbjct: 164 ----RILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLG-CLLYELCALMP--PF 216
Query: 243 KAATKKQKYDKICEKK 258
A ++K+ KI E K
Sbjct: 217 TAFSQKELAGKIREGK 232
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 79 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 111
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 112 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 168
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 169 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 224 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMRKCWMIDADSRPKF 269
>pdb|2VK2|A Chain A, Crystal Structure Of A Galactofuranose Binding Protein
Length = 306
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 62 GSKIRLVVFHVDHVIIHALTII-----------FSSTLGGIPNIKWYGVDGEDNV---LV 107
G I +V H D ++I A+ I + ++ G+P+I +DGE N L
Sbjct: 189 GKNICMVYAHNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMMDGEANASVELT 248
Query: 108 LDLLGPSLEDLFVYCR-----RKFSL-KTVLMLADQMIARIEYVHSRGFLH 152
++ GP+ + L Y + K +L K+ L L D +E + G+L
Sbjct: 249 PNMAGPAFDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGYLE 299
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 8 KYKLGRKIGSGSFGEIF--LASHVDTNEI---VAVKIENSGT---KHPQLLYEAKVYKIL 59
K + R++G GSFG ++ +A V +E VA+K N + + L EA V K
Sbjct: 11 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 70
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF 119
+RL+ V+ + L ++K Y L L P +E+
Sbjct: 71 NCHHVVRLL-----GVVSQGQPTLVIMELMTRGDLKSY----------LRSLRPEMENNP 115
Query: 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
V SL ++ +A ++ + Y+++ F+HRD+ N ++ + V I DFG+
Sbjct: 116 VLAPP--SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT 170
Query: 180 KKYRDPTTNR 189
+ + R
Sbjct: 171 RDIXETDXXR 180
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 8 KYKLGRKIGSGSFGEIF--LASHVDTNEI---VAVKIENSGT---KHPQLLYEAKVYKIL 59
K + R++G GSFG ++ +A V +E VA+K N + + L EA V K
Sbjct: 20 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 79
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF 119
+RL+ V+ + L ++K Y L L P +E+
Sbjct: 80 NCHHVVRLL-----GVVSQGQPTLVIMELMTRGDLKSY----------LRSLRPEMENNP 124
Query: 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
V SL ++ +A ++ + Y+++ F+HRD+ N ++ + V I DFG+
Sbjct: 125 VLAPP--SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT 179
Query: 180 KKYRDPTTNR 189
+ + R
Sbjct: 180 RDIXETDXXR 189
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 86 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 118
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 119 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 175
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 176 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 230
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 231 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMRKCWMIDADSRPKF 276
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 8 KYKLGRKIGSGSFGEIF--LASHVDTNEI---VAVKIENSGT---KHPQLLYEAKVYKIL 59
K + R++G GSFG ++ +A V +E VA+K N + + L EA V K
Sbjct: 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 85
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF 119
+RL+ V+ + L ++K Y L L P +E+
Sbjct: 86 NCHHVVRLL-----GVVSQGQPTLVIMELMTRGDLKSY----------LRSLRPEMENNP 130
Query: 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
V SL ++ +A ++ + Y+++ F+HRD+ N ++ + V I DFG+
Sbjct: 131 VLAPP--SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT 185
Query: 180 K 180
+
Sbjct: 186 R 186
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 111/293 (37%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G +LD + +++
Sbjct: 73 NPHVCRL------------LGICLTSTVQLITQLMPFGC-------LLDYVREHKDNI-- 111
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ L + +A+ M Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 112 --GSQYLLNWCVQIAEGM----NYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 162
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 163 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 217
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 218 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 263
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 76 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 108
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 165
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 166 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 221 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMRKCWMIDADSRPKF 266
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 8 KYKLGRKIGSGSFGEIF--LASHVDTNEI---VAVKIENSGT---KHPQLLYEAKVYKIL 59
K + R++G GSFG ++ +A V +E VA+K N + + L EA V K
Sbjct: 13 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 72
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF 119
+RL+ V+ + L ++K Y L L P +E+
Sbjct: 73 NCHHVVRLL-----GVVSQGQPTLVIMELMTRGDLKSY----------LRSLRPEMENNP 117
Query: 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
V SL ++ +A ++ + Y+++ F+HRD+ N ++ + V I DFG+
Sbjct: 118 VLAPP--SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT 172
Query: 180 K 180
+
Sbjct: 173 R 173
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 82 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 114
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 115 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 171
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 172 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 226
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 227 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 272
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 8 KYKLGRKIGSGSFGEIF--LASHVDTNEI---VAVKIENSGT---KHPQLLYEAKVYKIL 59
K + R++G GSFG ++ +A V +E VA+K N + + L EA V K
Sbjct: 17 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 76
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF 119
+RL+ V+ + L ++K Y L L P +E+
Sbjct: 77 NCHHVVRLL-----GVVSQGQPTLVIMELMTRGDLKSY----------LRSLRPEMENNP 121
Query: 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
V SL ++ +A ++ + Y+++ F+HRD+ N ++ + V I DFG+
Sbjct: 122 VLAPP--SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT 176
Query: 180 K 180
+
Sbjct: 177 R 177
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 8 KYKLGRKIGSGSFGEIF--LASHVDTNEI---VAVKIENSGT---KHPQLLYEAKVYKIL 59
K + R++G GSFG ++ +A V +E VA+K N + + L EA V K
Sbjct: 19 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 78
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF 119
+RL+ V+ + L ++K Y L L P +E+
Sbjct: 79 NCHHVVRLL-----GVVSQGQPTLVIMELMTRGDLKSY----------LRSLRPEMENNP 123
Query: 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
V SL ++ +A ++ + Y+++ F+HRD+ N ++ + V I DFG+
Sbjct: 124 VLAPP--SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT 178
Query: 180 K 180
+
Sbjct: 179 R 179
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 8 KYKLGRKIGSGSFGEIF--LASHVDTNEI---VAVKIENSGT---KHPQLLYEAKVYKIL 59
K + R++G GSFG ++ +A V +E VA+K N + + L EA V K
Sbjct: 20 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 79
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF 119
+RL+ V+ + L ++K Y L L P +E+
Sbjct: 80 NCHHVVRLL-----GVVSQGQPTLVIMELMTRGDLKSY----------LRSLRPEMENNP 124
Query: 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
V SL ++ +A ++ + Y+++ F+HRD+ N ++ + V I DFG+
Sbjct: 125 VLAPP--SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT 179
Query: 180 K 180
+
Sbjct: 180 R 180
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 37/173 (21%)
Query: 15 IGSGSFGEIFLASHVDTNE----IVAVKI--ENSGTK-HPQLLYEAKVYKILQGGSKIRL 67
+GSG+FG ++ + E VA+K+ EN+ K + ++L EA V + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS 127
L I +ST+ + + YG L D R +
Sbjct: 85 ------------LGICLTSTVQLVTQLMPYG---------------CLLDHVRENRGRLG 117
Query: 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ +L Q+ + Y+ +HRD+ N L+ + N V I DFGLA+
Sbjct: 118 SQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLV---KSPNHVKITDFGLAR 167
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 78 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 110
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 111 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 167
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 168 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 223 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 268
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 8 KYKLGRKIGSGSFGEIF--LASHVDTNEI---VAVKIENSGT---KHPQLLYEAKVYKIL 59
K + R++G GSFG ++ +A V +E VA+K N + + L EA V K
Sbjct: 19 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 78
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF 119
+RL+ V+ + L ++K Y L L P +E+
Sbjct: 79 NCHHVVRLL-----GVVSQGQPTLVIMELMTRGDLKSY----------LRSLRPEMENNP 123
Query: 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
V SL ++ +A ++ + Y+++ F+HRD+ N ++ + V I DFG+
Sbjct: 124 VLAPP--SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT 178
Query: 180 K 180
+
Sbjct: 179 R 179
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 83 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 115
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 116 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 172
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 173 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 228 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 101 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 133
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 134 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 190
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 191 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 245
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 246 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 291
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R ++ ++ A Q+ ++Y+ +HRD+ N L+ GRK I DFGL++
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMK---ISDFGLSR 198
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 79 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 111
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 112 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 168
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 169 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 224 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 269
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 79 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 111
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 112 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 168
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 169 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 224 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 269
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 76 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 108
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 165
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 166 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 221 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 266
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 76 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------XLLDYVR 108
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 165
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 166 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 221 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 266
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 8 KYKLGRKIGSGSFGEIF--LASHVDTNEI---VAVKIENSGT---KHPQLLYEAKVYKIL 59
K + R++G GSFG ++ +A V +E VA+K N + + L EA V K
Sbjct: 48 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 107
Query: 60 QGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLF 119
+RL+ V+ + L ++K Y L L P +E+
Sbjct: 108 NCHHVVRLL-----GVVSQGQPTLVIMELMTRGDLKSY----------LRSLRPEMENNP 152
Query: 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179
V SL ++ +A ++ + Y+++ F+HRD+ N ++ + V I DFG+
Sbjct: 153 VLAPP--SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMT 207
Query: 180 K 180
+
Sbjct: 208 R 208
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 80 NPHVCRL------------LGICLTSTVQLIMQLMPFG---------------CLLDYVR 112
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 113 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 169
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 170 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 225 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 270
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 98/275 (35%), Gaps = 55/275 (20%)
Query: 8 KYKLGRKIGSGSFGEIF-LASHVDTNEIVAVKI-ENSGTKHPQLLYEAKVYKILQGGSKI 65
+Y++ +G G+FG++ H VA+KI N G E V K ++ K
Sbjct: 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 79
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP-SLEDLFVYCRR 124
L ++ S W+ G + +LLG + E L +
Sbjct: 80 NKF-----------LCVLMSD---------WFNFHGH-MCIAFELLGKNTFEFLKENNFQ 118
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR----------------KA 168
+ L V +A Q+ + ++H H D+KP+N L K
Sbjct: 119 PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN 178
Query: 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYV 228
+ + DFG A + + + T Y L + ++ D+ S+G +
Sbjct: 179 TSIRVADFGSAT----------FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCI 228
Query: 229 LLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 263
L + RG +Q T + + + +K+ PI
Sbjct: 229 LFEYYRGFTLFQ-----THENREHLVMMEKILGPI 258
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181
+++ + Y+HS G ++ D+KP+N ++ Q+ +ID G +
Sbjct: 190 EILPALSYLHSIGLVYNDLKPENIML----TEEQLKLIDLGAVSR 230
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 70 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 102
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 103 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 159
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 160 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 214
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 215 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 260
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 110 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 142
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 143 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 199
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 200 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 254
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 255 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 300
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 79 NPHVCRL------------LGICLTSTVQLIMQLMPFG---------------CLLDYVR 111
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 112 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 168
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 169 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 224 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 269
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 106 LVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165
LV +L+ L + R S + + ++ + +H G +HRD+ P N L+
Sbjct: 111 LVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA-- 168
Query: 166 RKANQVYIIDFGLAKK 181
N + I DF LA++
Sbjct: 169 -DNNDITICDFNLARE 183
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R ++ ++ A Q+ ++Y+ +HRD+ N L+ GRK I DFGL++
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMK---ISDFGLSR 198
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 124 RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
R ++ ++ A Q+ ++Y+ +HRD+ N L+ GRK I DFGL++
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMK---ISDFGLSR 198
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 76 NPHVCRL------------LGICLTSTVQLIMQLMPFG---------------CLLDYVR 108
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 165
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 166 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 221 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 266
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQV-YIIDFGLAKK 181
+ Y+H+R +HRD+K N L+ N V I DFG++KK
Sbjct: 152 LHYLHTRAIIHRDVKSINILL----DENFVPKITDFGISKK 188
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQV-YIIDFGLAKK 181
+ Y+H+R +HRD+K N L+ N V I DFG++KK
Sbjct: 152 LHYLHTRAIIHRDVKSINILL----DENFVPKITDFGISKK 188
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 78 NPHVCRL------------LGICLTSTVQLIMQLMPFG---------------CLLDYVR 110
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 111 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 167
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 168 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 223 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 268
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 106 LVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165
LV +L+ L + R S + + ++ + +H G +HRD+ P N L+
Sbjct: 111 LVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA-- 168
Query: 166 RKANQVYIIDFGLAKK 181
N + I DF LA++
Sbjct: 169 -DNNDITICDFNLARE 183
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 98/275 (35%), Gaps = 55/275 (20%)
Query: 8 KYKLGRKIGSGSFGEIF-LASHVDTNEIVAVKI-ENSGTKHPQLLYEAKVYKILQGGSKI 65
+Y++ +G G+FG++ H VA+KI N G E V K ++ K
Sbjct: 29 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 88
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP-SLEDLFVYCRR 124
L ++ S W+ G + +LLG + E L +
Sbjct: 89 NKF-----------LCVLMSD---------WFNFHGH-MCIAFELLGKNTFEFLKENNFQ 127
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR----------------KA 168
+ L V +A Q+ + ++H H D+KP+N L K
Sbjct: 128 PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN 187
Query: 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYV 228
+ + DFG A + + + T Y L + ++ D+ S+G +
Sbjct: 188 TSIRVADFGSAT----------FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCI 237
Query: 229 LLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 263
L + RG +Q T + + + +K+ PI
Sbjct: 238 LFEYYRGFTLFQ-----THENREHLVMMEKILGPI 267
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 77 NPHVCRL------------LGICLTSTVQLIMQLMPFG---------------CLLDYVR 109
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 110 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 166
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 167 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 222 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 267
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 77 NPHVCRL------------LGICLTSTVQLIMQLMPFG---------------XLLDYVR 109
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFGLAK
Sbjct: 110 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAK 166
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 167 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 222 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 267
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 98/275 (35%), Gaps = 55/275 (20%)
Query: 8 KYKLGRKIGSGSFGEIF-LASHVDTNEIVAVKI-ENSGTKHPQLLYEAKVYKILQGGSKI 65
+Y++ +G G+FG++ H VA+KI N G E V K ++ K
Sbjct: 52 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 111
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP-SLEDLFVYCRR 124
L ++ S W+ G + +LLG + E L +
Sbjct: 112 NKF-----------LCVLMSD---------WFNFHGH-MCIAFELLGKNTFEFLKENNFQ 150
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR----------------KA 168
+ L V +A Q+ + ++H H D+KP+N L K
Sbjct: 151 PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN 210
Query: 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYV 228
+ + DFG A + + + T Y L + ++ D+ S+G +
Sbjct: 211 TSIRVADFGSAT----------FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCI 260
Query: 229 LLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 263
L + RG +Q T + + + +K+ PI
Sbjct: 261 LFEYYRGFTLFQ-----THENREHLVMMEKILGPI 290
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 38/185 (20%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVK--IENSGTKHPQLLYEAKVYKILQGGSKI 65
++++ R G G+FG + L T VA+K I++ ++ +L +I+Q
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL-------QIMQD---- 72
Query: 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC--- 122
L V H H I L F TLG + + + L+++ + D C
Sbjct: 73 -LAVLH--HPNIVQLQSYFY-TLG----------ERDRRDIYLNVVMEYVPDTLHRCCRN 118
Query: 123 --RRKFSLKTVLM--LADQMIARIEYVH--SRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176
RR+ + +L+ Q+I I +H S HRDIKP N L + + + DF
Sbjct: 119 YYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL--VNEADGTLKLCDF 176
Query: 177 GLAKK 181
G AKK
Sbjct: 177 GSAKK 181
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++K ++ Q+ ++Y+ S+ F+HRD+ N ++ + V + DFGLA+ D
Sbjct: 129 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE 185
Query: 187 TNRHIPYRENKNLTGT---ARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPW 239
Y N TG ++ + + + + + D+ S G +L + RG+ P+
Sbjct: 186 ------YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++K ++ Q+ ++Y+ S+ F+HRD+ N ++ + V + DFGLA+ D
Sbjct: 128 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE 184
Query: 187 TNRHIPYRENKNLTGT---ARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPW 239
Y N TG ++ + + + + + D+ S G +L + RG+ P+
Sbjct: 185 ------YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++K ++ Q+ ++Y+ S+ F+HRD+ N ++ + V + DFGLA+ D
Sbjct: 131 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE 187
Query: 187 TNRHIPYRENKNLTGT---ARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPW 239
Y N TG ++ + + + + + D+ S G +L + RG+ P+
Sbjct: 188 ------YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++K ++ Q+ ++Y+ S+ F+HRD+ N ++ + V + DFGLA+ D
Sbjct: 130 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE 186
Query: 187 TNRHIPYRENKNLTGT---ARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPW 239
Y N TG ++ + + + + + D+ S G +L + RG+ P+
Sbjct: 187 ------YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++K ++ Q+ ++Y+ S+ F+HRD+ N ++ + V + DFGLA+ D
Sbjct: 123 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE 179
Query: 187 TNRHIPYRENKNLTGT---ARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPW 239
Y N TG ++ + + + + + D+ S G +L + RG+ P+
Sbjct: 180 ------YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++K ++ Q+ ++Y+ S+ F+HRD+ N ++ + V + DFGLA+ D
Sbjct: 131 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE 187
Query: 187 TNRHIPYRENKNLTGT---ARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPW 239
Y N TG ++ + + + + + D+ S G +L + RG+ P+
Sbjct: 188 ------YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++K ++ Q+ ++Y+ S+ F+HRD+ N ++ + V + DFGLA+ D
Sbjct: 149 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE 205
Query: 187 TNRHIPYRENKNLTGT---ARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPW 239
Y N TG ++ + + + + + D+ S G +L + RG+ P+
Sbjct: 206 ------YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 104/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 78 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 110
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFG AK
Sbjct: 111 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGRAK 167
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 168 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 223 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMRKCWMIDADSRPKF 268
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++K ++ Q+ ++Y+ S+ F+HRD+ N ++ + V + DFGLA+ D
Sbjct: 126 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE 182
Query: 187 TNRHIPYRENKNLTGT---ARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPW 239
Y N TG ++ + + + + + D+ S G +L + RG+ P+
Sbjct: 183 ------YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 186
++K ++ Q+ ++Y+ S+ F+HRD+ N ++ + V + DFGLA+ D
Sbjct: 150 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKE 206
Query: 187 TNRHIPYRENKNLTGT---ARYASCNTHLGIEQSRRDDLESLGYVLLYFL-RGSLPW 239
Y N TG ++ + + + + + D+ S G +L + RG+ P+
Sbjct: 207 ------YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
S + +L A + ++Y+ + F+HRD+ N L+G A I DFGL++
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK---IADFGLSR 180
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
S + +L A + ++Y+ + F+HRD+ N L+G A I DFGL++
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK---IADFGLSR 190
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 185
+ + V +A Q+ ++++H H D+KP+N L N Y + + L KK RD
Sbjct: 134 YPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILF-----VNSDYELTYNLEKK-RDE 187
Query: 186 TTNRHIPYR------------ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233
+ + R + + T Y + L + S+ D+ S+G ++ +
Sbjct: 188 RSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 247
Query: 234 RG 235
G
Sbjct: 248 VG 249
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 155 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 129 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 178 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 104/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 78 NPHVCRL------------LGICLTSTVQLIMQLMPFG---------------CLLDYVR 110
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFG AK
Sbjct: 111 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGRAK 167
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 168 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 223 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMRKCWMIDADSRPKF 268
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 144 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 154 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM---GLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ G GR A I DFG+A+
Sbjct: 164 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK---IGDFGMAR 218
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
++ +L +A + +Y+ F+HRDI N L+ I DFG+A+
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 104/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 83 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 115
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFG AK
Sbjct: 116 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGRAK 172
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 173 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 228 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 273
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 128 LKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFG 177
++ + + ++ Y+H+ + HRD+KP N LM K +V + DFG
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD---KNGRVKLSDFG 197
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 104/293 (35%), Gaps = 50/293 (17%)
Query: 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKI-------ENSGTKHPQLLYEAKVYKILQ 60
++K + +GSG+FG ++ + E V + + S + ++L EA V +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV 120
RL L I +ST+ I + +G L D
Sbjct: 76 NPHVCRL------------LGICLTSTVQLITQLMPFG---------------CLLDYVR 108
Query: 121 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
+ + +L Q+ + Y+ R +HRD+ N L+ + V I DFG AK
Sbjct: 109 EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGRAK 165
Query: 181 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239
H + ++ + + L + + D+ S G + + GS P+
Sbjct: 166 LLGAEEKEYH-----AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Query: 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292
G+ A+ + I EK P +C + C + D RP +
Sbjct: 221 DGIPAS----EISSILEKGERLPQPPICT---IDVYMIMVKCWMIDADSRPKF 266
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 127 SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184
++K ++ Q+ ++Y+ S+ F+HRD+ N ++ + V + DFGLA+ D
Sbjct: 130 TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYD 184
>pdb|1Z1B|A Chain A, Crystal Structure Of A Lambda Integrase Dimer Bound To A
Coc' Core Site
pdb|1Z1B|B Chain B, Crystal Structure Of A Lambda Integrase Dimer Bound To A
Coc' Core Site
Length = 356
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 27/141 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEA--KVYKILQGG-SKIR 66
KL R S +F E H+ TN + A + S + +L + K+Y+ + +R
Sbjct: 141 KLIRSTLSDAFREAIAEGHITTNHVAATRAAKSKVRRSRLTADEYLKIYQAAESSPCWLR 200
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYG-VDGE--------------DNVLVLDLL 111
L + L ++ +G + +KW VDG L +D L
Sbjct: 201 LAM---------ELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDAL 251
Query: 112 GPSLEDLFVYCRRKFSLKTVL 132
G S+++ C+ +T++
Sbjct: 252 GISMKETLDKCKEILGGETII 272
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQ---LLYEAKV 55
+ KLG+ +G G+FG++ A T VAVK+ G H + L+ E K+
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 83
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 146 HSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARY 205
H HRDIK N L+ + I DFGLA K+ + + GT RY
Sbjct: 148 HKPAISHRDIKSKNVLL---KNNLTACIADFGLALKFEAGKSA-----GDTHGQVGTRRY 199
Query: 206 ASCNTHLGIEQSRRD-----DLESLGYVL 229
+ G +RD D+ ++G VL
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVL 228
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQ---LLYEAKV 55
+ KLG+ +G G+FG++ A T VAVK+ G H + L+ E K+
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 85
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180
S + +L A + ++Y+ + F+HR++ N L+G A I DFGL++
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAK---IADFGLSR 187
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQ---LLYEAKV 55
+ KLG+ +G G+FG++ A T VAVK+ G H + L+ E K+
Sbjct: 21 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 76
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 8 KYKLGRKIGSGSFGEIFLA-----SHVDTNEIVAVKIENSGTKHPQ---LLYEAKV 55
+ KLG+ +G G+FG++ A T VAVK+ G H + L+ E K+
Sbjct: 23 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 78
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 125 KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY-IIDFGLAKKYR 183
+F++ ++ + + A + Y+ G++HRD+ N L+ +N V + DFGL++
Sbjct: 141 QFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILV----NSNLVCKVSDFGLSRVIE 196
Query: 184 D------PTTNRHIPYR 194
D TT IP R
Sbjct: 197 DDPEAVYTTTGGKIPVR 213
>pdb|1P7D|A Chain A, Crystal Structure Of The Lambda Integrase (Residues
75-356) Bound To Dna
pdb|1P7D|B Chain B, Crystal Structure Of The Lambda Integrase (Residues
75-356) Bound To Dna
Length = 283
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 27/141 (19%)
Query: 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEA--KVYKILQGG-SKIR 66
KL R S +F E H+ TN + A + S + +L + K+Y+ + +R
Sbjct: 68 KLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLR 127
Query: 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYG-VDGE--------------DNVLVLDLL 111
L + L ++ +G + +KW VDG L +D L
Sbjct: 128 LAM---------ELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDAL 178
Query: 112 GPSLEDLFVYCRRKFSLKTVL 132
G S+++ C+ +T++
Sbjct: 179 GISMKETLDKCKEILGGETII 199
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,969,800
Number of Sequences: 62578
Number of extensions: 586052
Number of successful extensions: 3002
Number of sequences better than 100.0: 997
Number of HSP's better than 100.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 1417
Number of HSP's gapped (non-prelim): 1413
length of query: 449
length of database: 14,973,337
effective HSP length: 102
effective length of query: 347
effective length of database: 8,590,381
effective search space: 2980862207
effective search space used: 2980862207
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)