Query 013125
Match_columns 449
No_of_seqs 277 out of 2113
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 00:39:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013125.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013125hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1163 Casein kinase (serine/ 100.0 8.8E-60 1.9E-64 410.7 22.6 298 3-326 11-308 (341)
2 KOG1165 Casein kinase (serine/ 100.0 3E-57 6.6E-62 411.5 29.7 291 4-320 25-317 (449)
3 KOG0615 Serine/threonine prote 100.0 9.7E-50 2.1E-54 372.1 16.6 255 4-297 169-436 (475)
4 KOG0598 Ribosomal protein S6 k 100.0 2.8E-49 6.1E-54 366.3 18.1 260 4-318 22-291 (357)
5 KOG0592 3-phosphoinositide-dep 100.0 1.5E-48 3.3E-53 375.4 22.0 265 7-319 73-349 (604)
6 KOG0595 Serine/threonine-prote 100.0 1.8E-47 3.9E-52 357.3 27.7 247 7-294 10-264 (429)
7 KOG0581 Mitogen-activated prot 100.0 1.4E-48 2.9E-53 361.9 17.2 254 6-305 78-340 (364)
8 KOG0575 Polo-like serine/threo 100.0 1.5E-47 3.2E-52 374.3 24.2 251 7-305 18-274 (592)
9 KOG0593 Predicted protein kina 100.0 4.9E-48 1.1E-52 347.4 16.3 254 7-297 2-283 (396)
10 KOG0600 Cdc2-related protein k 100.0 2.5E-46 5.4E-51 357.3 26.1 263 6-304 116-404 (560)
11 KOG0197 Tyrosine kinases [Sign 100.0 6.2E-47 1.3E-51 366.3 17.7 255 7-305 206-464 (468)
12 KOG0661 MAPK related serine/th 100.0 2.6E-47 5.6E-52 361.6 14.4 257 4-297 7-290 (538)
13 KOG0192 Tyrosine kinase specif 100.0 1.5E-45 3.3E-50 357.3 25.1 256 6-306 40-307 (362)
14 KOG0591 NIMA (never in mitosis 100.0 1.6E-47 3.4E-52 340.9 10.1 245 7-292 19-275 (375)
15 KOG0659 Cdk activating kinase 100.0 6.9E-46 1.5E-50 328.2 18.0 287 7-350 2-295 (318)
16 KOG0663 Protein kinase PITSLRE 100.0 1.6E-46 3.5E-51 341.8 12.8 287 7-342 76-368 (419)
17 KOG0605 NDR and related serine 100.0 3.6E-45 7.7E-50 352.4 21.8 270 4-321 138-458 (550)
18 KOG0616 cAMP-dependent protein 100.0 2.3E-45 5E-50 329.5 18.1 235 6-289 43-283 (355)
19 KOG0667 Dual-specificity tyros 100.0 1.7E-44 3.8E-49 356.5 23.4 305 2-344 181-511 (586)
20 KOG0198 MEKK and related serin 100.0 2.7E-44 5.9E-49 338.5 17.5 253 7-297 17-275 (313)
21 KOG0583 Serine/threonine prote 100.0 4.1E-43 9E-48 343.2 26.4 247 4-296 14-273 (370)
22 KOG0660 Mitogen-activated prot 100.0 5.2E-44 1.1E-48 330.1 18.6 257 5-295 20-307 (359)
23 KOG0610 Putative serine/threon 100.0 7.7E-44 1.7E-48 333.1 18.7 268 7-320 77-404 (459)
24 KOG0694 Serine/threonine prote 100.0 1.7E-43 3.7E-48 349.6 21.0 243 4-292 365-613 (694)
25 KOG0597 Serine-threonine prote 100.0 6.8E-43 1.5E-47 336.8 21.3 245 7-297 2-250 (808)
26 KOG0578 p21-activated serine/t 100.0 2.4E-43 5.2E-48 342.2 17.8 247 7-297 273-522 (550)
27 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.8E-42 1E-46 336.4 25.1 263 3-305 3-337 (338)
28 KOG0582 Ste20-like serine/thre 100.0 8.3E-42 1.8E-46 321.9 23.7 258 4-297 23-292 (516)
29 KOG1026 Nerve growth factor re 100.0 6.7E-43 1.5E-47 354.0 17.3 260 5-306 484-766 (774)
30 KOG0201 Serine/threonine prote 100.0 6.7E-43 1.5E-47 329.1 15.9 253 6-305 12-268 (467)
31 KOG0193 Serine/threonine prote 100.0 9.5E-43 2.1E-47 339.2 16.1 259 4-304 389-655 (678)
32 PHA02882 putative serine/threo 100.0 3.7E-41 8E-46 323.7 26.8 279 1-299 6-293 (294)
33 KOG0658 Glycogen synthase kina 100.0 1.1E-42 2.5E-47 321.7 15.2 252 7-296 24-304 (364)
34 KOG0588 Serine/threonine prote 100.0 5.6E-42 1.2E-46 336.6 20.8 244 7-297 12-262 (786)
35 KOG0594 Protein kinase PCTAIRE 100.0 7.3E-42 1.6E-46 316.8 20.1 291 8-344 12-311 (323)
36 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.3E-41 1.2E-45 321.6 25.5 249 7-296 5-283 (288)
37 cd05612 STKc_PRKX_like Catalyt 100.0 2.8E-41 6E-46 324.0 23.2 236 7-291 1-242 (291)
38 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.4E-41 1.4E-45 328.2 25.9 260 8-297 1-289 (338)
39 cd05631 STKc_GRK4 Catalytic do 100.0 4.7E-41 1E-45 321.5 23.4 242 8-291 1-249 (285)
40 PTZ00036 glycogen synthase kin 100.0 7.9E-41 1.7E-45 338.3 25.8 260 4-297 63-350 (440)
41 KOG4721 Serine/threonine prote 100.0 1.2E-42 2.6E-47 335.0 11.8 238 11-300 128-366 (904)
42 KOG0585 Ca2+/calmodulin-depend 100.0 8.9E-42 1.9E-46 323.6 17.2 256 3-296 93-370 (576)
43 cd05096 PTKc_DDR1 Catalytic do 100.0 1.1E-40 2.4E-45 321.8 25.2 262 4-300 2-303 (304)
44 PTZ00263 protein kinase A cata 100.0 5.3E-41 1.1E-45 327.7 22.7 237 6-291 17-259 (329)
45 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.4E-41 9.6E-46 328.9 21.9 247 7-297 1-256 (333)
46 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.4E-40 5.2E-45 319.4 26.7 253 6-297 4-287 (303)
47 cd07848 STKc_CDKL5 Catalytic d 100.0 1.2E-40 2.6E-45 318.7 24.3 251 7-296 1-282 (287)
48 cd05587 STKc_cPKC Catalytic do 100.0 1E-40 2.2E-45 325.0 24.2 240 8-292 1-246 (324)
49 cd07862 STKc_CDK6 Catalytic do 100.0 4.8E-40 1E-44 315.0 26.7 254 7-296 1-285 (290)
50 cd05571 STKc_PKB Catalytic dom 100.0 7.7E-41 1.7E-45 325.8 21.1 237 13-295 1-248 (323)
51 KOG0033 Ca2+/calmodulin-depend 100.0 1.2E-42 2.6E-47 304.1 7.5 252 4-295 8-264 (355)
52 cd05064 PTKc_EphR_A10 Catalyti 100.0 3E-40 6.4E-45 312.7 24.4 256 4-302 2-265 (266)
53 PHA03212 serine/threonine kina 100.0 3.6E-40 7.7E-45 328.5 26.1 196 5-241 90-285 (391)
54 KOG1290 Serine/threonine prote 100.0 3.9E-41 8.5E-46 320.1 18.1 311 2-343 72-558 (590)
55 PTZ00284 protein kinase; Provi 100.0 1.6E-40 3.5E-45 339.3 24.1 209 5-245 127-351 (467)
56 KOG4278 Protein tyrosine kinas 100.0 8.9E-41 1.9E-45 324.7 20.8 260 7-309 267-530 (1157)
57 KOG0194 Protein tyrosine kinas 100.0 2.5E-41 5.5E-46 332.2 16.7 259 5-307 155-425 (474)
58 cd05616 STKc_cPKC_beta Catalyt 100.0 3.8E-40 8.3E-45 320.9 24.5 240 8-292 1-246 (323)
59 cd05106 PTKc_CSF-1R Catalytic 100.0 4.5E-40 9.8E-45 326.4 24.4 257 6-303 37-373 (374)
60 KOG0580 Serine/threonine prote 100.0 2.8E-41 6.1E-46 294.9 13.7 246 5-297 20-272 (281)
61 PTZ00426 cAMP-dependent protei 100.0 3.4E-40 7.5E-45 323.1 22.9 238 4-290 27-271 (340)
62 cd05628 STKc_NDR1 Catalytic do 100.0 5.3E-40 1.2E-44 325.0 23.8 252 7-296 1-291 (363)
63 cd06650 PKc_MEK1 Catalytic dom 100.0 8.9E-40 1.9E-44 319.6 25.0 273 3-317 1-316 (333)
64 KOG4717 Serine/threonine prote 100.0 1.2E-40 2.6E-45 317.9 18.2 248 5-297 16-269 (864)
65 cd05585 STKc_YPK1_like Catalyt 100.0 2.6E-40 5.5E-45 320.5 20.8 239 15-299 1-245 (312)
66 KOG0671 LAMMER dual specificit 100.0 3.3E-42 7.2E-47 319.2 7.1 303 2-341 84-412 (415)
67 cd07863 STKc_CDK4 Catalytic do 100.0 2.7E-39 5.9E-44 309.4 26.7 256 8-296 1-283 (288)
68 cd06649 PKc_MEK2 Catalytic dom 100.0 2.5E-39 5.3E-44 316.3 26.8 254 4-297 2-300 (331)
69 cd05589 STKc_PKN Catalytic dom 100.0 1.3E-39 2.9E-44 317.2 24.4 238 9-293 1-247 (324)
70 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-39 2.7E-44 317.2 24.0 240 8-292 1-246 (323)
71 cd05599 STKc_NDR_like Catalyti 100.0 4.7E-40 1E-44 325.6 21.3 249 7-291 1-286 (364)
72 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.2E-39 4.8E-44 313.5 25.5 254 7-297 6-285 (309)
73 cd05595 STKc_PKB_beta Catalyti 100.0 8.4E-40 1.8E-44 318.4 22.5 232 13-290 1-238 (323)
74 PTZ00266 NIMA-related protein 100.0 2.2E-38 4.7E-43 335.5 34.9 256 2-297 8-294 (1021)
75 KOG2345 Serine/threonine prote 100.0 5.2E-41 1.1E-45 294.5 12.5 271 3-302 17-300 (302)
76 cd05104 PTKc_Kit Catalytic dom 100.0 1.3E-39 2.9E-44 323.3 24.2 256 6-302 34-374 (375)
77 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.3E-40 5E-45 326.0 18.6 253 7-297 1-284 (350)
78 cd05605 STKc_GRK4_like Catalyt 100.0 1.7E-39 3.8E-44 310.6 24.0 242 8-291 1-249 (285)
79 cd05614 STKc_MSK2_N N-terminal 100.0 9.6E-40 2.1E-44 319.3 22.4 244 8-292 1-256 (332)
80 KOG0032 Ca2+/calmodulin-depend 100.0 1.7E-39 3.6E-44 317.7 23.9 252 5-297 33-292 (382)
81 cd05593 STKc_PKB_gamma Catalyt 100.0 9.8E-40 2.1E-44 318.6 22.3 238 13-296 1-249 (328)
82 cd05108 PTKc_EGFR Catalytic do 100.0 2.8E-39 6E-44 313.9 25.3 258 4-304 4-270 (316)
83 PTZ00283 serine/threonine prot 100.0 1.6E-39 3.4E-44 332.9 24.6 261 3-297 28-296 (496)
84 KOG1095 Protein tyrosine kinas 100.0 6.4E-40 1.4E-44 343.6 22.2 260 4-305 689-964 (1025)
85 cd05601 STKc_CRIK Catalytic do 100.0 5.6E-40 1.2E-44 320.7 20.2 247 7-296 1-261 (330)
86 cd07876 STKc_JNK2 Catalytic do 100.0 2.1E-39 4.5E-44 320.4 24.4 255 5-297 19-314 (359)
87 cd05592 STKc_nPKC_theta_delta 100.0 2.4E-39 5.1E-44 314.3 23.7 235 13-293 1-242 (316)
88 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-39 3.5E-44 323.6 22.3 254 7-297 1-304 (381)
89 cd05048 PTKc_Ror Catalytic Dom 100.0 3E-39 6.6E-44 308.3 23.1 256 4-301 2-282 (283)
90 cd05597 STKc_DMPK_like Catalyt 100.0 3.2E-39 7E-44 315.4 23.7 250 7-295 1-263 (331)
91 cd05109 PTKc_HER2 Catalytic do 100.0 1E-38 2.3E-43 304.1 26.5 261 1-304 1-270 (279)
92 KOG0596 Dual specificity; seri 100.0 2.3E-40 5E-45 319.1 15.0 254 4-297 358-626 (677)
93 cd05591 STKc_nPKC_epsilon Cata 100.0 2.5E-39 5.5E-44 314.8 22.6 234 13-292 1-241 (321)
94 cd05629 STKc_NDR_like_fungal C 100.0 1.3E-39 2.7E-44 324.0 20.8 253 7-295 1-302 (377)
95 KOG0589 Serine/threonine prote 100.0 3.2E-40 7E-45 318.6 15.9 250 6-298 3-258 (426)
96 cd05054 PTKc_VEGFR Catalytic d 100.0 4.4E-39 9.4E-44 315.1 24.0 261 4-304 4-335 (337)
97 PHA02988 hypothetical protein; 100.0 4.3E-39 9.4E-44 307.5 23.5 246 13-303 26-280 (283)
98 PHA03207 serine/threonine kina 100.0 4.9E-39 1.1E-43 321.2 24.9 255 4-297 89-374 (392)
99 KOG1164 Casein kinase (serine/ 100.0 2.7E-38 5.9E-43 307.0 29.4 287 8-320 19-315 (322)
100 cd05590 STKc_nPKC_eta Catalyti 100.0 3.2E-39 6.9E-44 314.0 22.9 235 13-293 1-242 (320)
101 cd05052 PTKc_Abl Catalytic dom 100.0 5.5E-39 1.2E-43 303.3 23.8 256 4-302 3-262 (263)
102 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.2E-39 7E-44 314.9 22.9 238 13-293 1-249 (327)
103 cd05620 STKc_nPKC_delta Cataly 100.0 4.1E-39 9E-44 312.6 23.5 235 13-293 1-242 (316)
104 cd05598 STKc_LATS Catalytic do 100.0 1E-39 2.2E-44 324.6 19.7 253 7-295 1-298 (376)
105 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.6E-39 7.8E-44 316.7 23.1 254 5-297 13-297 (343)
106 cd05596 STKc_ROCK Catalytic do 100.0 3.6E-39 7.9E-44 319.6 23.0 251 5-297 41-303 (370)
107 cd05071 PTKc_Src Catalytic dom 100.0 1.6E-38 3.5E-43 300.1 26.2 255 4-303 3-261 (262)
108 PLN00034 mitogen-activated pro 100.0 3E-39 6.5E-44 318.5 22.0 245 7-297 74-327 (353)
109 cd05594 STKc_PKB_alpha Catalyt 100.0 1.5E-39 3.2E-44 317.1 19.3 238 13-296 1-250 (325)
110 cd07875 STKc_JNK1 Catalytic do 100.0 6.7E-39 1.5E-43 317.3 24.0 205 5-244 22-230 (364)
111 KOG0577 Serine/threonine prote 100.0 3.9E-40 8.6E-45 318.9 14.7 242 8-296 27-276 (948)
112 cd05624 STKc_MRCK_beta Catalyt 100.0 2.7E-39 5.9E-44 315.9 20.9 244 7-290 1-255 (331)
113 cd05625 STKc_LATS1 Catalytic d 100.0 2.2E-39 4.8E-44 322.8 20.6 253 7-295 1-302 (382)
114 KOG1989 ARK protein kinase fam 100.0 1.5E-38 3.3E-43 323.8 26.7 265 6-304 36-313 (738)
115 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.2E-38 2.6E-43 318.0 25.5 258 6-304 36-399 (400)
116 cd07874 STKc_JNK3 Catalytic do 100.0 8.9E-39 1.9E-43 315.4 24.3 255 5-297 15-310 (355)
117 cd05618 STKc_aPKC_iota Catalyt 100.0 7.4E-39 1.6E-43 312.6 23.3 237 13-292 1-250 (329)
118 cd07868 STKc_CDK8 Catalytic do 100.0 2.5E-38 5.4E-43 307.2 26.8 202 12-242 6-219 (317)
119 cd05584 STKc_p70S6K Catalytic 100.0 7E-39 1.5E-43 312.0 23.0 233 12-290 1-243 (323)
120 cd05627 STKc_NDR2 Catalytic do 100.0 2.4E-39 5.2E-44 320.0 19.8 267 7-318 1-303 (360)
121 KOG0690 Serine/threonine prote 100.0 1.8E-40 3.8E-45 301.1 10.5 241 4-290 165-411 (516)
122 cd05570 STKc_PKC Catalytic dom 100.0 8.8E-39 1.9E-43 310.6 23.2 234 13-292 1-241 (318)
123 cd05623 STKc_MRCK_alpha Cataly 100.0 5.3E-39 1.2E-43 314.0 21.7 250 7-295 1-263 (332)
124 cd05632 STKc_GRK5 Catalytic do 100.0 1.7E-38 3.8E-43 303.7 24.7 243 8-292 1-250 (285)
125 KOG0662 Cyclin-dependent kinas 100.0 1.4E-39 3E-44 272.5 14.8 283 7-342 2-290 (292)
126 cd05111 PTK_HER3 Pseudokinase 100.0 2.6E-38 5.7E-43 301.5 25.6 257 5-304 5-270 (279)
127 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-38 2.5E-43 309.4 23.5 235 13-293 1-242 (316)
128 KOG0611 Predicted serine/threo 100.0 6.2E-40 1.3E-44 305.2 13.7 245 5-297 51-302 (668)
129 cd05621 STKc_ROCK2 Catalytic d 100.0 6.1E-39 1.3E-43 317.7 21.7 252 4-297 40-303 (370)
130 cd05588 STKc_aPKC Catalytic do 100.0 1E-38 2.2E-43 311.6 22.9 237 13-292 1-250 (329)
131 cd05608 STKc_GRK1 Catalytic do 100.0 1.3E-38 2.9E-43 303.7 23.0 236 15-292 1-246 (280)
132 cd05115 PTKc_Zap-70 Catalytic 100.0 2.4E-38 5.2E-43 298.1 24.5 248 14-303 2-256 (257)
133 cd08228 STKc_Nek6 Catalytic do 100.0 3.1E-38 6.8E-43 298.6 25.4 255 7-302 2-265 (267)
134 cd07853 STKc_NLK Catalytic dom 100.0 1.2E-38 2.5E-43 316.6 23.0 258 8-297 1-287 (372)
135 cd06646 STKc_MAP4K5 Catalytic 100.0 1E-38 2.2E-43 302.1 21.5 256 1-297 3-264 (267)
136 cd05622 STKc_ROCK1 Catalytic d 100.0 1.2E-38 2.5E-43 316.0 22.8 252 3-297 39-303 (371)
137 cd05630 STKc_GRK6 Catalytic do 100.0 2.8E-38 6.1E-43 302.3 24.3 242 8-291 1-249 (285)
138 KOG0986 G protein-coupled rece 100.0 9.7E-40 2.1E-44 308.0 13.8 247 4-292 182-435 (591)
139 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.4E-38 7.3E-43 301.2 24.7 260 6-302 2-281 (283)
140 cd05049 PTKc_Trk Catalytic dom 100.0 1.7E-38 3.8E-43 302.5 22.6 254 5-300 3-279 (280)
141 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.1E-38 8.9E-43 296.8 24.7 254 3-301 2-259 (260)
142 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.5E-38 9.8E-43 303.2 25.3 254 7-297 6-285 (301)
143 cd05093 PTKc_TrkB Catalytic do 100.0 5E-38 1.1E-42 301.0 25.4 261 4-306 2-283 (288)
144 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.6E-38 5.6E-43 301.1 23.2 258 4-300 3-276 (277)
145 PTZ00267 NIMA-related protein 100.0 2.6E-38 5.6E-43 323.4 24.8 250 6-297 66-322 (478)
146 PHA03211 serine/threonine kina 100.0 1.7E-38 3.8E-43 320.7 23.2 198 4-240 166-363 (461)
147 cd05602 STKc_SGK1 Catalytic do 100.0 9.3E-39 2E-43 311.4 20.2 236 13-294 1-243 (325)
148 cd05068 PTKc_Frk_like Catalyti 100.0 7.7E-38 1.7E-42 295.1 25.7 255 3-301 2-260 (261)
149 cd05072 PTKc_Lyn Catalytic dom 100.0 3.2E-38 6.9E-43 297.6 23.0 254 4-301 3-260 (261)
150 cd05575 STKc_SGK Catalytic dom 100.0 1.5E-38 3.2E-43 309.7 21.3 235 13-293 1-242 (323)
151 cd05097 PTKc_DDR_like Catalyti 100.0 3.4E-38 7.4E-43 303.1 23.5 261 5-300 3-294 (295)
152 cd05582 STKc_RSK_N N-terminal 100.0 3.6E-39 7.9E-44 313.3 16.9 237 12-294 1-245 (318)
153 cd05069 PTKc_Yes Catalytic dom 100.0 6.8E-38 1.5E-42 295.4 24.9 253 4-301 3-259 (260)
154 cd05062 PTKc_IGF-1R Catalytic 100.0 4E-38 8.7E-43 299.7 23.5 255 4-300 3-276 (277)
155 PRK13184 pknD serine/threonine 100.0 7.5E-38 1.6E-42 330.2 27.7 263 7-305 2-293 (932)
156 PHA03209 serine/threonine kina 100.0 4.1E-38 8.9E-43 310.7 24.1 192 6-239 65-256 (357)
157 cd05090 PTKc_Ror1 Catalytic do 100.0 6.1E-38 1.3E-42 299.4 24.4 252 7-300 5-281 (283)
158 cd05116 PTKc_Syk Catalytic dom 100.0 7E-38 1.5E-42 294.8 24.4 247 13-302 1-255 (257)
159 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-37 2.4E-42 294.9 25.6 255 6-302 3-265 (266)
160 cd05075 PTKc_Axl Catalytic dom 100.0 6.9E-38 1.5E-42 297.0 24.1 258 9-302 1-271 (272)
161 cd05114 PTKc_Tec_Rlk Catalytic 100.0 8.6E-38 1.9E-42 293.9 24.6 249 7-299 4-255 (256)
162 cd05607 STKc_GRK7 Catalytic do 100.0 4.7E-38 1E-42 299.4 23.0 240 15-296 1-248 (277)
163 cd05082 PTKc_Csk Catalytic dom 100.0 5.2E-38 1.1E-42 295.4 22.9 248 6-301 5-255 (256)
164 cd05095 PTKc_DDR2 Catalytic do 100.0 6.5E-38 1.4E-42 301.3 24.0 259 4-300 2-295 (296)
165 KOG0666 Cyclin C-dependent kin 100.0 1.9E-39 4.2E-44 292.9 12.2 300 7-346 24-348 (438)
166 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.8E-38 1.9E-42 311.6 25.4 259 4-303 34-400 (401)
167 cd05098 PTKc_FGFR1 Catalytic d 100.0 9.6E-38 2.1E-42 301.8 24.8 261 4-306 15-303 (307)
168 PF00069 Pkinase: Protein kina 100.0 3.9E-38 8.5E-43 296.3 21.6 250 9-297 1-256 (260)
169 cd05035 PTKc_Axl_like Catalyti 100.0 1.2E-37 2.6E-42 295.3 24.9 258 9-302 1-272 (273)
170 cd05103 PTKc_VEGFR2 Catalytic 100.0 9E-38 1.9E-42 306.7 24.8 261 5-305 5-342 (343)
171 cd05604 STKc_SGK3 Catalytic do 100.0 2.4E-38 5.2E-43 308.5 20.5 235 13-293 1-242 (325)
172 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.8E-38 1.9E-42 294.5 23.6 254 3-301 2-259 (260)
173 cd05084 PTKc_Fes Catalytic dom 100.0 1.2E-37 2.7E-42 292.1 24.3 246 13-300 1-251 (252)
174 KOG4257 Focal adhesion tyrosin 100.0 7.7E-39 1.7E-43 311.6 16.5 259 6-308 388-655 (974)
175 cd05051 PTKc_DDR Catalytic dom 100.0 7E-38 1.5E-42 300.9 22.9 261 5-300 3-295 (296)
176 cd05094 PTKc_TrkC Catalytic do 100.0 1.4E-37 3.1E-42 298.3 25.0 260 4-305 2-285 (291)
177 cd08529 STKc_FA2-like Catalyti 100.0 2.1E-37 4.6E-42 290.8 25.7 246 8-297 1-252 (256)
178 cd06613 STKc_MAP4K3_like Catal 100.0 1.5E-37 3.3E-42 292.8 24.7 252 6-297 2-259 (262)
179 cd05045 PTKc_RET Catalytic dom 100.0 1.3E-37 2.8E-42 298.3 24.5 256 8-305 1-289 (290)
180 cd05091 PTKc_Ror2 Catalytic do 100.0 3.1E-38 6.8E-43 301.4 20.1 254 6-301 4-282 (283)
181 cd07861 STKc_CDK1_euk Catalyti 100.0 2.1E-37 4.5E-42 295.8 25.6 253 8-297 1-281 (285)
182 KOG0612 Rho-associated, coiled 100.0 1.2E-39 2.5E-44 336.2 10.8 263 3-319 71-349 (1317)
183 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.5E-37 7.6E-42 291.1 26.9 255 7-302 2-265 (267)
184 cd05603 STKc_SGK2 Catalytic do 100.0 3E-38 6.6E-43 307.3 20.0 234 13-292 1-241 (321)
185 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-37 2.8E-42 292.9 23.6 250 6-299 3-255 (256)
186 cd05110 PTKc_HER4 Catalytic do 100.0 1.5E-37 3.3E-42 299.9 24.7 259 3-304 3-270 (303)
187 cd07839 STKc_CDK5 Catalytic do 100.0 1E-37 2.3E-42 297.8 23.2 251 8-297 1-280 (284)
188 KOG4279 Serine/threonine prote 100.0 3E-38 6.5E-43 310.5 19.6 243 14-297 582-831 (1226)
189 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.5E-37 5.3E-42 292.7 25.3 258 4-302 2-267 (268)
190 cd08219 STKc_Nek3 Catalytic do 100.0 1.1E-37 2.5E-42 292.8 22.7 246 8-297 1-251 (255)
191 cd05057 PTKc_EGFR_like Catalyt 100.0 3.3E-37 7.1E-42 293.8 26.1 261 2-305 2-271 (279)
192 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.5E-37 7.6E-42 301.5 26.7 262 4-307 9-298 (334)
193 cd05032 PTKc_InsR_like Catalyt 100.0 2.1E-37 4.5E-42 294.6 24.3 256 3-300 2-276 (277)
194 cd05055 PTKc_PDGFR Catalytic d 100.0 2.4E-37 5.2E-42 298.4 25.0 258 4-302 32-301 (302)
195 cd05066 PTKc_EphR_A Catalytic 100.0 2.3E-37 5E-42 292.9 24.4 257 5-302 2-266 (267)
196 cd06645 STKc_MAP4K3 Catalytic 100.0 7.5E-38 1.6E-42 296.1 21.0 252 5-297 7-264 (267)
197 cd05088 PTKc_Tie2 Catalytic do 100.0 1.8E-37 3.8E-42 299.4 24.0 257 6-307 6-285 (303)
198 cd07867 STKc_CDC2L6 Catalytic 100.0 3.8E-37 8.2E-42 298.8 26.4 202 12-242 6-219 (317)
199 cd06619 PKc_MKK5 Catalytic dom 100.0 1.6E-37 3.4E-42 296.1 23.3 244 7-297 1-252 (279)
200 KOG0574 STE20-like serine/thre 100.0 1.1E-40 2.5E-45 299.5 1.5 247 8-297 34-282 (502)
201 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-37 2.5E-42 294.7 22.1 255 7-302 2-265 (267)
202 cd06644 STKc_STK10_LOK Catalyt 100.0 1.5E-37 3.3E-42 298.2 23.2 252 4-297 9-268 (292)
203 cd05065 PTKc_EphR_B Catalytic 100.0 3.1E-37 6.7E-42 292.3 25.0 258 6-302 3-268 (269)
204 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.8E-38 1.3E-42 295.7 19.7 251 6-301 5-260 (261)
205 cd06637 STKc_TNIK Catalytic do 100.0 1.8E-37 3.9E-42 294.2 23.2 256 5-297 4-268 (272)
206 cd05061 PTKc_InsR Catalytic do 100.0 3.3E-37 7.2E-42 295.2 25.3 258 4-303 3-279 (288)
207 KOG0579 Ste20-like serine/thre 100.0 3E-39 6.5E-44 314.7 11.1 248 7-297 32-288 (1187)
208 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3E-37 6.6E-42 294.7 24.7 262 6-302 3-283 (284)
209 cd05059 PTKc_Tec_like Catalyti 100.0 2.2E-37 4.7E-42 291.3 23.3 250 6-299 3-255 (256)
210 cd07849 STKc_ERK1_2_like Catal 100.0 2.7E-37 5.8E-42 302.6 24.6 262 5-297 3-291 (336)
211 cd06625 STKc_MEKK3_like Cataly 100.0 3.9E-37 8.3E-42 290.3 24.8 250 7-297 2-259 (263)
212 cd05092 PTKc_TrkA Catalytic do 100.0 2.1E-37 4.5E-42 295.4 23.2 255 4-300 2-279 (280)
213 cd05089 PTKc_Tie1 Catalytic do 100.0 3.2E-37 7E-42 296.7 24.7 255 7-306 2-279 (297)
214 cd05043 PTK_Ryk Pseudokinase d 100.0 4.5E-37 9.7E-42 292.9 25.3 260 4-304 3-278 (280)
215 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.4E-37 7.4E-42 297.5 24.6 260 4-305 12-299 (304)
216 cd05053 PTKc_FGFR Catalytic do 100.0 3.2E-37 7E-42 295.9 24.3 258 4-303 9-292 (293)
217 cd07847 STKc_CDKL1_4 Catalytic 100.0 8E-37 1.7E-41 291.8 26.8 253 7-296 1-281 (286)
218 cd05034 PTKc_Src_like Catalyti 100.0 3.1E-37 6.8E-42 290.7 23.6 254 4-301 3-260 (261)
219 PF07714 Pkinase_Tyr: Protein 100.0 1.2E-37 2.6E-42 293.7 20.7 248 10-299 2-259 (259)
220 cd05586 STKc_Sck1_like Catalyt 100.0 3.4E-38 7.3E-43 308.1 17.5 236 15-292 1-243 (330)
221 cd06615 PKc_MEK Catalytic doma 100.0 5.5E-37 1.2E-41 296.7 25.7 257 7-305 1-292 (308)
222 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.2E-37 1.1E-41 297.6 25.5 261 4-306 9-297 (314)
223 cd08223 STKc_Nek4 Catalytic do 100.0 6.4E-37 1.4E-41 287.8 24.8 247 8-297 1-253 (257)
224 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.7E-37 5.9E-42 294.7 22.5 256 5-297 14-278 (282)
225 cd06654 STKc_PAK1 Catalytic do 100.0 4.1E-37 8.9E-42 295.9 23.9 248 6-297 19-269 (296)
226 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-36 2.4E-41 288.7 26.4 257 4-304 3-267 (270)
227 cd05060 PTKc_Syk_like Catalyti 100.0 6.6E-37 1.4E-41 288.0 24.4 247 13-302 1-255 (257)
228 cd06612 STKc_MST1_2 Catalytic 100.0 2.2E-37 4.7E-42 290.7 21.0 249 7-297 3-252 (256)
229 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.5E-37 7.5E-42 294.6 22.6 255 7-306 1-268 (286)
230 cd05073 PTKc_Hck Catalytic dom 100.0 8.1E-37 1.8E-41 288.0 24.8 254 3-301 2-259 (260)
231 cd05083 PTKc_Chk Catalytic dom 100.0 3.7E-37 8.1E-42 289.2 22.4 245 6-300 5-252 (254)
232 cd07845 STKc_CDK10 Catalytic d 100.0 9.8E-37 2.1E-41 295.0 25.9 257 6-297 6-289 (309)
233 cd06643 STKc_SLK Catalytic dom 100.0 3.3E-37 7.2E-42 294.2 22.2 249 7-297 5-261 (282)
234 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.9E-37 1.5E-41 289.4 23.9 251 8-297 1-263 (267)
235 cd05580 STKc_PKA Catalytic dom 100.0 9.9E-37 2.1E-41 292.3 25.3 235 7-290 1-241 (290)
236 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.1E-36 4.6E-41 290.0 27.4 251 7-296 5-286 (291)
237 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.4E-37 1.2E-41 293.1 23.0 261 7-302 4-283 (284)
238 cd06611 STKc_SLK_like Catalyti 100.0 2.1E-37 4.5E-42 295.2 20.1 250 6-297 4-261 (280)
239 cd07844 STKc_PCTAIRE_like Cata 100.0 1.1E-36 2.4E-41 291.9 25.2 251 7-296 5-286 (291)
240 KOG0696 Serine/threonine prote 100.0 3.1E-38 6.7E-43 294.5 13.8 244 3-291 345-594 (683)
241 cd07850 STKc_JNK Catalytic dom 100.0 1.1E-36 2.4E-41 300.3 25.7 256 4-297 13-310 (353)
242 cd06655 STKc_PAK2 Catalytic do 100.0 1.2E-36 2.6E-41 292.6 25.3 247 7-297 19-268 (296)
243 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.8E-37 8.2E-42 294.2 21.6 254 4-297 2-265 (284)
244 cd07832 STKc_CCRK Catalytic do 100.0 1.5E-36 3.3E-41 289.8 25.8 251 8-297 1-281 (286)
245 cd05039 PTKc_Csk_like Catalyti 100.0 7.9E-37 1.7E-41 287.2 23.0 249 4-301 3-255 (256)
246 cd07841 STKc_CDK7 Catalytic do 100.0 1.3E-36 2.8E-41 292.4 24.9 253 8-297 1-281 (298)
247 cd06630 STKc_MEKK1 Catalytic d 100.0 9.5E-37 2E-41 288.5 23.4 254 8-297 1-263 (268)
248 cd08221 STKc_Nek9 Catalytic do 100.0 3E-36 6.6E-41 283.2 26.6 246 8-297 1-252 (256)
249 cd06638 STKc_myosinIIIA Cataly 100.0 1.6E-36 3.5E-41 289.9 25.0 256 5-297 16-282 (286)
250 cd07837 STKc_CdkB_plant Cataly 100.0 2.3E-36 4.9E-41 290.2 26.0 260 7-297 1-290 (295)
251 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.6E-36 3.5E-41 289.8 24.6 253 7-297 1-282 (286)
252 cd05050 PTKc_Musk Catalytic do 100.0 1.1E-36 2.3E-41 291.6 23.4 254 5-300 3-287 (288)
253 cd06617 PKc_MKK3_6 Catalytic d 100.0 1E-36 2.2E-41 290.7 23.1 248 7-297 1-260 (283)
254 cd06609 STKc_MST3_like Catalyt 100.0 9.5E-37 2.1E-41 289.7 22.6 246 7-297 1-250 (274)
255 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.4E-36 3E-41 287.9 23.5 249 13-299 1-267 (269)
256 cd05058 PTKc_Met_Ron Catalytic 100.0 2.1E-36 4.5E-41 285.3 24.6 253 13-304 1-261 (262)
257 cd05574 STKc_phototropin_like 100.0 2.3E-36 4.9E-41 293.3 25.4 249 7-291 1-278 (316)
258 cd07831 STKc_MOK Catalytic dom 100.0 2.8E-36 6.1E-41 287.4 25.4 250 9-297 1-278 (282)
259 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 8.8E-37 1.9E-41 291.1 21.9 262 6-302 3-283 (284)
260 cd08220 STKc_Nek8 Catalytic do 100.0 2.1E-36 4.6E-41 284.0 24.1 246 8-297 1-252 (256)
261 cd06656 STKc_PAK3 Catalytic do 100.0 8.4E-37 1.8E-41 293.9 21.6 248 6-297 18-268 (297)
262 KOG0196 Tyrosine kinase, EPH ( 100.0 4.2E-38 9E-43 313.8 12.8 262 4-306 626-895 (996)
263 KOG0607 MAP kinase-interacting 100.0 1.8E-37 4E-42 280.9 15.8 254 12-295 83-358 (463)
264 cd08227 PK_STRAD_alpha Pseudok 100.0 8.9E-37 1.9E-41 297.7 22.0 254 11-297 2-306 (327)
265 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.4E-36 3.1E-41 297.5 23.6 260 5-297 3-290 (337)
266 KOG0599 Phosphorylase kinase g 100.0 1.2E-37 2.7E-42 276.6 14.3 249 7-297 17-282 (411)
267 KOG0199 ACK and related non-re 100.0 8E-38 1.7E-42 308.0 14.5 252 6-299 109-369 (1039)
268 cd07842 STKc_CDK8_like Catalyt 100.0 4.6E-36 1E-40 290.8 26.6 261 8-297 1-312 (316)
269 PHA03210 serine/threonine kina 100.0 5.7E-37 1.2E-41 314.8 21.3 201 4-240 145-369 (501)
270 cd06640 STKc_MST4 Catalytic do 100.0 1.4E-36 2.9E-41 289.3 22.4 246 6-297 3-252 (277)
271 cd00192 PTKc Catalytic domain 100.0 2E-36 4.4E-41 284.5 23.3 245 13-299 1-261 (262)
272 cd05042 PTKc_Aatyk Catalytic d 100.0 2.1E-36 4.6E-41 286.6 23.5 248 13-299 1-267 (269)
273 cd07866 STKc_BUR1 Catalytic do 100.0 2.5E-36 5.3E-41 292.0 24.4 269 6-296 7-306 (311)
274 KOG1187 Serine/threonine prote 100.0 8.3E-37 1.8E-41 298.2 21.1 255 7-302 75-352 (361)
275 cd07855 STKc_ERK5 Catalytic do 100.0 1.9E-36 4.2E-41 296.2 23.6 263 5-297 3-293 (334)
276 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.3E-36 1.1E-40 286.8 26.0 254 7-297 1-265 (287)
277 cd07865 STKc_CDK9 Catalytic do 100.0 4E-36 8.8E-41 290.3 25.3 263 7-297 12-306 (310)
278 KOG0584 Serine/threonine prote 100.0 7.8E-38 1.7E-42 306.8 13.3 250 10-305 43-301 (632)
279 cd05609 STKc_MAST Catalytic do 100.0 3.6E-36 7.8E-41 290.5 24.9 258 7-300 1-272 (305)
280 cd06607 STKc_TAO Catalytic dom 100.0 3E-36 6.6E-41 291.3 24.3 247 4-297 12-266 (307)
281 cd06639 STKc_myosinIIIB Cataly 100.0 4.4E-36 9.6E-41 287.8 25.2 255 6-297 21-286 (291)
282 cd07836 STKc_Pho85 Catalytic d 100.0 5E-36 1.1E-40 286.1 25.3 253 8-297 1-280 (284)
283 cd07833 STKc_CDKL Catalytic do 100.0 3.5E-36 7.6E-41 287.7 24.1 255 7-297 1-284 (288)
284 PLN00009 cyclin-dependent kina 100.0 9E-36 1.9E-40 286.1 27.0 252 7-297 2-283 (294)
285 cd06616 PKc_MKK4 Catalytic dom 100.0 1.2E-36 2.6E-41 291.2 20.8 251 7-297 4-266 (288)
286 cd06651 STKc_MEKK3 Catalytic d 100.0 4.1E-36 8.9E-41 284.2 24.1 251 7-297 2-260 (266)
287 cd05085 PTKc_Fer Catalytic dom 100.0 4.8E-36 1E-40 280.8 24.1 243 13-299 1-248 (250)
288 cd06631 STKc_YSK4 Catalytic do 100.0 4.8E-36 1E-40 283.4 24.3 252 8-297 1-261 (265)
289 cd06652 STKc_MEKK2 Catalytic d 100.0 6.9E-36 1.5E-40 282.4 25.2 251 7-297 2-260 (265)
290 cd05047 PTKc_Tie Catalytic dom 100.0 2.4E-36 5.2E-41 286.5 22.1 246 13-303 1-269 (270)
291 cd07860 STKc_CDK2_3 Catalytic 100.0 6.9E-36 1.5E-40 285.2 25.4 252 8-296 1-279 (284)
292 cd05046 PTK_CCK4 Pseudokinase 100.0 3E-36 6.4E-41 286.4 22.7 253 6-300 4-274 (275)
293 cd05112 PTKc_Itk Catalytic dom 100.0 8.2E-36 1.8E-40 280.2 25.5 250 6-299 3-255 (256)
294 cd07854 STKc_MAPK4_6 Catalytic 100.0 5E-36 1.1E-40 294.2 25.0 272 5-297 3-299 (342)
295 KOG2052 Activin A type IB rece 100.0 9.8E-37 2.1E-41 287.5 19.0 269 2-304 206-505 (513)
296 KOG1094 Discoidin domain recep 100.0 2.9E-37 6.3E-42 298.9 15.8 263 3-301 534-803 (807)
297 cd05633 STKc_GRK3 Catalytic do 100.0 5.2E-36 1.1E-40 285.7 24.3 236 14-291 1-243 (279)
298 cd08217 STKc_Nek2 Catalytic do 100.0 5.4E-36 1.2E-40 282.3 24.0 248 8-297 1-261 (265)
299 cd06605 PKc_MAPKK Catalytic do 100.0 1E-36 2.2E-41 287.8 19.0 248 7-297 1-256 (265)
300 cd08218 STKc_Nek1 Catalytic do 100.0 3.3E-36 7.2E-41 282.9 22.5 246 8-297 1-252 (256)
301 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.2E-36 9.1E-41 283.7 23.1 255 7-297 1-263 (267)
302 cd05040 PTKc_Ack_like Catalyti 100.0 4.6E-36 1E-40 282.1 23.2 247 13-300 1-256 (257)
303 cd07864 STKc_CDK12 Catalytic d 100.0 4E-36 8.7E-41 289.5 23.0 270 2-297 2-298 (302)
304 cd05578 STKc_Yank1 Catalytic d 100.0 2.6E-36 5.6E-41 284.1 21.2 241 8-292 1-247 (258)
305 cd05041 PTKc_Fes_like Catalyti 100.0 7.7E-36 1.7E-40 279.6 24.1 245 13-300 1-250 (251)
306 cd07843 STKc_CDC2L1 Catalytic 100.0 3.6E-36 7.7E-41 288.7 22.1 256 7-297 5-289 (293)
307 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.4E-36 9.5E-41 283.5 22.3 240 13-299 1-261 (262)
308 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.2E-35 2.6E-40 289.8 26.0 252 5-297 8-287 (328)
309 cd06608 STKc_myosinIII_like Ca 100.0 6E-36 1.3E-40 283.7 23.0 256 6-297 5-271 (275)
310 cd06629 STKc_MAPKKK_Bck1_like 100.0 7.9E-36 1.7E-40 283.0 23.8 251 8-297 2-268 (272)
311 cd07852 STKc_MAPK15 Catalytic 100.0 5.3E-36 1.1E-40 293.5 23.2 264 2-297 2-294 (337)
312 KOG4250 TANK binding protein k 100.0 4.4E-37 9.5E-42 305.1 15.6 209 6-243 12-228 (732)
313 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.2E-36 2.6E-41 289.6 18.1 246 6-297 3-252 (277)
314 KOG0670 U4/U6-associated splic 100.0 1.2E-37 2.6E-42 297.9 11.1 231 1-266 426-659 (752)
315 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-36 2.5E-41 292.1 18.0 247 7-297 22-271 (292)
316 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.2E-36 2.6E-41 286.6 17.6 240 13-299 1-257 (258)
317 cd06623 PKc_MAPKK_plant_like C 100.0 1.4E-35 3.1E-40 279.5 24.7 249 7-297 1-255 (264)
318 cd05044 PTKc_c-ros Catalytic d 100.0 4.4E-36 9.6E-41 284.2 21.2 249 13-300 1-268 (269)
319 KOG0669 Cyclin T-dependent kin 100.0 3.1E-39 6.8E-44 283.7 -0.5 227 5-256 15-246 (376)
320 cd06635 STKc_TAO1 Catalytic do 100.0 1.5E-35 3.3E-40 287.7 25.3 246 5-297 23-276 (317)
321 KOG0983 Mitogen-activated prot 100.0 3.2E-37 6.9E-42 274.0 12.1 265 9-316 94-365 (391)
322 cd06632 STKc_MEKK1_plant Catal 100.0 1.1E-35 2.3E-40 279.4 23.2 245 8-297 1-254 (258)
323 cd07835 STKc_CDK1_like Catalyt 100.0 1.4E-35 2.9E-40 283.1 24.3 249 9-297 1-279 (283)
324 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5E-36 1.1E-40 281.9 21.0 239 13-299 1-258 (259)
325 KOG0586 Serine/threonine prote 100.0 9.7E-37 2.1E-41 298.7 16.5 245 6-297 55-305 (596)
326 smart00219 TyrKc Tyrosine kina 100.0 1.5E-35 3.3E-40 278.3 23.7 247 9-298 1-257 (258)
327 cd06917 STKc_NAK1_like Catalyt 100.0 6.6E-36 1.4E-40 284.3 21.5 245 8-297 2-254 (277)
328 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.2E-35 4.7E-40 289.8 25.9 254 5-297 13-297 (343)
329 cd06618 PKc_MKK7 Catalytic dom 100.0 9.7E-36 2.1E-40 286.2 22.8 260 4-307 12-280 (296)
330 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.4E-35 5.3E-40 289.7 25.9 255 4-297 14-299 (345)
331 cd05118 STKc_CMGC Catalytic do 100.0 1.3E-35 2.8E-40 282.9 23.2 252 9-297 1-279 (283)
332 cd07857 STKc_MPK1 Catalytic do 100.0 2.8E-35 6.1E-40 287.8 26.1 260 8-297 1-291 (332)
333 cd07838 STKc_CDK4_6_like Catal 100.0 3.6E-35 7.7E-40 280.4 26.3 255 9-296 1-282 (287)
334 PTZ00024 cyclin-dependent prot 100.0 1.7E-35 3.7E-40 289.6 24.5 263 1-297 2-312 (335)
335 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.1E-35 4.5E-40 279.1 24.1 250 7-296 2-259 (264)
336 cd05606 STKc_beta_ARK Catalyti 100.0 1.9E-35 4.2E-40 281.6 24.1 241 14-296 1-253 (278)
337 cd07879 STKc_p38delta_MAPK13 C 100.0 2.4E-35 5.2E-40 289.4 25.3 253 5-297 13-296 (342)
338 cd06624 STKc_ASK Catalytic dom 100.0 3.1E-35 6.6E-40 278.5 25.2 248 9-297 10-264 (268)
339 cd07834 STKc_MAPK Catalytic do 100.0 1.5E-35 3.3E-40 289.3 23.7 257 8-297 1-288 (330)
340 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 7.6E-36 1.6E-40 283.8 20.9 239 14-299 2-273 (274)
341 KOG0604 MAP kinase-activated p 100.0 1.1E-36 2.3E-41 273.9 13.8 255 6-295 60-319 (400)
342 cd08225 STKc_Nek5 Catalytic do 100.0 1.4E-35 3E-40 278.6 22.2 247 8-297 1-253 (257)
343 cd06659 STKc_PAK6 Catalytic do 100.0 7E-36 1.5E-40 287.4 20.4 246 8-297 22-270 (297)
344 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.1E-35 6.6E-40 278.7 24.4 248 13-299 1-266 (268)
345 cd06626 STKc_MEKK4 Catalytic d 100.0 4.7E-35 1E-39 276.1 25.6 252 8-297 1-260 (264)
346 cd06647 STKc_PAK_I Catalytic d 100.0 8.9E-36 1.9E-40 286.1 20.8 248 6-297 18-268 (293)
347 cd06641 STKc_MST3 Catalytic do 100.0 2.6E-35 5.5E-40 280.5 23.5 245 7-297 4-252 (277)
348 cd06633 STKc_TAO3 Catalytic do 100.0 2.9E-35 6.2E-40 285.3 24.2 245 6-297 20-272 (313)
349 cd08215 STKc_Nek Catalytic dom 100.0 3.5E-35 7.7E-40 275.4 23.5 246 8-297 1-254 (258)
350 KOG4236 Serine/threonine prote 100.0 3.6E-37 7.7E-42 294.9 9.8 241 12-293 569-814 (888)
351 cd05074 PTKc_Tyro3 Catalytic d 100.0 3E-35 6.5E-40 279.1 23.0 257 9-302 1-272 (273)
352 KOG1151 Tousled-like protein k 100.0 1.7E-37 3.7E-42 291.7 7.4 264 3-295 459-738 (775)
353 cd05572 STKc_cGK_PKG Catalytic 100.0 3.4E-35 7.4E-40 277.1 22.9 240 15-297 1-251 (262)
354 cd07840 STKc_CDK9_like Catalyt 100.0 4.5E-35 9.7E-40 279.6 23.7 253 9-297 1-283 (287)
355 PHA03390 pk1 serine/threonine- 100.0 5.5E-35 1.2E-39 276.9 24.0 240 7-296 14-260 (267)
356 cd05581 STKc_PDK1 Catalytic do 100.0 3.3E-35 7.2E-40 279.5 22.5 247 7-292 1-267 (280)
357 cd07830 STKc_MAK_like Catalyti 100.0 5.5E-35 1.2E-39 278.8 24.0 251 9-297 1-279 (283)
358 KOG4645 MAPKKK (MAP kinase kin 100.0 1.4E-37 3E-42 324.7 6.4 253 5-297 1233-1493(1509)
359 cd06634 STKc_TAO2 Catalytic do 100.0 3.3E-35 7.2E-40 284.2 22.5 246 5-297 13-266 (308)
360 cd05611 STKc_Rim15_like Cataly 100.0 4E-35 8.7E-40 276.3 22.1 243 12-300 1-250 (260)
361 cd07851 STKc_p38 Catalytic dom 100.0 3.4E-35 7.4E-40 288.4 22.4 254 5-297 13-297 (343)
362 cd06614 STKc_PAK Catalytic dom 100.0 4.1E-35 8.9E-40 280.4 22.3 250 6-297 18-269 (286)
363 cd06648 STKc_PAK_II Catalytic 100.0 4.5E-35 9.7E-40 280.1 22.5 246 8-297 20-268 (285)
364 cd08528 STKc_Nek10 Catalytic d 100.0 6.2E-35 1.3E-39 276.4 22.8 249 8-300 1-268 (269)
365 cd05583 STKc_MSK_N N-terminal 100.0 6E-35 1.3E-39 279.5 22.9 251 8-300 1-265 (288)
366 cd05122 PKc_STE Catalytic doma 100.0 9.6E-35 2.1E-39 271.3 23.7 247 8-297 1-250 (253)
367 cd05577 STKc_GRK Catalytic dom 100.0 7.2E-35 1.6E-39 277.4 22.9 238 15-294 1-245 (277)
368 cd07829 STKc_CDK_like Catalyti 100.0 9.3E-35 2E-39 276.8 23.5 252 9-297 1-278 (282)
369 cd08222 STKc_Nek11 Catalytic d 100.0 3.9E-35 8.5E-40 276.4 20.6 245 8-297 1-256 (260)
370 cd08226 PK_STRAD_beta Pseudoki 100.0 6.8E-35 1.5E-39 284.6 22.8 253 12-297 3-307 (328)
371 cd06606 STKc_MAPKKK Catalytic 100.0 2.2E-34 4.8E-39 270.0 25.1 249 8-297 1-256 (260)
372 cd08530 STKc_CNK2-like Catalyt 100.0 7E-35 1.5E-39 273.6 21.5 244 8-297 1-252 (256)
373 cd05610 STKc_MASTL Catalytic d 100.0 1.8E-34 3.9E-39 305.3 26.5 143 7-180 4-152 (669)
374 KOG0695 Serine/threonine prote 100.0 6.3E-36 1.4E-40 272.5 13.0 269 6-320 249-528 (593)
375 cd05613 STKc_MSK1_N N-terminal 100.0 2.7E-34 5.9E-39 275.2 24.9 243 8-291 1-256 (290)
376 cd05579 STKc_MAST_like Catalyt 100.0 8.3E-35 1.8E-39 274.2 20.9 249 15-300 1-256 (265)
377 cd06627 STKc_Cdc7_like Catalyt 100.0 2.8E-34 6.1E-39 269.0 23.9 245 8-297 1-250 (254)
378 cd06657 STKc_PAK4 Catalytic do 100.0 1.5E-34 3.3E-39 277.4 22.4 244 10-297 23-269 (292)
379 KOG0614 cGMP-dependent protein 100.0 4.4E-37 9.5E-42 293.3 4.6 260 7-320 420-689 (732)
380 KOG1025 Epidermal growth facto 100.0 2E-34 4.4E-39 288.5 19.4 255 9-306 698-961 (1177)
381 KOG0608 Warts/lats-like serine 100.0 6.9E-35 1.5E-39 284.5 14.9 276 4-322 626-942 (1034)
382 KOG0603 Ribosomal protein S6 k 100.0 1.1E-34 2.3E-39 285.8 15.9 241 5-297 320-562 (612)
383 KOG0587 Traf2- and Nck-interac 100.0 5.3E-34 1.1E-38 288.3 20.8 249 6-296 18-280 (953)
384 cd08216 PK_STRAD Pseudokinase 100.0 1.2E-33 2.5E-38 274.0 21.9 247 19-297 12-294 (314)
385 cd05123 STKc_AGC Catalytic dom 100.0 3.3E-33 7.2E-38 261.3 23.2 234 15-294 1-240 (250)
386 KOG1035 eIF-2alpha kinase GCN2 100.0 2.7E-34 5.8E-39 298.9 15.7 282 7-297 479-870 (1351)
387 KOG0200 Fibroblast/platelet-de 100.0 3.4E-33 7.3E-38 291.6 23.9 260 5-305 294-582 (609)
388 KOG0664 Nemo-like MAPK-related 100.0 4E-36 8.7E-41 267.0 0.8 211 11-253 57-272 (449)
389 KOG1006 Mitogen-activated prot 100.0 2.9E-35 6.4E-40 260.6 4.6 251 7-297 64-326 (361)
390 PLN03225 Serine/threonine-prot 100.0 6.2E-33 1.3E-37 286.9 21.1 263 5-305 130-455 (566)
391 KOG3653 Transforming growth fa 100.0 2.2E-33 4.8E-38 266.7 16.2 260 8-303 211-504 (534)
392 cd05576 STKc_RPK118_like Catal 100.0 8.7E-33 1.9E-37 257.1 19.1 220 18-293 4-224 (237)
393 KOG0668 Casein kinase II, alph 100.0 1.2E-33 2.7E-38 245.3 9.7 281 6-342 37-329 (338)
394 PLN00113 leucine-rich repeat r 100.0 6.7E-32 1.4E-36 299.5 22.2 251 7-305 690-954 (968)
395 KOG0665 Jun-N-terminal kinase 100.0 1.7E-32 3.7E-37 249.2 11.0 285 5-339 15-314 (369)
396 KOG1024 Receptor-like protein 100.0 2.1E-31 4.5E-36 247.5 16.4 261 4-305 281-558 (563)
397 smart00220 S_TKc Serine/Threon 100.0 4.2E-30 9.1E-35 238.2 21.9 236 19-297 1-240 (244)
398 PLN03224 probable serine/threo 100.0 5.5E-30 1.2E-34 259.0 24.4 208 3-241 141-435 (507)
399 KOG1152 Signal transduction se 100.0 3.1E-31 6.6E-36 257.0 11.3 194 8-241 562-771 (772)
400 KOG1027 Serine/threonine prote 100.0 3.7E-31 8E-36 266.6 9.7 245 12-297 514-766 (903)
401 KOG0984 Mitogen-activated prot 100.0 1.6E-30 3.4E-35 222.8 11.5 209 9-256 48-267 (282)
402 KOG1167 Serine/threonine prote 100.0 8.3E-31 1.8E-35 246.6 9.1 294 5-340 34-386 (418)
403 KOG1345 Serine/threonine kinas 100.0 4.4E-30 9.6E-35 228.4 11.6 248 5-291 22-277 (378)
404 cd00180 PKc Catalytic domain o 100.0 9E-28 2E-32 217.0 22.2 207 15-297 1-213 (215)
405 KOG0576 Mitogen-activated prot 100.0 3E-30 6.4E-35 254.0 5.3 249 6-296 14-269 (829)
406 smart00221 STYKc Protein kinas 100.0 5.3E-27 1.1E-31 215.2 21.0 197 9-241 1-202 (225)
407 smart00750 KIND kinase non-cat 99.9 2.8E-26 6E-31 203.1 17.3 166 113-303 1-170 (176)
408 PLN00181 protein SPA1-RELATED; 99.9 2.3E-26 5E-31 249.1 14.2 187 102-297 53-264 (793)
409 PRK09188 serine/threonine prot 99.9 8E-25 1.7E-29 212.6 15.7 171 3-214 14-195 (365)
410 KOG1166 Mitotic checkpoint ser 99.9 2.6E-24 5.6E-29 226.6 17.8 258 4-306 695-957 (974)
411 COG0515 SPS1 Serine/threonine 99.9 2.9E-22 6.2E-27 193.2 25.1 255 9-297 2-274 (384)
412 cd05147 RIO1_euk RIO kinase fa 99.9 7.9E-23 1.7E-27 182.8 12.7 136 12-182 2-167 (190)
413 PRK10359 lipopolysaccharide co 99.9 3.8E-23 8.3E-28 187.2 10.4 179 2-233 26-216 (232)
414 PF14531 Kinase-like: Kinase-l 99.9 7.3E-23 1.6E-27 190.8 12.4 249 8-289 13-288 (288)
415 KOG0590 Checkpoint kinase and 99.9 2.4E-23 5.3E-28 215.1 7.3 254 10-297 321-584 (601)
416 cd05145 RIO1_like RIO kinase f 99.9 2.6E-21 5.6E-26 173.5 14.7 138 11-183 1-168 (190)
417 KOG0603 Ribosomal protein S6 k 99.9 1.1E-22 2.4E-27 201.2 3.4 244 15-320 2-255 (612)
418 KOG0606 Microtubule-associated 99.9 8.3E-22 1.8E-26 204.1 9.5 216 6-291 82-305 (1205)
419 PRK12274 serine/threonine prot 99.8 1.2E-20 2.5E-25 167.5 12.5 190 10-242 5-210 (218)
420 KOG4158 BRPK/PTEN-induced prot 99.8 3.3E-20 7.1E-25 173.8 15.0 188 101-299 315-511 (598)
421 KOG1240 Protein kinase contain 99.8 8.4E-21 1.8E-25 196.9 7.8 248 8-298 24-291 (1431)
422 smart00090 RIO RIO-like kinase 99.8 2E-19 4.3E-24 166.3 12.7 141 8-182 29-198 (237)
423 KOG0195 Integrin-linked kinase 99.8 6.6E-20 1.4E-24 163.7 7.3 242 9-302 192-446 (448)
424 PRK10345 hypothetical protein; 99.8 6E-18 1.3E-22 152.8 14.9 139 12-179 7-156 (210)
425 PRK14879 serine/threonine prot 99.8 8.1E-18 1.8E-22 153.4 15.0 132 12-181 1-143 (211)
426 TIGR03724 arch_bud32 Kae1-asso 99.7 1.5E-17 3.2E-22 150.3 13.3 127 14-181 1-138 (199)
427 cd05144 RIO2_C RIO kinase fami 99.7 1.6E-17 3.4E-22 150.1 13.1 136 9-184 17-177 (198)
428 PRK09605 bifunctional UGMP fam 99.7 5.4E-17 1.2E-21 168.3 14.7 133 7-181 333-476 (535)
429 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.7E-18 8E-23 166.3 5.4 174 102-292 329-506 (516)
430 KOG1023 Natriuretic peptide re 99.7 4.3E-17 9.3E-22 161.7 12.1 211 88-306 6-228 (484)
431 cd05119 RIO RIO kinase family, 99.7 2.9E-16 6.4E-21 140.3 11.8 158 11-184 1-166 (187)
432 cd05120 APH_ChoK_like Aminogly 99.6 4.4E-15 9.6E-20 127.1 13.1 132 11-180 2-137 (155)
433 PRK01723 3-deoxy-D-manno-octul 99.6 8.5E-15 1.8E-19 135.7 15.3 133 13-181 37-191 (239)
434 KOG0590 Checkpoint kinase and 99.5 4.2E-16 9.1E-21 161.5 -2.3 252 6-295 19-283 (601)
435 cd05146 RIO3_euk RIO kinase fa 99.5 3.7E-13 8.1E-18 119.5 13.2 138 12-184 2-176 (197)
436 TIGR01982 UbiB 2-polyprenylphe 99.5 2.4E-13 5.2E-18 136.7 12.6 160 13-183 123-308 (437)
437 PRK04750 ubiB putative ubiquin 99.4 3.9E-12 8.5E-17 129.6 18.4 165 8-183 121-315 (537)
438 cd05151 ChoK Choline Kinase (C 99.4 9.9E-13 2.2E-17 115.4 12.0 126 12-180 3-135 (170)
439 KOG0601 Cyclin-dependent kinas 99.4 2E-13 4.3E-18 135.8 7.3 254 3-297 110-378 (524)
440 COG3642 Mn2+-dependent serine/ 99.3 1.4E-11 3E-16 105.9 10.3 128 13-181 2-140 (204)
441 KOG3087 Serine/threonine prote 99.3 3.8E-11 8.3E-16 102.7 12.1 143 11-182 11-166 (229)
442 KOG0606 Microtubule-associated 99.2 8.7E-12 1.9E-16 130.6 3.5 279 5-321 802-1105(1205)
443 cd05154 ACAD10_11_like Acyl-Co 99.1 9.8E-10 2.1E-14 100.6 12.7 139 13-180 4-205 (223)
444 PRK15123 lipopolysaccharide co 99.1 3.9E-09 8.5E-14 99.0 16.6 132 22-180 37-193 (268)
445 KOG1243 Protein kinase [Genera 99.1 4.9E-09 1.1E-13 105.9 17.7 181 9-235 15-199 (690)
446 KOG0601 Cyclin-dependent kinas 99.1 7.9E-11 1.7E-15 117.5 4.9 241 5-295 263-511 (524)
447 PF01163 RIO1: RIO1 family; I 99.0 2.4E-09 5.3E-14 94.8 10.3 126 22-183 1-157 (188)
448 COG4248 Uncharacterized protei 99.0 1.9E-08 4.2E-13 96.4 15.1 262 7-303 11-301 (637)
449 KOG1266 Protein kinase [Signal 98.9 1.2E-09 2.7E-14 101.1 6.5 177 102-295 145-328 (458)
450 PF06293 Kdo: Lipopolysacchari 98.8 9E-08 2E-12 86.8 13.9 110 46-181 55-170 (206)
451 COG2112 Predicted Ser/Thr prot 98.8 4.5E-08 9.8E-13 83.8 10.6 127 10-180 25-154 (201)
452 PF06176 WaaY: Lipopolysacchar 98.8 6.6E-08 1.4E-12 86.6 11.4 145 2-180 26-182 (229)
453 KOG2137 Protein kinase [Signal 98.8 2.8E-09 6E-14 108.1 2.3 154 137-297 107-264 (700)
454 PRK09902 hypothetical protein; 98.7 4.2E-07 9E-12 81.2 14.9 137 16-180 27-178 (216)
455 COG0478 RIO-like serine/threon 98.7 2E-07 4.4E-12 85.2 11.9 133 9-180 93-250 (304)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 2.2E-06 4.8E-11 78.7 13.8 72 13-113 7-78 (226)
457 COG1718 RIO1 Serine/threonine 98.5 1.8E-06 3.8E-11 78.3 12.1 77 102-184 139-218 (268)
458 COG0661 AarF Predicted unusual 98.5 5.1E-07 1.1E-11 91.8 9.6 162 13-183 131-316 (517)
459 KOG3741 Poly(A) ribonuclease s 98.5 2.2E-05 4.7E-10 77.8 19.7 166 21-236 290-473 (655)
460 PF01636 APH: Phosphotransfera 98.3 8.4E-06 1.8E-10 74.9 12.4 79 12-117 2-84 (239)
461 KOG1235 Predicted unusual prot 98.3 7.1E-06 1.5E-10 83.4 12.1 89 91-183 266-356 (538)
462 cd05150 APH Aminoglycoside 3'- 98.3 1.5E-05 3.3E-10 74.2 13.1 75 13-116 4-80 (244)
463 PF10707 YrbL-PhoP_reg: PhoP r 98.2 6.7E-05 1.4E-09 67.1 14.1 133 12-175 6-165 (199)
464 cd05155 APH_ChoK_like_1 Unchar 98.1 2.9E-05 6.3E-10 71.9 11.0 45 12-61 2-47 (235)
465 PF13095 FTA2: Kinetochore Sim 98.0 0.00015 3.4E-09 64.4 12.8 145 7-179 37-206 (207)
466 KOG0576 Mitogen-activated prot 98.0 1.7E-06 3.6E-11 87.5 0.4 185 9-239 244-430 (829)
467 PLN02876 acyl-CoA dehydrogenas 97.8 0.00034 7.4E-09 76.7 14.8 78 11-113 42-128 (822)
468 KOG2270 Serine/threonine prote 97.7 0.00032 6.9E-09 67.3 11.1 140 11-184 148-316 (520)
469 PRK09550 mtnK methylthioribose 97.7 0.00057 1.2E-08 67.8 12.2 75 12-112 31-114 (401)
470 TIGR02721 ycfN_thiK thiamine k 97.5 0.00063 1.4E-08 63.8 10.3 48 14-63 3-52 (256)
471 PRK05231 homoserine kinase; Pr 97.5 0.0025 5.5E-08 61.7 14.8 48 12-62 27-74 (319)
472 cd05157 ETNK_euk Ethanolamine 97.5 0.0018 3.8E-08 59.8 12.9 52 12-63 3-56 (235)
473 TIGR00938 thrB_alt homoserine 97.3 0.0034 7.4E-08 60.6 13.0 51 10-62 25-75 (307)
474 TIGR01767 MTRK 5-methylthiorib 97.3 0.0036 7.8E-08 60.9 12.6 72 14-111 2-82 (370)
475 cd05153 HomoserineK_II Homoser 97.3 0.0036 7.7E-08 60.0 12.5 50 11-63 18-67 (296)
476 PF12260 PIP49_C: Protein-kina 97.2 0.0014 3E-08 58.3 7.7 83 90-181 21-111 (188)
477 KOG1035 eIF-2alpha kinase GCN2 97.1 0.0023 5E-08 69.7 9.9 200 49-297 229-433 (1351)
478 cd05156 ChoK_euk Choline Kinas 97.1 0.0083 1.8E-07 57.7 12.8 52 12-63 3-61 (302)
479 KOG2268 Serine/threonine prote 97.1 0.00046 9.9E-09 65.1 3.7 133 8-180 93-250 (465)
480 PRK10593 hypothetical protein; 97.0 0.0083 1.8E-07 57.5 12.0 110 7-148 14-127 (297)
481 cd05152 MPH2' Macrolide 2'-Pho 97.0 0.0042 9.1E-08 58.9 9.3 49 12-61 13-64 (276)
482 PRK12396 5-methylribose kinase 96.8 0.016 3.4E-07 57.3 11.4 74 12-111 34-115 (409)
483 PLN02756 S-methyl-5-thioribose 96.6 0.05 1.1E-06 54.0 14.1 75 11-113 36-119 (418)
484 PLN02236 choline kinase 96.6 0.048 1E-06 53.5 13.6 55 9-63 38-97 (344)
485 COG5072 ALK1 Serine/threonine 96.5 0.0099 2.1E-07 57.2 8.0 74 99-181 296-370 (488)
486 PLN02421 phosphotransferase, a 96.5 0.039 8.4E-07 53.8 12.0 52 12-63 19-74 (330)
487 PF03881 Fructosamin_kin: Fruc 96.4 0.038 8.3E-07 52.6 11.4 76 9-111 19-94 (288)
488 KOG1826 Ras GTPase activating 96.2 0.00049 1.1E-08 76.4 -2.7 131 100-240 1302-1441(2724)
489 KOG1093 Predicted protein kina 96.1 0.026 5.6E-07 56.8 8.5 79 218-296 110-192 (725)
490 COG3173 Predicted aminoglycosi 95.7 0.14 3.1E-06 49.2 11.4 29 150-181 200-228 (321)
491 KOG1236 Predicted unusual prot 95.3 0.041 8.9E-07 53.9 6.4 60 102-163 318-379 (565)
492 PRK11768 serine/threonine prot 95.3 0.37 7.9E-06 46.9 13.2 43 19-62 37-80 (325)
493 PTZ00384 choline kinase; Provi 94.8 0.79 1.7E-05 45.6 14.2 28 148-179 227-254 (383)
494 PRK06148 hypothetical protein; 94.5 1 2.2E-05 50.8 15.5 47 13-61 31-77 (1013)
495 TIGR02906 spore_CotS spore coa 93.6 0.13 2.8E-06 49.5 5.8 28 148-179 187-214 (313)
496 PRK06149 hypothetical protein; 93.6 0.91 2E-05 51.0 13.0 47 13-62 37-83 (972)
497 COG3001 Uncharacterized protei 93.4 0.75 1.6E-05 41.9 9.6 73 12-111 21-93 (286)
498 PF04655 APH_6_hur: Aminoglyco 93.4 0.47 1E-05 44.2 8.7 52 12-67 7-61 (253)
499 COG3231 Aph Aminoglycoside pho 93.0 1.6 3.4E-05 39.6 10.9 76 14-116 25-102 (266)
500 PTZ00296 choline kinase; Provi 92.9 2.1 4.6E-05 43.4 13.3 53 11-63 109-170 (442)
No 1
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-60 Score=410.66 Aligned_cols=298 Identities=68% Similarity=1.180 Sum_probs=288.6
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
-|++++|+++++||+|+||.+|+|....+|+.||||++.+...++++..|.++++.|++..
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~------------------- 71 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGV------------------- 71 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCC-------------------
Confidence 4788999999999999999999999999999999999999999999999999999999886
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
++|.+++|+.+..+.++|||++|.+|.+++..|.+.|+.++++.++.||+..++|+|.+++|||||||+|+|+
T Consensus 72 -------GiP~i~~y~~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLM 144 (341)
T KOG1163|consen 72 -------GIPHIRHYGTEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLM 144 (341)
T ss_pred -------CCchhhhhccccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceee
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+.+.-...+.|+|||+|+.+.+..+..|+||++...++||++|++...+.+.+.++++|+.|+|++|.++..|.+||++.
T Consensus 145 Glgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 145 GLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred ccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 99888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCCCccccccccccc
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQ 322 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~dw~~l~~~ 322 (449)
.+....+++.+|.+.+++.+++.+|+++|.+|.-++.+|..+.+++.|+|..|.+.|+-++...+...|..|||.+++.+
T Consensus 225 ka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lkqk 304 (341)
T KOG1163|consen 225 KAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQK 304 (341)
T ss_pred chhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998854
Q ss_pred cccc
Q 013125 323 QTQK 326 (449)
Q Consensus 323 ~~~~ 326 (449)
..+.
T Consensus 305 ~~q~ 308 (341)
T KOG1163|consen 305 SQQS 308 (341)
T ss_pred hhcc
Confidence 4443
No 2
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-57 Score=411.46 Aligned_cols=291 Identities=58% Similarity=1.011 Sum_probs=281.7
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
|+|-.|+++++||+|+||++++|+..-+++.||||.+....+.+++.-|.+.++.|.+..
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~-------------------- 84 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTE-------------------- 84 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCC--------------------
Confidence 788999999999999999999999999999999999988888999999999999998776
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
+||.+++||.++.+..||+|++|.+|.|++..|+++|+.++++.+|.||+.-++|+|++.+|+|||||+|+||+
T Consensus 85 ------GIP~vYYFGqeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIG 158 (449)
T KOG1165|consen 85 ------GIPQVYYFGQEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIG 158 (449)
T ss_pred ------CCCceeeeccccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cC--CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 164 LG--RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 164 ~~--~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
.. .+...|.++|||+|+.++++.+..|+||++.+++.||++||+...++|.+.++++|+.|||.++++++.|.+||+|
T Consensus 159 rp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 159 RPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred CCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 63 3456899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCCCccccccccc
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILK 320 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~dw~~l~ 320 (449)
+++...++++.+|.+.+-..+++++|.++|.+|..++.+...+++++-|+|+.+..+|.+++...++.+|..|||..+.
T Consensus 239 LKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln 317 (449)
T KOG1165|consen 239 LKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLN 317 (449)
T ss_pred ccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998766
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.7e-50 Score=372.07 Aligned_cols=255 Identities=25% Similarity=0.342 Sum_probs=214.1
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC---------CchhHHHHHHHHHHHcCCCcceeeEeecch
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---------KHPQLLYEAKVYKILQGGSKIRLVVFHVDH 74 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 74 (449)
-+.+.|.+.+.||+|+||.|-+|....|++.||||+++++. +.....+|+++|++|+|+++++.
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~------- 241 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRI------- 241 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEE-------
Confidence 46788999999999999999999999999999999987652 12235799999999999976654
Q ss_pred hhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 013125 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHR 153 (449)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHr 153 (449)
+.+....+..||||||+ ||.|.+.+.. .+.+.+..-+.+++||+.||.|||+.||+||
T Consensus 242 --------------------~d~f~~~ds~YmVlE~v~GGeLfd~vv~-nk~l~ed~~K~~f~Qll~avkYLH~~GI~HR 300 (475)
T KOG0615|consen 242 --------------------KDFFEVPDSSYMVLEYVEGGELFDKVVA-NKYLREDLGKLLFKQLLTAVKYLHSQGIIHR 300 (475)
T ss_pred --------------------eeeeecCCceEEEEEEecCccHHHHHHh-ccccccchhHHHHHHHHHHHHHHHHcCcccc
Confidence 44556778889999999 9999998875 5678888899999999999999999999999
Q ss_pred CCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC---CCccchHHHHHHHHH
Q 013125 154 DIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE---QSRRDDLESLGYVLL 230 (449)
Q Consensus 154 DLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~~DvwSlG~il~ 230 (449)
||||+|||+..++++..+||+|||+|+......- .+++|||+.|.|||++.+.. +..++|+||+||+||
T Consensus 301 DiKPeNILl~~~~e~~llKItDFGlAK~~g~~sf--------m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLf 372 (475)
T KOG0615|consen 301 DIKPENILLSNDAEDCLLKITDFGLAKVSGEGSF--------MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLF 372 (475)
T ss_pred cCCcceEEeccCCcceEEEecccchhhcccccee--------hhhhcCCccccChhheecCCeecccchheeeeccceEE
Confidence 9999999998766789999999999998764332 36899999999999998765 345889999999999
Q ss_pred HHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 231 YFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 231 el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
-+++|.+||.+..... .....|..+++..- +..|...+++..+|+..+|..||++||+..+..+
T Consensus 373 vcLsG~pPFS~~~~~~--sl~eQI~~G~y~f~-p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 373 VCLSGYPPFSEEYTDP--SLKEQILKGRYAFG-PLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred EEeccCCCcccccCCc--cHHHHHhcCccccc-ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 9999999998755432 23444556665544 4567788899999999999999999999876644
No 4
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-49 Score=366.33 Aligned_cols=260 Identities=25% Similarity=0.344 Sum_probs=216.3
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
+-.+.|++++.||+|+||+||.++.++|++.+|+|++++.. .......|..||..++|+.
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPF--------------- 86 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPF--------------- 86 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCc---------------
Confidence 33578999999999999999999999999999999987652 2334778888888887774
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
++.+.+.+.+.+..|||+||+ ||.|...++. .+.|++..++.++.+|+.||.|||++|||||||||
T Consensus 87 ------------iv~l~ysFQt~~kLylVld~~~GGeLf~hL~~-eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKP 153 (357)
T KOG0598|consen 87 ------------IVKLIYSFQTEEKLYLVLDYLNGGELFYHLQR-EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKP 153 (357)
T ss_pred ------------EeeeEEecccCCeEEEEEeccCCccHHHHHHh-cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCH
Confidence 555666778889999999999 8899998886 67899999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+|||+ +..|+|+|+|||+|+........ ..+++||+.|||||++.+..|+..+|+||||+++|||++|.+
T Consensus 154 ENILL---d~~GHi~LtDFgL~k~~~~~~~~-------t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~p 223 (357)
T KOG0598|consen 154 ENILL---DEQGHIKLTDFGLCKEDLKDGDA-------TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKP 223 (357)
T ss_pred HHeee---cCCCcEEEeccccchhcccCCCc-------cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCC
Confidence 99999 59999999999999865544332 357899999999999999999999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHHHhcCCCCCcc
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD----YGFLKRLFHDLFSREGYDFDFV 313 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~l~~~l~~~~~~~~~~~~~~ 313 (449)
||.+.+. ...+.+|...+...+.. .++.+.++++...+..+|++|.. +.+| ....+-..
T Consensus 224 PF~~~~~---~~~~~~I~~~k~~~~p~----~ls~~ardll~~LL~rdp~~RLg~~~d~~~i----------k~HpfF~~ 286 (357)
T KOG0598|consen 224 PFYAEDV---KKMYDKILKGKLPLPPG----YLSEEARDLLKKLLKRDPRQRLGGPGDAEEI----------KRHPFFKG 286 (357)
T ss_pred CCcCccH---HHHHHHHhcCcCCCCCc----cCCHHHHHHHHHHhccCHHHhcCCCCChHHh----------hcCccccc
Confidence 9988543 35666666666443322 24689999999999999999963 3333 23455556
Q ss_pred ccccc
Q 013125 314 FDWTI 318 (449)
Q Consensus 314 ~dw~~ 318 (449)
.||+.
T Consensus 287 inW~~ 291 (357)
T KOG0598|consen 287 INWEK 291 (357)
T ss_pred CCHHH
Confidence 77754
No 5
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-48 Score=375.42 Aligned_cols=265 Identities=26% Similarity=0.374 Sum_probs=222.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
.+|++++.||+|+|++|++|+++.+++.+||||+.+. .+.+...+|..+|..|.+..
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hP------------------ 134 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHP------------------ 134 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCC------------------
Confidence 5799999999999999999999999999999997653 44556788889999985332
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
++.++++-+.++..+|+|+||+ +|+|.++++. -+.|++..++.++.||+.||+|||++|||||||||+||
T Consensus 135 --------givkLy~TFQD~~sLYFvLe~A~nGdll~~i~K-~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENI 205 (604)
T KOG0592|consen 135 --------GIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKK-YGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENI 205 (604)
T ss_pred --------CeEEEEEEeecccceEEEEEecCCCcHHHHHHH-hCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhhe
Confidence 5666666677888999999999 9999999987 46799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCcccc----ccC--CCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP----YRE--NKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~----~~~--~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~ 234 (449)
|+ +++++++|+|||.|+.+........-| +.. ..+++||+.|.+||++.+...+..+|||+||||||+|+.
T Consensus 206 LL---d~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmla 282 (604)
T KOG0592|consen 206 LL---DKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLA 282 (604)
T ss_pred eE---cCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhc
Confidence 99 699999999999999876543321111 111 257999999999999999999999999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCCCccc
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVF 314 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~ 314 (449)
|.+||.+.+.. -.+++|+...+.+| +++|+.+.+|+.++|..||.+|++.++|.+ +.|....
T Consensus 283 G~PPFra~Ney---liFqkI~~l~y~fp-----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~----------HpFF~~V 344 (604)
T KOG0592|consen 283 GQPPFRAANEY---LIFQKIQALDYEFP-----EGFPEDARDLIKKLLVRDPSDRLTSQQIKA----------HPFFEGV 344 (604)
T ss_pred CCCCCccccHH---HHHHHHHHhcccCC-----CCCCHHHHHHHHHHHccCccccccHHHHhh----------CcccccC
Confidence 99999987654 45566666677666 667899999999999999999999987755 3444556
Q ss_pred ccccc
Q 013125 315 DWTIL 319 (449)
Q Consensus 315 dw~~l 319 (449)
||+.+
T Consensus 345 dw~nl 349 (604)
T KOG0592|consen 345 DWENL 349 (604)
T ss_pred Chhhh
Confidence 77653
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-47 Score=357.33 Aligned_cols=247 Identities=23% Similarity=0.325 Sum_probs=201.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|.+.++||+|+||+||+|++.+++..||||.+.... ..+.+..|+++|+.++|+|++.++.
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d------------- 76 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLD------------- 76 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEE-------------
Confidence 78999999999999999999999999999999876553 2334789999999999998776654
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
+....++.||||||| ||+|.+++.. .+.+++.+++.++.||+.||++||+++||||||||+|||
T Consensus 77 --------------~~~~~~~i~lVMEyC~gGDLs~yi~~-~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiL 141 (429)
T KOG0595|consen 77 --------------CIEDDDFIYLVMEYCNGGDLSDYIRR-RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNIL 141 (429)
T ss_pred --------------EEecCCeEEEEEEeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEE
Confidence 346678999999999 8999999986 457999999999999999999999999999999999999
Q ss_pred eecCCCC---CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 162 MGLGRKA---NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 162 l~~~~~~---~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
++..... -.+||+|||+|+.+..... ..+++|++.|||||++....|+.|+|+||+|+++|+|++|+.|
T Consensus 142 Ls~~~~~~~~~~LKIADFGfAR~L~~~~~--------a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~P 213 (429)
T KOG0595|consen 142 LSTTARNDTSPVLKIADFGFARFLQPGSM--------AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPP 213 (429)
T ss_pred eccCCCCCCCceEEecccchhhhCCchhH--------HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCC
Confidence 9754222 6799999999998774432 4589999999999999999999999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 294 (449)
|......+ .+..+.......+... ........+++...+..++.+|-++..
T Consensus 214 f~a~t~~e---L~~~~~k~~~~~~~~~--~~~s~~~~~Ll~~ll~~~~~~~~~~~~ 264 (429)
T KOG0595|consen 214 FDAETPKE---LLLYIKKGNEIVPVLP--AELSNPLRELLISLLQRNPKDRISFED 264 (429)
T ss_pred ccccCHHH---HHHHHhccccccCchh--hhccCchhhhhhHHHhcCccccCchHH
Confidence 98765443 3333322222222211 222345668888888888888877654
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-48 Score=361.86 Aligned_cols=254 Identities=23% Similarity=0.333 Sum_probs=212.0
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
..+.+.++.||+|+.|+||+|+++.|++.+|+|++.... ...++.+|+++++..++++++.+++
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~yg------------- 144 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYG------------- 144 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeE-------------
Confidence 347788899999999999999999999999999984432 2446899999999998887665544
Q ss_pred hhcccCCCcCeeEEecccCC-eeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCc
Q 013125 83 IFSSTLGGIPNIKWYGVDGE-DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDN 159 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~N 159 (449)
++.... ..+|+|||| ||+|.++++. .+++++..+-.++.+++.||.|||+ ++||||||||+|
T Consensus 145 --------------aF~~~~~~isI~mEYMDgGSLd~~~k~-~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsN 209 (364)
T KOG0581|consen 145 --------------AFYSNGEEISICMEYMDGGSLDDILKR-VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSN 209 (364)
T ss_pred --------------EEEeCCceEEeehhhcCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHH
Confidence 334444 589999999 9999999886 4679999999999999999999996 899999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
||+ +..+.|||+|||.|....+.. .++++||..|||||.+.+..|+.++||||||++++||++|+.||
T Consensus 210 lLv---NskGeVKicDFGVS~~lvnS~---------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~ 277 (364)
T KOG0581|consen 210 LLV---NSKGEVKICDFGVSGILVNSI---------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPY 277 (364)
T ss_pred eee---ccCCCEEeccccccHHhhhhh---------cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCC
Confidence 999 589999999999998776652 36899999999999999999999999999999999999999999
Q ss_pred CCCh--hhcHHHHHHHHHHhhcCCCHHHhhcc-ChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 240 QGLK--AATKKQKYDKICEKKVSTPIEVLCKS-HPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 240 ~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
.... .....+.+..|+.. +++.+..+ ++++|++++..||+.||.+||++++|.+ +.+++.
T Consensus 278 ~~~~~~~~~~~~Ll~~Iv~~----ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~--Hpfi~~ 340 (364)
T KOG0581|consen 278 PPPNPPYLDIFELLCAIVDE----PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ--HPFIKK 340 (364)
T ss_pred CCcCCCCCCHHHHHHHHhcC----CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc--CHHHhh
Confidence 8741 23345556555543 33444444 7999999999999999999999998855 444443
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-47 Score=374.30 Aligned_cols=251 Identities=28% Similarity=0.405 Sum_probs=220.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
.+|+.++.||+|||+.||.+++..+|+.||+|++.+. ...+.+.+|++|.+.|+|++++.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~--------------- 82 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQ--------------- 82 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEe---------------
Confidence 5799999999999999999999999999999997652 33456899999999999997554
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
++.|+++.+++|||+|+| .++|..+++ ..+.+++.+++.+++||+.||.|||+.+|||||||..|+
T Consensus 83 ------------f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNl 149 (592)
T KOG0575|consen 83 ------------FYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNL 149 (592)
T ss_pred ------------eeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhhe
Confidence 555678889999999999 889988888 478899999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
++ +++.+|||+|||||.....+... ..++|||+.|.|||++.+...+..+||||+|||||-|++|++||+
T Consensus 150 fL---~~~~~VKIgDFGLAt~le~~~Er-------k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFe 219 (592)
T KOG0575|consen 150 FL---NENMNVKIGDFGLATQLEYDGER-------KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFE 219 (592)
T ss_pred ee---cCcCcEEecccceeeeecCcccc-------cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcc
Confidence 99 58889999999999988755432 358999999999999999999999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
.. ...+.+.+|....+..|. .++.+.++||..+|+.+|.+||+.++|.. .++|+.
T Consensus 220 tk---~vkety~~Ik~~~Y~~P~-----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~--h~Ff~~ 274 (592)
T KOG0575|consen 220 TK---TVKETYNKIKLNEYSMPS-----HLSAEAKDLIRKLLRPNPSERPSLDEVLD--HPFFKS 274 (592)
T ss_pred cc---hHHHHHHHHHhcCccccc-----ccCHHHHHHHHHHhcCCcccCCCHHHHhc--CHhhhC
Confidence 64 345677888777777775 44789999999999999999999988844 566643
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.9e-48 Score=347.42 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=212.3
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchh----HHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ----LLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~----~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|+.+.++|+|+||.||+|+++.||+.||||.+....+++. .++|+++|+.|+|+|++.++.++
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF----------- 70 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF----------- 70 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----------
Confidence 579999999999999999999999999999999877655443 68999999999999988765432
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
......+||+|||..++.+.+......++.+.++.+++|++.|+.|+|++++|||||||+|||+
T Consensus 71 ----------------rrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi 134 (396)
T KOG0593|consen 71 ----------------RRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI 134 (396)
T ss_pred ----------------HhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE
Confidence 3457789999999999888888777789999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ .++.+||+|||+|+....+... ...++.|.+|+|||.+.| -.|+..+||||+||++.||++|.+.|.|
T Consensus 135 t---~~gvvKLCDFGFAR~L~~pgd~-------YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG 204 (396)
T KOG0593|consen 135 T---QNGVVKLCDFGFARTLSAPGDN-------YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPG 204 (396)
T ss_pred e---cCCcEEeccchhhHhhcCCcch-------hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCC
Confidence 6 8899999999999988764431 346788999999999988 6799999999999999999999999999
Q ss_pred ChhhcHHHHHHHHHHhhcCCC-----------------------HHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTP-----------------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.++.+....+.+.++...+.- .+.-..+...-+.+++..|+..||++|++.+++..
T Consensus 205 ~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 205 RSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 887766655555443322111 12222333456889999999999999999888743
No 10
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-46 Score=357.33 Aligned_cols=263 Identities=26% Similarity=0.351 Sum_probs=220.1
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchh----HHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ----LLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~----~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
.+.|+.+++||+|.||.||+|++..+|+.||+|.+..+...+. ..+|+.||+.|.|+|++.+.+...+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~-------- 187 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTS-------- 187 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEe--------
Confidence 4578999999999999999999999999999998776554333 5799999999999999887665432
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
.....+|||+|||..+|.-++...+-+|+..+++.|+.||+.||+|||++||+|||||.+|||
T Consensus 188 -----------------~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiL 250 (560)
T KOG0600|consen 188 -----------------KLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNIL 250 (560)
T ss_pred -----------------cCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceE
Confidence 134688999999999999998876678999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
| |..+.+||+|||||+.+....... ....+.|.+|++||+++|.. |+..+|+||.||||.||+.|++.|+
T Consensus 251 i---dn~G~LKiaDFGLAr~y~~~~~~~------~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~ 321 (560)
T KOG0600|consen 251 I---DNNGVLKIADFGLARFYTPSGSAP------YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQ 321 (560)
T ss_pred E---cCCCCEEeccccceeeccCCCCcc------cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcC
Confidence 9 689999999999999887655322 35678899999999999875 9999999999999999999999999
Q ss_pred CChhhcHHHHHHHHHHhhcCC-------C--------------HHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 241 GLKAATKKQKYDKICEKKVST-------P--------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~-------~--------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
|....+..+.+.++|+..... | +.+..+.++....+|+..+|.+||++|.++.+.++
T Consensus 322 G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~-- 399 (560)
T KOG0600|consen 322 GRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ-- 399 (560)
T ss_pred CccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc--
Confidence 988887777777765421110 0 23345667888889999999999999999876533
Q ss_pred HHHHH
Q 013125 300 HDLFS 304 (449)
Q Consensus 300 ~~~~~ 304 (449)
.++|.
T Consensus 400 seyF~ 404 (560)
T KOG0600|consen 400 SEYFT 404 (560)
T ss_pred Ccccc
Confidence 45553
No 11
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-47 Score=366.26 Aligned_cols=255 Identities=25% Similarity=0.392 Sum_probs=215.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc-hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~-~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
..++++++||+|.||+||+|++.. ...||+|.++..... +.+.+|+++|+.|+|++++++++++
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~-------------- 270 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVC-------------- 270 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEE--------------
Confidence 345678999999999999999953 347999998876443 5688999999999999988888775
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVY-CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~-~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
..++..||||||+ .|+|.++++. .+..+...+.+.++.||++||+||+++++|||||.+.||||+
T Consensus 271 -------------~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~ 337 (468)
T KOG0197|consen 271 -------------TKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD 337 (468)
T ss_pred -------------ecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec
Confidence 3445789999999 9999999986 466799999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~ 242 (449)
++..|||+|||||+...+.. |.......-+..|+|||++....++.++||||||++||||+| |+.||.++
T Consensus 338 ---~~~~vKIsDFGLAr~~~d~~------Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m 408 (468)
T KOG0197|consen 338 ---EDLVVKISDFGLARLIGDDE------YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM 408 (468)
T ss_pred ---cCceEEEcccccccccCCCc------eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC
Confidence 88999999999999544333 222334455788999999999999999999999999999999 99999998
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
...+..+.+ +.....|.+..| |+++.++|..||..+|++||+|+.+...|++++..
T Consensus 409 sn~ev~~~l----e~GyRlp~P~~C---P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 409 SNEEVLELL----ERGYRLPRPEGC---PDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CHHHHHHHH----hccCcCCCCCCC---CHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 876544443 456666666544 99999999999999999999999999888887654
No 12
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-47 Score=361.63 Aligned_cols=257 Identities=25% Similarity=0.340 Sum_probs=213.0
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chh--HHHHHHHHHHHc-CCCcceeeEeecchhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQ--LLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~--~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~ 79 (449)
++-+||.++++||.|.||.||+|+.+.+++.||||.++..-. +++ -++|++.|++|+ |++++.+..+..
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~------- 79 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIR------- 79 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhh-------
Confidence 456899999999999999999999999999999998776522 333 478999999999 998877654332
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
......++|||||..+|.++++..++.|++..++.|++||+.||+|+|.+|+.||||||+|
T Consensus 80 -------------------d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPEN 140 (538)
T KOG0661|consen 80 -------------------DNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPEN 140 (538)
T ss_pred -------------------ccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhh
Confidence 2334899999999999999999888889999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~p 238 (449)
||+. ....|||+|||+|+...... || ..++.|.+|+|||+++.. -|+.++|||++|||++|+.+-++.
T Consensus 141 iLi~---~~~~iKiaDFGLARev~Skp-----PY---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPL 209 (538)
T KOG0661|consen 141 ILIS---GNDVIKIADFGLAREVRSKP-----PY---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPL 209 (538)
T ss_pred eEec---ccceeEecccccccccccCC-----Cc---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhccc
Confidence 9994 48899999999999776543 22 467889999999987754 589999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhc----------------------CCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKV----------------------STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
|.|.+..+...++..+++... ..++..+..+++.+..++|..|+.+||.+||++.+..
T Consensus 210 FPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al 289 (538)
T KOG0661|consen 210 FPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQAL 289 (538)
T ss_pred CCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHh
Confidence 999877655444444332111 1123344555788999999999999999999998875
Q ss_pred H
Q 013125 297 R 297 (449)
Q Consensus 297 ~ 297 (449)
+
T Consensus 290 ~ 290 (538)
T KOG0661|consen 290 Q 290 (538)
T ss_pred c
Confidence 5
No 13
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=357.27 Aligned_cols=256 Identities=25% Similarity=0.369 Sum_probs=211.6
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCce-EEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEI-VAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~-vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
.....+.+.||+|+||+||+|.+. |.. ||+|++..... ...+.+|+.+|..|+|+|++.+++.+.
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~-------- 109 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACT-------- 109 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEc--------
Confidence 345567788999999999999984 455 99999876432 236899999999999999888777653
Q ss_pred hhhhcccCCCcCeeEEecccCC-eeEEEEecC-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCC
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGE-DNVLVLDLL-GPSLEDLFVY-CRRKFSLKTVLMLADQMIARIEYVHSRG-FLHRDIK 156 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~-g~sL~~~~~~-~~~~~~~~~~~~i~~qil~~L~~LH~~g-iiHrDLk 156 (449)
+.. ..+|||||+ +|+|.+++.. ..+.+++..++.++.||+.||+|||+++ |||||||
T Consensus 110 -------------------~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK 170 (362)
T KOG0192|consen 110 -------------------SPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLK 170 (362)
T ss_pred -------------------CCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccC
Confidence 223 689999999 9999999987 3778999999999999999999999999 9999999
Q ss_pred CCcEEeecCCCCC-eEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc--CCCCCccchHHHHHHHHHHHH
Q 013125 157 PDNFLMGLGRKAN-QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL--GIEQSRRDDLESLGYVLLYFL 233 (449)
Q Consensus 157 p~Nill~~~~~~~-~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~~~DvwSlG~il~el~ 233 (449)
|+|||+. ... ++||+|||+++....... ......||..|||||++. +..|+.++||||||+++|||+
T Consensus 171 ~~NiLv~---~~~~~~KI~DFGlsr~~~~~~~-------~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~ 240 (362)
T KOG0192|consen 171 SDNILVD---LKGKTLKIADFGLSREKVISKT-------SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELL 240 (362)
T ss_pred hhhEEEc---CCCCEEEECCCccceeeccccc-------cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHH
Confidence 9999994 665 999999999987664321 123478999999999999 568999999999999999999
Q ss_pred hCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhc
Q 013125 234 RGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 306 (449)
Q Consensus 234 ~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 306 (449)
||+.||.+.... +....++......+++. .+|+.+..+|..||..||..||+|.+|...|+.+....
T Consensus 241 t~~~Pf~~~~~~---~~~~~v~~~~~Rp~~p~---~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 241 TGEIPFEDLAPV---QVASAVVVGGLRPPIPK---ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred HCCCCCCCCCHH---HHHHHHHhcCCCCCCCc---cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 999999987763 33333443444433333 35899999999999999999999999999998876643
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-47 Score=340.95 Aligned_cols=245 Identities=25% Similarity=0.320 Sum_probs=204.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
..|+|+++||.|+||+||+|.+..++..||.|.++-+. .......|+.+|+.|+|+|++..+...
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~----------- 87 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHS----------- 87 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHh-----------
Confidence 45999999999999999999999999999999766332 123478899999999999988764311
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh--CC--ccccC
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHS--RG--FLHRD 154 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~--~g--iiHrD 154 (449)
+..+..-.+||||+| +|+|..+++.. ++.|+++++++++.|++.||..+|+ .. |+|||
T Consensus 88 --------------f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRD 153 (375)
T KOG0591|consen 88 --------------FIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRD 153 (375)
T ss_pred --------------hhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeecc
Confidence 112334478999999 99999888733 5679999999999999999999999 55 99999
Q ss_pred CCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh
Q 013125 155 IKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 155 Lkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~ 234 (449)
|||.||+++ .+|.|||+|||+++.+....+.. .+++|||.||+||.+.+.+|+.++||||+||++|||+.
T Consensus 154 IKPaNIFl~---~~gvvKLGDfGL~r~l~s~~tfA-------~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMca 223 (375)
T KOG0591|consen 154 IKPANIFLT---ANGVVKLGDFGLGRFLSSKTTFA-------HSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCA 223 (375)
T ss_pred CcchheEEc---CCCceeeccchhHhHhcchhHHH-------HhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHh
Confidence 999999994 89999999999999888766543 48899999999999999999999999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
-++||.|. ...+.-.+|.++.++..+.. -++.++..|+..|+..|++.||+.
T Consensus 224 L~~PF~g~---n~~~L~~KI~qgd~~~~p~~---~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 224 LQSPFYGD---NLLSLCKKIEQGDYPPLPDE---HYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred cCCCcccc---cHHHHHHHHHcCCCCCCcHH---HhhhHHHHHHHHHccCCcccCCCc
Confidence 99999985 33445556666655433322 336889999999999999999983
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.9e-46 Score=328.22 Aligned_cols=287 Identities=22% Similarity=0.302 Sum_probs=218.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.||..+++||+|.||.||+|++.+||+.||||.++.... .-...+|++.|+.++|++++.++...
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F----------- 70 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVF----------- 70 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhc-----------
Confidence 589999999999999999999999999999998876533 23579999999999999987765432
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
...+..-||+||+..+|...++.....++..+++.|+.|++.||+|||++.|+||||||.|+|+
T Consensus 71 ----------------~~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi 134 (318)
T KOG0659|consen 71 ----------------PHKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI 134 (318)
T ss_pred ----------------cCCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE
Confidence 4556788999999999999999878889999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ .++.+||+|||+|+.+..+.... ...+-|.+|+|||.+.|.. |+..+||||.|||+.||+.|.+.|.|
T Consensus 135 s---~~g~lKiADFGLAr~f~~p~~~~-------~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG 204 (318)
T KOG0659|consen 135 S---SDGQLKIADFGLARFFGSPNRIQ-------THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG 204 (318)
T ss_pred c---CCCcEEeecccchhccCCCCccc-------ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC
Confidence 5 89999999999999988765432 1226799999999999875 89999999999999999999999999
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCCCccccc--ccc
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW--TIL 319 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~dw--~~l 319 (449)
.++.+....+..+ +..|.+..|.++. ++.++...-....|..+ .+|.....+. +|. .++
T Consensus 205 ~sDidQL~~If~~----LGTP~~~~WP~~~-~lpdY~~~~~~P~~~~~-----------~lf~aas~d~---ldLl~~m~ 265 (318)
T KOG0659|consen 205 DSDIDQLSKIFRA----LGTPTPDQWPEMT-SLPDYVKIQQFPKPPLN-----------NLFPAASSDA---LDLLSKML 265 (318)
T ss_pred CchHHHHHHHHHH----cCCCCcccCcccc-ccccHHHHhcCCCCccc-----------cccccccHHH---HHHHHhhh
Confidence 8776554444333 3344444442211 22223222222222222 1111111111 111 678
Q ss_pred cccccccccccccCCCCccccCCCCcccccc
Q 013125 320 KYQQTQKTKSQDLLPASRVTNSRVMPMRTDK 350 (449)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (449)
.|+|.+|.++++++.|+++.+ ...+....+
T Consensus 266 ~ynP~~Rita~qaL~~~yf~~-~P~pt~~~~ 295 (318)
T KOG0659|consen 266 TYNPKKRITASQALKHPYFKS-LPLPTPPSK 295 (318)
T ss_pred ccCchhcccHHHHhcchhhhc-CCCCCChhh
Confidence 889999999999999999887 333443333
No 16
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-46 Score=341.85 Aligned_cols=287 Identities=23% Similarity=0.349 Sum_probs=227.1
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCch----hHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----QLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+.|+.+++|++|+||.||+|+|++|++.||+|.++-+.... ..++|+.+|..++|+||+..-.+.+
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVv---------- 145 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVV---------- 145 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEe----------
Confidence 57899999999999999999999999999999887654433 2589999999999999887665543
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
|.+-+.+|||||||..+|..++....++|...+++.+..|++.||+|||...|+|||||++|+|+
T Consensus 146 ---------------G~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm 210 (419)
T KOG0663|consen 146 ---------------GSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL 210 (419)
T ss_pred ---------------ccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee
Confidence 45667799999999999999999888899999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
. ..|.+||+|||+|+.+..+.. .....+.|.+|+|||++++.. |+..+|+||+|||+.||+++++.|.|
T Consensus 211 ~---~~G~lKiaDFGLAR~ygsp~k-------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G 280 (419)
T KOG0663|consen 211 S---HKGILKIADFGLAREYGSPLK-------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPG 280 (419)
T ss_pred c---cCCcEEecccchhhhhcCCcc-------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCC
Confidence 5 889999999999998877632 235778899999999999876 89999999999999999999999999
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-HHhcCCCCCccccccccc
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL-FSREGYDFDFVFDWTILK 320 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~-~~~~~~~~~~~~dw~~l~ 320 (449)
....+...++.. .+..|.+..|.++..- ...-.....+-| +..+...|... +...+++. --.++.
T Consensus 281 ~sE~dQl~~If~----llGtPte~iwpg~~~l-----p~~k~~~f~~~p-yn~lr~kF~~~~lse~g~~L----ln~llt 346 (419)
T KOG0663|consen 281 KSEIDQLDKIFK----LLGTPSEAIWPGYSEL-----PAVKKMTFSEHP-YNNLRKKFGALSLSEQGFDL----LNKLLT 346 (419)
T ss_pred CchHHHHHHHHH----HhCCCccccCCCcccc-----chhhccccCCCC-chhhhhhccccccchhHHHH----HHHHhc
Confidence 776654444433 3446667666554320 000012222333 33355544433 22222211 126788
Q ss_pred ccccccccccccCCCCccccCC
Q 013125 321 YQQTQKTKSQDLLPASRVTNSR 342 (449)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~ 342 (449)
|+|.+|.++.+++.|.||.+..
T Consensus 347 ~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 347 YDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred cCccccccHHHhhcccccccCC
Confidence 9999999999999999998755
No 17
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.6e-45 Score=352.36 Aligned_cols=270 Identities=24% Similarity=0.336 Sum_probs=211.9
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
+--+.|++++.||+|+||+||+|+.+.||+.+|+|++++..- ......|..+|..-.
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d------------------ 199 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD------------------ 199 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC------------------
Confidence 345789999999999999999999999999999999886432 112444555554433
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
.+.++++++.+.+.+++||||||+ ||++..++.. ...|++..++.++.+++.||+-||..|+|||||||
T Consensus 200 ---------s~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~-~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKP 269 (550)
T KOG0605|consen 200 ---------SPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMR-KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKP 269 (550)
T ss_pred ---------CCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHh-cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCCh
Confidence 336777888889999999999999 9999999886 66799999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCC------------------Ccccc-----cc-----------------CCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTT------------------NRHIP-----YR-----------------ENK 197 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~------------------~~~~~-----~~-----------------~~~ 197 (449)
+|+|| |..|++||+|||||..+..... ....+ .+ ...
T Consensus 270 dNlLi---D~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~ 346 (550)
T KOG0605|consen 270 DNLLI---DAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAY 346 (550)
T ss_pred hheee---cCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhh
Confidence 99999 6999999999999964322000 00001 00 123
Q ss_pred CCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhh--cCCCHHHhhccChHHHH
Q 013125 198 NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK--VSTPIEVLCKSHPAEFA 275 (449)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~ 275 (449)
+.+|||-|+|||++.+..|+..||+||||||+|||+.|.+||.+..+. +.+.+|+.-+ +..|...-+ .++..
T Consensus 347 StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~---~T~rkI~nwr~~l~fP~~~~~---s~eA~ 420 (550)
T KOG0605|consen 347 STVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQ---ETYRKIVNWRETLKFPEEVDL---SDEAK 420 (550)
T ss_pred cccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhhhccCCCcCcc---cHHHH
Confidence 578999999999999999999999999999999999999999986654 4555555444 444544332 58999
Q ss_pred HHHHHHhCCCCCCCCC---HHHHHHHHHHHHHhcCCCCCcccccccccc
Q 013125 276 SYFHYCQSLTFDQRPD---YGFLKRLFHDLFSREGYDFDFVFDWTILKY 321 (449)
Q Consensus 276 ~l~~~~l~~~p~~Rp~---~~~l~~~l~~~~~~~~~~~~~~~dw~~l~~ 321 (449)
+||.+|+. ||++|.. +++|.+ ..|....||..+..
T Consensus 421 DLI~rll~-d~~~RLG~~G~~EIK~----------HPfF~~v~W~~l~~ 458 (550)
T KOG0605|consen 421 DLITRLLC-DPENRLGSKGAEEIKK----------HPFFKGVDWDHLRE 458 (550)
T ss_pred HHHHHHhc-CHHHhcCcccHHHHhc----------CCccccCCcchhhc
Confidence 99999998 9999976 444433 45666678865543
No 18
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-45 Score=329.51 Aligned_cols=235 Identities=23% Similarity=0.342 Sum_probs=206.5
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
-++|++++.||.|+||.|.+++++.++..+|+|+++++.- .+...+|..+|+.+.|+.++++
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l------------- 109 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKL------------- 109 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEE-------------
Confidence 3679999999999999999999999999999999876532 2235778888888887765544
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
.+...+....||||||. ||-|..+++. .++|+.+.++.++.||+.||+|||+++|++|||||+|
T Consensus 110 --------------~~t~~d~~~lymvmeyv~GGElFS~Lrk-~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPEN 174 (355)
T KOG0616|consen 110 --------------YGTFKDNSNLYMVMEYVPGGELFSYLRK-SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPEN 174 (355)
T ss_pred --------------EEeeccCCeEEEEEeccCCccHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHH
Confidence 33445778999999999 8999999887 4579999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
||+ |..|.+||+|||.|+.....+ .++|||+.|+|||++...+|+.++|+||||+++|||+.|.+||
T Consensus 175 iLl---D~~G~iKitDFGFAK~v~~rT----------~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF 241 (355)
T KOG0616|consen 175 LLL---DQNGHIKITDFGFAKRVSGRT----------WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPF 241 (355)
T ss_pred eee---ccCCcEEEEeccceEEecCcE----------EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 999 689999999999999877653 3789999999999999999999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCC
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQR 289 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R 289 (449)
....+ .+.+.+|+..++..|.- +..++++|+...++.|-.+|
T Consensus 242 ~~~~~---~~iY~KI~~~~v~fP~~-----fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 242 YDDNP---IQIYEKILEGKVKFPSY-----FSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cCCCh---HHHHHHHHhCcccCCcc-----cCHHHHHHHHHHHhhhhHhh
Confidence 98665 57889999999988843 37899999999999998888
No 19
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.7e-44 Score=356.47 Aligned_cols=305 Identities=21% Similarity=0.305 Sum_probs=221.7
Q ss_pred CcccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHc-CCCcceeeEeecchhhhhh
Q 013125 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 2 ~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~ 79 (449)
++.++.||.|++.||+|+||.|-+|+|.+|++.|||||+++... ..+...|+.+|..|+ +.+-...
T Consensus 181 ~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~------------ 248 (586)
T KOG0667|consen 181 NDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY------------ 248 (586)
T ss_pred cceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe------------
Confidence 45667799999999999999999999999999999999987643 445678999999988 3321111
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
++..++.++...+|.|||+|+++.+|.++++... ..|++..++.++.||+.||.+||+.||||+||||+
T Consensus 249 ----------n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPE 318 (586)
T KOG0667|consen 249 ----------NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPE 318 (586)
T ss_pred ----------eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChh
Confidence 6677788889999999999999999999998653 46999999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
|||+-.. ....|||+|||.|......-. ....+..|+|||+|+|.+|+.++||||||||++||.+|.+.
T Consensus 319 NILL~~~-~r~~vKVIDFGSSc~~~q~vy----------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PL 387 (586)
T KOG0667|consen 319 NILLKDP-KRSRIKVIDFGSSCFESQRVY----------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPL 387 (586)
T ss_pred heeeccC-CcCceeEEecccccccCCcce----------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccc
Confidence 9999543 345899999999976543321 55678899999999999999999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHH-------HhCCCCCCCCCHHHHHHHHHHHHHhcCC---
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHY-------CQSLTFDQRPDYGFLKRLFHDLFSREGY--- 308 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-------~l~~~p~~Rp~~~~l~~~l~~~~~~~~~--- 308 (449)
|.|.+..+ .+..|++....+|...+. .... ...++.. |-..+-.+-....+....++........
T Consensus 388 fpG~ne~D---Ql~~I~e~lG~Pp~~mL~-~~~~-~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~ 462 (586)
T KOG0667|consen 388 FPGDNEYD---QLARIIEVLGLPPPKMLD-TAKK-AHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPG 462 (586)
T ss_pred cCCCCHHH---HHHHHHHHhCCCCHHHHH-hccc-cceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCC
Confidence 99976654 445555555544433221 1111 1222222 2222200000111111111111111000
Q ss_pred -----------CCCcccc--cccccccccccccccccCCCCccccCCCC
Q 013125 309 -----------DFDFVFD--WTILKYQQTQKTKSQDLLPASRVTNSRVM 344 (449)
Q Consensus 309 -----------~~~~~~d--w~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (449)
+.....| -.+++++|..|.+..+++.|+|++.....
T Consensus 463 ~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~~ 511 (586)
T KOG0667|consen 463 SRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSLE 511 (586)
T ss_pred CcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccccc
Confidence 0011122 27789999999999999999999866544
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-44 Score=338.51 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=202.0
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
.+|..++.||+|+||.||++.+.++++.+|||.+.... ..+.+.+|+++|..|+|+++++..+...
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~------------ 84 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSS------------ 84 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccc------------
Confidence 46889999999999999999999999999999765431 1345899999999999998777655321
Q ss_pred cccCCCcCeeEEecccC-CeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 85 SSTLGGIPNIKWYGVDG-EDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~-~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
... ..+++.|||+ +|+|.+++...+.++++..++.+.+||++||+|||++|||||||||+|||+
T Consensus 85 --------------~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl 150 (313)
T KOG0198|consen 85 --------------SRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL 150 (313)
T ss_pred --------------cccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE
Confidence 112 3689999999 999999999766589999999999999999999999999999999999999
Q ss_pred ecCCC-CCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 163 GLGRK-ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 163 ~~~~~-~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
. . ++.+||+|||+++........ ........||+.|||||++... ...+.+|||||||++.||+||+.||.
T Consensus 151 ~---~~~~~~KlaDFG~a~~~~~~~~~----~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~ 223 (313)
T KOG0198|consen 151 D---PSNGDVKLADFGLAKKLESKGTK----SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWS 223 (313)
T ss_pred e---CCCCeEEeccCcccccccccccc----ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcch
Confidence 4 5 689999999999876641111 1223467899999999999953 34469999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.. ......+..+..... .+.+...++++.++++..|+..+|.+||++.++.+
T Consensus 224 ~~--~~~~~~~~~ig~~~~---~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 224 EF--FEEAEALLLIGREDS---LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLE 275 (313)
T ss_pred hh--cchHHHHHHHhccCC---CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 74 122223333333331 22444567899999999999999999999988744
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-43 Score=343.22 Aligned_cols=247 Identities=28% Similarity=0.391 Sum_probs=208.3
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-------CCchhHHHHHHHHHHHc-CCCcceeeEeecchh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-------TKHPQLLYEAKVYKILQ-GGSKIRLVVFHVDHV 75 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-------~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~ 75 (449)
...++|++++.||+|+||.|++|.+..+++.||+|+++.. .....+.+|+.+++.+. |++++++..+.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~---- 89 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF---- 89 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE----
Confidence 4568999999999999999999999999999999987764 12335668999999999 88776665432
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRD 154 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrD 154 (449)
......|+||||+ ||+|.+.+.. ..++.+..++.+++||+.|++|||++||+|||
T Consensus 90 -----------------------~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRD 145 (370)
T KOG0583|consen 90 -----------------------ATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRD 145 (370)
T ss_pred -----------------------ecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCC
Confidence 4456699999999 8899999998 78899999999999999999999999999999
Q ss_pred CCCCcEEeecCCCC-CeEEEEeecceeeec-CCCCCccccccCCCCCCCCccccccccccCCC-C-CccchHHHHHHHHH
Q 013125 155 IKPDNFLMGLGRKA-NQVYIIDFGLAKKYR-DPTTNRHIPYRENKNLTGTARYASCNTHLGIE-Q-SRRDDLESLGYVLL 230 (449)
Q Consensus 155 Lkp~Nill~~~~~~-~~vkL~DfGla~~~~-~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-s~~~DvwSlG~il~ 230 (449)
|||+|||+. .+ +.+||+|||++.... ... ...+.+||+.|+|||++.+.. | +.++||||+|++||
T Consensus 146 LK~ENilld---~~~~~~Kl~DFG~s~~~~~~~~--------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy 214 (370)
T KOG0583|consen 146 LKPENILLD---GNEGNLKLSDFGLSAISPGEDG--------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILY 214 (370)
T ss_pred CCHHHEEec---CCCCCEEEeccccccccCCCCC--------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHH
Confidence 999999994 56 899999999998774 222 135889999999999999987 7 48999999999999
Q ss_pred HHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 231 YFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 231 el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
.|++|..||..... ...+.+|....+..|.-.. +++++.|+..|+..+|.+|+++.+|.
T Consensus 215 ~ml~G~~PF~d~~~---~~l~~ki~~~~~~~p~~~~----S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 215 VLLCGRLPFDDSNV---PNLYRKIRKGEFKIPSYLL----SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHHhCCCCCCCccH---HHHHHHHhcCCccCCCCcC----CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 99999999987433 3455556666665553221 78899999999999999999998885
No 22
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-44 Score=330.08 Aligned_cols=257 Identities=22% Similarity=0.254 Sum_probs=199.0
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecC----CCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENS----GTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+..+|..++.||+|+||.|+.|.+..+++.||||.+.. .....+..+|+++++.++|+|++.........
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~------ 93 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPP------ 93 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccc------
Confidence 45678889999999999999999999999999997652 23345689999999999999988876554321
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
....-+.+|+|+|+|+.+|..+++. ++.++...+..+++||++||+|+|+.+|+||||||.|+
T Consensus 94 ----------------~~~~f~DvYiV~elMetDL~~iik~-~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNl 156 (359)
T KOG0660|consen 94 ----------------SRDKFNDVYLVFELMETDLHQIIKS-QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNL 156 (359)
T ss_pred ----------------cccccceeEEehhHHhhHHHHHHHc-CccccHHHHHHHHHHHHHhcchhhcccccccccchhhe
Confidence 1124577899999999999999885 55699999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-CCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-GIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
|+ +.++.+||+|||+|+......... .....+.|.+|+|||++. ...|+..+||||+|||+.||++|++.|
T Consensus 157 l~---n~~c~lKI~DFGLAR~~~~~~~~~-----~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplF 228 (359)
T KOG0660|consen 157 LL---NADCDLKICDFGLARYLDKFFEDG-----FMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLF 228 (359)
T ss_pred ee---ccCCCEEeccccceeeccccCccc-----chhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCC
Confidence 99 588999999999999876431111 124678899999999765 456999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCC--------------------------CHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 240 QGLKAATKKQKYDKICEKKVST--------------------------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~--------------------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
.|.+....... |......+ +...+..+.++...+|++++|..||.+|++++
T Consensus 229 pG~d~v~Ql~l---I~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~ 305 (359)
T KOG0660|consen 229 PGKDYVHQLQL---ILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAE 305 (359)
T ss_pred CCCchHHHHHH---HHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHH
Confidence 98654433322 22222222 22333444555666666666666666666655
Q ss_pred HH
Q 013125 294 FL 295 (449)
Q Consensus 294 ~l 295 (449)
+.
T Consensus 306 eA 307 (359)
T KOG0660|consen 306 EA 307 (359)
T ss_pred HH
Confidence 43
No 23
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.7e-44 Score=333.06 Aligned_cols=268 Identities=21% Similarity=0.334 Sum_probs=217.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++++.||+|.-|+||+|+...++..+|+||+.+. .+..+...|.+||..+.|+
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHP------------------- 137 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHP------------------- 137 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCC-------------------
Confidence 5788999999999999999999999999999998764 2333567788888888876
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
.+|.++......++.||||||| ||+|..+++.. ++.|++..++.|+.+++.||+|||-.|||+|||||+|
T Consensus 138 --------FlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPEN 209 (459)
T KOG0610|consen 138 --------FLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPEN 209 (459)
T ss_pred --------ccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcce
Confidence 6777877788899999999999 99999999865 5679999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCC-----------------------------c-c------------------c
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTN-----------------------------R-H------------------I 191 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~-----------------------------~-~------------------~ 191 (449)
||| .++|+|.|+||.|+.......+. . . -
T Consensus 210 ILv---redGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~ae 286 (459)
T KOG0610|consen 210 ILV---REDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAE 286 (459)
T ss_pred eEE---ecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcC
Confidence 999 58999999999998643210000 0 0 0
Q ss_pred cc-cCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccC
Q 013125 192 PY-RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSH 270 (449)
Q Consensus 192 ~~-~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 270 (449)
|- ...++++||-.|.|||++.|..-+.++|+|+||+++|||++|..||.|.... +.+..|+......|-.. ..
T Consensus 287 p~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~---~Tl~NIv~~~l~Fp~~~---~v 360 (459)
T KOG0610|consen 287 PTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNK---ETLRNIVGQPLKFPEEP---EV 360 (459)
T ss_pred CCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCch---hhHHHHhcCCCcCCCCC---cc
Confidence 00 1235788999999999999999999999999999999999999999986654 55666666655555322 33
Q ss_pred hHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHHHhcCCCCCccccccccc
Q 013125 271 PAEFASYFHYCQSLTFDQRPD----YGFLKRLFHDLFSREGYDFDFVFDWTILK 320 (449)
Q Consensus 271 ~~~~~~l~~~~l~~~p~~Rp~----~~~l~~~l~~~~~~~~~~~~~~~dw~~l~ 320 (449)
+...++||...|.+||.+|.. +.+|++ +.|....+|..+.
T Consensus 361 s~~akDLIr~LLvKdP~kRlg~~rGA~eIK~----------HpFF~gVnWaLir 404 (459)
T KOG0610|consen 361 SSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR----------HPFFEGVNWALIR 404 (459)
T ss_pred hhHHHHHHHHHhccChhhhhccccchHHhhc----------CccccCCChhhee
Confidence 578999999999999999987 444433 5666677887554
No 24
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-43 Score=349.64 Aligned_cols=243 Identities=23% Similarity=0.344 Sum_probs=205.4
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
+--++|++++.||+|+||+|++|..+.+++.+|||+++++ ++.+....|.+|+.....
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~----------------- 427 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANR----------------- 427 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhcc-----------------
Confidence 4457899999999999999999999999999999998876 334457888888877652
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
||.+.+++.++...+++|+||||+ ||++..+. ....|++..++.|+..++.||.|||++||||||||.
T Consensus 428 ---------HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKL 496 (694)
T KOG0694|consen 428 ---------HPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKL 496 (694)
T ss_pred ---------CCeEeecccccccCCeEEEEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecch
Confidence 235666677778889999999999 77733222 246799999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+|||+ |..|++||+|||+++....... ...+++||+.|+|||++.+..|++++|+|||||+||||+.|..
T Consensus 497 dNiLL---D~eGh~kiADFGlcKe~m~~g~-------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~ 566 (694)
T KOG0694|consen 497 DNLLL---DTEGHVKIADFGLCKEGMGQGD-------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGES 566 (694)
T ss_pred hheEE---cccCcEEecccccccccCCCCC-------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCC
Confidence 99999 6899999999999986543222 2368999999999999999999999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
||.|.+.. +.+..|+......| ..++.+...+|+.++..+|++|..+
T Consensus 567 PF~gddEe---e~FdsI~~d~~~yP-----~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 567 PFPGDDEE---EVFDSIVNDEVRYP-----RFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCCHH---HHHHHHhcCCCCCC-----CcccHHHHHHHHHHhccCcccccCC
Confidence 99986543 56667777666655 3458899999999999999999865
No 25
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.8e-43 Score=336.84 Aligned_cols=245 Identities=23% Similarity=0.320 Sum_probs=209.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCch----hHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----QLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|.+.+.||+|+||.||+|+.+.+.+.||||.+.+....+ .+.+|++|++.|+|+|++.++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~-------------- 67 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEML-------------- 67 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHH--------------
Confidence 57999999999999999999999999999999887653322 378999999999999866542
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
.+++...+.|+|.||+-|+|..++.+ ...++++.+..+++|++.||.|||+.+|+|||+||.|||+
T Consensus 68 -------------esfEt~~~~~vVte~a~g~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl 133 (808)
T KOG0597|consen 68 -------------ESFETSAHLWVVTEYAVGDLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL 133 (808)
T ss_pred -------------HhhcccceEEEEehhhhhhHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee
Confidence 23467789999999997799999987 6789999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+.++.+|++|||+|+.+...+. ......||+.|||||+..+.+|+..+|+||+||++|||+.|++||...
T Consensus 134 ---~~~~~~KlcdFg~Ar~m~~~t~-------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~ 203 (808)
T KOG0597|consen 134 ---EKGGTLKLCDFGLARAMSTNTS-------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR 203 (808)
T ss_pred ---cCCCceeechhhhhhhcccCce-------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH
Confidence 5899999999999998765432 235778999999999999999999999999999999999999999864
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.- .+.+..|.......|. .....|..+++..+..||.+|.+..++..
T Consensus 204 si---~~Lv~~I~~d~v~~p~-----~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 204 SI---TQLVKSILKDPVKPPS-----TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HH---HHHHHHHhcCCCCCcc-----cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 32 3455556555555554 44789999999999999999999877644
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-43 Score=342.16 Aligned_cols=247 Identities=22% Similarity=0.369 Sum_probs=206.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC--CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG--TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
..|...++||+|+.|.||.|....+++.||||.+... ...+-+++|+.+|+.++|+|+++++...
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sy------------- 339 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSY------------- 339 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHh-------------
Confidence 5788999999999999999999999999999987654 4455689999999999999987764321
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
..++..|+||||+ ||+|.|++.. ..+++.++..+.++++.||+|||.+||||||||.+|||++
T Consensus 340 --------------lv~deLWVVMEym~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~ 403 (550)
T KOG0578|consen 340 --------------LVGDELWVVMEYMEGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT 403 (550)
T ss_pred --------------cccceeEEEEeecCCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec
Confidence 2337899999999 9999999874 4489999999999999999999999999999999999995
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCCh
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~ 243 (449)
.++.+||+|||++..+...... ..+.+||+.|||||++....|+.++||||||++++||+.|.+||-...
T Consensus 404 ---~~g~vKltDFGFcaqi~~~~~K-------R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~ 473 (550)
T KOG0578|consen 404 ---MDGSVKLTDFGFCAQISEEQSK-------RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN 473 (550)
T ss_pred ---cCCcEEEeeeeeeeccccccCc-------cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC
Confidence 7888999999999887765542 368899999999999999999999999999999999999999998644
Q ss_pred hhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
+. ..+..|.... . |.-.....++++|++++.+||..|+++|+++.+|++
T Consensus 474 Pl---rAlyLIa~ng-~-P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 474 PL---RALYLIATNG-T-PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred hH---HHHHHHhhcC-C-CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 32 2222222221 1 111223456789999999999999999999998855
No 27
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.8e-42 Score=336.36 Aligned_cols=263 Identities=19% Similarity=0.319 Sum_probs=203.3
Q ss_pred cccCCceEEeeeecccCceeEEEEEEc-----CCCceEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeecc
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHVD 73 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~~ 73 (449)
+|-.++|++.++||+|+||.||+|.+. .+++.||||++..... ...+.+|+.++..+ +|++++.+++.+
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~-- 80 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGAC-- 80 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEe--
Confidence 456789999999999999999999853 3456799999875432 23578899999998 788766654432
Q ss_pred hhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-----------------------------
Q 013125 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR----------------------------- 123 (449)
Q Consensus 74 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~----------------------------- 123 (449)
.......++||||+ +++|.+++....
T Consensus 81 ------------------------~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (338)
T cd05102 81 ------------------------TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRR 136 (338)
T ss_pred ------------------------cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccc
Confidence 12345679999999 899998886431
Q ss_pred --------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeE
Q 013125 124 --------------------------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 171 (449)
Q Consensus 124 --------------------------------~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~v 171 (449)
..+++..+..++.||+.||+|||++||+||||||+|||++ .++.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~ 213 (338)
T cd05102 137 IEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVV 213 (338)
T ss_pred cccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcE
Confidence 2477889999999999999999999999999999999994 67899
Q ss_pred EEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHH
Q 013125 172 YIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQK 250 (449)
Q Consensus 172 kL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~ 250 (449)
||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.+..... .
T Consensus 214 kl~DfG~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~---~ 285 (338)
T cd05102 214 KICDFGLARDIYKDPDY-----VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE---E 285 (338)
T ss_pred EEeecccccccccCcch-----hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH---H
Confidence 99999999865432211 11234456788999999999999999999999999999997 999998754321 1
Q ss_pred HHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 251 YDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 251 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
+........... .....++++.+++..||..||.+||++.+|.+.|++++..
T Consensus 286 ~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 286 FCQRLKDGTRMR---APENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHhcCCCCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111111111111 1235578999999999999999999999999999987653
No 28
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-42 Score=321.91 Aligned_cols=258 Identities=20% Similarity=0.278 Sum_probs=210.0
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC---CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG---TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+-.+.|++.+.||.|.-++||+|+...+++.||||+++.+ ++.+.+.+|++.|..++|+|++..+
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~------------ 90 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYH------------ 90 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEE------------
Confidence 3467899999999999999999999999999999998754 3345789999999999999866543
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
..+..+...|+||.|| +|++.++++.. ...|++..+..|+++++.||.|||.+|.||||||+.
T Consensus 91 ---------------~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAg 155 (516)
T KOG0582|consen 91 ---------------CSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAG 155 (516)
T ss_pred ---------------EEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccc
Confidence 3445678899999999 99999999843 556999999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC--CCCccchHHHHHHHHHHHHhCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI--EQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~DvwSlG~il~el~~G~ 236 (449)
|||| +++|.|||+|||.+..+..... ..-++- +.++||++|||||++... .|+.|+||||||++..||++|.
T Consensus 156 nILi---~~dG~VkLadFgvsa~l~~~G~--R~~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~ 229 (516)
T KOG0582|consen 156 NILI---DSDGTVKLADFGVSASLFDSGD--RQVTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGH 229 (516)
T ss_pred cEEE---cCCCcEEEcCceeeeeecccCc--eeeEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCC
Confidence 9999 5899999999998877665442 222333 788999999999996643 5999999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcC-----CCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVS-----TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.||..+.+.. ..+.+ ++...+ .......+.++..|++++..|+..||.+||++.++..
T Consensus 230 aPf~k~pPmk--vLl~t-Lqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 230 APFSKYPPMK--VLLLT-LQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CCcccCChHH--HHHHH-hcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 9999876542 11222 222221 1122233455678999999999999999999988755
No 29
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.7e-43 Score=353.99 Aligned_cols=260 Identities=23% Similarity=0.354 Sum_probs=219.9
Q ss_pred cCCceEEeeeecccCceeEEEEEEc-----CCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
-....+..+.||+|+||+||+|+.. +....||||.++..... .+|.+|++++..|+|+|+++++++|
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC----- 558 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC----- 558 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----
Confidence 3456788999999999999999874 23457999999876554 4599999999999999999998887
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------CC----CCHHHHHHHHHHHHHHH
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------RK----FSLKTVLMLADQMIARI 142 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------~~----~~~~~~~~i~~qil~~L 142 (449)
.+++..|||+||| .|+|.+++..+. .. ++..+.+.|+.||+.||
T Consensus 559 ----------------------~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM 616 (774)
T KOG1026|consen 559 ----------------------REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGM 616 (774)
T ss_pred ----------------------ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 4678999999999 999999997642 22 78899999999999999
Q ss_pred HHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchH
Q 013125 143 EYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDL 222 (449)
Q Consensus 143 ~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv 222 (449)
+||-++.+|||||..+|+||+ +...|||+|||+++..-..++ |+....-.-+.+||+||.|...+++.++||
T Consensus 617 ~YLs~~~FVHRDLATRNCLVg---e~l~VKIsDfGLsRdiYssDY-----Yk~~~~t~lPIRWMppEsIly~kFTteSDV 688 (774)
T KOG1026|consen 617 EYLSSHHFVHRDLATRNCLVG---ENLVVKISDFGLSRDIYSSDY-----YKVRGNTLLPIRWMPPESILYGKFTTESDV 688 (774)
T ss_pred HHHHhCcccccchhhhhceec---cceEEEecccccchhhhhhhh-----hcccCCceeeeecCCHHHhhcCcccchhhh
Confidence 999999999999999999995 899999999999997766554 344434455789999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 223 ESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 223 wSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
|||||+|||+++ |+.||.+..+.+..+. |..+.+ .+.+ +++|.++++||..||..+|.+||+|++|...|+.
T Consensus 689 Ws~GVvLWEIFsyG~QPy~glSn~EVIe~---i~~g~l-L~~P---e~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~ 761 (774)
T KOG1026|consen 689 WSFGVVLWEIFSYGKQPYYGLSNQEVIEC---IRAGQL-LSCP---ENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQA 761 (774)
T ss_pred hhhhhhhhhhhccccCcccccchHHHHHH---HHcCCc-ccCC---CCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHH
Confidence 999999999998 9999999887654444 333333 2223 5669999999999999999999999999999998
Q ss_pred HHHhc
Q 013125 302 LFSRE 306 (449)
Q Consensus 302 ~~~~~ 306 (449)
.....
T Consensus 762 ~~~~s 766 (774)
T KOG1026|consen 762 WAQAS 766 (774)
T ss_pred HHhcC
Confidence 76654
No 30
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-43 Score=329.05 Aligned_cols=253 Identities=21% Similarity=0.310 Sum_probs=207.5
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
...|+.++.||+|+||.||+|.+..+++.||+|++...... +.+..|+.++..++++++..++
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yy-------------- 77 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYY-------------- 77 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhh--------------
Confidence 45788999999999999999999999999999998866443 3477899999888886654433
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
.....+...+++|||| ||++.++++. +..+.+..+..++++++.||.|||+++.+|||||+.|||
T Consensus 78 -------------gsyl~g~~LwiiMey~~gGsv~~lL~~-~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil 143 (467)
T KOG0201|consen 78 -------------GSYLKGTKLWIIMEYCGGGSVLDLLKS-GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANIL 143 (467)
T ss_pred -------------hheeecccHHHHHHHhcCcchhhhhcc-CCCCccceeeeehHHHHHHhhhhhhcceeccccccccee
Confidence 2334667889999999 9999999885 344588888899999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+. ..+.+||+|||.+-........ ..+++||+.|||||++.+..|+.++||||||++++||++|.+||..
T Consensus 144 ~s---~~g~vkl~DfgVa~ql~~~~~r-------r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~ 213 (467)
T KOG0201|consen 144 LS---ESGDVKLADFGVAGQLTNTVKR-------RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSK 213 (467)
T ss_pred Ee---ccCcEEEEecceeeeeechhhc-------cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcc
Confidence 96 5699999999999877655432 2689999999999999988999999999999999999999999998
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
..+...... .-...++.+...+.+.+++++..||..||+.||++.+|.. +++++.
T Consensus 214 ~hPmrvlfl-------Ipk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK--h~FIk~ 268 (467)
T KOG0201|consen 214 LHPMRVLFL-------IPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK--HKFIKR 268 (467)
T ss_pred cCcceEEEe-------ccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh--hHHHHh
Confidence 776321111 1112233444567889999999999999999999988754 444444
No 31
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-43 Score=339.24 Aligned_cols=259 Identities=22% Similarity=0.315 Sum_probs=207.9
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCch----hHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----QLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
|..+...++++||+|.||+||+|++.. .||||+++-+...+ .|.+|+.+|++-+|.|++.+.+.+
T Consensus 389 Ip~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~-------- 457 (678)
T KOG0193|consen 389 IPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGAC-------- 457 (678)
T ss_pred cCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhh--------
Confidence 556778899999999999999999954 49999988664433 488999999999999877665533
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
.+... .||+.+| |.+|..++.-...+|.+.+.+.|++||++||.|||.++|||||||..
T Consensus 458 -------------------~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSn 517 (678)
T KOG0193|consen 458 -------------------MNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSN 517 (678)
T ss_pred -------------------cCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhcccc
Confidence 33333 8999999 78899888876788999999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC---CCCCccchHHHHHHHHHHHHhC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG---IEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DvwSlG~il~el~~G 235 (449)
||++ .+++.|||+|||++..-..-.... ....-.|...|||||+++. .+|++.+|||||||++|||++|
T Consensus 518 NIFl---~~~~kVkIgDFGLatvk~~w~g~~-----q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg 589 (678)
T KOG0193|consen 518 NIFL---HEDLKVKIGDFGLATVKTRWSGEQ-----QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTG 589 (678)
T ss_pred ceEE---ccCCcEEEecccceeeeeeecccc-----ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhC
Confidence 9999 467999999999986533211110 1234567889999999984 4589999999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 304 (449)
.+||.. ... .+.+..+..+.+.+.......++|.++++|+..||..++++||.|.+|...|++++.
T Consensus 590 ~lPysi-~~~--dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 590 ELPYSI-QNR--DQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred cCCcCC-CCh--hheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 999984 222 233333334434455555667789999999999999999999999999998887655
No 32
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.7e-41 Score=323.66 Aligned_cols=279 Identities=26% Similarity=0.445 Sum_probs=196.8
Q ss_pred CCcccCCceEEeeeecccCceeEEEEEEcCC---CceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 1 ~~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~---~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
+.++.+++|++.++||+|+||.||+|.+..+ +..+|+|+...... .+..|...++.+.+...+..
T Consensus 6 ~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~--~~~~e~~~~~~~~~~~~~~~---------- 73 (294)
T PHA02882 6 LIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENE--TIVMETLVYNNIYDIDKIAL---------- 73 (294)
T ss_pred eeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCC--chhhHHHHHHhhhhHHHHHH----------
Confidence 3578899999999999999999999998777 67788887543322 23334433333322211110
Q ss_pred hhhhhhhcccCCCcCeeEEecccCC----eeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGE----DNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHR 153 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHr 153 (449)
+..+....+.+++.+..++.... ..+++++++..++.+++.. ...++...++.++.|++.||+|||+++|+||
T Consensus 74 --~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHr 150 (294)
T PHA02882 74 --WKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHG 150 (294)
T ss_pred --HHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 01111223345666655544332 4578999998888888765 3446788899999999999999999999999
Q ss_pred CCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHH
Q 013125 154 DIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233 (449)
Q Consensus 154 DLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~ 233 (449)
||||+|||+ +..+.++|+|||+|+.+..................||+.|+|||++.+..++.++|||||||++|||+
T Consensus 151 DiKp~Nill---~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~ 227 (294)
T PHA02882 151 DIKPENIMV---DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWA 227 (294)
T ss_pred CCCHHHEEE---cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999 46789999999999876543221111111123457999999999999999999999999999999999
Q ss_pred hCCCCCCCChhhcHHHHHH--HHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 234 RGSLPWQGLKAATKKQKYD--KICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 234 ~G~~pf~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
+|++||.+........... .... .+... ......+|.++.+++..||.++|++||+|.+|.+.|
T Consensus 228 ~g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 228 GIKLPWKGFGHNGNLIHAAKCDFIK-RLHEG-KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hCCCCCCccccchHHHHHhHHHHHH-Hhhhh-hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 9999998763322111110 0111 11100 112345688999999999999999999999998765
No 33
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-42 Score=321.71 Aligned_cols=252 Identities=24% Similarity=0.298 Sum_probs=201.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
=+|+-.+.+|.|+||.||.|....+++.||||..-.+.. .-.+|+++|+++.|+|++++.......
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r--~knrEl~im~~l~HpNIV~L~~~f~~~------------ 89 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR--YKNRELQIMRKLDHPNIVRLLYFFSSS------------ 89 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC--cCcHHHHHHHhcCCcCeeeEEEEEEec------------
Confidence 368899999999999999999999999999997654332 346899999999999988875443221
Q ss_pred cCCCcCeeEEeccc-CCeeEEEEecCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 87 TLGGIPNIKWYGVD-GEDNVLVLDLLGPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 87 ~~~~i~~~~~~~~~-~~~~~lv~e~~g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
... .-+..+||||+..+|...++.- +..++.-.++.+.+||.+||.|||+.||+||||||+|+|+
T Consensus 90 -----------~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLv 158 (364)
T KOG0658|consen 90 -----------TESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLV 158 (364)
T ss_pred -----------CCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEE
Confidence 111 2356789999999999998742 5678999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
. .+.+.+||+|||.|+.......+ .++..|..|+|||.+.|.. |+.++||||.||++.||+-|++.|.|
T Consensus 159 D--~~tg~LKicDFGSAK~L~~~epn--------iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG 228 (364)
T KOG0658|consen 159 D--PDTGVLKICDFGSAKVLVKGEPN--------ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG 228 (364)
T ss_pred c--CCCCeEEeccCCcceeeccCCCc--------eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC
Confidence 6 56799999999999987765432 4667899999999999876 99999999999999999999999999
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHH------------------------HhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIE------------------------VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
.+..+....+.++++ .+..+ ......+++..+|+.+++..+|.+|.+..++.
T Consensus 229 ~s~~dQL~eIik~lG---~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 229 DSSVDQLVEIIKVLG---TPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred CCHHHHHHHHHHHhC---CCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 776655444433322 22111 12234567888888888888888888876653
No 34
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-42 Score=336.57 Aligned_cols=244 Identities=24% Similarity=0.347 Sum_probs=213.6
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
+-|++++.||.|+-|.|-+|++-.||+.+|||++.+..+ ...+.+|+-+|+.|.|+|+..++.+.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw---------- 81 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW---------- 81 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee----------
Confidence 679999999999999999999999999999999876522 23488999999999999987776653
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.+..++|+|.||+ ||-|.+++.. .+++++.++.++++||+.|+.|+|..+|+||||||+|+
T Consensus 82 -----------------e~~~~lylvlEyv~gGELFdylv~-kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENl 143 (786)
T KOG0588|consen 82 -----------------ENKQHLYLVLEYVPGGELFDYLVR-KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENL 143 (786)
T ss_pred -----------------ccCceEEEEEEecCCchhHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhh
Confidence 4668899999999 9999999886 56799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlG~il~el~~G~~pf 239 (449)
|+ +..+.+||+|||+|..-..... -.+.||.+.|+|||++.|.+| +.++||||.|+|||.|++|++||
T Consensus 144 LL---d~~~nIKIADFGMAsLe~~gkl--------LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPF 212 (786)
T KOG0588|consen 144 LL---DVKNNIKIADFGMASLEVPGKL--------LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPF 212 (786)
T ss_pred hh---hcccCEeeeccceeecccCCcc--------ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCC
Confidence 99 4677799999999986554432 357899999999999999998 78999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.+. .....+.++..+.+..| .+++.+.++|+..|+..||+.|.+.++|..
T Consensus 213 dDd---Nir~LLlKV~~G~f~MP-----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 213 DDD---NIRVLLLKVQRGVFEMP-----SNISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred CCc---cHHHHHHHHHcCcccCC-----CcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 853 34567778888888877 566899999999999999999999887744
No 35
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.3e-42 Score=316.80 Aligned_cols=291 Identities=20% Similarity=0.260 Sum_probs=210.6
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCch----hHHHHHHHHHHHcCCC-cceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----QLLYEAKVYKILQGGS-KIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~----~~~~E~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~~ 82 (449)
.|..+++||+|+||+||+|+++.+|+.||+|.+....+.+ ...+|+.+++.|+|.+ ++.+..+......
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~------ 85 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN------ 85 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc------
Confidence 4778899999999999999999999999999887654322 3689999999999999 6666555432210
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR---RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~---~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
.......++|+||+.-+|.+++.... ..++...++.+++||+.||+|||+++|+||||||+|
T Consensus 86 ---------------~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQN 150 (323)
T KOG0594|consen 86 ---------------HRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQN 150 (323)
T ss_pred ---------------ccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcce
Confidence 12234778999999999999999876 468889999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~p 238 (449)
|||+ +.+.+||+|||+|+.+.-+. +.....++|.+|+|||++.+. .|+..+||||+|||++||+++++.
T Consensus 151 lLi~---~~G~lKlaDFGlAra~~ip~-------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 151 LLIS---SSGVLKLADFGLARAFSIPM-------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred EEEC---CCCcEeeeccchHHHhcCCc-------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence 9994 79999999999998554332 234567889999999999998 599999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCCCccccccc
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTI 318 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~dw~~ 318 (449)
|.|..+.+....+.+ .+..|.+..|.+... +-+ +...+.+++....+...+. ....+..+.+. .+
T Consensus 221 FpG~se~~ql~~If~----~lGtP~e~~Wp~v~~----~~~--~k~~f~~~~~~~~l~~~~~----~~~~~~~dll~-~~ 285 (323)
T KOG0594|consen 221 FPGDSEIDQLFRIFR----LLGTPNEKDWPGVSS----LPD--YKAPFPKWPGPKDLSSILP----KLDPDGIELLS-KL 285 (323)
T ss_pred CCCCcHHHHHHHHHH----HcCCCCccCCCCccc----ccc--ccccCcCCCCccchHHhcc----ccCccHHHHHH-HH
Confidence 999877544333333 333444443322110 000 0001112221111211111 11111111111 67
Q ss_pred ccccccccccccccCCCCccccCCCC
Q 013125 319 LKYQQTQKTKSQDLLPASRVTNSRVM 344 (449)
Q Consensus 319 l~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (449)
++|++.+|.++..++.|+++......
T Consensus 286 L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 286 LQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred hccCcccCcCHHHHhcChhhcccccc
Confidence 88888888888888999888766543
No 36
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.3e-41 Score=321.60 Aligned_cols=249 Identities=22% Similarity=0.269 Sum_probs=192.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.++||.|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++|++++...
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~--------------- 69 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLH--------------- 69 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEE---------------
Confidence 57999999999999999999999999999999876432 233577899999999998755543
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
.++......++|||++.++|.+++..++..++...++.++.||+.||+|||++||+||||||+|||+
T Consensus 70 ------------~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~- 136 (288)
T cd07871 70 ------------DIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI- 136 (288)
T ss_pred ------------EEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE-
Confidence 3345567889999999889999888766778999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+.++.+||+|||+++....... ......++..|+|||++.+ ..++.++|||||||++|||++|++||.+.
T Consensus 137 --~~~~~~kl~DfG~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~ 207 (288)
T cd07871 137 --NEKGELKLADFGLARAKSVPTK-------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGS 207 (288)
T ss_pred --CCCCCEEECcCcceeeccCCCc-------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4788999999999976443221 1134567899999999876 56899999999999999999999999875
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHh--------------------------hccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVL--------------------------CKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
........+ ... ...+.... ....+.+..+++..|+..||.+||+++++.
T Consensus 208 ~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 208 TVKEELHLI---FRL-LGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred CHHHHHHHH---HHH-hCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 543322222 211 11111111 123355677777777777777777766653
No 37
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.8e-41 Score=324.04 Aligned_cols=236 Identities=25% Similarity=0.359 Sum_probs=195.3
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++|++++..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~-------------- 66 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRL-------------- 66 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhh--------------
Confidence 47999999999999999999999999999999876431 12347789999999998875543
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
..+..+.+..|+||||+ +++|.+++.. .+.++...++.++.||+.||+|||++||+||||||+||
T Consensus 67 -------------~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NI 132 (291)
T cd05612 67 -------------FWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENI 132 (291)
T ss_pred -------------HhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHe
Confidence 22335667899999999 8899998875 45789999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
|+ +.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 133 li---~~~~~~kl~Dfg~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~ 199 (291)
T cd05612 133 LL---DKEGHIKLTDFGFAKKLRDRT----------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFF 199 (291)
T ss_pred EE---CCCCCEEEEecCcchhccCCc----------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99 478899999999997654321 24578999999999999999999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
+.... ..+..+.......+ ...+..+++++..||..||.+|++
T Consensus 200 ~~~~~---~~~~~i~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 200 DDNPF---GIYEKILAGKLEFP-----RHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred CCCHH---HHHHHHHhCCcCCC-----ccCCHHHHHHHHHHcCCCHHHccC
Confidence 75432 33444444443333 234778999999999999999995
No 38
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=6.4e-41 Score=328.20 Aligned_cols=260 Identities=20% Similarity=0.271 Sum_probs=199.0
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.++||+|+||.||+|.+..+++.||||++... .....+.+|+++++.++|++++.........
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--------- 71 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPP--------- 71 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEecc---------
Confidence 699999999999999999999999999999987642 1233578899999999999877654432111
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
........|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 72 -------------~~~~~~~~~lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll- 136 (338)
T cd07859 72 -------------SRREFKDIYVVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA- 136 (338)
T ss_pred -------------CCCCCceEEEEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE-
Confidence 0112245799999999999988875 4569999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC--CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG--IEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+.++.+||+|||+++......... .......||..|+|||++.+ ..++.++|||||||++|||++|++||.+
T Consensus 137 --~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 137 --NADCKLKICDFGLARVAFNDTPTA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred --CCCCcEEEccCccccccccccCcc----ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 478899999999997654322111 01235678999999999876 5789999999999999999999999987
Q ss_pred ChhhcHHHHHHHH-----------------------HHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKI-----------------------CEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i-----------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.........+... .......+........++.+.+++..||..+|++||+++++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 211 KNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred CChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 5432211111110 1111122223333456788899999999999999999887754
No 39
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.7e-41 Score=321.50 Aligned_cols=242 Identities=19% Similarity=0.278 Sum_probs=193.0
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+|+++++.++|++++...
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~-------------- 66 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLA-------------- 66 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEE--------------
Confidence 3889999999999999999999999999999876431 122467899999999887655433
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
......+..|+||||+ +++|.+.+... ...+++..++.++.||+.||+|||++||+||||||+||
T Consensus 67 -------------~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Ni 133 (285)
T cd05631 67 -------------YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENI 133 (285)
T ss_pred -------------EEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHE
Confidence 3335567899999999 88998777543 34689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
|+ ++++.++|+|||++........ .....||..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 134 ll---~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 202 (285)
T cd05631 134 LL---DDRGHIRISDLGLAVQIPEGET--------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFR 202 (285)
T ss_pred EE---CCCCCEEEeeCCCcEEcCCCCe--------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCC
Confidence 99 4778999999999986543221 124578999999999999999999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
+.........+.... ...........+.++.+|+..||..||.+||+
T Consensus 203 ~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~ 249 (285)
T cd05631 203 KRKERVKREEVDRRV----KEDQEEYSEKFSEDAKSICRMLLTKNPKERLG 249 (285)
T ss_pred CCCcchhHHHHHHHh----hcccccCCccCCHHHHHHHHHHhhcCHHHhcC
Confidence 755432222222211 11122233456889999999999999999997
No 40
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.9e-41 Score=338.31 Aligned_cols=260 Identities=22% Similarity=0.233 Sum_probs=198.3
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
...++|+++++||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++|++++.+........
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~-------- 132 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTEC-------- 132 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecc--------
Confidence 45678999999999999999999999999999999875432 33567999999999999887654321110
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
..........++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus 133 -----------~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NI 201 (440)
T PTZ00036 133 -----------FKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNL 201 (440)
T ss_pred -----------cccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHE
Confidence 0001122356799999988988877642 45699999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
|++ .+.+.+||+|||+|+.+..... .....||+.|+|||++.+. .++.++|||||||++|||++|.+||
T Consensus 202 Ll~--~~~~~vkL~DFGla~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf 271 (440)
T PTZ00036 202 LID--PNTHTLKLCDFGSAKNLLAGQR--------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIF 271 (440)
T ss_pred EEc--CCCCceeeeccccchhccCCCC--------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 994 2345799999999986643221 1245789999999998764 5899999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCH------------------------HHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPI------------------------EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~------------------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
.+......... +......... ..+....+.++.+|+..||..+|.+||++.++
T Consensus 272 ~~~~~~~~~~~---i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~ 348 (440)
T PTZ00036 272 SGQSSVDQLVR---IIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEA 348 (440)
T ss_pred CCCChHHHHHH---HHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 87654332222 2221111110 11123457889999999999999999999887
Q ss_pred HH
Q 013125 296 KR 297 (449)
Q Consensus 296 ~~ 297 (449)
.+
T Consensus 349 l~ 350 (440)
T PTZ00036 349 LA 350 (440)
T ss_pred hC
Confidence 54
No 41
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=335.02 Aligned_cols=238 Identities=21% Similarity=0.311 Sum_probs=201.6
Q ss_pred EeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCC
Q 013125 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGG 90 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (449)
-++.||+|+.|.||+|+. .++.||||.++. ....+++.|++|+|+||+.+.++|
T Consensus 128 ELeWlGSGaQGAVF~Grl--~netVAVKKV~e-----lkETdIKHLRkLkH~NII~FkGVC------------------- 181 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRL--HNETVAVKKVRE-----LKETDIKHLRKLKHPNIITFKGVC------------------- 181 (904)
T ss_pred hhhhhccCcccceeeeec--cCceehhHHHhh-----hhhhhHHHHHhccCcceeeEeeee-------------------
Confidence 367899999999999987 678899996552 345678999999999999888876
Q ss_pred cCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCC
Q 013125 91 IPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKAN 169 (449)
Q Consensus 91 i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~ 169 (449)
.....+||||||| .|-|..+++. ++.++......|..+|+.||.|||.+.|||||||.-||||+ .+.
T Consensus 182 --------tqsPcyCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d 249 (904)
T KOG4721|consen 182 --------TQSPCYCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDD 249 (904)
T ss_pred --------cCCceeEEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccc
Confidence 3456789999999 8899998886 77899999999999999999999999999999999999996 678
Q ss_pred eEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHH
Q 013125 170 QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQ 249 (449)
Q Consensus 170 ~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~ 249 (449)
.|||+|||.++...+..+. -.++||..|||||+|++.+.++++|||||||+||||+||..||...... .
T Consensus 250 ~VKIsDFGTS~e~~~~STk--------MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss---A 318 (904)
T KOG4721|consen 250 VVKISDFGTSKELSDKSTK--------MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS---A 318 (904)
T ss_pred eEEeccccchHhhhhhhhh--------hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh---e
Confidence 9999999999887766442 4789999999999999999999999999999999999999999864322 2
Q ss_pred HHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 250 KYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 250 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
.+..+....+..|++.. +|+.|+-|+++||...|..||+|.+|+..|.
T Consensus 319 IIwGVGsNsL~LpvPst---cP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 319 IIWGVGSNSLHLPVPST---CPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred eEEeccCCcccccCccc---CchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 22223334444555544 4999999999999999999999999977654
No 42
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-42 Score=323.64 Aligned_cols=256 Identities=22% Similarity=0.289 Sum_probs=205.7
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----------------CchhHHHHHHHHHHHcCCCcce
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----------------KHPQLLYEAKVYKILQGGSKIR 66 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----------------~~~~~~~E~~~l~~l~~~~~~~ 66 (449)
+..-++|++++.||+|.||.|-+|++..+++.||||++.+.. ..+...+|+.+|++|.|+|+++
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 445589999999999999999999999999999999976431 1235789999999999999988
Q ss_pred eeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHH
Q 013125 67 LVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRK-FSLKTVLMLADQMIARIEY 144 (449)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~-~~~~~~~~i~~qil~~L~~ 144 (449)
++.+.- .++.+.+|||+||| .|.+...- +... ++..+++.|++.++.||+|
T Consensus 173 LiEvLD-------------------------DP~s~~~YlVley~s~G~v~w~p--~d~~els~~~Ar~ylrDvv~GLEY 225 (576)
T KOG0585|consen 173 LIEVLD-------------------------DPESDKLYLVLEYCSKGEVKWCP--PDKPELSEQQARKYLRDVVLGLEY 225 (576)
T ss_pred EEEeec-------------------------CcccCceEEEEEeccCCccccCC--CCcccccHHHHHHHHHHHHHHHHH
Confidence 876542 24678999999999 55544321 1334 8999999999999999999
Q ss_pred HHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC----CCccc
Q 013125 145 VHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE----QSRRD 220 (449)
Q Consensus 145 LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~ 220 (449)
||.+|||||||||+|+|++ ++++|||+|||.+..+........- ..-...+||+.|+|||...+.. .+++.
T Consensus 226 LH~QgiiHRDIKPsNLLl~---~~g~VKIsDFGVs~~~~~~~~~~~d--~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~ 300 (576)
T KOG0585|consen 226 LHYQGIIHRDIKPSNLLLS---SDGTVKISDFGVSNEFPQGSDEGSD--DQLSRTVGTPAFFAPELCSGGNSFSYSGFAL 300 (576)
T ss_pred HHhcCeeccccchhheEEc---CCCcEEeeccceeeecccCCccccH--HHHhhcCCCccccchHhhcCCCCccccchhh
Confidence 9999999999999999995 7899999999999876332111000 0112468999999999887632 47899
Q ss_pred hHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 221 DLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 221 DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
||||+|++||.|+.|+.||.+... .+.+.+|+...+.+|... ...+.+++||..+|.+||++|.+..+|.
T Consensus 301 DiWalGVTLYCllfG~~PF~~~~~---~~l~~KIvn~pL~fP~~p---e~~e~~kDli~~lL~KdP~~Ri~l~~ik 370 (576)
T KOG0585|consen 301 DIWALGVTLYCLLFGQLPFFDDFE---LELFDKIVNDPLEFPENP---EINEDLKDLIKRLLEKDPEQRITLPDIK 370 (576)
T ss_pred hhhhhhhhHHHhhhccCCcccchH---HHHHHHHhcCcccCCCcc---cccHHHHHHHHHHhhcChhheeehhhhe
Confidence 999999999999999999987544 467778888877777542 2357899999999999999999987773
No 43
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.1e-40 Score=321.81 Aligned_cols=262 Identities=21% Similarity=0.310 Sum_probs=198.5
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcC----------------CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCc
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVD----------------TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSK 64 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~----------------~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~ 64 (449)
+..++|++.++||+|+||.||+|.+.. ++..||+|++..... ...+.+|++++..++|+++
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCe
Confidence 557899999999999999999998642 334799999875432 2357889999999998876
Q ss_pred ceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc------------------CC
Q 013125 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR------------------RK 125 (449)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~------------------~~ 125 (449)
+.+++ +....+..|+||||+ +++|.+++.... ..
T Consensus 82 v~~~~---------------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 134 (304)
T cd05096 82 IRLLG---------------------------VCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPA 134 (304)
T ss_pred eEEEE---------------------------EEecCCceEEEEecCCCCcHHHHHHhcccccccccccccccccccccc
Confidence 65543 334556789999999 889998875421 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccc
Q 013125 126 FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARY 205 (449)
Q Consensus 126 ~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y 205 (449)
+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++....... +.......++..|
T Consensus 135 ~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y 206 (304)
T cd05096 135 ISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVG---ENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRW 206 (304)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEc---CCccEEECCCccceecccCce-----eEecCcCCCCccc
Confidence 67888999999999999999999999999999999994 778999999999986543321 1112334567889
Q ss_pred cccccccCCCCCccchHHHHHHHHHHHHh--CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhC
Q 013125 206 ASCNTHLGIEQSRRDDLESLGYVLLYFLR--GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQS 283 (449)
Q Consensus 206 ~aPE~~~~~~~s~~~DvwSlG~il~el~~--G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 283 (449)
+|||++.+..++.++|||||||++|||++ +..||.+............................+|..+.+++..||.
T Consensus 207 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 286 (304)
T cd05096 207 MAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWS 286 (304)
T ss_pred cCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHcc
Confidence 99999998899999999999999999986 6788887654332222211111111000011113457899999999999
Q ss_pred CCCCCCCCHHHHHHHHH
Q 013125 284 LTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 284 ~~p~~Rp~~~~l~~~l~ 300 (449)
.+|.+||++.+|.+.|+
T Consensus 287 ~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 287 RDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCchhCcCHHHHHHHHh
Confidence 99999999999987765
No 44
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.3e-41 Score=327.73 Aligned_cols=237 Identities=22% Similarity=0.347 Sum_probs=197.2
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
-++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+|+++++.++|++++..+.
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~----------- 85 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMC----------- 85 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEE-----------
Confidence 478999999999999999999999999999999886431 2335788999999999887665433
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
.....+..|+||||+ +++|.+.+.. ...++...+..++.||+.||+|||++||+||||||+|
T Consensus 86 ----------------~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~N 148 (329)
T PTZ00263 86 ----------------SFQDENRVYFLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPEN 148 (329)
T ss_pred ----------------EEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH
Confidence 335667899999999 8899988875 4578999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
||+ +.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 149 Ill---~~~~~~kl~Dfg~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf 215 (329)
T PTZ00263 149 LLL---DNKGHVKVTDFGFAKKVPDRT----------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPF 215 (329)
T ss_pred EEE---CCCCCEEEeeccCceEcCCCc----------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCC
Confidence 999 478899999999998654322 2457899999999999999999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
.+.... ..+..+.......| ...+..+++++..||..||.+|++
T Consensus 216 ~~~~~~---~~~~~i~~~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~ 259 (329)
T PTZ00263 216 FDDTPF---RIYEKILAGRLKFP-----NWFDGRARDLVKGLLQTDHTKRLG 259 (329)
T ss_pred CCCCHH---HHHHHHhcCCcCCC-----CCCCHHHHHHHHHHhhcCHHHcCC
Confidence 875432 33444444433332 235788999999999999999987
No 45
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.4e-41 Score=328.90 Aligned_cols=247 Identities=22% Similarity=0.327 Sum_probs=198.6
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|+++++||+|+||.||+|++..+++.||||++.... ....+.+|++++..++|++++.+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~-------------- 66 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKL-------------- 66 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccE--------------
Confidence 57999999999999999999999999999999986431 23346789999998888765544
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
..+....+..|+||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus 67 -------------~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Ni 132 (333)
T cd05600 67 -------------LYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENF 132 (333)
T ss_pred -------------EEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHE
Confidence 33445678899999999 8999998875 45789999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
|+ +.++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 133 l~---~~~~~~kL~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 199 (333)
T cd05600 133 LI---DASGHIKLTDFGLSKGIVTY----------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFS 199 (333)
T ss_pred EE---CCCCCEEEEeCcCCcccccc----------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCC
Confidence 99 47889999999999765431 235679999999999999999999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhh--cCCCHH-HhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 241 GLKAATKKQKYDKICEKK--VSTPIE-VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~--~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
+...... +..+.... ...+.. .....++.++.+++..||..+|.+||+++++.+
T Consensus 200 ~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 200 GSTPNET---WENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred CCCHHHH---HHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 7554322 22222111 111111 001245789999999999999999999887754
No 46
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.4e-40 Score=319.35 Aligned_cols=253 Identities=20% Similarity=0.251 Sum_probs=194.8
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.++|++.++||+|+||+||+|++..+++.||||++..... .....+|+.+++.++|++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~--------------- 68 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLL--------------- 68 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeE---------------
Confidence 4789999999999999999999998999999999865422 2346789999999998875544
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
..+.......|+||||++++|.+++......++...++.++.||+.||+|||++||+||||||+|||+
T Consensus 69 ------------~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill 136 (303)
T cd07869 69 ------------HDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI 136 (303)
T ss_pred ------------EEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 33345667899999999999998887666679999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++.+.+||+|||+++....... ......+|..|+|||++.+. .++.++|||||||++|||++|..||.+
T Consensus 137 ---~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 206 (303)
T cd07869 137 ---SDTGELKLADFGLARAKSVPSH-------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPG 206 (303)
T ss_pred ---CCCCCEEECCCCcceeccCCCc-------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 4788999999999975433221 11345678999999998764 589999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcCCC-------------------------HHHhhc--cChHHHHHHHHHHhCCCCCCCCCHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTP-------------------------IEVLCK--SHPAEFASYFHYCQSLTFDQRPDYGF 294 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~--~~~~~~~~l~~~~l~~~p~~Rp~~~~ 294 (449)
.... ...+..+........ ....+. ..+..+.+++..||..||.+||++++
T Consensus 207 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~ 284 (303)
T cd07869 207 MKDI--QDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQA 284 (303)
T ss_pred CccH--HHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHH
Confidence 5432 122222211110000 000011 12456788899999999999998776
Q ss_pred HHH
Q 013125 295 LKR 297 (449)
Q Consensus 295 l~~ 297 (449)
+.+
T Consensus 285 ~l~ 287 (303)
T cd07869 285 ALS 287 (303)
T ss_pred Hhc
Confidence 643
No 47
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.2e-40 Score=318.66 Aligned_cols=251 Identities=20% Similarity=0.258 Sum_probs=196.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+|+++++.++|++++....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~------------- 67 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKE------------- 67 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhh-------------
Confidence 479999999999999999999999999999998865422 335778999999999987655432
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+....+..|+||||+.+++.+.+......++...++.++.||+.||.|||+.||+||||||+||++
T Consensus 68 --------------~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill 133 (287)
T cd07848 68 --------------AFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI 133 (287)
T ss_pred --------------hEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 234567889999999666666666556679999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+.++.+||+|||++......... ......||..|+|||++.+..++.++|||||||++|||++|++||.+.
T Consensus 134 ---~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~ 204 (287)
T cd07848 134 ---SHNDVLKLCDFGFARNLSEGSNA------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGE 204 (287)
T ss_pred ---cCCCcEEEeeccCcccccccccc------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence 47789999999999875432211 112457899999999999989999999999999999999999999875
Q ss_pred hhhcHHHHHHHHHHhhcCCCH---------------------------HHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPI---------------------------EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
........+..+ ....+. .......+.++.+++..||..||++||+++++
T Consensus 205 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~ 281 (287)
T cd07848 205 SEIDQLFTIQKV---LGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQC 281 (287)
T ss_pred CHHHHHHHHHHh---hCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 543322222111 111110 01112356789999999999999999998876
Q ss_pred H
Q 013125 296 K 296 (449)
Q Consensus 296 ~ 296 (449)
.
T Consensus 282 l 282 (287)
T cd07848 282 L 282 (287)
T ss_pred h
Confidence 4
No 48
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1e-40 Score=325.03 Aligned_cols=240 Identities=22% Similarity=0.304 Sum_probs=194.7
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+|++++.||+|+||.||+|++..+++.||||++... .....+..|++++..+.|++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------------------- 61 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP------------------- 61 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCC-------------------
Confidence 589999999999999999999999999999988643 22334677888888877665
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
+++.+..+....+..|+||||+ +++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 62 -------~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nil 133 (324)
T cd05587 62 -------FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVM 133 (324)
T ss_pred -------ceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeE
Confidence 3444555556678899999999 8899888765 456899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++ .++.+||+|||++........ ......||..|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 134 l~---~~~~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (324)
T cd05587 134 LD---AEGHIKIADFGMCKENIFGGK-------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 203 (324)
T ss_pred Ec---CCCCEEEeecCcceecCCCCC-------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 94 778999999999875332211 12355789999999999999999999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
.... ..+..+.......+ ...+.++.+++..||..+|.+|++.
T Consensus 204 ~~~~---~~~~~i~~~~~~~~-----~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 204 EDED---ELFQSIMEHNVSYP-----KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCHH---HHHHHHHcCCCCCC-----CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 5432 33444444333322 3457899999999999999999975
No 49
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.8e-40 Score=315.02 Aligned_cols=254 Identities=21% Similarity=0.270 Sum_probs=195.6
Q ss_pred CceEEeeeecccCceeEEEEEEcC-CCceEEEEEecCCCC----chhHHHHHHHHHHH---cCCCcceeeEeecchhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTK----HPQLLYEAKVYKIL---QGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~-~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l---~~~~~~~~~~~~~~~~~~~ 78 (449)
++|++++.||+|+||.||+|++.. +++.||+|++..... .....+|+.+++.+ .|++++..+..+...
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~---- 76 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS---- 76 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecc----
Confidence 489999999999999999999864 468899998764322 22466788888776 477766554432110
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
........++|||++.++|.+++... ...+++..++.++.||+.||.|||++||+||||||
T Consensus 77 ------------------~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp 138 (290)
T cd07862 77 ------------------RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKP 138 (290)
T ss_pred ------------------cCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCH
Confidence 01234568999999988999988754 34589999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+|||++ .++.+||+|||+++....... .....||..|+|||++.+..++.++|||||||++|||++|.+
T Consensus 139 ~Nil~~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 207 (290)
T cd07862 139 QNILVT---SSGQIKLADFGLARIYSFQMA--------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 207 (290)
T ss_pred HHEEEc---CCCCEEEccccceEeccCCcc--------cccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCC
Confidence 999994 788999999999986543311 235678999999999999899999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhc----------------------CCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKV----------------------STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
||.+..... .+..+..... ..+.+......++.+.+++..||..||++||++.++
T Consensus 208 ~f~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 284 (290)
T cd07862 208 LFRGSSDVD---QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 284 (290)
T ss_pred CcCCCCHHH---HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHH
Confidence 998765433 2222322111 111223334567788999999999999999998876
Q ss_pred H
Q 013125 296 K 296 (449)
Q Consensus 296 ~ 296 (449)
.
T Consensus 285 l 285 (290)
T cd07862 285 L 285 (290)
T ss_pred h
Confidence 4
No 50
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7.7e-41 Score=325.75 Aligned_cols=237 Identities=22% Similarity=0.306 Sum_probs=190.8
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
+.||+|+||.||+|++..+++.||||++.... ....+.+|+++++.++|++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~-------------------- 60 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTAL-------------------- 60 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCE--------------------
Confidence 46999999999999999999999999987431 12346788999999888865543
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
..+....+..|+||||+ +++|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||+ +
T Consensus 61 -------~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~ 129 (323)
T cd05571 61 -------KYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---D 129 (323)
T ss_pred -------EEEEEcCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---C
Confidence 33445677899999999 8889888765 5679999999999999999999999999999999999999 4
Q ss_pred CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhc
Q 013125 167 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246 (449)
Q Consensus 167 ~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~ 246 (449)
.++.+||+|||+++....... .....+||+.|+|||++.+..++.++|||||||++|||++|..||.+...
T Consensus 130 ~~~~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-- 200 (323)
T cd05571 130 KDGHIKITDFGLCKEGISDGA-------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-- 200 (323)
T ss_pred CCCCEEEeeCCCCcccccCCC-------cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--
Confidence 788999999999875332211 12356799999999999999999999999999999999999999976433
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC-----CHHHH
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP-----DYGFL 295 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp-----~~~~l 295 (449)
......+.......| ..+++++.+++..||..||.+|| ++.++
T Consensus 201 -~~~~~~~~~~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l 248 (323)
T cd05571 201 -EKLFELILMEEIRFP-----RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEI 248 (323)
T ss_pred -HHHHHHHHcCCCCCC-----CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHH
Confidence 223333333333322 34578999999999999999999 55554
No 51
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=304.07 Aligned_cols=252 Identities=25% Similarity=0.307 Sum_probs=215.3
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
.+.+.|.+.+.||+|.|+.||++.+..+|+.+|+|+++.. ...+.+.+|+.|-+.|+|++++++...
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t--------- 78 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS--------- 78 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh---------
Confidence 5678999999999999999999999999999999987643 345678999999999999998776432
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
..+....|||+|++ |++|..-+.. ..-+++..+-.+.+||+++|.|+|+.||||||+||+
T Consensus 79 ------------------i~~~~~~ylvFe~m~G~dl~~eIV~-R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~ 139 (355)
T KOG0033|consen 79 ------------------IQEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPE 139 (355)
T ss_pred ------------------hcccceeEEEEecccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChh
Confidence 23556789999999 8888765554 244788899999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
|+|+...+...-+||+|||+|....... ...+.+||+.|||||++.+.+|+..+|||+.|++||-|+.|.+|
T Consensus 140 nllLASK~~~A~vKL~~FGvAi~l~~g~--------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~P 211 (355)
T KOG0033|consen 140 NLLLASKAKGAAVKLADFGLAIEVNDGE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 211 (355)
T ss_pred heeeeeccCCCceeecccceEEEeCCcc--------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCC
Confidence 9999887788899999999999887332 24588999999999999999999999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
|.+.+ ....+..|....+..+.+ .|....++.++|+.+||..||.+|.++.+.
T Consensus 212 F~~~~---~~rlye~I~~g~yd~~~~-~w~~is~~Ak~LvrrML~~dP~kRIta~EA 264 (355)
T KOG0033|consen 212 FWDED---QHRLYEQIKAGAYDYPSP-EWDTVTPEAKSLIRRMLTVNPKKRITADEA 264 (355)
T ss_pred CCCcc---HHHHHHHHhccccCCCCc-ccCcCCHHHHHHHHHHhccChhhhccHHHH
Confidence 99843 335677788888777754 456778999999999999999999987654
No 52
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3e-40 Score=312.66 Aligned_cols=256 Identities=15% Similarity=0.243 Sum_probs=201.6
Q ss_pred ccCCceEEeeeecccCceeEEEEEEc---CCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
+-..+|++.+.||+|+||.||+|.+. ..+..||+|+++..... ..+.+|+.+++.++|+++++..
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~--------- 72 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLE--------- 72 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEE---------
Confidence 45678999999999999999999875 45678999998765332 2477899999888888655543
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.+....+..|+||||+ +++|.+++......+++..++.++.||+.||+|||++|++|||||
T Consensus 73 ------------------~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dik 134 (266)
T cd05064 73 ------------------GVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLA 134 (266)
T ss_pred ------------------EEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence 3445667899999999 778888887655679999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-C
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-G 235 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G 235 (449)
|+|||+ +.++.++++|||.+......... ......++..|+|||++.+..++.++|||||||++||+++ |
T Consensus 135 p~nili---~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g 205 (266)
T cd05064 135 AHKVLV---NSDLVCKISGFRRLQEDKSEAIY------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYG 205 (266)
T ss_pred HhhEEE---cCCCcEEECCCcccccccccchh------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCC
Confidence 999999 47889999999987643221110 0113345678999999999999999999999999999775 9
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
..||.+..... ....+ ......+. ...+|..+.+++..||..+|.+||++++|.+.|..+
T Consensus 206 ~~p~~~~~~~~---~~~~~-~~~~~~~~---~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 206 ERPYWDMSGQD---VIKAV-EDGFRLPA---PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCcCcCCHHH---HHHHH-HCCCCCCC---CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 99998765432 22222 22222222 245688999999999999999999999999988754
No 53
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-40 Score=328.54 Aligned_cols=196 Identities=20% Similarity=0.203 Sum_probs=166.9
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
..++|+++++||+|+||.||+|.+..+++.||+|+.. ...+.+|+++++.|+|++++.+..
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----~~~~~~E~~il~~l~HpnIv~~~~--------------- 150 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----RGGTATEAHILRAINHPSIIQLKG--------------- 150 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----hhhhHHHHHHHHhCCCCCCCCEeE---------------
Confidence 4578999999999999999999999999999999754 235789999999999987665533
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~ 164 (449)
++......|+|+|+++++|..++.. ...++...++.++.||+.||+|||++||+||||||+|||+.
T Consensus 151 ------------~~~~~~~~~lv~e~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~- 216 (391)
T PHA03212 151 ------------TFTYNKFTCLILPRYKTDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN- 216 (391)
T ss_pred ------------EEEECCeeEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc-
Confidence 3345678899999999999888765 45689999999999999999999999999999999999994
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
..+.+||+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus 217 --~~~~vkL~DFG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 217 --HPGDVCLGDFGAACFPVDINAN------KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred --CCCCEEEEeCCccccccccccc------ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 7789999999999754322211 12356799999999999999999999999999999999999988764
No 54
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-41 Score=320.06 Aligned_cols=311 Identities=21% Similarity=0.296 Sum_probs=235.3
Q ss_pred CcccC-CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCc----ceeeEeecchh
Q 013125 2 ERIIG-VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSK----IRLVVFHVDHV 75 (449)
Q Consensus 2 ~~i~~-~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~----~~~~~~~~~~~ 75 (449)
|+.+. +||.+.++||.|.|++||+|+|..+.+.||+||.+.... .+..+.|+++|+.++.... ...+..
T Consensus 72 GD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~----- 146 (590)
T KOG1290|consen 72 GDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQ----- 146 (590)
T ss_pred cccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeee-----
Confidence 55666 999999999999999999999999999999999987543 3346889999998865441 111111
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-CCcccc
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHS-RGFLHR 153 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~-~giiHr 153 (449)
.+..|...|+++.|+|||+|++|.+|+.+|+++. +.+++..++.|++|||.||.|||. +||||.
T Consensus 147 --------------LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHT 212 (590)
T KOG1290|consen 147 --------------LLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHT 212 (590)
T ss_pred --------------eeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 2333567789999999999999999999999875 559999999999999999999997 699999
Q ss_pred CCCCCcEEeecCC-------------------------------------------------------------------
Q 013125 154 DIKPDNFLMGLGR------------------------------------------------------------------- 166 (449)
Q Consensus 154 DLkp~Nill~~~~------------------------------------------------------------------- 166 (449)
||||+|||+...+
T Consensus 213 DlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~ 292 (590)
T KOG1290|consen 213 DLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLE 292 (590)
T ss_pred CCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccc
Confidence 9999999982100
Q ss_pred --------------------------------------------------------------------------------
Q 013125 167 -------------------------------------------------------------------------------- 166 (449)
Q Consensus 167 -------------------------------------------------------------------------------- 166 (449)
T Consensus 293 ~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~ 372 (590)
T KOG1290|consen 293 GIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPG 372 (590)
T ss_pred cccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcc
Confidence
Q ss_pred ----------------CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHH
Q 013125 167 ----------------KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL 230 (449)
Q Consensus 167 ----------------~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~ 230 (449)
.+.+|||+|||.|..+...-+ .-..|..|+|||+++|..|+..+||||++|++|
T Consensus 373 ~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT----------~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~F 442 (590)
T KOG1290|consen 373 TIASNPLVNPDIPLPECDIRVKIADLGNACWVHKHFT----------EDIQTRQYRAPEVLLGSGYSTSADIWSTACMAF 442 (590)
T ss_pred ccccccccCCCCCCCccceeEEEeeccchhhhhhhhc----------hhhhhhhccCcceeecCCCCCchhHHHHHHHHH
Confidence 001478888888877655433 335688999999999999999999999999999
Q ss_pred HHHhCCCCCCCChh---hcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcC
Q 013125 231 YFLRGSLPWQGLKA---ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 307 (449)
Q Consensus 231 el~~G~~pf~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 307 (449)
||+||..+|....+ ......+..|++.....|...+..+ .--++++..-=.+.--.|..+--|.+.|.+-+.-..
T Consensus 443 ELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~G--k~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~ 520 (590)
T KOG1290|consen 443 ELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGG--KYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSE 520 (590)
T ss_pred HhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcC--cchHhhhccccceecccccCCCcHHHHHHHHhCCCH
Confidence 99999999965433 2244566667777777777665543 234566665555555556555556666655543332
Q ss_pred CCCCccccc--ccccccccccccccccCCCCccccCCC
Q 013125 308 YDFDFVFDW--TILKYQQTQKTKSQDLLPASRVTNSRV 343 (449)
Q Consensus 308 ~~~~~~~dw--~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (449)
.+..+.-|| .||+++|++|+++.+++.|||+.....
T Consensus 521 e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~ 558 (590)
T KOG1290|consen 521 EDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG 558 (590)
T ss_pred HHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence 222222233 889999999999999999999876554
No 55
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.6e-40 Score=339.34 Aligned_cols=209 Identities=22% Similarity=0.335 Sum_probs=168.5
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
..++|+++++||+|+||+||+|.+..+++.||||+++.... ......|+++++.+++.+.....
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~--------------- 191 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRF--------------- 191 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCc---------------
Confidence 35789999999999999999999999999999999865322 33467799999998876533211
Q ss_pred hcccCCCcCee-EEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNI-KWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~-~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~Nil 161 (449)
++..+ .++.....+.|+|||++|++|.+++.. ...+++..++.++.||+.||+|||+ .|||||||||+|||
T Consensus 192 ------~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NIL 264 (467)
T PTZ00284 192 ------PLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMK-HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENIL 264 (467)
T ss_pred ------ceeeeEEEEEcCCceEEEEEeccCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEE
Confidence 23333 233345568899999999999998875 4579999999999999999999998 59999999999999
Q ss_pred eecCC-------------CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHH
Q 013125 162 MGLGR-------------KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYV 228 (449)
Q Consensus 162 l~~~~-------------~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~i 228 (449)
+...+ +...+||+|||++...... ....+||..|+|||++.+..|+.++|||||||+
T Consensus 265 l~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~----------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvi 334 (467)
T PTZ00284 265 METSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS----------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCI 334 (467)
T ss_pred EecCCcccccccccccCCCCceEEECCCCccccCccc----------cccccCCccccCcHHhhcCCCCcHHHHHHHHHH
Confidence 95321 1235999999987543221 235689999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCChhh
Q 013125 229 LLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 229 l~el~~G~~pf~~~~~~ 245 (449)
+|||++|++||.+....
T Consensus 335 l~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 335 IYELYTGKLLYDTHDNL 351 (467)
T ss_pred HHHHHhCCCCCCCCChH
Confidence 99999999999876543
No 56
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-41 Score=324.73 Aligned_cols=260 Identities=21% Similarity=0.348 Sum_probs=223.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
....+.++||-|-||+||.|.|++..-.||||.++.+.. .++|+.|+.+|+.++|+|.+.++++|
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVC-------------- 332 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-------------- 332 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhh--------------
Confidence 456778999999999999999999999999999987654 55799999999999999999888776
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRK-FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~-~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
..+-.+|||+||| .|+|++++..|.+. ++.-..+.++.||..||+||..+++|||||...|+|++
T Consensus 333 -------------T~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg 399 (1157)
T KOG4278|consen 333 -------------THEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 399 (1157)
T ss_pred -------------ccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc
Confidence 3456789999999 99999999988764 56666788899999999999999999999999999996
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~ 242 (449)
++..||++||||++.+..+++..| .+..-...|.|||.+....++.++|||+||++|||+.| |..||.|.
T Consensus 400 ---EnhiVKvADFGLsRlMtgDTYTAH------AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi 470 (1157)
T KOG4278|consen 400 ---ENHIVKVADFGLSRLMTGDTYTAH------AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI 470 (1157)
T ss_pred ---ccceEEeeccchhhhhcCCceecc------cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc
Confidence 889999999999999988876543 34555788999999999999999999999999999998 99999997
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYD 309 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~ 309 (449)
.-.. +..++++.+...-+ ++||+.+.+||..||+++|.+||+|.+|-+.|+.+|....+.
T Consensus 471 dlSq----VY~LLEkgyRM~~P---eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSis 530 (1157)
T KOG4278|consen 471 DLSQ----VYGLLEKGYRMDGP---EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSIS 530 (1157)
T ss_pred cHHH----HHHHHhccccccCC---CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccccc
Confidence 5432 33344555544433 566999999999999999999999999999999998876543
No 57
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=332.19 Aligned_cols=259 Identities=27% Similarity=0.378 Sum_probs=212.5
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCC----ceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTN----EIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHV 75 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~----~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 75 (449)
..++-.+.++||+|+||+||+|.....+ ..||+|..+... ...++++|+++|+.++|+|+++++++.
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa---- 230 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA---- 230 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE----
Confidence 4456677899999999999999986432 238999877421 234589999999999999988887765
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRD 154 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrD 154 (449)
......+||||+| ||+|.++++..+..++..+...++.+.++||+|||++++||||
T Consensus 231 -----------------------~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRD 287 (474)
T KOG0194|consen 231 -----------------------VLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRD 287 (474)
T ss_pred -----------------------cCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchh
Confidence 4567889999999 9999999998777799999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCC-CCCCCccccccccccCCCCCccchHHHHHHHHHHHH
Q 013125 155 IKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233 (449)
Q Consensus 155 Lkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~ 233 (449)
|..+|+|++ .++.+||+|||+|+.... |.... ...-+.+|+|||++....|+.++|||||||++||++
T Consensus 288 IAARNcL~~---~~~~vKISDFGLs~~~~~--------~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif 356 (474)
T KOG0194|consen 288 IAARNCLYS---KKGVVKISDFGLSRAGSQ--------YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIF 356 (474)
T ss_pred HhHHHheec---CCCeEEeCccccccCCcc--------eeeccccccCcceecChhhhccCccccccchhheeeeEEeee
Confidence 999999995 667789999999875431 11112 224578999999999999999999999999999999
Q ss_pred h-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcC
Q 013125 234 R-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 307 (449)
Q Consensus 234 ~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 307 (449)
+ |..||.++..... ..+|.......+.+. ..|.++..++..||..+|++||++.++.+.|+.+.....
T Consensus 357 ~~g~~Py~g~~~~~v---~~kI~~~~~r~~~~~---~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 357 ENGAEPYPGMKNYEV---KAKIVKNGYRMPIPS---KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ccCCCCCCCCCHHHH---HHHHHhcCccCCCCC---CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 8 8999999877643 334434444444443 458999999999999999999999999999998866543
No 58
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.8e-40 Score=320.88 Aligned_cols=240 Identities=21% Similarity=0.305 Sum_probs=192.8
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+|.+++.||+|+||.||+|++..+++.||||++..... ......|..++..+.+..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------------------- 61 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPP------------------- 61 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCC-------------------
Confidence 58999999999999999999999999999999875321 123455666666654433
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
++..+..+....+..|+||||+ +++|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 62 -------~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nil 133 (323)
T cd05616 62 -------FLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVM 133 (323)
T ss_pred -------eEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeE
Confidence 3444555556778899999999 8899888765 456999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ +.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 134 l---~~~~~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~ 203 (323)
T cd05616 134 L---DSEGHIKIADFGMCKENMWDGV-------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 203 (323)
T ss_pred E---CCCCcEEEccCCCceecCCCCC-------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC
Confidence 9 4788999999999975432221 12356789999999999999999999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
.... ..+..+.......| ...+.++.+++..|+..+|.+|++.
T Consensus 204 ~~~~---~~~~~i~~~~~~~p-----~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 204 EDED---ELFQSIMEHNVAYP-----KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCHH---HHHHHHHhCCCCCC-----CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 5443 34444444443333 3457899999999999999999985
No 59
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.5e-40 Score=326.44 Aligned_cols=257 Identities=20% Similarity=0.334 Sum_probs=199.9
Q ss_pred CCceEEeeeecccCceeEEEEEEcCC-----CceEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeecchhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~-----~~~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~ 76 (449)
.++|++++.||+|+||.||+|.+... ...||||+++.... ...+.+|+++++.+ +|++++..++
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~------- 109 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLG------- 109 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEee-------
Confidence 46799999999999999999986443 35799999875432 23477899999998 7777555443
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc--------------------------------
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-------------------------------- 123 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-------------------------------- 123 (449)
++......|+||||+ +++|.+++....
T Consensus 110 --------------------~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (374)
T cd05106 110 --------------------ACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRS 169 (374)
T ss_pred --------------------EecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccc
Confidence 345667889999999 899998875421
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 124 -------------------------------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 124 -------------------------------------~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~--- 246 (374)
T cd05106 170 DSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT--- 246 (374)
T ss_pred cccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---
Confidence 2478889999999999999999999999999999999994
Q ss_pred CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChhh
Q 013125 167 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAA 245 (449)
Q Consensus 167 ~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~~ 245 (449)
+++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 247 ~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~ 321 (374)
T cd05106 247 DGRVAKICDFGLARDIMNDSNY-----VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN 321 (374)
T ss_pred CCCeEEEeeceeeeeccCCcce-----eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc
Confidence 7789999999999865433211 11123345678999999999899999999999999999997 99999875432
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~ 303 (449)
. .+..+......... ....++++.+++..||..+|.+||++.+|.+.|++++
T Consensus 322 ~---~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 322 S---KFYKMVKRGYQMSR---PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred H---HHHHHHHcccCccC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 2 22222222222211 1234789999999999999999999999999998765
No 60
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-41 Score=294.86 Aligned_cols=246 Identities=25% Similarity=0.331 Sum_probs=210.4
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
--++|.+++.||+|-||.||+|+..+++-.||+||+.+. ....++.+|++|...|+|+|+.++
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrl------------ 87 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRL------------ 87 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhh------------
Confidence 347899999999999999999999999999999986543 234467888888888888876654
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
+.++.+....||++||. .|.+...+... ..+|++.....++.|++.||.|+|.++||||||||
T Consensus 88 ---------------Y~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKp 152 (281)
T KOG0580|consen 88 ---------------YGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKP 152 (281)
T ss_pred ---------------hhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCH
Confidence 34456778899999999 77777777633 45699999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+|+|++ ..+.+||+|||-+...... ...+++||..|.+||+..+...+..+|+|++|++.||++.|.+
T Consensus 153 enlLlg---~~~~lkiAdfGwsV~~p~~---------kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~p 220 (281)
T KOG0580|consen 153 ENLLLG---SAGELKIADFGWSVHAPSN---------KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLP 220 (281)
T ss_pred HHhccC---CCCCeeccCCCceeecCCC---------CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCC
Confidence 999995 7899999999998754422 2368999999999999999999999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
||.... ..+.+.+|....+..| ...+.+.+++|.+|+..+|.+|....++.+
T Consensus 221 pFes~~---~~etYkrI~k~~~~~p-----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 221 PFESQS---HSETYKRIRKVDLKFP-----STISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred chhhhh---hHHHHHHHHHccccCC-----cccChhHHHHHHHHhccCccccccHHHHhh
Confidence 998755 5577888888888777 455789999999999999999999777654
No 61
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.4e-40 Score=323.09 Aligned_cols=238 Identities=24% Similarity=0.333 Sum_probs=194.8
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCC-ceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTN-EIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~-~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
+.-++|++.+.||+|+||.||+|.+..++ ..||+|++... .....+.+|+++++.++|++++.++
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~--------- 97 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLY--------- 97 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceE---------
Confidence 44578999999999999999999976554 68999987532 2234577899999999988755543
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.+....+..|+||||+ +++|.+++.. ...++...++.++.||+.||+|||++||+|||||
T Consensus 98 ------------------~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLk 158 (340)
T PTZ00426 98 ------------------GSFKDESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLK 158 (340)
T ss_pred ------------------EEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCC
Confidence 3345667899999999 8899998875 5579999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCC
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
|+|||+ +.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|.
T Consensus 159 p~NILl---~~~~~ikL~DFG~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~ 225 (340)
T PTZ00426 159 PENLLL---DKDGFIKMTDFGFAKVVDTRT----------YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGC 225 (340)
T ss_pred HHHEEE---CCCCCEEEecCCCCeecCCCc----------ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCC
Confidence 999999 478899999999998654221 2567899999999999988999999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp 290 (449)
.||.+.... ..+..+.......| ...+..+.+++..||..+|.+|+
T Consensus 226 ~Pf~~~~~~---~~~~~i~~~~~~~p-----~~~~~~~~~li~~~l~~dp~~R~ 271 (340)
T PTZ00426 226 PPFYANEPL---LIYQKILEGIIYFP-----KFLDNNCKHLMKKLLSHDLTKRY 271 (340)
T ss_pred CCCCCCCHH---HHHHHHhcCCCCCC-----CCCCHHHHHHHHHHcccCHHHcC
Confidence 999875432 33444444333332 34578899999999999999996
No 62
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.3e-40 Score=325.03 Aligned_cols=252 Identities=21% Similarity=0.338 Sum_probs=191.8
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++++.||+|+||+||+|++..+++.||||++.... ....+..|+.++..++|++++..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~-------------- 66 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKM-------------- 66 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceE--------------
Confidence 47999999999999999999999999999999986431 12346778888888887765443
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.....+....|+||||+ |++|.+++.. ...++...++.++.||+.||+|||++||+||||||+||
T Consensus 67 -------------~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NI 132 (363)
T cd05628 67 -------------FYSFQDKLNLYLIMEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNL 132 (363)
T ss_pred -------------EEEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHe
Confidence 34445677899999999 8899998875 46799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCc-------ccc---------------------ccCCCCCCCCcccccccccc
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNR-------HIP---------------------YRENKNLTGTARYASCNTHL 212 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~-------~~~---------------------~~~~~~~~gt~~y~aPE~~~ 212 (449)
|+ +.++.+||+|||+++......... ..| .......+||+.|+|||++.
T Consensus 133 Li---~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~ 209 (363)
T cd05628 133 LL---DSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM 209 (363)
T ss_pred EE---CCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc
Confidence 99 478899999999997653221100 000 00012457999999999999
Q ss_pred CCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhh--cCCCHHHhhccChHHHHHHHHHHhCCCCC---
Q 013125 213 GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK--VSTPIEVLCKSHPAEFASYFHYCQSLTFD--- 287 (449)
Q Consensus 213 ~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~l~~~~l~~~p~--- 287 (449)
+..++.++|||||||++|||++|+.||.+.... ..+..+.... ...|.. ...++++.+++..++. ++.
T Consensus 210 ~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~---~~~~~i~~~~~~~~~p~~---~~~s~~~~~li~~l~~-~~~~r~ 282 (363)
T cd05628 210 QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ---ETYKKVMNWKETLIFPPE---VPISEKAKDLILRFCC-EWEHRI 282 (363)
T ss_pred CCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHHcCcCcccCCCc---CCCCHHHHHHHHHHcC-ChhhcC
Confidence 999999999999999999999999999875433 3334443322 112211 1246788888887654 444
Q ss_pred CCCCHHHHH
Q 013125 288 QRPDYGFLK 296 (449)
Q Consensus 288 ~Rp~~~~l~ 296 (449)
.||++++|.
T Consensus 283 ~r~~~~ei~ 291 (363)
T cd05628 283 GAPGVEEIK 291 (363)
T ss_pred CCCCHHHHh
Confidence 457777663
No 63
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.9e-40 Score=319.56 Aligned_cols=273 Identities=20% Similarity=0.296 Sum_probs=209.2
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
++..++|++.++||+|+||.||+|.+..++..||+|++..... ...+.+|+++++.++|++++..++
T Consensus 1 ~l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~---------- 70 (333)
T cd06650 1 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG---------- 70 (333)
T ss_pred CcchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeE----------
Confidence 3567899999999999999999999999999999998765422 235789999999999887655443
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKP 157 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~-giiHrDLkp 157 (449)
++...+..|+||||+ +++|.+++.. ...++...+..++.|++.||.|||+. +|+||||||
T Consensus 71 -----------------~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp 132 (333)
T cd06650 71 -----------------AFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 132 (333)
T ss_pred -----------------EEEECCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCh
Confidence 345567899999999 8899998875 45689999999999999999999985 799999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+|||+. ..+.+||+|||++....... .....|+..|+|||++.+..++.++|||||||++|||++|+.
T Consensus 133 ~Nili~---~~~~~kL~Dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~ 200 (333)
T cd06650 133 SNILVN---SRGEIKLCDFGVSGQLIDSM---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRY 200 (333)
T ss_pred hhEEEc---CCCCEEEeeCCcchhhhhhc---------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 999994 67889999999987654322 134578999999999999889999999999999999999999
Q ss_pred CCCCChhhcHHHHHH-------------------------------------HHHHhhcCCCHHHhh-ccChHHHHHHHH
Q 013125 238 PWQGLKAATKKQKYD-------------------------------------KICEKKVSTPIEVLC-KSHPAEFASYFH 279 (449)
Q Consensus 238 pf~~~~~~~~~~~~~-------------------------------------~i~~~~~~~~~~~~~-~~~~~~~~~l~~ 279 (449)
||...........+. .+.........+... ...+.++.+|+.
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 280 (333)
T cd06650 201 PIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVN 280 (333)
T ss_pred CCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHH
Confidence 997643321111000 000000000001111 124678999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccccc
Q 013125 280 YCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWT 317 (449)
Q Consensus 280 ~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~dw~ 317 (449)
+||..||.+||++.++.. ..+++....+..+...|.
T Consensus 281 ~~L~~~P~~Rpt~~ell~--h~~~~~~~~~~~~~~~~~ 316 (333)
T cd06650 281 KCLIKNPAERADLKQLMV--HAFIKRSEAEEVDFAGWL 316 (333)
T ss_pred HhccCCcccCcCHHHHhh--CHHHhcCccccccHHHHH
Confidence 999999999999998843 666766555555555663
No 64
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=317.94 Aligned_cols=248 Identities=25% Similarity=0.336 Sum_probs=217.6
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
|.+=|.+.+.||+|.|+.|-+|++.-||++|||||+.+..- ...++.|+++|+..+|+|+++++.+.
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi--------- 86 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI--------- 86 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh---------
Confidence 45789999999999999999999999999999999987532 23589999999999999988876542
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
..+...|||+|+- +|+|.|++.+....+.+..+++|+.||+.||.|+|...+|||||||+|
T Consensus 87 ------------------DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPEN 148 (864)
T KOG4717|consen 87 ------------------DTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPEN 148 (864)
T ss_pred ------------------cccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcce
Confidence 4567889999999 889999999888889999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCC-ccchHHHHHHHHHHHHhCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS-RRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~~DvwSlG~il~el~~G~~p 238 (449)
+++- .+-|.|||.|||++-.+.... .-.+.+|+..|-|||+++|..|+ +++||||||+|||-|++|++|
T Consensus 149 VVFF--EKlGlVKLTDFGFSNkf~PG~--------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~P 218 (864)
T KOG4717|consen 149 VVFF--EKLGLVKLTDFGFSNKFQPGK--------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPP 218 (864)
T ss_pred eEEe--eecCceEeeeccccccCCCcc--------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCc
Confidence 9886 578999999999997665433 23578999999999999999984 689999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|+..++. +.+-.|+.+++..|... +.+.++||..||..||.+|.+.++|..
T Consensus 219 FqeANDS---ETLTmImDCKYtvPshv-----S~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 219 FQEANDS---ETLTMIMDCKYTVPSHV-----SKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred cccccch---hhhhhhhcccccCchhh-----hHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 9976554 45566788999988665 679999999999999999999988754
No 65
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.6e-40 Score=320.55 Aligned_cols=239 Identities=23% Similarity=0.331 Sum_probs=192.1
Q ss_pred ecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 15 IGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 15 LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
||+|+||.||+|++..+++.||+|++... .....+.+|+.+++.++|++++..
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~---------------------- 58 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPL---------------------- 58 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEece----------------------
Confidence 79999999999999999999999987642 122346789999999988875544
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
..+....+..|+||||+ +++|.+++.. ...++...++.++.||+.||.|||++||+||||||+|||+ +.+
T Consensus 59 -----~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~ 129 (312)
T cd05585 59 -----KFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQ 129 (312)
T ss_pred -----eeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCC
Confidence 33335667899999999 8999988875 5579999999999999999999999999999999999999 478
Q ss_pred CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHH
Q 013125 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKK 248 (449)
Q Consensus 169 ~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~ 248 (449)
+.++|+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+....
T Consensus 130 ~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~--- 199 (312)
T cd05585 130 GHIALCDFGLCKLNMKDDD-------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN--- 199 (312)
T ss_pred CcEEEEECcccccCccCCC-------ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH---
Confidence 8999999999875432221 123567999999999999999999999999999999999999999875432
Q ss_pred HHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 249 QKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
+.+..+.......+ ...++++.+++..||..||.+||++..+.+.+
T Consensus 200 ~~~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 200 EMYRKILQEPLRFP-----DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHHHcCCCCCC-----CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 33444443333322 34578999999999999999999765444443
No 66
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-42 Score=319.17 Aligned_cols=303 Identities=19% Similarity=0.272 Sum_probs=226.7
Q ss_pred CcccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 2 ~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
++++.+||.++..+|+|.||.|-.+.|..++..|||||++.-.. .+...-|+++++++.+.......
T Consensus 84 gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~------------ 151 (415)
T KOG0671|consen 84 GDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKF------------ 151 (415)
T ss_pred ccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCce------------
Confidence 67889999999999999999999999999999999999886543 44567899999998544322111
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
.+..+..++...++.|||+|++|.++.++++.. -.+|+..+++.+++||+.+++|||+.+++|.||||+|
T Consensus 152 ---------rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPEN 222 (415)
T KOG0671|consen 152 ---------RCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPEN 222 (415)
T ss_pred ---------EEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChhe
Confidence 122334455677899999999999999999863 3569999999999999999999999999999999999
Q ss_pred EEeecCC-----------------CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchH
Q 013125 160 FLMGLGR-----------------KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDL 222 (449)
Q Consensus 160 ill~~~~-----------------~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv 222 (449)
||+...+ +...|+|+|||.|+.-.... ...+.|..|+|||++++..|+..+||
T Consensus 223 ILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----------s~iVsTRHYRAPEViLgLGwS~pCDv 292 (415)
T KOG0671|consen 223 ILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----------STIVSTRHYRAPEVILGLGWSQPCDV 292 (415)
T ss_pred EEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc----------ceeeeccccCCchheeccCcCCccCc
Confidence 9984211 24468999999998665544 36788999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHH-HHhCCC--CCCC--CCHHHHHH
Q 013125 223 ESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFH-YCQSLT--FDQR--PDYGFLKR 297 (449)
Q Consensus 223 wSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~--p~~R--p~~~~l~~ 297 (449)
||+||||+|+.+|...|++..+.+...+++.|++ +.|...+.+.. ..+++. .++.++ ...| -...+...
T Consensus 293 WSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG---p~P~~mi~r~~---~~Kyf~~~rldw~e~~~~~~~k~v~~~ck 366 (415)
T KOG0671|consen 293 WSIGCILVELYTGETLFQTHENLEHLAMMERILG---PIPSRMIKKTR---KEKYFRRGRLDWPEVSSKGKSKYVFEPCK 366 (415)
T ss_pred eeeeeEEEEeeccceecccCCcHHHHHHHHHhhC---CCcHHHhhhhh---hHhhhhcccccCccccccccchhhhcCCc
Confidence 9999999999999999999887766666666544 44444333211 222222 223221 1112 11111222
Q ss_pred HHHHHHHhcCCCCCccccc--ccccccccccccccccCCCCccccC
Q 013125 298 LFHDLFSREGYDFDFVFDW--TILKYQQTQKTKSQDLLPASRVTNS 341 (449)
Q Consensus 298 ~l~~~~~~~~~~~~~~~dw--~~l~~~~~~~~~~~~~~~~~~~~~~ 341 (449)
.|+..+...+.+....||- .|+.++|++|.++.+++.|++|...
T Consensus 367 pl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 367 PLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred cHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 4445555555555555554 7899999999999999999998654
No 67
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.7e-39 Score=309.41 Aligned_cols=256 Identities=20% Similarity=0.244 Sum_probs=195.8
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHH---cCCCcceeeEeecchhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKIL---QGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l---~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+|++.+.||+|+||+||+|++..+++.||+|++..... .....+|+++++.+ .|++++..+......
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~------ 74 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATS------ 74 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccc------
Confidence 69999999999999999999999999999998765322 22466788888776 466655554322110
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
........++|||++.++|.+++.... ..++...++.++.||+.||+|||++||+||||||+|
T Consensus 75 ----------------~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~N 138 (288)
T cd07863 75 ----------------RTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN 138 (288)
T ss_pred ----------------cCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 012345679999999889988887543 458999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
||+ +.++.+||+|||+++....... .....+|..|+|||++.+..++.++|||||||++|||++|.+||
T Consensus 139 ili---~~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f 207 (288)
T cd07863 139 ILV---TSGGQVKLADFGLARIYSCQMA--------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 207 (288)
T ss_pred EEE---CCCCCEEECccCccccccCccc--------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCc
Confidence 999 4788999999999976543221 12456789999999999989999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHh-------------------hcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 240 QGLKAATKKQKYDKICEK-------------------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~-------------------~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
.+.........+...... ....+........+..+.+++..|+..||.+||++.++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 208 CGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 875543322222221110 001112233345678899999999999999999988764
No 68
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.5e-39 Score=316.26 Aligned_cols=254 Identities=18% Similarity=0.289 Sum_probs=198.5
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+..++|+++++||+|+||.||+|++..++..||+|++..... ...+.+|+++++.++|++++..+.
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~----------- 70 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG----------- 70 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEE-----------
Confidence 557899999999999999999999999999999998875422 235789999999999887655543
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCC
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPD 158 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~-giiHrDLkp~ 158 (449)
+....+..++||||+ +++|.+++.. ...++...+..++.|++.||.|||++ +|+||||||+
T Consensus 71 ----------------~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~ 133 (331)
T cd06649 71 ----------------AFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPS 133 (331)
T ss_pred ----------------EEEECCEEEEEeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChh
Confidence 334567889999999 8899998875 45689999999999999999999986 6999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
|||+. .++.++|+|||++....... .....||..|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 134 Nil~~---~~~~~kl~Dfg~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p 201 (331)
T cd06649 134 NILVN---SRGEIKLCDFGVSGQLIDSM---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP 201 (331)
T ss_pred hEEEc---CCCcEEEccCcccccccccc---------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence 99994 77899999999987654322 1345789999999999999999999999999999999999999
Q ss_pred CCCChhhcHHHHHH---------------------------------------HHHHhhcCCCHHH-hhccChHHHHHHH
Q 013125 239 WQGLKAATKKQKYD---------------------------------------KICEKKVSTPIEV-LCKSHPAEFASYF 278 (449)
Q Consensus 239 f~~~~~~~~~~~~~---------------------------------------~i~~~~~~~~~~~-~~~~~~~~~~~l~ 278 (449)
|...........+. ...........+. .....++++.+|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 281 (331)
T cd06649 202 IPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFV 281 (331)
T ss_pred CCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHH
Confidence 97543321111000 0000000000000 0123567899999
Q ss_pred HHHhCCCCCCCCCHHHHHH
Q 013125 279 HYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 279 ~~~l~~~p~~Rp~~~~l~~ 297 (449)
.+||..||++||++++|.+
T Consensus 282 ~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 282 NKCLIKNPAERADLKMLMN 300 (331)
T ss_pred HHHccCCcccCCCHHHHhc
Confidence 9999999999999998754
No 69
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.3e-39 Score=317.24 Aligned_cols=238 Identities=22% Similarity=0.325 Sum_probs=189.3
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHH---cCCCcceeeEeecchhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKIL---QGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l---~~~~~~~~~~~~~~~~~~~~~ 80 (449)
|++++.||+|+||.||+|.+..+++.||||+++... ....+.+|++++..+ +|++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~----------------- 63 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPF----------------- 63 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCC-----------------
Confidence 789999999999999999999999999999986431 123456676666543 3444
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
+..+..+....+..|+||||+ +++|...+. ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 64 ----------i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~N 131 (324)
T cd05589 64 ----------LVNLFACFQTEDHVCFVMEYAAGGDLMMHIH--TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDN 131 (324)
T ss_pred ----------hhceeeEEEcCCEEEEEEcCCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHH
Confidence 444555556778899999999 888877765 4579999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
||+ +.++.+||+|||+++....... ......|++.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 132 ill---~~~~~~kL~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf 201 (324)
T cd05589 132 LLL---DTEGFVKIADFGLCKEGMGFGD-------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPF 201 (324)
T ss_pred eEE---CCCCcEEeCcccCCccCCCCCC-------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCC
Confidence 999 4788999999999875332211 123567999999999999999999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
.+.... ..+..+.......| ..++.++.+++..||..||.+||+..
T Consensus 202 ~~~~~~---~~~~~i~~~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 202 PGDDEE---EVFDSIVNDEVRYP-----RFLSREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred CCCCHH---HHHHHHHhCCCCCC-----CCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 875433 23333433333222 34578999999999999999999643
No 70
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.2e-39 Score=317.22 Aligned_cols=240 Identities=22% Similarity=0.310 Sum_probs=193.8
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+|.+.+.||+|+||+||+|++..+++.||||++... .....+..|+.++..+.|.+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------------------- 61 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP------------------- 61 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCC-------------------
Confidence 478999999999999999999999999999988643 11234667888887776655
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
++..+..+....+..|+||||+ +++|.+++.. ...+++.+++.++.||+.||+|||++||+||||||+|||
T Consensus 62 -------~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nil 133 (323)
T cd05615 62 -------FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVM 133 (323)
T ss_pred -------chhheeeEEecCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeE
Confidence 3444444556677899999999 8899888765 456999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ +.++.+||+|||+++....... ......||..|+|||++.+..++.++|||||||++|||++|..||.+
T Consensus 134 l---~~~~~ikL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (323)
T cd05615 134 L---DSEGHIKIADFGMCKEHMVDGV-------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 203 (323)
T ss_pred E---CCCCCEEEeccccccccCCCCc-------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC
Confidence 9 4788999999999875432221 12356789999999999998999999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
.... ..+..+.......| ...+.++.+++..||..+|.+|++.
T Consensus 204 ~~~~---~~~~~i~~~~~~~p-----~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 204 EDED---ELFQSIMEHNVSYP-----KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCHH---HHHHHHHhCCCCCC-----ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 5432 34444444443333 3457889999999999999999985
No 71
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.7e-40 Score=325.61 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=193.3
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++++.||+|+||+||+|++..+++.||||++.... ....+.+|+++++.++|++++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~--------------- 65 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVK--------------- 65 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcc---------------
Confidence 47999999999999999999999999999999986431 1234677999999988876544
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
++.++...+..|+||||+ +++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+||
T Consensus 66 ------------~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NI 132 (364)
T cd05599 66 ------------LYYSFQDENYLYLIMEYLPGGDMMTLLMK-KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNL 132 (364)
T ss_pred ------------eEEEEEcCCeEEEEECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHe
Confidence 344456778899999999 8899998875 45799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccc-----------------c---------cc-----CCCCCCCCccccccc
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHI-----------------P---------YR-----ENKNLTGTARYASCN 209 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~-----------------~---------~~-----~~~~~~gt~~y~aPE 209 (449)
|+ +.++.++|+|||+++.+......... + +. .....+||+.|+|||
T Consensus 133 l~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 209 (364)
T cd05599 133 LL---DAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPE 209 (364)
T ss_pred EE---CCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHH
Confidence 99 47889999999999765432110000 0 00 011357999999999
Q ss_pred cccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCC
Q 013125 210 THLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQR 289 (449)
Q Consensus 210 ~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R 289 (449)
++.+..++.++|||||||++|||++|..||.+.... +.+..+.........+. ...+++++.+++..|+. +|.+|
T Consensus 210 ~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~---~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~ll~-~p~~R 284 (364)
T cd05599 210 VFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ---ETYRKIINWKETLQFPD-EVPLSPEAKDLIKRLCC-EAERR 284 (364)
T ss_pred HHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHH---HHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-CHhhc
Confidence 999999999999999999999999999999875543 23333332221111111 12457889999999996 89999
Q ss_pred CC
Q 013125 290 PD 291 (449)
Q Consensus 290 p~ 291 (449)
++
T Consensus 285 ~~ 286 (364)
T cd05599 285 LG 286 (364)
T ss_pred CC
Confidence 98
No 72
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.2e-39 Score=313.52 Aligned_cols=254 Identities=21% Similarity=0.271 Sum_probs=196.8
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.++||+|+||.||+|++..+++.||+|+++... ....+.+|+++++.++|++++....
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~-------------- 71 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD-------------- 71 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEE--------------
Confidence 68999999999999999999999999999999876432 2235678999999999887655433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
+....+..|+||||+.++|.+.+...+..++...++.++.||+.||+|||++||+||||||+|||+
T Consensus 72 -------------~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill- 137 (309)
T cd07872 72 -------------IVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI- 137 (309)
T ss_pred -------------EEeeCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE-
Confidence 335567889999999889998887766778999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+..+.+||+|||+++........ .....+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+.
T Consensus 138 --~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 208 (309)
T cd07872 138 --NERGELKLADFGLARAKSVPTKT-------YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGS 208 (309)
T ss_pred --CCCCCEEECccccceecCCCccc-------cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 47789999999999764433211 123467899999998875 45899999999999999999999999876
Q ss_pred hhhcHHHHHHHHHHhhcC----------------------CCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVS----------------------TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~----------------------~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
...+....+......... .+........++++.+++..||..||.+||++.++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 209 TVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred ChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 544333222221110000 0001112235677888999999999999998877644
No 73
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.4e-40 Score=318.42 Aligned_cols=232 Identities=23% Similarity=0.323 Sum_probs=186.9
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
+.||+|+||.||+|++..+++.||+|++.... ....+.+|+++++.++|++++.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~-------------------- 60 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-------------------- 60 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcce--------------------
Confidence 47999999999999999999999999886431 22345678999999988865543
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
..++...+..|+||||+ +++|..++.. ...+++..++.++.||+.||+|||++||+||||||+|||+ +
T Consensus 61 -------~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~ 129 (323)
T cd05595 61 -------KYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---D 129 (323)
T ss_pred -------eeEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---c
Confidence 33345667899999999 8888877764 5579999999999999999999999999999999999999 4
Q ss_pred CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhc
Q 013125 167 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246 (449)
Q Consensus 167 ~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~ 246 (449)
.++.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 130 ~~~~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~- 201 (323)
T cd05595 130 KDGHIKITDFGLCKEGISDGA-------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE- 201 (323)
T ss_pred CCCCEEecccHHhccccCCCC-------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-
Confidence 788999999999875332221 113467899999999999999999999999999999999999999865432
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp 290 (449)
..+..+.......| ..+++++.+++..||..||.+|+
T Consensus 202 --~~~~~~~~~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~ 238 (323)
T cd05595 202 --RLFELILMEEIRFP-----RTLSPEAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred --HHHHHHhcCCCCCC-----CCCCHHHHHHHHHHccCCHHHhC
Confidence 23333333333333 34578999999999999999998
No 74
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.2e-38 Score=335.54 Aligned_cols=256 Identities=22% Similarity=0.316 Sum_probs=199.3
Q ss_pred CcccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 2 ~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
+.+.-++|+++++||.|+||+||+|++..+++.||+|++..... ...+..|+.+++.|+|++++.++...
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f------ 81 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRF------ 81 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE------
Confidence 44566899999999999999999999999999999998865322 23578899999999999877665432
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-----
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSR----- 148 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~----- 148 (449)
+......+||||||+ +++|.+++... ...+++..++.|+.||+.||.|||+.
T Consensus 82 -------------------~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~ 142 (1021)
T PTZ00266 82 -------------------LNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPN 142 (1021)
T ss_pred -------------------EecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 123446789999999 88999988753 35699999999999999999999984
Q ss_pred --CccccCCCCCcEEeecC--------------CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc
Q 013125 149 --GFLHRDIKPDNFLMGLG--------------RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL 212 (449)
Q Consensus 149 --giiHrDLkp~Nill~~~--------------~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 212 (449)
+||||||||+||||..+ +....+||+|||++........ .....||+.|+|||++.
T Consensus 143 ~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--------~~s~vGTp~YmAPEvL~ 214 (1021)
T PTZ00266 143 GERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM--------AHSCVGTPYYWSPELLL 214 (1021)
T ss_pred cCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc--------ccccCCCccccCHHHHh
Confidence 49999999999999531 1234599999999976543321 13557899999999986
Q ss_pred C--CCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC
Q 013125 213 G--IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290 (449)
Q Consensus 213 ~--~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp 290 (449)
+ ..++.++||||||||||||++|..||....... ..+ ..+......+ ....+.++.+||..||..+|.+||
T Consensus 215 ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~--qli-~~lk~~p~lp----i~~~S~eL~dLI~~~L~~dPeeRP 287 (1021)
T PTZ00266 215 HETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFS--QLI-SELKRGPDLP----IKGKSKELNILIKNLLNLSAKERP 287 (1021)
T ss_pred ccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH--HHH-HHHhcCCCCC----cCCCCHHHHHHHHHHhcCChhHCc
Confidence 5 348899999999999999999999997643321 222 2222221211 134578999999999999999999
Q ss_pred CHHHHHH
Q 013125 291 DYGFLKR 297 (449)
Q Consensus 291 ~~~~l~~ 297 (449)
++.++..
T Consensus 288 Sa~QlL~ 294 (1021)
T PTZ00266 288 SALQCLG 294 (1021)
T ss_pred CHHHHhc
Confidence 9988754
No 75
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-41 Score=294.48 Aligned_cols=271 Identities=20% Similarity=0.228 Sum_probs=209.6
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
.|-++||+|.++||+|||+-||+++...+++.+|+|.+.... ..+..++|++..+++++++.++.+.......
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~----- 91 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREE----- 91 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhh-----
Confidence 366899999999999999999999999999999999766443 3456899999999999998776644322110
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccC
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRG--FLHRD 154 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~g--iiHrD 154 (449)
.......||++.|+ .|+|.+.+..+ +..+++.+++.|+.+|+.||++||+.. +.|||
T Consensus 92 -----------------~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~D 154 (302)
T KOG2345|consen 92 -----------------KDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRD 154 (302)
T ss_pred -----------------ccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccC
Confidence 11335679999999 89999998755 346899999999999999999999998 99999
Q ss_pred CCCCcEEeecCCCCCeEEEEeecceeeecCCCCCc--cccccCCCCCCCCcccccccccc---CCCCCccchHHHHHHHH
Q 013125 155 IKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR--HIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVL 229 (449)
Q Consensus 155 Lkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlG~il 229 (449)
|||.|||++ +.+.++|.|||.+....-.-.+. ....+.+..-..|..|+|||.+. +...++++|||||||+|
T Consensus 155 iKP~NILls---~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtL 231 (302)
T KOG2345|consen 155 IKPANILLS---DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTL 231 (302)
T ss_pred CCcceeEec---CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHH
Confidence 999999996 68999999999987654322211 11222334556789999999876 45679999999999999
Q ss_pred HHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 230 LYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 230 ~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
|+|++|..||..... ........++...+.+|... .+++.+.+++..|++.||.+||+..+|...+.++
T Consensus 232 Ya~mf~~sPfe~~~~-~GgSlaLAv~n~q~s~P~~~---~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 232 YAMMFGESPFERIYQ-QGGSLALAVQNAQISIPNSS---RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred HHHHHcCCcchHHhh-cCCeEEEeeeccccccCCCC---CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 999999999964322 11111112333444555332 2688999999999999999999999998877654
No 76
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.3e-39 Score=323.33 Aligned_cols=256 Identities=20% Similarity=0.323 Sum_probs=198.4
Q ss_pred CCceEEeeeecccCceeEEEEEE-----cCCCceEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeecchhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASH-----VDTNEIVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~ 76 (449)
.++|++.++||+|+||.||+|++ ..++..||||+++.... ...+.+|+++++.+ +|++++..+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~-------- 105 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLL-------- 105 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeee--------
Confidence 45899999999999999999975 34567899999875422 33578899999999 777655543
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc--------------------------------
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-------------------------------- 123 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-------------------------------- 123 (449)
.++..+...++||||+ +|+|.+++....
T Consensus 106 -------------------~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (375)
T cd05104 106 -------------------GACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLN 166 (375)
T ss_pred -------------------eeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhh
Confidence 3445667889999999 899988886421
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 124 ------------------------------------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 124 ------------------------------------------~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
..+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil 246 (375)
T cd05104 167 EYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNIL 246 (375)
T ss_pred hhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEE
Confidence 14678889999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQ 240 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~ 240 (449)
++ +.+.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 247 l~---~~~~~kl~DfG~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~ 318 (375)
T cd05104 247 LT---HGRITKICDFGLARDIRNDSNY-----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYP 318 (375)
T ss_pred EE---CCCcEEEecCccceeccCcccc-----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 94 6788999999999866443211 11223445678999999999999999999999999999998 899998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
+..... .+.+.......... ....+.++.+++..||..||++||++.+|.+.|++.
T Consensus 319 ~~~~~~---~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 319 GMPVDS---KFYKMIKEGYRMLS---PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCchH---HHHHHHHhCccCCC---CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 754322 11222222222111 123478999999999999999999999999988753
No 77
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.3e-40 Score=325.97 Aligned_cols=253 Identities=24% Similarity=0.365 Sum_probs=199.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++++.||+|+||+||+|++..+++.||||++... .....+..|++++..++|++++..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~-------------- 66 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKL-------------- 66 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccch--------------
Confidence 5799999999999999999999999999999998643 223346789999999888765543
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.....++++.|+||||+ +++|.+++... ..++...++.++.||+.||+|||++||+||||||+||
T Consensus 67 -------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NI 132 (350)
T cd05573 67 -------------YYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNI 132 (350)
T ss_pred -------------hhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHe
Confidence 33345677899999999 88999998763 6799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCc----------------------cccccCCCCCCCCccccccccccCCCCCc
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNR----------------------HIPYRENKNLTGTARYASCNTHLGIEQSR 218 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~----------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 218 (449)
|+ +.++.+||+|||++.......... ...........||+.|+|||++.+..++.
T Consensus 133 ll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 209 (350)
T cd05573 133 LI---DADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGL 209 (350)
T ss_pred EE---CCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCC
Confidence 99 478899999999998655433000 00001123567999999999999999999
Q ss_pred cchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHH--hhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC-HHHH
Q 013125 219 RDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE--KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD-YGFL 295 (449)
Q Consensus 219 ~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~-~~~l 295 (449)
++|||||||++|||++|+.||.+.... .....+.. .....|.. ..+++++.+++..|+. +|.+|++ ++++
T Consensus 210 ~~DiwSlG~il~ell~g~~Pf~~~~~~---~~~~~i~~~~~~~~~p~~---~~~~~~~~~li~~ll~-dp~~R~~s~~~l 282 (350)
T cd05573 210 ECDWWSLGVILYEMLYGFPPFYSDTLQ---ETYNKIINWKESLRFPPD---PPVSPEAIDLICRLLC-DPEDRLGSFEEI 282 (350)
T ss_pred ceeeEecchhhhhhccCCCCCCCCCHH---HHHHHHhccCCcccCCCC---CCCCHHHHHHHHHHcc-ChhhcCCCHHHH
Confidence 999999999999999999999876533 23333333 12222211 2257899999999997 9999999 8877
Q ss_pred HH
Q 013125 296 KR 297 (449)
Q Consensus 296 ~~ 297 (449)
.+
T Consensus 283 l~ 284 (350)
T cd05573 283 KS 284 (350)
T ss_pred hc
Confidence 44
No 78
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.7e-39 Score=310.62 Aligned_cols=242 Identities=19% Similarity=0.268 Sum_probs=192.2
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+|+.+++.++|++++...
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~-------------- 66 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA-------------- 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeee--------------
Confidence 5899999999999999999999899999999876432 123467899999999988755443
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
..+..++..|+||||+ +++|.+++... ...+++..+..++.|++.||+|||+.||+||||||+||
T Consensus 67 -------------~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Ni 133 (285)
T cd05605 67 -------------YAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENI 133 (285)
T ss_pred -------------eeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHE
Confidence 3335567899999999 88998877543 34699999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
++ ++.+.++|+|||++........ .....|+..|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 134 l~---~~~~~~~l~Dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~ 202 (285)
T cd05605 134 LL---DDYGHIRISDLGLAVEIPEGET--------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFR 202 (285)
T ss_pred EE---CCCCCEEEeeCCCceecCCCCc--------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCC
Confidence 99 4778999999999976543221 124578999999999999899999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
+.........+....... ........+..+.+++..||..||.+||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~P~~R~~ 249 (285)
T cd05605 203 QRKEKVKREEVERRVKED----QEEYSEKFSEAARSICRQLLTKDPGFRLG 249 (285)
T ss_pred CCchhhHHHHHHHHhhhc----ccccCcccCHHHHHHHHHHccCCHHHhcC
Confidence 754432222222211111 11122446789999999999999999993
No 79
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.6e-40 Score=319.31 Aligned_cols=244 Identities=22% Similarity=0.331 Sum_probs=188.8
Q ss_pred ceEEeeeecccCceeEEEEEEc---CCCceEEEEEecCCC------CchhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGT------KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAvKv~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
+|+++++||+|+||.||+|++. .+++.||+|++.... ....+..|+++++.+++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--------------- 65 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSP--------------- 65 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCC---------------
Confidence 5899999999999999999874 478899999876421 1234667888888885332
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
++..+..+....+..++||||+ +++|.+++.. ...+++..++.++.||+.||+|||++||+||||||
T Consensus 66 -----------~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp 133 (332)
T cd05614 66 -----------FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKL 133 (332)
T ss_pred -----------CcccEEEEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCH
Confidence 3444555556778899999999 8899888765 56799999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~ 236 (449)
+|||+ +.++.+||+|||+++.+....... .....||..|+|||++.+.. ++.++|||||||++|||++|.
T Consensus 134 ~Nili---~~~~~~kl~DfG~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~ 204 (332)
T cd05614 134 ENILL---DSEGHVVLTDFGLSKEFLSEEKER------TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGA 204 (332)
T ss_pred HHeEE---CCCCCEEEeeCcCCccccccCCCc------cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCC
Confidence 99999 477899999999998654332211 12467999999999998754 789999999999999999999
Q ss_pred CCCCCChhhcHHHHH-HHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 237 LPWQGLKAATKKQKY-DKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
.||...........+ ..+...... .....+..+.+++..||..||++||+.
T Consensus 205 ~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~dp~~R~~~ 256 (332)
T cd05614 205 SPFTLEGERNTQSEVSRRILKCDPP-----FPSFIGPEAQDLLHKLLRKDPKKRLGA 256 (332)
T ss_pred CCCCCCCCCCCHHHHHHHHhcCCCC-----CCCCCCHHHHHHHHHHcCCCHHHcCCC
Confidence 999754332222222 222222111 123457899999999999999999953
No 80
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=317.69 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=212.6
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHc-CCCcceeeEeecchhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~ 78 (449)
+...|++.+.||.|.||.||+|+++.||+.+|+|++.+... .....+|+++|+.+. |++++.+.
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~---------- 102 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLK---------- 102 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEE----------
Confidence 55789999999999999999999999999999999876532 246899999999998 77655543
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
.........++|||++ ||.|.+.+... .+++..+..++.|++.+++|||+.||+||||||
T Consensus 103 -----------------~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKp 163 (382)
T KOG0032|consen 103 -----------------DAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKP 163 (382)
T ss_pred -----------------EEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCH
Confidence 3446667899999999 89999998865 399999999999999999999999999999999
Q ss_pred CcEEeecCCC-CCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCC
Q 013125 158 DNFLMGLGRK-ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 158 ~Nill~~~~~-~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
+|+|+...++ .+.+|++|||+|........ ....+||+.|+|||++.+..|+..+||||+|+++|.|++|.
T Consensus 164 EN~L~~~~~~~~~~ik~~DFGla~~~~~~~~--------~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~ 235 (382)
T KOG0032|consen 164 ENLLLASKDEGSGRIKLIDFGLAKFIKPGER--------LHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGV 235 (382)
T ss_pred HHeeeccccCCCCcEEEeeCCCceEccCCce--------EeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCC
Confidence 9999975433 45899999999998776221 34779999999999999999999999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
+||.+.... .....|........ ...|...+..+++++..++..||..|+++.++.+
T Consensus 236 ~PF~~~~~~---~~~~~i~~~~~~f~-~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 236 PPFWGETEF---EIFLAILRGDFDFT-SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCcCCChh---HHHHHHHcCCCCCC-CCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 999986643 33345555555433 4456777899999999999999999999887655
No 81
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=9.8e-40 Score=318.60 Aligned_cols=238 Identities=21% Similarity=0.313 Sum_probs=189.8
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
+.||+|+||.||+|++..+++.||+|++.... ....+.+|+++++.++|++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~--------------------- 59 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTS--------------------- 59 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcc---------------------
Confidence 46899999999999999999999999987531 1234678889999888876544
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
+..+....+..|+||||+ +++|.+.+.. ...+++.+++.++.||+.||+|||++||+||||||+|||+ +
T Consensus 60 ------~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~ 129 (328)
T cd05593 60 ------LKYSFQTKDRLCFVMEYVNGGELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---D 129 (328)
T ss_pred ------eEEEEEcCCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---C
Confidence 333445678899999999 8888877764 5679999999999999999999999999999999999999 4
Q ss_pred CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhc
Q 013125 167 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246 (449)
Q Consensus 167 ~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~ 246 (449)
.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 130 ~~~~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~- 201 (328)
T cd05593 130 KDGHIKITDFGLCKEGITDAA-------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE- 201 (328)
T ss_pred CCCcEEEecCcCCccCCCccc-------ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-
Confidence 788999999999875432211 113457999999999999999999999999999999999999999864432
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC-----CHHHHH
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP-----DYGFLK 296 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp-----~~~~l~ 296 (449)
.....+.......| ..++.++.+++..||..||.+|+ ++.++.
T Consensus 202 --~~~~~~~~~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il 249 (328)
T cd05593 202 --KLFELILMEDIKFP-----RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIM 249 (328)
T ss_pred --HHHHHhccCCccCC-----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHh
Confidence 22223322222222 34578999999999999999997 555553
No 82
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.8e-39 Score=313.86 Aligned_cols=258 Identities=22% Similarity=0.305 Sum_probs=203.7
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCc----eEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~----~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
+-..+|++.+.||+|+||.||+|.+..+++ .||+|+++.... ..++.+|+.+++.++|++++..++.+
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~----- 78 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC----- 78 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----
Confidence 456789999999999999999999866555 389998864432 33577899999999999877665533
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDI 155 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDL 155 (449)
.. ...++++|++ +++|.+++......++...++.++.||+.||+|||++||+||||
T Consensus 79 ----------------------~~-~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dl 135 (316)
T cd05108 79 ----------------------LT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDL 135 (316)
T ss_pred ----------------------cC-CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence 22 3457889988 89999998876667899999999999999999999999999999
Q ss_pred CCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-
Q 013125 156 KPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR- 234 (449)
Q Consensus 156 kp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~- 234 (449)
||+|||++ +++.+||+|||+++......... ......++..|++||++.+..++.++|||||||++|||++
T Consensus 136 kp~Nill~---~~~~~kl~DfG~a~~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~ 207 (316)
T cd05108 136 AARNVLVK---TPQHVKITDFGLAKLLGADEKEY-----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 207 (316)
T ss_pred chhheEec---CCCcEEEccccccccccCCCcce-----eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcC
Confidence 99999994 77899999999998765432211 0122344678999999999999999999999999999997
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 304 (449)
|..||.+.... .+..+.......+.+ ..++.++.+++..||..+|.+||++.++...|..+..
T Consensus 208 g~~p~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 208 GSKPYDGIPAS----EISSILEKGERLPQP---PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCCCCCCHH----HHHHHHhCCCCCCCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 99999875432 222333333333322 2346789999999999999999999999988877654
No 83
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.6e-39 Score=332.89 Aligned_cols=261 Identities=23% Similarity=0.228 Sum_probs=201.6
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
+..+++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+|+.++..++|.+++..........
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~--- 104 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD--- 104 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc---
Confidence 3457899999999999999999999999999999999865422 224677888888888887665432111000
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRD 154 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrD 154 (449)
..........++||||+ +++|.+++... ...++...+..++.|++.||.|||++||+|||
T Consensus 105 ----------------~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrD 168 (496)
T PTZ00283 105 ----------------PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRD 168 (496)
T ss_pred ----------------ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 00001112468999999 89999988643 34689999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh
Q 013125 155 IKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 155 Lkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~ 234 (449)
|||+|||++ .++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 169 LKP~NILl~---~~~~vkL~DFGls~~~~~~~~~~-----~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt 240 (496)
T PTZ00283 169 IKSANILLC---SNGLVKLGDFGFSKMYAATVSDD-----VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT 240 (496)
T ss_pred CCHHHEEEe---CCCCEEEEecccCeecccccccc-----ccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999994 78899999999998765432111 1235679999999999999999999999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|+.||.+.... ..+..+...... .+....++++.+++..||..+|.+||++.++.+
T Consensus 241 G~~Pf~~~~~~---~~~~~~~~~~~~----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 241 LKRPFDGENME---EVMHKTLAGRYD----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CCCCCCCCCHH---HHHHHHhcCCCC----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 99999875432 233333322221 123456889999999999999999999998765
No 84
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-40 Score=343.62 Aligned_cols=260 Identities=20% Similarity=0.308 Sum_probs=214.4
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCC-----ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTN-----EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHV 75 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~-----~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 75 (449)
+-..+-++.+.||+|+||+||.|...... ..||||.++...+ ...|++|+.+|..++|+|++++++++++
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-- 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-- 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC--
Confidence 33567789999999999999999875332 2499998876644 3458999999999999999999988743
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC------RRKFSLKTVLMLADQMIARIEYVHSR 148 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~------~~~~~~~~~~~i~~qil~~L~~LH~~ 148 (449)
....+|++||| ||+|+.+++.. ...++....+.++.||+.|++||+++
T Consensus 767 -------------------------~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~ 821 (1025)
T KOG1095|consen 767 -------------------------SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK 821 (1025)
T ss_pred -------------------------CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC
Confidence 45678999999 99999999987 56799999999999999999999999
Q ss_pred CccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHH
Q 013125 149 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYV 228 (449)
Q Consensus 149 giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~i 228 (449)
++|||||.++|+|++ ....|||+|||+|+......+ |+......-..+|||||.+....++.++|||||||+
T Consensus 822 ~fvHRDLAaRNCLL~---~~r~VKIaDFGlArDiy~~~y-----yr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVl 893 (1025)
T KOG1095|consen 822 HFVHRDLAARNCLLD---ERRVVKIADFGLARDIYDKDY-----YRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVL 893 (1025)
T ss_pred CCcCcchhhhheeec---ccCcEEEcccchhHhhhhchh-----eeccCccccceecCCHHHHhhcccccccchhhhHHH
Confidence 999999999999995 779999999999995444433 333333345679999999999999999999999999
Q ss_pred HHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 229 LLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 229 l~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
|||+++ |..||.+..+.+....+.+ +.++..| ..+|..+.++|..||..+|++||+|..|.+.+..++..
T Consensus 894 lWEifslG~~PY~~~~n~~v~~~~~~--ggRL~~P-----~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 894 LWEIFSLGATPYPSRSNFEVLLDVLE--GGRLDPP-----SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred HHHHHhCCCCCCCCcchHHHHHHHHh--CCccCCC-----CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 999999 9999998777644433322 3344433 44599999999999999999999999998877666543
No 85
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.6e-40 Score=320.66 Aligned_cols=247 Identities=21% Similarity=0.309 Sum_probs=196.4
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|.+.++||+|+||+||+|++..+++.||+|+++... ....+..|+.+++.++|++++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~--------------- 65 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQ--------------- 65 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcc---------------
Confidence 47999999999999999999999999999999987532 1234677888888887776443
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+..+..+.+..|+||||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+||
T Consensus 66 ------------~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NI 133 (330)
T cd05601 66 ------------LQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENV 133 (330)
T ss_pred ------------eeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHhe
Confidence 334445677899999999 9999999987667899999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc------CCCCCccchHHHHHHHHHHHHh
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL------GIEQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~~~DvwSlG~il~el~~ 234 (449)
|+ +..+.+||+|||++......... ......||+.|+|||++. +..++.++|||||||++|||++
T Consensus 134 ll---~~~~~~kL~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~ 204 (330)
T cd05601 134 LI---DRTGHIKLADFGSAARLTANKMV------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIY 204 (330)
T ss_pred EE---CCCCCEEeccCCCCeECCCCCce------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeecc
Confidence 99 47889999999999876543221 112347899999999987 4567899999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhh--cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKK--VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
|..||...... ..+..+.... ...+. ....+.++.+++..||. +|.+||+++++.
T Consensus 205 g~~Pf~~~~~~---~~~~~i~~~~~~~~~~~---~~~~~~~~~~li~~ll~-~p~~R~t~~~l~ 261 (330)
T cd05601 205 GRSPFHEGTSA---KTYNNIMNFQRFLKFPE---DPKVSSDFLDLIQSLLC-GQKERLGYEGLC 261 (330)
T ss_pred CCCCCCCCCHH---HHHHHHHcCCCccCCCC---CCCCCHHHHHHHHHHcc-ChhhCCCHHHHh
Confidence 99999875433 2333333221 11111 12357889999999997 999999988764
No 86
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.1e-39 Score=320.39 Aligned_cols=255 Identities=23% Similarity=0.271 Sum_probs=194.5
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+-++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+|+.+++.++|++++..+.......
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 93 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK----- 93 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 458999999999999999999999999999999988643 22345778999999999999877655432110
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
........|+||||++++|.+.+. ..++...+..++.||+.||+|||++||+||||||+||
T Consensus 94 ----------------~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NI 154 (359)
T cd07876 94 ----------------SLEEFQDVYLVMELMDANLCQVIH---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 154 (359)
T ss_pred ----------------CccccceeEEEEeCCCcCHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence 001224579999999888877663 3588999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
|+ +.++.+||+|||+++....... .....||..|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 155 l~---~~~~~~kl~Dfg~a~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~ 223 (359)
T cd07876 155 VV---KSDCTLKILDFGLARTACTNFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ 223 (359)
T ss_pred EE---CCCCCEEEecCCCccccccCcc--------CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 99 4788999999999975432211 134578999999999999999999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCC-------------------------HHH------------hhccChHHHHHHHHHHhC
Q 013125 241 GLKAATKKQKYDKICEKKVSTP-------------------------IEV------------LCKSHPAEFASYFHYCQS 283 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~-------------------------~~~------------~~~~~~~~~~~l~~~~l~ 283 (449)
+...... +..+.......+ ... .....+.++++++..||.
T Consensus 224 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 300 (359)
T cd07876 224 GTDHIDQ---WNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLV 300 (359)
T ss_pred CCCHHHH---HHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhc
Confidence 7543221 111111110000 000 001124678899999999
Q ss_pred CCCCCCCCHHHHHH
Q 013125 284 LTFDQRPDYGFLKR 297 (449)
Q Consensus 284 ~~p~~Rp~~~~l~~ 297 (449)
.||.+||++.++.+
T Consensus 301 ~dP~~R~t~~e~l~ 314 (359)
T cd07876 301 IDPDKRISVDEALR 314 (359)
T ss_pred cCcccCCCHHHHhc
Confidence 99999999887744
No 87
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.4e-39 Score=314.30 Aligned_cols=235 Identities=23% Similarity=0.334 Sum_probs=185.4
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||.||+|++..+++.||||+++... .......|..++..+ +|++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~----------------------- 57 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPF----------------------- 57 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCC-----------------------
Confidence 47999999999999999999999999886431 122345566665543 4554
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
++.+.......+..|+||||+ |++|.+++.. ...++...+..++.||+.||+|||++||+||||||+|||+
T Consensus 58 ----i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill--- 129 (316)
T cd05592 58 ----LTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL--- 129 (316)
T ss_pred ----ccceeeEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---
Confidence 444444455677899999999 8899888875 4579999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 130 ~~~~~~kL~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~ 202 (316)
T cd05592 130 DKDGHIKIADFGMCKENMNGEG-------KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED 202 (316)
T ss_pred CCCCCEEEccCcCCeECCCCCC-------ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH
Confidence 4788999999999976433221 123567999999999999999999999999999999999999999875442
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
+.+..+.......+ ..++.++.+++..||..+|.+||+..
T Consensus 203 ---~~~~~i~~~~~~~~-----~~~~~~~~~ll~~~l~~~P~~R~~~~ 242 (316)
T cd05592 203 ---ELFDSILNDRPHFP-----RWISKEAKDCLSKLFERDPTKRLGVD 242 (316)
T ss_pred ---HHHHHHHcCCCCCC-----CCCCHHHHHHHHHHccCCHHHcCCCh
Confidence 33333333222222 34578899999999999999999864
No 88
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.6e-39 Score=323.64 Aligned_cols=254 Identities=22% Similarity=0.290 Sum_probs=192.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
..|+++++||+|+||+||+|++..+++.||||++.... ....+.+|+++++.++|++++.+
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l-------------- 66 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKL-------------- 66 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeee--------------
Confidence 36999999999999999999999999999999986432 12346789999999988865544
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+.+..+.+..|+||||+ +++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+||
T Consensus 67 -------------~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Ni 132 (381)
T cd05626 67 -------------YYSFQDKDNLYFVMDYIPGGDMMSLLIR-MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNI 132 (381)
T ss_pred -------------EEEEecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHE
Confidence 34445678899999999 8899988875 45689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCcc----------------------------------------ccccCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRH----------------------------------------IPYRENKNLT 200 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~----------------------------------------~~~~~~~~~~ 200 (449)
|+ +..+.+||+|||+++.+........ .........+
T Consensus 133 li---~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (381)
T cd05626 133 LI---DLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLV 209 (381)
T ss_pred EE---CCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccccccccccc
Confidence 99 4788999999999864321110000 0000112467
Q ss_pred CCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHh--hcCCCHHHhhccChHHHHHHH
Q 013125 201 GTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK--KVSTPIEVLCKSHPAEFASYF 278 (449)
Q Consensus 201 gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~l~ 278 (449)
||+.|+|||++.+..++.++|||||||++|||++|..||....... ....+... ....+. ...+++++.+++
T Consensus 210 gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~i~~~~~~~~~~~---~~~~s~~~~dli 283 (381)
T cd05626 210 GTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTE---TQLKVINWENTLHIPP---QVKLSPEAVDLI 283 (381)
T ss_pred CCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHH---HHHHHHccccccCCCC---CCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999998754322 22222221 111111 123578899999
Q ss_pred HHHh--CCCCCCCCCHHHHHH
Q 013125 279 HYCQ--SLTFDQRPDYGFLKR 297 (449)
Q Consensus 279 ~~~l--~~~p~~Rp~~~~l~~ 297 (449)
.+++ ..++..|+++.++..
T Consensus 284 ~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 284 TKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HHHccCcccccCCCCHHHHhc
Confidence 8854 445556999887744
No 89
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3e-39 Score=308.28 Aligned_cols=256 Identities=21% Similarity=0.314 Sum_probs=202.3
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCC-----ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTN-----EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHV 75 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~-----~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 75 (449)
+.-++|++.+.||+|+||.||+|.+...+ ..||+|.+..... ...+.+|++++..++|++++..+
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~------- 74 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLL------- 74 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEE-------
Confidence 34568999999999999999999986554 6799998865432 23478899999999888755543
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHH
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMI 139 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------------~~~~~~~~~~i~~qil 139 (449)
.+.......|++|||+ +++|.+++.... ..++...++.++.||+
T Consensus 75 --------------------~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 134 (283)
T cd05048 75 --------------------GVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIA 134 (283)
T ss_pred --------------------EEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHH
Confidence 3344567789999999 889999887531 4578899999999999
Q ss_pred HHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCcc
Q 013125 140 ARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRR 219 (449)
Q Consensus 140 ~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~ 219 (449)
.||.|||++|++||||||+||+++ +++.++|+|||+++....... +.......++..|+|||.+.+..++.+
T Consensus 135 ~al~~lH~~~i~H~dlkp~Nil~~---~~~~~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~ 206 (283)
T cd05048 135 AGMEYLSSHHFVHRDLAARNCLVG---EGLTVKISDFGLSRDIYSADY-----YRVQSKSLLPVRWMPPEAILYGKFTTE 206 (283)
T ss_pred HHHHHHHhCCeeccccccceEEEc---CCCcEEECCCcceeecccccc-----ccccCCCcccccccCHHHhccCcCchh
Confidence 999999999999999999999994 778999999999986543322 112234456788999999998899999
Q ss_pred chHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 013125 220 DDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRL 298 (449)
Q Consensus 220 ~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~ 298 (449)
+|||||||++|||++ |..||.+..... ....+.... .. .....+|.++.+++..||+.+|.+||++.+|.+.
T Consensus 207 sDv~slG~il~el~~~g~~p~~~~~~~~---~~~~i~~~~-~~---~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 207 SDIWSFGVVLWEIFSYGLQPYYGFSNQE---VIEMIRSRQ-LL---PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHcCC-cC---CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999998 999998765432 222222221 11 1234568999999999999999999999999988
Q ss_pred HHH
Q 013125 299 FHD 301 (449)
Q Consensus 299 l~~ 301 (449)
|+.
T Consensus 280 l~~ 282 (283)
T cd05048 280 LRS 282 (283)
T ss_pred Hhc
Confidence 764
No 90
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.2e-39 Score=315.41 Aligned_cols=250 Identities=23% Similarity=0.277 Sum_probs=192.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++++.||+|+||+||+|++..+++.||+|++... .....+..|+.++..++|+++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i----------------- 63 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWI----------------- 63 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-----------------
Confidence 4799999999999999999999999999999998642 122346778888888777654
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+.+..+....++.|+||||+ |++|.+++......++...++.++.||+.||+|||++||+||||||+||
T Consensus 64 ----------~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Ni 133 (331)
T cd05597 64 ----------TNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNV 133 (331)
T ss_pred ----------CceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHE
Confidence 44444556778899999999 9999999876667899999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-----CCCCccchHHHHHHHHHHHHhC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-----IEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DvwSlG~il~el~~G 235 (449)
|+ +.++.+||+|||++.......... .....||+.|+|||++.. ..++.++|||||||++|||++|
T Consensus 134 ll---~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g 204 (331)
T cd05597 134 LL---DKNGHIRLADFGSCLRLLADGTVQ------SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYG 204 (331)
T ss_pred EE---CCCCCEEEEECCceeecCCCCCcc------ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhC
Confidence 99 478899999999997654432211 123468999999999873 4578899999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCC--CCCHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQ--RPDYGFL 295 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~--Rp~~~~l 295 (449)
+.||.+.... +.+..+.........+......+.++++++..|+..++.+ |++++++
T Consensus 205 ~~Pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~ 263 (331)
T cd05597 205 ETPFYAESLV---ETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDF 263 (331)
T ss_pred CCCCCCCCHH---HHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHH
Confidence 9999875432 3333333322222222223346788999999988653332 5565544
No 91
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1e-38 Score=304.12 Aligned_cols=261 Identities=22% Similarity=0.293 Sum_probs=203.6
Q ss_pred CCcccCCceEEeeeecccCceeEEEEEEcCCCc----eEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecc
Q 013125 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVD 73 (449)
Q Consensus 1 ~~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~----~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 73 (449)
|+-+...+|++.++||+|+||+||+|++..+++ .||+|+...... ...+.+|+.+++.+.|++++..++.
T Consensus 1 ~~~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~--- 77 (279)
T cd05109 1 MRILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGI--- 77 (279)
T ss_pred CcccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEE---
Confidence 677888999999999999999999999876665 489998865433 2346788888888888775554432
Q ss_pred hhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 013125 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLH 152 (449)
Q Consensus 74 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiH 152 (449)
+. ....++++|++ +++|.+++......++...++.++.||+.||+|||++||+|
T Consensus 78 ------------------------~~-~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH 132 (279)
T cd05109 78 ------------------------CL-TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVH 132 (279)
T ss_pred ------------------------Ec-CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 22 23467899998 88999988765567999999999999999999999999999
Q ss_pred cCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHH
Q 013125 153 RDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF 232 (449)
Q Consensus 153 rDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el 232 (449)
|||||+|||++ +++.+||+|||+++.......... .....++..|++||.+.+..++.++|||||||++|||
T Consensus 133 ~dlkp~Nil~~---~~~~~kL~dfG~~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el 204 (279)
T cd05109 133 RDLAARNVLVK---SPNHVKITDFGLARLLDIDETEYH-----ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWEL 204 (279)
T ss_pred cccccceEEEc---CCCcEEECCCCceeecccccceee-----cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHH
Confidence 99999999994 678899999999987654322110 1123346789999999998999999999999999999
Q ss_pred Hh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Q 013125 233 LR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304 (449)
Q Consensus 233 ~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 304 (449)
++ |..||....... +..........+.+ ..++.++.+++..||..||++||++.++.+.|+++..
T Consensus 205 ~t~g~~p~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 205 MTFGAKPYDGIPARE----IPDLLEKGERLPQP---PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred HcCCCCCCCCCCHHH----HHHHHHCCCcCCCC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 98 999997654322 22222222222221 3457899999999999999999999999888876644
No 92
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-40 Score=319.08 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=199.2
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEE-EecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVK-IENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK-v~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
|-+..|+++++||+||.+.||++...+.+- +|+| +.....+ ...+.+|+.+|.+|++..
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~i-yalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~---------------- 420 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQI-YALKKVVLLEADNQTLDGYRNEIALLNKLKGHD---------------- 420 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcc-hhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCc----------------
Confidence 457789999999999999999998755444 5555 4322222 335899999999998765
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
.|..++.|...+.+.|||||+-..+|..+++........-.++.|..|||.++.++|..||||.||||.|
T Consensus 421 ----------~IIqL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPAN 490 (677)
T KOG0596|consen 421 ----------KIIQLYDYEVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPAN 490 (677)
T ss_pred ----------eEEEEeeeeccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCccc
Confidence 3444566667789999999999999999998766666666899999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-----------CCccchHHHHHHH
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-----------QSRRDDLESLGYV 228 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~s~~~DvwSlG~i 228 (449)
+|+ =.|.+||+|||+|.....+++... ...-+||+.||+||.+.... .++++||||||||
T Consensus 491 FLl----VkG~LKLIDFGIA~aI~~DTTsI~-----kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCI 561 (677)
T KOG0596|consen 491 FLL----VKGRLKLIDFGIANAIQPDTTSIV-----KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCI 561 (677)
T ss_pred EEE----EeeeEEeeeechhcccCcccccee-----eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhH
Confidence 999 579999999999998887766432 34679999999999887433 4678999999999
Q ss_pred HHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 229 LLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 229 l~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
||+|++|++||...... ..++..|..-.-.++.+...++ .++.++|..||..||.+||+..+|++
T Consensus 562 LYqMvYgktPf~~~~n~--~aKl~aI~~P~~~Iefp~~~~~--~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 562 LYQMVYGKTPFGQIINQ--IAKLHAITDPNHEIEFPDIPEN--DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHHHHhcCCchHHHHHH--HHHHHhhcCCCccccccCCCCc--hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 99999999999865432 2334444333233333333322 34999999999999999999877654
No 93
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.5e-39 Score=314.85 Aligned_cols=234 Identities=20% Similarity=0.294 Sum_probs=186.5
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||.||+|++..+++.||||++... .....+..|.+++..+ +|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp------------------------ 56 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHP------------------------ 56 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCC------------------------
Confidence 4699999999999999999999999998643 1123356777777765 344
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
++..+..+....+..|+||||+ +++|...+.. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 57 ---~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill--- 129 (321)
T cd05591 57 ---FLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL--- 129 (321)
T ss_pred ---CccceeeEEEcCCeEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---
Confidence 3444555556678899999999 8899887765 5679999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.+||+|||++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 130 ~~~~~~kL~Dfg~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~ 202 (321)
T cd05591 130 DAEGHCKLADFGMCKEGILNGVT-------TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED 202 (321)
T ss_pred CCCCCEEEeecccceecccCCcc-------ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH
Confidence 47889999999998764332211 23567899999999999999999999999999999999999999875543
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
..+..+.......| ..++.++.+++..||..+|++|++.
T Consensus 203 ---~~~~~i~~~~~~~p-----~~~~~~~~~ll~~~L~~dp~~R~~~ 241 (321)
T cd05591 203 ---DLFESILHDDVLYP-----VWLSKEAVSILKAFMTKNPNKRLGC 241 (321)
T ss_pred ---HHHHHHHcCCCCCC-----CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 33444444333222 2347899999999999999999943
No 94
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.3e-39 Score=324.04 Aligned_cols=253 Identities=22% Similarity=0.298 Sum_probs=191.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|+++++||+|+||+||+|.+..+++.||||++.... ....+.+|+++++.++|++++.
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~--------------- 65 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVS--------------- 65 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcce---------------
Confidence 47999999999999999999999999999999875421 1234677899998888876544
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
++.++.+.++.|+||||+ +++|.+++.. ...++...++.++.||+.||+|||++||+||||||+||
T Consensus 66 ------------~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NI 132 (377)
T cd05629 66 ------------LYYSFQDAQYLYLIMEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNI 132 (377)
T ss_pred ------------EEEEEEcCCeeEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHE
Confidence 444456678899999999 8999998875 46789999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCcc-------cc----------------------------c-----cCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRH-------IP----------------------------Y-----RENKNLT 200 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~-------~~----------------------------~-----~~~~~~~ 200 (449)
|++ .++.+||+|||+|+.+........ .. + ......+
T Consensus 133 ll~---~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (377)
T cd05629 133 LID---RGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTV 209 (377)
T ss_pred EEC---CCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccC
Confidence 994 788999999999974432110000 00 0 0011357
Q ss_pred CCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHH
Q 013125 201 GTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHY 280 (449)
Q Consensus 201 gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 280 (449)
||+.|+|||++.+..++.++|||||||++|||++|.+||.+.... ..+..+.........+. ....+.++.+++..
T Consensus 210 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~~~i~~~~~~~~~p~-~~~~s~~~~dli~~ 285 (377)
T cd05629 210 GTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSH---ETYRKIINWRETLYFPD-DIHLSVEAEDLIRR 285 (377)
T ss_pred CCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHH---HHHHHHHccCCccCCCC-CCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999875442 23333332111111111 11346789999999
Q ss_pred HhCCCCCCCC---CHHHH
Q 013125 281 CQSLTFDQRP---DYGFL 295 (449)
Q Consensus 281 ~l~~~p~~Rp---~~~~l 295 (449)
|+. +|.+|+ ++.++
T Consensus 286 lL~-~~~~r~~r~~~~~~ 302 (377)
T cd05629 286 LIT-NAENRLGRGGAHEI 302 (377)
T ss_pred Hhc-CHhhcCCCCCHHHH
Confidence 997 777764 65554
No 95
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-40 Score=318.58 Aligned_cols=250 Identities=22% Similarity=0.266 Sum_probs=210.5
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
.++|..+++||+|+||.+++++++..+..||+|.+.-..- ......|+.++.+++|++++.+...
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds----------- 71 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDS----------- 71 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccc-----------
Confidence 3689999999999999999999999999999998764422 2246889999999999987765432
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
|-.++...||||+|| ||++.+.++... ..|+++.+..|+.||+.|+.|||+++|+|||||+.|
T Consensus 72 ---------------~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~N 136 (426)
T KOG0589|consen 72 ---------------FEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCAN 136 (426)
T ss_pred ---------------hhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhh
Confidence 223445599999999 999999998654 679999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
|+++ .++.|+|.|||+|+....... ...+++||+.|++||++.+.+|+.++|||||||++|||++-+++|
T Consensus 137 iflt---k~~~VkLgDfGlaK~l~~~~~-------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF 206 (426)
T KOG0589|consen 137 IFLT---KDKKVKLGDFGLAKILNPEDS-------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAF 206 (426)
T ss_pred hhcc---ccCceeecchhhhhhcCCchh-------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhccccc
Confidence 9996 778889999999998876652 135889999999999999999999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRL 298 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~ 298 (449)
.+.+- ...+.+|+...+.+. + ..+..+++.++..|+..+|..||++.+|...
T Consensus 207 ~a~~m---~~Li~ki~~~~~~Pl-p---~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 207 KASNM---SELILKINRGLYSPL-P---SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred Cccch---HHHHHHHhhccCCCC-C---ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 87544 355666666553322 2 3447899999999999999999999988664
No 96
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.4e-39 Score=315.09 Aligned_cols=261 Identities=21% Similarity=0.324 Sum_probs=201.2
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcC-----CCceEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeecch
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHVDH 74 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~ 74 (449)
+-+++|++.+.||.|+||.||+|.+.. +++.||+|++..... .+.+..|+++++.+ +|++++..+..
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~---- 79 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGA---- 79 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeee----
Confidence 456799999999999999999997543 457899998875332 23467899999988 66765554332
Q ss_pred hhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc------------------------------
Q 013125 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR------------------------------ 123 (449)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~------------------------------ 123 (449)
+...+...+++|||+ +++|.+++....
T Consensus 80 ----------------------~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (337)
T cd05054 80 ----------------------CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVS 137 (337)
T ss_pred ----------------------EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCC
Confidence 223456788999999 889988875321
Q ss_pred ------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEE
Q 013125 124 ------------------------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 173 (449)
Q Consensus 124 ------------------------------~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL 173 (449)
..+++..+..++.||+.||+|||++||+||||||+|||+. +++.++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL 214 (337)
T cd05054 138 SSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKI 214 (337)
T ss_pred ccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEE
Confidence 2578899999999999999999999999999999999994 6789999
Q ss_pred EeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHH
Q 013125 174 IDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYD 252 (449)
Q Consensus 174 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~ 252 (449)
+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |..||.+..... .+.
T Consensus 215 ~DfG~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~---~~~ 286 (337)
T cd05054 215 CDFGLARDIYKDPDY-----VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE---EFC 286 (337)
T ss_pred eccccchhcccCcch-----hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH---HHH
Confidence 999999865432211 11234456778999999999999999999999999999997 999998744322 122
Q ss_pred HHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Q 013125 253 KICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304 (449)
Q Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 304 (449)
........... ....++++.+++..||+.+|++||++.+|.+.|++++.
T Consensus 287 ~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 287 RRLKEGTRMRA---PEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHhccCCCCC---CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22222211111 13457889999999999999999999999999998765
No 97
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-39 Score=307.55 Aligned_cols=246 Identities=21% Similarity=0.217 Sum_probs=197.3
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCCC-c----hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-H----PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
..||+|++|.||+|.+ +++.||||++..... . +.+.+|+.+++.++|++++++++...+.
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~------------- 90 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI------------- 90 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-------------
Confidence 6789999999999988 788999999875432 2 3466999999999999877766543221
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCcEEeecC
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~Nill~~~ 165 (449)
.......++||||+ +++|.+++.. .+.+++.....++.|++.||.|||+ .+++||||||+|||+
T Consensus 91 ----------~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill--- 156 (283)
T PHA02988 91 ----------VDDLPRLSLILEYCTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV--- 156 (283)
T ss_pred ----------ccCCCceEEEEEeCCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---
Confidence 01235679999999 8899999875 4578999999999999999999998 499999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC--CCCCccchHHHHHHHHHHHHhCCCCCCCCh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG--IEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DvwSlG~il~el~~G~~pf~~~~ 243 (449)
++++.+||+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||.+..
T Consensus 157 ~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~ 226 (283)
T PHA02988 157 TENYKLKIICHGLEKILSSPP----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT 226 (283)
T ss_pred CCCCcEEEcccchHhhhcccc----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC
Confidence 478899999999997654322 13467899999999976 679999999999999999999999998764
Q ss_pred hhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Q 013125 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303 (449)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~ 303 (449)
.. +.+..+.......+.+ ..+++++.+++.+||+.||.+||++.++.+.|+.+.
T Consensus 227 ~~---~~~~~i~~~~~~~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 227 TK---EIYDLIINKNNSLKLP---LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HH---HHHHHHHhcCCCCCCC---CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 32 3333343333332222 245889999999999999999999999999888663
No 98
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-39 Score=321.20 Aligned_cols=255 Identities=18% Similarity=0.225 Sum_probs=196.1
Q ss_pred ccCCceEEeeeecccCceeEEEEEEc--CCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHV--DTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~--~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++..+|+++++||+|+||.||+|... .+++.||+|.+... ....+|+++++.++|+++++++.
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h~~iv~~~~------------ 153 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTISHRAIINLIH------------ 153 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcCCCCccceee------------
Confidence 56678999999999999999999764 45678999987643 34578999999999988665533
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
+.......|+|||+++++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 154 ---------------~~~~~~~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nil 217 (392)
T PHA03207 154 ---------------AYRWKSTVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIF 217 (392)
T ss_pred ---------------eEeeCCEEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEE
Confidence 2345578899999999999988843 567999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ +..+.++|+|||+++......... ......||..|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 218 l---~~~~~~~l~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 289 (392)
T PHA03207 218 L---DEPENAVLGDFGAACKLDAHPDTP-----QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFG 289 (392)
T ss_pred E---cCCCCEEEccCccccccCcccccc-----cccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 9 478899999999997655432211 12356799999999999999999999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHH---------------------------H--hhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIE---------------------------V--LCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~---------------------------~--~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
.........+..+.......+.. . ....++.++.+++..||..+|.+||++
T Consensus 290 ~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa 369 (392)
T PHA03207 290 KQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSA 369 (392)
T ss_pred CCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCH
Confidence 65443333333333322111110 0 012335567777788888888888887
Q ss_pred HHHHH
Q 013125 293 GFLKR 297 (449)
Q Consensus 293 ~~l~~ 297 (449)
.++..
T Consensus 370 ~e~l~ 374 (392)
T PHA03207 370 QDILS 374 (392)
T ss_pred HHHhh
Confidence 76643
No 99
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=306.99 Aligned_cols=287 Identities=42% Similarity=0.676 Sum_probs=236.6
Q ss_pred ceEEeeeecccCceeEEEEEEcCCC-ceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTN-EIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~-~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
+|++.++||+|+||.||+|.+..++ ..+|+|++..... ...+..|..++..+....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~--------------------- 77 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKN--------------------- 77 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhc---------------------
Confidence 8999999999999999999997664 6799999876433 226889999999988410
Q ss_pred cccCCCcCeeEEec-ccCCeeEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 85 SSTLGGIPNIKWYG-VDGEDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 85 ~~~~~~i~~~~~~~-~~~~~~~lv~e~~g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
...+++.+...| ....+.||||+++|.+|.++..... +.|+..++..++.|++.+|++||+.|++||||||+|+++
T Consensus 78 --~~~~~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~ 155 (322)
T KOG1164|consen 78 --GPSHFPKLLDHGRSTEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVV 155 (322)
T ss_pred --CCCCCCEEEEeccCCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeee
Confidence 011788888899 5888999999999999999997655 789999999999999999999999999999999999999
Q ss_pred ecCC--CCCeEEEEeeccee--eecCCCCCccccccC-CCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 163 GLGR--KANQVYIIDFGLAK--KYRDPTTNRHIPYRE-NKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 163 ~~~~--~~~~vkL~DfGla~--~~~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+... +...++|+|||+|+ .+.........+.+. ...+.||.+|++++++.+.+.++++|+||+++++.|+..|.+
T Consensus 156 g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~L 235 (322)
T KOG1164|consen 156 GQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSL 235 (322)
T ss_pred cCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCC
Confidence 8543 22689999999999 443333222344444 456779999999999999999999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccccc
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWT 317 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~dw~ 317 (449)
||.+.........+........... .+...|.++.+++..+-..++.++|+|..+...|++.+...+......+||.
T Consensus 236 PW~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~ 312 (322)
T KOG1164|consen 236 PWEALEMTDLKSKFEKDPRKLLTDR---FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWE 312 (322)
T ss_pred CCccccccchHHHHHHHhhhhcccc---ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCccc
Confidence 9988776555555544443333322 4445578999999999999999999999999999999999999999999997
Q ss_pred ccc
Q 013125 318 ILK 320 (449)
Q Consensus 318 ~l~ 320 (449)
...
T Consensus 313 ~~~ 315 (322)
T KOG1164|consen 313 VKL 315 (322)
T ss_pred ccc
Confidence 644
No 100
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.2e-39 Score=313.96 Aligned_cols=235 Identities=18% Similarity=0.282 Sum_probs=187.0
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||+||+|++..+++.||||++... .....+..|..++..+ +|++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~----------------------- 57 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPF----------------------- 57 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCc-----------------------
Confidence 4799999999999999999999999987643 1223456677777655 3544
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
++.+..+....+..|+||||+ +++|.+++.. ...++...++.++.||+.||+|||++||+||||||+|||+
T Consensus 58 ----iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~-~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli--- 129 (320)
T cd05590 58 ----LTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL--- 129 (320)
T ss_pred ----hhceeeEEEcCCEEEEEEcCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---
Confidence 444445556778899999999 8899887765 4679999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 130 ~~~~~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~ 202 (320)
T cd05590 130 DHEGHCKLADFGMCKEGIFNGK-------TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED 202 (320)
T ss_pred CCCCcEEEeeCCCCeecCcCCC-------cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH
Confidence 4788999999999875432211 123567899999999999999999999999999999999999999875432
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
..+..+.......+ ...+.++.+++..||..||.+|++..
T Consensus 203 ---~~~~~i~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 203 ---DLFEAILNDEVVYP-----TWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred ---HHHHHHhcCCCCCC-----CCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 33344443333222 23578999999999999999999973
No 101
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=5.5e-39 Score=303.34 Aligned_cols=256 Identities=20% Similarity=0.344 Sum_probs=205.2
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+....|.+.++||+|+||.||+|.+.++++.||+|+...... ...+.+|+++++.++|++++..+.
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~------------- 69 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG------------- 69 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEE-------------
Confidence 445679999999999999999999999999999998775432 345788999999999887665543
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+.......+++|||+ +++|.+++.... ..+++..++.++.|++.||+|||++|++||||||+||
T Consensus 70 --------------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~ni 135 (263)
T cd05052 70 --------------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 135 (263)
T ss_pred --------------EEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceE
Confidence 334566789999999 889999887543 4589999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf 239 (449)
+++ +++.+||+|||++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 136 l~~---~~~~~kl~df~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~ 206 (263)
T cd05052 136 LVG---ENHLVKVADFGLSRLMTGDTYT------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 206 (263)
T ss_pred EEc---CCCcEEeCCCccccccccceee------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCC
Confidence 994 7889999999999866543221 1122334678999999999999999999999999999998 99999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
.+..... ....+ ...... ......|.++.+++.+||..+|++||++.++.+.|+.+
T Consensus 207 ~~~~~~~---~~~~~-~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 207 PGIDLSQ---VYELL-EKGYRM---ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCHHH---HHHHH-HCCCCC---CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 8754322 22222 211111 22345689999999999999999999999999988765
No 102
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.2e-39 Score=314.85 Aligned_cols=238 Identities=19% Similarity=0.295 Sum_probs=186.7
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHc-CCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||+||+|++..+++.||+|++.... ....+.+|+.++..+. |+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~------------------------ 56 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNP------------------------ 56 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCC------------------------
Confidence 47999999999999999999999999987532 1223667888887774 44
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
++..+..+....+..|+||||+ +++|..++.. .+.+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 57 ---~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~-- 130 (327)
T cd05617 57 ---FLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQR-QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD-- 130 (327)
T ss_pred ---CEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe--
Confidence 3444555556778899999999 8899887764 45799999999999999999999999999999999999994
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
.++.+||+|||+++....... .....+||+.|+|||++.+..++.++|||||||++|||++|..||......
T Consensus 131 -~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~ 202 (327)
T cd05617 131 -ADGHIKLTDYGMCKEGLGPGD-------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDN 202 (327)
T ss_pred -CCCCEEEeccccceeccCCCC-------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCC
Confidence 788999999999875332221 123567999999999999999999999999999999999999999653221
Q ss_pred c----HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 246 T----KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 246 ~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
. .......+.......| ...+..+.+++..||..||.+|++..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 203 PDMNTEDYLFQVILEKPIRIP-----RFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred cccccHHHHHHHHHhCCCCCC-----CCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 1 1122223333222222 34578899999999999999999853
No 103
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.1e-39 Score=312.59 Aligned_cols=235 Identities=21% Similarity=0.303 Sum_probs=184.7
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||.||+|++..+++.||+|+++.. ........|..++..+ .|++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~----------------------- 57 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPF----------------------- 57 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCC-----------------------
Confidence 4799999999999999999999999988643 1223456666666543 4544
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
+..+..+....++.|+||||+ +++|.+++.. ...++...+..++.||+.||+|||++||+||||||+|||+
T Consensus 58 ----i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~--- 129 (316)
T cd05620 58 ----LTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML--- 129 (316)
T ss_pred ----ccCeeEEEEeCCEEEEEECCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---
Confidence 444444556678899999999 8899888765 4578999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.++|+|||+++....... ......||..|+|||++.+..++.++|||||||++|||++|..||.+....
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~ 202 (316)
T cd05620 130 DRDGHIKIADFGMCKENVFGDN-------RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED 202 (316)
T ss_pred CCCCCEEeCccCCCeecccCCC-------ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence 4778999999999874322111 123567899999999999999999999999999999999999999875432
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
.....+....... ....+.++++++..||..||.+|++..
T Consensus 203 ---~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~dP~~R~~~~ 242 (316)
T cd05620 203 ---ELFESIRVDTPHY-----PRWITKESKDILEKLFERDPTRRLGVV 242 (316)
T ss_pred ---HHHHHHHhCCCCC-----CCCCCHHHHHHHHHHccCCHHHcCCCh
Confidence 2232222222111 123578899999999999999999963
No 104
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1e-39 Score=324.55 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=192.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
+.|+++++||+|+||.||+|++..+++.||||++... .....+.+|+++++.++|++++.++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~------------- 67 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLY------------- 67 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEE-------------
Confidence 4799999999999999999999999999999987542 1233467899999999888755543
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
......+..|+||||+ +++|.+++.. ...++...++.++.||+.||+|||++||+||||||+||
T Consensus 68 --------------~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Ni 132 (376)
T cd05598 68 --------------YSFQDKDNLYFVMDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNI 132 (376)
T ss_pred --------------EEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHE
Confidence 3345677899999999 8999998875 45689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCcc------------------------------------ccccCCCCCCCCcc
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRH------------------------------------IPYRENKNLTGTAR 204 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~------------------------------------~~~~~~~~~~gt~~ 204 (449)
|+ +.++.+||+|||+|..+........ .........+||+.
T Consensus 133 ll---~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 209 (376)
T cd05598 133 LI---DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPN 209 (376)
T ss_pred EE---CCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCcc
Confidence 99 4788999999999854321100000 00001124579999
Q ss_pred ccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCC
Q 013125 205 YASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSL 284 (449)
Q Consensus 205 y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 284 (449)
|+|||++.+..++.++|||||||++|||++|+.||.+..... ....+.........+ ....+++++.+++..|+ .
T Consensus 210 y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~---~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~l~-~ 284 (376)
T cd05598 210 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAE---TQLKVINWETTLHIP-SQAKLSREASDLILRLC-C 284 (376)
T ss_pred ccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHH---HHHHHhccCccccCC-CCCCCCHHHHHHHHHHh-c
Confidence 999999999999999999999999999999999998765432 222222211111111 11345778899999876 5
Q ss_pred CCCCCC---CHHHH
Q 013125 285 TFDQRP---DYGFL 295 (449)
Q Consensus 285 ~p~~Rp---~~~~l 295 (449)
+|.+|+ ++.++
T Consensus 285 ~p~~R~~~~t~~el 298 (376)
T cd05598 285 GAEDRLGKNGADEI 298 (376)
T ss_pred CHhhcCCCCCHHHH
Confidence 999999 55555
No 105
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.6e-39 Score=316.67 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=194.8
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+.++|++++.||.|+||+||+|.+..+++.||||++.... ....+.+|+++++.++|++++..+......
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 86 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPA------ 86 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccc------
Confidence 5689999999999999999999999999999999876432 123467899999999999877654322110
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
..+......|+++++++++|.+++. ...++...++.++.||+.||+|||++||+||||||+||
T Consensus 87 ---------------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Ni 149 (343)
T cd07878 87 ---------------TSIENFNEVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNV 149 (343)
T ss_pred ---------------ccccccCcEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhE
Confidence 0112335679999999999988775 35699999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
|++ .++.+||+|||+++...... ....||..|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus 150 l~~---~~~~~kl~Dfg~~~~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf 216 (343)
T cd07878 150 AVN---EDCELRILDFGLARQADDEM----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALF 216 (343)
T ss_pred EEC---CCCCEEEcCCccceecCCCc----------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCC
Confidence 994 78899999999998654322 24578999999999887 56899999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCC--------------------------HHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTP--------------------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~--------------------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
.+....... ..+.......+ ......+.++.+.+++..|+..||.+||++.
T Consensus 217 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ 293 (343)
T cd07878 217 PGNDYIDQL---KRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISAS 293 (343)
T ss_pred CCCCHHHHH---HHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 875432222 22111111111 0111223455678888999999999999887
Q ss_pred HHHH
Q 013125 294 FLKR 297 (449)
Q Consensus 294 ~l~~ 297 (449)
++.+
T Consensus 294 ell~ 297 (343)
T cd07878 294 EALA 297 (343)
T ss_pred HHhc
Confidence 7643
No 106
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.6e-39 Score=319.61 Aligned_cols=251 Identities=22% Similarity=0.282 Sum_probs=197.5
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
-.++|++.++||+|+||.||+|++..+++.||+|++... .....+..|+.+++.++|++++..
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~------------ 108 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQL------------ 108 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceE------------
Confidence 346899999999999999999999999999999998642 122336688999998888765443
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
..+....+..|+||||+ |++|.+++.. ..++...+..++.||+.||+|||++||+||||||+
T Consensus 109 ---------------~~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~ 171 (370)
T cd05596 109 ---------------HYAFQDDKYLYMVMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPD 171 (370)
T ss_pred ---------------EEEEecCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHH
Confidence 34445678899999999 8999988764 46899999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC----CCCccchHHHHHHHHHHHHh
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI----EQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~~DvwSlG~il~el~~ 234 (449)
|||+ +.++.+||+|||++......... ......||+.|+|||++.+. .++.++|||||||++|||++
T Consensus 172 NILl---~~~~~~kL~DfG~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyellt 242 (370)
T cd05596 172 NMLL---DKSGHLKLADFGTCMKMDANGMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 242 (370)
T ss_pred HEEE---cCCCCEEEEeccceeeccCCCcc------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHh
Confidence 9999 47899999999999865433211 12356799999999998754 37899999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCC--CCCHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQ--RPDYGFLKR 297 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~--Rp~~~~l~~ 297 (449)
|+.||.+.... ..+..+.........+. ....+.++.+++..||..+|.+ |++++++.+
T Consensus 243 G~~Pf~~~~~~---~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 243 GDTPFYADSLV---GTYSKIMDHKNSLTFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCCcCCCCHH---HHHHHHHcCCCcCCCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 99999875432 33444443222111111 1235789999999999988887 999887644
No 107
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.6e-38 Score=300.14 Aligned_cols=255 Identities=24% Similarity=0.384 Sum_probs=201.8
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+..++|++.++||+|+||.||+|.+..++ .||+|++..... ...+.+|+++++.++|++++..+..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~------------ 69 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV------------ 69 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEE------------
Confidence 45689999999999999999999986554 599998875332 3468899999999998876554332
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
. .....|+||||+ +++|.+++... ...+++..++.++.|++.||+|||+.|++||||||+||
T Consensus 70 ---------------~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Ni 133 (262)
T cd05071 70 ---------------V-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 133 (262)
T ss_pred ---------------E-CCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccE
Confidence 1 335579999999 78999998753 34589999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf 239 (449)
+++ +++.++|+|||++......... ......++..|++||+..+..++.++|||||||++|||++ |..||
T Consensus 134 ll~---~~~~~~L~dfg~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~ 204 (262)
T cd05071 134 LVG---ENLVCKVADFGLARLIEDNEYT------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 204 (262)
T ss_pred EEc---CCCcEEeccCCceeeccccccc------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence 994 6788999999999766433211 1123456778999999998899999999999999999999 89999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~ 303 (449)
.+.... .....+.. ....+. ....+..+.+++..||..+|.+||++.++.+.|+++|
T Consensus 205 ~~~~~~---~~~~~~~~-~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 205 PGMVNR---EVLDQVER-GYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CCCChH---HHHHHHhc-CCCCCC---ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 775432 22222221 111111 2345789999999999999999999999999998765
No 108
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3e-39 Score=318.46 Aligned_cols=245 Identities=22% Similarity=0.298 Sum_probs=189.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+.|+++++||+|+||+||+|++..+++.||||++..... ...+.+|+++++.++|++++..+.
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~-------------- 139 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHD-------------- 139 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeee--------------
Confidence 578899999999999999999999999999999865432 235788999999999887655433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+....+..++||||+ +++|.+. .......+..++.||+.||+|||++||+||||||+|||+
T Consensus 140 -------------~~~~~~~~~lv~e~~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll 201 (353)
T PLN00034 140 -------------MFDHNGEIQVLLEFMDGGSLEGT-----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI 201 (353)
T ss_pred -------------EeccCCeEEEEEecCCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE
Confidence 335567889999999 7777542 335677888999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-----CCCCccchHHHHHHHHHHHHhCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-----IEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
++++.+||+|||+++....... ......||..|+|||++.. ...+.++|||||||++|||++|+.
T Consensus 202 ---~~~~~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~ 271 (353)
T PLN00034 202 ---NSAKNVKIADFGVSRILAQTMD-------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRF 271 (353)
T ss_pred ---cCCCCEEEcccccceecccccc-------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCC
Confidence 4788999999999987643221 1235578999999998743 234678999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
||..............+.... .......++.++.+++..||..+|++||++.++.+
T Consensus 272 pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 272 PFGVGRQGDWASLMCAICMSQ----PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred CCCCCCCccHHHHHHHHhccC----CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 998433322222222221111 11122355789999999999999999999888754
No 109
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.5e-39 Score=317.08 Aligned_cols=238 Identities=22% Similarity=0.310 Sum_probs=188.6
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
+.||+|+||.||+|++..+++.||+|++.... ....+..|+++++.++|++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~--------------------- 59 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA--------------------- 59 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCc---------------------
Confidence 46999999999999999999999999986431 1234567888888888776443
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCcEEeecC
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~Nill~~~ 165 (449)
+..+....+..|+||||+ +++|.+++.. ...+++..++.++.||+.||+|||+ +||+||||||+|||+
T Consensus 60 ------~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll--- 129 (325)
T cd05594 60 ------LKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML--- 129 (325)
T ss_pred ------eEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---
Confidence 344445677899999999 8888877654 5579999999999999999999998 799999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|..||.+....
T Consensus 130 ~~~~~~kL~Dfg~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~ 202 (325)
T cd05594 130 DKDGHIKITDFGLCKEGIKDGAT-------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 202 (325)
T ss_pred CCCCCEEEecCCCCeecCCCCcc-------cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH
Confidence 47889999999998754322211 13457999999999999999999999999999999999999999875432
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC-----CHHHHH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP-----DYGFLK 296 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp-----~~~~l~ 296 (449)
.....+.......| ...++++.+++..||..||.+|+ ++.++.
T Consensus 203 ---~~~~~i~~~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il 250 (325)
T cd05594 203 ---KLFELILMEEIRFP-----RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIM 250 (325)
T ss_pred ---HHHHHHhcCCCCCC-----CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHh
Confidence 22333333332222 34578999999999999999997 655553
No 110
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.7e-39 Score=317.32 Aligned_cols=205 Identities=22% Similarity=0.302 Sum_probs=169.4
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|++++..+......
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~------ 95 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQ------ 95 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccc------
Confidence 4589999999999999999999999999999999886432 233577899999999999877665432111
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.........|+||||++++|.+.+. ..++...+..++.||+.||.|||++||+||||||+||
T Consensus 96 ---------------~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NI 157 (364)
T cd07875 96 ---------------KSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157 (364)
T ss_pred ---------------ccccccCeEEEEEeCCCCCHHHHHH---hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHE
Confidence 0112335679999999888887764 3588999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
|+ +.++.+||+|||+++....... .....+|..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 158 ll---~~~~~~kL~DfG~a~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 226 (364)
T cd07875 158 VV---KSDCTLKILDFGLARTAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226 (364)
T ss_pred EE---CCCCcEEEEeCCCccccCCCCc--------ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCC
Confidence 99 4788999999999976543221 134578999999999999999999999999999999999999998
Q ss_pred CChh
Q 013125 241 GLKA 244 (449)
Q Consensus 241 ~~~~ 244 (449)
+...
T Consensus 227 ~~~~ 230 (364)
T cd07875 227 GTDH 230 (364)
T ss_pred CCCH
Confidence 7554
No 111
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=318.88 Aligned_cols=242 Identities=22% Similarity=0.314 Sum_probs=201.8
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.|.-++.||.|+||.||-|++..|.+.||||.+.-. .++..+++|+++|+.|.|+|.+.+-
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYk-------------- 92 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYK-------------- 92 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCccccc--------------
Confidence 466788999999999999999999999999986533 2345689999999999999866543
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
.|...+...|||||||-|+..|++.-..+++.+-.+..|..+.+.||.|||+.+.||||||+.|||+
T Consensus 93 -------------gCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL 159 (948)
T KOG0577|consen 93 -------------GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL 159 (948)
T ss_pred -------------ceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe
Confidence 3444556779999999999999998778889999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc---CCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+ +.+.|||+|||.|..... .++++|||.|||||+|+ .+.|+-++||||||+++.||...++|+
T Consensus 160 s---e~g~VKLaDFGSAsi~~P-----------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPl 225 (948)
T KOG0577|consen 160 S---EPGLVKLADFGSASIMAP-----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 225 (948)
T ss_pred c---CCCeeeeccccchhhcCc-----------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCc
Confidence 6 899999999999865432 35899999999999987 356999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
..++...-.. .|....-+... ...++..|+.+++.||+.-|.+||+.+++.
T Consensus 226 FnMNAMSALY---HIAQNesPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll 276 (948)
T KOG0577|consen 226 FNMNAMSALY---HIAQNESPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELL 276 (948)
T ss_pred cCchHHHHHH---HHHhcCCCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHh
Confidence 9887764332 23332222222 344578999999999999999999988754
No 112
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.7e-39 Score=315.92 Aligned_cols=244 Identities=23% Similarity=0.265 Sum_probs=190.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.++||+|+||+||+|++..+++.||+|++.... ....+..|+.++..+.|++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~------------------ 62 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQW------------------ 62 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCC------------------
Confidence 57999999999999999999999999999999876421 1223566777777777665
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+..+..+....+..|+||||+ |++|.+++......++...++.++.||+.||+|||++||+||||||+||
T Consensus 63 ---------i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Ni 133 (331)
T cd05624 63 ---------ITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNV 133 (331)
T ss_pred ---------EeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHE
Confidence 344444556778899999999 9999999987667899999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-----CCCCccchHHHHHHHHHHHHhC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-----IEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DvwSlG~il~el~~G 235 (449)
|+ +.++.+||+|||++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 134 ll---~~~~~~kl~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g 204 (331)
T cd05624 134 LL---DMNGHIRLADFGSCLKMNQDGTV------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 204 (331)
T ss_pred EE---cCCCCEEEEeccceeeccCCCce------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhC
Confidence 99 47789999999999876543221 1124579999999999876 4578899999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp 290 (449)
+.||.+.... +.+..+.......+.+......+.++++++..|+..++ +|+
T Consensus 205 ~~Pf~~~~~~---~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~-~~~ 255 (331)
T cd05624 205 ETPFYAESLV---ETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRE-RRL 255 (331)
T ss_pred CCCccCCCHH---HHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCch-hhc
Confidence 9999865432 33334433322222233334567899999999998644 443
No 113
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.2e-39 Score=322.83 Aligned_cols=253 Identities=23% Similarity=0.303 Sum_probs=191.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
.+|+++++||+|+||+||+|++..+++.||+|++.... ....+.+|+++++.++|++++.+
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~-------------- 66 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRL-------------- 66 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeE--------------
Confidence 47999999999999999999999999999999876432 12346789999999988765544
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+..+...+..|+||||+ +++|.+++.. ...++...++.++.||+.||+|||++||+||||||+||
T Consensus 67 -------------~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NI 132 (382)
T cd05625 67 -------------YYSFQDKDNLYFVMDYIPGGDMMSLLIR-MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNI 132 (382)
T ss_pred -------------EEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 33445677899999999 8899988865 45689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCcc----------------------------------------ccccCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRH----------------------------------------IPYRENKNLT 200 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~----------------------------------------~~~~~~~~~~ 200 (449)
|+ +.++.+||+|||+|..+........ ..-......+
T Consensus 133 Ll---~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (382)
T cd05625 133 LI---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLV 209 (382)
T ss_pred EE---CCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccc
Confidence 99 4788999999999864321100000 0000112457
Q ss_pred CCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHH
Q 013125 201 GTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHY 280 (449)
Q Consensus 201 gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 280 (449)
||+.|+|||++.+..++.++|||||||++|||++|++||.+.... +....+.........+. ....+++..+++..
T Consensus 210 gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~ 285 (382)
T cd05625 210 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPL---ETQMKVINWQTSLHIPP-QAKLSPEASDLIIK 285 (382)
T ss_pred cCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHH---HHHHHHHccCCCcCCCC-cccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999875443 22223332111111111 12346788888888
Q ss_pred HhCCCCCCCCC---HHHH
Q 013125 281 CQSLTFDQRPD---YGFL 295 (449)
Q Consensus 281 ~l~~~p~~Rp~---~~~l 295 (449)
++ .+|.+|++ ++++
T Consensus 286 l~-~~p~~R~~~~~~~ei 302 (382)
T cd05625 286 LC-RGPEDRLGKNGADEI 302 (382)
T ss_pred Hc-cCHhHcCCCCCHHHH
Confidence 76 59999987 5544
No 114
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=323.78 Aligned_cols=265 Identities=17% Similarity=0.219 Sum_probs=205.1
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHc-CCCcceeeEeecchhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.-+++|.+.|.+|||+.||+|++...+..||+|.+-..+. .....+|+++|+.|+ |+|+|.+++.+...
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~-------- 107 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAIN-------- 107 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEecccccc--------
Confidence 4578999999999999999999988889999997654422 224789999999998 77777766532111
Q ss_pred hhcccCCCcCeeEEeccc-CCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCC
Q 013125 83 IFSSTLGGIPNIKWYGVD-GEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRG--FLHRDIKP 157 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~g--iiHrDLkp 157 (449)
-.+.. .-.++|.|||| |++|.|++... ...|++.++++|++|+++|+.+||.+. |||||||-
T Consensus 108 -------------~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKi 174 (738)
T KOG1989|consen 108 -------------RSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKI 174 (738)
T ss_pred -------------ccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhh
Confidence 01222 35678999999 68999999843 455999999999999999999999998 99999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCC-CCcccccc-CCCCCCCCccccccccc---cCCCCCccchHHHHHHHHHHH
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPT-TNRHIPYR-ENKNLTGTARYASCNTH---LGIEQSRRDDLESLGYVLLYF 232 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~-~~~~~~~~-~~~~~~gt~~y~aPE~~---~~~~~s~~~DvwSlG~il~el 232 (449)
||||++ .++..||||||.|....... ....+.+- ..-....|+.|+|||++ .+.+.++|+|||+|||+||-|
T Consensus 175 ENvLls---~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkL 251 (738)
T KOG1989|consen 175 ENVLLS---ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKL 251 (738)
T ss_pred hheEEc---CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHH
Confidence 999995 88899999999986432222 11111111 11234569999999965 578899999999999999999
Q ss_pred HhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Q 013125 233 LRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304 (449)
Q Consensus 233 ~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 304 (449)
++...||.+... ..|+...+.+|.. ..++..+.+||..||+.||++||+.-++...+.++..
T Consensus 252 Cy~t~PFe~sg~-------laIlng~Y~~P~~---p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 252 CYFTTPFEESGK-------LAILNGNYSFPPF---PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred HHhCCCcCcCcc-------eeEEeccccCCCC---ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 999999987422 2466777777764 3457899999999999999999996666555554433
No 115
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.2e-38 Score=317.97 Aligned_cols=258 Identities=19% Similarity=0.261 Sum_probs=200.5
Q ss_pred CCceEEeeeecccCceeEEEEEEcCC-----CceEEEEEecCCCC---chhHHHHHHHHHHHc-CCCcceeeEeecchhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTK---HPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVI 76 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~-----~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~ 76 (449)
.++|+++++||+|+||.||+|.+... ...||||++..... ...+.+|+++++.+. |+++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~-------- 107 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLL-------- 107 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEE--------
Confidence 57888999999999999999987433 34699999865432 235788999999996 77655544
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc--------------------------------
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-------------------------------- 123 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-------------------------------- 123 (449)
.++......||||||+ +++|.+++....
T Consensus 108 -------------------~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (400)
T cd05105 108 -------------------GACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVI 168 (400)
T ss_pred -------------------EEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhh
Confidence 3445667889999999 899988875421
Q ss_pred ---------------------------------------------------------------CCCCHHHHHHHHHHHHH
Q 013125 124 ---------------------------------------------------------------RKFSLKTVLMLADQMIA 140 (449)
Q Consensus 124 ---------------------------------------------------------------~~~~~~~~~~i~~qil~ 140 (449)
..+++..++.++.||+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~ 248 (400)
T cd05105 169 LSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVAR 248 (400)
T ss_pred hhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence 24778888999999999
Q ss_pred HHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccc
Q 013125 141 RIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD 220 (449)
Q Consensus 141 ~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~ 220 (449)
||+|||+.||+||||||+|||++ +++.+||+|||+++........ .......++..|+|||++.+..++.++
T Consensus 249 aL~~LH~~~ivH~dikp~Nill~---~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~ 320 (400)
T cd05105 249 GMEFLASKNCVHRDLAARNVLLA---QGKIVKICDFGLARDIMHDSNY-----VSKGSTFLPVKWMAPESIFDNLYTTLS 320 (400)
T ss_pred HHHHHHhCCeeCCCCChHhEEEe---CCCEEEEEeCCcceeccccccc-----cccCCcCCCcceEChhhhcCCCCCchh
Confidence 99999999999999999999994 6788999999999865433211 112344567889999999998999999
Q ss_pred hHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 221 DLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 221 DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
|||||||++|||++ |..||....... .+...+......+ ....++.++.+++..||..+|++||++.+|.+.|
T Consensus 321 DiwSlGvil~ellt~g~~P~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l 394 (400)
T cd05105 321 DVWSYGILLWEIFSLGGTPYPGMIVDS---TFYNKIKSGYRMA---KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIV 394 (400)
T ss_pred hHHHHHHHHHHHHHCCCCCCcccchhH---HHHHHHhcCCCCC---CCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHH
Confidence 99999999999997 999998754321 1111122222222 1234588999999999999999999999999999
Q ss_pred HHHHH
Q 013125 300 HDLFS 304 (449)
Q Consensus 300 ~~~~~ 304 (449)
+.+++
T Consensus 395 ~~l~~ 399 (400)
T cd05105 395 ESLLP 399 (400)
T ss_pred HHHcC
Confidence 87653
No 116
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8.9e-39 Score=315.37 Aligned_cols=255 Identities=20% Similarity=0.232 Sum_probs=194.2
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+-++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.++|++++..+.......
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 89 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK----- 89 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc-----
Confidence 45899999999999999999999999999999998864321 234678999999999999887765432110
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
........|+||||+.++|.+.+. ..++...+..++.||+.||.|||++||+||||||+||
T Consensus 90 ----------------~~~~~~~~~lv~e~~~~~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Ni 150 (355)
T cd07874 90 ----------------SLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 150 (355)
T ss_pred ----------------cccccceeEEEhhhhcccHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHE
Confidence 011234679999999888877764 3588999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
|+ +.++.+||+|||+++....... .....||..|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 151 ll---~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 219 (355)
T cd07874 151 VV---KSDCTLKILDFGLARTAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_pred EE---CCCCCEEEeeCcccccCCCccc--------cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99 4788999999999976543221 134578999999999999999999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHH-------------------------------------HhhccChHHHHHHHHHHhC
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIE-------------------------------------VLCKSHPAEFASYFHYCQS 283 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~-------------------------------------~~~~~~~~~~~~l~~~~l~ 283 (449)
+....... ..++........+ ......+.++++++..||.
T Consensus 220 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 296 (355)
T cd07874 220 GRDYIDQW---NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 296 (355)
T ss_pred CCCHHHHH---HHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhc
Confidence 75432221 1111111000000 0001123567889999999
Q ss_pred CCCCCCCCHHHHHH
Q 013125 284 LTFDQRPDYGFLKR 297 (449)
Q Consensus 284 ~~p~~Rp~~~~l~~ 297 (449)
.||.+||++.++.+
T Consensus 297 ~dP~~Rps~~ell~ 310 (355)
T cd07874 297 IDPAKRISVDEALQ 310 (355)
T ss_pred CCchhcCCHHHHhc
Confidence 99999999887644
No 117
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7.4e-39 Score=312.56 Aligned_cols=237 Identities=21% Similarity=0.310 Sum_probs=185.0
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||+||+|++..+++.||+|+++... ....+..|+.++..+ +|+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~i---------------------- 58 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL---------------------- 58 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcC----------------------
Confidence 47999999999999999999999999987531 122356777777665 55554
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
+.+..+....+..|+||||+ +++|...+.. ...++...++.++.||+.||+|||++||+||||||+|||+
T Consensus 59 -----v~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili--- 129 (329)
T cd05618 59 -----VGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL--- 129 (329)
T ss_pred -----CceeeEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---
Confidence 44444456678899999999 8888877764 5679999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.+||+|||+++....... ......||..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 130 ~~~~~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~ 202 (329)
T cd05618 130 DSEGHIKLTDYGMCKEGLRPGD-------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 202 (329)
T ss_pred CCCCCEEEeeCCccccccCCCC-------ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCc
Confidence 4788999999999875432221 123567899999999999999999999999999999999999999632111
Q ss_pred ------cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 246 ------TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 246 ------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
........+.......| ...+.++.+++..||..||.+||+.
T Consensus 203 ~~~~~~~~~~~~~~i~~~~~~~p-----~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 203 DNPDQNTEDYLFQVILEKQIRIP-----RSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCcccccHHHHHHHHhcCCCCCC-----CCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 11122223333333333 3457889999999999999999984
No 118
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.5e-38 Score=307.22 Aligned_cols=202 Identities=22% Similarity=0.310 Sum_probs=163.4
Q ss_pred eeeecccCceeEEEEEEc--CCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 12 GRKIGSGSFGEIFLASHV--DTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~--~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
+++||+|+||+||+|++. .+++.||+|++..........+|+++++.++|++++.+.....
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----------------- 68 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL----------------- 68 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEe-----------------
Confidence 578999999999999975 4678899999876555566889999999999998776543321
Q ss_pred CcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR--------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~--------~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
...+...|+||||++++|.+++.... ..++...++.++.||+.||+|||++||+||||||+|||
T Consensus 69 --------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil 140 (317)
T cd07868 69 --------SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANIL 140 (317)
T ss_pred --------cCCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEE
Confidence 12345789999999999988876431 24889999999999999999999999999999999999
Q ss_pred eecC-CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCC
Q 013125 162 MGLG-RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 162 l~~~-~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+... +..+.+||+|||+|+....... +........||+.|+|||++.+. .++.++||||+||++|||++|++||
T Consensus 141 ~~~~~~~~~~~kl~DfG~a~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f 216 (317)
T cd07868 141 VMGEGPERGRVKIADMGFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred EecCCCCcCcEEEeecCceeccCCCCc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCc
Confidence 9532 3567899999999987643321 11122356789999999999874 5899999999999999999999999
Q ss_pred CCC
Q 013125 240 QGL 242 (449)
Q Consensus 240 ~~~ 242 (449)
.+.
T Consensus 217 ~~~ 219 (317)
T cd07868 217 HCR 219 (317)
T ss_pred cCC
Confidence 753
No 119
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=7e-39 Score=312.00 Aligned_cols=233 Identities=23% Similarity=0.337 Sum_probs=186.7
Q ss_pred eeeecccCceeEEEEEEc---CCCceEEEEEecCC------CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 12 GRKIGSGSFGEIFLASHV---DTNEIVAVKIENSG------TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~---~~~~~vAvKv~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+++||+|+||.||+|++. .+++.||+|++... .....+..|+.+++.++|++++..+
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~-------------- 66 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLI-------------- 66 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhcee--------------
Confidence 468999999999999874 46889999987642 1123457899999999988755543
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
.....++..|+||||+ +++|.+.+.. ...+....++.++.||+.||+|||++||+||||||+|||
T Consensus 67 -------------~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil 132 (323)
T cd05584 67 -------------YAFQTGGKLYLILEYLSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENIL 132 (323)
T ss_pred -------------eEEecCCeEEEEEeCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 2334567889999999 8899888765 556889999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ +.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 133 ~---~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~ 202 (323)
T cd05584 133 L---DAQGHVKLTDFGLCKESIHEGT-------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTA 202 (323)
T ss_pred E---CCCCCEEEeeCcCCeecccCCC-------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCC
Confidence 9 4788999999999875433221 12346789999999999999999999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp 290 (449)
.... ..+..+.......+ ..+++++.+++..||..+|++||
T Consensus 203 ~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~ 243 (323)
T cd05584 203 ENRK---KTIDKILKGKLNLP-----PYLTPEARDLLKKLLKRNPSSRL 243 (323)
T ss_pred CCHH---HHHHHHHcCCCCCC-----CCCCHHHHHHHHHHcccCHhHcC
Confidence 5432 33334444333322 34578999999999999999999
No 120
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.4e-39 Score=320.05 Aligned_cols=267 Identities=22% Similarity=0.319 Sum_probs=199.4
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
+.|++++.||+|+||.||+|.+..+++.||||++... .....+..|+.++..++|++++..
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~-------------- 66 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKM-------------- 66 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeE--------------
Confidence 4799999999999999999999999999999998642 123346778888888887764443
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.......+..|+||||+ |++|.+++.. ...++...++.++.||+.||+|||++||+||||||+||
T Consensus 67 -------------~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NI 132 (360)
T cd05627 67 -------------FYSFQDKRNLYLIMEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNL 132 (360)
T ss_pred -------------EEEEEcCCEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHE
Confidence 33445678899999999 8899998875 45699999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccc----------------------------cccCCCCCCCCcccccccccc
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHI----------------------------PYRENKNLTGTARYASCNTHL 212 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~----------------------------~~~~~~~~~gt~~y~aPE~~~ 212 (449)
|+ +.++.++|+|||++............ ........+||+.|+|||++.
T Consensus 133 li---~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 209 (360)
T cd05627 133 LL---DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM 209 (360)
T ss_pred EE---CCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc
Confidence 99 47889999999998754322110000 000012457999999999999
Q ss_pred CCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhh--cCCCHHHhhccChHHHHHHHHHHhCCCCCCCC
Q 013125 213 GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK--VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290 (449)
Q Consensus 213 ~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp 290 (449)
+..++.++|||||||++|||++|..||.+.... ..+..+.... ...|.. ...++++.+++..++ .+|.+|+
T Consensus 210 ~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~---~~~~~i~~~~~~~~~p~~---~~~s~~~~~li~~l~-~~p~~R~ 282 (360)
T cd05627 210 QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ---ETYRKVMNWKETLVFPPE---VPISEKAKDLILRFC-TDSENRI 282 (360)
T ss_pred CCCCCCcceeccccceeeecccCCCCCCCCCHH---HHHHHHHcCCCceecCCC---CCCCHHHHHHHHHhc-cChhhcC
Confidence 999999999999999999999999999875543 2333333211 111211 124678999998876 4999998
Q ss_pred CHHHHHHHHHHHHHhcCCCCCccccccc
Q 013125 291 DYGFLKRLFHDLFSREGYDFDFVFDWTI 318 (449)
Q Consensus 291 ~~~~l~~~l~~~~~~~~~~~~~~~dw~~ 318 (449)
+...+.+.+ ...|....+|..
T Consensus 283 ~~~~~~ei~-------~hp~f~~~~~~~ 303 (360)
T cd05627 283 GSNGVEEIK-------SHPFFEGVDWGH 303 (360)
T ss_pred CCCCHHHHh-------cCCCCCCCCHHH
Confidence 643332222 234444566654
No 121
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=301.09 Aligned_cols=241 Identities=21% Similarity=0.322 Sum_probs=200.1
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
+.-+.|..++.||+|.||.|.+++.+.+++.+||||+++.- .....+.|-++|+..+|+-
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPF--------------- 229 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPF--------------- 229 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcH---------------
Confidence 34467899999999999999999999999999999987642 2223566777777766653
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
+-.+++.+...+..|+||||. ||.|.-.+.. .+.|++...+.+..+|+.||.|||+++||+||||.
T Consensus 230 ------------Lt~LKYsFQt~drlCFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKL 296 (516)
T KOG0690|consen 230 ------------LTSLKYSFQTQDRLCFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKL 296 (516)
T ss_pred ------------HHHhhhhhccCceEEEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechh
Confidence 333455566778999999999 8888777654 56799999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+|+|+ |++|++||+|||+++....... ..+++|||+.|+|||++....|++++|+|.+|+++|||++|++
T Consensus 297 ENLlL---DkDGHIKitDFGLCKE~I~~g~-------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRL 366 (516)
T KOG0690|consen 297 ENLLL---DKDGHIKITDFGLCKEEIKYGD-------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRL 366 (516)
T ss_pred hhhee---ccCCceEeeecccchhcccccc-------eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccC
Confidence 99999 6999999999999986443322 1368999999999999999999999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp 290 (449)
||..... ...+..|+...+..| ..+.++.+.|+.-.|..||.+|.
T Consensus 367 PFyn~dh---~kLFeLIl~ed~kFP-----r~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 367 PFYNKDH---EKLFELILMEDLKFP-----RTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred cccccch---hHHHHHHHhhhccCC-----ccCCHHHHHHHHHHhhcChHhhc
Confidence 9987433 345555666666666 34478999999999999999997
No 122
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.8e-39 Score=310.59 Aligned_cols=234 Identities=22% Similarity=0.318 Sum_probs=187.3
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||+||+|++..+++.||||++... .....+.+|+++++.+ +|++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~----------------------- 57 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPF----------------------- 57 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCC-----------------------
Confidence 4799999999999999999999999988743 1233456788888776 3554
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
++.+..+....+..|+||||+ +++|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 58 ----i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill--- 129 (318)
T cd05570 58 ----LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR-SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL--- 129 (318)
T ss_pred ----ccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---
Confidence 444444456677899999999 8899888765 4579999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
++++.++|+|||+++....... .....+||..|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~ 202 (318)
T cd05570 130 DSEGHIKIADFGMCKEGILGGV-------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED 202 (318)
T ss_pred CCCCcEEecccCCCeecCcCCC-------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH
Confidence 4788999999999875332221 113457899999999999999999999999999999999999999865432
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
..+..+.......+ ...+.++.+++..||..||.+||++
T Consensus 203 ---~~~~~i~~~~~~~~-----~~~~~~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 203 ---ELFQSILEDEVRYP-----RWLSKEAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred ---HHHHHHHcCCCCCC-----CcCCHHHHHHHHHHccCCHHHcCCC
Confidence 33333333333222 3457899999999999999999998
No 123
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.3e-39 Score=314.02 Aligned_cols=250 Identities=21% Similarity=0.266 Sum_probs=192.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.++||+|+||+||+|++..+++.||+|++... .....+..|+.++..++|+++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i----------------- 63 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWI----------------- 63 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCE-----------------
Confidence 4799999999999999999999999999999987532 112235667777777766653
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
..+..+....+..|+||||+ +++|.+++......++...++.++.||+.||+|||++||+||||||+||
T Consensus 64 ----------~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Ni 133 (332)
T cd05623 64 ----------TTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNI 133 (332)
T ss_pred ----------eeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHE
Confidence 33444556778899999999 8999999987667799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-----CCCCCccchHHHHHHHHHHHHhC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlG~il~el~~G 235 (449)
|+ +.++.+||+|||++......... ......||+.|+|||++. ...++.++|||||||++|||++|
T Consensus 134 li---~~~~~~kL~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g 204 (332)
T cd05623 134 LM---DMNGHIRLADFGSCLKLMEDGTV------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYG 204 (332)
T ss_pred EE---CCCCCEEEeecchheecccCCcc------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcC
Confidence 99 47889999999999765432221 112457999999999986 34588999999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCC--CCCHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQ--RPDYGFL 295 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~--Rp~~~~l 295 (449)
+.||.+.... +.+..+.......+.+..+...+.++.+++..|+..++.+ |+++.++
T Consensus 205 ~~Pf~~~~~~---~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~ 263 (332)
T cd05623 205 ETPFYAESLV---ETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDF 263 (332)
T ss_pred CCCCCCCCHH---HHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHH
Confidence 9999875432 3444444433333333333456889999999988764433 4555544
No 124
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.7e-38 Score=303.72 Aligned_cols=243 Identities=21% Similarity=0.301 Sum_probs=192.8
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+|+++++.++|.+++.
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~---------------- 64 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVN---------------- 64 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCcee----------------
Confidence 4889999999999999999999999999999876432 1223678999999998876443
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+..+...++..|+||||+ +++|.+++... ...+++..+..++.|++.||.|||+.||+||||||+||
T Consensus 65 -----------~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Ni 133 (285)
T cd05632 65 -----------LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENI 133 (285)
T ss_pred -----------EEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHE
Confidence 333445677899999999 78888777643 34699999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
++ ++.+.++|+|||++........ .....|+..|+|||++.+..++.++|+|||||++|||++|..||.
T Consensus 134 li---~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~ 202 (285)
T cd05632 134 LL---DDYGHIRISDLGLAVKIPEGES--------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFR 202 (285)
T ss_pred EE---CCCCCEEEecCCcceecCCCCc--------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence 99 4678999999999976533211 124578999999999999899999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
+.......+..... ............+.++.+++..||..+|++||+.
T Consensus 203 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05632 203 GRKEKVKREEVDRR----VLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGC 250 (285)
T ss_pred CCCHHHHHHHHHHh----hhccccccCccCCHHHHHHHHHHccCCHhHcCCC
Confidence 75443222222111 1111122334567889999999999999999994
No 125
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=272.50 Aligned_cols=283 Identities=22% Similarity=0.309 Sum_probs=212.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCch----hHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----QLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.+|...++||+|.||+||+|+...+++.||+|.+..+.+.+ ..++|+.+++.|+|.|++++..+.
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl----------- 70 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL----------- 70 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-----------
Confidence 46788899999999999999999999999999877654433 479999999999999998876543
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
..++...+|+|+|..+|..++..+++.++.+.++.++.|++.||.|+|+++++||||||+|+||
T Consensus 71 ----------------hsdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli 134 (292)
T KOG0662|consen 71 ----------------HSDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI 134 (292)
T ss_pred ----------------ccCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe
Confidence 3457889999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHh-CCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLR-GSLPWQ 240 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~-G~~pf~ 240 (449)
+.++.+||+|||+|+-+.- |.+.....+.|.+|++|.++.+.. |+...|+||.||++.|+.. |++.|.
T Consensus 135 ---n~ngelkladfglarafgi-------pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp 204 (292)
T KOG0662|consen 135 ---NRNGELKLADFGLARAFGI-------PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_pred ---ccCCcEEecccchhhhcCC-------ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC
Confidence 5899999999999986643 445556677899999999999987 8999999999999999997 899999
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCCCccccccccc
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILK 320 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~dw~~l~ 320 (449)
|....+....+..++ ..|.+..|.++. .+ .|..--|.|.....+ -++....+..-.+.+. +.++
T Consensus 205 g~dvddqlkrif~~l----g~p~ed~wps~t----~l------pdyk~yp~ypattsw-sqivp~lns~grdllq-kll~ 268 (292)
T KOG0662|consen 205 GNDVDDQLKRIFRLL----GTPTEDQWPSMT----KL------PDYKPYPIYPATTSW-SQIVPKLNSTGRDLLQ-KLLK 268 (292)
T ss_pred CCcHHHHHHHHHHHh----CCCccccCCccc----cC------CCCcccCCccccchH-HHHhhhhcchhHHHHH-HHhc
Confidence 866554444333322 333333332211 00 111222222111110 1111111111111111 5677
Q ss_pred ccccccccccccCCCCccccCC
Q 013125 321 YQQTQKTKSQDLLPASRVTNSR 342 (449)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~ 342 (449)
.+|.++.++..+++|++++...
T Consensus 269 cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 269 CNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred cCcccccCHHHHhcCccccccC
Confidence 8888888888888888886543
No 126
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.6e-38 Score=301.51 Aligned_cols=257 Identities=18% Similarity=0.225 Sum_probs=199.2
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCc----eEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~----~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
-.++|++.+.||+|+||+||+|.+..+++ .|++|.+...... .++..|+.++..+.|++++..++.
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~------- 77 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGI------- 77 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEE-------
Confidence 45789999999999999999999977766 4777776543221 235566667777778776655442
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.. +...++++|++ +++|.+++......+++..++.++.||+.||+|||++|++|||||
T Consensus 78 --------------------~~-~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlk 136 (279)
T cd05111 78 --------------------CP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLA 136 (279)
T ss_pred --------------------EC-CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccC
Confidence 22 34467889988 899999998767789999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-C
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-G 235 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G 235 (449)
|+|||+ +.++.+||+|||+++......... ......++..|++||.+.+..++.++|||||||++|||++ |
T Consensus 137 p~nili---~~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g 208 (279)
T cd05111 137 ARNILL---KSDSIVQIADFGVADLLYPDDKKY-----FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYG 208 (279)
T ss_pred cceEEE---cCCCcEEEcCCccceeccCCCccc-----ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCC
Confidence 999999 478899999999998664332111 0123456778999999998899999999999999999998 9
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 304 (449)
..||.+..... +..+.......+.+. .++..+.+++..||..+|.+||++.++.+.|..+..
T Consensus 209 ~~p~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 209 AEPYAGMRPHE----VPDLLEKGERLAQPQ---ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCCCCCCHHH----HHHHHHCCCcCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 99998765432 223333333222222 246789999999999999999999999988877654
No 127
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-38 Score=309.41 Aligned_cols=235 Identities=23% Similarity=0.339 Sum_probs=185.2
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||+||+|++..+++.||||+++.. ........|..++..+ +|++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~----------------------- 57 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF----------------------- 57 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCc-----------------------
Confidence 4799999999999999999999999988653 1223455676666643 5555
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
++.+..+....+..|+||||+ +++|.+++.. ...+++.++..++.||+.||+|||++||+||||||+|||+
T Consensus 58 ----iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~--- 129 (316)
T cd05619 58 ----LTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL--- 129 (316)
T ss_pred ----CcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---
Confidence 444444456677899999999 8899988875 4568999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.+||+|||+++....... ......||..|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~ 202 (316)
T cd05619 130 DTDGHIKIADFGMCKENMLGDA-------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE 202 (316)
T ss_pred CCCCCEEEccCCcceECCCCCC-------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH
Confidence 4778999999999875332211 123567899999999999999999999999999999999999999875432
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
+.+..+.......+ ...+.++.+++..||..+|.+||++.
T Consensus 203 ---~~~~~i~~~~~~~~-----~~~~~~~~~li~~~l~~~P~~R~~~~ 242 (316)
T cd05619 203 ---ELFQSIRMDNPCYP-----RWLTREAKDILVKLFVREPERRLGVK 242 (316)
T ss_pred ---HHHHHHHhCCCCCC-----ccCCHHHHHHHHHHhccCHhhcCCCh
Confidence 23333322221111 23578899999999999999999975
No 128
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.2e-40 Score=305.20 Aligned_cols=245 Identities=22% Similarity=0.352 Sum_probs=209.5
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc-----hhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-----PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~-----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
+.-||++.+.||+|.||.|-+|+....|+.||||.+.++.-. -.+.+|++||..|+|++++..+.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyE---------- 120 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYE---------- 120 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhh----------
Confidence 346899999999999999999999999999999987765322 23789999999999998665433
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
-+.+.+..+|||||. +|.|.|++..+ +.+++.+++.+++||..|+.|+|..+++|||||.+
T Consensus 121 -----------------VFENkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLE 182 (668)
T KOG0611|consen 121 -----------------VFENKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLE 182 (668)
T ss_pred -----------------hhcCCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhccceecccchh
Confidence 246778899999999 99999999874 56999999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlG~il~el~~G~~ 237 (449)
|||+ |.++++||+|||++-.+....- -.++||++-|.+||++.|.+| +..+|-||||++||-|++|..
T Consensus 183 NILL---D~N~NiKIADFGLSNly~~~kf--------LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtM 251 (668)
T KOG0611|consen 183 NILL---DQNNNIKIADFGLSNLYADKKF--------LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTM 251 (668)
T ss_pred heee---cCCCCeeeeccchhhhhccccH--------HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhccc
Confidence 9999 6899999999999987766543 258899999999999999997 789999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
||.|.+ ....+..|..+.+..|. -|.+..-||..+|..||++|.+.++|..
T Consensus 252 PFDG~D---hk~lvrQIs~GaYrEP~------~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 252 PFDGRD---HKRLVRQISRGAYREPE------TPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred ccCCch---HHHHHHHhhcccccCCC------CCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 998843 34556666666555542 2667889999999999999999888765
No 129
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=6.1e-39 Score=317.75 Aligned_cols=252 Identities=21% Similarity=0.286 Sum_probs=194.1
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
+..++|++.+.||+|+||.||+|++..+++.||+|++... .....+..|+.+++.++|++++..+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~---------- 109 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF---------- 109 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEE----------
Confidence 3457899999999999999999999999999999987642 1223467889999998888755543
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
.+...+...|+||||+ +++|.+++.. ..++..+++.++.||+.||+|||++||+||||||
T Consensus 110 -----------------~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp 170 (370)
T cd05621 110 -----------------CAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKP 170 (370)
T ss_pred -----------------EEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence 3345677899999999 8999998864 4689999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC----CCccchHHHHHHHHHHHH
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE----QSRRDDLESLGYVLLYFL 233 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~DvwSlG~il~el~ 233 (449)
+|||+ ++.+.+||+|||+|......... ......||+.|+|||++.+.. ++.++|||||||++|||+
T Consensus 171 ~NILl---~~~~~~kL~DFG~a~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell 241 (370)
T cd05621 171 DNMLL---DKHGHLKLADFGTCMKMDETGMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 241 (370)
T ss_pred HHEEE---CCCCCEEEEecccceecccCCce------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHH
Confidence 99999 47899999999999876432211 123567999999999987643 789999999999999999
Q ss_pred hCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCC--CCCHHHHHH
Q 013125 234 RGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQ--RPDYGFLKR 297 (449)
Q Consensus 234 ~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~--Rp~~~~l~~ 297 (449)
+|..||.+.... ..+..+.........+. ....+..+++++..|+..++.+ |+++.++.+
T Consensus 242 ~G~~Pf~~~~~~---~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 242 VGDTPFYADSLV---GTYSKIMDHKNSLNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred hCCCCCCCCCHH---HHHHHHHhCCcccCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 999999875432 33444443222111111 1234678899999999744432 667665533
No 130
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1e-38 Score=311.60 Aligned_cols=237 Identities=20% Similarity=0.308 Sum_probs=186.1
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||.||+|++..+++.||+|+++... ....+..|..+++.+ +|++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~----------------------- 57 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPF----------------------- 57 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCC-----------------------
Confidence 46899999999999999999999999987531 122366788888777 4554
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
++.+..+....+..|+||||+ +++|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 58 ----Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili--- 129 (329)
T cd05588 58 ----LVGLHSCFQTESRLFFVIEFVSGGDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL--- 129 (329)
T ss_pred ----CCceEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---
Confidence 444444556678899999999 8899887764 5679999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+..+.+||+|||+++....... ......||..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 130 ~~~~~~kL~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~ 202 (329)
T cd05588 130 DAEGHIKLTDYGMCKEGIRPGD-------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMS 202 (329)
T ss_pred CCCCCEEECcCccccccccCCC-------ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccc
Confidence 4788999999999874322211 123567899999999999999999999999999999999999999642211
Q ss_pred ------cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 246 ------TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 246 ------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
........+.......| ..++.++.+++..||..||.+|++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~p-----~~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 203 DNPDQNTEDYLFQVILEKQIRIP-----RSLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred ccccccchHHHHHHHHcCCCCCC-----CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 11122233333333322 3457889999999999999999984
No 131
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.3e-38 Score=303.73 Aligned_cols=236 Identities=21% Similarity=0.289 Sum_probs=185.3
Q ss_pred ecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 15 LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
||+|+||+||+|.+..+++.||+|++.... ....+..|+++++.++|++++..
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~---------------------- 58 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSL---------------------- 58 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeee----------------------
Confidence 799999999999999999999999876432 12345779999999988765543
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
..+.......|+||||+ +++|.+.+... ...+++..++.++.||+.||+|||++||+||||||+||++
T Consensus 59 -----~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili--- 130 (280)
T cd05608 59 -----AYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL--- 130 (280)
T ss_pred -----eEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---
Confidence 23334567789999999 88998776432 3468999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.++|+|||++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 131 ~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~ 203 (280)
T cd05608 131 DNDGNVRISDLGLAVELKDGQSK-------TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 203 (280)
T ss_pred CCCCCEEEeeCccceecCCCCcc-------ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 47789999999999766543221 23557899999999999999999999999999999999999999864332
Q ss_pred cH-HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 246 TK-KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 246 ~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
.. ......+... + .......+.++.+++..||..||++||++
T Consensus 204 ~~~~~~~~~~~~~----~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (280)
T cd05608 204 VENKELKQRILND----S-VTYPDKFSPASKSFCEALLAKDPEKRLGF 246 (280)
T ss_pred hhHHHHHHhhccc----C-CCCcccCCHHHHHHHHHHhcCCHHHhcCC
Confidence 11 1111122111 1 11223468899999999999999999954
No 132
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.4e-38 Score=298.11 Aligned_cols=248 Identities=19% Similarity=0.324 Sum_probs=194.2
Q ss_pred eecccCceeEEEEEEc--CCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccC
Q 013125 14 KIGSGSFGEIFLASHV--DTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTL 88 (449)
Q Consensus 14 ~LG~G~fg~Vy~a~~~--~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (449)
.||+|+||.||+|.+. .++..||+|+...... .+.+.+|+.+++.++|++++..++.+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~----------------- 64 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVC----------------- 64 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEE-----------------
Confidence 4899999999999875 4456799998875433 23578999999999999877665432
Q ss_pred CCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCC
Q 013125 89 GGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 167 (449)
Q Consensus 89 ~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~ 167 (449)
.....++||||+ +++|.+++......+++..++.++.||+.||+|||++|++||||||+|||+. .
T Consensus 65 -----------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~ 130 (257)
T cd05115 65 -----------EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---N 130 (257)
T ss_pred -----------cCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---C
Confidence 234678999999 8899998876566799999999999999999999999999999999999994 7
Q ss_pred CCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChhhc
Q 013125 168 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAAT 246 (449)
Q Consensus 168 ~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~~~ 246 (449)
++.+||+|||++.......... .......++..|+|||++.+..++.++|||||||++||+++ |..||.+.....
T Consensus 131 ~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 206 (257)
T cd05115 131 QHYAKISDFGLSKALGADDSYY----KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE 206 (257)
T ss_pred CCcEEeccCCccccccCCccce----eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence 7899999999997654332210 11112234578999999998889999999999999999996 999998765432
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~ 303 (449)
. ...+ ......+ .....++++.+++..||..+|++||++.+|.+.|+.++
T Consensus 207 ~---~~~~-~~~~~~~---~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 207 V---MSFI-EQGKRLD---CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred H---HHHH-HCCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 2 2222 2222212 12345789999999999999999999999999888653
No 133
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.1e-38 Score=298.59 Aligned_cols=255 Identities=25% Similarity=0.345 Sum_probs=200.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.+.||+|+||.||+|++..+++.||||.+..... ...+.+|+++++.++|++++..+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~------------ 69 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLD------------ 69 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeee------------
Confidence 689999999999999999999999999999997654211 224678999999999887554432
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
++...+..++|+||+ +++|.+++... ...++...++.++.||+.||+|||++|++|+||||
T Consensus 70 ---------------~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~ 134 (267)
T cd08228 70 ---------------SFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKP 134 (267)
T ss_pred ---------------eEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCH
Confidence 334567889999999 78998887642 34588999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+||+++ .++.++|+|||++......... .....++..|+|||.+.+..++.++|+||||+++|||++|..
T Consensus 135 ~nil~~---~~~~~~l~d~g~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~ 204 (267)
T cd08228 135 ANVFIT---ATGVVKLGDLGLGRFFSSKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 204 (267)
T ss_pred HHEEEc---CCCCEEECccccceeccchhHH-------HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCC
Confidence 999994 6788999999999876433211 124568889999999998889999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
||...... .......+.. ....+ ......+..+.+++.+||..+|++||++.++.+.|+.+
T Consensus 205 p~~~~~~~-~~~~~~~~~~-~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 205 PFYGDKMN-LFSLCQKIEQ-CDYPP--LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CCcccccc-HHHHHHHHhc-CCCCC--CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 99754321 1222222221 11111 11233468899999999999999999999999888754
No 134
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.2e-38 Score=316.56 Aligned_cols=258 Identities=20% Similarity=0.240 Sum_probs=193.8
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.|+++++||+|+||.||+|.+..+++.||||++.... ....+.+|+++++.++|++++..+.......
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 72 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPH-------- 72 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCC--------
Confidence 4789999999999999999999999999999876432 1235788999999999998776544321110
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
.......|+|+||++++|.+.+.. ...++...++.++.||+.||+|||++||+||||||+|||+
T Consensus 73 --------------~~~~~~~~lv~e~~~~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili- 136 (372)
T cd07853 73 --------------IDPFEEIYVVTELMQSDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV- 136 (372)
T ss_pred --------------ccccceEEEEeeccccCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE-
Confidence 001136799999998888887754 5679999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+.++.+||+|||+++........ ......+|..|+|||++.+. .++.++|||||||++|||++|+.||.+.
T Consensus 137 --~~~~~~kL~Dfg~a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 208 (372)
T cd07853 137 --NSNCVLKICDFGLARVEEPDESK------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208 (372)
T ss_pred --CCCCCEEeccccceeecccCccc------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence 47889999999999865433211 11234678999999999875 4799999999999999999999999876
Q ss_pred hhhcHHHHHHHHHH--------------------hhcCCC-HH---HhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICE--------------------KKVSTP-IE---VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~--------------------~~~~~~-~~---~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
........+..... .....+ .. ......++++.+++..||..||.+||++.++.+
T Consensus 209 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 209 SPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 54432222211100 000001 00 011234678889999999999999999877643
No 135
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-38 Score=302.08 Aligned_cols=256 Identities=20% Similarity=0.281 Sum_probs=199.6
Q ss_pred CCcccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 1 ~~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
|.+...++|++.++||+|+||.||+|++..+++.||+|++..... ...+.+|+.+++.++|++++....
T Consensus 3 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~--------- 73 (267)
T cd06646 3 LRRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFG--------- 73 (267)
T ss_pred cccCchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeE---------
Confidence 345567889999999999999999999998999999999865432 334678999999998887555433
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
.+...+..++||||+ +++|.+++.. ...++...+..++.|++.||+|||+.||+||||||
T Consensus 74 ------------------~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p 134 (267)
T cd06646 74 ------------------SYLSREKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKG 134 (267)
T ss_pred ------------------EEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence 334567889999999 7889888765 45789999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc---CCCCCccchHHHHHHHHHHHHh
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlG~il~el~~ 234 (449)
+||++ ++.+.++|+|||++........ ......++..|+|||.+. ...++.++|||||||++|||++
T Consensus 135 ~nill---~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~ 204 (267)
T cd06646 135 ANILL---TDNGDVKLADFGVAAKITATIA-------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAE 204 (267)
T ss_pred HHEEE---CCCCCEEECcCccceeeccccc-------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHh
Confidence 99999 4778899999999987643221 123456889999999875 3447889999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|..||....... ....+.......+........+..+.+++..||..+|++||++++|.+
T Consensus 205 g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 205 LQPPMFDLHPMR---ALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred CCCCccccchhh---hheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence 999997544321 111111122222221122345789999999999999999999988754
No 136
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.2e-38 Score=315.99 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=194.7
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
++..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+|+.+++.++|++++..
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~---------- 108 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL---------- 108 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeE----------
Confidence 345689999999999999999999999999999999875321 12236678888888888765544
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
......+...|+||||+ +++|.+++.. ..++...++.++.||+.||+|||++||+|||||
T Consensus 109 -----------------~~~~~~~~~~~lv~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLk 169 (371)
T cd05622 109 -----------------FYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVK 169 (371)
T ss_pred -----------------EEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCC
Confidence 33445678899999999 8899998864 458999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC----CCccchHHHHHHHHHHH
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE----QSRRDDLESLGYVLLYF 232 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~DvwSlG~il~el 232 (449)
|+|||++ .++.+||+|||+++........ ......||+.|+|||++.+.. ++.++|||||||++|||
T Consensus 170 p~NIll~---~~~~ikL~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyel 240 (371)
T cd05622 170 PDNMLLD---KSGHLKLADFGTCMKMNKEGMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240 (371)
T ss_pred HHHEEEC---CCCCEEEEeCCceeEcCcCCcc------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHH
Confidence 9999994 7889999999999876433211 123567999999999987643 78999999999999999
Q ss_pred HhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCC---CCCHHHHHH
Q 013125 233 LRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQ---RPDYGFLKR 297 (449)
Q Consensus 233 ~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~---Rp~~~~l~~ 297 (449)
++|..||.+.... ..+..+.........+. ....+.++++++..|+. ++.. |++++++.+
T Consensus 241 l~G~~Pf~~~~~~---~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 241 LVGDTPFYADSLV---GTYSKIMNHKNSLTFPD-DNDISKEAKNLICAFLT-DREVRLGRNGVEEIKR 303 (371)
T ss_pred HhCCCCCCCCCHH---HHHHHHHcCCCcccCCC-cCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhc
Confidence 9999999875432 33444443221111111 13457899999999998 5554 566665543
No 137
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.8e-38 Score=302.27 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=191.6
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.|++.+.||+|+||+||+|.+..+++.||+|.+..... ...+.+|+.+++.++|.+++..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~--------------- 65 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSL--------------- 65 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeee---------------
Confidence 48899999999999999999999999999998754321 2246789999999988765443
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
...+...+..|+||||+ +++|.+++... ...++...++.++.|++.||.|||++||+||||||+||
T Consensus 66 ------------~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Ni 133 (285)
T cd05630 66 ------------AYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENI 133 (285)
T ss_pred ------------eEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHE
Confidence 33334567899999999 88998887543 34689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
++ ++.+.++|+|||++........ .....|+..|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 134 l~---~~~~~~~l~Dfg~~~~~~~~~~--------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~ 202 (285)
T cd05630 134 LL---DDHGHIRISDLGLAVHVPEGQT--------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 202 (285)
T ss_pred EE---CCCCCEEEeeccceeecCCCcc--------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence 99 4778899999999876433221 124578999999999999999999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
.............+... .........++++.+++..||..||.+||+
T Consensus 203 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~R~s 249 (285)
T cd05630 203 QRKKKIKREEVERLVKE----VQEEYSEKFSPDARSLCKMLLCKDPKERLG 249 (285)
T ss_pred CCCccchHHHHHhhhhh----hhhhcCccCCHHHHHHHHHHhhcCHHHccC
Confidence 75432222222222111 111223456788999999999999999998
No 138
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-40 Score=307.96 Aligned_cols=247 Identities=21% Similarity=0.277 Sum_probs=204.8
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
+-.+.|+.-+.||+||||+||-++...||+.+|+|.+.+. ......++|.+++.+++.+
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~---------------- 245 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSP---------------- 245 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccC----------------
Confidence 3456789999999999999999999999999999965432 3333468899999888765
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.|+.+-+.....+..|+|+.+| ||+|.-.+-..+ ..|+++.++.++.+|++||++||..+||+||||
T Consensus 246 -----------FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLK 314 (591)
T KOG0986|consen 246 -----------FIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLK 314 (591)
T ss_pred -----------cEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCC
Confidence 3445556667889999999999 899887765444 469999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCC
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
|+|||+ |+.|+|+|+|+|+|..+...... ...+||..|||||++.+..|+...|+|||||++|||+.|+
T Consensus 315 PeNILL---Dd~GhvRISDLGLAvei~~g~~~--------~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~ 383 (591)
T KOG0986|consen 315 PENILL---DDHGHVRISDLGLAVEIPEGKPI--------RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGH 383 (591)
T ss_pred hhheee---ccCCCeEeeccceEEecCCCCcc--------ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHccc
Confidence 999999 69999999999999987765432 3669999999999999999999999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
.||.........+.+.+ .......++...++++.+++.+..|..||.+|...
T Consensus 384 sPFr~~KeKvk~eEvdr----r~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 384 SPFRQRKEKVKREEVDR----RTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred CchhhhhhhhhHHHHHH----HHhcchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 99987665444433322 22333455557788999999999999999999854
No 139
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.4e-38 Score=301.22 Aligned_cols=260 Identities=23% Similarity=0.304 Sum_probs=197.4
Q ss_pred CCce-EEeeeecccCceeEEEEEE----cCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 6 GVKY-KLGRKIGSGSFGEIFLASH----VDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 6 ~~~y-~i~~~LG~G~fg~Vy~a~~----~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
.+|| ++.+.||+|+||+||++.. ..+++.||+|++..... ...+.+|+++++.++|++++...+.+.
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----- 76 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCS----- 76 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----
Confidence 4566 9999999999999988753 35677899999875432 345788999999999988666544321
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.......++||||+ +++|.+++.. ..+++.+++.++.|++.||+|||++||+|||||
T Consensus 77 --------------------~~~~~~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlk 134 (283)
T cd05080 77 --------------------EQGGKGLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLA 134 (283)
T ss_pred --------------------cCCCceEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccC
Confidence 12345679999999 8899988864 459999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCC
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
|+|||++ .++.++|+|||+++........ +.......++..|++||.+.+..++.++|||||||++|||++|.
T Consensus 135 p~Nili~---~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~ 207 (283)
T cd05080 135 ARNVLLD---NDRLVKIGDFGLAKAVPEGHEY----YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHC 207 (283)
T ss_pred hheEEEc---CCCcEEEeecccccccCCcchh----hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCC
Confidence 9999994 6789999999999866543211 11112334567799999999888999999999999999999999
Q ss_pred CCCCCChhhcH-----------HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 237 LPWQGLKAATK-----------KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 237 ~pf~~~~~~~~-----------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
.||........ ...+..........+ ....+|.++.+++..||..+|++||+++++.+.|+++
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 208 DSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLP---CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCC---CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 99865321100 001111111111111 1234578999999999999999999999999988765
No 140
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.7e-38 Score=302.47 Aligned_cols=254 Identities=22% Similarity=0.334 Sum_probs=200.7
Q ss_pred cCCceEEeeeecccCceeEEEEEEcC-----CCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
-.++|.+.+.||+|+||.||+|.+.. +++.||+|+++..... ..+.+|+++++.++|++++...
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~-------- 74 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFY-------- 74 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchhee--------
Confidence 35789999999999999999998743 3578999998765433 4688999999999988755443
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-------------CCCCHHHHHHHHHHHHHHH
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-------------RKFSLKTVLMLADQMIARI 142 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-------------~~~~~~~~~~i~~qil~~L 142 (449)
.+.......++||||+ +++|.+++...+ ..+++..+..++.||+.||
T Consensus 75 -------------------~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l 135 (280)
T cd05049 75 -------------------GVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGM 135 (280)
T ss_pred -------------------eEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHH
Confidence 3345567889999999 899999886432 3478889999999999999
Q ss_pred HHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchH
Q 013125 143 EYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDL 222 (449)
Q Consensus 143 ~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv 222 (449)
.|||++|++||||||+||+++ .++.++|+|||++......... .......++..|+|||++.+..++.++||
T Consensus 136 ~~lH~~~i~h~dlkp~nili~---~~~~~kl~d~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 207 (280)
T cd05049 136 VYLASQHFVHRDLATRNCLVG---YDLVVKIGDFGMSRDVYTTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDV 207 (280)
T ss_pred HHHhhCCeeccccccceEEEc---CCCeEEECCcccceecccCcce-----ecCCCCcccceecChhhhccCCcchhhhH
Confidence 999999999999999999994 7799999999999765332211 11233456788999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 223 ESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 223 wSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
|||||++|||++ |..||.+..... ....+.......+ ....+..+.+++..||..+|.+||++.++.+.|+
T Consensus 208 ~slG~il~e~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 208 WSFGVVLWEIFTYGKQPWYGLSNEE---VIECITQGRLLQR----PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHcCCcCCC----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 999999999998 999998755432 2222322222221 1345789999999999999999999999988764
No 141
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.1e-38 Score=296.79 Aligned_cols=254 Identities=22% Similarity=0.379 Sum_probs=202.2
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
+|..+.|+++++||+|+||.||+|.+. +++.||+|.+..... ...+.+|+.+++.++|++++.....
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~----------- 69 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAV----------- 69 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEE-----------
Confidence 467889999999999999999999864 567899998875433 3468899999999999876554322
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
. ..+..+++||++ +++|.+++... +..++..+++.++.|++.||+|||+.|++||||||+|
T Consensus 70 ----------------~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~n 132 (260)
T cd05067 70 ----------------V-TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAAN 132 (260)
T ss_pred ----------------E-ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHh
Confidence 1 235679999999 88999987643 3568999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLP 238 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~p 238 (449)
|+++ +++.++|+|||++......... ......++..|+|||++.+..++.++||||||+++|||++ |.+|
T Consensus 133 i~i~---~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p 203 (260)
T cd05067 133 ILVS---ETLCCKIADFGLARLIEDNEYT------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIP 203 (260)
T ss_pred EEEc---CCCCEEEccCcceeecCCCCcc------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCC
Confidence 9994 7889999999999766532211 1123456778999999998889999999999999999999 9999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
|.+...... ...+ ......+ .....+.++.+++.+||..+|++||++++|.+.|+.
T Consensus 204 ~~~~~~~~~---~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 204 YPGMTNPEV---IQNL-ERGYRMP---RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCChHHH---HHHH-HcCCCCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 987554322 2222 2222222 224457899999999999999999999999888764
No 142
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.5e-38 Score=303.17 Aligned_cols=254 Identities=20% Similarity=0.263 Sum_probs=196.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.++||.|+||.||+|.+..+++.||+|.+..... ...+.+|+.+++.++|++++...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~--------------- 70 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH--------------- 70 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEE---------------
Confidence 679999999999999999999999999999998764322 23467899999999988755543
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
.+....+..|+||||+.++|.+++......++...++.++.||+.||+|||+.||+||||||+|||+
T Consensus 71 ------------~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~- 137 (301)
T cd07873 71 ------------DIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI- 137 (301)
T ss_pred ------------EEEecCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE-
Confidence 3345667899999999889999887766779999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+.++.++|+|||++........ ......++..|+|||++.+. .++.++|||||||++|||++|++||.+.
T Consensus 138 --~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~ 208 (301)
T cd07873 138 --NERGELKLADFGLARAKSIPTK-------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGS 208 (301)
T ss_pred --CCCCcEEECcCcchhccCCCCC-------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4778999999999875433221 11234568899999998764 4789999999999999999999999875
Q ss_pred hhhcHHHHHHHHHHhhc----------------CCC------HHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKV----------------STP------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~----------------~~~------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
........+..+..... ..+ ........+..+++++.+|+..||.+||+++++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 209 TVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred CHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 54322222211111000 000 11122345778899999999999999999887744
No 143
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5e-38 Score=300.96 Aligned_cols=261 Identities=23% Similarity=0.339 Sum_probs=204.8
Q ss_pred ccCCceEEeeeecccCceeEEEEEEc-----CCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
|-...|.+.+.||+|+||+||+|.+. .++..||+|.+..... ...+.+|+++++.++|++++...
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-------- 73 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFY-------- 73 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEE--------
Confidence 34678999999999999999999863 3456699998765432 33578899999999988755443
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHH
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR------------RKFSLKTVLMLADQMIARIE 143 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~------------~~~~~~~~~~i~~qil~~L~ 143 (449)
.++...+..++||||+ +++|.+++.... ..+++.+++.++.||+.||+
T Consensus 74 -------------------~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~ 134 (288)
T cd05093 74 -------------------GVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMV 134 (288)
T ss_pred -------------------EEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3445667889999999 899999886432 24899999999999999999
Q ss_pred HHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHH
Q 013125 144 YVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLE 223 (449)
Q Consensus 144 ~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dvw 223 (449)
|||++|++||||||+|||+ ++++.++|+|||+++....... +.......++..|+|||++.+..++.++|||
T Consensus 135 ~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiw 206 (288)
T cd05093 135 YLASQHFVHRDLATRNCLV---GENLLVKIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVW 206 (288)
T ss_pred HHHhCCeeecccCcceEEE---ccCCcEEeccCCccccccCCce-----eecCCCCCccccccCHHHhccCCCCchhhHH
Confidence 9999999999999999999 4788999999999976543221 1112234457789999999998899999999
Q ss_pred HHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 224 SLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 224 SlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
||||++|+|++ |..||....... ....+....... .....+.++.+++..||..+|.+||++.++...|+++
T Consensus 207 slG~il~~l~t~g~~p~~~~~~~~---~~~~i~~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 207 SLGVVLWEIFTYGKQPWYQLSNNE---VIECITQGRVLQ----RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCCcCC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 99999999998 999998765432 233333322111 1234578999999999999999999999999999888
Q ss_pred HHhc
Q 013125 303 FSRE 306 (449)
Q Consensus 303 ~~~~ 306 (449)
.+..
T Consensus 280 ~~~~ 283 (288)
T cd05093 280 AKAS 283 (288)
T ss_pred HHhc
Confidence 7643
No 144
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.6e-38 Score=301.14 Aligned_cols=258 Identities=20% Similarity=0.304 Sum_probs=199.8
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcC-----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHV 75 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 75 (449)
+-+++|++.+.||+|+||.||+|.+.. ++..||+|....... ...+.+|+.+++.++|+++++.+.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~------ 76 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIG------ 76 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEE------
Confidence 456889999999999999999999976 678899998764432 234788999999999887655443
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR------RKFSLKTVLMLADQMIARIEYVHSR 148 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~------~~~~~~~~~~i~~qil~~L~~LH~~ 148 (449)
++......++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++
T Consensus 77 ---------------------~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 135 (277)
T cd05036 77 ---------------------VSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN 135 (277)
T ss_pred ---------------------EEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 334556779999999 899999987543 2589999999999999999999999
Q ss_pred CccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHH
Q 013125 149 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYV 228 (449)
Q Consensus 149 giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~i 228 (449)
+++||||||+||++........+||+|||+++........ ........+..|+|||++.+..++.++|||||||+
T Consensus 136 ~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i 210 (277)
T cd05036 136 HFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY-----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVL 210 (277)
T ss_pred CEeecccchheEEEeccCCCcceEeccCccccccCCccce-----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHH
Confidence 9999999999999964333457999999999866332211 11122234568999999998899999999999999
Q ss_pred HHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 229 LLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 229 l~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
+|||++ |..||.+..... ....+.. .... .....+|..+.+++..||..+|++||++.+|.+.|.
T Consensus 211 l~el~~~g~~pf~~~~~~~---~~~~~~~-~~~~---~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 211 LWEIFSLGYMPYPGRTNQE---VMEFVTG-GGRL---DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHcCCCCCCCCCCHHH---HHHHHHc-CCcC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 999997 999998754432 2222221 1111 112455889999999999999999999999887764
No 145
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.6e-38 Score=323.44 Aligned_cols=250 Identities=19% Similarity=0.211 Sum_probs=199.7
Q ss_pred CCceEEeeeecccCceeEEEEEEcCC-CceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDT-NEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~-~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
...|.+.+.||+|+||.||+|.+..+ ++.||+|.+..... ...+.+|+.+++.++|+++++.+.
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~------------- 132 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFD------------- 132 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEE-------------
Confidence 34599999999999999999998777 78899997654322 224677999999999987665543
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
++...+..||||||+ +++|.+++... ...++...+..++.||+.||+|||++||+||||||+
T Consensus 133 --------------~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~ 198 (478)
T PTZ00267 133 --------------DFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSA 198 (478)
T ss_pred --------------EEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHH
Confidence 345667899999999 89999887542 345899999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
|||+ +..+.+||+|||+++.+...... ......+||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 199 NIll---~~~~~~kL~DFgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~P 270 (478)
T PTZ00267 199 NIFL---MPTGIIKLGDFGFSKQYSDSVSL-----DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRP 270 (478)
T ss_pred hEEE---CCCCcEEEEeCcCceecCCcccc-----ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCC
Confidence 9999 47889999999999876543211 112456799999999999999999999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|.+.... +.+..+....... ....++.++.+++..||..+|.+||++.++..
T Consensus 271 f~~~~~~---~~~~~~~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 271 FKGPSQR---EIMQQVLYGKYDP----FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCCCHH---HHHHHHHhCCCCC----CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 9875432 3333333332221 11345789999999999999999999988754
No 146
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-38 Score=320.70 Aligned_cols=198 Identities=25% Similarity=0.310 Sum_probs=167.6
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+.+..|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+++++.|+|++++.++.
T Consensus 166 ~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~HpnIv~l~~-------------- 227 (461)
T PHA03211 166 VAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLSHPAVLALLD-------------- 227 (461)
T ss_pred cccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCCCCCCCcEEE--------------
Confidence 35678999999999999999999999999999999632 234678999999999988666543
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
++..+...|+|||++.++|.+++......+++.+++.++.||+.||+|||++||+||||||+|||++
T Consensus 228 -------------~~~~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~ 294 (461)
T PHA03211 228 -------------VRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN 294 (461)
T ss_pred -------------EEEECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC
Confidence 3345678899999998899988876566799999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
..+.+||+|||+++......... ......||..|+|||++.+..++.++|||||||++|||++|..++.
T Consensus 295 ---~~~~vkL~DFGla~~~~~~~~~~-----~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 295 ---GPEDICLGDFGAACFARGSWSTP-----FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred ---CCCCEEEcccCCceecccccccc-----cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 77899999999998654322110 1135679999999999999999999999999999999999876554
No 147
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=9.3e-39 Score=311.40 Aligned_cols=236 Identities=23% Similarity=0.308 Sum_probs=184.7
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHH-HHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAK-VYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||+||+|++..+++.||+|++.... ....+..|.. +++.++|+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~I---------------------- 58 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL---------------------- 58 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCC----------------------
Confidence 47999999999999999999999999986431 1112333333 3455666654
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
..+..++...+..|+||||+ +++|.+++.. ...++...++.++.||+.||+|||++||+||||||+|||+
T Consensus 59 -----v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili--- 129 (325)
T cd05602 59 -----VGLHFSFQTADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL--- 129 (325)
T ss_pred -----CceeEEEEcCCeEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---
Confidence 44444556678899999999 8899888765 5668899999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+....
T Consensus 130 ~~~~~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 202 (325)
T cd05602 130 DSQGHIVLTDFGLCKENIEHNG-------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA 202 (325)
T ss_pred CCCCCEEEccCCCCcccccCCC-------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH
Confidence 4788999999999975432221 123567999999999999999999999999999999999999999875433
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 294 (449)
..+..+....... ....+..+.+++..||..+|.+|++..+
T Consensus 203 ---~~~~~i~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 203 ---EMYDNILNKPLQL-----KPNITNSARHLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred ---HHHHHHHhCCcCC-----CCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 3333333332222 2356789999999999999999998653
No 148
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.7e-38 Score=295.10 Aligned_cols=255 Identities=25% Similarity=0.359 Sum_probs=202.3
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++..++|++.+.||+|+||.||+|.+. +++.||+|.+..... ...+.+|+++++.++|++++...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~------------- 67 (261)
T cd05068 2 EIDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLY------------- 67 (261)
T ss_pred ccchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCcccee-------------
Confidence 356689999999999999999999975 456799998875432 34588899999999988755433
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
.+....+..|+|||++ +++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+|
T Consensus 68 --------------~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N 133 (261)
T cd05068 68 --------------AVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARN 133 (261)
T ss_pred --------------EEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcce
Confidence 3345667789999999 999999987543 568999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLP 238 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~p 238 (449)
|+++ +++.++|+|||+++........ .......+..|+|||++.+..++.++||||||+++|||++ |+.|
T Consensus 134 il~~---~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p 204 (261)
T cd05068 134 VLVG---ENNICKVADFGLARVIKEDIYE------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMP 204 (261)
T ss_pred EEEc---CCCCEEECCcceEEEccCCccc------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCC
Confidence 9994 7889999999999877533211 1112233467999999999899999999999999999999 9999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
|.+..... .+..+. .....+. ....+..+.+++..||..+|.+||++++|.+.|++
T Consensus 205 ~~~~~~~~---~~~~~~-~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 205 YPGMTNAE---VLQQVD-QGYRMPC---PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCCHHH---HHHHHH-cCCCCCC---CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 98755432 222222 2222221 13457899999999999999999999999998875
No 149
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.2e-38 Score=297.63 Aligned_cols=254 Identities=23% Similarity=0.374 Sum_probs=201.6
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
|-.++|+++++||+|+||.||+|.+. ++..||+|.+.... ..+.+.+|+.+++.++|++++..+.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~------------- 68 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA------------- 68 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEE-------------
Confidence 44678999999999999999999974 45679999876533 2446788999999999887655433
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.....+..+++||++ +++|.+++... ...+++..++.++.|++.||+|||+.+++||||||+||
T Consensus 69 --------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~ni 134 (261)
T cd05072 69 --------------VVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANV 134 (261)
T ss_pred --------------EEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhE
Confidence 334567789999999 88999988753 45689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf 239 (449)
+++ +++.++|+|||++......... ......++..|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 135 li~---~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~ 205 (261)
T cd05072 135 LVS---ESLMCKIADFGLARVIEDNEYT------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPY 205 (261)
T ss_pred Eec---CCCcEEECCCccceecCCCcee------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCC
Confidence 994 7889999999999876443211 1123345678999999998889999999999999999998 99999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
.+..... ....+.. ....+ .....+.++.+++.+||..+|++||+++++.+.|++
T Consensus 206 ~~~~~~~---~~~~~~~-~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 206 PGMSNSD---VMSALQR-GYRMP---RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCHHH---HHHHHHc-CCCCC---CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 8754432 2222221 22222 123467899999999999999999999999988874
No 150
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.5e-38 Score=309.70 Aligned_cols=235 Identities=23% Similarity=0.329 Sum_probs=185.0
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHH-HHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAK-VYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||+||+|++..+++.||||++.... ....+..|.. +++.++|++++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv--------------------- 59 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLV--------------------- 59 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCC---------------------
Confidence 47999999999999999999999999976431 1122344443 34556666544
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
.+.......+..|+||||+ +++|..++.. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 60 ------~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll--- 129 (323)
T cd05575 60 ------GLHYSFQTADKLYFVLDYVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL--- 129 (323)
T ss_pred ------CeeEEEEeCCEEEEEEcCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---
Confidence 4444456678899999999 8899888765 5679999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+....
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~ 202 (323)
T cd05575 130 DSQGHVVLTDFGLCKEGIEHSK-------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA 202 (323)
T ss_pred CCCCcEEEeccCCCcccccCCC-------ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH
Confidence 4788999999999875332211 123567899999999999999999999999999999999999999875432
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
+.+..+....... ....+.++.+++..||..+|.+||+..
T Consensus 203 ---~~~~~i~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 203 ---EMYDNILNKPLRL-----KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ---HHHHHHHcCCCCC-----CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 3333443333222 234588999999999999999999864
No 151
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.4e-38 Score=303.13 Aligned_cols=261 Identities=20% Similarity=0.310 Sum_probs=196.4
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCC--------------ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCccee
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTN--------------EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRL 67 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~--------------~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~ 67 (449)
-.++|++.++||+|+||.||+|++..++ ..||+|++..... ...+.+|+++++.++|++++..
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 4579999999999999999999875432 3599998875422 2357889999999998865544
Q ss_pred eEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-----------CCCCHHHHHHHH
Q 013125 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-----------RKFSLKTVLMLA 135 (449)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-----------~~~~~~~~~~i~ 135 (449)
..++...+..++||||+ +++|.+++.... ..+++..++.++
T Consensus 83 ---------------------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 135 (295)
T cd05097 83 ---------------------------LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMA 135 (295)
T ss_pred ---------------------------EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHH
Confidence 33445667889999999 889999885421 136888999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC
Q 013125 136 DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE 215 (449)
Q Consensus 136 ~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 215 (449)
.|++.||.|||++|++||||||+||+++ +++.+||+|||++........ +.......++..|+|||++.+..
T Consensus 136 ~~i~~al~~lH~~~i~H~dlkp~Nill~---~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~ 207 (295)
T cd05097 136 VQIASGMKYLASLNFVHRDLATRNCLVG---NHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGK 207 (295)
T ss_pred HHHHHHHHHHHhcCeeccccChhhEEEc---CCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCC
Confidence 9999999999999999999999999994 677899999999976543221 11123345577899999999888
Q ss_pred CCccchHHHHHHHHHHHHh--CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 216 QSRRDDLESLGYVLLYFLR--GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 216 ~s~~~DvwSlG~il~el~~--G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
++.++|||||||++|+|++ |..||...............................|+.+.+++..||..+|++||+++
T Consensus 208 ~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~ 287 (295)
T cd05097 208 FTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFN 287 (295)
T ss_pred cCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 9999999999999999988 67888765443222221111111111000111234578999999999999999999999
Q ss_pred HHHHHHH
Q 013125 294 FLKRLFH 300 (449)
Q Consensus 294 ~l~~~l~ 300 (449)
+|.+.|+
T Consensus 288 ~i~~~l~ 294 (295)
T cd05097 288 KIHHFLR 294 (295)
T ss_pred HHHHHHh
Confidence 9988765
No 152
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.6e-39 Score=313.33 Aligned_cols=237 Identities=24% Similarity=0.362 Sum_probs=190.8
Q ss_pred eeeecccCceeEEEEEEc---CCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 12 GRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~---~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
++.||+|+||.||++++. .+++.||+|++.... ....+.+|+++++.++|++++..
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~----------------- 63 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKL----------------- 63 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccE-----------------
Confidence 368999999999999873 578899999987432 22346779999999988875554
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
..+.......|+||||+ +++|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 64 ----------~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~- 131 (318)
T cd05582 64 ----------HYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL- 131 (318)
T ss_pred ----------EEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE-
Confidence 33345667899999999 8899888764 4568999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCCh
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~ 243 (449)
+.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 132 --~~~~~~kL~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~ 202 (318)
T cd05582 132 --DEEGHIKLTDFGLSKESIDHEK-------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD 202 (318)
T ss_pred --CCCCcEEEeeccCCcccCCCCC-------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC
Confidence 4788999999999876543321 1235678999999999999889999999999999999999999998754
Q ss_pred hhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHH
Q 013125 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294 (449)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 294 (449)
.. ..+..+.......| ..+++++.+++..||..||.+||++.+
T Consensus 203 ~~---~~~~~i~~~~~~~p-----~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 203 RK---ETMTMILKAKLGMP-----QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HH---HHHHHHHcCCCCCC-----CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 32 33334444333333 345789999999999999999999765
No 153
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=6.8e-38 Score=295.38 Aligned_cols=253 Identities=22% Similarity=0.380 Sum_probs=199.3
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+..++|++.++||+|+||.||+|.+..+ ..||+|++..... ...+.+|+++++.++|++++..+..
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~------------ 69 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAV------------ 69 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEE------------
Confidence 4568899999999999999999988654 4599998765433 3457889999999999886554322
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
. ..+..++||||+ +++|.+++... ...+++..+..++.|++.||+|||+.|++||||||+||
T Consensus 70 ---------------~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Ni 133 (260)
T cd05069 70 ---------------V-SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANI 133 (260)
T ss_pred ---------------E-cCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceE
Confidence 1 235578999999 77999988753 34589999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf 239 (449)
++ ++++.++|+|||++......... ......++..|++||.+.+..++.++|||||||++|||++ |..||
T Consensus 134 ll---~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 204 (260)
T cd05069 134 LV---GDNLVCKIADFGLARLIEDNEYT------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPY 204 (260)
T ss_pred EE---cCCCeEEECCCccceEccCCccc------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCC
Confidence 99 47889999999999765432211 1123446678999999998889999999999999999999 99999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
.+..... ....+.. ....+ .....+..+.+++..||..+|.+||++++|.+.|++
T Consensus 205 ~~~~~~~---~~~~~~~-~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 205 PGMVNRE---VLEQVER-GYRMP---CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCHHH---HHHHHHc-CCCCC---CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 8755432 2222222 22222 124568899999999999999999999999888764
No 154
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4e-38 Score=299.74 Aligned_cols=255 Identities=21% Similarity=0.311 Sum_probs=197.6
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcC-----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHV 75 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 75 (449)
+..++|++.++||+|+||.||+|.+.. ++..||+|++..... ...+.+|+.+++.++|++++..+
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~------- 75 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL------- 75 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEE-------
Confidence 567899999999999999999998742 356799998764322 23477899999999888755543
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHH
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------RKFSLKTVLMLADQMIARIEYV 145 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------~~~~~~~~~~i~~qil~~L~~L 145 (449)
.+...+...++||||+ +++|.+++.... ..+++..++.++.|++.||+||
T Consensus 76 --------------------~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 135 (277)
T cd05062 76 --------------------GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYL 135 (277)
T ss_pred --------------------EEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 3335667889999999 889999886532 2357788999999999999999
Q ss_pred HhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHH
Q 013125 146 HSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESL 225 (449)
Q Consensus 146 H~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSl 225 (449)
|+.|++||||||+||+++ +++.++|+|||+++........ .......++..|+|||++.+..++.++|||||
T Consensus 136 H~~~~vH~dlkp~Nil~~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 207 (277)
T cd05062 136 NANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 207 (277)
T ss_pred HHCCcccCCcchheEEEc---CCCCEEECCCCCccccCCccee-----ecCCCCccCHhhcChhHhhcCCcCchhHHHHH
Confidence 999999999999999994 7889999999998765432221 11123345788999999999889999999999
Q ss_pred HHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 226 GYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 226 G~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
||++|||++ |..||.+.... .....+...... + .....+..+.+++.+||..+|++||++.++.+.|+
T Consensus 208 G~~l~el~~~~~~p~~~~~~~---~~~~~~~~~~~~-~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 208 GVVLWEIATLAEQPYQGMSNE---QVLRFVMEGGLL-D---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHHHcCCCCCCCCCCHH---HHHHHHHcCCcC-C---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 999999999 78999875443 222222222211 1 12345789999999999999999999999887664
No 155
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.5e-38 Score=330.19 Aligned_cols=263 Identities=27% Similarity=0.362 Sum_probs=202.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.++||+|+||.||+|.+..+++.||||++..... ..++.+|+++++.++|++++..+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~------------- 68 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY------------- 68 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEE-------------
Confidence 689999999999999999999999999999998865322 23578899999999988755543
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC----------RRKFSLKTVLMLADQMIARIEYVHSRGF 150 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~----------~~~~~~~~~~~i~~qil~~L~~LH~~gi 150 (449)
.++...+..|+||||+ |++|.+++... ...++...++.++.||+.||+|||++||
T Consensus 69 --------------~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GI 134 (932)
T PRK13184 69 --------------SICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGV 134 (932)
T ss_pred --------------EEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3345667889999999 89999988642 1235677889999999999999999999
Q ss_pred cccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCc-----------cccccCCCCCCCCccccccccccCCCCCcc
Q 013125 151 LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR-----------HIPYRENKNLTGTARYASCNTHLGIEQSRR 219 (449)
Q Consensus 151 iHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~-----------~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~ 219 (449)
+||||||+|||+ +..+.++|+|||+++......... ..........+||+.|+|||++.+..++.+
T Consensus 135 IHRDLKPeNILL---d~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~k 211 (932)
T PRK13184 135 LHRDLKPDNILL---GLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASES 211 (932)
T ss_pred cccCCchheEEE---cCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcH
Confidence 999999999999 477899999999998762211000 000111234679999999999999999999
Q ss_pred chHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHH-hhccChHHHHHHHHHHhCCCCCCCC-CHHHHHH
Q 013125 220 DDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV-LCKSHPAEFASYFHYCQSLTFDQRP-DYGFLKR 297 (449)
Q Consensus 220 ~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~~Rp-~~~~l~~ 297 (449)
+|||||||++|||++|..||........ .. ......+... .....|+.+.+++.+||..||.+|+ +++++.+
T Consensus 212 SDIWSLGVILyELLTG~~PF~~~~~~ki--~~----~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 212 TDIYALGVILYQMLTLSFPYRRKKGRKI--SY----RDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hHHHHHHHHHHHHHHCCCCCCCcchhhh--hh----hhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999999999987433211 11 1111112111 1235688999999999999999996 4677777
Q ss_pred HHHHHHHh
Q 013125 298 LFHDLFSR 305 (449)
Q Consensus 298 ~l~~~~~~ 305 (449)
.|+..+..
T Consensus 286 ~Le~~lq~ 293 (932)
T PRK13184 286 DLEPHLQG 293 (932)
T ss_pred HHHHHHhc
Confidence 77777653
No 156
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-38 Score=310.71 Aligned_cols=192 Identities=23% Similarity=0.321 Sum_probs=162.6
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
..+|++++.||+|+||.||+|++..+++.||+|+... .....|+.+++.++|+++++++.
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~----~~~~~E~~~l~~l~h~~iv~~~~---------------- 124 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK----GTTLIEAMLLQNVNHPSVIRMKD---------------- 124 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc----cccHHHHHHHHhCCCCCCcChhh----------------
Confidence 4579999999999999999999999999999998543 23467999999999987665433
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
+.......|+|+|++.++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 125 -----------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill--- 190 (357)
T PHA03209 125 -----------TLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI--- 190 (357)
T ss_pred -----------eEEeCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---
Confidence 334567789999999999999887767789999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+..+.+||+|||+++....... .....||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus 191 ~~~~~~kl~DfG~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 191 NDVDQVCIGDLGAAQFPVVAPA--------FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred CCCCCEEEecCccccccccCcc--------cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 4788999999999974332211 13567899999999999999999999999999999999854444
No 157
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.1e-38 Score=299.43 Aligned_cols=252 Identities=19% Similarity=0.291 Sum_probs=197.1
Q ss_pred CceEEeeeecccCceeEEEEEEc----CCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHV----DTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
..|++.++||+|+||.||+|.+. .+++.||+|.+...... ..+.+|+++++.++|++++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~---------- 74 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLG---------- 74 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEE----------
Confidence 57899999999999999999863 35578999988643322 34778999999999887655433
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHH
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC----------------RRKFSLKTVLMLADQMIARI 142 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~----------------~~~~~~~~~~~i~~qil~~L 142 (449)
+...+...|+||||+ +++|.+++... ...++..+++.++.||+.||
T Consensus 75 -----------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 137 (283)
T cd05090 75 -----------------VVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGM 137 (283)
T ss_pred -----------------EEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHH
Confidence 334567789999999 78999887532 12478889999999999999
Q ss_pred HHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchH
Q 013125 143 EYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDL 222 (449)
Q Consensus 143 ~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dv 222 (449)
+|||++|++||||||+|||++ +++.+||+|||+++......... ......++..|+|||++.+..++.++||
T Consensus 138 ~~lH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 209 (283)
T cd05090 138 EYLSSHFFVHKDLAARNILIG---EQLHVKISDLGLSREIYSADYYR-----VQPKSLLPIRWMPPEAIMYGKFSSDSDI 209 (283)
T ss_pred HHHHhcCeehhccccceEEEc---CCCcEEeccccccccccCCccee-----cccCCCccceecChHHhccCCCCchhhh
Confidence 999999999999999999994 77889999999998664332211 1234456778999999998889999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 223 ESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 223 wSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
|||||++|||++ |..||.+..... ....+ ...... .....+++.+.+++.+||..+|.+||++.+|.+.|+
T Consensus 210 ~slG~il~el~~~g~~p~~~~~~~~---~~~~~-~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 210 WSFGVVLWEIFSFGLQPYYGFSNQE---VIEMV-RKRQLL---PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH-HcCCcC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 999999999998 999998754322 12222 222211 133456889999999999999999999999988775
No 158
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=7e-38 Score=294.78 Aligned_cols=247 Identities=22% Similarity=0.353 Sum_probs=192.5
Q ss_pred eeecccCceeEEEEEE--cCCCceEEEEEecCCCCc----hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASH--VDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~--~~~~~~vAvKv~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
++||+|+||.||+|.+ ..++..||+|+++..... ..+..|+.+++.+.|++++..++.+
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------------- 65 (257)
T cd05116 1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGIC--------------- 65 (257)
T ss_pred CcCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEE---------------
Confidence 3689999999999965 456789999998754332 3577889999999998866654321
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
..+..++|||++ +++|.+++.. ...++...+..++.||+.||+|||++||+||||||+||++.
T Consensus 66 -------------~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~-- 129 (257)
T cd05116 66 -------------EAESWMLVMELAELGPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV-- 129 (257)
T ss_pred -------------cCCCcEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc--
Confidence 234678999999 7889888865 45799999999999999999999999999999999999994
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKA 244 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~ 244 (449)
.++.++|+|||++......... +.......++..|+|||.+.+..++.++|||||||++|||++ |..||.+...
T Consensus 130 -~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 204 (257)
T cd05116 130 -TQHYAKISDFGLSKALGADENY----YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG 204 (257)
T ss_pred -CCCeEEECCCccccccCCCCCe----eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 6788999999999765433221 011122334678999999988889999999999999999998 9999987554
Q ss_pred hcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
.. ....+.. ....+ ....+++++.+++..||..||++||++.+|...|+++
T Consensus 205 ~~---~~~~i~~-~~~~~---~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 205 NE---VTQMIES-GERME---CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HH---HHHHHHC-CCCCC---CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 32 2222222 11112 2235688999999999999999999999998888754
No 159
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-37 Score=294.89 Aligned_cols=255 Identities=17% Similarity=0.283 Sum_probs=201.8
Q ss_pred CCceEEeeeecccCceeEEEEEEcCC---CceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~---~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
.++|++.+.||+|+||.||+|.+..+ ...||+|++..... ...+.+|+.+++.++|++++....
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~---------- 72 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEG---------- 72 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeE----------
Confidence 46899999999999999999998643 45799998875432 234778999999998887555433
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
+....+..++||||+ +++|.+++......+++..++.++.|++.||.|||+.||+||||||+
T Consensus 73 -----------------~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~ 135 (266)
T cd05033 73 -----------------VVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAAR 135 (266)
T ss_pred -----------------EEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence 345567789999999 88999998766667999999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSL 237 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~ 237 (449)
||+++ +++.++|+|||+++......... ......++..|++||.+.+..++.++|||||||++|||++ |..
T Consensus 136 nili~---~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~ 207 (266)
T cd05033 136 NILVN---SNLVCKVSDFGLSRRLEDSEATY-----TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGER 207 (266)
T ss_pred eEEEc---CCCCEEECccchhhcccccccce-----eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCC
Confidence 99994 78899999999998775222110 0112345678999999998899999999999999999998 999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
||...... .....+.. ....+.+ ...+..+.+++..||+.+|++||++.+|.+.|.++
T Consensus 208 p~~~~~~~---~~~~~~~~-~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 208 PYWDMSNQ---DVIKAVED-GYRLPPP---MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCHH---HHHHHHHc-CCCCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99765433 22222222 2122221 34578999999999999999999999999988765
No 160
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.9e-38 Score=297.04 Aligned_cols=258 Identities=20% Similarity=0.354 Sum_probs=197.7
Q ss_pred eEEeeeecccCceeEEEEEEcCCCc--eEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNE--IVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~--~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
|.++++||+|+||.||+|++..++. .||+|.++... ....+..|+++++.++|++++..++.+....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 73 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTV------- 73 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCC-------
Confidence 4578999999999999999876665 69999876532 2334778999999999998877765442110
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-----RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-----~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
........+++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+|||||
T Consensus 74 --------------~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 139 (272)
T cd05075 74 --------------ESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLA 139 (272)
T ss_pred --------------cccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 001223568999999 78998877532 2348899999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-C
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-G 235 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G 235 (449)
|+|||+ ++++.++|+|||+++....... +.......++..|++||.+.+..++.++|||||||++|||++ |
T Consensus 140 p~Nil~---~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g 211 (272)
T cd05075 140 ARNCML---NENMNVCVADFGLSKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRG 211 (272)
T ss_pred hhheEE---cCCCCEEECCCCcccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCC
Confidence 999999 4788999999999987643321 111223456778999999999999999999999999999999 8
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
..||.+.... .....+..... .+ .....+..+.+++..||..+|++||++.+|.+.|+++
T Consensus 212 ~~p~~~~~~~---~~~~~~~~~~~-~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 212 QTPYPGVENS---EIYDYLRQGNR-LK---QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCCCCHH---HHHHHHHcCCC-CC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 9999875432 22222222111 11 1234578899999999999999999999999988764
No 161
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=8.6e-38 Score=293.90 Aligned_cols=249 Identities=19% Similarity=0.273 Sum_probs=196.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
++|++.+.||+|+||.||+|.+.. +..+|+|.+.... ....+.+|+++++.++|++++..+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~----------------- 65 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLY----------------- 65 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEE-----------------
Confidence 579999999999999999998754 5579999876543 244688899999999988755443
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~ 164 (449)
.++......++||||+ +++|.+++......+++..++.++.|++.||+|||++||+||||||+||++.
T Consensus 66 ----------~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~- 134 (256)
T cd05114 66 ----------GVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS- 134 (256)
T ss_pred ----------EEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc-
Confidence 3445667889999999 8999998876555689999999999999999999999999999999999994
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCCh
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLK 243 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~ 243 (449)
+++.++|+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 135 --~~~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~ 206 (256)
T cd05114 135 --STGVVKVSDFGMTRYVLDDEYT------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS 206 (256)
T ss_pred --CCCeEEECCCCCccccCCCcee------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 7889999999998765432211 1123345678999999998889999999999999999999 999997754
Q ss_pred hhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
.. +.+..+.... ....+ ...+..+.+++..||..+|++||++.++.+.|
T Consensus 207 ~~---~~~~~i~~~~-~~~~~---~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 207 NY---EVVEMISRGF-RLYRP---KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HH---HHHHHHHCCC-CCCCC---CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 33 2233332221 11111 23467899999999999999999999987754
No 162
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.7e-38 Score=299.44 Aligned_cols=240 Identities=20% Similarity=0.256 Sum_probs=187.9
Q ss_pred ecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 15 LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
||+|+||+||+|.+..+++.||+|.+.... .......|+++++.++|++++...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~--------------------- 59 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLA--------------------- 59 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEE---------------------
Confidence 799999999999999999999999875321 122356799999999888755433
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 167 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~ 167 (449)
.....+.+.|+||||+ |++|.+++... ...+++..++.++.||+.||+|||+.||+||||||+||++. +
T Consensus 60 ------~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~ 130 (277)
T cd05607 60 ------YAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---D 130 (277)
T ss_pred ------EEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---C
Confidence 3335667899999999 88998877643 34589999999999999999999999999999999999994 7
Q ss_pred CCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhc-
Q 013125 168 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT- 246 (449)
Q Consensus 168 ~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~- 246 (449)
++.++|+|||++........ .....|+..|+|||++.+..++.++|||||||++|||++|..||.+.....
T Consensus 131 ~~~~~l~Dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~ 202 (277)
T cd05607 131 QGNCRLSDLGLAVELKDGKT--------ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA 202 (277)
T ss_pred CCCEEEeeceeeeecCCCce--------eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh
Confidence 88999999999987654321 123468899999999999889999999999999999999999997643321
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
.......+....... ....++.++.+++..||+.||.+||++.++.
T Consensus 203 ~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~ 248 (277)
T cd05607 203 KEELKRRTLEDEVKF----EHQNFTEESKDICRLFLAKKPEDRLGSREKN 248 (277)
T ss_pred HHHHHHHhhcccccc----ccccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence 112222222211111 1235688999999999999999999986653
No 163
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.2e-38 Score=295.37 Aligned_cols=248 Identities=21% Similarity=0.304 Sum_probs=198.2
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
..+|++.+.||+|+||.||+|.. .+..||+|..........+.+|+.+++.++|++++...+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~--------------- 67 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGV--------------- 67 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEE---------------
Confidence 46899999999999999999976 4778999998766555678899999999998876654432
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRR-KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~-~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
+.......++|+||+ +++|.+++..... .+++..++.++.|++.||+|||++|++||||||+||+++
T Consensus 68 -----------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~ 136 (256)
T cd05082 68 -----------IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS 136 (256)
T ss_pred -----------EEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc
Confidence 123445689999999 7899998875433 488999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~ 242 (449)
+++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 137 ---~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~ 203 (256)
T cd05082 137 ---EDNVAKVSDFGLTKEASSTQ----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred ---CCCcEEecCCccceeccccC----------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 78899999999987654322 12344568999999998889999999999999999997 99999764
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
.... ....+ ...... .....+|+.+.+++.+||..+|++||++.++.+.|++
T Consensus 204 ~~~~---~~~~~-~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 204 PLKD---VVPRV-EKGYKM---DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CHHH---HHHHH-hcCCCC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 3321 22222 111111 1224568899999999999999999999999887764
No 164
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.5e-38 Score=301.35 Aligned_cols=259 Identities=20% Similarity=0.318 Sum_probs=195.9
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcC----------------CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCc
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVD----------------TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSK 64 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~----------------~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~ 64 (449)
+..++|++.++||+|+||.||+|.+.. +...||+|++..... ...+.+|+++++.++|+++
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 2 FPRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred CChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc
Confidence 346789999999999999999986532 344699999875432 2357889999999998875
Q ss_pred ceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc----------CCCCHHHHHH
Q 013125 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR----------RKFSLKTVLM 133 (449)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~----------~~~~~~~~~~ 133 (449)
+.. ..++...+..++||||+ +++|.+++.... ..+++.++..
T Consensus 82 ~~~---------------------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 134 (296)
T cd05095 82 IRL---------------------------LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIF 134 (296)
T ss_pred ceE---------------------------EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHH
Confidence 544 33445567789999999 889998886532 2367889999
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC
Q 013125 134 LADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG 213 (449)
Q Consensus 134 i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 213 (449)
++.||+.||+|||++|++||||||+|||++ +++.++|+|||+++.+...... .......++..|++||++.+
T Consensus 135 ~~~~i~~al~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~ 206 (296)
T cd05095 135 MATQIASGMKYLSSLNFVHRDLATRNCLVG---KNYTIKIADFGMSRNLYSGDYY-----RIQGRAVLPIRWMSWESILL 206 (296)
T ss_pred HHHHHHHHHHHHHHCCeecccCChheEEEc---CCCCEEeccCcccccccCCcce-----eccCcCcCccccCCHHHHhc
Confidence 999999999999999999999999999994 6789999999999765433211 11123344678999999888
Q ss_pred CCCCccchHHHHHHHHHHHHh--CCCCCCCChhhcHHHHHHHHHHh---hcCCCHHHhhccChHHHHHHHHHHhCCCCCC
Q 013125 214 IEQSRRDDLESLGYVLLYFLR--GSLPWQGLKAATKKQKYDKICEK---KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQ 288 (449)
Q Consensus 214 ~~~s~~~DvwSlG~il~el~~--G~~pf~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~ 288 (449)
..++.++|||||||++|||++ |..||.................. ....+. ...++..+.+++..||..||.+
T Consensus 207 ~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~ 283 (296)
T cd05095 207 GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPK---PALCPDSLYKLMLSCWRRNAKE 283 (296)
T ss_pred CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCC---CCCCCHHHHHHHHHHcCCCccc
Confidence 889999999999999999998 78899765443222111111100 111111 1235789999999999999999
Q ss_pred CCCHHHHHHHHH
Q 013125 289 RPDYGFLKRLFH 300 (449)
Q Consensus 289 Rp~~~~l~~~l~ 300 (449)
||++.+|.+.|+
T Consensus 284 Rp~~~~i~~~l~ 295 (296)
T cd05095 284 RPSFQEIHATLL 295 (296)
T ss_pred CCCHHHHHHHHh
Confidence 999999988775
No 165
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.9e-39 Score=292.85 Aligned_cols=300 Identities=21% Similarity=0.330 Sum_probs=217.6
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCc----eEEEEEecCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~----~vAvKv~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
..|+++.+||+|.||.||+|...+++. .+|||.++.. .-.....+|+.+++.|+|+|++.+..++.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl------ 97 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFL------ 97 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHh------
Confidence 469999999999999999996654433 6899988765 22446899999999999999877654432
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC----RRKFSLKTVLMLADQMIARIEYVHSRGFLHRD 154 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~----~~~~~~~~~~~i~~qil~~L~~LH~~giiHrD 154 (449)
..+..+++++||...+|..+++.. .+.++...++.|++||+.|+.|||+.-|+|||
T Consensus 98 --------------------~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRD 157 (438)
T KOG0666|consen 98 --------------------SHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRD 157 (438)
T ss_pred --------------------ccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeecc
Confidence 336788999999999999999754 34589999999999999999999999999999
Q ss_pred CCCCcEEeec-CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHH
Q 013125 155 IKPDNFLMGL-GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYF 232 (449)
Q Consensus 155 Lkp~Nill~~-~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el 232 (449)
|||.|||+.. +...|.|||+|||+|+.+.++.. |......++.|.+|+|||+++|.. |+.++|||+.|||+.||
T Consensus 158 LKPaNIlvmgdgperG~VKIaDlGlaR~~~~plk----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaEl 233 (438)
T KOG0666|consen 158 LKPANILVMGDGPERGRVKIADLGLARLFNNPLK----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAEL 233 (438)
T ss_pred CCcceEEEeccCCccCeeEeecccHHHHhhcccc----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHH
Confidence 9999999953 34569999999999999887643 333446778899999999999876 99999999999999999
Q ss_pred HhCCCCCCCChhhc------HHHHHHHHHHhhcCCCHHHhhc---cChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Q 013125 233 LRGSLPWQGLKAAT------KKQKYDKICEKKVSTPIEVLCK---SHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303 (449)
Q Consensus 233 ~~G~~pf~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~ 303 (449)
++-++.|.+..... ....+.+|.+.. ..|...-|. ++| +...++...-.. .+..+ -|...+
T Consensus 234 Ltl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vL-G~Pt~~~Wp~lkk~P-e~q~~ls~f~~~------~~~n~--sL~~~~ 303 (438)
T KOG0666|consen 234 LTLEPLFKGREEKIKTKNPFQHDQLDRIFEVL-GTPTDKDWPDLKKMP-EYQTLLSDFRRH------YYDNV--SLHKYY 303 (438)
T ss_pred HccCccccchhhhcccCCCchHHHHHHHHHHc-CCCccccchhhhhCc-chHHHHHHhHHh------hcCcc--hHHHHH
Confidence 99999998754321 122334443322 223222221 112 222222211110 00000 123333
Q ss_pred HhcCCCCCccccc--ccccccccccccccccCCCCccccCCCCcc
Q 013125 304 SREGYDFDFVFDW--TILKYQQTQKTKSQDLLPASRVTNSRVMPM 346 (449)
Q Consensus 304 ~~~~~~~~~~~dw--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (449)
...+......+|. ++|.|+|.+|.++.+++.|++|++....+.
T Consensus 304 ~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lpp~ 348 (438)
T KOG0666|consen 304 HKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLPPL 348 (438)
T ss_pred HHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCCCC
Confidence 3333333333332 889999999999999999999998865543
No 166
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8.8e-38 Score=311.61 Aligned_cols=259 Identities=21% Similarity=0.300 Sum_probs=200.1
Q ss_pred ccCCceEEeeeecccCceeEEEEEEc-----CCCceEEEEEecCCCCc---hhHHHHHHHHHHHc-CCCcceeeEeecch
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTKH---PQLLYEAKVYKILQ-GGSKIRLVVFHVDH 74 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~-~~~~~~~~~~~~~~ 74 (449)
+-.++|.++++||+|+||.||+|++. .+++.||+|+++..... ..+.+|++++..+. |++++.+++.
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~---- 109 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGA---- 109 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEE----
Confidence 34567899999999999999999863 34568999998754322 25778999999997 8776655443
Q ss_pred hhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc------------------------------
Q 013125 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR------------------------------ 123 (449)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~------------------------------ 123 (449)
.......++||||+ +++|.+++....
T Consensus 110 -----------------------~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (401)
T cd05107 110 -----------------------CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKS 166 (401)
T ss_pred -----------------------EccCCCcEEEEeccCCCcHHHHHHhccccchhhhccccccccccccccccccccccc
Confidence 34556789999999 899999886431
Q ss_pred -------------------------------------------------------------------CCCCHHHHHHHHH
Q 013125 124 -------------------------------------------------------------------RKFSLKTVLMLAD 136 (449)
Q Consensus 124 -------------------------------------------------------------------~~~~~~~~~~i~~ 136 (449)
..+++..++.++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 246 (401)
T cd05107 167 HVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSY 246 (401)
T ss_pred chhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHH
Confidence 1367778899999
Q ss_pred HHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCC
Q 013125 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ 216 (449)
Q Consensus 137 qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 216 (449)
||+.||+|||+.+|+||||||+|||+. +.+.++|+|||+++........ .......++..|+|||++.+..+
T Consensus 247 qi~~aL~~LH~~~ivHrdlkp~NiLl~---~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~ 318 (401)
T cd05107 247 QVANGMEFLASKNCVHRDLAARNVLIC---EGKLVKICDFGLARDIMRDSNY-----ISKGSTFLPLKWMAPESIFNNLY 318 (401)
T ss_pred HHHHHHHHHhcCCcCcccCCcceEEEe---CCCEEEEEecCcceeccccccc-----ccCCCcCCCCceeChHHhcCCCC
Confidence 999999999999999999999999994 6789999999999865432211 11223456789999999999889
Q ss_pred CccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 217 SRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 217 s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
+.++|||||||++|||++ |..||....... ............+. ....+.++.+++..||..+|.+||++.+|
T Consensus 319 ~~~~DvwslGvil~e~l~~g~~P~~~~~~~~---~~~~~~~~~~~~~~---p~~~~~~l~~li~~cl~~~P~~RPs~~el 392 (401)
T cd05107 319 TTLSDVWSFGILLWEIFTLGGTPYPELPMNE---QFYNAIKRGYRMAK---PAHASDEIYEIMQKCWEEKFEIRPDFSQL 392 (401)
T ss_pred CcHhHHHHHHHHHHHHHHcCCCCCCCCCchH---HHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 999999999999999998 899997654322 22222222221111 13357899999999999999999999999
Q ss_pred HHHHHHHH
Q 013125 296 KRLFHDLF 303 (449)
Q Consensus 296 ~~~l~~~~ 303 (449)
.+.|+.++
T Consensus 393 l~~L~~~~ 400 (401)
T cd05107 393 VHLVGDLL 400 (401)
T ss_pred HHHHHHHh
Confidence 99998765
No 167
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.6e-38 Score=301.79 Aligned_cols=261 Identities=20% Similarity=0.310 Sum_probs=200.7
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcC-------CCceEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeec
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVD-------TNEIVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHV 72 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~-------~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~ 72 (449)
+..++|.++++||+|+||.||+|++.. +...||+|++..... ...+.+|+++++.+ +|++++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~------ 88 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN------ 88 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEee------
Confidence 345799999999999999999998743 234699999875422 23477799999888 5665444
Q ss_pred chhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------------CCCCHHHHHHHHH
Q 013125 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLAD 136 (449)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------------~~~~~~~~~~i~~ 136 (449)
+..++...+..|+||||+ +++|.+++.... ..+++.+++.++.
T Consensus 89 ---------------------~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 147 (307)
T cd05098 89 ---------------------LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAY 147 (307)
T ss_pred ---------------------EEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHH
Confidence 333445667889999999 789999987532 2478899999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCC
Q 013125 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ 216 (449)
Q Consensus 137 qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 216 (449)
||+.||+|||++|++||||||+||+++ .++.++|+|||+++......... ......++..|+|||++.+..+
T Consensus 148 qi~~aL~~lH~~gi~H~dlkp~Nill~---~~~~~kL~dfg~a~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~ 219 (307)
T cd05098 148 QVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIY 219 (307)
T ss_pred HHHHHHHHHHHCCcccccccHHheEEc---CCCcEEECCCcccccccccchhh-----ccccCCCccceeChHHhccCCC
Confidence 999999999999999999999999994 77899999999987654322111 0112234568999999999889
Q ss_pred CccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 217 SRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 217 s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
+.++|||||||++|||++ |..||.+.... +... .+...... ......+.++.+++..||..+|.+||++.++
T Consensus 220 ~~~~DvwslG~~l~el~~~g~~p~~~~~~~---~~~~-~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~ev 292 (307)
T cd05098 220 THQSDVWSFGVLLWEIFTLGGSPYPGVPVE---ELFK-LLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 292 (307)
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCCCcCCHH---HHHH-HHHcCCCC---CCCCcCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 999999999999999998 88999764332 2222 22222111 1223457899999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 013125 296 KRLFHDLFSRE 306 (449)
Q Consensus 296 ~~~l~~~~~~~ 306 (449)
.+.|++++...
T Consensus 293 l~~l~~~~~~~ 303 (307)
T cd05098 293 VEDLDRILALT 303 (307)
T ss_pred HHHHHHHHHHh
Confidence 99999887654
No 168
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.9e-38 Score=296.32 Aligned_cols=250 Identities=27% Similarity=0.445 Sum_probs=196.7
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchh----HHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ----LLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~----~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
|++++.||+|+||+||+|.+..+++.||+|++........ ..+|+.+++.++|++++..
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~----------------- 63 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQI----------------- 63 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHE-----------------
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccc-----------------
Confidence 8999999999999999999999999999999887643322 2458899999988765443
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
..+.......++|||++ +++|.+++. ....++...++.++.||+.||++||++|++|+||||+||++
T Consensus 64 ----------~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~- 131 (260)
T PF00069_consen 64 ----------LDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL- 131 (260)
T ss_dssp ----------EEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE-
T ss_pred ----------ccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccc-
Confidence 33445578899999999 459999887 35678999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-CCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-GIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+.++.++|+|||.+........ ......++..|+|||++. +..++.++||||+|+++|+|++|..||...
T Consensus 132 --~~~~~~~l~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 132 --DENGEVKLIDFGSSVKLSENNE-------NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp --STTSEEEESSGTTTEESTSTTS-------EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred --cccccccccccccccccccccc-------ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4789999999999986522111 124567899999999998 888999999999999999999999999986
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
........+............. .....+.++.+++..||..||++||++.++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 203 NSDDQLEIIEKILKRPLPSSSQ-QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp SHHHHHHHHHHHHHTHHHHHTT-SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cchhhhhhhhhccccccccccc-ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 3333333333322211111100 00112478999999999999999999887753
No 169
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.2e-37 Score=295.33 Aligned_cols=258 Identities=20% Similarity=0.349 Sum_probs=198.9
Q ss_pred eEEeeeecccCceeEEEEEEcC---CCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVD---TNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~---~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
|++++.||+|+||.||+|.+.. ++..||+|++..... ...+.+|+++++.++|++++..++......
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEAS------ 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCC------
Confidence 6789999999999999998764 347899998875432 235788999999999998776655432110
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-----RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDI 155 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-----~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDL 155 (449)
........++++||+ +++|..++... ...+++..++.++.|++.||+|||++|++||||
T Consensus 75 ---------------~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dl 139 (273)
T cd05035 75 ---------------SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDL 139 (273)
T ss_pred ---------------ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence 001223579999999 88998887543 235899999999999999999999999999999
Q ss_pred CCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-
Q 013125 156 KPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR- 234 (449)
Q Consensus 156 kp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~- 234 (449)
||+||++ ++++.+||+|||+++........ .......++..|++||++.+..++.++|||||||++|||++
T Consensus 140 kp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~ 211 (273)
T cd05035 140 AARNCML---REDMTVCVADFGLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 211 (273)
T ss_pred chheEEE---CCCCeEEECCccceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhC
Confidence 9999999 47789999999999876544321 11223345678999999998889999999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
|..||.+.... +.+..+.... ... ....++.++.+++.+||..||.+||++.++.+.|+++
T Consensus 212 g~~p~~~~~~~---~~~~~~~~~~-~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 212 GQTPYPGVENH---EIYDYLRHGN-RLK---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCCCCCCHH---HHHHHHHcCC-CCC---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 99999875443 2232322221 111 2245688999999999999999999999999988765
No 170
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=9e-38 Score=306.72 Aligned_cols=261 Identities=21% Similarity=0.322 Sum_probs=198.6
Q ss_pred cCCceEEeeeecccCceeEEEEEEc-----CCCceEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeecchh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHV 75 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~ 75 (449)
-.++|++++.||+|+||.||+|.+. .+++.||||+++.... ...+.+|+.++..+ +|++++..+..
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~----- 79 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA----- 79 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcce-----
Confidence 4579999999999999999999853 4577899999875432 23477899999998 45665444322
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-------------------------------
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR------------------------------- 123 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~------------------------------- 123 (449)
+...+...++||||+ +++|.+++....
T Consensus 80 ---------------------~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (343)
T cd05103 80 ---------------------CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRL 138 (343)
T ss_pred ---------------------eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhc
Confidence 223445679999999 899998876421
Q ss_pred -----------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 124 -----------------------------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 124 -----------------------------------~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
..+++..+..++.||+.||+|||++||+||||||+|||+. .+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~ 215 (343)
T cd05103 139 DSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EN 215 (343)
T ss_pred cccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CC
Confidence 2367888899999999999999999999999999999994 77
Q ss_pred CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChhhcH
Q 013125 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATK 247 (449)
Q Consensus 169 ~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~ 247 (449)
+.+||+|||++......... .......++..|+|||++.+..++.++|||||||++|||++ |..||.+.....
T Consensus 216 ~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~- 289 (343)
T cd05103 216 NVVKICDFGLARDIYKDPDY-----VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 289 (343)
T ss_pred CcEEEEecccccccccCcch-----hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-
Confidence 89999999999765432211 11223345678999999999899999999999999999997 999998754321
Q ss_pred HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 248 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 248 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
.+..........+.+ ...++++.+++..||..+|.+||++.+|.+.|+.++..
T Consensus 290 --~~~~~~~~~~~~~~~---~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 290 --EFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred --HHHHHHhccCCCCCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111112211111111 23467899999999999999999999999999988753
No 171
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.4e-38 Score=308.49 Aligned_cols=235 Identities=23% Similarity=0.299 Sum_probs=184.2
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHH-HHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAK-VYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||+||+|++..+++.||+|++.... ....+..|.. +++.++|++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv--------------------- 59 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLV--------------------- 59 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCc---------------------
Confidence 46999999999999999999999999986431 1223444444 34556666544
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
.+.......+..|+||||+ +++|...+.. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 60 ------~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll--- 129 (325)
T cd05604 60 ------GLHYSFQTTEKLYFVLDFVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL--- 129 (325)
T ss_pred ------cEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---
Confidence 3444456678899999999 8888877764 5679999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
++++.+||+|||+++....... ......||..|+|||++.+..++.++|||||||++|||++|..||.+....
T Consensus 130 ~~~~~~kL~DfG~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~ 202 (325)
T cd05604 130 DSQGHVVLTDFGLCKEGIAQSD-------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA 202 (325)
T ss_pred CCCCCEEEeecCCcccCCCCCC-------CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH
Confidence 4788999999999875332211 123567999999999999999999999999999999999999999875432
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
+.+..+.......+ ...+..+.+++..|+..+|.+||++.
T Consensus 203 ---~~~~~~~~~~~~~~-----~~~~~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 203 ---EMYDNILHKPLVLR-----PGASLTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred ---HHHHHHHcCCccCC-----CCCCHHHHHHHHHHhccCHHhcCCCC
Confidence 33333333322221 34578899999999999999999864
No 172
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.8e-38 Score=294.53 Aligned_cols=254 Identities=24% Similarity=0.397 Sum_probs=200.3
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++..++|++.++||+|+||.||+|.+. .+..||+|.+..... ...+.+|+.+++.++|++++..+..
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~----------- 69 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAV----------- 69 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeE-----------
Confidence 356789999999999999999999875 456699998875433 3468899999999999886655432
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
. .....+++||++ +++|.+++... ...+++..++.++.|++.||.|||+.|++||||||+|
T Consensus 70 ----------------~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~N 132 (260)
T cd05070 70 ----------------V-SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSAN 132 (260)
T ss_pred ----------------E-CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccce
Confidence 1 234578999999 88999988753 3458999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLP 238 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~p 238 (449)
|+++ +++.++|+|||++......... ......++..|+|||++.+..++.++||||||+++|||++ |..|
T Consensus 133 ili~---~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p 203 (260)
T cd05070 133 ILVG---DGLVCKIADFGLARLIEDNEYT------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 203 (260)
T ss_pred EEEe---CCceEEeCCceeeeeccCcccc------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCC
Confidence 9995 6789999999999865433211 1123345678999999998889999999999999999999 9999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
|.+..... ....+. .....+. ....+..+.+++..||..+|.+||++.++.+.|++
T Consensus 204 ~~~~~~~~---~~~~~~-~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 204 YPGMNNRE---VLEQVE-RGYRMPC---PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCHHH---HHHHHH-cCCCCCC---CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 98754332 222222 1222221 24557899999999999999999999999887764
No 173
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.2e-37 Score=292.07 Aligned_cols=246 Identities=22% Similarity=0.337 Sum_probs=192.6
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
++||+|+||.||+|.+..+++.||+|....... ...+.+|+++++.++|++++..+.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-------------------- 60 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG-------------------- 60 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEE--------------------
Confidence 479999999999999998999999998764322 235788999999999887655443
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
++......++||||+ +++|.+++......+++..++.++.|++.||.|||++||+||||||+|||++ .+
T Consensus 61 -------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~ 130 (252)
T cd05084 61 -------VCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EK 130 (252)
T ss_pred -------EEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CC
Confidence 344567789999999 8899998876556789999999999999999999999999999999999994 77
Q ss_pred CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChhhcH
Q 013125 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATK 247 (449)
Q Consensus 169 ~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~ 247 (449)
+.+||+|||++.......... .......+..|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 131 ~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~ 205 (252)
T cd05084 131 NVLKISDFGMSREEEDGVYAS-----TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT 205 (252)
T ss_pred CcEEECccccCcccccccccc-----cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH
Confidence 889999999987543321100 0111223457999999998889999999999999999997 9999976544321
Q ss_pred HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 248 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 248 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
..........+. ....+..+.+++.+||..+|++||++.++.+.|+
T Consensus 206 ----~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 206 ----REAIEQGVRLPC---PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred ----HHHHHcCCCCCC---cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 112222222222 2345789999999999999999999999987764
No 174
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-39 Score=311.60 Aligned_cols=259 Identities=23% Similarity=0.360 Sum_probs=215.1
Q ss_pred CCceEEeeeecccCceeEEEEEEcC--CCc--eEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVD--TNE--IVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~--~~~--~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
.+..++.++||.|-||.||.|.... .|+ -||||..+.++. .+.|+.|+-+|+.+.|++++++++++.
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~------ 461 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV------ 461 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee------
Confidence 3455677899999999999998742 233 499999887643 445899999999999999999998764
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
+...+||||++ -|-|..+++.....++..+...+++||..+|.|||++++|||||..
T Consensus 462 ----------------------e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAa 519 (974)
T KOG4257|consen 462 ----------------------EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAA 519 (974)
T ss_pred ----------------------ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhh
Confidence 45679999999 8899999998778899999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GS 236 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~ 236 (449)
.|||+. ....|||+|||+++...+... |. .....-+..|||||.+.-..++.++|||-||+++||++. |.
T Consensus 520 RNiLVs---Sp~CVKLaDFGLSR~~ed~~y-----Yk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGv 590 (974)
T KOG4257|consen 520 RNILVS---SPQCVKLADFGLSRYLEDDAY-----YK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGV 590 (974)
T ss_pred hheeec---Ccceeeecccchhhhccccch-----hh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcC
Confidence 999995 788999999999998776654 22 223344678999999999999999999999999999987 99
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGY 308 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~ 308 (449)
-||++..+.+..-.+ +.....|.+ .++|+.+..|+.+||+.+|.+||.|.+|...|.+++..+..
T Consensus 591 kPfqgvkNsDVI~~i----EnGeRlP~P---~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek~ 655 (974)
T KOG4257|consen 591 KPFQGVKNSDVIGHI----ENGERLPCP---PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEKI 655 (974)
T ss_pred CccccccccceEEEe----cCCCCCCCC---CCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhhh
Confidence 999998775433222 223333333 45699999999999999999999999999999999875544
No 175
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=7e-38 Score=300.86 Aligned_cols=261 Identities=19% Similarity=0.294 Sum_probs=197.8
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCC----------------ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcc
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTN----------------EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKI 65 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~----------------~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~ 65 (449)
..++|+++++||+|+||.||+|.+..++ ..||+|++..... ...+.+|+++++.++|++++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence 3578999999999999999999886543 4589998875432 33577899999999988755
Q ss_pred eeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc----------CCCCHHHHHHH
Q 013125 66 RLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR----------RKFSLKTVLML 134 (449)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~----------~~~~~~~~~~i 134 (449)
..+ .++..+...++|||++ +++|.+++.... ..+++..++.+
T Consensus 83 ~~~---------------------------~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (296)
T cd05051 83 RLL---------------------------GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYM 135 (296)
T ss_pred EEE---------------------------EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHH
Confidence 443 3334557889999999 889999887543 26899999999
Q ss_pred HHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC
Q 013125 135 ADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI 214 (449)
Q Consensus 135 ~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 214 (449)
+.|++.||+|||++||+||||||+||+++ +.+.++|+|||+++........ .......++..|+|||++.+.
T Consensus 136 ~~~i~~al~~LH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~ 207 (296)
T cd05051 136 ATQIASGMRYLESLNFVHRDLATRNCLVG---KNYTIKIADFGMSRNLYSSDYY-----RVQGRAPLPIRWMAWESVLLG 207 (296)
T ss_pred HHHHHHHHHHHHHcCccccccchhceeec---CCCceEEccccceeecccCcce-----eecCcCCCCceecCHHHhhcC
Confidence 99999999999999999999999999994 6789999999999765433221 112344567889999999988
Q ss_pred CCCccchHHHHHHHHHHHHh--CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 215 EQSRRDDLESLGYVLLYFLR--GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 215 ~~s~~~DvwSlG~il~el~~--G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
.++.++|||||||++|||++ |..||...............................|.++.+++..||+.+|.+||++
T Consensus 208 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~ 287 (296)
T cd05051 208 KFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTF 287 (296)
T ss_pred CCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCH
Confidence 89999999999999999998 7788876543322111111100000000011123457899999999999999999999
Q ss_pred HHHHHHHH
Q 013125 293 GFLKRLFH 300 (449)
Q Consensus 293 ~~l~~~l~ 300 (449)
.+|.+.|+
T Consensus 288 ~el~~~L~ 295 (296)
T cd05051 288 REIHLFLQ 295 (296)
T ss_pred HHHHHHhc
Confidence 99987764
No 176
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.4e-37 Score=298.26 Aligned_cols=260 Identities=23% Similarity=0.321 Sum_probs=204.2
Q ss_pred ccCCceEEeeeecccCceeEEEEEEc-----CCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
+-.++|.+.+.||+|+||.||+|++. .++..|++|.+..... ...+.+|+++++.++|++++..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~--------- 72 (291)
T cd05094 2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF--------- 72 (291)
T ss_pred CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceE---------
Confidence 34578999999999999999999864 2455699998765433 2357889999999988865544
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHH
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIA 140 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------------~~~~~~~~~~i~~qil~ 140 (449)
..++...+..++||||+ +++|.+++.... ..+++..++.++.||+.
T Consensus 73 ------------------~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 134 (291)
T cd05094 73 ------------------YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIAS 134 (291)
T ss_pred ------------------EEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHH
Confidence 33445667889999999 899999886422 34889999999999999
Q ss_pred HHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccc
Q 013125 141 RIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRD 220 (449)
Q Consensus 141 ~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~ 220 (449)
||+|||++||+||||||+|||++ +++.++|+|||++......... .......++..|+|||++.+..++.++
T Consensus 135 al~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~ 206 (291)
T cd05094 135 GMVYLASQHFVHRDLATRNCLVG---ANLLVKIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTES 206 (291)
T ss_pred HHHHHHhCCeeecccCcceEEEc---cCCcEEECCCCcccccCCCcee-----ecCCCCCcceeecChHHhccCCCCchh
Confidence 99999999999999999999994 7889999999999765433211 112344567889999999998999999
Q ss_pred hHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 221 DLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 221 DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
|||||||++|||++ |..||....... ....+...... ......|..+.+++.+||..+|.+||++.++.+.|
T Consensus 207 Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l 279 (291)
T cd05094 207 DVWSFGVILWEIFTYGKQPWFQLSNTE---VIECITQGRVL----ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKIL 279 (291)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhCCCCC----CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 99999999999998 999997754432 22222222211 11234578999999999999999999999999999
Q ss_pred HHHHHh
Q 013125 300 HDLFSR 305 (449)
Q Consensus 300 ~~~~~~ 305 (449)
+++.+.
T Consensus 280 ~~~~~~ 285 (291)
T cd05094 280 HALGKA 285 (291)
T ss_pred HHHHhh
Confidence 888654
No 177
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.1e-37 Score=290.79 Aligned_cols=246 Identities=25% Similarity=0.316 Sum_probs=199.3
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.|.+.+.||+|+||.||+|.+..+++.|++|.+... .....+.+|+++++.++|++++..+.
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-------------- 66 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYE-------------- 66 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehhee--------------
Confidence 489999999999999999999999999999987643 22345778999999999887555433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
++...+..|+||||+ +++|.+++... ...++...+..++.|++.||.|||++|++|+||||+||+
T Consensus 67 -------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nil 133 (256)
T cd08529 67 -------------SFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLF 133 (256)
T ss_pred -------------eeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEE
Confidence 334567889999999 89999998764 467899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++ .++.++|+|||+++....... ......|+..|+|||++.+..++.++|+|||||++|+|++|+.||..
T Consensus 134 i~---~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 203 (256)
T cd08529 134 LD---AYDNVKIGDLGVAKLLSDNTN-------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDA 203 (256)
T ss_pred Ee---CCCCEEEcccccceeccCccc-------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 94 678999999999886654322 12345688999999999998999999999999999999999999986
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.... .....+....... .....+.++.+++..||..+|++||++.++.+
T Consensus 204 ~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 204 NNQG---ALILKIIRGVFPP----VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CCHH---HHHHHHHcCCCCC----CccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 5432 2333333322221 11245789999999999999999999987754
No 178
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.5e-37 Score=292.77 Aligned_cols=252 Identities=20% Similarity=0.311 Sum_probs=200.9
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.++|++.+.||.|+||.||+|.+..+++.+|+|++.... ....+.+|+++++.++|++++..+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~--------------- 66 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYF--------------- 66 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceE---------------
Confidence 368999999999999999999999889999999887543 234578899999999988755543
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
.+.......|++||++ +++|.+++......++...+..++.|++.||.|||++|++|+||+|+||++
T Consensus 67 ------------~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i 134 (262)
T cd06613 67 ------------GSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL 134 (262)
T ss_pred ------------EEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE
Confidence 3345677899999999 778988887655789999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC---CCCccchHHHHHHHHHHHHhCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI---EQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
++++.++|+|||++........ ......++..|++||.+.+. .++.++|||||||++|||++|..||
T Consensus 135 ---~~~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~ 204 (262)
T cd06613 135 ---TEDGDVKLADFGVSAQLTATIA-------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPM 204 (262)
T ss_pred ---CCCCCEEECccccchhhhhhhh-------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCC
Confidence 4788999999999876543221 12345788899999999877 7899999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.+...... ...+.......+........+.++.+++..||..+|.+||++.+|..
T Consensus 205 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 205 FDLHPMRA---LFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred CCCCHHHH---HHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 87553322 22222221222221222345678999999999999999999987743
No 179
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.3e-37 Score=298.34 Aligned_cols=256 Identities=18% Similarity=0.306 Sum_probs=199.8
Q ss_pred ceEEeeeecccCceeEEEEEEcC-----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
+|++.+.||+|+||.||+|.+.. ....||+|++..... ...+.+|+++++.++|++++..+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~---------- 70 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYG---------- 70 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEE----------
Confidence 58899999999999999998753 235699998765433 235778999999999887655433
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-----------------------CCCCHHHHHHHH
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-----------------------RKFSLKTVLMLA 135 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-----------------------~~~~~~~~~~i~ 135 (449)
++...+..++|+||+ +++|.+++.... ..+++.+++.++
T Consensus 71 -----------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 133 (290)
T cd05045 71 -----------------ACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFA 133 (290)
T ss_pred -----------------EEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHH
Confidence 334566789999999 799998876421 247889999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC
Q 013125 136 DQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE 215 (449)
Q Consensus 136 ~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 215 (449)
.|++.||+|||++|++||||||+|||+. +++.++|+|||+++........ .......++..|++||.+.+..
T Consensus 134 ~~i~~~l~~LH~~~ivH~dikp~nill~---~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~ 205 (290)
T cd05045 134 WQISRGMQYLAEMKLVHRDLAARNVLVA---EGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHI 205 (290)
T ss_pred HHHHHHHHHHHHCCeehhhhhhheEEEc---CCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCC
Confidence 9999999999999999999999999994 7789999999999765432211 1112334567899999999888
Q ss_pred CCccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHH
Q 013125 216 QSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294 (449)
Q Consensus 216 ~s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 294 (449)
++.++|||||||++|||++ |..||.+..... +..........+. ...++.++.+++..||+.+|.+||++.+
T Consensus 206 ~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~i~~cl~~~P~~Rp~~~~ 278 (290)
T cd05045 206 YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER----LFNLLKTGYRMER---PENCSEEMYNLMLTCWKQEPDKRPTFAD 278 (290)
T ss_pred cchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH----HHHHHhCCCCCCC---CCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 9999999999999999998 999998754332 2222222222221 2445789999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 013125 295 LKRLFHDLFSR 305 (449)
Q Consensus 295 l~~~l~~~~~~ 305 (449)
+.+.|++++..
T Consensus 279 i~~~l~~~~~~ 289 (290)
T cd05045 279 ISKELEKMMVK 289 (290)
T ss_pred HHHHHHHHHhc
Confidence 99999988753
No 180
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.1e-38 Score=301.38 Aligned_cols=254 Identities=18% Similarity=0.219 Sum_probs=198.1
Q ss_pred CCceEEeeeecccCceeEEEEEEcCC-----CceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~-----~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
..+|++.++||+|+||.||+|.+..+ ++.||||+++..... ..+.+|+.++..++|++++.+++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~-------- 75 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLG-------- 75 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEE--------
Confidence 35688999999999999999987543 578999998754332 34678888999888887665543
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---------------cCCCCHHHHHHHHHHHHHH
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---------------RRKFSLKTVLMLADQMIAR 141 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---------------~~~~~~~~~~~i~~qil~~ 141 (449)
+.......++++||+ +++|.+++... ...+++..++.++.|++.|
T Consensus 76 -------------------~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~a 136 (283)
T cd05091 76 -------------------VVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAG 136 (283)
T ss_pred -------------------EEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHH
Confidence 334556789999999 78888887531 2347888999999999999
Q ss_pred HHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccch
Q 013125 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221 (449)
Q Consensus 142 L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~D 221 (449)
|+|||++||+||||||+|||+. +++.+||+|||+++........ .......+++.|+|||++.+..++.++|
T Consensus 137 L~~lH~~gi~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~D 208 (283)
T cd05091 137 MEFLSSHHVVHKDLATRNVLVF---DKLNVKISDLGLFREVYAADYY-----KLMGNSLLPIRWMSPEAIMYGKFSIDSD 208 (283)
T ss_pred HHHHHHcCccccccchhheEec---CCCceEecccccccccccchhe-----eeccCccCCccccCHHHHhcCCCCcchh
Confidence 9999999999999999999994 6788999999998765432211 1123345678899999999888999999
Q ss_pred HHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 222 LESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 222 vwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
||||||++|||++ |..||.+.... ..+..+...... .....+|..+.+++..||+.+|.+||++.+|.+.|+
T Consensus 209 v~slG~~l~el~~~g~~p~~~~~~~---~~~~~i~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 209 IWSYGVVLWEVFSYGLQPYCGYSNQ---DVIEMIRNRQVL----PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHHcCCcC----CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 9999999999998 88999875443 233333322211 123456899999999999999999999999988876
Q ss_pred H
Q 013125 301 D 301 (449)
Q Consensus 301 ~ 301 (449)
.
T Consensus 282 ~ 282 (283)
T cd05091 282 T 282 (283)
T ss_pred C
Confidence 3
No 181
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.1e-37 Score=295.84 Aligned_cols=253 Identities=21% Similarity=0.231 Sum_probs=194.2
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.+.||+|+||.||+|++..+++.||||++..... ...+.+|+.+++.+.|+++++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-------------- 66 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQD-------------- 66 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEE--------------
Confidence 58999999999999999999998999999998764322 245788999999999887555433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR--RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~--~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
+...++..|+||||+.++|.+++.... ..++...++.++.||+.||+|||++|++||||||+||+
T Consensus 67 -------------~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil 133 (285)
T cd07861 67 -------------VLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLL 133 (285)
T ss_pred -------------EEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEE
Confidence 334567889999999889988876533 56899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
+. .++.++|+|||++........ ......++..|+|||++.+. .++.++|||||||++|+|++|++||.
T Consensus 134 ~~---~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~ 203 (285)
T cd07861 134 ID---NKGVIKLADFGLARAFGIPVR-------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFH 203 (285)
T ss_pred Ec---CCCcEEECcccceeecCCCcc-------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 94 788999999999975533211 12234568899999988754 47899999999999999999999998
Q ss_pred CChhhcHHHHHHHHHH---------------------hhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 241 GLKAATKKQKYDKICE---------------------KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~---------------------~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
+............... ..............++++.+++..||..||.+||++++|..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 204 GDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred CCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 7543221111111000 00000011122346788999999999999999999887743
No 182
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=336.23 Aligned_cols=263 Identities=25% Similarity=0.348 Sum_probs=209.7
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecC-----CCCchhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENS-----GTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
|+-.+.|.|++.||+|+||+|.+++++.|++.||+|++++ .....-|..|..+|-.-...
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~--------------- 135 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSE--------------- 135 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcH---------------
Confidence 4556789999999999999999999999999999999875 22233355666666432211
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
=|..+.+.+.+.++.|+||||+ ||+|..++.... ++++..++.|+.+|+.||.-||+.|+||||||
T Consensus 136 ------------Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiK 202 (1317)
T KOG0612|consen 136 ------------WIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIK 202 (1317)
T ss_pred ------------HHHHHHHHhcCccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCC
Confidence 1233445567889999999999 999999998766 89999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc----C-CCCCccchHHHHHHHHHH
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL----G-IEQSRRDDLESLGYVLLY 231 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~s~~~DvwSlG~il~e 231 (449)
|+|||+ |..|++||+|||.+..+....... ....+|||.|.|||++. + +.|++.||+||+||++||
T Consensus 203 PDNvLl---d~~GHikLADFGsClkm~~dG~V~------s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YE 273 (1317)
T KOG0612|consen 203 PDNVLL---DKSGHIKLADFGSCLKMDADGTVR------SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYE 273 (1317)
T ss_pred cceeEe---cccCcEeeccchhHHhcCCCCcEE------eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHH
Confidence 999999 589999999999998887665533 35778999999999886 2 568999999999999999
Q ss_pred HHhCCCCCCCChhhcHHHHHHHHHHh--hcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHHHhc
Q 013125 232 FLRGSLPWQGLKAATKKQKYDKICEK--KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD---YGFLKRLFHDLFSRE 306 (449)
Q Consensus 232 l~~G~~pf~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~---~~~l~~~l~~~~~~~ 306 (449)
|++|..||+..+- ...|.+|+.. .+.+| ... ..+++.++||...+. +|+.|.. +++|..
T Consensus 274 MlyG~TPFYadsl---veTY~KIm~hk~~l~FP-~~~--~VSeeakdLI~~ll~-~~e~RLgrngiedik~--------- 337 (1317)
T KOG0612|consen 274 MLYGETPFYADSL---VETYGKIMNHKESLSFP-DET--DVSEEAKDLIEALLC-DREVRLGRNGIEDIKN--------- 337 (1317)
T ss_pred HHcCCCcchHHHH---HHHHHHHhchhhhcCCC-ccc--ccCHHHHHHHHHHhc-ChhhhcccccHHHHHh---------
Confidence 9999999987443 4566777665 45555 221 258899999999885 7888877 665533
Q ss_pred CCCCCcccccccc
Q 013125 307 GYDFDFVFDWTIL 319 (449)
Q Consensus 307 ~~~~~~~~dw~~l 319 (449)
+.|....||..+
T Consensus 338 -HpFF~g~~W~~i 349 (1317)
T KOG0612|consen 338 -HPFFEGIDWDNI 349 (1317)
T ss_pred -CccccCCChhhh
Confidence 455566788543
No 183
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.5e-37 Score=291.14 Aligned_cols=255 Identities=23% Similarity=0.331 Sum_probs=201.6
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+|+++++.++|++++..+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~------------ 69 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLA------------ 69 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeee------------
Confidence 68999999999999999999999899999999875321 2345788999999998887554433
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
++...+..++||||+ +++|.+++... ...++..+++.++.|++.||.|||+.||+||||+|
T Consensus 70 ---------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p 134 (267)
T cd08224 70 ---------------SFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKP 134 (267)
T ss_pred ---------------eeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcCh
Confidence 334567789999999 78999888643 34589999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+||+++ .++.++|+|||++......... .....++..|+|||.+.+..++.++|||||||++|+|++|..
T Consensus 135 ~nil~~---~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~ 204 (267)
T cd08224 135 ANVFIT---ATGVVKLGDLGLGRFFSSKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 204 (267)
T ss_pred hhEEEC---CCCcEEEeccceeeeccCCCcc-------cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCC
Confidence 999994 7789999999998765443221 124567889999999999889999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
||..... ........+..... .+.+ ....+..+.+++..||..+|++||++.+|.+.|+++
T Consensus 205 p~~~~~~-~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 205 PFYGDKM-NLYSLCKKIEKCDY-PPLP--ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred CcccCCc-cHHHHHhhhhcCCC-CCCC--hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 9975432 11122222222111 1111 124578999999999999999999999998888764
No 184
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3e-38 Score=307.27 Aligned_cols=234 Identities=26% Similarity=0.345 Sum_probs=183.8
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHH-HHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAK-VYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||.||+|++..+++.||+|++.... ....+..|.. +++.++|++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~-------------------- 60 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG-------------------- 60 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccc--------------------
Confidence 47999999999999999999999999876431 1222444443 456677766444
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
+.......+..|+||||+ +++|...+.. ...++...+..++.||+.||+|||++||+||||||+|||+
T Consensus 61 -------~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll--- 129 (321)
T cd05603 61 -------LHYSFQTAEKLYFVLDYVNGGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL--- 129 (321)
T ss_pred -------eeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---
Confidence 444445677899999999 8888877764 5678999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
+.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+....
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 202 (321)
T cd05603 130 DSQGHVVLTDFGLCKEGVEPEE-------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS 202 (321)
T ss_pred CCCCCEEEccCCCCccCCCCCC-------ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH
Confidence 4788999999999875332221 123567899999999999989999999999999999999999999875432
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
..+..+.......+ ...+.++.+++..||+.+|.+|++.
T Consensus 203 ---~~~~~i~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~ 241 (321)
T cd05603 203 ---QMYDNILHKPLQLP-----GGKTVAACDLLVGLLHKDQRRRLGA 241 (321)
T ss_pred ---HHHHHHhcCCCCCC-----CCCCHHHHHHHHHHccCCHhhcCCC
Confidence 33344443333222 3447789999999999999999975
No 185
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-37 Score=292.87 Aligned_cols=250 Identities=18% Similarity=0.269 Sum_probs=197.0
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
.++|++.+.||+|+||.||+|.+.. +..||+|.+.... ..+.+.+|+.+++.++|++++..
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~----------------- 64 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQL----------------- 64 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeE-----------------
Confidence 4679999999999999999998753 4459999876543 24568899999999988865544
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
+.++......++||||+ +++|.+++......+++..++.++.||+.||.|||++|++|+||||+||++
T Consensus 65 ----------~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili- 133 (256)
T cd05113 65 ----------YGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV- 133 (256)
T ss_pred ----------EEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE-
Confidence 33445566789999999 889999887655679999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~ 242 (449)
++++.+||+|||+++........ ......++..|++||++.+..++.++|||||||++|||++ |..||...
T Consensus 134 --~~~~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~ 205 (256)
T cd05113 134 --DDQGCVKVSDFGLSRYVLDDEYT------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERF 205 (256)
T ss_pred --cCCCCEEECCCccceecCCCcee------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 47789999999998765433211 1123345678999999998889999999999999999998 99999765
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
.... ....+...... +. ....+..+.+++..||..+|.+||++.+|...+
T Consensus 206 ~~~~---~~~~~~~~~~~-~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 206 NNSE---TVEKVSQGLRL-YR---PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CHHH---HHHHHhcCCCC-CC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 4422 22233222211 11 123478999999999999999999999887654
No 186
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.5e-37 Score=299.86 Aligned_cols=259 Identities=21% Similarity=0.294 Sum_probs=202.5
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCc----eEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHV 75 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~----~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 75 (449)
.+-.++|++.+.||+|+||.||+|.+..+++ .||+|++..... ...+.+|+.+++.++|++++..++.+
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~---- 78 (303)
T cd05110 3 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVC---- 78 (303)
T ss_pred ccchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEE----
Confidence 3556789999999999999999999877776 478898765433 22467899999999998877665432
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRD 154 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrD 154 (449)
. ....++++|++ +++|.+++......++...++.++.||+.||+|||++||+|||
T Consensus 79 -----------------------~-~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~d 134 (303)
T cd05110 79 -----------------------L-SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRD 134 (303)
T ss_pred -----------------------c-CCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccc
Confidence 1 23457899999 7899999876666789999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh
Q 013125 155 IKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 155 Lkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~ 234 (449)
|||+||++. +++.+||+|||+++......... ......++..|++||++.+..++.++|||||||++|||++
T Consensus 135 ikp~Nill~---~~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t 206 (303)
T cd05110 135 LAARNVLVK---SPNHVKITDFGLARLLEGDEKEY-----NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206 (303)
T ss_pred cccceeeec---CCCceEEccccccccccCccccc-----ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHh
Confidence 999999994 67889999999998654322110 1123345678999999999899999999999999999997
Q ss_pred -CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Q 013125 235 -GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304 (449)
Q Consensus 235 -G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 304 (449)
|..||.+..... ...+.......+.+ ...+..+.+++..||..+|++||++.++.+.|+++..
T Consensus 207 ~g~~p~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 207 FGGKPYDGIPTRE----IPDLLEKGERLPQP---PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred CCCCCCCCCCHHH----HHHHHHCCCCCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 999998754322 22223333222222 2346789999999999999999999999998887644
No 187
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1e-37 Score=297.84 Aligned_cols=251 Identities=22% Similarity=0.273 Sum_probs=194.1
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|++++..+.
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~-------------- 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD-------------- 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHH--------------
Confidence 69999999999999999999999999999998764322 235678999999999987655432
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
+..+....++|+||++++|.+.+......+++..++.++.||+.||.|||++||+||||||+||++.
T Consensus 67 -------------~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~ 133 (284)
T cd07839 67 -------------VLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN 133 (284)
T ss_pred -------------HhccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc
Confidence 2345677899999998899988876667799999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
.++.++|+|||+++....... ......++..|+|||++.+.. ++.++|||||||++|||++|..||...
T Consensus 134 ---~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~ 203 (284)
T cd07839 134 ---KNGELKLADFGLARAFGIPVR-------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 203 (284)
T ss_pred ---CCCcEEECccchhhccCCCCC-------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 778999999999976543221 112446788999999987754 789999999999999999998886432
Q ss_pred hhhcHHHHHHHHHHhhcCCC------------------------HHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTP------------------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~------------------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... ...+..+........ ........++++.+++..||..||.+||+++++..
T Consensus 204 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 204 NDV--DDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCH--HHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 221 122222211110000 01122345788999999999999999999887743
No 188
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-38 Score=310.54 Aligned_cols=243 Identities=22% Similarity=0.295 Sum_probs=200.1
Q ss_pred eecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCc
Q 013125 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGI 91 (449)
Q Consensus 14 ~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 91 (449)
.||+|.||+||-|+|..|+..+|||-+..... ...+-.|+.+-+.|+|.|+++.++.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-------------------- 641 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-------------------- 641 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc--------------------
Confidence 68999999999999999999999997765433 33477899999999999988876643
Q ss_pred CeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 92 PNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKF--SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 92 ~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~--~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
.++.++-|.||-. ||+|.+++...=+++ .+.++-.+..||++||+|||+..|||||||-+|+||. .-.
T Consensus 642 -------senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TyS 712 (1226)
T KOG4279|consen 642 -------SENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYS 712 (1226)
T ss_pred -------CCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--ecc
Confidence 3445778899998 999999998655556 7888999999999999999999999999999999996 357
Q ss_pred CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC--CCccchHHHHHHHHHHHHhCCCCCCCChhhc
Q 013125 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE--QSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246 (449)
Q Consensus 169 ~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DvwSlG~il~el~~G~~pf~~~~~~~ 246 (449)
|.+||+|||.+++...-.. +..++.||..|||||++..++ |+.++|||||||++.||.||++||..+...
T Consensus 713 GvlKISDFGTsKRLAginP-------~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp- 784 (1226)
T KOG4279|consen 713 GVLKISDFGTSKRLAGINP-------CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP- 784 (1226)
T ss_pred ceEEecccccchhhccCCc-------cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh-
Confidence 8999999999987654322 236889999999999998764 899999999999999999999999865432
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
...+.++..-+..+|+++ .+..+.+.++..|+..+|.+||++++|..
T Consensus 785 -qAAMFkVGmyKvHP~iPe---elsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 785 -QAAMFKVGMYKVHPPIPE---ELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred -hHhhhhhcceecCCCCcH---HHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 234444444455555544 33788999999999999999999887643
No 189
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.5e-37 Score=292.73 Aligned_cols=258 Identities=19% Similarity=0.273 Sum_probs=201.6
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCc---eEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNE---IVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~---~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
|..++|+..+.||+|+||.||+|.+..++. .||+|.+..... ...+..|+++++.++|++++...
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~--------- 72 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE--------- 72 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEE---------
Confidence 556789999999999999999999875554 699998765422 23477899999988888755543
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.++...+..++|||++ +++|.+++......+++.++..++.|++.||+|||+.|++|||||
T Consensus 73 ------------------~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlk 134 (268)
T cd05063 73 ------------------GVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLA 134 (268)
T ss_pred ------------------EEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 3345567789999999 789999887656679999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-C
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-G 235 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G 235 (449)
|+||+++ +++.++|+|||++........... .......+..|++||++.+..++.++|||||||++|||++ |
T Consensus 135 p~Nili~---~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g 207 (268)
T cd05063 135 ARNILVN---SNLECKVSDFGLSRVLEDDPEGTY----TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFG 207 (268)
T ss_pred hhhEEEc---CCCcEEECCCccceecccccccce----eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCC
Confidence 9999994 778999999999976654322110 0112223457999999998889999999999999999997 9
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
..||...... .....+.. ....+. ....+.++.+++.+||..+|.+||++.++.+.|+++
T Consensus 208 ~~p~~~~~~~---~~~~~i~~-~~~~~~---~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 208 ERPYWDMSNH---EVMKAIND-GFRLPA---PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCcCCHH---HHHHHHhc-CCCCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 9999765432 22222222 222221 124578999999999999999999999999988765
No 190
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.1e-37 Score=292.81 Aligned_cols=246 Identities=22% Similarity=0.277 Sum_probs=197.4
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
+|++.++||.|+||.||+|.+..+++.||+|.++... ..+.+..|+.+++.++|++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~----------------- 63 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAF----------------- 63 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceE-----------------
Confidence 5899999999999999999999999999999875432 23457789999999988865443
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
...+...+..|+||||+ +++|.+++... ...++...++.++.||+.||.|||++||+|+||||+||++
T Consensus 64 ----------~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili 133 (255)
T cd08219 64 ----------KESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL 133 (255)
T ss_pred ----------EEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE
Confidence 33445677899999999 88998887643 4568999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
++++.++|+|||++......... .....++..|+|||++.+..++.++|+||||+++|+|++|..||...
T Consensus 134 ---~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~ 203 (255)
T cd08219 134 ---TQNGKVKLGDFGSARLLTSPGAY-------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN 203 (255)
T ss_pred ---CCCCcEEEcccCcceeecccccc-------cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC
Confidence 47889999999999766543221 13456889999999999988999999999999999999999999864
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... .....+...... +. ....+..+.+++..||..+|++||++.+|..
T Consensus 204 ~~~---~~~~~~~~~~~~-~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 204 SWK---NLILKVCQGSYK-PL---PSHYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred CHH---HHHHHHhcCCCC-CC---CcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 332 222222222221 11 1335778999999999999999999988755
No 191
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.3e-37 Score=293.79 Aligned_cols=261 Identities=20% Similarity=0.302 Sum_probs=205.9
Q ss_pred CcccCCceEEeeeecccCceeEEEEEEcCCCc----eEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecch
Q 013125 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDH 74 (449)
Q Consensus 2 ~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~----~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 74 (449)
-.+..++|++.+.||+|+||.||+|.+..+++ .||+|+...... ...+.+|+.+++.++|++++..++.+
T Consensus 2 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--- 78 (279)
T cd05057 2 RILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGIC--- 78 (279)
T ss_pred cccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE---
Confidence 45677899999999999999999999876654 589998765533 23577899999999998866655432
Q ss_pred hhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 013125 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHR 153 (449)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHr 153 (449)
.. ...++|+||+ +++|.+++......+++..++.++.||+.||+|||++|++||
T Consensus 79 ------------------------~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~ 133 (279)
T cd05057 79 ------------------------LS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHR 133 (279)
T ss_pred ------------------------ec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEec
Confidence 22 5778999999 899999988766679999999999999999999999999999
Q ss_pred CCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHH
Q 013125 154 DIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 233 (449)
Q Consensus 154 DLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~ 233 (449)
||||+||++ ++++.+||+|||+++......... ......++..|++||.+....++.++|+|||||++||++
T Consensus 134 di~p~nil~---~~~~~~kL~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~ 205 (279)
T cd05057 134 DLAARNVLV---KTPQHVKITDFGLAKLLDVDEKEY-----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELM 205 (279)
T ss_pred ccCcceEEE---cCCCeEEECCCcccccccCcccce-----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHh
Confidence 999999999 477899999999998665322110 011223456899999998888999999999999999999
Q ss_pred h-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 234 R-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 234 ~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
+ |..||.+....... ..+ ......+.+ ...+..+.+++..||..+|.+||++.++.+.|.++++.
T Consensus 206 ~~g~~p~~~~~~~~~~---~~~-~~~~~~~~~---~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 206 TFGAKPYEGIPAVEIP---DLL-EKGERLPQP---PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred cCCCCCCCCCCHHHHH---HHH-hCCCCCCCC---CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 8 99999876543222 222 222222222 22367899999999999999999999999999988653
No 192
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.5e-37 Score=301.48 Aligned_cols=262 Identities=19% Similarity=0.312 Sum_probs=201.9
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCC-------CceEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeec
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDT-------NEIVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHV 72 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~-------~~~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~ 72 (449)
+...+|++++.||+|+||.||+|++... ...||+|++..... ...+.+|+++++.+ +|++++..+
T Consensus 9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~---- 84 (334)
T cd05100 9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLL---- 84 (334)
T ss_pred cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeee----
Confidence 4567899999999999999999986432 23699998775432 23578899999998 677655443
Q ss_pred chhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---------------cCCCCHHHHHHHHH
Q 013125 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---------------RRKFSLKTVLMLAD 136 (449)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---------------~~~~~~~~~~~i~~ 136 (449)
.++...+..++++||+ +++|.+++... ...+++.+++.++.
T Consensus 85 -----------------------~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 141 (334)
T cd05100 85 -----------------------GACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAY 141 (334)
T ss_pred -----------------------EEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHH
Confidence 3344567789999999 88999988642 12478889999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCC
Q 013125 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ 216 (449)
Q Consensus 137 qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 216 (449)
||+.||.|||++|++||||||+|||++ .++.+||+|||+++........ .......++..|+|||++.+..+
T Consensus 142 qi~~al~~LH~~givH~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~ 213 (334)
T cd05100 142 QVARGMEYLASQKCIHRDLAARNVLVT---EDNVMKIADFGLARDVHNIDYY-----KKTTNGRLPVKWMAPEALFDRVY 213 (334)
T ss_pred HHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCcccceeccccccc-----ccccCCCcCceEcCHHHhccCCc
Confidence 999999999999999999999999994 6789999999999865443211 11122334567999999999999
Q ss_pred CccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 217 SRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 217 s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
+.++|||||||++|||++ |..||.+.... .....+.. ....+ .....+.++.+++..||..+|.+||++.+|
T Consensus 214 ~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~~~-~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~el 286 (334)
T cd05100 214 THQSDVWSFGVLLWEIFTLGGSPYPGIPVE---ELFKLLKE-GHRMD---KPANCTHELYMIMRECWHAVPSQRPTFKQL 286 (334)
T ss_pred CchhhhHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHHc-CCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 999999999999999998 89999875432 22222222 11111 123457899999999999999999999999
Q ss_pred HHHHHHHHHhcC
Q 013125 296 KRLFHDLFSREG 307 (449)
Q Consensus 296 ~~~l~~~~~~~~ 307 (449)
.+.|++++....
T Consensus 287 l~~l~~~~~~~~ 298 (334)
T cd05100 287 VEDLDRVLTVTS 298 (334)
T ss_pred HHHHHHHhhhcC
Confidence 999998876554
No 193
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.1e-37 Score=294.59 Aligned_cols=256 Identities=21% Similarity=0.320 Sum_probs=199.6
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCC-----CceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecch
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDH 74 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~-----~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 74 (449)
++..++|++.+.||+|+||.||+|.+... +..||+|....... ...+.+|+++++.++|++++..++
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~----- 76 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLG----- 76 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEE-----
Confidence 35678999999999999999999998643 47899999765432 224678899999888887555433
Q ss_pred hhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHH
Q 013125 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------RKFSLKTVLMLADQMIARIEY 144 (449)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------~~~~~~~~~~i~~qil~~L~~ 144 (449)
+.......++||||+ +++|.+++.... ..+++..++.++.||+.||.|
T Consensus 77 ----------------------~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 134 (277)
T cd05032 77 ----------------------VVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAY 134 (277)
T ss_pred ----------------------EEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 345567889999999 889999886421 236788999999999999999
Q ss_pred HHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHH
Q 013125 145 VHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLES 224 (449)
Q Consensus 145 LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwS 224 (449)
||+.||+||||||+|||++ .++.+||+|||+++....... +.......++..|+|||.+.+..++.++||||
T Consensus 135 lH~~~i~H~di~p~nill~---~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 206 (277)
T cd05032 135 LAAKKFVHRDLAARNCMVA---EDLTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWS 206 (277)
T ss_pred HHhCCccccccChheEEEc---CCCCEEECCcccchhhccCcc-----cccCCCCCccccccCHHHHhcCCCCcccchHH
Confidence 9999999999999999994 788999999999876543321 11223445678999999998888999999999
Q ss_pred HHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 225 LGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 225 lG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
|||++||+++ |..||.+..... ....+.. ...... ....+.++.+++..||..+|++||++.+|.+.|+
T Consensus 207 lG~il~el~t~g~~p~~~~~~~~---~~~~~~~-~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 207 FGVVLWEMATLAEQPYQGLSNEE---VLKFVID-GGHLDL---PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHHHhhccCCCCCccCCHHH---HHHHHhc-CCCCCC---CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 9999999998 999998754432 2222221 111111 1334789999999999999999999999988764
No 194
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.4e-37 Score=298.35 Aligned_cols=258 Identities=21% Similarity=0.310 Sum_probs=200.6
Q ss_pred ccCCceEEeeeecccCceeEEEEEEc-----CCCceEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeecch
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHVDH 74 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~ 74 (449)
+..++|.+.+.||+|+||.||+|.+. .++..||+|+++.... .+.+.+|+++++.+ +|++++..+.
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~----- 106 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLG----- 106 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEE-----
Confidence 45678999999999999999999863 3455799998765422 23478899999999 6877655543
Q ss_pred hhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 013125 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLH 152 (449)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiH 152 (449)
++...+..++||||+ +++|.+++.... ..+++.+++.++.||+.||+|||+++|+|
T Consensus 107 ----------------------~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH 164 (302)
T cd05055 107 ----------------------ACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIH 164 (302)
T ss_pred ----------------------EEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeh
Confidence 334556789999999 889999887533 34899999999999999999999999999
Q ss_pred cCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHH
Q 013125 153 RDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF 232 (449)
Q Consensus 153 rDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el 232 (449)
+||||+|||++ +++.++|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||
T Consensus 165 ~dlkp~Nil~~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el 236 (302)
T cd05055 165 RDLAARNVLLT---HGKIVKICDFGLARDIMNDSNY-----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI 236 (302)
T ss_pred hhhccceEEEc---CCCeEEECCCcccccccCCCce-----eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHH
Confidence 99999999994 7789999999999765433211 011234567889999999998999999999999999999
Q ss_pred Hh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 233 LR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 233 ~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
++ |..||.+..... .+.+........+ .....++++.+++.+||..+|++||++.++.+.|.++
T Consensus 237 ~t~g~~p~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 237 FSLGSNPYPGMPVDS---KFYKLIKEGYRMA---QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HhCCCCCcCCCCchH---HHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 98 999998754322 2222222222111 1234478999999999999999999999999988764
No 195
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.3e-37 Score=292.94 Aligned_cols=257 Identities=19% Similarity=0.277 Sum_probs=201.4
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCC---ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTN---EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~---~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
..++|++.+.||+|+||.||+|.+..++ ..||+|.++.... ...+.+|+.+++.++|++++...
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~---------- 71 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE---------- 71 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEE----------
Confidence 3578999999999999999999986444 3699998765432 23578899999999888755543
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
.++...+..|+||||+ +++|.+++......++..+++.++.|++.||.|||++|++||||||
T Consensus 72 -----------------~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp 134 (267)
T cd05066 72 -----------------GVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAA 134 (267)
T ss_pred -----------------EEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhch
Confidence 3345667889999999 8899999876666789999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GS 236 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~ 236 (449)
+|||++ .++.++|+|||++........... ......++..|++||++.+..++.++|+|||||++||+++ |.
T Consensus 135 ~nili~---~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~ 207 (267)
T cd05066 135 RNILVN---SNLVCKVSDFGLSRVLEDDPEAAY----TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 207 (267)
T ss_pred hcEEEC---CCCeEEeCCCCcccccccccceee----ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCC
Confidence 999994 778999999999987654322110 0112233568999999998889999999999999999886 99
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
.||.+..... ....+.. ....+. ....|+.+.+++.+||..+|.+||++.++.+.|.++
T Consensus 208 ~p~~~~~~~~---~~~~~~~-~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 208 RPYWEMSNQD---VIKAIEE-GYRLPA---PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCcccCCHHH---HHHHHhC-CCcCCC---CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 9998765432 2222222 222222 134578999999999999999999999999988764
No 196
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.5e-38 Score=296.11 Aligned_cols=252 Identities=18% Similarity=0.276 Sum_probs=197.1
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
..++|++.++||+|+||.||+|++..+++.||+|+++.... ...+.+|+.+++.++|++++..+.
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~------------- 73 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFG------------- 73 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEE-------------
Confidence 45689999999999999999999999999999999875432 234678899999998887655543
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
.....+..|+||||+ +++|.+++.. ...++..+++.++.|++.||.|||+.|++|+||||+||+
T Consensus 74 --------------~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil 138 (267)
T cd06645 74 --------------SYLRRDKLWICMEFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANIL 138 (267)
T ss_pred --------------EEEeCCEEEEEEeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 334567889999999 7899998865 457999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc---CCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
+ +..+.++|+|||++........ ......|+..|+|||++. ...++.++|||||||++|+|++|..|
T Consensus 139 i---~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p 208 (267)
T cd06645 139 L---TDNGHVKLADFGVSAQITATIA-------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPP 208 (267)
T ss_pred E---CCCCCEEECcceeeeEccCccc-------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCC
Confidence 9 4778999999999876543221 123557899999999874 44588999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|....... ............+.......++..+.+++..||..+|++||++++|.+
T Consensus 209 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 209 MFDLHPMR---ALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cccccchh---hHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 97644321 111111222222211111235778999999999999999999887643
No 197
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.8e-37 Score=299.42 Aligned_cols=257 Identities=19% Similarity=0.242 Sum_probs=197.6
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCce--EEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeecchhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEI--VAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~--vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~ 79 (449)
-++|++.+.||+|+||.||+|.+..++.. +|+|....... ...+.+|++++..+ +|++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~---------------- 69 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN---------------- 69 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCC----------------
Confidence 46899999999999999999998777654 57776553221 23467899999888 6665
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHH
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIE 143 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------------~~~~~~~~~~i~~qil~~L~ 143 (449)
++.+..++..++..|+||||+ +++|.+++.... ..++..+++.++.||+.||+
T Consensus 70 -----------iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ 138 (303)
T cd05088 70 -----------IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 138 (303)
T ss_pred -----------cceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHH
Confidence 444444556677899999999 899999886532 25789999999999999999
Q ss_pred HHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHH
Q 013125 144 YVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLE 223 (449)
Q Consensus 144 ~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~Dvw 223 (449)
|||++||+||||||+|||++ .++.+||+|||++....... ......++..|+|||++.+..++.++|||
T Consensus 139 ~LH~~gi~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 207 (303)
T cd05088 139 YLSQKQFIHRDLAARNILVG---ENYVAKIADFGLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVW 207 (303)
T ss_pred HHHhCCccccccchheEEec---CCCcEEeCccccCcccchhh--------hcccCCCcccccCHHHHhccCCcccccch
Confidence 99999999999999999994 77899999999986322110 01122346679999999888899999999
Q ss_pred HHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 224 SLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 224 SlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
||||++|||++ |..||.+..... ....+.. .... ......++++.+++..||..+|++||++.++...|+.+
T Consensus 208 slG~il~ellt~g~~p~~~~~~~~---~~~~~~~-~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 208 SYGVLLWEIVSLGGTPYCGMTCAE---LYEKLPQ-GYRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred hhhhHHHHHHhcCCCCcccCChHH---HHHHHhc-CCcC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 99999999998 999998754432 2222211 1111 11234578899999999999999999999999988887
Q ss_pred HHhcC
Q 013125 303 FSREG 307 (449)
Q Consensus 303 ~~~~~ 307 (449)
+....
T Consensus 281 ~~~~~ 285 (303)
T cd05088 281 LEERK 285 (303)
T ss_pred HHhhh
Confidence 66543
No 198
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.8e-37 Score=298.78 Aligned_cols=202 Identities=21% Similarity=0.298 Sum_probs=162.4
Q ss_pred eeeecccCceeEEEEEEcC--CCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 12 GRKIGSGSFGEIFLASHVD--TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~--~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
+.+||+|+||+||+|++.. ++..||+|.+........+.+|+++++.++|++++.......
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----------------- 68 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFL----------------- 68 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEe-----------------
Confidence 4689999999999999753 567899998876555567889999999999998776544321
Q ss_pred CcCeeEEecccCCeeEEEEecCCCCHHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC--------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~--------~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
.......|+|+||++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 69 --------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil 140 (317)
T cd07867 69 --------SHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANIL 140 (317)
T ss_pred --------ccCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEE
Confidence 1245678999999999998887532 124788999999999999999999999999999999999
Q ss_pred eecC-CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCC
Q 013125 162 MGLG-RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 162 l~~~-~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+... +..+.+||+|||+++........ ........+|..|+|||++.+. .++.++|||||||++|||++|.+||
T Consensus 141 ~~~~~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 141 VMGEGPERGRVKIADMGFARLFNSPLKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred EccCCCCCCcEEEeeccceeccCCCccc----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 9432 35678999999999876543221 1122356789999999998874 5899999999999999999999999
Q ss_pred CCC
Q 013125 240 QGL 242 (449)
Q Consensus 240 ~~~ 242 (449)
...
T Consensus 217 ~~~ 219 (317)
T cd07867 217 HCR 219 (317)
T ss_pred ccc
Confidence 753
No 199
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.6e-37 Score=296.09 Aligned_cols=244 Identities=22% Similarity=0.313 Sum_probs=191.0
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|++++..++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~-------------- 66 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYG-------------- 66 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEE--------------
Confidence 468999999999999999999999999999998865422 234778999999999887655443
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+....+..++||||+ +++|..+ ..++...+..++.|++.||.|||+.||+|+||||+|||+
T Consensus 67 -------------~~~~~~~~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill 128 (279)
T cd06619 67 -------------AFFVENRISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV 128 (279)
T ss_pred -------------EEEECCEEEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE
Confidence 334567789999999 6666432 347888999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+ .++.++|+|||++....... .....+|..|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 129 ~---~~~~~~l~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 196 (279)
T cd06619 129 N---TRGQVKLCDFGVSTQLVNSI---------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQI 196 (279)
T ss_pred C---CCCCEEEeeCCcceeccccc---------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhh
Confidence 4 78899999999997654332 13457899999999999999999999999999999999999999753
Q ss_pred hhhcH----HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATK----KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..... ......+... .+........++++.+++..||..+|.+||+++++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 197 QKNQGSLMPLQLLQCIVDE---DPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred cccccccchHHHHHHHhcc---CCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 32211 1111111111 1111112335678999999999999999999887754
No 200
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=299.46 Aligned_cols=247 Identities=19% Similarity=0.296 Sum_probs=205.9
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
-|.++++||+|+||.||+|.+..+|+.||||.+.-+.+..++.+|+.+++....+..+++++.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGS----------------- 96 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGS----------------- 96 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhh-----------------
Confidence 467889999999999999999999999999998888888899999999999887765544332
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
.-.....+|||||| .|+..+++...++++++.++..+++..+.||+|||...-||||||..|||+ +
T Consensus 97 ----------YFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---N 163 (502)
T KOG0574|consen 97 ----------YFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---N 163 (502)
T ss_pred ----------hccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---c
Confidence 22446789999999 789999999888999999999999999999999999999999999999999 5
Q ss_pred CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhc
Q 013125 167 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246 (449)
Q Consensus 167 ~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~ 246 (449)
..+..||+|||.|-.+++.... .+++.||+.|||||++....|+.++||||||++..||..|++||....+.
T Consensus 164 T~G~AKLADFGVAGQLTDTMAK-------RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM- 235 (502)
T KOG0574|consen 164 TDGIAKLADFGVAGQLTDTMAK-------RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM- 235 (502)
T ss_pred ccchhhhhhccccchhhhhHHh-------hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc-
Confidence 8899999999999776654332 36889999999999999999999999999999999999999999876543
Q ss_pred HHHHHHHHHHhhcCCCH-HHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 247 KKQKYDKICEKKVSTPI-EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
+.|......+|+ -.-.+.++.+|.+++..||-.+|++|.++.+|.+
T Consensus 236 -----RAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 236 -----RAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred -----ceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 222211112221 1111234788999999999999999998776644
No 201
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.1e-37 Score=294.72 Aligned_cols=255 Identities=24% Similarity=0.307 Sum_probs=201.0
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.+.||.|+||.||+|.+..+++.||||.+.... ....+.+|+++++.++|++++..
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~-------------- 67 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY-------------- 67 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhh--------------
Confidence 57899999999999999999998899999999765421 12357789999999988875543
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
..++...+..+++||++ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||||
T Consensus 68 -------------~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p 134 (267)
T cd08229 68 -------------YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKP 134 (267)
T ss_pred -------------hheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 33345567889999999 78999888642 34589999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+||++. .++.++|+|||++......... .....++..|+|||++.+..++.++|+||||+++|+|++|..
T Consensus 135 ~nili~---~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~ 204 (267)
T cd08229 135 ANVFIT---ATGVVKLGDLGLGRFFSSKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 204 (267)
T ss_pred HHEEEc---CCCCEEECcchhhhccccCCcc-------cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCC
Confidence 999994 7789999999998765433221 124568899999999999889999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
||.+.... .......+...... +......+.++.+++.+||..+|.+||++.+|.+.++++
T Consensus 205 p~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 205 PFYGDKMN-LYSLCKKIEQCDYP---PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred Ccccccch-HHHHhhhhhcCCCC---CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 99764321 11222222111111 111234578999999999999999999999999888765
No 202
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.5e-37 Score=298.15 Aligned_cols=252 Identities=17% Similarity=0.297 Sum_probs=196.2
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
..++.|+++++||.|+||.||+|++..+++.||+|++..... ...+.+|+++++.++|++++....
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~------------ 76 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLG------------ 76 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEE------------
Confidence 356789999999999999999999999999999999865432 234678999999999887555433
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
++..+...|+||||+ +++|..++......++...++.++.||+.+|.|||+.|++||||||+||
T Consensus 77 ---------------~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Ni 141 (292)
T cd06644 77 ---------------AFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNV 141 (292)
T ss_pred ---------------EEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceE
Confidence 334556889999999 7788777766566799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-----CCCCCccchHHHHHHHHHHHHhC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlG~il~el~~G 235 (449)
+++ .++.++|+|||++........ ......++..|+|||++. ...++.++|||||||++|||++|
T Consensus 142 li~---~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g 211 (292)
T cd06644 142 LLT---LDGDIKLADFGVSAKNVKTLQ-------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQI 211 (292)
T ss_pred EEc---CCCCEEEccCccceecccccc-------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcC
Confidence 994 688999999999875433211 123456788999999885 34478899999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..||...... ..+..+... ..+.......++.++.+++..||..+|++||+++++.+
T Consensus 212 ~~p~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 212 EPPHHELNPM---RVLLKIAKS--EPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CCCCccccHH---HHHHHHhcC--CCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 9999765432 222222111 11111112345678999999999999999999887743
No 203
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.1e-37 Score=292.29 Aligned_cols=258 Identities=19% Similarity=0.301 Sum_probs=200.3
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCc---eEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNE---IVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~---~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
.+.|++.+.||+|+||.||+|.+..+++ .||||+++.... ...+..|+.+++.++|++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~----------- 71 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE----------- 71 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEE-----------
Confidence 4679999999999999999999876554 599999875422 23578899999999988755543
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
.+...+...++||||+ +++|.+++......++..+++.++.|++.||+|||++|++||||||+
T Consensus 72 ----------------~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~ 135 (269)
T cd05065 72 ----------------GVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAAR 135 (269)
T ss_pred ----------------EEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChh
Confidence 3345667789999999 78999988766667999999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSL 237 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~ 237 (449)
||++ +.++.++|+|||++.......... .+........+..|++||.+.+..++.++|||||||++|||++ |..
T Consensus 136 nili---~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~ 210 (269)
T cd05065 136 NILV---NSNLVCKVSDFGLSRFLEDDTSDP--TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 210 (269)
T ss_pred eEEE---cCCCcEEECCCccccccccCcccc--ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCC
Confidence 9999 477899999999987654322111 0000111122457999999999899999999999999999886 999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
||....... ....+ ......+.. ..+|..+.+++..||..+|.+||++++|...|+.+
T Consensus 211 p~~~~~~~~---~~~~i-~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 211 PYWDMSNQD---VINAI-EQDYRLPPP---MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCCCCCHHH---HHHHH-HcCCcCCCc---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 998755432 22222 222222222 34578999999999999999999999998887754
No 204
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.8e-38 Score=295.73 Aligned_cols=251 Identities=22% Similarity=0.343 Sum_probs=201.6
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
..+|+++++||.|+||.||+|.+.. ++.||+|++..... ...+..|+.+++.++|++++..
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~---------------- 67 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL---------------- 67 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhhe----------------
Confidence 4679999999999999999999977 88899999876533 4467889999999988765543
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
..+....+..++||||+ +++|.+++... +..++...++.++.||+.||.|||+.|++||||||+||+
T Consensus 68 -----------~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nil 136 (261)
T cd05148 68 -----------FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNIL 136 (261)
T ss_pred -----------eeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEE
Confidence 33345667889999999 88999998753 456899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQ 240 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~ 240 (449)
++ +++.++|+|||++......... .....++..|++||++.+..++.++||||||+++|+|++ |+.||.
T Consensus 137 v~---~~~~~kl~d~g~~~~~~~~~~~-------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~ 206 (261)
T cd05148 137 VG---EDLVCKVADFGLARLIKEDVYL-------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYP 206 (261)
T ss_pred Ec---CCceEEEccccchhhcCCcccc-------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 94 7889999999999765432211 123345678999999998889999999999999999998 899998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
+.... +.+..+.. ....+. ...+++.+.+++..||..+|.+||++.+|.+.|+.
T Consensus 207 ~~~~~---~~~~~~~~-~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 207 GMNNH---EVYDQITA-GYRMPC---PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred cCCHH---HHHHHHHh-CCcCCC---CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 75532 23333322 222222 23457899999999999999999999999988864
No 205
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.8e-37 Score=294.21 Aligned_cols=256 Identities=18% Similarity=0.285 Sum_probs=196.7
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
..++|++.+.||+|+||+||+|.+..+++.||+|+...... ...+..|+.+++.+ +|++++...+......
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~------- 76 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN------- 76 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecC-------
Confidence 46789999999999999999999999999999999865432 34578899999888 5777666554332110
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
........|+||||+ +++|.+++... ...+++..++.++.|++.||.|||+++|+||||||+||
T Consensus 77 --------------~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~ni 142 (272)
T cd06637 77 --------------PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV 142 (272)
T ss_pred --------------CCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHE
Confidence 001135689999999 78999988753 35689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-----CCCCCccchHHHHHHHHHHHHhC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlG~il~el~~G 235 (449)
++. +++.++|+|||++........ ......|+..|+|||++. +..++.++|||||||++|||++|
T Consensus 143 li~---~~~~~~l~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g 212 (272)
T cd06637 143 LLT---ENAEVKLVDFGVSAQLDRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 212 (272)
T ss_pred EEC---CCCCEEEccCCCceecccccc-------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhC
Confidence 994 778999999999976543221 123567899999999986 34588899999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..||......... ..+.... ........++.++.+++..||..+|.+||++.++..
T Consensus 213 ~~p~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 213 APPLCDMHPMRAL---FLIPRNP---APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCccccCHHHHH---HHHhcCC---CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 9999764432211 1111111 111122345789999999999999999999887743
No 206
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.3e-37 Score=295.22 Aligned_cols=258 Identities=22% Similarity=0.324 Sum_probs=198.3
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcC-----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHV 75 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 75 (449)
+..++|++.++||+|+||.||+|.+.. .+..||+|+++.... ...+.+|+.+++.++|++++.++.
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~------ 76 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLG------ 76 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEE------
Confidence 556899999999999999999997642 345799998764432 224677888999998887555433
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHH
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------RKFSLKTVLMLADQMIARIEYV 145 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------~~~~~~~~~~i~~qil~~L~~L 145 (449)
+....+..|+||||+ +++|.+++.... ..++...+..++.||+.||.||
T Consensus 77 ---------------------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 135 (288)
T cd05061 77 ---------------------VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 135 (288)
T ss_pred ---------------------EEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334556789999999 899999987532 2356778899999999999999
Q ss_pred HhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHH
Q 013125 146 HSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESL 225 (449)
Q Consensus 146 H~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSl 225 (449)
|++||+||||||+||+++ +++.++|+|||+++........ .......++..|+|||.+.+..++.++|||||
T Consensus 136 H~~~i~H~dikp~nili~---~~~~~~L~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dvwsl 207 (288)
T cd05061 136 NAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSF 207 (288)
T ss_pred HhCCCcCCCCChheEEEc---CCCcEEECcCCccccccccccc-----cccCCCcccccccCHHHhccCCCChHhHHHHH
Confidence 999999999999999994 7889999999998765432211 11223345678999999998889999999999
Q ss_pred HHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Q 013125 226 GYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303 (449)
Q Consensus 226 G~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~ 303 (449)
||++|||++ |..||.+..... ....+...... . .....++.+.+++..||..+|.+||++.++.+.|++.+
T Consensus 208 G~~l~el~~~~~~p~~~~~~~~---~~~~~~~~~~~-~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 208 GVVLWEITSLAEQPYQGLSNEQ---VLKFVMDGGYL-D---QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCCCC-C---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 999999998 789998754432 22222222111 1 12345789999999999999999999999988887653
No 207
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=314.68 Aligned_cols=248 Identities=18% Similarity=0.333 Sum_probs=200.3
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
+.|.|+..||.|+||.||+|..+.++-..|-|++.... ..+.++-|++||....|++++.++.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~--------------- 96 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLS--------------- 96 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHH---------------
Confidence 45788899999999999999999898889999876543 3445788999999888887665432
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
....++.++|+.||| ||-...++...++.++..++..+++|++.||.|||+++|||||||+.|||++
T Consensus 97 ------------ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T 164 (1187)
T KOG0579|consen 97 ------------AYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT 164 (1187)
T ss_pred ------------HHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE
Confidence 234567899999999 6777777778899999999999999999999999999999999999999997
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-----CCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
-+|.|+|+|||.+....... ....++.||+.|||||+.. +.+|++++||||||++|.||..+.+|
T Consensus 165 ---ldGdirLADFGVSAKn~~t~-------qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPP 234 (1187)
T KOG0579|consen 165 ---LDGDIRLADFGVSAKNKSTR-------QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPP 234 (1187)
T ss_pred ---ecCcEeeecccccccchhHH-------hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCC
Confidence 67899999999986443322 1235889999999999764 67899999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHh-hccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVL-CKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
....++....- +| .-+.|+..+ ...+...|.+++..||..||..||+..+|.+
T Consensus 235 HhelnpMRVll---Ki---aKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 235 HHELNPMRVLL---KI---AKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ccccchHHHHH---HH---hhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 88766542222 22 222333322 3456789999999999999999999887643
No 208
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3e-37 Score=294.72 Aligned_cols=262 Identities=23% Similarity=0.276 Sum_probs=198.2
Q ss_pred CCceEEeeeecccCceeEEEEEE----cCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASH----VDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~----~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
..+|++.+.||+|+||.||+|.. ..+++.||+|.+..... ...+.+|+++++.++|++++...+.+.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 75 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCY------- 75 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEc-------
Confidence 56899999999999999999974 45788999999765432 235788999999999988766544321
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
.......++|+||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+
T Consensus 76 ------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~ 137 (284)
T cd05081 76 ------------------SAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATR 137 (284)
T ss_pred ------------------cCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHh
Confidence 12345689999999 89999998765667899999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
||++ ++++.++|+|||++......... +.......++..|+|||++.+..++.++|||||||++|||++|..+
T Consensus 138 nili---~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~ 210 (284)
T cd05081 138 NILV---ESENRVKIGDFGLTKVLPQDKEY----YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDK 210 (284)
T ss_pred hEEE---CCCCeEEECCCcccccccCCCcc----eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCc
Confidence 9999 47789999999999866433221 0111122344569999999988899999999999999999998777
Q ss_pred CCCChhhc------------HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 239 WQGLKAAT------------KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 239 f~~~~~~~------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
+....... ....+..++......+ ....++.++.+++..||..+|++||++.+|...|+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 211 SCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLP---APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CCCcchhhhhhcccccccccchHHHHHHHhcCCcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 64322110 0000111111111111 1234578999999999999999999999998887653
No 209
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.2e-37 Score=291.26 Aligned_cols=250 Identities=21% Similarity=0.297 Sum_probs=196.4
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
..+|++.+.||+|+||.||+|.+. ++..+|+|++.... ....+.+|+++++.++|++++..
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~----------------- 64 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQL----------------- 64 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEE-----------------
Confidence 357999999999999999999875 46679999876543 23467889999999988875543
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
..++...+..|+|||++ +++|.+++......+++..++.++.||+.||.|||+.|++||||||+||++
T Consensus 65 ----------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i- 133 (256)
T cd05059 65 ----------YGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV- 133 (256)
T ss_pred ----------EEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE-
Confidence 33345567789999999 889999887655678999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~ 242 (449)
++++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 134 --~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 205 (256)
T cd05059 134 --GEDNVVKVSDFGLARYVLDDQYT------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERF 205 (256)
T ss_pred --CCCCcEEECCcccceeccccccc------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCC
Confidence 47889999999998765432211 0112234567999999998899999999999999999999 89999865
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
.... ....+. .....+. ....+.++.+++.+||..+|++||++.++.+.|
T Consensus 206 ~~~~---~~~~~~-~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 206 SNSE---VVESVS-AGYRLYR---PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CHHH---HHHHHH-cCCcCCC---CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 4432 222221 1211111 134588999999999999999999999887654
No 210
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.7e-37 Score=302.56 Aligned_cols=262 Identities=20% Similarity=0.227 Sum_probs=197.7
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++++|++.++||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.++|++++.........
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 75 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPP------- 75 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecc-------
Confidence 56899999999999999999999999999999998764322 23467899999999998877654332111
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
........|+|+|+++++|.+++. ...++...++.++.|++.||.|||+.||+||||||+|||
T Consensus 76 ---------------~~~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nil 138 (336)
T cd07849 76 ---------------SFESFNDVYIVQELMETDLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLL 138 (336)
T ss_pred ---------------cccccceEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEE
Confidence 011235679999999888888775 457999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
+ +..+.++|+|||++........... ......||..|+|||++.+ ..++.++|||||||++|+|++|+.||.
T Consensus 139 l---~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~ 211 (336)
T cd07849 139 L---NTNCDLKICDFGLARIADPEHDHTG----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFP 211 (336)
T ss_pred E---CCCCCEEECcccceeeccccccccC----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9 4788999999999987544322111 1234578999999998765 468999999999999999999999997
Q ss_pred CChhhcHHHHHHHHHH-----------------------hhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 241 GLKAATKKQKYDKICE-----------------------KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
+.........+..+.. .....+........+.++.+++..||..+|++||++.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~ 291 (336)
T cd07849 212 GKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA 291 (336)
T ss_pred CCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 6433221111111000 00011112223445678999999999999999999988755
No 211
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.9e-37 Score=290.35 Aligned_cols=250 Identities=24% Similarity=0.335 Sum_probs=197.3
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-------chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-------HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
+.|++.+.||+|+||.||.|.+..+++.||+|++..... ...+.+|+++++.++|++++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~---------- 71 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYG---------- 71 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEE----------
Confidence 579999999999999999999999999999998764321 224677999999998887554433
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
+....+..++|+|++ +++|.+++.. ...++...++.++.|++.||.|||+.||+||||+|+
T Consensus 72 -----------------~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~ 133 (263)
T cd06625 72 -----------------CLRDDETLSIFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGA 133 (263)
T ss_pred -----------------EEccCCeEEEEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 345567899999999 8899988875 456899999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
||+++ +++.++|+|||+++.......... ......++..|+|||++.+..++.++||||||+++|||++|+.|
T Consensus 134 nilv~---~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 206 (263)
T cd06625 134 NILRD---SAGNVKLGDFGASKRLQTICSSGT----GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPP 206 (263)
T ss_pred HEEEc---CCCCEEEeecccceeccccccccc----cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 99994 778999999999976543221100 01245678899999999999999999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|...... .....+...... .......+..+.+++..||..+|.+||++.++.+
T Consensus 207 ~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 207 WAEFEAM---AAIFKIATQPTN---PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred ccccchH---HHHHHHhccCCC---CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 9765332 222222222111 1223456789999999999999999999887754
No 212
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.1e-37 Score=295.41 Aligned_cols=255 Identities=23% Similarity=0.339 Sum_probs=198.7
Q ss_pred ccCCceEEeeeecccCceeEEEEEEc-----CCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
|-..+|++.++||+|+||.||+|... .++..||+|.+..... ...+.+|+++++.++|++++..+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-------- 73 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFY-------- 73 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEE--------
Confidence 45678999999999999999999753 3466799998764432 33588899999999988755543
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc--------------CCCCHHHHHHHHHHHHHH
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR--------------RKFSLKTVLMLADQMIAR 141 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~--------------~~~~~~~~~~i~~qil~~ 141 (449)
.++......+++|||+ +++|.+++.... ..+++..++.++.||+.|
T Consensus 74 -------------------~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a 134 (280)
T cd05092 74 -------------------GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASG 134 (280)
T ss_pred -------------------EEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHH
Confidence 3345567789999999 889999886532 247899999999999999
Q ss_pred HHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccch
Q 013125 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDD 221 (449)
Q Consensus 142 L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~D 221 (449)
|+|||++|++||||||+|||++ +++.++|+|||++........ ++......++..|+|||++.+..++.++|
T Consensus 135 l~~LH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 206 (280)
T cd05092 135 MVYLASLHFVHRDLATRNCLVG---QGLVVKIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESD 206 (280)
T ss_pred HHHHHHCCeecccccHhhEEEc---CCCCEEECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhh
Confidence 9999999999999999999994 788999999999976543221 11223344578899999999989999999
Q ss_pred HHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 222 LESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 222 vwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
||||||++|||++ |.+||....... ....+.... ... ....+|+.+.+++..||..+|.+||++++|.+.|+
T Consensus 207 i~slG~il~el~~~g~~p~~~~~~~~---~~~~~~~~~-~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 207 IWSFGVVLWEIFTYGKQPWYQLSNTE---AIECITQGR-ELE---RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHHHHHHcCCCCCCccCCHHH---HHHHHHcCc-cCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 9999999999998 999997654332 222222211 111 11345789999999999999999999999987764
No 213
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.2e-37 Score=296.67 Aligned_cols=255 Identities=19% Similarity=0.252 Sum_probs=197.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCc--eEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNE--IVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~--~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~ 80 (449)
++|++.+.||+|+||.||+|.+..++. .+++|.++.... ...+.+|++++..+ +|++++..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~------------- 68 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINL------------- 68 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhhe-------------
Confidence 579999999999999999999876654 478887764222 23577899999888 56665443
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHH
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEY 144 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------------~~~~~~~~~~i~~qil~~L~~ 144 (449)
..+.......|+|+||+ +++|.+++.... ..+++..++.++.||+.||+|
T Consensus 69 --------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~ 134 (297)
T cd05089 69 --------------LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQY 134 (297)
T ss_pred --------------EEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHH
Confidence 33345566789999999 889999886432 348899999999999999999
Q ss_pred HHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHH
Q 013125 145 VHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLES 224 (449)
Q Consensus 145 LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwS 224 (449)
||++||+||||||+|||++ +++.+||+|||++........ ......+..|+|||++.+..++.++||||
T Consensus 135 lH~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwS 203 (297)
T cd05089 135 LSEKQFIHRDLAARNVLVG---ENLASKIADFGLSRGEEVYVK--------KTMGRLPVRWMAIESLNYSVYTTKSDVWS 203 (297)
T ss_pred HHHCCcccCcCCcceEEEC---CCCeEEECCcCCCccccceec--------cCCCCcCccccCchhhccCCCCchhhHHH
Confidence 9999999999999999994 678999999999864321110 11223355799999999888999999999
Q ss_pred HHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Q 013125 225 LGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303 (449)
Q Consensus 225 lG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~ 303 (449)
|||++|||++ |..||.+..... ....+... ...+ ....++..+.+++..||..+|.+||++.++.+.|+.++
T Consensus 204 lG~il~el~t~g~~pf~~~~~~~---~~~~~~~~-~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 204 FGVLLWEIVSLGGTPYCGMTCAE---LYEKLPQG-YRME---KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred HHHHHHHHHcCCCCCCCCCCHHH---HHHHHhcC-CCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 9999999997 999998754432 22222221 1111 12345789999999999999999999999999998887
Q ss_pred Hhc
Q 013125 304 SRE 306 (449)
Q Consensus 304 ~~~ 306 (449)
...
T Consensus 277 ~~~ 279 (297)
T cd05089 277 EAR 279 (297)
T ss_pred Hhh
Confidence 654
No 214
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.5e-37 Score=292.92 Aligned_cols=260 Identities=21% Similarity=0.304 Sum_probs=204.1
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcC----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVD----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~----~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
+-+++|++.+.||+|+||.||+|.+.. ++..|++|++..... ...+.+|+.+++.++|++++..++.+
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~----- 77 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVC----- 77 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----
Confidence 557899999999999999999999875 357899998765432 23467899999999999876654432
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-------RKFSLKTVLMLADQMIARIEYVHSR 148 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-------~~~~~~~~~~i~~qil~~L~~LH~~ 148 (449)
.......+++++++ +++|.+++.... ..++..+++.++.||+.||+|||+.
T Consensus 78 ---------------------~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~ 136 (280)
T cd05043 78 ---------------------IEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR 136 (280)
T ss_pred ---------------------ecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 12346678999998 789999887542 4589999999999999999999999
Q ss_pred CccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHH
Q 013125 149 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYV 228 (449)
Q Consensus 149 giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~i 228 (449)
+++||||||+||+++ +++.+||+|||+++.+....... ......++..|+|||++.+..++.++|||||||+
T Consensus 137 ~i~H~di~p~nil~~---~~~~~kl~d~g~~~~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~ 208 (280)
T cd05043 137 GVIHKDIAARNCVID---EELQVKITDNALSRDLFPMDYHC-----LGDNENRPVKWMALESLVNKEYSSASDVWSFGVL 208 (280)
T ss_pred CEeecccCHhhEEEc---CCCcEEECCCCCcccccCCceEE-----eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHH
Confidence 999999999999994 77899999999998654332110 0123345678999999999899999999999999
Q ss_pred HHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Q 013125 229 LLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304 (449)
Q Consensus 229 l~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 304 (449)
+||+++ |+.||....... .... ......... ...+|+++.+++.+||..+|++||++.++.+.|+++.+
T Consensus 209 l~el~~~g~~p~~~~~~~~---~~~~-~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 209 LWELMTLGQTPYVEIDPFE---MAAY-LKDGYRLAQ---PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HHHHhcCCCCCcCcCCHHH---HHHH-HHcCCCCCC---CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 999998 999998754432 2211 222222221 13357899999999999999999999999999988764
No 215
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.4e-37 Score=297.47 Aligned_cols=260 Identities=19% Similarity=0.306 Sum_probs=201.6
Q ss_pred ccCCceEEeeeecccCceeEEEEEEc-------CCCceEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeec
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHV-------DTNEIVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHV 72 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~-------~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~ 72 (449)
+..++|.+.+.||+|+||.||+|++. ..+..||+|+...... ...+.+|+.+++.+ +|++++..
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~----- 86 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL----- 86 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchhe-----
Confidence 45688999999999999999999753 2345799998764322 23578899999998 67765544
Q ss_pred chhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------------CCCCHHHHHHHHH
Q 013125 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLAD 136 (449)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------------~~~~~~~~~~i~~ 136 (449)
..+.......++||||+ +++|.+++.... ..+++.+++.++.
T Consensus 87 ----------------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (304)
T cd05101 87 ----------------------LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTY 144 (304)
T ss_pred ----------------------eEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHH
Confidence 33345567789999999 889999887532 2478889999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCC
Q 013125 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ 216 (449)
Q Consensus 137 qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 216 (449)
||+.||.|||++||+||||||+||+++ +++.+||+|||+++......... ......++..|+|||++.+..+
T Consensus 145 qi~~al~~LH~~givH~dlkp~Nili~---~~~~~kl~D~g~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~ 216 (304)
T cd05101 145 QVARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDVNNIDYYK-----KTTNGRLPVKWMAPEALFDRVY 216 (304)
T ss_pred HHHHHHHHHHHCCeeecccccceEEEc---CCCcEEECCCccceecccccccc-----cccCCCCCceeeCchhhccCCC
Confidence 999999999999999999999999994 77899999999998765432211 1123345678999999998889
Q ss_pred CccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 217 SRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 217 s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
+.++||||||+++|||++ |..||.+.... +....+.. ..... ....++.++.+++..||..+|.+||++.++
T Consensus 217 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~-~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~ 289 (304)
T cd05101 217 THQSDVWSFGVLMWEIFTLGGSPYPGIPVE---ELFKLLKE-GHRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQL 289 (304)
T ss_pred CchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHHc-CCcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 999999999999999998 88899775432 22222221 11111 123557899999999999999999999999
Q ss_pred HHHHHHHHHh
Q 013125 296 KRLFHDLFSR 305 (449)
Q Consensus 296 ~~~l~~~~~~ 305 (449)
.+.|++++..
T Consensus 290 l~~l~~~~~~ 299 (304)
T cd05101 290 VEDLDRILTL 299 (304)
T ss_pred HHHHHHHHHh
Confidence 9999888664
No 216
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.2e-37 Score=295.89 Aligned_cols=258 Identities=20% Similarity=0.321 Sum_probs=199.9
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCC-----CceEEEEEecCCCCc---hhHHHHHHHHHHH-cCCCcceeeEeecch
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTKH---PQLLYEAKVYKIL-QGGSKIRLVVFHVDH 74 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~-----~~~vAvKv~~~~~~~---~~~~~E~~~l~~l-~~~~~~~~~~~~~~~ 74 (449)
+-.++|++.+.||+|+||.||+|.+... ...||+|+....... ..+.+|+++++.+ +|++++..+.
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~----- 83 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG----- 83 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEE-----
Confidence 4568999999999999999999998643 368999988754322 2477899999988 6776554433
Q ss_pred hhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---------------cCCCCHHHHHHHHHHH
Q 013125 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---------------RRKFSLKTVLMLADQM 138 (449)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---------------~~~~~~~~~~~i~~qi 138 (449)
+.......+++|||+ +++|.+++... ...+++..++.++.||
T Consensus 84 ----------------------~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 141 (293)
T cd05053 84 ----------------------VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQV 141 (293)
T ss_pred ----------------------EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHH
Confidence 334566789999999 88999988632 3468999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCc
Q 013125 139 IARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSR 218 (449)
Q Consensus 139 l~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 218 (449)
+.||+|||++||+||||||+||+++ +++.+||+|||+++........ .......++..|+|||++.+..++.
T Consensus 142 ~~al~~LH~~~ivH~dlkp~Nil~~---~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~ 213 (293)
T cd05053 142 ARGMEFLASKKCIHRDLAARNVLVT---EDHVMKIADFGLARDIHHIDYY-----RKTTNGRLPVKWMAPEALFDRVYTH 213 (293)
T ss_pred HHHHHHHHHCCccccccceeeEEEc---CCCeEEeCccccccccccccce-----eccCCCCCCccccCHHHhccCCcCc
Confidence 9999999999999999999999994 7889999999999866543211 1112234567899999999889999
Q ss_pred cchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 219 RDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 219 ~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
++|||||||++|||++ |..||.+..... ....+ ....... .....+..+.+++..||..+|.+||++.++.+
T Consensus 214 ~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~ 286 (293)
T cd05053 214 QSDVWSFGVLLWEIFTLGGSPYPGIPVEE---LFKLL-KEGYRME---KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVE 286 (293)
T ss_pred ccceeehhhHHHHHhcCCCCCCCCCCHHH---HHHHH-HcCCcCC---CCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 9999999999999997 999998754322 22222 1111111 12344789999999999999999999999999
Q ss_pred HHHHHH
Q 013125 298 LFHDLF 303 (449)
Q Consensus 298 ~l~~~~ 303 (449)
.|++++
T Consensus 287 ~l~~~~ 292 (293)
T cd05053 287 DLDRML 292 (293)
T ss_pred HHHHhh
Confidence 888664
No 217
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=8e-37 Score=291.80 Aligned_cols=253 Identities=22% Similarity=0.309 Sum_probs=194.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|++++..+.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~------------- 67 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIE------------- 67 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeee-------------
Confidence 589999999999999999999998999999998754321 234678999999999887555433
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+.......++||||+.+++.+.+......+++..++.++.||+.||+|||+.|++||||||+||++
T Consensus 68 --------------~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~ 133 (286)
T cd07847 68 --------------VFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI 133 (286)
T ss_pred --------------EEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE
Confidence 334567889999999555544444345579999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ .++.++|+|||++......... .....++..|+|||++.+ ..++.++|||||||++|||++|..||.+
T Consensus 134 ~---~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~ 203 (286)
T cd07847 134 T---KQGQIKLCDFGFARILTGPGDD-------YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPG 203 (286)
T ss_pred c---CCCcEEECccccceecCCCccc-------ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 4 7789999999999876543211 124467889999999876 4578999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhh-----------------------cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 242 LKAATKKQKYDKICEKK-----------------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
....+............ ...+........+..+.+++..||..+|++||++.++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil 281 (286)
T cd07847 204 KSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELL 281 (286)
T ss_pred CChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHh
Confidence 65433222221111100 00112223345678899999999999999999988764
No 218
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.1e-37 Score=290.74 Aligned_cols=254 Identities=24% Similarity=0.399 Sum_probs=201.8
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+..++|++.++||+|+||.||+|.+. +++.||||.+.... ....+.+|+.+++.++|++++..+
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~-------------- 67 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLY-------------- 67 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeee--------------
Confidence 66789999999999999999999975 45779999887543 345688999999999988755443
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.+.......++|||++ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+||
T Consensus 68 -------------~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~ni 134 (261)
T cd05034 68 -------------AVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNI 134 (261)
T ss_pred -------------eeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheE
Confidence 3344557789999999 88999988753 35689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf 239 (449)
+++ +++.++|+|||++........ .......++..|+|||.+.+..++.++|||||||++|||++ |+.||
T Consensus 135 li~---~~~~~~l~d~g~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~ 205 (261)
T cd05034 135 LVG---ENLVCKIADFGLARLIEDDEY------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPY 205 (261)
T ss_pred EEc---CCCCEEECccccceeccchhh------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCC
Confidence 994 779999999999986653211 11123334678999999998889999999999999999998 99999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
.+.... ..+..+.. ....+.+ ...|.++.+++.+||..+|++||+++++.+.|+.
T Consensus 206 ~~~~~~---~~~~~~~~-~~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 206 PGMTNR---EVLEQVER-GYRMPRP---PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCHH---HHHHHHHc-CCCCCCC---CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 875443 22333222 2222211 3347899999999999999999999999887764
No 219
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.2e-37 Score=293.73 Aligned_cols=248 Identities=26% Similarity=0.440 Sum_probs=191.8
Q ss_pred EEeeeecccCceeEEEEEEc----CCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 10 ~i~~~LG~G~fg~Vy~a~~~----~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++.+.||.|.||.||+|.+. ..+..|+||+++.... ...+.+|++.++.++|++++.+++.+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~----------- 70 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFC----------- 70 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEE-----------
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccc-----------
Confidence 57899999999999999987 3466799999965433 34688999999999999877665544
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
...+..++|+||+ +++|.+++... ...++..++..++.||+.||.|||+++++|+||+++||
T Consensus 71 ----------------~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~ni 134 (259)
T PF07714_consen 71 ----------------IENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNI 134 (259)
T ss_dssp ----------------ESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGE
T ss_pred ----------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3456689999999 78999999876 56799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf 239 (449)
+++ +++.+||+|||++......... ...........|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus 135 ll~---~~~~~Kl~~f~~~~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~ 206 (259)
T PF07714_consen 135 LLD---SNGQVKLSDFGLSRPISEKSKY-----KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPF 206 (259)
T ss_dssp EEE---TTTEEEEESTTTGEETTTSSSE-----EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTT
T ss_pred ccc---cccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 994 7889999999999876322111 11234456788999999999889999999999999999999 78999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
....... ....+... ...+. ...++..+.+++..||..+|++||++.+|.+.|
T Consensus 207 ~~~~~~~---~~~~~~~~-~~~~~---~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 207 SDYDNEE---IIEKLKQG-QRLPI---PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTSCHHH---HHHHHHTT-EETTS---BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccccccc---cccccccc-cccee---ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 8764432 22333222 22221 234588999999999999999999999987754
No 220
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.4e-38 Score=308.12 Aligned_cols=236 Identities=22% Similarity=0.281 Sum_probs=180.5
Q ss_pred ecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 15 LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
||+|+||+||+|++..+++.||||++..... ......|..++..+. ...++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~------------------------~~~~p 56 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL------------------------LDESP 56 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc------------------------cCCCC
Confidence 7999999999999999999999999754211 112333444444332 00123
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
++..+.......+..|+||||+ +++|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||+ +.+
T Consensus 57 ~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~ 132 (330)
T cd05586 57 FIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DAT 132 (330)
T ss_pred cCcceEEEEecCCeEEEEEcCCCCChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCC
Confidence 5556666667778899999999 8899888765 5679999999999999999999999999999999999999 478
Q ss_pred CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCCChhhcH
Q 013125 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK 247 (449)
Q Consensus 169 ~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~ 247 (449)
+.++|+|||++........ .....+||..|+|||++.+. .++.++|||||||++|||++|..||.+....
T Consensus 133 ~~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-- 203 (330)
T cd05586 133 GHIALCDFGLSKANLTDNK-------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-- 203 (330)
T ss_pred CCEEEecCCcCcCCCCCCC-------CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH--
Confidence 8999999999875332211 12356799999999998765 4899999999999999999999999875432
Q ss_pred HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 248 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 248 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
+.+..+.......+. ...+.++.+++..||..+|.+||+.
T Consensus 204 -~~~~~i~~~~~~~~~----~~~~~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 204 -QMYRNIAFGKVRFPK----NVLSDEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred -HHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCCHHHCCCC
Confidence 333344333333332 2347889999999999999999953
No 221
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.5e-37 Score=296.66 Aligned_cols=257 Identities=20% Similarity=0.310 Sum_probs=197.6
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.++||+|+||.||+|.+..+++.||+|.+..... ...+.+|+++++.++|++++..+.
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~-------------- 66 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYG-------------- 66 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEE--------------
Confidence 479999999999999999999999999999998765432 234778999999999887665543
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~Nil 161 (449)
+...++..|+||||+ +++|.+++.. ...++...+..++.|++.||.|||+ .+++||||||+|||
T Consensus 67 -------------~~~~~~~~~lv~ey~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil 132 (308)
T cd06615 67 -------------AFYSDGEISICMEHMDGGSLDQVLKK-AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNIL 132 (308)
T ss_pred -------------EEeeCCEEEEEeeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEE
Confidence 334567899999999 8899999876 3668999999999999999999998 59999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++ .++.++|+|||++....... .....++..|++||++.+..++.++|||||||++|+|++|+.||..
T Consensus 133 ~~---~~~~~~l~dfg~~~~~~~~~---------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 133 VN---SRGEIKLCDFGVSGQLIDSM---------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred Ee---cCCcEEEccCCCcccccccc---------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 94 67889999999986543322 1355788999999999888899999999999999999999999975
Q ss_pred ChhhcHHHHHH-----------------------------HHHHhhcCCCHHHh-hccChHHHHHHHHHHhCCCCCCCCC
Q 013125 242 LKAATKKQKYD-----------------------------KICEKKVSTPIEVL-CKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 242 ~~~~~~~~~~~-----------------------------~i~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
.........+. .+.........+.. ....+.++++++.+||..+|++||+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 280 (308)
T cd06615 201 PDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERAD 280 (308)
T ss_pred cchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcC
Confidence 43221111110 00000000000011 1124678999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 013125 292 YGFLKRLFHDLFSR 305 (449)
Q Consensus 292 ~~~l~~~l~~~~~~ 305 (449)
+.++.+ ..++..
T Consensus 281 ~~~ll~--~~~~~~ 292 (308)
T cd06615 281 LKELTK--HPFIKR 292 (308)
T ss_pred HHHHhc--Chhhhh
Confidence 988754 344443
No 222
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.2e-37 Score=297.63 Aligned_cols=261 Identities=20% Similarity=0.319 Sum_probs=200.2
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcC-------CCceEEEEEecCCCCc---hhHHHHHHHHHHH-cCCCcceeeEeec
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVD-------TNEIVAVKIENSGTKH---PQLLYEAKVYKIL-QGGSKIRLVVFHV 72 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~-------~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l-~~~~~~~~~~~~~ 72 (449)
+-.++|+++++||+|+||.||+|++.. ....||+|++...... ..+..|+++++.+ +|++++..+.
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~--- 85 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLG--- 85 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEE---
Confidence 456799999999999999999998642 3456999987754322 2467899999888 4776555433
Q ss_pred chhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------------CCCCHHHHHHHHH
Q 013125 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLAD 136 (449)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------------~~~~~~~~~~i~~ 136 (449)
++......|+||||+ +++|.+++.... ..+++.+++.++.
T Consensus 86 ------------------------~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 141 (314)
T cd05099 86 ------------------------VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAY 141 (314)
T ss_pred ------------------------EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHH
Confidence 334556789999999 889999886532 3488899999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCC
Q 013125 137 QMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ 216 (449)
Q Consensus 137 qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 216 (449)
||+.||.|||++|++||||||+|||+. .++.+||+|||+++......... ......++..|+|||++.+..+
T Consensus 142 qi~~aL~~lH~~gi~H~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~ 213 (314)
T cd05099 142 QVARGMEYLESRRCIHRDLAARNVLVT---EDNVMKIADFGLARGVHDIDYYK-----KTSNGRLPVKWMAPEALFDRVY 213 (314)
T ss_pred HHHHHHHHHHHCCeeeccccceeEEEc---CCCcEEEcccccccccccccccc-----ccccCCCCccccCHHHHccCCc
Confidence 999999999999999999999999994 67899999999998654322110 0112234567999999999889
Q ss_pred CccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 217 SRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 217 s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
+.++|||||||++|||++ |..||.+.... ..+..+... ... .....++.++.+++..||..+|++||++.++
T Consensus 214 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~-~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l 286 (314)
T cd05099 214 THQSDVWSFGILMWEIFTLGGSPYPGIPVE---ELFKLLREG-HRM---DKPSNCTHELYMLMRECWHAVPTQRPTFKQL 286 (314)
T ss_pred CccchhhHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcC-CCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 999999999999999999 89999775432 222222221 111 1123457899999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 013125 296 KRLFHDLFSRE 306 (449)
Q Consensus 296 ~~~l~~~~~~~ 306 (449)
.+.|.++....
T Consensus 287 l~~l~~~~~~~ 297 (314)
T cd05099 287 VEALDKVLAAV 297 (314)
T ss_pred HHHHHHHHHHh
Confidence 99998886644
No 223
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=6.4e-37 Score=287.82 Aligned_cols=247 Identities=19% Similarity=0.245 Sum_probs=196.7
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.|++++.||.|+||.||+|.+..+++.||+|.+..... ...+.+|+++++.++|++++.....
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~------------- 67 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRES------------- 67 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeee-------------
Confidence 59999999999999999999998899999998764322 2347789999999998875554321
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
+.......|++||++ +++|.+.+... ...+++.+++.++.|++.||+|||++|++||||||+||+
T Consensus 68 -------------~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil 134 (257)
T cd08223 68 -------------WEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVF 134 (257)
T ss_pred -------------ecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEE
Confidence 112345679999999 78998888753 446899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++ ..+.++|+|||++........ ......+++.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 135 ~~---~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 204 (257)
T cd08223 135 LT---RTNIIKVGDLGIARVLENQCD-------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNA 204 (257)
T ss_pred Ee---cCCcEEEecccceEEecccCC-------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 94 788999999999987654322 12355688999999999999999999999999999999999999976
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.... .....+....... .....++++.+++.+||..+|.+||++.++..
T Consensus 205 ~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 205 KDMN---SLVYRIIEGKLPP----MPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred CCHH---HHHHHHHhcCCCC----CccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 4332 2222233322211 22456789999999999999999999887743
No 224
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.7e-37 Score=294.71 Aligned_cols=256 Identities=18% Similarity=0.303 Sum_probs=196.9
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
..++|++.+.||.|+||.||+|.+..+++.||+|++.... ....+..|+.+++.+ +|++++...+......
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~------- 86 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS------- 86 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc-------
Confidence 3578999999999999999999999999999999876542 334577888888888 5776665544322110
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
........|++|||+ +++|.+++... ...++...++.++.||+.||.|||+.||+||||||+||
T Consensus 87 --------------~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~ni 152 (282)
T cd06636 87 --------------PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNV 152 (282)
T ss_pred --------------ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence 002356789999999 67999888753 34588899999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-----CCCCCccchHHHHHHHHHHHHhC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlG~il~el~~G 235 (449)
+++ +++.++|+|||++........ ......|+..|+|||++. +..++.++|||||||++|||++|
T Consensus 153 li~---~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g 222 (282)
T cd06636 153 LLT---ENAEVKLVDFGVSAQLDRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222 (282)
T ss_pred EEC---CCCCEEEeeCcchhhhhcccc-------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhC
Confidence 994 778899999999875543221 123567899999999876 34688899999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..||....... .+..+.. ..+.......++.++.+++.+||..+|.+||++.+|..
T Consensus 223 ~~p~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 223 APPLCDMHPMR---ALFLIPR---NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CCCccccCHHh---hhhhHhh---CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 99997654321 1111111 12222223456889999999999999999999988743
No 225
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.1e-37 Score=295.87 Aligned_cols=248 Identities=23% Similarity=0.341 Sum_probs=197.0
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
..+|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+|+.+++.+.|++++...+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~-------------- 84 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD-------------- 84 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEE--------------
Confidence 479999999999999999999999899999999876543 2345788999999998887555433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+...+...|+||||+ +++|.+++.. ..++..++..++.|++.||.|||+.||+||||||+|||+
T Consensus 85 -------------~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill 149 (296)
T cd06654 85 -------------SYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149 (296)
T ss_pred -------------EEEeCCEEEEeecccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 334567899999999 8899998753 468999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+ .++.++|+|||++......... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 150 ~---~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~ 219 (296)
T cd06654 150 G---MDGSVKLTDFGFCAQITPEQSK-------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219 (296)
T ss_pred c---CCCCEEECccccchhccccccc-------cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 4 7789999999998764332211 12456889999999999888999999999999999999999999865
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
...... . .+.... .+........+..+.+++.+||..+|++||++.+|.+
T Consensus 220 ~~~~~~--~-~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 220 NPLRAL--Y-LIATNG--TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CHHHhH--H-HHhcCC--CCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 432211 1 111111 1111112345788999999999999999999988755
No 226
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.1e-36 Score=288.68 Aligned_cols=257 Identities=22% Similarity=0.336 Sum_probs=202.4
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCC---CceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~---~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
+-..+|.+.+.||.|+||.||+|.+... ...||||....... ...+.+|+.+++.+.|++++..++.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~------ 76 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVI------ 76 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEE------
Confidence 4567899999999999999999987543 34689998765432 23578899999999998876654432
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.....++|||++ +++|.+++......+++..++.++.||+.||+|||+.|++|||||
T Consensus 77 ----------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~ 134 (270)
T cd05056 77 ----------------------TENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIA 134 (270)
T ss_pred ----------------------cCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccC
Confidence 224568999999 889999997656678999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-C
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-G 235 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G 235 (449)
|+||+++ ..+.++|+|||+++........ ......++..|+|||.+.+..++.++|||||||++||+++ |
T Consensus 135 p~nili~---~~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 205 (270)
T cd05056 135 ARNVLVS---SPDCVKLGDFGLSRYLEDESYY------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLG 205 (270)
T ss_pred hheEEEe---cCCCeEEccCceeeecccccce------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcC
Confidence 9999995 6789999999999866543211 1122334567999999988889999999999999999886 9
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 304 (449)
..||.+..... ....+.. ....+ ....+|.++.+++..||..+|++||++.++.+.|.++..
T Consensus 206 ~~pf~~~~~~~---~~~~~~~-~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 206 VKPFQGVKNND---VIGRIEN-GERLP---MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCCCCCCCHHH---HHHHHHc-CCcCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 99998765432 2222211 11111 224568899999999999999999999999999887654
No 227
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=6.6e-37 Score=288.03 Aligned_cols=247 Identities=24% Similarity=0.321 Sum_probs=193.0
Q ss_pred eeecccCceeEEEEEEcCCC---ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTN---EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~---~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
++||+|+||.||+|.+..++ ..||+|++..... ...+.+|+++++.+.|++++..+..
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~---------------- 64 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGV---------------- 64 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEE----------------
Confidence 57999999999999876554 7899998875543 3457889999999998876654432
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
...+..++|||++ +++|.+++.. ...+++..++.++.|++.||+|||++|++||||||+|||++
T Consensus 65 ------------~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~-- 129 (257)
T cd05060 65 ------------CKGEPLMLVMELAPLGPLLKYLKK-RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV-- 129 (257)
T ss_pred ------------EcCCceEEEEEeCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc--
Confidence 1245679999998 8899998875 34789999999999999999999999999999999999994
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKA 244 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~ 244 (449)
.++.+||+|||+++........ +.......++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 130 -~~~~~kl~df~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~ 204 (257)
T cd05060 130 -NRHQAKISDFGMSRALGAGSDY----YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG 204 (257)
T ss_pred -CCCcEEeccccccceeecCCcc----cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH
Confidence 7889999999999866433221 111122234568999999998899999999999999999998 9999987554
Q ss_pred hcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
.. ....+.. ....+ ....++..+.+++..||..+|.+||++.+|.+.|+.+
T Consensus 205 ~~---~~~~~~~-~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 205 AE---VIAMLES-GERLP---RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred HH---HHHHHHc-CCcCC---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 32 2222222 11111 1234578999999999999999999999999988764
No 228
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.2e-37 Score=290.74 Aligned_cols=249 Identities=20% Similarity=0.333 Sum_probs=200.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
++|++.++||+|+||.||+|.+..+++.||+|.+........+.+|+++++.++|++++...
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~------------------ 64 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYY------------------ 64 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeee------------------
Confidence 68999999999999999999998889999999987654456788999999999888755443
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
.+.......|+++|++ +++|.+++......+++..++.++.|++.||.|||+.|++||||+|+||+++
T Consensus 65 ---------~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~-- 133 (256)
T cd06612 65 ---------GSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN-- 133 (256)
T ss_pred ---------eeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC--
Confidence 3334567889999999 7899999877677899999999999999999999999999999999999994
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
.++.++|+|||++........ ......++..|++||++.+..++.++||||||+++|+|++|+.||......
T Consensus 134 -~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~ 205 (256)
T cd06612 134 -EEGQAKLADFGVSGQLTDTMA-------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM 205 (256)
T ss_pred -CCCcEEEcccccchhcccCcc-------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh
Confidence 778999999999986654321 123455788999999999989999999999999999999999999865432
Q ss_pred cHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 246 TKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... ..+.. ...+.......++.++.+++..||..+|++||+++++..
T Consensus 206 ~~~---~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 206 RAI---FMIPN--KPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hhh---hhhcc--CCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 211 11111 111111111234678999999999999999999987754
No 229
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.5e-37 Score=294.63 Aligned_cols=255 Identities=17% Similarity=0.252 Sum_probs=197.6
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++++.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+++++.++|++++.++.
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~-------------- 66 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYG-------------- 66 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhh--------------
Confidence 478999999999999999999998999999998764322 235788999999999887655432
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCc
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC--RRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDN 159 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~--~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~N 159 (449)
++...+..++||||+ +++|..++... ...+++..+..++.||+.||+|||+ .||+||||||+|
T Consensus 67 -------------~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~n 133 (286)
T cd06622 67 -------------AFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTN 133 (286)
T ss_pred -------------heecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHH
Confidence 234567889999999 88898887653 2368999999999999999999997 599999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC------CCCccchHHHHHHHHHHHH
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI------EQSRRDDLESLGYVLLYFL 233 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~~~DvwSlG~il~el~ 233 (449)
|+++ ..+.++|+|||++........ ....++..|+|||++.+. .++.++|||||||++|+|+
T Consensus 134 il~~---~~~~~~l~dfg~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~ 201 (286)
T cd06622 134 VLVN---GNGQVKLCDFGVSGNLVASLA---------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMA 201 (286)
T ss_pred EEEC---CCCCEEEeecCCcccccCCcc---------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHH
Confidence 9994 678999999999876543221 234678899999988544 3588999999999999999
Q ss_pred hCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhc
Q 013125 234 RGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 306 (449)
Q Consensus 234 ~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 306 (449)
+|..||...........+..+.... .......++.++.+++..||..+|++||+++++.+ ..++...
T Consensus 202 ~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~--~~~~~~~ 268 (286)
T cd06622 202 LGRYPYPPETYANIFAQLSAIVDGD----PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE--HPWLVKY 268 (286)
T ss_pred hCCCCCCCcchhhHHHHHHHHhhcC----CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc--Chhhhhc
Confidence 9999997644332222222222211 11222346789999999999999999999988865 3444433
No 230
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=8.1e-37 Score=288.02 Aligned_cols=254 Identities=23% Similarity=0.387 Sum_probs=200.0
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
.+..++|++.++||+|+||.||+|.+. .+..||+|.+..... ...+.+|+++++.++|++++.....
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~----------- 69 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV----------- 69 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEE-----------
Confidence 367899999999999999999999864 455699998765432 3467889999999999886665332
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
... ...+++|||+ +++|.+++... ...+++..++.++.||+.||.|||+.|++||||||+|
T Consensus 70 ----------------~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~n 132 (260)
T cd05073 70 ----------------VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN 132 (260)
T ss_pred ----------------EcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcce
Confidence 222 5679999999 78999998753 4458889999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLP 238 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~p 238 (449)
|+++ ..+.++|+|||++......... ......++..|++||++....++.++|+|||||++|++++ |..|
T Consensus 133 i~i~---~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p 203 (260)
T cd05073 133 ILVS---ASLVCKIADFGLARVIEDNEYT------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 203 (260)
T ss_pred EEEc---CCCcEEECCCcceeeccCCCcc------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCC
Confidence 9994 7889999999999765432211 1123345678999999998889999999999999999998 9999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
|.+...... ...+ ......+ .....+.++.+++.+||..+|.+||++.++.+.|+.
T Consensus 204 ~~~~~~~~~---~~~~-~~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 204 YPGMSNPEV---IRAL-ERGYRMP---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCCCHHHH---HHHH-hCCCCCC---CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 987544322 2222 1122211 124567899999999999999999999999888764
No 231
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.7e-37 Score=289.22 Aligned_cols=245 Identities=22% Similarity=0.300 Sum_probs=196.4
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
-++|++.+.||+|+||.||++.. +++.||+|+.........+.+|+.+++.++|++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-------------- 68 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVI-------------- 68 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEE--------------
Confidence 46899999999999999999864 77889999987655556788999999999998866654321
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
. .+..++||||+ +++|.+++.... ..++...++.++.|++.||.|||+.|++||||||+||+++
T Consensus 69 -------------~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~ 134 (254)
T cd05083 69 -------------L-HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS 134 (254)
T ss_pred -------------c-CCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc
Confidence 2 23468999999 789999987543 3589999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~ 242 (449)
.++.++|+|||++....... .....+..|+|||.+.+..++.++|+|||||++|||++ |+.||...
T Consensus 135 ---~~~~~kl~Dfg~~~~~~~~~----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 201 (254)
T cd05083 135 ---EDGVAKVSDFGLARVGSMGV----------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM 201 (254)
T ss_pred ---CCCcEEECCCccceeccccC----------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC
Confidence 67899999999997643321 12234567999999998889999999999999999997 99999875
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
..... ...+ ....... .....|..+.+++..||..+|.+||++++|...|+
T Consensus 202 ~~~~~---~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 202 SLKEV---KECV-EKGYRME---PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CHHHH---HHHH-hCCCCCC---CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 54322 2222 2222211 12456889999999999999999999999988765
No 232
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=9.8e-37 Score=294.97 Aligned_cols=257 Identities=20% Similarity=0.235 Sum_probs=197.4
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
.++|++.+.||.|+||.||+|.+..+++.||+|++..... .....+|+.+++.++|++++.......
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 76 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVV--------- 76 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEe---------
Confidence 4689999999999999999999999999999998764322 223568999999999998666543321
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
+...+..++|||+++++|.+++......+++.+++.++.||+.||.|||+.|++||||||+||+
T Consensus 77 ----------------~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 140 (309)
T cd07845 77 ----------------GKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLL 140 (309)
T ss_pred ----------------cCCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 1233567999999988999998876677999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
+. ..+.++|+|||++......... .....++..|+|||++.+ ..++.++|||||||++|||++|.+||.
T Consensus 141 ~~---~~~~~kL~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~ 210 (309)
T cd07845 141 LT---DKGCLKIADFGLARTYGLPAKP-------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP 210 (309)
T ss_pred EC---CCCCEEECccceeeecCCccCC-------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCC
Confidence 94 7789999999999876543211 123345788999999876 458999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhh----------------cCC---C---HHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 241 GLKAATKKQKYDKICEKK----------------VST---P---IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~----------------~~~---~---~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
+.........+....... ... + ........++++.+++..||..||.+||+++++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 211 GKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred CCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 765543222222111100 000 0 00111224678899999999999999999887744
No 233
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.3e-37 Score=294.22 Aligned_cols=249 Identities=17% Similarity=0.315 Sum_probs=194.0
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
+-|++.+.||.|+||.||+|.+..++..+++|.+..... ...+.+|+++++.+.|++++....
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~--------------- 69 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD--------------- 69 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEE---------------
Confidence 346889999999999999999999999999998865432 234778999999999887555433
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
++..++..++|+||+ +++|..++......+++..+..++.|++.||+|||+.|++||||||+|||+
T Consensus 70 ------------~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili- 136 (282)
T cd06643 70 ------------AFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF- 136 (282)
T ss_pred ------------EEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE-
Confidence 334567889999999 778877776555679999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-----CCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
+.++.++|+|||++........ ......++..|+|||++. +..++.++|||||||++|||++|.+|
T Consensus 137 --~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p 207 (282)
T cd06643 137 --TLDGDIKLADFGVSAKNTRTIQ-------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPP 207 (282)
T ss_pred --ccCCCEEEcccccccccccccc-------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCC
Confidence 4788999999999876543221 123456889999999874 44578899999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|...... ..+..+.... .+.......++.++.+++..||..+|.+||++.++.+
T Consensus 208 ~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 208 HHELNPM---RVLLKIAKSE--PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ccccCHH---HHHHHHhhcC--CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9865432 2222222211 1111112345789999999999999999999887643
No 234
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=6.9e-37 Score=289.37 Aligned_cols=251 Identities=25% Similarity=0.369 Sum_probs=197.2
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc-----------hhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-----------PQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~-----------~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
+|.+...||.|+||.||+|.+..+++.||+|.+...... ..+.+|+++++.++|++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~--------- 71 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQY--------- 71 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeE---------
Confidence 588999999999999999999888999999987643221 246788999999988865544
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDI 155 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDL 155 (449)
..++...+..++|+||+ +++|.+++.. ...++...+..++.|++.||+|||++|++||||
T Consensus 72 ------------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di 132 (267)
T cd06628 72 ------------------LGSSLDADHLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDI 132 (267)
T ss_pred ------------------EEEEEeCCccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence 33445667889999999 8899988875 456899999999999999999999999999999
Q ss_pred CCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhC
Q 013125 156 KPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 156 kp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G 235 (449)
+|+||++ ++++.++|+|||+++.......... .........|+..|+|||.+.+..++.++|||||||++|+|++|
T Consensus 133 ~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g 208 (267)
T cd06628 133 KGANILV---DNKGGIKISDFGISKKLEANSLSTK-TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG 208 (267)
T ss_pred CHHHEEE---cCCCCEEecccCCCcccccccccCC-ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhC
Confidence 9999999 4788999999999987653221110 01112245688999999999988899999999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..||...... ..+..+.... .+......+..+.+++.+||..+|.+||++.++.+
T Consensus 209 ~~p~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 209 KHPFPDCTQL---QAIFKIGENA----SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCCCCCccHH---HHHHHHhccC----CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 9999875432 2222222211 11222456789999999999999999999887754
No 235
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=9.9e-37 Score=292.25 Aligned_cols=235 Identities=25% Similarity=0.377 Sum_probs=193.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+|+++++.+.|++++..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~-------------- 66 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNL-------------- 66 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccce--------------
Confidence 4799999999999999999999999999999987642 123457789999999988865543
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
..+...++..|+||||+ +++|.+++.. ...++...++.++.||+.||+|||++|++||||+|+||
T Consensus 67 -------------~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~ni 132 (290)
T cd05580 67 -------------YGSFQDDSNLYLVMEYVPGGELFSHLRK-SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENL 132 (290)
T ss_pred -------------eeEEEcCCeEEEEEecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHE
Confidence 33445677899999999 9999998876 46799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
++ +.++.+||+|||++....... ....+++.|++||.+.+..++.++||||||+++|+|++|..||.
T Consensus 133 li---~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 199 (290)
T cd05580 133 LL---DSDGYIKITDFGFAKRVKGRT----------YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFF 199 (290)
T ss_pred EE---CCCCCEEEeeCCCccccCCCC----------CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 99 477899999999987654431 24568899999999988889999999999999999999999997
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP 290 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp 290 (449)
.... ......+.......+ ...+..+++++..||..+|.+|+
T Consensus 200 ~~~~---~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~~p~~R~ 241 (290)
T cd05580 200 DDNP---IQIYEKILEGKVRFP-----SFFSPDAKDLIRNLLQVDLTKRL 241 (290)
T ss_pred CCCH---HHHHHHHhcCCccCC-----ccCCHHHHHHHHHHccCCHHHcc
Confidence 6542 233333333332222 34478999999999999999998
No 236
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.1e-36 Score=289.96 Aligned_cols=251 Identities=21% Similarity=0.278 Sum_probs=192.1
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|++++..
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~---------------- 68 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLL---------------- 68 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEE----------------
Confidence 689999999999999999999998999999998865432 2246789999999998875543
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
..++..++..|+|+||+++++.+.+......+....++.++.|++.||+|||++||+||||||+|||++
T Consensus 69 -----------~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~ 137 (291)
T cd07870 69 -----------HDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS 137 (291)
T ss_pred -----------EEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc
Confidence 334456678899999998888887765455688899999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
.++.++|+|||+++........ .....++..|+|||++.+. .++.++|||||||++|||++|..||.+.
T Consensus 138 ---~~~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 138 ---YLGELKLADFGLARAKSIPSQT-------YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred ---CCCcEEEeccccccccCCCCCC-------CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 7789999999998754332211 1234568899999998764 5788999999999999999999999865
Q ss_pred hhhcHHHHHHHHHHhhc-------------------------CCCHHHhhc--cChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 243 KAATKKQKYDKICEKKV-------------------------STPIEVLCK--SHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~-------------------------~~~~~~~~~--~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
... .+.+..+..... .......+. ..+.++.+++..|+..||.+||+++++
T Consensus 208 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~ 285 (291)
T cd07870 208 SDV--FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDA 285 (291)
T ss_pred hhH--HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHH
Confidence 432 122222111000 000111111 125678899999999999999998776
Q ss_pred H
Q 013125 296 K 296 (449)
Q Consensus 296 ~ 296 (449)
.
T Consensus 286 l 286 (291)
T cd07870 286 L 286 (291)
T ss_pred h
Confidence 3
No 237
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.4e-37 Score=293.14 Aligned_cols=261 Identities=22% Similarity=0.273 Sum_probs=197.4
Q ss_pred CceEEeeeecccCceeEEEEEE----cCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASH----VDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~----~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
.-|+++++||+|+||.||+|+. ..+++.||+|.+..... ...+.+|+++++.++|++++.....+.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------- 76 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICT------- 76 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEe-------
Confidence 3469999999999999999985 35678899998764422 235788999999999988665543321
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
.......++||||+ |++|.+++......+++.+++.++.||+.||+|||++|++||||||+
T Consensus 77 ------------------~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~ 138 (284)
T cd05079 77 ------------------EDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAAR 138 (284)
T ss_pred ------------------cCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchh
Confidence 11235679999999 89999988765556899999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
||+++ .++.++|+|||+++........ +.......++..|+|||++.+..++.++|||||||++|||+++..|
T Consensus 139 Nil~~---~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~ 211 (284)
T cd05079 139 NVLVE---SEHQVKIGDFGLTKAIETDKEY----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDS 211 (284)
T ss_pred eEEEc---CCCCEEECCCccccccccCccc----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCC
Confidence 99994 6788999999999866443221 1112345677789999999988899999999999999999998766
Q ss_pred CCCChh-----------hcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 239 WQGLKA-----------ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 239 f~~~~~-----------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
+..... .................+ ....++..+.+++..||+.+|.+||+++++.+.|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 212 ESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLP---RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CccccchhhhhcccccccccHHHHHHHHHcCccCC---CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 532110 000011111111111111 1234678999999999999999999999999988765
No 238
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.1e-37 Score=295.21 Aligned_cols=250 Identities=19% Similarity=0.320 Sum_probs=197.8
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.++|++.++||.|+||.||+|.+..+++.||+|+...... ...+..|+++++.++|++++...+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-------------- 69 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYE-------------- 69 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEE--------------
Confidence 3689999999999999999999988899999998865422 235778999999999887655544
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
........|+||||+ +++|.+++......+++..++.++.|++.||.|||++||+|+||||+||++
T Consensus 70 -------------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili 136 (280)
T cd06611 70 -------------AYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL 136 (280)
T ss_pred -------------EEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE
Confidence 334567889999999 889999887766789999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-----CCCCCccchHHHHHHHHHHHHhCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+.++.++|+|||++........ ......++..|++||++. ...++.++|||||||++|||++|..
T Consensus 137 ---~~~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~ 206 (280)
T cd06611 137 ---TLDGDVKLADFGVSAKNKSTLQ-------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEP 206 (280)
T ss_pred ---CCCCCEEEccCccchhhccccc-------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCC
Confidence 4788999999999875433221 123456889999999875 3457889999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
||...... ..+..+... ..+.-.....++.++.+++..||..+|.+||++.++.+
T Consensus 207 p~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 207 PHHELNPM---RVLLKILKS--EPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred CcccCCHH---HHHHHHhcC--CCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 99875432 222222211 11111112345789999999999999999999887744
No 239
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.1e-36 Score=291.86 Aligned_cols=251 Identities=22% Similarity=0.268 Sum_probs=192.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+.+|+++++.++|++++..
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~---------------- 68 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTL---------------- 68 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeE----------------
Confidence 689999999999999999999988899999998764322 2346789999999998875543
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
..+....+..|+||||++++|.+++......++...++.++.|++.||+|||+.||+||||||+||++
T Consensus 69 -----------~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~- 136 (291)
T cd07844 69 -----------HDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI- 136 (291)
T ss_pred -----------EEEEecCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE-
Confidence 33445677899999999889999887766678999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+.++.++|+|||+++....... ......++..|+|||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus 137 --~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 137 --SERGELKLADFGLARAKSVPSK-------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred --cCCCCEEECccccccccCCCCc-------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4778999999999875432211 1123346788999999876 45899999999999999999999999765
Q ss_pred hhhcHHHHHHHHHHhhc-------------------------CCCHHHhhccCh--HHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 243 KAATKKQKYDKICEKKV-------------------------STPIEVLCKSHP--AEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~-------------------------~~~~~~~~~~~~--~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
.... +.+..+..... ..+......... .++.+++..|+..+|++||++.++
T Consensus 208 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~ 285 (291)
T cd07844 208 TDVE--DQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEA 285 (291)
T ss_pred ccHH--HHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHH
Confidence 4211 11111111000 001111111223 678899999999999999998876
Q ss_pred H
Q 013125 296 K 296 (449)
Q Consensus 296 ~ 296 (449)
.
T Consensus 286 l 286 (291)
T cd07844 286 M 286 (291)
T ss_pred h
Confidence 4
No 240
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=294.48 Aligned_cols=244 Identities=23% Similarity=0.310 Sum_probs=203.3
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
+|-...|.++..||+|+||.|.+|..+.+.+.+|||+++++ .+.+-...|.++|.....+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kpp-------------- 410 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP-------------- 410 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCc--------------
Confidence 45567899999999999999999999999999999998865 22333566777665544333
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.+..+..++..-+..|+||||+ ||+|-..++. -++|.+..+..++.+|+-||-|||++|||+||||
T Consensus 411 ------------FL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ-~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLK 477 (683)
T KOG0696|consen 411 ------------FLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLK 477 (683)
T ss_pred ------------hHHHHHHHhhhhhheeeEEEEecCchhhhHHHH-hcccCCchhhhhhHHHHHHhhhhhcCCeeeeecc
Confidence 3333444556678899999999 8888877775 5679999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCC
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
.+|||+ +..+++||+|||+++.-.-.... ..+++||+.|+|||++...+|+.++|+||||++||||+.|+
T Consensus 478 LDNvmL---d~eGHiKi~DFGmcKEni~~~~T-------TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQ 547 (683)
T KOG0696|consen 478 LDNVML---DSEGHIKIADFGMCKENIFDGVT-------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 547 (683)
T ss_pred ccceEe---ccCCceEeeecccccccccCCcc-------eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCC
Confidence 999999 68999999999999854333221 35899999999999999999999999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
+||.|... .+.+..|.+.....| +.++.+..++....+...|.+|..
T Consensus 548 pPFdGeDE---~elF~aI~ehnvsyP-----KslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 548 PPFDGEDE---DELFQAIMEHNVSYP-----KSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred CCCCCCCH---HHHHHHHHHccCcCc-----ccccHHHHHHHHHHhhcCCccccC
Confidence 99998654 467777888777776 555789999999999999999974
No 241
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.1e-36 Score=300.25 Aligned_cols=256 Identities=22% Similarity=0.284 Sum_probs=196.0
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+++++.++|++++..+.......
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 88 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK---- 88 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC----
Confidence 45789999999999999999999999999999999876431 1235678999999999998777654321110
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
........|+||||+.++|.+.+.. .++...+..++.||+.||+|||++||+||||||+|
T Consensus 89 -----------------~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~N 148 (353)
T cd07850 89 -----------------SLEEFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 148 (353)
T ss_pred -----------------CccccCcEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence 0122346799999998899887753 28999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
|++ +.++.+||+|||+++....... .....++..|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 149 il~---~~~~~~kL~Dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf 217 (353)
T cd07850 149 IVV---KSDCTLKILDFGLARTAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLF 217 (353)
T ss_pred EEE---CCCCCEEEccCccceeCCCCCC--------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCC
Confidence 999 4778999999999986543221 12446788999999999999999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCC-------------------------HHHh-------------hccChHHHHHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTP-------------------------IEVL-------------CKSHPAEFASYFHYC 281 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~-------------------------~~~~-------------~~~~~~~~~~l~~~~ 281 (449)
....... .+..+.......+ .... ....+..+.+++..|
T Consensus 218 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 294 (353)
T cd07850 218 PGTDHID---QWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKM 294 (353)
T ss_pred CCCCHHH---HHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHH
Confidence 8654322 1222211111100 0000 112355688999999
Q ss_pred hCCCCCCCCCHHHHHH
Q 013125 282 QSLTFDQRPDYGFLKR 297 (449)
Q Consensus 282 l~~~p~~Rp~~~~l~~ 297 (449)
|..||.+||++.++..
T Consensus 295 L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 295 LVIDPEKRISVDDALQ 310 (353)
T ss_pred cCCChhhCcCHHHHhc
Confidence 9999999999888744
No 242
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-36 Score=292.63 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=197.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
.+|++.++||.|+||.||+|.+..+++.||+|.+.... ....+.+|+.+++.++|++++..++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~--------------- 83 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLD--------------- 83 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeee---------------
Confidence 57999999999999999999999999999999876432 2345788999999999887655433
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
+...++..|+|+||+ +++|..++.. ..+++.+++.++.|++.||+|||+.|++||||||+||+++
T Consensus 84 ------------~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~ 149 (296)
T cd06655 84 ------------SFLVGDELFVVMEYLAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG 149 (296)
T ss_pred ------------eEecCceEEEEEEecCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 334567889999999 8899888763 4689999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCCh
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~ 243 (449)
.++.++|+|||++......... .....++..|+|||.+.+..++.++|||||||++|+|++|..||.+..
T Consensus 150 ---~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~ 219 (296)
T cd06655 150 ---MDGSVKLTDFGFCAQITPEQSK-------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (296)
T ss_pred ---CCCCEEEccCccchhccccccc-------CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 7889999999998765433211 124568889999999998889999999999999999999999998754
Q ss_pred hhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..... ..+.... .+........++.+.+++.+||..+|.+||++.+|..
T Consensus 220 ~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 220 PLRAL---YLIATNG--TPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHHH---HHHHhcC--CcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 43221 1121111 1111122446788999999999999999999988754
No 243
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.8e-37 Score=294.21 Aligned_cols=254 Identities=19% Similarity=0.310 Sum_probs=197.4
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+-..+|++.++||+|+||+||+|.+..+++.||+|++..... ...+.+|+++++.++|++++..+.
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~----------- 70 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYG----------- 70 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEee-----------
Confidence 345789999999999999999999998999999998765422 345788999999999887655543
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCC
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPD 158 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~ 158 (449)
+....+..|+||||+ +++|.+++.. .+.+++..+..++.|++.+|.|||+ .|++||||||+
T Consensus 71 ----------------~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~ 133 (284)
T cd06620 71 ----------------AFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPS 133 (284)
T ss_pred ----------------eEecCCEEEEEEecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHH
Confidence 334557889999999 7888888765 4568999999999999999999997 69999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
||++ ++++.++|+|||++........ ....|+..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 134 nil~---~~~~~~~l~d~gl~~~~~~~~~---------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p 201 (284)
T cd06620 134 NILV---NSRGQIKLCDFGVSGELINSIA---------DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFP 201 (284)
T ss_pred HEEE---CCCCcEEEccCCcccchhhhcc---------CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCC
Confidence 9999 4778999999999865433221 245789999999999888999999999999999999999999
Q ss_pred CCCChhhc----HHHHHHHHHHhhcCCCHHHh-hccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAAT----KKQKYDKICEKKVSTPIEVL-CKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~----~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|....... ....+............... ....+.++.+++..||..||++||+++++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~ 265 (284)
T cd06620 202 FAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCA 265 (284)
T ss_pred CcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 98644310 00111111111111111111 1125788999999999999999999988755
No 244
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.5e-36 Score=289.84 Aligned_cols=251 Identities=23% Similarity=0.308 Sum_probs=197.9
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+|+.+++.++|++++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~--------------- 65 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLL--------------- 65 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCccee---------------
Confidence 69999999999999999999998999999998765432 34578899999999888755443
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
.+...+...++|+|+++++|.+++......+++.+++.++.||+.||+|||+.|++|+||||+||++.
T Consensus 66 ------------~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~ 133 (286)
T cd07832 66 ------------DVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS 133 (286)
T ss_pred ------------eEEecCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc
Confidence 33355778899999999999999887667799999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
..+.++|+|||++........ +......++..|+|||++.+.. ++.++|||||||++|||++|.+||.+.
T Consensus 134 ---~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~ 204 (286)
T cd07832 134 ---ADGVLKIADFGLARLFSEEEP------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGE 204 (286)
T ss_pred ---CCCcEEEeeeeecccccCCCC------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCC
Confidence 688999999999986654321 1123456889999999987544 689999999999999999999888765
Q ss_pred hhhcHHHHHHHHHHhhc-------------------------CCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKV-------------------------STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~-------------------------~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..... +..+..... ..+........+..+.+++..||..+|.+||+++++.+
T Consensus 205 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 205 NDIEQ---LAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CHHHH---HHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 43322 222211110 00112233455788999999999999999999887643
No 245
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=7.9e-37 Score=287.25 Aligned_cols=249 Identities=23% Similarity=0.328 Sum_probs=199.1
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+-.+.|++.+.||.|+||.||+|.+ .++.||+|.+..... ..++.+|+.+++.++|++++..++
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~------------- 67 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLG------------- 67 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEE-------------
Confidence 4467899999999999999999987 478899999876544 456889999999999887655433
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+.......++|||++ +++|.+++.... ..+++..++.++.|++.||.|||++|++||||||+||
T Consensus 68 --------------~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Ni 133 (256)
T cd05039 68 --------------VVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNV 133 (256)
T ss_pred --------------EEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceE
Confidence 234467789999999 689999887543 3689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf 239 (449)
+++ .++.++|+|||.++....... ....+..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 134 li~---~~~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~ 200 (256)
T cd05039 134 LVS---EDLVAKVSDFGLAKEASQGQD----------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200 (256)
T ss_pred EEe---CCCCEEEcccccccccccccc----------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCC
Confidence 994 788999999999976632221 2234567999999998889999999999999999997 99999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
....... ....+ ...... ......|+.+.+++..||..+|++||+++++...|+.
T Consensus 201 ~~~~~~~---~~~~~-~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 201 PRIPLKD---VVPHV-EKGYRM---EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCCHHH---HHHHH-hcCCCC---CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 7654322 11111 111111 1123458899999999999999999999999887753
No 246
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.3e-36 Score=292.37 Aligned_cols=253 Identities=21% Similarity=0.270 Sum_probs=195.0
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc-------hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-------PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~-------~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+|++.+.||+|+||.||+|.+..+++.||||.+...... ..+..|+++++.++|++++..+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~------------ 68 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLL------------ 68 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhh------------
Confidence 699999999999999999999989999999988654322 2356789999999888755443
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.+....+..++||||++++|.+++......+++..++.++.||+.||.|||++||+|+||||+||
T Consensus 69 ---------------~~~~~~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~ni 133 (298)
T cd07841 69 ---------------DVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNL 133 (298)
T ss_pred ---------------heeecCCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhE
Confidence 33345678899999999999999875444799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
++. .++.++|+|||++......... .....++..|+|||.+.+ ..++.++|||||||++|||++|.++|
T Consensus 134 ll~---~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~ 203 (298)
T cd07841 134 LIA---SDGVLKLADFGLARSFGSPNRK-------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFL 203 (298)
T ss_pred EEc---CCCCEEEccceeeeeccCCCcc-------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccc
Confidence 994 7889999999999876543211 123356788999998865 45789999999999999999998888
Q ss_pred CCChhhcHHHHHHHHHHh--------------------hcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEK--------------------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~--------------------~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.+................ ....+........+..+.+++..||..+|++||++.++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 204 PGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 765543222221111000 0011112223445678999999999999999999888754
No 247
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=9.5e-37 Score=288.50 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=197.3
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--------CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--------KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
+|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++|++++..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~---------- 70 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLG---------- 70 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhc----------
Confidence 5889999999999999999999999999999886432 1235788999999999987655433
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
+....+..++|+|++ +++|.+++.. ...+++..++.++.||+.||.|||++|++|+||+|+
T Consensus 71 -----------------~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~ 132 (268)
T cd06630 71 -----------------ATCEDSHFNLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGA 132 (268)
T ss_pred -----------------eeccCCeEEEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 334567889999999 8899998875 456899999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
||++. ..+..++|+|||++........... .......++..|+|||.+.+..++.++||||+||++|+|++|..|
T Consensus 133 nil~~--~~~~~~~l~dfg~~~~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p 207 (268)
T cd06630 133 NLLID--STGQRLRIADFGAAARLAAKGTGAG---EFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP 207 (268)
T ss_pred HEEEc--CCCCEEEEcccccccccccccccCC---ccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 99994 2334799999999987654322111 012345688999999999988899999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|..............+...... .......++++.+++..||..+|++||++.++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 208 WNAEKHSNHLALIFKIASATTA---PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCCCCcchHHHHHHHhccCCC---CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 9754433222222222111111 2222345788999999999999999999887743
No 248
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3e-36 Score=283.18 Aligned_cols=246 Identities=24% Similarity=0.302 Sum_probs=199.9
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++++.||.|+||.||.+++..+++.|++|.+.... ....+.+|+++++.++|++++..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~---------------- 64 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAY---------------- 64 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEE----------------
Confidence 6999999999999999999999999999999866432 23357889999999988765544
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
..++.+.+..+++|||+ +++|.+++... ...++...+..++.|++.||.|||+.|++||||+|+||+
T Consensus 65 -----------~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~ 133 (256)
T cd08221 65 -----------YNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIF 133 (256)
T ss_pred -----------EeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEE
Confidence 33445667889999999 88999988754 456899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+. +++.+||+|||++........ ......++..|+|||++.+..++.++|||||||++|||++|..||..
T Consensus 134 ~~---~~~~~kl~d~~~~~~~~~~~~-------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~ 203 (256)
T cd08221 134 LT---KAGLIKLGDFGISKILGSEYS-------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA 203 (256)
T ss_pred Ee---CCCCEEECcCcceEEcccccc-------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCC
Confidence 94 678899999999987654332 12355789999999999988899999999999999999999999976
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... .+....+........ ....+.++.+++..||..+|.+||+++++.+
T Consensus 204 ~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 204 TNP---LNLVVKIVQGNYTPV----VSVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred CCH---HHHHHHHHcCCCCCC----ccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 433 233333333222211 1455789999999999999999999888755
No 249
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.6e-36 Score=289.88 Aligned_cols=256 Identities=20% Similarity=0.294 Sum_probs=196.0
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
..++|++.+.||+|+||.||+|.+..+++.||+|+...... ...+.+|+.+++.+ +|++++..+......
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~-------- 87 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK-------- 87 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec--------
Confidence 45799999999999999999999999999999998765332 34578899999998 588766654432110
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~---~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
-...++..++||||+ +++|.+++.. ....++...+..++.|++.||.|||+.+++||||||+
T Consensus 88 --------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~ 153 (286)
T cd06638 88 --------------DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGN 153 (286)
T ss_pred --------------ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHH
Confidence 013456789999999 8899887753 2356889999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-----CCCCccchHHHHHHHHHHHH
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-----IEQSRRDDLESLGYVLLYFL 233 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DvwSlG~il~el~ 233 (449)
||+++ +.+.++|+|||+++....... ......|+..|+|||++.. ..++.++|||||||++|||+
T Consensus 154 nili~---~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~ 223 (286)
T cd06638 154 NILLT---TEGGVKLVDFGVSAQLTSTRL-------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELG 223 (286)
T ss_pred hEEEC---CCCCEEEccCCceeecccCCC-------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHh
Confidence 99994 678899999999987643221 1234568999999998853 44788999999999999999
Q ss_pred hCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 234 RGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 234 ~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
+|+.||....... .+..+... ..+.......++.++.+++..||..+|++||++.+|.+
T Consensus 224 ~g~~p~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 224 DGDPPLADLHPMR---ALFKIPRN--PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred cCCCCCCCCchhH---HHhhcccc--CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 9999998654321 11111111 11111112234678999999999999999999988755
No 250
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.3e-36 Score=290.20 Aligned_cols=260 Identities=20% Similarity=0.247 Sum_probs=191.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcC-CCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQG-GSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~-~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.+.||+|+||.||+|.+..+++.||||+..... ....+.+|+.+++.+.+ ++++..........
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~------ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEE------ 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecC------
Confidence 47999999999999999999999999999999876432 22457889999999965 56554433221100
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC----RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~----~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
.......|+||||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||
T Consensus 75 ----------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~ 138 (295)
T cd07837 75 ----------------KNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKP 138 (295)
T ss_pred ----------------CCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCh
Confidence 0012237999999987998887643 23589999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~ 236 (449)
+||+++ .+++.++|+|||++..+..... ......+++.|+|||++.+ ..++.++||||||+++|+|++|.
T Consensus 139 ~nil~~--~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 209 (295)
T cd07837 139 QNLLVD--KQKGLLKIADLGLGRAFSIPVK-------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQ 209 (295)
T ss_pred HHEEEe--cCCCeEEEeecccceecCCCcc-------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCC
Confidence 999995 2278999999999976543221 1123356788999998865 45789999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhh--------------------cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKK--------------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~--------------------~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
.||.+.........+....... ............+.++.+++..||..+|.+||+++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil 289 (295)
T cd07837 210 PLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAAL 289 (295)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHh
Confidence 9998755432222111100000 00011122245678899999999999999999988764
Q ss_pred H
Q 013125 297 R 297 (449)
Q Consensus 297 ~ 297 (449)
.
T Consensus 290 ~ 290 (295)
T cd07837 290 T 290 (295)
T ss_pred c
Confidence 3
No 251
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.6e-36 Score=289.78 Aligned_cols=253 Identities=23% Similarity=0.299 Sum_probs=192.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|++.++||+|+||.||+|.+..+++.||+|+...... ...+.+|+++++.++|++++..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~--------------- 65 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNL--------------- 65 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhH---------------
Confidence 579999999999999999999988899999998654322 2346789999999988875443
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
..+...++..|+|+||+ +++|..+.. ....+++..++.++.||+.||.|||+.|++||||+|+||+
T Consensus 66 ------------~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~ 132 (286)
T cd07846 66 ------------IEVFRRKKRLYLVFEFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENIL 132 (286)
T ss_pred ------------HHhcccCCeEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEE
Confidence 23345677899999999 445554443 3456899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
+ ++++.++|+|||++......... .....++..|+|||++.+. .++.++|||||||++|||++|.+||.
T Consensus 133 ~---~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~ 202 (286)
T cd07846 133 V---SQSGVVKLCDFGFARTLAAPGEV-------YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFP 202 (286)
T ss_pred E---CCCCcEEEEeeeeeeeccCCccc-------cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCC
Confidence 9 47889999999999865443211 1245678899999998763 47889999999999999999999997
Q ss_pred CChhhcHHHHHHHHHHh-----------------------hcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 241 GLKAATKKQKYDKICEK-----------------------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~-----------------------~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
+.........+...... ....+......+++..+.+++..||..+|++||++.++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 203 GDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 65432211111111000 0001112233466889999999999999999999987744
No 252
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.1e-36 Score=291.58 Aligned_cols=254 Identities=22% Similarity=0.333 Sum_probs=197.9
Q ss_pred cCCceEEeeeecccCceeEEEEEEc-----CCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
-.++|++.++||.|+||.||+|.+. .++..||+|++..... ...+.+|+++++.+.|++++..++
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~------- 75 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLG------- 75 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEE-------
Confidence 3578999999999999999999874 3577899998875432 235778999999998887655433
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------------------CCCCHHHHHHH
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------------------RKFSLKTVLML 134 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------------------~~~~~~~~~~i 134 (449)
+...+...|+|+|++ +++|.+++.... ..++...++.+
T Consensus 76 --------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 135 (288)
T cd05050 76 --------------------VCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCI 135 (288)
T ss_pred --------------------EEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHH
Confidence 334566789999999 789998886421 24778889999
Q ss_pred HHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC
Q 013125 135 ADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI 214 (449)
Q Consensus 135 ~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 214 (449)
+.||+.||+|||++|++||||||+||++. +++.++|+|||++......... ........+..|+|||++.+.
T Consensus 136 ~~~i~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~ 207 (288)
T cd05050 136 AKQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIADFGLSRNIYSADYY-----KASENDAIPIRWMPPESIFYN 207 (288)
T ss_pred HHHHHHHHHHHHhCCeecccccHhheEec---CCCceEECccccceecccCccc-----cccCCCccChhhcCHHHHhcC
Confidence 99999999999999999999999999994 7889999999998765432211 111233446779999999988
Q ss_pred CCCccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 215 EQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 215 ~~s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
.++.++|||||||++|||++ |..||.+.... +....+...... + .....+.++.+++.+||..+|++||++.
T Consensus 208 ~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~---~~~~~~~~~~~~-~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 280 (288)
T cd05050 208 RYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE---EVIYYVRDGNVL-S---CPDNCPLELYNLMRLCWSKLPSDRPSFA 280 (288)
T ss_pred CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHhcCCCC-C---CCCCCCHHHHHHHHHHcccCcccCCCHH
Confidence 99999999999999999997 88899875443 222222222211 1 1234578999999999999999999999
Q ss_pred HHHHHHH
Q 013125 294 FLKRLFH 300 (449)
Q Consensus 294 ~l~~~l~ 300 (449)
++.+.|+
T Consensus 281 el~~~l~ 287 (288)
T cd05050 281 SINRILQ 287 (288)
T ss_pred HHHHHhh
Confidence 9988775
No 253
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1e-36 Score=290.74 Aligned_cols=248 Identities=21% Similarity=0.372 Sum_probs=188.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHH-HHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKV-YKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~-l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|++.+.||+|+||.||+|.+..+++.||||.++.... ...+..|+.+ ++.+.|+++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~---------------- 64 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVT---------------- 64 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeee----------------
Confidence 479999999999999999999999999999998865432 2234555554 44455665444
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCC
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPD 158 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~-giiHrDLkp~ 158 (449)
+..+....+..|+||||+.++|.+++... ...+++..++.++.||+.||+|||++ +++||||||+
T Consensus 65 -----------~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~ 133 (283)
T cd06617 65 -----------FYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPS 133 (283)
T ss_pred -----------eeEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHH
Confidence 33344556788999999999998887643 34689999999999999999999997 9999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC----CCCCccchHHHHHHHHHHHHh
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG----IEQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~~DvwSlG~il~el~~ 234 (449)
||++ +.++.+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|||++
T Consensus 134 nil~---~~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~ 202 (283)
T cd06617 134 NVLI---NRNGQVKLCDFGISGYLVDSVA--------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELAT 202 (283)
T ss_pred HEEE---CCCCCEEEeecccccccccccc--------cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHh
Confidence 9999 4788999999999876543221 123467889999998865 456889999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|+.||...... .+.+..+.... .. ......++.++.+++..||..+|++||++++|..
T Consensus 203 g~~p~~~~~~~--~~~~~~~~~~~-~~--~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 203 GRFPYDSWKTP--FQQLKQVVEEP-SP--QLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCCCCCccccC--HHHHHHHHhcC-CC--CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 99999753221 12222222211 11 1111235789999999999999999999988755
No 254
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=9.5e-37 Score=289.74 Aligned_cols=246 Identities=21% Similarity=0.320 Sum_probs=198.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|++++....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-------------- 66 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYG-------------- 66 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeE--------------
Confidence 579999999999999999999999999999998875432 235788999999999887655433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+...+...|+|+|++ +++|.+++... .++...++.++.|++.||.|||+++++||||+|+||++
T Consensus 67 -------------~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i 131 (274)
T cd06609 67 -------------SFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL 131 (274)
T ss_pred -------------EEEECCeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence 334567889999999 88999988753 78999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
++++.++|+|||+++........ .....++..|++||.+.+..++.++|||||||++|+|++|..||...
T Consensus 132 ---~~~~~~~l~d~g~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~ 201 (274)
T cd06609 132 ---SEEGDVKLADFGVSGQLTSTMSK-------RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDL 201 (274)
T ss_pred ---CCCCCEEEcccccceeecccccc-------cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 47889999999999877644221 23456888999999999988999999999999999999999999765
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... .....+.... ... ......+.++.+++..||..+|++||+++++.+
T Consensus 202 ~~~---~~~~~~~~~~-~~~--~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 202 HPM---RVLFLIPKNN-PPS--LEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred chH---HHHHHhhhcC-CCC--CcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 432 2222222211 111 111226789999999999999999999888744
No 255
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.4e-36 Score=287.95 Aligned_cols=249 Identities=22% Similarity=0.298 Sum_probs=187.3
Q ss_pred eeecccCceeEEEEEEc--CCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 13 RKIGSGSFGEIFLASHV--DTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~--~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
+.||+|+||.||+|.+. .++..+|+|.+..... ...+.+|+.+++.++|++++..++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~------------------ 62 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG------------------ 62 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEE------------------
Confidence 46899999999999864 3456799998765432 235778999999999988665543
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR----RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~----~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
++......++||||+ +++|.+++.... ..++...++.++.|++.||+|||++|++||||||+||++
T Consensus 63 ---------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~ 133 (269)
T cd05087 63 ---------QCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL 133 (269)
T ss_pred ---------EEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE
Confidence 234456789999999 789999886532 245677888999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-------CCCccchHHHHHHHHHHHHh-
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-------EQSRRDDLESLGYVLLYFLR- 234 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~~~DvwSlG~il~el~~- 234 (449)
. ..+.++|+|||+++....... +.......++..|+|||++.+. .++.++|||||||++|||++
T Consensus 134 ~---~~~~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (269)
T cd05087 134 T---ADLTVKIGDYGLSHNKYKEDY-----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFEL 205 (269)
T ss_pred c---CCCcEEECCccccccccCcce-----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhC
Confidence 4 678999999999865432221 1112345678889999988642 35889999999999999996
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
|..||......... ...+.......+.+......+..+.+++.+|| .+|++||++++|...|
T Consensus 206 g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 206 GSQPYRHLSDEQVL--TYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred CCCCCCCCChHHHH--HHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 99999765443221 11222233333333444456788999999999 6899999999997765
No 256
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.1e-36 Score=285.28 Aligned_cols=253 Identities=20% Similarity=0.278 Sum_probs=192.2
Q ss_pred eeecccCceeEEEEEEcC---CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVD---TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~---~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||.||+|.+.. ....||+|.+..... ...+.+|+.+++.++|++++..++.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------------- 65 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGIC--------------- 65 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEe---------------
Confidence 468999999999998753 345799998754322 23567899999999998866654422
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
...+...++||||+ +++|.+++......++...++.++.|++.||.|||+.+++||||||+|||++
T Consensus 66 -----------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~-- 132 (262)
T cd05058 66 -----------LPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD-- 132 (262)
T ss_pred -----------ecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc--
Confidence 12345578999999 8999999876556678888999999999999999999999999999999994
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChh
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKA 244 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~ 244 (449)
+++.+||+|||+++......... ........++..|+|||.+.+..++.++|||||||++|||++ |.+||.....
T Consensus 133 -~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~ 208 (262)
T cd05058 133 -ESFTVKVADFGLARDIYDKEYYS---VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS 208 (262)
T ss_pred -CCCcEEECCccccccccCCccee---ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 77899999999997654322110 111224456778999999998899999999999999999999 5667766443
Q ss_pred hcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Q 013125 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 304 (449)
Q Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 304 (449)
.. ....+.. ....+.+ ...|..+.+++..||..+|++||++.+|...|++++.
T Consensus 209 ~~---~~~~~~~-~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 209 FD---ITVYLLQ-GRRLLQP---EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred HH---HHHHHhc-CCCCCCC---CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 22 2222221 1111111 3357899999999999999999999999999987753
No 257
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.3e-36 Score=293.31 Aligned_cols=249 Identities=21% Similarity=0.289 Sum_probs=195.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+..|+++++.++|++++.
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~--------------- 65 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPT--------------- 65 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchh---------------
Confidence 479999999999999999999999999999998875432 234778899999888776444
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
+.......+..|+|||++ +++|.+++... ...++...++.++.||+.||+|||+.|++||||||+|
T Consensus 66 ------------~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N 133 (316)
T cd05574 66 ------------LYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPEN 133 (316)
T ss_pred ------------heeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHH
Confidence 344445677899999999 88999988753 3568999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccc----------------------cccCCCCCCCCccccccccccCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI----------------------PYRENKNLTGTARYASCNTHLGIEQS 217 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~----------------------~~~~~~~~~gt~~y~aPE~~~~~~~s 217 (449)
|+++ .++.++|+|||++............ +-.......||..|+|||++.+..++
T Consensus 134 ili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~ 210 (316)
T cd05574 134 ILLH---ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHG 210 (316)
T ss_pred eEEc---CCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCC
Confidence 9994 6789999999998754332111000 00011245789999999999998899
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 218 RRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 218 ~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
.++|||||||++|+|++|..||.+.... ..+..+.......+.. ...+.++.+++..||..+|++||+
T Consensus 211 ~~~Di~slG~ll~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 211 SAVDWWTLGILLYEMLYGTTPFKGSNRD---ETFSNILKKEVTFPGS---PPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred chHHHHHHHHHHHHHhhCCCCCCCCchH---HHHHHHhcCCccCCCc---cccCHHHHHHHHHHccCCHhHCCC
Confidence 9999999999999999999999875443 2333333333222211 125789999999999999999999
No 258
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.8e-36 Score=287.44 Aligned_cols=250 Identities=22% Similarity=0.264 Sum_probs=189.8
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHc-CCCcceeeEeecchhhhhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
|++.++||+|+||.||+|.+..+++.||+|+++.... .....+|+.++..+. |++++...+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~--------------- 65 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIE--------------- 65 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEE---------------
Confidence 7899999999999999999999999999998765322 223457888887775 665444332
Q ss_pred cccCCCcCeeEEecccC--CeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 85 SSTLGGIPNIKWYGVDG--EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~--~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
++.+. +..++||||+.++|.+.+......+++..++.++.||+.||+|||++|++||||||+||++
T Consensus 66 ------------~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l 133 (282)
T cd07831 66 ------------VLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI 133 (282)
T ss_pred ------------EEecCCCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE
Confidence 33333 6789999999889998887655679999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
. . +.+||+|||++........ .....++..|+|||++.. ..++.++|||||||++|||++|..||.+
T Consensus 134 ~---~-~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~ 201 (282)
T cd07831 134 K---D-DILKLADFGSCRGIYSKPP--------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPG 201 (282)
T ss_pred c---C-CCeEEEecccccccccCCC--------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCC
Confidence 4 4 9999999999976543321 123457889999997654 4578899999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHh---------------hcCC------CHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEK---------------KVST------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~---------------~~~~------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
....+.......+... .... .........+.++.+++..||..+|++||+++++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 202 TNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 5443221111111100 0000 011222356789999999999999999999887754
No 259
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=8.8e-37 Score=291.09 Aligned_cols=262 Identities=23% Similarity=0.298 Sum_probs=201.7
Q ss_pred CCceEEeeeecccCceeEEEEEEc----CCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHV----DTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
...|++.++||+|+||.||+|.+. .+++.||+|++..... ...+.+|+++++.+.|++++.....+
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~------- 75 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVC------- 75 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeee-------
Confidence 467899999999999999999864 3478899999876544 34688999999999988765543321
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
........++||||+ +++|.+++......+++..++.++.||+.||+|||++|++||||||
T Consensus 76 ------------------~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p 137 (284)
T cd05038 76 ------------------EKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAA 137 (284)
T ss_pred ------------------ecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 112356789999999 8899999986555799999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+||++. .++.++|+|||++......... +.......++..|++||.+.+..++.++|||||||++|||++|..
T Consensus 138 ~nil~~---~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~ 210 (284)
T cd05038 138 RNILVE---SEDLVKISDFGLAKVLPEDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD 210 (284)
T ss_pred HhEEEc---CCCCEEEcccccccccccCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC
Confidence 999994 6789999999999876532211 111123345567999999998899999999999999999999999
Q ss_pred CCCCChhhc-----------HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 238 PWQGLKAAT-----------KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 238 pf~~~~~~~-----------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
||....... ....+...+......+. ...+|.++.+++.+||..+|.+||++.+|.+.|+.+
T Consensus 211 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 211 PSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPR---PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CcccccchhccccccccccccHHHHHHHHHcCCcCCC---CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 987533211 01112222222222221 234578999999999999999999999999888754
No 260
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.1e-36 Score=283.97 Aligned_cols=246 Identities=21% Similarity=0.280 Sum_probs=197.1
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+|+++++.++|++++...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~--------------- 65 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYY--------------- 65 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhhee---------------
Confidence 6999999999999999999999999999999876532 233578899999999888755433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
......+..++|||++ +++|.+++... ...+++..++.++.|++.+|+|||++|++|+||+|+||+
T Consensus 66 ------------~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil 133 (256)
T cd08220 66 ------------ENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNIL 133 (256)
T ss_pred ------------eeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 2234567889999999 88999998754 345899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+. +++..++|+|||++........ .....++..|+|||.+.+..++.++||||||+++|+|++|..||.+
T Consensus 134 ~~--~~~~~~~l~d~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 203 (256)
T cd08220 134 LD--KHKMVVKIGDFGISKILSSKSK--------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA 203 (256)
T ss_pred Ec--CCCCEEEEccCCCceecCCCcc--------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCccc
Confidence 94 3456789999999987654321 1245688899999999988899999999999999999999999977
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.... .....+...... ......+.++.+++..||..+|.+||++.++.+
T Consensus 204 ~~~~---~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 204 ANLP---ALVLKIMSGTFA----PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CchH---HHHHHHHhcCCC----CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 5432 222222222111 122345789999999999999999999988754
No 261
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.4e-37 Score=293.85 Aligned_cols=248 Identities=22% Similarity=0.332 Sum_probs=196.7
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.++|++.++||+|+||.||+|.+..+++.||+|.+.... ....+.+|+.+++.++|++++..+.
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~-------------- 83 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLD-------------- 83 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEE--------------
Confidence 479999999999999999999999899999999876543 2345778999999998887555433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+...++..|+||||+ +++|.+++.. ..++..++..++.|++.||.|||+.|++||||||+|||+
T Consensus 84 -------------~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili 148 (297)
T cd06656 84 -------------SYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL 148 (297)
T ss_pred -------------EEecCCEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 334567889999999 8899988763 468899999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+ .++.++|+|||++......... .....+++.|++||.+.+..++.++|+|||||++|+|++|..||.+.
T Consensus 149 ~---~~~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~ 218 (297)
T cd06656 149 G---MDGSVKLTDFGFCAQITPEQSK-------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE 218 (297)
T ss_pred C---CCCCEEECcCccceEccCCccC-------cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4 7889999999998765433211 12456888999999999988999999999999999999999999764
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.... ....+... ..+........+..+.+++.+||..+|++||+++++..
T Consensus 219 ~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 219 NPLR---ALYLIATN--GTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred Ccch---heeeeccC--CCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 4321 11111111 11111112345788999999999999999999887754
No 262
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=313.76 Aligned_cols=262 Identities=18% Similarity=0.290 Sum_probs=219.9
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCc---eEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNE---IVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~---~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
|-....+|.+.||.|.||+|++|+.+..++ .||||.++..... ..|+.|+.||-.+.|+|++++.++.
T Consensus 626 Id~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVV------ 699 (996)
T KOG0196|consen 626 IDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVV------ 699 (996)
T ss_pred cChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEE------
Confidence 344567899999999999999999876554 5999999876432 2489999999999999999988765
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
...+..+||+||| .|+|..+++...+.|+..++..+++.|+.||+||-+.|+|||||.
T Consensus 700 ---------------------Tks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLA 758 (996)
T KOG0196|consen 700 ---------------------TKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLA 758 (996)
T ss_pred ---------------------ecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhh
Confidence 4567889999999 999999999888889999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-C
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-G 235 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G 235 (449)
+.|||+ +.+-.+|++|||+++...++.... | ...+-.-+.+|.|||.|...+++.++||||||++|||.+. |
T Consensus 759 ARNILV---NsnLvCKVsDFGLSRvledd~~~~---y-tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyG 831 (996)
T KOG0196|consen 759 ARNILV---NSNLVCKVSDFGLSRVLEDDPEAA---Y-TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 831 (996)
T ss_pred hhheee---ccceEEEeccccceeecccCCCcc---c-cccCCccceeecChhHhhhcccCchhhccccceEEEEecccC
Confidence 999999 588899999999999876554211 1 1112223579999999999999999999999999999886 9
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhc
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 306 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 306 (449)
..||..+++.+....+ +..+..|.+. .+|..+.+||..||+.|-.+||.|.+|...|.+++++.
T Consensus 832 ERPYWdmSNQdVIkaI----e~gyRLPpPm---DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 832 ERPYWDMSNQDVIKAI----EQGYRLPPPM---DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred CCcccccchHHHHHHH----HhccCCCCCC---CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 9999999886544333 4455555444 34999999999999999999999999999999998765
No 263
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=280.94 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=205.7
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCCCCch--hHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP--QLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~--~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
.+.||+|+|+.|--+....++..+||||+.+...+. +.++|++++...++..
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~-------------------------- 136 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHK-------------------------- 136 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCc--------------------------
Confidence 467999999999999999999999999998876544 5899999998887654
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
+|..+..|+.++..+|||||-+ ||+|+..+.. .+.|++.++.++...|+.||.|||.+||.||||||+|||-...+.-
T Consensus 137 nilqLiefFEdd~~FYLVfEKm~GGplLshI~~-~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 137 NILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQK-RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKV 215 (463)
T ss_pred cHHHHHHHhcccceEEEEEecccCchHHHHHHH-hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCc
Confidence 5555566778899999999999 9999998886 6679999999999999999999999999999999999999655555
Q ss_pred CeEEEEeecceeeec--CCCCCccccccCCCCCCCCcccccccccc---CC--CCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 169 NQVYIIDFGLAKKYR--DPTTNRHIPYRENKNLTGTARYASCNTHL---GI--EQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 169 ~~vkL~DfGla~~~~--~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~--~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
.-|||+||.+..-.. .+......| .-.+-+|++.|||||+.. +. .|+.++|+||||+|+|.|+.|.+||.|
T Consensus 216 sPvKiCDfDLgSg~k~~~~~spastP--~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCSPASTP--ELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred CceeeeccccccccccCCCCCCCCCc--cccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 679999998875432 222211111 223568999999999653 32 489999999999999999999999998
Q ss_pred Chhhc------------HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 242 LKAAT------------KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 242 ~~~~~------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
..+.+ ....+..|.++++.+| +.-|..++.+.++++...+..++.+|.++.++
T Consensus 294 ~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFP-dkdWahIS~eakdlisnLlvrda~~rlsa~~v 358 (463)
T KOG0607|consen 294 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFP-DKDWAHISSEAKDLISNLLVRDAKQRLSAAQV 358 (463)
T ss_pred ccCCcCCccCCCccHHHHHHHHHHHhccCCcCC-hhhhHHhhHHHHHHHHHHHhccHHhhhhhhhc
Confidence 65432 4566777888888877 44466778889999999999999888776554
No 264
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=8.9e-37 Score=297.71 Aligned_cols=254 Identities=18% Similarity=0.214 Sum_probs=187.9
Q ss_pred Eeeeeccc--CceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 11 LGRKIGSG--SFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 11 i~~~LG~G--~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
++++||+| +|++||++.+..+++.||+|+++.... ...+.+|+++++.++|++++..+.
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~--------------- 66 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRA--------------- 66 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEE---------------
Confidence 57889999 789999999999999999999875422 224677999999999987665443
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
++...+..|+||||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 67 ------------~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~ 134 (327)
T cd08227 67 ------------TFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI 134 (327)
T ss_pred ------------EEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE
Confidence 335567889999999 88999998753 3458999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC--CCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG--IEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
. .++.++++||+.+.............-.......++..|+|||++.+ ..++.++|||||||++|||++|..||.
T Consensus 135 ~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 211 (327)
T cd08227 135 S---VDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 211 (327)
T ss_pred e---cCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 4 77899999998765433211110000001123356778999999976 458999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcC-------CCH----------------------------------HHhhccChHHHHHHHH
Q 013125 241 GLKAATKKQKYDKICEKKVS-------TPI----------------------------------EVLCKSHPAEFASYFH 279 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~-------~~~----------------------------------~~~~~~~~~~~~~l~~ 279 (449)
....... .......... .+. .......++.+.+++.
T Consensus 212 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 288 (327)
T cd08227 212 DMPATQM---LLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVE 288 (327)
T ss_pred CcchhHH---HHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHH
Confidence 6543211 1111110000 000 0011234568999999
Q ss_pred HHhCCCCCCCCCHHHHHH
Q 013125 280 YCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 280 ~~l~~~p~~Rp~~~~l~~ 297 (449)
.||..||++||++.++.+
T Consensus 289 ~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 289 QCLQRNPDARPSASTLLN 306 (327)
T ss_pred HHHhhCchhcCCHHHHhc
Confidence 999999999999988754
No 265
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.4e-36 Score=297.48 Aligned_cols=260 Identities=20% Similarity=0.227 Sum_probs=198.6
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
++.+|++.+.||+|+||+||+|++..+++.||||.+... .....+.+|+.+++.++|++++.........
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~------ 76 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPP------ 76 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecc------
Confidence 568999999999999999999999999999999987642 1233567899999999999877654322110
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
........|+|+||++++|.+++.. ...++...++.++.||+.||+|||+++++||||||+||
T Consensus 77 ----------------~~~~~~~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Ni 139 (337)
T cd07858 77 ----------------HREAFNDVYIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNL 139 (337)
T ss_pred ----------------cccccCcEEEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHE
Confidence 0012245799999999999888775 45799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
++ +.++.+||+|||+++....... ......++..|+|||++.. ..++.++|||||||++|+|++|+.||
T Consensus 140 l~---~~~~~~kL~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 209 (337)
T cd07858 140 LL---NANCDLKICDFGLARTTSEKGD-------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLF 209 (337)
T ss_pred EE---cCCCCEEECcCccccccCCCcc-------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCC
Confidence 99 4678999999999986543321 1124567889999998875 45899999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHH-----------------------hhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 240 QGLKAATKKQKYDKICE-----------------------KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
.+.........+....+ .....+.......+++++.+++..||..+|.+||+++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell 289 (337)
T cd07858 210 PGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEAL 289 (337)
T ss_pred CCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHH
Confidence 76543221111111100 0001112223345678899999999999999999988875
Q ss_pred H
Q 013125 297 R 297 (449)
Q Consensus 297 ~ 297 (449)
+
T Consensus 290 ~ 290 (337)
T cd07858 290 A 290 (337)
T ss_pred c
Confidence 5
No 266
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=276.57 Aligned_cols=249 Identities=22% Similarity=0.234 Sum_probs=202.4
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----------chhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----------HPQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
.+|.=.+.||.|..+.|-++.+..+++.+|+|++..... .+....|+.||+.+.++.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP------------- 83 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHP------------- 83 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCC-------------
Confidence 567778899999999999999999999999998753311 112467888998876443
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDI 155 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDL 155 (449)
+|-.+..+.......++|+|+| .|-|.|++.. .-.++++..+.|++|+++|++|||.++|+||||
T Consensus 84 -------------~II~l~D~yes~sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDL 149 (411)
T KOG0599|consen 84 -------------YIIDLQDVYESDAFVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDL 149 (411)
T ss_pred -------------cEEEeeeeccCcchhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 2333333445667789999999 8899998875 446899999999999999999999999999999
Q ss_pred CCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC------CCCCccchHHHHHHHH
Q 013125 156 KPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG------IEQSRRDDLESLGYVL 229 (449)
Q Consensus 156 kp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~~DvwSlG~il 229 (449)
||+|||+ +++.+++|+|||+|+....... -..+|||+.|+|||.+.- ..|+..+|+|++|+++
T Consensus 150 KpENILl---ddn~~i~isDFGFa~~l~~Gek--------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVIm 218 (411)
T KOG0599|consen 150 KPENILL---DDNMNIKISDFGFACQLEPGEK--------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIM 218 (411)
T ss_pred Chhheee---ccccceEEeccceeeccCCchh--------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHH
Confidence 9999999 6899999999999987765432 247899999999998862 3589999999999999
Q ss_pred HHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 230 LYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 230 ~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|-|+.|.+||..-. ..-++.-|+++++..-.++ |.+++.+.++|+.+||+.||++|.+.++..+
T Consensus 219 yTLLaGcpPFwHRk---QmlMLR~ImeGkyqF~spe-Wadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 219 YTLLAGCPPFWHRK---QMLMLRMIMEGKYQFRSPE-WADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHcCCCchhHHH---HHHHHHHHHhcccccCCcc-hhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 99999999998633 2344555777777665443 6677889999999999999999999887754
No 267
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-38 Score=308.03 Aligned_cols=252 Identities=21% Similarity=0.272 Sum_probs=207.2
Q ss_pred CCceEEeeeecccCceeEEEEEEcCC-C--ceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDT-N--EIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~-~--~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
.+..++.++||+|+||.||+|.|..- | ..||||.+..+. ..+.|++|+.+|..|+|++.++++++..+
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~------ 182 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD------ 182 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc------
Confidence 35667889999999999999998632 2 359999987653 34579999999999999999998876532
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVY-CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~-~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
....||+|++ .|+|.+.+.+ ....|-......|+.||+.||.||.++++|||||..
T Consensus 183 ----------------------qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAA 240 (1039)
T KOG0199|consen 183 ----------------------QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAA 240 (1039)
T ss_pred ----------------------chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 4567999999 9999998886 345689999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GS 236 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~ 236 (449)
.|+|+. ....|||+||||.+-+...... |.+.....-...|.|||.+.-..++.++|||+|||++|||++ |.
T Consensus 241 RNllla---sprtVKI~DFGLmRaLg~ned~----Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGE 313 (1039)
T KOG0199|consen 241 RNLLLA---SPRTVKICDFGLMRALGENEDM----YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGE 313 (1039)
T ss_pred hhheec---ccceeeeecccceeccCCCCcc----eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCC
Confidence 999995 6889999999999876654321 223334455678999999999999999999999999999998 99
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
.||.|..+....+.++ .+...+.+.. +++++.+++..||..+|.+||+|..|.+.+
T Consensus 314 ePW~G~~g~qIL~~iD----~~erLpRPk~---csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 314 EPWVGCRGIQILKNID----AGERLPRPKY---CSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCCCCCHHHHHHhcc----ccccCCCCCC---ChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 9999988764444433 3444444444 489999999999999999999999987533
No 268
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.6e-36 Score=290.81 Aligned_cols=261 Identities=20% Similarity=0.264 Sum_probs=193.5
Q ss_pred ceEEeeeecccCceeEEEEEEcC--CCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVD--TNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~--~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+|.+.++||+|+||.||+|.+.. +++.||+|++... .......+|+.++..++|++++.....+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 72 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFL-------- 72 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEe--------
Confidence 68999999999999999999987 8899999988762 22445788999999999987665544321
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR----RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~----~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.......|+|||+++++|.+++.... ..++...++.++.||+.||.|||+++|+|||||
T Consensus 73 -----------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlk 135 (316)
T cd07842 73 -----------------EHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLK 135 (316)
T ss_pred -----------------CCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCC
Confidence 11237789999999889988876432 268899999999999999999999999999999
Q ss_pred CCcEEeec-CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHh
Q 013125 157 PDNFLMGL-GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 157 p~Nill~~-~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~ 234 (449)
|+|||++. ++..+.+||+|||++......... ........++..|+|||++.+. .++.++|||||||++|+|++
T Consensus 136 p~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~ 211 (316)
T cd07842 136 PANILVMGEGPERGVVKIGDLGLARLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211 (316)
T ss_pred HHHEEEcCCCCccceEEECCCccccccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 99999952 112789999999999866443221 1123455788999999988764 57999999999999999999
Q ss_pred CCCCCCCChhhc------HHHHHHHHHHhhcCC--------------------------C----HHHh--hccChHHHHH
Q 013125 235 GSLPWQGLKAAT------KKQKYDKICEKKVST--------------------------P----IEVL--CKSHPAEFAS 276 (449)
Q Consensus 235 G~~pf~~~~~~~------~~~~~~~i~~~~~~~--------------------------~----~~~~--~~~~~~~~~~ 276 (449)
|.+||.+..... ....+..++...... + .... ....+.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (316)
T cd07842 212 LEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFD 291 (316)
T ss_pred cCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHH
Confidence 999998654322 111111111111000 0 0000 0134567888
Q ss_pred HHHHHhCCCCCCCCCHHHHHH
Q 013125 277 YFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 277 l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
++..||..||++||++.++..
T Consensus 292 ~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 292 LLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHhcCCcccCcCHHHHhc
Confidence 999999999999999877643
No 269
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.7e-37 Score=314.79 Aligned_cols=201 Identities=19% Similarity=0.250 Sum_probs=153.9
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCC-CceEEEE------------------EecCC-CCchhHHHHHHHHHHHcCCC
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDT-NEIVAVK------------------IENSG-TKHPQLLYEAKVYKILQGGS 63 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~-~~~vAvK------------------v~~~~-~~~~~~~~E~~~l~~l~~~~ 63 (449)
.+.++|+++++||+|+||+||+|..... ++.+++| .+... .....+.+|+++++.++|++
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 3457899999999999999999876432 2122222 11111 11234678999999999887
Q ss_pred cceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHh----cCCCCHHHHHHHHHHHH
Q 013125 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC----RRKFSLKTVLMLADQMI 139 (449)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~----~~~~~~~~~~~i~~qil 139 (449)
++.++ .+....+..|+|+++++++|..++... ........++.++.||+
T Consensus 225 Iv~l~---------------------------~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~ 277 (501)
T PHA03210 225 ILKIE---------------------------EILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLL 277 (501)
T ss_pred cCcEe---------------------------EEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHH
Confidence 55543 344566788999999988888776532 12345677889999999
Q ss_pred HHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCcc
Q 013125 140 ARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRR 219 (449)
Q Consensus 140 ~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~ 219 (449)
.||+|||++|||||||||+|||+ +.++.+||+|||+++.+...... ......||..|+|||++.+..++.+
T Consensus 278 ~aL~yLH~~gIiHrDLKP~NILl---~~~~~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~ 348 (501)
T PHA03210 278 CAVEYIHDKKLIHRDIKLENIFL---NCDGKIVLGDFGTAMPFEKEREA------FDYGWVGTVATNSPEILAGDGYCEI 348 (501)
T ss_pred HHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEEeCCCceecCccccc------ccccccCCcCCCCchhhcCCCCCcH
Confidence 99999999999999999999999 47889999999999876543221 1235679999999999999999999
Q ss_pred chHHHHHHHHHHHHhCCCCCC
Q 013125 220 DDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 220 ~DvwSlG~il~el~~G~~pf~ 240 (449)
+|||||||++|||++|..++.
T Consensus 349 ~DiwSlGvil~ell~~~~~p~ 369 (501)
T PHA03210 349 TDIWSCGLILLDMLSHDFCPI 369 (501)
T ss_pred HHHHHHHHHHHHHHHCCCCCc
Confidence 999999999999999876543
No 270
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.4e-36 Score=289.30 Aligned_cols=246 Identities=22% Similarity=0.307 Sum_probs=197.2
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.+.|+..++||.|+||.||+|.+..++..||+|++..... ...+.+|+++++.+.|++++..
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~--------------- 67 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY--------------- 67 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeE---------------
Confidence 3578899999999999999999988999999998775432 2347789999998888765444
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
..++......|+||||+ +++|.+++.. ..++..++..++.|++.||+|||+.+++|+||+|+||+
T Consensus 68 ------------~~~~~~~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil 133 (277)
T cd06640 68 ------------YGSYLKGTKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVL 133 (277)
T ss_pred ------------EEEEEECCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEE
Confidence 44445677899999999 8899988763 56899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++ +++.++|+|||++........ ......++..|+|||++.+..++.++|+|||||++|||++|..||..
T Consensus 134 ~~---~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06640 134 LS---EQGDVKLADFGVAGQLTDTQI-------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred Ec---CCCCEEEcccccceeccCCcc-------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCC
Confidence 94 778899999999976643321 12345678899999999988899999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
....... ..+ .... .+......+..+.+++..||..+|++||++.++..
T Consensus 204 ~~~~~~~---~~~-~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 204 MHPMRVL---FLI-PKNN---PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred cChHhHh---hhh-hcCC---CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 5543211 111 1111 12233345788999999999999999999998854
No 271
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2e-36 Score=284.51 Aligned_cols=245 Identities=27% Similarity=0.405 Sum_probs=196.8
Q ss_pred eeecccCceeEEEEEEcCC---CceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~---~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||.||+|.+... +..||+|++..... ...+.+|+++++.++|++++..+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~----------------- 63 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLG----------------- 63 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeee-----------------
Confidence 4799999999999999765 88999999876544 346788999999998876554433
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC--------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~--------~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
+.......++||||+ +++|.+++... ...+++..++.++.||+.||+|||++|++||||||
T Consensus 64 ----------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p 133 (262)
T cd00192 64 ----------VCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAA 133 (262)
T ss_pred ----------eecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCc
Confidence 334567889999999 99999998865 46799999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GS 236 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~ 236 (449)
+||+++ .++.++|+|||.+........ +.......++..|+|||.+....++.++|||||||++|||++ |.
T Consensus 134 ~nili~---~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~ 205 (262)
T cd00192 134 RNCLVG---EDLVVKISDFGLSRDVYDDDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGA 205 (262)
T ss_pred ceEEEC---CCCcEEEcccccccccccccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCC
Confidence 999994 779999999999987654332 112335567889999999998889999999999999999999 69
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
.||....... ....+.. ..... .....+.++.+++..||..+|.+||++.++.+.|
T Consensus 206 ~p~~~~~~~~---~~~~~~~-~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 206 TPYPGLSNEE---VLEYLRK-GYRLP---KPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred CCCCCCCHHH---HHHHHHc-CCCCC---CCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 9998864432 2222222 11111 1234478999999999999999999999987765
No 272
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.1e-36 Score=286.59 Aligned_cols=248 Identities=18% Similarity=0.266 Sum_probs=185.9
Q ss_pred eeecccCceeEEEEEEcC--CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 13 RKIGSGSFGEIFLASHVD--TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~--~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
++||+|+||.||+|.... ....+|+|.+..... ...+.+|+++++.++|++++.+++.
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~----------------- 63 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQ----------------- 63 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEE-----------------
Confidence 469999999999997543 345788887654322 2246789999999998876665443
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR----RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~----~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+......|+||||+ +++|.+++.... ..++...++.++.||+.||+|||++||+||||||+|||+
T Consensus 64 ----------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill 133 (269)
T cd05042 64 ----------CIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL 133 (269)
T ss_pred ----------ECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe
Confidence 34567789999999 889999887532 235678889999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-------CCCCCccchHHHHHHHHHHHHh-
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-------GIEQSRRDDLESLGYVLLYFLR- 234 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~~~DvwSlG~il~el~~- 234 (449)
++++.+||+|||++......... .......++..|+|||++. ...++.++|||||||++|||++
T Consensus 134 ---~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (269)
T cd05042 134 ---TADLSVKIGDYGLALEQYPEDYY-----ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTA 205 (269)
T ss_pred ---cCCCcEEEeccccccccccchhe-----eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhC
Confidence 47889999999998653322110 0112345577899999874 3457889999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHH-HHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDK-ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
|..||....... .+.. +.......+.+.....++..+.+++..|| .||++||++++|.+.|
T Consensus 206 ~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 206 ADQPYPDLSDEQ---VLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CCCCCCcCCHHH---HHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 888997654432 2222 22233333444455667889999999999 5999999999988765
No 273
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.5e-36 Score=291.98 Aligned_cols=269 Identities=23% Similarity=0.261 Sum_probs=199.3
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
-++|++.++||+|+||.||+|.+..+++.||||++..... .....+|+++++.++|++++..........
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 80 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERP------ 80 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccc------
Confidence 4799999999999999999999999999999998754322 234678999999999998776544321110
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
...+......++|+||+++++...+......+++..++.++.||+.||+|||++||+||||||+||+
T Consensus 81 -------------~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil 147 (311)
T cd07866 81 -------------DKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANIL 147 (311)
T ss_pred -------------ccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 0001334567999999988888887765667999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccc----cccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHI----PYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~ 236 (449)
+ ++++.++|+|||++............ .........++..|+|||++.+. .++.++|||||||++|||++|+
T Consensus 148 ~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~ 224 (311)
T cd07866 148 I---DNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRR 224 (311)
T ss_pred E---CCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCC
Confidence 9 47889999999999865443221110 00112344678889999988764 4789999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhh----------------------cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKK----------------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 294 (449)
+||.+.......+.+....... .............+.+.+++..||..+|.+||+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~e 304 (311)
T cd07866 225 PILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASD 304 (311)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHH
Confidence 9998765543333222211100 000111112234467889999999999999999877
Q ss_pred HH
Q 013125 295 LK 296 (449)
Q Consensus 295 l~ 296 (449)
+.
T Consensus 305 ll 306 (311)
T cd07866 305 AL 306 (311)
T ss_pred Hh
Confidence 64
No 274
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-37 Score=298.17 Aligned_cols=255 Identities=22% Similarity=0.321 Sum_probs=196.1
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
+.|.-...||+|+||.||+|...+ +..||||.+..... ..+|.+|+.++..++|+|++++++.|
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC------------- 140 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC------------- 140 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE-------------
Confidence 467777899999999999999754 48899998876554 46699999999999999877666554
Q ss_pred cccCCCcCeeEEecccCC-eeEEEEecC-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCCC
Q 013125 85 SSTLGGIPNIKWYGVDGE-DNVLVLDLL-GPSLEDLFVYCRR-KFSLKTVLMLADQMIARIEYVHSRG---FLHRDIKPD 158 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~-~~~lv~e~~-g~sL~~~~~~~~~-~~~~~~~~~i~~qil~~L~~LH~~g---iiHrDLkp~ 158 (449)
.+.+ +.+||+||+ .|+|.+.+..... .++|...++|+.+++.||+|||+.. |||||||++
T Consensus 141 --------------~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKss 206 (361)
T KOG1187|consen 141 --------------LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSS 206 (361)
T ss_pred --------------ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHH
Confidence 4555 599999999 8899999886555 8899999999999999999999943 999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecC-CCCCccccccCCCCC-CCCccccccccccCCCCCccchHHHHHHHHHHHHhCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRD-PTTNRHIPYRENKNL-TGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~-~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
|||+ |++...||+|||+|+.... .... ... .||..|++||.+.....+.++||||||++|.||++|+
T Consensus 207 NILL---D~~~~aKlsDFGLa~~~~~~~~~~--------~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr 275 (361)
T KOG1187|consen 207 NILL---DEDFNAKLSDFGLAKLGPEGDTSV--------STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGR 275 (361)
T ss_pred HeeE---CCCCCEEccCccCcccCCccccce--------eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCC
Confidence 9999 6899999999999965543 2211 122 7999999999999888999999999999999999999
Q ss_pred CCCCCChhhcH---HHH---------HHHHHHhhcC-CCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 237 LPWQGLKAATK---KQK---------YDKICEKKVS-TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 237 ~pf~~~~~~~~---~~~---------~~~i~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
.+.....+... ... +..+++..+. ..... ...-..+..+...|++.+|.+||++.++.+.|+.+
T Consensus 276 ~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~--~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 276 KAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPD--EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred cccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCCh--HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 88775331111 111 1111111111 00000 00123477788899999999999999987777544
No 275
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.9e-36 Score=296.23 Aligned_cols=263 Identities=20% Similarity=0.273 Sum_probs=200.5
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
++++|++.+.||.|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.++|++++......
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------- 73 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDIL--------- 73 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhc---------
Confidence 4689999999999999999999999999999999876532 233567899999999998866542211
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
..........|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus 74 --------------~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Ni 138 (334)
T cd07855 74 --------------RPPGADFKDVYVVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNL 138 (334)
T ss_pred --------------cccCCCCceEEEEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHE
Confidence 111134567899999998899888764 45699999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+++ +++.+||+|||++.......... . .......++..|++||.+.+ ..++.++|||||||++|||++|+.||
T Consensus 139 l~~---~~~~~kl~dfg~~~~~~~~~~~~-~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf 212 (334)
T cd07855 139 LVN---EDCELRIGDFGMARGLSSSPTEH-K--YFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLF 212 (334)
T ss_pred EEc---CCCcEEecccccceeecccCcCC-C--cccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCcc
Confidence 994 78899999999998764432211 0 01124578899999999876 45899999999999999999999999
Q ss_pred CCChhhcHHHHHHHH-----------------------HHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 240 QGLKAATKKQKYDKI-----------------------CEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i-----------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
.+.........+... .......+...+....+.++.+++..||+.+|.+||++.++.
T Consensus 213 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 292 (334)
T cd07855 213 PGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL 292 (334)
T ss_pred CCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 775432211111110 011112223334456688999999999999999999988774
Q ss_pred H
Q 013125 297 R 297 (449)
Q Consensus 297 ~ 297 (449)
.
T Consensus 293 ~ 293 (334)
T cd07855 293 Q 293 (334)
T ss_pred h
Confidence 4
No 276
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.3e-36 Score=286.78 Aligned_cols=254 Identities=21% Similarity=0.277 Sum_probs=195.6
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|+..++||.|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|++++..++.+.
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----------- 69 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFL----------- 69 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEE-----------
Confidence 579999999999999999999999999999998875432 335789999999999988666544321
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~---~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
....+..|+||||+ +++|.+++.. ....++...+..++.||+.||.|||+.|++|+||+|+|
T Consensus 70 --------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~n 135 (287)
T cd06621 70 --------------DESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSN 135 (287)
T ss_pred --------------ccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence 12345689999999 8899887653 24568999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
|++. .++.++|+|||++........ ....++..|++||.+.+..++.++|||||||++|+|++|..||
T Consensus 136 il~~---~~~~~~l~dfg~~~~~~~~~~---------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~ 203 (287)
T cd06621 136 ILLT---RKGQVKLCDFGVSGELVNSLA---------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPF 203 (287)
T ss_pred EEEe---cCCeEEEeecccccccccccc---------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 9994 678899999999865443221 2345788999999999989999999999999999999999999
Q ss_pred CCChh--hcHHHHHHHHHHhhcCCCHHHhh--ccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 240 QGLKA--ATKKQKYDKICEKKVSTPIEVLC--KSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 240 ~~~~~--~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..... ....+....+............. ...++.+.+++..||..+|.+||++.++.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 204 PPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 86522 11122222222111110000000 123578999999999999999999987755
No 277
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4e-36 Score=290.32 Aligned_cols=263 Identities=24% Similarity=0.284 Sum_probs=198.1
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|++.++||+|+||.||+|.+..+++.||||++..... .....+|+++++.++|++++.....+.....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~------ 85 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAT------ 85 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccc------
Confidence 579999999999999999999999999999998754322 2235689999999999998877665432210
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
.+.......++||||++++|.+++......+++.+++.++.||+.||+|||++|++|+||||+||++
T Consensus 86 -------------~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~ 152 (310)
T cd07865 86 -------------PYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI 152 (310)
T ss_pred -------------cccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence 0122345679999999989998887655579999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+..+.+||+|||++..+........ .......++..|+|||.+.+.. ++.++||||||+++|||++|..||.+
T Consensus 153 ---~~~~~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~ 226 (310)
T cd07865 153 ---TKDGILKLADFGLARAFSLSKNSKP---NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQG 226 (310)
T ss_pred ---CCCCcEEECcCCCcccccCCcccCC---CCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 4788999999999987654322110 1113456788999999887654 78899999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHH--------------------------Hh-hccChHHHHHHHHHHhCCCCCCCCCHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIE--------------------------VL-CKSHPAEFASYFHYCQSLTFDQRPDYGF 294 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~--------------------------~~-~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 294 (449)
.........+..+.. ..+.. .+ .......+.+++..||..||.+||++++
T Consensus 227 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e 303 (310)
T cd07865 227 NTEQHQLTLISQLCG---SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADT 303 (310)
T ss_pred CCHHHHHHHHHHHhC---CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHH
Confidence 654333332222221 11100 00 0012356778999999999999999887
Q ss_pred HHH
Q 013125 295 LKR 297 (449)
Q Consensus 295 l~~ 297 (449)
+.+
T Consensus 304 ~l~ 306 (310)
T cd07865 304 ALN 306 (310)
T ss_pred Hhc
Confidence 643
No 278
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.8e-38 Score=306.79 Aligned_cols=250 Identities=22% Similarity=0.325 Sum_probs=205.3
Q ss_pred EEeeeecccCceeEEEEEEcCCCceEEEEEec------CCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN------SGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 10 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+....||+|+|-+||+|.|..+|..||.-.++ .....+++..|+.+|+.|+|+|+++++....
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~----------- 111 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWV----------- 111 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeehee-----------
Confidence 56788999999999999999999988864322 2223457899999999999999988865443
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCcE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRG--FLHRDIKPDNF 160 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~g--iiHrDLkp~Ni 160 (449)
........+|+|++ .|+|..+++. .++.+.+.++.|++||+.||.|||++. |||||||.+||
T Consensus 112 --------------d~~n~~in~iTEL~TSGtLr~Y~kk-~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNI 176 (632)
T KOG0584|consen 112 --------------DTDNKTINFITELFTSGTLREYRKK-HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNI 176 (632)
T ss_pred --------------cCCCceeeeeeecccCCcHHHHHHH-hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceE
Confidence 23446678999999 9999999886 567899999999999999999999985 99999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
+|. ...|.|||+|+|||...+.... +.+.|||.|||||++. ..|++.+||||||+++.||+|+..||.
T Consensus 177 Fin--G~~G~VKIGDLGLAtl~r~s~a---------ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs 244 (632)
T KOG0584|consen 177 FVN--GNLGEVKIGDLGLATLLRKSHA---------KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS 244 (632)
T ss_pred EEc--CCcCceeecchhHHHHhhcccc---------ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh
Confidence 996 5779999999999998876654 4679999999999998 689999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
.... ..+.|.++..+..+ ..+.+-..++++++|..|+.. .++||++.+|+. ..+|..
T Consensus 245 EC~n--~AQIYKKV~SGiKP---~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~--d~Ff~~ 301 (632)
T KOG0584|consen 245 ECTN--PAQIYKKVTSGIKP---AALSKVKDPEVREFIEKCLAT-KSERLSAKELLK--DPFFDE 301 (632)
T ss_pred hhCC--HHHHHHHHHcCCCH---HHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh--Chhhcc
Confidence 6543 35677777665433 333344478999999999998 999999877633 444444
No 279
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.6e-36 Score=290.52 Aligned_cols=258 Identities=20% Similarity=0.287 Sum_probs=198.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+++++.++|++++.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~--------------- 65 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVS--------------- 65 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeee---------------
Confidence 479999999999999999999999999999998765421 234668888998888876444
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+...+...++.|+||||+ |++|.+++.. ...+++..+..++.|++.||.|||+.|++||||||+||
T Consensus 66 ------------~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NI 132 (305)
T cd05609 66 ------------MFCSFETKRHLCMVMEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNL 132 (305)
T ss_pred ------------eEEEEecCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHE
Confidence 334445677889999999 8899998875 45689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCcc--------ccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHH
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRH--------IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYF 232 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~--------~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el 232 (449)
+++ ..+.++|+|||+++.......... ..........++..|+|||.+.+..++.++|+|||||++|||
T Consensus 133 ll~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el 209 (305)
T cd05609 133 LIT---SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEF 209 (305)
T ss_pred EEC---CCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHH
Confidence 994 788999999999874321111100 000011234678899999999988899999999999999999
Q ss_pred HhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 233 LRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 233 ~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
++|..||.+.... +.+..+.......+.. ....+.++.+++.+||..+|++||+...+.+++.
T Consensus 210 ~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 210 LVGCVPFFGDTPE---ELFGQVISDDIEWPEG--DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HhCCCCCCCCCHH---HHHHHHHhcccCCCCc--cccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 9999999865432 2333333322222221 1246889999999999999999999765555544
No 280
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3e-36 Score=291.31 Aligned_cols=247 Identities=21% Similarity=0.300 Sum_probs=196.4
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
....+|++.++||+|+||+||+|.+..+++.||+|++..... ...+.+|+++++.++|++++...+.
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~-------- 83 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGC-------- 83 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEE--------
Confidence 345789999999999999999999988999999998764322 1347789999999999876655443
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
+...+..|+|+||+.+++.+++......+++..+..++.||+.||.|||+.||+||||+|+
T Consensus 84 -------------------~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~ 144 (307)
T cd06607 84 -------------------YLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAG 144 (307)
T ss_pred -------------------EEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcc
Confidence 3455678999999988998888766677999999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc---CCCCCccchHHHHHHHHHHHHhC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlG~il~el~~G 235 (449)
||++ ++++.++|+|||++...... ....++..|+|||++. ...++.++||||||+++|||++|
T Consensus 145 nIl~---~~~~~~kL~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg 210 (307)
T cd06607 145 NILL---TEPGTVKLADFGSASLVSPA-----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 210 (307)
T ss_pred cEEE---CCCCCEEEeecCcceecCCC-----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcC
Confidence 9999 47889999999998754322 2456788999999875 34588899999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..||.+..... ....+.... +.......++..+.+++..||..+|++||++.+|..
T Consensus 211 ~~p~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 211 KPPLFNMNAMS---ALYHIAQND---SPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CCCCCCccHHH---HHHHHhcCC---CCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 99998754322 111121111 111111235778999999999999999999888854
No 281
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.4e-36 Score=287.76 Aligned_cols=255 Identities=18% Similarity=0.304 Sum_probs=194.5
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.++|.+.+.||+|+||.||+|.+..+++.||+|++..... ...+..|+.+++.+ +|++++..+.......
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~-------- 92 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD-------- 92 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc--------
Confidence 4789999999999999999999999999999998865432 34577899999888 6777666544321110
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~---~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
.......|+||||+ +++|.+++.. ....+++..++.++.|++.||+|||++|++||||||+|
T Consensus 93 --------------~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~n 158 (291)
T cd06639 93 --------------KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNN 158 (291)
T ss_pred --------------ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence 01235689999999 8899988763 34578999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-----CCCccchHHHHHHHHHHHHh
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-----EQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~~DvwSlG~il~el~~ 234 (449)
|++. +++.++|+|||++......... .....|+..|+|||++... .++.++|||||||++|||++
T Consensus 159 ili~---~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~ 228 (291)
T cd06639 159 ILLT---TEGGVKLVDFGVSAQLTSTRLR-------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGD 228 (291)
T ss_pred EEEc---CCCCEEEeecccchhccccccc-------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhh
Confidence 9994 6788999999998765432211 1244688999999987643 36889999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|+.||...... ..+..+...... .. ......+..+.+++..||..+|++||++.+|.+
T Consensus 229 g~~p~~~~~~~---~~~~~~~~~~~~-~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 229 GDPPLFDMHPV---KTLFKIPRNPPP-TL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred CCCCCCCCcHH---HHHHHHhcCCCC-CC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 99999875432 222222211110 00 011234578999999999999999999888754
No 282
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5e-36 Score=286.12 Aligned_cols=253 Identities=22% Similarity=0.281 Sum_probs=194.2
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
+|++.++||.|+||.||+|++..+++.||||++.... ....+.+|+.+++.++|++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~----------------- 63 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRL----------------- 63 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeee-----------------
Confidence 5899999999999999999999999999999876542 23457789999999998865443
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR--RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~--~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
..++...+..++||||+.++|.+++.... ..+++..++.++.||+.||.|||++|++||||||+||++
T Consensus 64 ----------~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~ 133 (284)
T cd07836 64 ----------HDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI 133 (284)
T ss_pred ----------eeeEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE
Confidence 33445667889999999889988887543 458999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++++.++|+|||++........ ......++..|++||++.+. .++.++|||||||++|+|++|+.||.+
T Consensus 134 ---~~~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 203 (284)
T cd07836 134 ---NKRGELKLADFGLARAFGIPVN-------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPG 203 (284)
T ss_pred ---CCCCcEEEeecchhhhhcCCcc-------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 4778999999999975433211 12234568899999988664 578999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcC---------------------CCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVS---------------------TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~---------------------~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
................... .....+....+..+.+++..||+.+|.+||++.++.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 204 TNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 5443222211111000000 0011112234678899999999999999999887743
No 283
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.5e-36 Score=287.65 Aligned_cols=255 Identities=21% Similarity=0.290 Sum_probs=196.3
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|++.++||+|+||.||+|.+..+++.||+|+++... ....+.+|+++++.++|++++..+.
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~------------- 67 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKE------------- 67 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhh-------------
Confidence 58999999999999999999999999999999876432 2346789999999999887554432
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
++...+..++||||+++++.+.+......++...+..++.||+.||.|||+.|++||||+|+||++
T Consensus 68 --------------~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~ 133 (288)
T cd07833 68 --------------AFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV 133 (288)
T ss_pred --------------eEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE
Confidence 234567899999999767766665555679999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++++.++|+|||++......... ......++..|+|||++.+. .++.++||||||+++|+|++|.+||.+
T Consensus 134 ---~~~~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 204 (288)
T cd07833 134 ---SESGVLKLCDFGFARALRARPAS------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPG 204 (288)
T ss_pred ---CCCCCEEEEeeecccccCCCccc------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 47899999999998776544321 11345678899999999888 789999999999999999999999986
Q ss_pred ChhhcHHHHHHHHHHhh------------------cCC---C--HHH-hhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKK------------------VST---P--IEV-LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~------------------~~~---~--~~~-~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
....+.......+.... ... + ... .....+.++.+++..||..+|++||+++++..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 205 DSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 54432221111111000 000 0 000 11223788999999999999999999887643
No 284
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=9e-36 Score=286.06 Aligned_cols=252 Identities=22% Similarity=0.260 Sum_probs=193.4
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|++.++||.|+||+||+|.+..+++.||+|++..... ...+.+|+++++.++|++++..
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~--------------- 66 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL--------------- 66 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeE---------------
Confidence 579999999999999999999998999999998754322 2357789999999998875544
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
..+.......|+||||++++|.+.+.... ..++...+..++.||+.||+|||++|++||||+|+||+
T Consensus 67 ------------~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nil 134 (294)
T PLN00009 67 ------------QDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLL 134 (294)
T ss_pred ------------EEEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEE
Confidence 33445667899999999888888876533 23688899999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
+. ..++.+||+|||++........ ......++..|++||++.+. .++.++|||||||++|+|++|.+||.
T Consensus 135 l~--~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~ 205 (294)
T PLN00009 135 ID--RRTNALKLADFGLARAFGIPVR-------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFP 205 (294)
T ss_pred EE--CCCCEEEEcccccccccCCCcc-------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 95 2456799999999975433211 11234568899999988764 57899999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcC------------------------CCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 241 GLKAATKKQKYDKICEKKVS------------------------TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~------------------------~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
...... .+.++...... ..........++++.+++..|+..+|++||++.++.
T Consensus 206 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l 282 (294)
T PLN00009 206 GDSEID---ELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAAL 282 (294)
T ss_pred CCCHHH---HHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHh
Confidence 754322 12121111000 001112234578899999999999999999988875
Q ss_pred H
Q 013125 297 R 297 (449)
Q Consensus 297 ~ 297 (449)
+
T Consensus 283 ~ 283 (294)
T PLN00009 283 E 283 (294)
T ss_pred c
Confidence 4
No 285
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.2e-36 Score=291.20 Aligned_cols=251 Identities=20% Similarity=0.292 Sum_probs=191.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHc-CCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.+|+..+.||+|+||.||++.+..+++.||+|.+..... ...+.+|+.++..+. |++++..
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~--------------- 68 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKF--------------- 68 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeee---------------
Confidence 467788999999999999999999999999998764322 234678888888886 6665443
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCC
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY----CRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKP 157 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~----~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp 157 (449)
+.+.......+++||+++.++.++... ....++...+..++.|++.||+|||+ .|++||||||
T Consensus 69 ------------~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp 136 (288)
T cd06616 69 ------------YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKP 136 (288)
T ss_pred ------------eeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCH
Confidence 333445677899999998888776542 23569999999999999999999997 5999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC---CCCccchHHHHHHHHHHHHh
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI---EQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~~DvwSlG~il~el~~ 234 (449)
+||+++ ..+.++|+|||++........ .....|+..|+|||++.+. .++.++|||||||++|||++
T Consensus 137 ~Nil~~---~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~ 205 (288)
T cd06616 137 SNILLD---RNGNIKLCDFGISGQLVDSIA--------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVAT 205 (288)
T ss_pred HHEEEc---cCCcEEEeecchhHHhccCCc--------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHh
Confidence 999994 678999999999976543321 1234678899999998876 68999999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|+.||..... ..+.+..+...............++.++.+|+..||..+|++||++++|..
T Consensus 206 g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 206 GKFPYPKWNS--VFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CCCCchhcch--HHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9999976431 112222222111111111122346789999999999999999999998855
No 286
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.1e-36 Score=284.19 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=192.1
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-------chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-------HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
..|++.+.||+|+||.||+|.+..++..||+|++..... ...+.+|+.+++.++|++++.......
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------- 74 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLR------- 74 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEE-------
Confidence 468999999999999999999999999999998754321 124678999999999988665443211
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
.......++++|++ +++|.+.+.. ...++...++.++.||+.||+|||+++|+||||||+
T Consensus 75 ------------------~~~~~~~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~ 135 (266)
T cd06651 75 ------------------DRAEKTLTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGA 135 (266)
T ss_pred ------------------cCCCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHH
Confidence 12346778999999 7899988875 456899999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
||++ +.++.++|+|||++.......... .......++..|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 136 nil~---~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~p 208 (266)
T cd06651 136 NILR---DSAGNVKLGDFGASKRLQTICMSG----TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPP 208 (266)
T ss_pred HEEE---CCCCCEEEccCCCccccccccccC----CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCC
Confidence 9999 477889999999997654322110 011234678899999999998899999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|...... .....+..... .+......++.+++++ .||..+|++||++++|.+
T Consensus 209 f~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 209 WAEYEAM---AAIFKIATQPT---NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ccccchH---HHHHHHhcCCC---CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 9865322 22222211111 1122233467888888 688889999999988744
No 287
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.8e-36 Score=280.79 Aligned_cols=243 Identities=21% Similarity=0.336 Sum_probs=189.6
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
+.||+|+||.||+|... ++..||+|++..... ...+.+|+++++.++|++++....
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-------------------- 59 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIG-------------------- 59 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEE--------------------
Confidence 47899999999999864 678899998775432 224778999999998887555433
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
++...+..++||||+ +++|.+++......+++..++.++.|++.+|.|||++|++||||||+||+++ ++
T Consensus 60 -------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~ 129 (250)
T cd05085 60 -------VCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---EN 129 (250)
T ss_pred -------EEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CC
Confidence 334556789999999 8999988876556689999999999999999999999999999999999994 78
Q ss_pred CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChhhcH
Q 013125 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATK 247 (449)
Q Consensus 169 ~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~ 247 (449)
+.++|+|||++......... ......++..|+|||++.+..++.++||||||+++|++++ |..||.+......
T Consensus 130 ~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~ 203 (250)
T cd05085 130 NVLKISDFGMSRQEDDGIYS------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA 203 (250)
T ss_pred CeEEECCCccceeccccccc------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH
Confidence 89999999998754332211 1122344567999999998889999999999999999998 9999987644322
Q ss_pred HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 248 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 248 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
. ..+ ...... ......+..+.+++.+||..+|++||++.++.+.|
T Consensus 204 ~---~~~-~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 204 R---EQV-EKGYRM---SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred H---HHH-HcCCCC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 1 122 111111 11234578999999999999999999999987765
No 288
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.8e-36 Score=283.41 Aligned_cols=252 Identities=19% Similarity=0.284 Sum_probs=195.0
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--------chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--------HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
+|++.+.||.|+||+||+|.+ .+++.||+|++..... ...+.+|+++++.++|++++...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~----------- 68 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYL----------- 68 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEe-----------
Confidence 588999999999999999987 4788999998764321 12467899999999887655443
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
.++...+..++|+||+ +++|.+++.. ...++...+..++.|++.||+|||+.||+|+||+|+
T Consensus 69 ----------------~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~ 131 (265)
T cd06631 69 ----------------GTCLDDNTISIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGN 131 (265)
T ss_pred ----------------eEeecCCeEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHH
Confidence 3345568899999999 8899998865 456899999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
||++ ++.+.++|+|||++........... .........++..|++||++.+..++.++|||||||++|+|++|..|
T Consensus 132 nil~---~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p 207 (265)
T cd06631 132 NVML---MPNGIIKLIDFGCARRLAWVGLHGT-HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPP 207 (265)
T ss_pred hEEE---CCCCeEEeccchhhHhhhhcccccc-ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCc
Confidence 9999 4788999999999876532211100 00112345689999999999998899999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|....... ....+... ....+......+.++.+++..||..+|.+||++.++..
T Consensus 208 ~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 208 LASMDRLA---AMFYIGAH--RGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred cccCChHH---HHHHhhhc--cCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 98654322 11111111 11222234556889999999999999999999887743
No 289
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=6.9e-36 Score=282.43 Aligned_cols=251 Identities=23% Similarity=0.316 Sum_probs=192.0
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-------chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-------HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
.+|++.+.||+|+||.||+|.+..+++.||||.+..... ...+.+|+++++.+.|++++...+...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------- 74 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLR------- 74 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEec-------
Confidence 579999999999999999999999999999998753211 124677999999999887665443211
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
.......++||||+ +++|.+++.. ...++...++.++.|++.||+|||++|++|+||||+
T Consensus 75 ------------------~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~ 135 (265)
T cd06652 75 ------------------DPMERTLSIFMEHMPGGSIKDQLKS-YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGA 135 (265)
T ss_pred ------------------cCCCceEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHH
Confidence 11235678999999 8899988775 356899999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
||+++ .++.++|+|||++.......... .......++..|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 136 nil~~---~~~~~~l~Dfg~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p 208 (265)
T cd06652 136 NILRD---SVGNVKLGDFGASKRLQTICLSG----TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPP 208 (265)
T ss_pred HEEec---CCCCEEECcCccccccccccccc----cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCC
Confidence 99994 77899999999998654321110 112345688899999999988899999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|...... ..+..+...... .......+..+.+++..|| .+|.+||++++|.+
T Consensus 209 ~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 209 WAEFEAM---AAIFKIATQPTN---PVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred CCccchH---HHHHHHhcCCCC---CCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence 9865332 222222211111 1112234577899999999 49999999887754
No 290
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.4e-36 Score=286.52 Aligned_cols=246 Identities=20% Similarity=0.243 Sum_probs=188.3
Q ss_pred eeecccCceeEEEEEEcCCCc--eEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVDTNE--IVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~--~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.||+|+||.||+|++.+++. .+|+|..+.... ...+.+|++++..+ +|++++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~------------------- 61 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL------------------- 61 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeE-------------------
Confidence 468999999999999987765 468887764322 23577899999998 66664443
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGF 150 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------------~~~~~~~~~~i~~qil~~L~~LH~~gi 150 (449)
..++......++||||+ +++|.+++.... ..+++.+++.++.|++.||+|||++|+
T Consensus 62 --------~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i 133 (270)
T cd05047 62 --------LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 133 (270)
T ss_pred --------EEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 33445566789999999 889999886432 247899999999999999999999999
Q ss_pred cccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHH
Q 013125 151 LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL 230 (449)
Q Consensus 151 iHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~ 230 (449)
+||||||+||++ ++++.+||+|||++....... .......+..|+|||++.+..++.++|||||||++|
T Consensus 134 ~H~dikp~nili---~~~~~~kl~dfgl~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ 202 (270)
T cd05047 134 IHRDLAARNILV---GENYVAKIADFGLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW 202 (270)
T ss_pred eecccccceEEE---cCCCeEEECCCCCccccchhh--------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHH
Confidence 999999999999 478899999999985322110 011223356799999999888999999999999999
Q ss_pred HHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Q 013125 231 YFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303 (449)
Q Consensus 231 el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~ 303 (449)
||++ |..||.+..... .+..+.. ..... .....+.++.+++.+||..+|.+||++.++...|++++
T Consensus 203 el~~~g~~pf~~~~~~~---~~~~~~~-~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 203 EIVSLGGTPYCGMTCAE---LYEKLPQ-GYRLE---KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHHcCCCCCccccCHHH---HHHHHhC-CCCCC---CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 9997 999997754322 2222211 11111 11335788999999999999999999999999888764
No 291
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=6.9e-36 Score=285.24 Aligned_cols=252 Identities=19% Similarity=0.248 Sum_probs=193.4
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++++.||.|+||.||+|++..+++.||||++..... ...+.+|+++++.++|+++++...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~-------------- 66 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD-------------- 66 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhh--------------
Confidence 48999999999999999999999999999998764322 235788999999999987665433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+..+.+..++||||+.++|..++... ...+++..++.++.|++.||+|||+.|++||||+|+||++
T Consensus 67 -------------~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill 133 (284)
T cd07860 67 -------------VIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 133 (284)
T ss_pred -------------hcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 23456788999999988888887654 3568999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++++.++|+|||++........ ......++..|+|||++.+.. ++.++|||||||++|||++|+.||.+
T Consensus 134 ---~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~ 203 (284)
T cd07860 134 ---NTEGAIKLADFGLARAFGVPVR-------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 203 (284)
T ss_pred ---CCCCCEEEeeccchhhcccCcc-------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 4788999999999875533211 112335678899999887654 68899999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhh---------------------cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 242 LKAATKKQKYDKICEKK---------------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
................. ............+.++.+++.+||..||.+||+++++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 204 DSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred CCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 54332211111100000 00011122234567889999999999999999988764
No 292
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3e-36 Score=286.43 Aligned_cols=253 Identities=19% Similarity=0.313 Sum_probs=198.1
Q ss_pred CCceEEeeeecccCceeEEEEEEcC-----CCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
.++|++++.||+|+||+||+|+... +.+.|++|........ ..+.+|+++++.++|++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~---------- 73 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRL---------- 73 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeee----------
Confidence 4789999999999999999999753 3467999987654332 458899999999998865443
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR--------RKFSLKTVLMLADQMIARIEYVHSR 148 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~--------~~~~~~~~~~i~~qil~~L~~LH~~ 148 (449)
..+.......|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++
T Consensus 74 -----------------~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~ 136 (275)
T cd05046 74 -----------------LGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA 136 (275)
T ss_pred -----------------EEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 33445567789999999 789999987533 1589999999999999999999999
Q ss_pred CccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHH
Q 013125 149 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYV 228 (449)
Q Consensus 149 giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~i 228 (449)
||+||||||+||+++ ..+.++|+|||++........ .......++..|++||.+.+..++.++||||||++
T Consensus 137 ~i~H~dlkp~Nili~---~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~ 207 (275)
T cd05046 137 RFVHRDLAARNCLVS---SQREVKVSLLSLSKDVYNSEY------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVL 207 (275)
T ss_pred CcccCcCccceEEEe---CCCcEEEcccccccccCcccc------cccCCceeEEeecChhhhccCCCCchhhHHHHHHH
Confidence 999999999999994 678999999999875432211 11234456778999999988889999999999999
Q ss_pred HHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 229 LLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 229 l~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
+|+|++ |..||...... ..+..+.......+. ...+|..+.+++.+||..+|.+||++.++...|.
T Consensus 208 l~~l~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 208 MWEVFTQGELPFYGLSDE---EVLNRLQAGKLELPV---PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHhCCCCCccccchH---HHHHHHHcCCcCCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 999998 88999765432 222222222222221 2345889999999999999999999999877653
No 293
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.2e-36 Score=280.24 Aligned_cols=250 Identities=21% Similarity=0.315 Sum_probs=196.1
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
..+|++.+.||.|+||.||+|.+. ++..+|+|++.... ....+..|+++++.++|++++..+.
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~--------------- 66 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYG--------------- 66 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEE---------------
Confidence 358999999999999999999885 46789999876543 2456889999999999887554433
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
+.......|+|+||+ +++|.+++......+++..++.++.|++.+|+|||+.|++||||||+||+++
T Consensus 67 ------------~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~ 134 (256)
T cd05112 67 ------------VCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG 134 (256)
T ss_pred ------------EEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc
Confidence 334556789999999 8899988876566789999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~ 242 (449)
.++.++|+|||++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus 135 ---~~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 205 (256)
T cd05112 135 ---ENQVVKVSDFGMTRFVLDDQYT------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR 205 (256)
T ss_pred ---CCCeEEECCCcceeecccCccc------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 7789999999999765432211 1123345678999999998889999999999999999998 99999764
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
... .....+... .....+ ...+..+.+++..||..+|++||++.++.+.|
T Consensus 206 ~~~---~~~~~~~~~-~~~~~~---~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 206 SNS---EVVETINAG-FRLYKP---RLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CHH---HHHHHHhCC-CCCCCC---CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 432 222222111 111111 22478899999999999999999999887654
No 294
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5e-36 Score=294.25 Aligned_cols=272 Identities=19% Similarity=0.196 Sum_probs=197.5
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++++|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|++++..+.......
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~------- 75 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSG------- 75 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccc-------
Confidence 46899999999999999999999999999999998765432 345788999999999998776543221110
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
................|+||||++++|.+++. ...++...++.++.||+.||+|||+.||+||||||+||++
T Consensus 76 ------~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili 147 (342)
T cd07854 76 ------SDLTEDVGSLTELNSVYIVQEYMETDLANVLE--QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFI 147 (342)
T ss_pred ------cccccccccccccceEEEEeecccccHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence 00000001122345689999999888888775 3568999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ .++..++|+|||++........... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 148 ~--~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~ 221 (342)
T cd07854 148 N--TEDLVLKIGDFGLARIVDPHYSHKG----YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAG 221 (342)
T ss_pred c--CCCceEEECCcccceecCCcccccc----ccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 5 3456899999999976543221110 0123357889999998754 5588999999999999999999999986
Q ss_pred ChhhcHHHHHHHH-------------------H---HhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKI-------------------C---EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i-------------------~---~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
............. . ......+........+.++.+++..||..||.+||++.++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 222 AHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 5432211111000 0 001111222333456788999999999999999999887743
No 295
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-37 Score=287.50 Aligned_cols=269 Identities=25% Similarity=0.328 Sum_probs=215.9
Q ss_pred CcccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHH--HcCCCcceeeEeecchhhhhh
Q 013125 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKI--LQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 2 ~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~--l~~~~~~~~~~~~~~~~~~~~ 79 (449)
.|.++...++.+.||+|.||+||+|.+ .|+.||||++... +...+.+|.+|++. |+|+|+..++....-.
T Consensus 206 QRTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr-dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~----- 277 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR-DERSWFRETEIYQTVMLRHENILGFIAADNKD----- 277 (513)
T ss_pred HHhhhheeEEEEEecCccccceeeccc--cCCceEEEEeccc-chhhhhhHHHHHHHHHhccchhhhhhhccccC-----
Confidence 466788999999999999999999998 6888999999863 45578999999976 7999987765533111
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-----C---Cc
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-----R---GF 150 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-----~---gi 150 (449)
.-.-...+||++|. .|+|.|++.. ..++....++++.-+++||++||. + .|
T Consensus 278 ------------------~gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaI 337 (513)
T KOG2052|consen 278 ------------------NGSWTQLWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAI 337 (513)
T ss_pred ------------------CCceEEEEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchh
Confidence 01235679999999 9999999974 779999999999999999999995 2 39
Q ss_pred cccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC------CCccchHHH
Q 013125 151 LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE------QSRRDDLES 224 (449)
Q Consensus 151 iHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~s~~~DvwS 224 (449)
.|||||..|||| .+++.+.|+|+|||...........++ .+..+||.+|||||++...- .-..+||||
T Consensus 338 AHRDlKSKNILV---Kkn~~C~IADLGLAv~h~~~t~~idi~---~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYa 411 (513)
T KOG2052|consen 338 AHRDLKSKNILV---KKNGTCCIADLGLAVRHDSDTDTIDIP---PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYA 411 (513)
T ss_pred hccccccccEEE---ccCCcEEEeeceeeEEecccCCcccCC---CCCccceeeccChHHhhhhcChhhhhhhhHHHHHH
Confidence 999999999999 489999999999998887765444443 46789999999999987431 234689999
Q ss_pred HHHHHHHHHhC----------CCCCCCChhhc-HHHHHHH-HHHhhcCCCHHHhhccCh--HHHHHHHHHHhCCCCCCCC
Q 013125 225 LGYVLLYFLRG----------SLPWQGLKAAT-KKQKYDK-ICEKKVSTPIEVLCKSHP--AEFASYFHYCQSLTFDQRP 290 (449)
Q Consensus 225 lG~il~el~~G----------~~pf~~~~~~~-~~~~~~~-i~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~p~~Rp 290 (449)
||.++||++.. ++||.+..+.+ ..+.+.+ ++..++.+.++..|+..| ..+.++|+.||..+|.-|.
T Consensus 412 fgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRl 491 (513)
T KOG2052|consen 412 FGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARL 491 (513)
T ss_pred HHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhh
Confidence 99999999862 68998765543 2233333 456777777787787766 4688999999999999999
Q ss_pred CHHHHHHHHHHHHH
Q 013125 291 DYGFLKRLFHDLFS 304 (449)
Q Consensus 291 ~~~~l~~~l~~~~~ 304 (449)
++-.|+..|.++..
T Consensus 492 tALriKKtl~~l~~ 505 (513)
T KOG2052|consen 492 TALRIKKTLAKLSN 505 (513)
T ss_pred HHHHHHHHHHHHhc
Confidence 98888888877653
No 296
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-37 Score=298.93 Aligned_cols=263 Identities=18% Similarity=0.274 Sum_probs=213.2
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
++-.++..++++||+|-||+|.+|+.. ...+||+|+++..... ..|.+|+++|..|+|+|+++++++|.
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~------- 605 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV------- 605 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee-------
Confidence 455677889999999999999999863 3689999999876442 35899999999999999999998874
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRK-FSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~-~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
.++..|+++||+ .|+|.+++.....+ ..-.....|+.||+.||+||.+.++|||||.+
T Consensus 606 --------------------~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~ 665 (807)
T KOG1094|consen 606 --------------------QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLAT 665 (807)
T ss_pred --------------------cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccc
Confidence 557889999999 99999999875333 35566678999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh--C
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR--G 235 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~--G 235 (449)
.|+|+ +..+++||+|||+++.+-.... |+.....+-+.+|||+|.+.-.+++.++|||+||+++||+++ .
T Consensus 666 rNcLv---~~e~~iKiadfgmsR~lysg~y-----y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~ 737 (807)
T KOG1094|consen 666 RNCLV---DGEFTIKIADFGMSRNLYSGDY-----YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCR 737 (807)
T ss_pred cceee---cCcccEEecCcccccccccCCc-----eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHh
Confidence 99999 5899999999999997665544 344556667889999999999999999999999999999875 7
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 301 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~ 301 (449)
..||..+.+....+....+..............-+|..+.++|..||..+-.+||+|++|...|.+
T Consensus 738 e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 738 EQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred hCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 899988776554444433333222211112223458999999999999999999999998776654
No 297
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=5.2e-36 Score=285.72 Aligned_cols=236 Identities=25% Similarity=0.351 Sum_probs=177.5
Q ss_pred eecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccC
Q 013125 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTL 88 (449)
Q Consensus 14 ~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (449)
.||+|+||.||+|.+..+++.||+|++..... .....+|..+++.+.... +
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~ 56 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD------------------------C 56 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCC------------------------C
Confidence 48999999999999999999999998764321 112344554444443211 1
Q ss_pred CCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCC
Q 013125 89 GGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 167 (449)
Q Consensus 89 ~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~ 167 (449)
+++..+......++..++||||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.
T Consensus 57 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~ 132 (279)
T cd05633 57 PFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DE 132 (279)
T ss_pred CcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CC
Confidence 23444444555677899999999 8889887764 4569999999999999999999999999999999999999 47
Q ss_pred CCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-CCCCCccchHHHHHHHHHHHHhCCCCCCCChhhc
Q 013125 168 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246 (449)
Q Consensus 168 ~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~ 246 (449)
++.++|+|||++........ ....|+..|+|||.+. +..++.++|||||||++|||++|..||.......
T Consensus 133 ~~~~~l~dfg~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 203 (279)
T cd05633 133 HGHVRISDLGLACDFSKKKP---------HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 203 (279)
T ss_pred CCCEEEccCCcceeccccCc---------cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC
Confidence 88999999999875543221 2346899999999987 4568999999999999999999999998654332
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
... ..... ...+ ..+....+.++.+++..||..||.+||+
T Consensus 204 ~~~-~~~~~---~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~ 243 (279)
T cd05633 204 KHE-IDRMT---LTVN-VELPDSFSPELKSLLEGLLQRDVSKRLG 243 (279)
T ss_pred HHH-HHHHh---hcCC-cCCccccCHHHHHHHHHHhcCCHHHhcC
Confidence 221 21111 1111 1223456789999999999999999994
No 298
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.4e-36 Score=282.28 Aligned_cols=248 Identities=24% Similarity=0.316 Sum_probs=198.3
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.+.||.|+||.||+|.+..+++.||+|++..... ...+..|+++++.++|++++..+...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~------------ 68 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRI------------ 68 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeee------------
Confidence 58999999999999999999999999999998764322 23467799999999998866554321
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH-----hCCccccC
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVH-----SRGFLHRD 154 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH-----~~giiHrD 154 (449)
....+...+++|||+ +++|.+++... ...+++..++.++.||+.||.||| +.+++|+|
T Consensus 69 -------------~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~d 135 (265)
T cd08217 69 -------------IDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRD 135 (265)
T ss_pred -------------ecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecC
Confidence 112455679999999 88999998754 457899999999999999999999 89999999
Q ss_pred CCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh
Q 013125 155 IKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 155 Lkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~ 234 (449)
|||+||+++ ..+.++|+|||++......... .....++..|++||++.+..++.++|+||||+++|+|++
T Consensus 136 l~p~nili~---~~~~~kl~d~g~~~~~~~~~~~-------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~ 205 (265)
T cd08217 136 LKPANIFLD---ANNNVKLGDFGLAKILGHDSSF-------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCA 205 (265)
T ss_pred CCHHHEEEe---cCCCEEEecccccccccCCccc-------ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHH
Confidence 999999994 7799999999999876543221 124568899999999999889999999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|..||...... .....+..... +......+..+.+++..||..+|.+||++++|.+
T Consensus 206 g~~p~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 206 LSPPFTARNQL---QLASKIKEGKF----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred CCCcccCcCHH---HHHHHHhcCCC----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 99999875422 22222222211 1223456789999999999999999999988754
No 299
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1e-36 Score=287.83 Aligned_cols=248 Identities=21% Similarity=0.337 Sum_probs=197.0
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|++++....
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~-------------- 66 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYG-------------- 66 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhhe--------------
Confidence 468899999999999999999999999999998775432 235788999999988887554332
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~Nil 161 (449)
.....+..++++|++ +++|.+++......++...+..++.|++.||+|||+ .|++|+||||+||+
T Consensus 67 -------------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~ 133 (265)
T cd06605 67 -------------AFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNIL 133 (265)
T ss_pred -------------eeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEE
Confidence 234557889999999 689999988655789999999999999999999999 99999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++ +++.++|+|||.+........ ....++..|++||.+.+..++.++|||||||++|+|++|..||..
T Consensus 134 ~~---~~~~~~l~d~g~~~~~~~~~~---------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 201 (265)
T cd06605 134 VN---SRGQIKLCDFGVSGQLVNSLA---------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPP 201 (265)
T ss_pred EC---CCCCEEEeecccchhhHHHHh---------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 94 678999999999875543221 125678899999999998999999999999999999999999976
Q ss_pred Chh--hcHHHHHHHHHHhhcCCCHHHhhcc-ChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKA--ATKKQKYDKICEKKVSTPIEVLCKS-HPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~--~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... .........+... ....+... .+.++.+++..||..+|.+||++.++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 202 ENDPPDGIFELLQYIVNE----PPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred cccccccHHHHHHHHhcC----CCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 421 1111222222221 11111111 5788999999999999999999888754
No 300
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.3e-36 Score=282.93 Aligned_cols=246 Identities=20% Similarity=0.224 Sum_probs=197.5
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.++||+|+||.||++.+..+++.||+|.+.... ....+.+|+.+++.++|++++..
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~---------------- 64 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQY---------------- 64 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeee----------------
Confidence 6999999999999999999999999999999876421 23357889999999988765443
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
..+....++.|+|+|++ +++|.+.+... ...++..+++.++.|++.||.|||++|++|+||+|+||+
T Consensus 65 -----------~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil 133 (256)
T cd08218 65 -----------QESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIF 133 (256)
T ss_pred -----------EeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEE
Confidence 33345667899999999 88999888753 346899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++ .++.++|+|||++......... .....|+..|+|||++.+..++.++|+|||||++|+|++|+.||..
T Consensus 134 ~~---~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~ 203 (256)
T cd08218 134 LT---KDGTIKLGDFGIARVLNSTVEL-------ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEA 203 (256)
T ss_pred Ec---CCCCEEEeeccceeecCcchhh-------hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccC
Confidence 94 6788999999999866443211 1234578899999999988899999999999999999999999975
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... ...+..+....... .....+.++.+++..||..+|.+||++.++.+
T Consensus 204 ~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 204 GNM---KNLVLKIIRGSYPP----VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CCH---HHHHHHHhcCCCCC----CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 432 23333333322211 22345789999999999999999999988754
No 301
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.2e-36 Score=283.66 Aligned_cols=255 Identities=22% Similarity=0.293 Sum_probs=199.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.+.||.|+||+||+|.+..++..||+|++.... ....+.+|+++++.++|++++....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~-------------- 66 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYT-------------- 66 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEE--------------
Confidence 47999999999999999999998889999999986532 2345788999999998887555432
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR--RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~--~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.....+..++|+|++ +++|.+++.... ..+++..+..++.||+.||+|||+.|++||||+|+||
T Consensus 67 -------------~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni 133 (267)
T cd06610 67 -------------SFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNI 133 (267)
T ss_pred -------------EEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhE
Confidence 334567889999999 889999987542 4689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+++ +++.++|+|||++..+....... ........|+..|++||++... .++.++|+|||||++|+|++|+.||
T Consensus 134 ~~~---~~~~~~l~df~~~~~~~~~~~~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~ 207 (267)
T cd06610 134 LLG---EDGSVKIADFGVSASLADGGDRT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPY 207 (267)
T ss_pred EEc---CCCCEEEcccchHHHhccCcccc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCc
Confidence 994 67899999999997766543221 0112355789999999998877 7899999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCC-CHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVST-PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
...... ..+.++....... +.......+++.+.+++..||..+|++||++.+|..
T Consensus 208 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 208 SKYPPM---KVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cccChh---hhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 765442 2222222221111 111112356789999999999999999999887754
No 302
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.6e-36 Score=282.09 Aligned_cols=247 Identities=24% Similarity=0.323 Sum_probs=193.4
Q ss_pred eeecccCceeEEEEEEcC-CC--ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 13 RKIGSGSFGEIFLASHVD-TN--EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~-~~--~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
++||+|+||.||+|.+.. ++ ..||||.+..... ...+.+|+++++.++|++++..+..
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~---------------- 64 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGV---------------- 64 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEE----------------
Confidence 478999999999999865 33 3699998876533 3357889999999999886654332
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~ 164 (449)
... ...++|+|++ +++|.+.+.... ..+++..+..++.|++.||.|||++|++||||||+||++.
T Consensus 65 -----------~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~- 131 (257)
T cd05040 65 -----------VLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA- 131 (257)
T ss_pred -----------EcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe-
Confidence 223 6789999999 899999887644 5689999999999999999999999999999999999994
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCCh
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLK 243 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~ 243 (449)
.++.+||+|||++......... +.......++..|++||.+.+..++.++|||||||++|||++ |..||....
T Consensus 132 --~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 205 (257)
T cd05040 132 --SDDKVKIGDFGLMRALPQNEDH----YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS 205 (257)
T ss_pred --cCCEEEeccccccccccccccc----eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 6789999999999876543221 122234567788999999999899999999999999999998 999997654
Q ss_pred hhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
... ....+.......+ .....|..+.+++..||..+|++||++.++.+.|.
T Consensus 206 ~~~---~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 206 GSQ---ILKKIDKEGERLE---RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHH---HHHHHHhcCCcCC---CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 432 2222222111111 12345789999999999999999999999987663
No 303
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4e-36 Score=289.47 Aligned_cols=270 Identities=21% Similarity=0.273 Sum_probs=204.2
Q ss_pred CcccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhh
Q 013125 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVII 77 (449)
Q Consensus 2 ~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 77 (449)
+....++|++.++||+|+||.||+|.+..+++.||+|+++.... ...+.+|+++++.++|++++.......+...
T Consensus 2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~- 80 (302)
T cd07864 2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQD- 80 (302)
T ss_pred chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcch-
Confidence 45567899999999999999999999998999999998865322 2346789999999999988776554322110
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
...+.......|+|+||+++++.+++......+++..++.++.||+.||.|||+.||+||||||
T Consensus 81 ----------------~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p 144 (302)
T cd07864 81 ----------------ALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKC 144 (302)
T ss_pred ----------------hhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 0011123347899999998888888776556799999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~ 236 (449)
+||++ ++.+.+||+|||++......... + .....++..|++||.+.+. .++.++|||||||++|||++|+
T Consensus 145 ~nili---~~~~~~kl~dfg~~~~~~~~~~~---~---~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 145 SNILL---NNKGQIKLADFGLARLYNSEESR---P---YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred HHEEE---CCCCcEEeCcccccccccCCccc---c---cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 99999 47889999999999866543321 1 1233567889999988654 4788999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCC----------------------CHHHhhccChHHHHHHHHHHhCCCCCCCCCHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVST----------------------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~----------------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 294 (449)
+||...........+...+...... .....+...|..+.+++..||..+|.+||++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 295 (302)
T cd07864 216 PIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEE 295 (302)
T ss_pred CCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9998655443333333322111100 011223456889999999999999999999887
Q ss_pred HHH
Q 013125 295 LKR 297 (449)
Q Consensus 295 l~~ 297 (449)
+..
T Consensus 296 il~ 298 (302)
T cd07864 296 ALN 298 (302)
T ss_pred Hhc
Confidence 743
No 304
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.6e-36 Score=284.12 Aligned_cols=241 Identities=28% Similarity=0.350 Sum_probs=195.1
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+|++.++||.|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++|++++..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~--------------- 65 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNL--------------- 65 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHH---------------
Confidence 5999999999999999999999899999999886432 23457889999999998875443
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
..+....+..|+|+||+ +++|.+.+... ..++...++.++.||+.||.|||++|++|+||+|+||+
T Consensus 66 ------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil 132 (258)
T cd05578 66 ------------WYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNIL 132 (258)
T ss_pred ------------HHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeE
Confidence 22335677899999999 88999888753 57899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ ++++.++|+|||++........ .....|+..|++||.+.+..++.++|+||||+++|+|++|..||..
T Consensus 133 ~---~~~~~~~l~d~~~~~~~~~~~~--------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 201 (258)
T cd05578 133 L---DEQGHVHITDFNIATKVTPDTL--------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRG 201 (258)
T ss_pred E---cCCCCEEEeecccccccCCCcc--------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCC
Confidence 9 4788999999999876544321 1345678899999999988899999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
............... .........+..+.+++..||..+|.+||++
T Consensus 202 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~ 247 (258)
T cd05578 202 HSRTIRDQIRAKQET-----ADVLYPATWSTEAIDAINKLLERDPQKRLGD 247 (258)
T ss_pred CCccHHHHHHHHhcc-----ccccCcccCcHHHHHHHHHHccCChhHcCCc
Confidence 654322222221111 1122224567899999999999999999998
No 305
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=7.7e-36 Score=279.59 Aligned_cols=245 Identities=22% Similarity=0.335 Sum_probs=192.1
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
++||.|+||.||+|.+.. ++.||+|+...... ...+.+|+++++.+.|++++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~---------------------- 57 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKL---------------------- 57 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEE----------------------
Confidence 479999999999999977 89999998765433 2357889999999988765443
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
..++......++|||++ +++|.+++......++...++.++.|++.+|.|||++|++||||||+||++ +.+
T Consensus 58 -----~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~ 129 (251)
T cd05041 58 -----IGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GEN 129 (251)
T ss_pred -----EEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCC
Confidence 33445667889999999 889999887656678999999999999999999999999999999999999 478
Q ss_pred CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChhhcH
Q 013125 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATK 247 (449)
Q Consensus 169 ~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~ 247 (449)
+.++|+|||++.......... .......+..|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 130 ~~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~ 204 (251)
T cd05041 130 NVLKISDFGMSREEEGGIYTV-----SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT 204 (251)
T ss_pred CcEEEeeccccccccCCccee-----ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH
Confidence 899999999997654221110 0112234567999999998889999999999999999999 8999977654322
Q ss_pred HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 248 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 248 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
... .......+. ....|.++.+++.+||..+|.+||++.+|.+.|+
T Consensus 205 ~~~----~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 205 RER----IESGYRMPA---PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHH----HhcCCCCCC---CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 222 111111111 2345789999999999999999999999988764
No 306
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.6e-36 Score=288.71 Aligned_cols=256 Identities=21% Similarity=0.247 Sum_probs=196.1
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc----hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
++|++.+.||.|+||.||+|.+..+++.||+|.++..... ..+.+|+.+++.++|++++......
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~----------- 73 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVV----------- 73 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEE-----------
Confidence 5799999999999999999999989999999988654322 2356899999999988766544322
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
.+.+....|+|+||++++|.+++......+++..++.++.||+.||+|||++|++||||||+||++
T Consensus 74 --------------~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili 139 (293)
T cd07843 74 --------------VGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL 139 (293)
T ss_pred --------------EecCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE
Confidence 122337899999999889999887766679999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+..+.++|+|||++......... .....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||..
T Consensus 140 ---~~~~~~~l~d~g~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~ 209 (293)
T cd07843 140 ---NNRGILKICDFGLAREYGSPLKP-------YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPG 209 (293)
T ss_pred ---CCCCcEEEeecCceeeccCCccc-------cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 47789999999999876554211 12345688999999987654 68999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcC-------------------C---CHHHhhcc--ChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVS-------------------T---PIEVLCKS--HPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~-------------------~---~~~~~~~~--~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.........+...+..... . ........ .++.+.+++..||..+|++||++.++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 210 KSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred CChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 5543322222111110000 0 00001111 3677999999999999999999887743
No 307
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.4e-36 Score=283.54 Aligned_cols=240 Identities=15% Similarity=0.188 Sum_probs=179.0
Q ss_pred eeecccCceeEEEEEEcC------------CCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 13 RKIGSGSFGEIFLASHVD------------TNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~------------~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
+.||+|+||.||+|+... ....||+|++..... ...+..|+.+++.++|++++..++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~--------- 71 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYG--------- 71 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEE---------
Confidence 468999999999998532 223589998765422 224677888889898887655443
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
++......++||||+ +++|..++......++...++.++.||+.||+|||++||+||||||
T Consensus 72 ------------------~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp 133 (262)
T cd05077 72 ------------------VCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCT 133 (262)
T ss_pred ------------------EEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCc
Confidence 344556779999999 6777777665556799999999999999999999999999999999
Q ss_pred CcEEeecCC----CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-CCCCCccchHHHHHHHHHHH
Q 013125 158 DNFLMGLGR----KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-GIEQSRRDDLESLGYVLLYF 232 (449)
Q Consensus 158 ~Nill~~~~----~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~~DvwSlG~il~el 232 (449)
+|||+.... ....++++|||++...... ....++..|+|||.+. +..++.++|||||||++|||
T Consensus 134 ~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el 202 (262)
T cd05077 134 KNILLAREGIDGECGPFIKLSDPGIPITVLSR-----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202 (262)
T ss_pred ccEEEecCCccCCCCceeEeCCCCCCccccCc-----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHH
Confidence 999995211 1124899999998654321 2345788899999887 46689999999999999999
Q ss_pred H-hCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 233 L-RGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 233 ~-~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
+ .|..||......... ......... ....+.++.+++..||..||.+||++.+|.+.|
T Consensus 203 ~~~~~~p~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 203 CYNGEIPLKDKTLAEKE----RFYEGQCML-----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HhCCCCCCCCcchhHHH----HHHhcCccC-----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 8 588988764432211 111111111 112357899999999999999999999887654
No 308
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.2e-35 Score=289.79 Aligned_cols=252 Identities=23% Similarity=0.272 Sum_probs=197.3
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
++++|++.+.||.|+||.||+|.+..+++.||+|.+... .....+..|+++++.++|++++.....
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~---------- 77 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDI---------- 77 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeee----------
Confidence 678999999999999999999999999999999976532 123457789999999999886654332
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+.......|+++|+++++|..++. ...++...+..++.||+.||.|||++||+||||+|+||
T Consensus 78 ----------------~~~~~~~~~lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Ni 139 (328)
T cd07856 78 ----------------FISPLEDIYFVTELLGTDLHRLLT--SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNI 139 (328)
T ss_pred ----------------EecCCCcEEEEeehhccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence 122345789999999999988775 35688899999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
++ ++.+.++|+|||++....... ....++..|++||.+.+ ..++.++|||||||++|+|++|..||
T Consensus 140 li---~~~~~~~l~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f 206 (328)
T cd07856 140 LI---NENCDLKICDFGLARIQDPQM----------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLF 206 (328)
T ss_pred eE---CCCCCEEeCccccccccCCCc----------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCC
Confidence 99 478899999999987543211 24467889999998876 56899999999999999999999999
Q ss_pred CCChhhcHHHHHHHHH-----------------------HhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 240 QGLKAATKKQKYDKIC-----------------------EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
.+.........+.+.. ......+........+.++.+++..||..+|++||++.++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell 286 (328)
T cd07856 207 PGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286 (328)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 8754322211111110 01112233444556788999999999999999999988774
Q ss_pred H
Q 013125 297 R 297 (449)
Q Consensus 297 ~ 297 (449)
.
T Consensus 287 ~ 287 (328)
T cd07856 287 A 287 (328)
T ss_pred c
Confidence 4
No 309
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6e-36 Score=283.71 Aligned_cols=256 Identities=20% Similarity=0.311 Sum_probs=196.6
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.++|++.+.||.|+||.||+|.+..+++.|++|++..... .+.+.+|+.+++.+ .|++++..+........
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~------- 77 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP------- 77 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCC-------
Confidence 5899999999999999999999988899999999875433 34678899999998 58876666554322100
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
...+...|+||||+ +++|.+++... ...++...++.++.|++.||+|||++|++|+||+|+|
T Consensus 78 --------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~n 143 (275)
T cd06608 78 --------------PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQN 143 (275)
T ss_pred --------------CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHH
Confidence 02356689999999 78999887653 3679999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-----CCCCccchHHHHHHHHHHHHh
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-----IEQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~~DvwSlG~il~el~~ 234 (449)
|+++ +++.++|+|||++........ ......++..|+|||++.. ..++.++|||||||++|+|++
T Consensus 144 i~~~---~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~ 213 (275)
T cd06608 144 ILLT---KNAEVKLVDFGVSAQLDSTLG-------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD 213 (275)
T ss_pred EEEc---cCCeEEECCCccceecccchh-------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence 9994 678999999999876543221 1234568899999998754 346889999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|..||...... .....+...... .. .....++.++.+++..||..||.+||++.+|.+
T Consensus 214 g~~p~~~~~~~---~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 214 GKPPLCDMHPM---RALFKIPRNPPP-TL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred CCCCccccchH---HHHHHhhccCCC-CC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 99999764332 122222211111 00 011235678999999999999999999988754
No 310
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=7.9e-36 Score=283.02 Aligned_cols=251 Identities=26% Similarity=0.390 Sum_probs=195.2
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----C--------chhHHHHHHHHHHHcCCCcceeeEeecchh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----K--------HPQLLYEAKVYKILQGGSKIRLVVFHVDHV 75 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~--------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 75 (449)
+|.+.+.||.|+||.||+|.+..+++.||+|.+.... . .+.+..|+++++.++|++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~-------- 73 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQY-------- 73 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceE--------
Confidence 6999999999999999999998899999999765321 0 1235678888888888765443
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRD 154 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrD 154 (449)
..++...+..++||||+ +++|.+++... ..++...++.++.||+.||.|||++|++|||
T Consensus 74 -------------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d 133 (272)
T cd06629 74 -------------------LGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRD 133 (272)
T ss_pred -------------------EEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecC
Confidence 34445667889999999 89999988764 5789999999999999999999999999999
Q ss_pred CCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC--CCccchHHHHHHHHHHH
Q 013125 155 IKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE--QSRRDDLESLGYVLLYF 232 (449)
Q Consensus 155 Lkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DvwSlG~il~el 232 (449)
|+|+||++ +.++.++|+|||++......... .......++..|+|||++.... ++.++|+||||+++||+
T Consensus 134 l~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l 205 (272)
T cd06629 134 LKADNLLV---DADGICKISDFGISKKSDDIYDN-----DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEM 205 (272)
T ss_pred CChhhEEE---cCCCeEEEeeccccccccccccc-----cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHH
Confidence 99999999 47889999999998764332111 0123456889999999988655 78999999999999999
Q ss_pred HhCCCCCCCChhhcHHHHHHHHHHhh-cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 233 LRGSLPWQGLKAATKKQKYDKICEKK-VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 233 ~~G~~pf~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
++|..||...... .....+.... ...........++.++.+++..||..+|++||+++++.+
T Consensus 206 ~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 206 FAGRRPWSDEEAI---AAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HhCCCCCcCcchH---HHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 9999999654322 2222221111 111123344566889999999999999999999888754
No 311
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=5.3e-36 Score=293.50 Aligned_cols=264 Identities=20% Similarity=0.291 Sum_probs=200.6
Q ss_pred CcccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHH-cCCCcceeeEeecchhh
Q 013125 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 2 ~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~ 76 (449)
+..+.++|++.+.||+|+||.||+|.+..+++.||+|.+... .....+.+|+.+++.+ +|++++..++.+.
T Consensus 2 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~---- 77 (337)
T cd07852 2 DKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIK---- 77 (337)
T ss_pred CchhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeec----
Confidence 456779999999999999999999999888999999976432 2233467899999999 8887666543221
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
..+....|+|||++.++|..++.. ..+++..++.++.||+.||+|||++||+|||||
T Consensus 78 ---------------------~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~ 134 (337)
T cd07852 78 ---------------------AENDKDIYLVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLK 134 (337)
T ss_pred ---------------------cCCCceEEEEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 123456899999998899888764 378899999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhC
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G 235 (449)
|+||++ +.++.++|+|||++........... ........|+..|++||++.+ ..++.++|||||||++|+|++|
T Consensus 135 p~nill---~~~~~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg 209 (337)
T cd07852 135 PSNILL---NSDCRVKLADFGLARSLSELEENPE--NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLG 209 (337)
T ss_pred HHHEEE---cCCCcEEEeeccchhcccccccccc--CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhC
Confidence 999999 4788999999999987654332110 011234568999999998765 4578999999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHH-----------------------HhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 236 SLPWQGLKAATKKQKYDKIC-----------------------EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
+.||.+.........+.... ......+.......++.++.+++..||..+|++||++
T Consensus 210 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~ 289 (337)
T cd07852 210 KPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTA 289 (337)
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCH
Confidence 99997654332211111110 0011112233344568899999999999999999998
Q ss_pred HHHHH
Q 013125 293 GFLKR 297 (449)
Q Consensus 293 ~~l~~ 297 (449)
.++.+
T Consensus 290 ~~il~ 294 (337)
T cd07852 290 EEALE 294 (337)
T ss_pred HHHhh
Confidence 88755
No 312
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-37 Score=305.06 Aligned_cols=209 Identities=23% Similarity=0.378 Sum_probs=175.4
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC---CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG---TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
+.-|...+.||+|+||.||+++++.+|+.||||.++.. ...+...+|++++++|+|+|++..+++-...
T Consensus 12 ~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~-------- 83 (732)
T KOG4250|consen 12 NYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETK-------- 83 (732)
T ss_pred CcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCcc--------
Confidence 35577889999999999999999999999999998763 4456789999999999999998876543221
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC--RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~--~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
..+.-...-++||||| ||+|...+... ...+++.+++.++..+..||.|||++||+||||||.|
T Consensus 84 -------------~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~N 150 (732)
T KOG4250|consen 84 -------------FLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGN 150 (732)
T ss_pred -------------ccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Confidence 1112345668999999 99999998753 2459999999999999999999999999999999999
Q ss_pred EEeecCCCC-CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCC
Q 013125 160 FLMGLGRKA-NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 160 ill~~~~~~-~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
|++-.+.+. -.-||+|||.|+...+... ..+++||..|++||++.. ..|+..+|.|||||++|+++||..
T Consensus 151 Ivl~~Gedgq~IyKLtDfG~Arel~d~s~--------~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~l 222 (732)
T KOG4250|consen 151 IVLQIGEDGQSIYKLTDFGAARELDDNSL--------FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGEL 222 (732)
T ss_pred EEEeecCCCceEEeeecccccccCCCCCe--------eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCC
Confidence 998665433 3457999999998876653 358999999999999884 789999999999999999999999
Q ss_pred CCCCCh
Q 013125 238 PWQGLK 243 (449)
Q Consensus 238 pf~~~~ 243 (449)
||....
T Consensus 223 PF~p~~ 228 (732)
T KOG4250|consen 223 PFIPFG 228 (732)
T ss_pred CCCcCC
Confidence 996543
No 313
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.2e-36 Score=289.62 Aligned_cols=246 Identities=22% Similarity=0.295 Sum_probs=195.7
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.+.|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+++++.+.|++++....
T Consensus 3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~------------- 69 (277)
T cd06642 3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYG------------- 69 (277)
T ss_pred HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhc-------------
Confidence 3568888999999999999999988899999998764332 234778999999998887555433
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
++...+..|+||||+ +++|.+++. ...++...++.++.||+.||.|||++|++|+||+|+||+
T Consensus 70 --------------~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~ 133 (277)
T cd06642 70 --------------SYLKGTKLWIIMEYLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVL 133 (277)
T ss_pred --------------ccccCCceEEEEEccCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEE
Confidence 334567789999999 788888775 456899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+. +++.++|+|||++........ ......++..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 134 i~---~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06642 134 LS---EQGDVKLADFGVAGQLTDTQI-------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred Ee---CCCCEEEccccccccccCcch-------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcc
Confidence 94 678999999999876543221 11345678899999999998899999999999999999999999976
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
...... ...+.. .. ........+.++.+++..||..+|++||++.++..
T Consensus 204 ~~~~~~---~~~~~~-~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 204 LHPMRV---LFLIPK-NS---PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred cchhhH---Hhhhhc-CC---CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 543221 111111 11 11222345788999999999999999999998865
No 314
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.2e-37 Score=297.89 Aligned_cols=231 Identities=23% Similarity=0.279 Sum_probs=186.9
Q ss_pred CCcccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 1 ~~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
+|+++.+||.+....|+|-|++|..|.|..-+..|||||+.+.. .+..-+.|++||++|+.......+
T Consensus 426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~----------- 494 (752)
T KOG0670|consen 426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKF----------- 494 (752)
T ss_pred hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhh-----------
Confidence 47889999999999999999999999999888899999998754 355578999999999866532211
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~--~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
++..+.-.+...+|+|||+|.+..+|.++++..++. +.+..+..|+.||..||..|-.+||+|.||||
T Consensus 495 ----------Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKP 564 (752)
T KOG0670|consen 495 ----------HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKP 564 (752)
T ss_pred ----------HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCc
Confidence 111121123456899999999999999999976654 78899999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+||||. .....+||||||.|........ . .+..+..|.|||+++|.+|+...|+||.||+||||.||+.
T Consensus 565 DNiLVN--E~k~iLKLCDfGSA~~~~enei---t------PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkI 633 (752)
T KOG0670|consen 565 DNILVN--ESKNILKLCDFGSASFASENEI---T------PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKI 633 (752)
T ss_pred cceEec--cCcceeeeccCccccccccccc---c------HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccce
Confidence 999996 4567899999999976654332 2 3345678999999999999999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHh
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVL 266 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 266 (449)
.|.|..+. +++...++.+..+|-..+
T Consensus 634 lFpG~TNN---~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 634 LFPGRTNN---QMLRLFMELKGKFPNKML 659 (752)
T ss_pred ecCCCCcH---HHHHHHHHhcCCCcHHHh
Confidence 99997665 344444555555654433
No 315
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.2e-36 Score=292.15 Aligned_cols=247 Identities=19% Similarity=0.307 Sum_probs=193.4
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
+.|....+||.|+||.||+|.+..++..||||.+.... ....+.+|+.+++.++|++++..+.
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~--------------- 86 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYN--------------- 86 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHH---------------
Confidence 45666788999999999999998899999999876432 2335778999999999887655432
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
....++..|+||||+ +++|.+++. ...++...++.++.||+.||+|||++||+||||||+||+++
T Consensus 87 ------------~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~ 152 (292)
T cd06658 87 ------------SYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 152 (292)
T ss_pred ------------heecCCeEEEEEeCCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc
Confidence 224567889999999 778888765 34689999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCCh
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~ 243 (449)
+++.++|+|||++........ ......|+..|+|||.+.+..++.++||||||+++|||++|..||....
T Consensus 153 ---~~~~~kL~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~ 222 (292)
T cd06658 153 ---SDGRIKLSDFGFCAQVSKEVP-------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP 222 (292)
T ss_pred ---CCCCEEEccCcchhhcccccc-------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 678999999999875433221 1234568899999999998889999999999999999999999998654
Q ss_pred hhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... .+..+.. ....... .....+..+.+++..||..+|.+||+++++.+
T Consensus 223 ~~~---~~~~~~~-~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 223 PLQ---AMRRIRD-NLPPRVK-DSHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred HHH---HHHHHHh-cCCCccc-cccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 322 2222211 1111111 11234678999999999999999999988755
No 316
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.2e-36 Score=286.64 Aligned_cols=240 Identities=18% Similarity=0.246 Sum_probs=181.7
Q ss_pred eeecccCceeEEEEEEcCCCc-------eEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 13 RKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~-------~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+.||+|+||.||+|.+...+. .||+|+...... ...+..|+.+++.+.|++++...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~-------------- 66 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYG-------------- 66 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheee--------------
Confidence 479999999999998865443 488888754322 235778889999998887655443
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+...+...++||||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 67 -------------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili 133 (258)
T cd05078 67 -------------VCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLL 133 (258)
T ss_pred -------------EEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE
Confidence 334456789999999 889999987666678999999999999999999999999999999999999
Q ss_pred ecCC-----CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhC-
Q 013125 163 GLGR-----KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRG- 235 (449)
Q Consensus 163 ~~~~-----~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G- 235 (449)
+..+ ....++++|||++...... ....++..|+|||++.+. .++.++|||||||++|||++|
T Consensus 134 ~~~~~~~~~~~~~~~l~d~g~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~ 202 (258)
T cd05078 134 IREEDRKTGNPPFIKLSDPGISITVLPK-----------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGG 202 (258)
T ss_pred ecccccccCCCceEEecccccccccCCc-----------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCC
Confidence 6321 1124799999998654321 245678899999999874 479999999999999999998
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
..||......... .+.......| .....++.+++..||+.+|++||++++|.+.|
T Consensus 203 ~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 203 DKPLSALDSQKKL----QFYEDRHQLP-----APKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred CCChhhccHHHHH----HHHHccccCC-----CCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 4666554332211 1222222222 22346899999999999999999999887654
No 317
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.4e-35 Score=279.49 Aligned_cols=249 Identities=26% Similarity=0.362 Sum_probs=202.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|++.+..++|++++...
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~--------------- 65 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCY--------------- 65 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEE---------------
Confidence 478999999999999999999999999999998876533 44688899999999888655543
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~Nil 161 (449)
.+....+..++|+||+ +++|.+++.. ...++...++.++.|++.||+|||+ .|++||||+|+||+
T Consensus 66 ------------~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~ 132 (264)
T cd06623 66 ------------GAFYKEGEISIVLEYMDGGSLADLLKK-VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLL 132 (264)
T ss_pred ------------EEEccCCeEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEE
Confidence 3345567899999999 7999999876 3679999999999999999999999 99999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ +.++.++|+|||++......... .....++..|++||.+.+..++.++|+||||+++|+|++|..||..
T Consensus 133 ~---~~~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~ 202 (264)
T cd06623 133 I---NSKGEVKIADFGISKVLENTLDQ-------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLP 202 (264)
T ss_pred E---CCCCCEEEccCccceecccCCCc-------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 9 47889999999999866543321 1244678899999999998899999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhcc-ChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKS-HPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.......+....+.... ....... ++..+.+++..||..+|++||++.++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 203 PGQPSFFELMQAICDGP----PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred ccccCHHHHHHHHhcCC----CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 64322233333333221 1222233 6889999999999999999999988865
No 318
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.4e-36 Score=284.19 Aligned_cols=249 Identities=20% Similarity=0.315 Sum_probs=189.7
Q ss_pred eeecccCceeEEEEEEcCCC------ceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 13 RKIGSGSFGEIFLASHVDTN------EIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~------~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+.||+|+||.||+|++.... +.||+|.+.... ....+.+|+++++.++|++++..++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-------------- 66 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLG-------------- 66 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEee--------------
Confidence 46899999999999986544 679999876432 2345788999999999987665443
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~------~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
++......++|||++ +++|.+++... ...+++.+++.++.||+.||+|||+++++|+|||
T Consensus 67 -------------~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~ 133 (269)
T cd05044 67 -------------VCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLA 133 (269)
T ss_pred -------------eecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 234456789999999 89999888642 1347889999999999999999999999999999
Q ss_pred CCcEEeecCC--CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh
Q 013125 157 PDNFLMGLGR--KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 157 p~Nill~~~~--~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~ 234 (449)
|+||++...+ ....++|+|||++......... .......++..|+|||++.+..++.++|||||||++|||++
T Consensus 134 p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt 208 (269)
T cd05044 134 ARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILT 208 (269)
T ss_pred hheEEEecCCCCCCcceEECCccccccccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHH
Confidence 9999995221 1238999999999765433211 11223455788999999999999999999999999999998
Q ss_pred -CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 235 -GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 235 -G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
|..||....... ....+... .... .....|..+.+++.+||..+|.+||+++++.+.|+
T Consensus 209 ~g~~p~~~~~~~~---~~~~~~~~-~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 209 LGQQPYPALNNQE---VLQHVTAG-GRLQ---KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cCCCCCcccCHHH---HHHHHhcC-CccC---CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 999997654432 22222111 1111 12345789999999999999999999999988765
No 319
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-39 Score=283.72 Aligned_cols=227 Identities=25% Similarity=0.332 Sum_probs=182.3
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecC---CCCc-hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENS---GTKH-PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~---~~~~-~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
..+.|.-..+||+|.||+||+|+...+++.||+|+.-- .+.. ....+|+++|+.|+|++.+.++..|....
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~----- 89 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKA----- 89 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhcc-----
Confidence 35678889999999999999999999999999985432 2222 23689999999999999877655443221
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.+. ..+...+|+|+++|..+|.-++.....+|+..++..++.+++.||.|+|...|+|||+|++|+
T Consensus 90 ----------Tp~----~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNv 155 (376)
T KOG0669|consen 90 ----------TPT----NRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANV 155 (376)
T ss_pred ----------CCc----ccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhE
Confidence 000 013345899999999999999877667899999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
||+ .++.+||+|||+++.+.........- ....+.|.+|++||.++|. .|+...|||..||++.||++|++.+
T Consensus 156 LIt---~dgilklADFGlar~fs~~~n~~kpr---ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspim 229 (376)
T KOG0669|consen 156 LIT---KDGILKLADFGLARAFSTSKNVVKPR---YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIM 229 (376)
T ss_pred EEc---CCceEEeeccccccceecccccCCCC---cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccc
Confidence 994 78999999999998776554332211 2456779999999998876 4899999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHH
Q 013125 240 QGLKAATKKQKYDKICE 256 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~ 256 (449)
++.........+..+++
T Consensus 230 qgnteqqql~~Is~LcG 246 (376)
T KOG0669|consen 230 QGNTEQQQLHLISQLCG 246 (376)
T ss_pred cCChHHHHHHHHHHHhc
Confidence 99877655555554443
No 320
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.5e-35 Score=287.73 Aligned_cols=246 Identities=23% Similarity=0.317 Sum_probs=195.5
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
....|...+.||+|+||.||+|++..++..||+|++..... ...+.+|+++++.++|++++...+
T Consensus 23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~---------- 92 (317)
T cd06635 23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKG---------- 92 (317)
T ss_pred chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEE----------
Confidence 34568899999999999999999998999999998764322 124778999999999887655443
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
+....+..++||||+.++|.+++......+++.++..++.||+.||.|||++||+||||+|+|
T Consensus 93 -----------------~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~N 155 (317)
T cd06635 93 -----------------CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGN 155 (317)
T ss_pred -----------------EEeeCCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCccc
Confidence 334566789999999889988887667779999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc---CCCCCccchHHHHHHHHHHHHhCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
|++ +.++.++|+|||++...... ....++..|+|||++. ...++.++|||||||++|||++|.
T Consensus 156 il~---~~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~ 221 (317)
T cd06635 156 ILL---TEPGQVKLADFGSASIASPA-----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 221 (317)
T ss_pred EEE---CCCCCEEEecCCCccccCCc-----------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCC
Confidence 999 47789999999998643321 2456788999999874 345889999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.||...... .....+........ .....+..+.+++.+||..+|.+||++.++.+
T Consensus 222 ~p~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 276 (317)
T cd06635 222 PPLFNMNAM---SALYHIAQNESPTL---QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLK 276 (317)
T ss_pred CCCCCccHH---HHHHHHHhccCCCC---CCccccHHHHHHHHHHccCCcccCcCHHHHHh
Confidence 999875332 22222222222111 12334678999999999999999999988765
No 321
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=274.04 Aligned_cols=265 Identities=21% Similarity=0.340 Sum_probs=203.6
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchh---HHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ---LLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~---~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
.+++.-||.|+.|+||+++...+|...|||.+....+.++ ++..+.++-+-
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s-------------------------- 147 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS-------------------------- 147 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc--------------------------
Confidence 3467789999999999999999999999998876555433 33333333221
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCcEEeec
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGL 164 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~-giiHrDLkp~Nill~~ 164 (449)
.+.++|+....|+.....+++.||+|+.-+..+++...+++++..+-++..-++.||.||.++ ||||||+||+|||+
T Consensus 148 ~dcpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl-- 225 (391)
T KOG0983|consen 148 HDCPYIVQCFGYFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL-- 225 (391)
T ss_pred cCCCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE--
Confidence 123356666677777888899999998888888887778899999999999999999999985 89999999999999
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc---CCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
|+.|.+||+|||+|-++.+.... ..-.|-+.|||||.+. ...|+.++||||||++++||+||+.||.+
T Consensus 226 -De~GniKlCDFGIsGrlvdSkAh--------trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~ 296 (391)
T KOG0983|consen 226 -DERGNIKLCDFGISGRLVDSKAH--------TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKG 296 (391)
T ss_pred -ccCCCEEeecccccceeeccccc--------ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCC
Confidence 69999999999999887765442 3557889999999876 34599999999999999999999999998
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCCCccccc
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 316 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~dw 316 (449)
.+. ..+.+.++++. .+ |.-....++++.|.+++..||..|+.+||.|.+|.+ +.++...+....+.-+|
T Consensus 297 c~t--dFe~ltkvln~-eP-P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~--h~Fi~~ye~a~~dVa~W 365 (391)
T KOG0983|consen 297 CKT--DFEVLTKVLNE-EP-PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE--HPFIKRYETAEVDVASW 365 (391)
T ss_pred CCc--cHHHHHHHHhc-CC-CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc--CcceeecchhhccHHHH
Confidence 543 23455555552 22 221122347899999999999999999999998755 34433333333444555
No 322
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.1e-35 Score=279.43 Aligned_cols=245 Identities=24% Similarity=0.360 Sum_probs=195.1
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-------CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-------KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+|+..+.||+|+||.||+|.+..+++.|++|++.... ....+.+|+++++.++|++++...
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~------------ 68 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYL------------ 68 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchhee------------
Confidence 6889999999999999999998889999999876432 223577899999999888755443
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
.+...+...++++||+ +++|.+++.. ...++...++.++.||+.||.|||+.|++|+||+|+|
T Consensus 69 ---------------~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~n 132 (258)
T cd06632 69 ---------------GTEREEDNLYIFLELVPGGSLAKLLKK-YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGAN 132 (258)
T ss_pred ---------------eeEecCCeEEEEEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence 3345667889999999 7899988875 3468999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~p 238 (449)
|++. .++.+||+|||++........ .....++..|++||.+.... ++.++|+|||||++|+|++|..|
T Consensus 133 i~~~---~~~~~kl~d~~~~~~~~~~~~--------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~p 201 (258)
T cd06632 133 ILVD---TNGVVKLADFGMAKQVVEFSF--------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPP 201 (258)
T ss_pred EEEC---CCCCEEEccCccceecccccc--------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 9994 788999999999876543321 23556889999999988766 89999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
|...... .....+.... .........++.+.+++.+||..+|.+||+++++..
T Consensus 202 f~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 202 WSQLEGV---AAVFKIGRSK---ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred cccCcHH---HHHHHHHhcc---cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 9765422 2222221111 111223445788999999999999999999887743
No 323
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.4e-35 Score=283.09 Aligned_cols=249 Identities=21% Similarity=0.261 Sum_probs=193.6
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
|++.++||.|++|+||+|.+..++..||+|++..... ...+.+|+++++.++|++++..+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~---------------- 64 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLL---------------- 64 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHh----------------
Confidence 6889999999999999999998999999998764421 23577899999999988755433
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
.++..++..|+++||++++|.+++.... ..+++..++.++.|++.||+|||+++++||||+|+||+++
T Consensus 65 -----------~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~ 133 (283)
T cd07835 65 -----------DVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID 133 (283)
T ss_pred -----------heeccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc
Confidence 3345668899999999889998887543 3689999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+++.++|+|||++........ ......++..|+|||++.+. .++.++||||||+++|+|++|.+||.+.
T Consensus 134 ---~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 203 (283)
T cd07835 134 ---REGALKLADFGLARAFGVPVR-------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD 203 (283)
T ss_pred ---CCCcEEEeecccccccCCCcc-------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 688999999999975432211 11233568899999988764 4789999999999999999999999875
Q ss_pred hhhcHHHHHHHHHHhh------------------------cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKK------------------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~------------------------~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
....... .+.... ............+..+.+++.+||+.+|.+||+++++..
T Consensus 204 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 204 SEIDQLF---RIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred CHHHHHH---HHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 4432111 111110 011122233456788999999999999999999887743
No 324
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5e-36 Score=281.94 Aligned_cols=239 Identities=18% Similarity=0.246 Sum_probs=183.7
Q ss_pred eeecccCceeEEEEEEcCCC----------ceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 13 RKIGSGSFGEIFLASHVDTN----------EIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~----------~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
+.||+|+||.||+|.+..++ ..|++|+...... ...+.+|+.+++.++|++++..++.
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~----------- 69 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGV----------- 69 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeE-----------
Confidence 47899999999999997766 3588888765443 4568889999999998876655432
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+.. ...++||||+ +++|.+++......++...++.++.||+.||+|||++||+||||||+||
T Consensus 70 ----------------~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Ni 132 (259)
T cd05037 70 ----------------CVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNI 132 (259)
T ss_pred ----------------Eec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceE
Confidence 223 5568999999 8899988876555799999999999999999999999999999999999
Q ss_pred EeecCC----CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC--CCCccchHHHHHHHHHHHHh
Q 013125 161 LMGLGR----KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI--EQSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 161 ll~~~~----~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~DvwSlG~il~el~~ 234 (449)
|++... ....++|+|||++...... ....++..|+|||++.+. .++.++|||||||++|||++
T Consensus 133 ll~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~ 201 (259)
T cd05037 133 LVARYGLNEGYVPFIKLSDPGIPITVLSR-----------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICS 201 (259)
T ss_pred EEecCccccCCceeEEeCCCCcccccccc-----------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHh
Confidence 996221 1127999999999765431 234566789999999876 78999999999999999999
Q ss_pred -CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 235 -GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 235 -G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
|..||...........+ ......+.+ ....+.+++..||..+|.+||++.++.+.|
T Consensus 202 ~~~~p~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 202 NGEEPLSTLSSSEKERFY----QDQHRLPMP-----DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCCCCcccCCchhHHHHH----hcCCCCCCC-----CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 68888775432222111 111111111 126899999999999999999999887654
No 325
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.7e-37 Score=298.75 Aligned_cols=245 Identities=25% Similarity=0.357 Sum_probs=206.3
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCch----hHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----QLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
-+.|.+.++||+|.|+.|.+|++..++..||||++++..... .+.+|+++|+.|+|+++++++.+.
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~---------- 124 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI---------- 124 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee----------
Confidence 467999999999999999999999999999999988764332 368999999999999988776543
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
......|+||||+ ++.+.+++...++. ....+..+..|++.+++|||+++|+|||||++||
T Consensus 125 -----------------~t~~~lylV~eya~~ge~~~yl~~~gr~-~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNi 186 (596)
T KOG0586|consen 125 -----------------ETEATLYLVMEYASGGELFDYLVKHGRM-KEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENI 186 (596)
T ss_pred -----------------eecceeEEEEEeccCchhHHHHHhcccc-hhhhhhhhhHHHHHHHHHHhhcceeccccchhhc
Confidence 4567889999999 99999999885554 4499999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCC-CccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlG~il~el~~G~~pf 239 (449)
|+ +.+..+||+|||++..+..... ..+.+|++.|.|||++.+..| ++.+|+||+|+++|-|+.|.+||
T Consensus 187 lL---~~~mnikIaDfgfS~~~~~~~~--------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPF 255 (596)
T KOG0586|consen 187 LL---DENMNIKIADFGFSTFFDYGLM--------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPF 255 (596)
T ss_pred cc---ccccceeeeccccceeeccccc--------ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeeccccc
Confidence 99 4778899999999998875433 358899999999999999986 78999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.|..-. ..-.+++..++.+|... ..+..++|..++.++|.+|++.++|..
T Consensus 256 DG~~lk---~Lr~rvl~gk~rIp~~m-----s~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 256 DGQNLK---ELRPRVLRGKYRIPFYM-----SCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred CCcccc---cccchheeeeeccccee-----echhHHHHHHhhccCccccCCHHHhhh
Confidence 975432 22233445555555433 457889999999999999999888755
No 326
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.5e-35 Score=278.26 Aligned_cols=247 Identities=25% Similarity=0.393 Sum_probs=194.9
Q ss_pred eEEeeeecccCceeEEEEEEcCCC----ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTN----EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~----~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
+++.+.||.|+||.||+|.+...+ ..||+|++..... ...+..|+.+++.+.|++++..+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~------------ 68 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLG------------ 68 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEE------------
Confidence 467899999999999999998766 8899999876543 346788999999998876554433
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRK-FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~-~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
+....+..+++||++ +++|.+++...... +++..+..++.||+.||.|||+.|++||||||+|
T Consensus 69 ---------------~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~n 133 (258)
T smart00219 69 ---------------VCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARN 133 (258)
T ss_pred ---------------EEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccce
Confidence 334557889999999 88999998754434 9999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLP 238 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~p 238 (449)
|++ ++++.++|+|||++.......... .....++..|++||.+.+..++.++|||||||++|+|++ |.+|
T Consensus 134 il~---~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p 204 (258)
T smart00219 134 CLV---GENLVVKISDFGLSRDLYDDDYYK------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESP 204 (258)
T ss_pred EEE---ccCCeEEEcccCCceecccccccc------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCC
Confidence 999 477899999999998765442211 112236789999999988889999999999999999998 8899
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRL 298 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~ 298 (449)
|...... .....+..... .+ .....+.++.+++.+||..+|++||++.++.+.
T Consensus 205 ~~~~~~~---~~~~~~~~~~~-~~---~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 205 YPGMSNE---EVLEYLKKGYR-LP---KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCCCCHH---HHHHHHhcCCC-CC---CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 9874432 22222222221 11 113358899999999999999999999988664
No 327
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.6e-36 Score=284.33 Aligned_cols=245 Identities=21% Similarity=0.314 Sum_probs=193.0
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHc---CCCcceeeEeecchhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQ---GGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~---~~~~~~~~~~~~~~~~~~~~~ 81 (449)
.|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++ |++++.
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~--------------- 66 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITK--------------- 66 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeee---------------
Confidence 58899999999999999999999999999998765322 345778999999987 554433
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+..+...+...|+||||+ +++|.+++.. ..+++..++.++.|++.||.|||+.||+|+||+|+||
T Consensus 67 ------------~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni 132 (277)
T cd06917 67 ------------YYGSYLKGPRLWIIMEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANI 132 (277)
T ss_pred ------------EeeeeeeCCEEEEEEecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHE
Confidence 333345667889999999 8899988764 4789999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+++ +.+.++|+|||++......... .....|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||
T Consensus 133 ~i~---~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~ 202 (277)
T cd06917 133 LVT---NTGNVKLCDFGVAALLNQNSSK-------RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPY 202 (277)
T ss_pred EEc---CCCCEEEccCCceeecCCCccc-------cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCC
Confidence 994 6889999999999876544321 234568899999998875 45789999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.+..... ....+ ... .+........+.++.+++..||..+|++||++.++..
T Consensus 203 ~~~~~~~---~~~~~-~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 203 SDVDAFR---AMMLI-PKS--KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCChhh---hhhcc-ccC--CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 8654321 11111 111 1111111236789999999999999999999988855
No 328
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.2e-35 Score=289.80 Aligned_cols=254 Identities=21% Similarity=0.289 Sum_probs=195.7
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+|+++++.++|++++..........
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 87 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL----- 87 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc-----
Confidence 57899999999999999999999999999999998754322 234778999999999998776654322110
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
........|+|||+++++|.+++. ...+++..++.++.||+.||+|||+.||+||||||+||
T Consensus 88 ----------------~~~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Ni 149 (343)
T cd07880 88 ----------------SLDRFHDFYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNL 149 (343)
T ss_pred ----------------cccccceEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 001123568999999999988876 35799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+++ ..+.++|+|||++....... ....++..|++||++.+ ..++.++|+|||||++|+|++|..||
T Consensus 150 ll~---~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf 216 (343)
T cd07880 150 AVN---EDCELKILDFGLARQTDSEM----------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLF 216 (343)
T ss_pred EEc---CCCCEEEeecccccccccCc----------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 994 67889999999987543221 24467889999999876 45889999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCC--------------------------CHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 240 QGLKAATKKQKYDKICEKKVST--------------------------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~--------------------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
.+..... .+..++...... .........++.+.+++..|+..||.+||++.
T Consensus 217 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~ 293 (343)
T cd07880 217 KGHDHLD---QLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAA 293 (343)
T ss_pred CCCCHHH---HHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHH
Confidence 8654322 122211111110 11222345677899999999999999999988
Q ss_pred HHHH
Q 013125 294 FLKR 297 (449)
Q Consensus 294 ~l~~ 297 (449)
++..
T Consensus 294 ~~l~ 297 (343)
T cd07880 294 EALA 297 (343)
T ss_pred HHhc
Confidence 7753
No 329
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=9.7e-36 Score=286.23 Aligned_cols=260 Identities=21% Similarity=0.337 Sum_probs=196.4
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHc-CCCcceeeEeecchhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~ 79 (449)
+..+.|++.+.||+|+||+||+|.+..+++.||||+++.... ...+..|+.++..+. |++
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~---------------- 75 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPY---------------- 75 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCc----------------
Confidence 345789999999999999999999988899999999875432 223555666555544 454
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~ 158 (449)
++.+..++......|+|||++++++.+++......+++..+..++.||+.||.|||+ .||+||||+|+
T Consensus 76 -----------i~~~~~~~~~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~ 144 (296)
T cd06618 76 -----------IVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPS 144 (296)
T ss_pred -----------hHhhheeeecCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHH
Confidence 334444456677899999999889988887766789999999999999999999997 69999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC----CCccchHHHHHHHHHHHHh
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE----QSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~~DvwSlG~il~el~~ 234 (449)
||++ ++++.++|+|||++......... ....++..|+|||.+.+.. ++.++||||||+++|+|++
T Consensus 145 nill---~~~~~~kL~dfg~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~ 213 (296)
T cd06618 145 NILL---DASGNVKLCDFGISGRLVDSKAK--------TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELAT 213 (296)
T ss_pred HEEE---cCCCCEEECccccchhccCCCcc--------cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHh
Confidence 9999 47889999999998765432221 1235678899999987654 7889999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcC
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 307 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 307 (449)
|+.||...... .+.+..+........ + ....++.++.+++.+||..+|.+||+++++.+ ..++....
T Consensus 214 g~~p~~~~~~~--~~~~~~~~~~~~~~~-~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~--~~~~~~~~ 280 (296)
T cd06618 214 GQFPYKNCKTE--FEVLTKILQEEPPSL-P-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ--HPFIRRYE 280 (296)
T ss_pred CCCCCCcchhH--HHHHHHHhcCCCCCC-C-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhc--Chhhhccc
Confidence 99999753221 222333322221111 1 11235789999999999999999999988854 34444333
No 330
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.4e-35 Score=289.69 Aligned_cols=255 Identities=21% Similarity=0.270 Sum_probs=194.6
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
.+.++|.+.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+.+++.++|++++..........
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~---- 89 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR---- 89 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc----
Confidence 356899999999999999999999998999999998864321 234678999999999998777654322110
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
........|+++++++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+|
T Consensus 90 -----------------~~~~~~~~~lv~~~~~~~L~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N 150 (345)
T cd07877 90 -----------------SLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN 150 (345)
T ss_pred -----------------cccccccEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHH
Confidence 011234578999999999988775 3469999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
|+++ +++.++|+|||+++..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 151 Ill~---~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~p 217 (345)
T cd07877 151 LAVN---EDCELKILDFGLARHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 217 (345)
T ss_pred EEEc---CCCCEEEeccccccccccc----------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9994 7789999999998754322 124567889999999876 4688999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCC--------------------------CHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 239 WQGLKAATKKQKYDKICEKKVST--------------------------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~--------------------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
|.+..... .+..+....... .........++++.+++..|+..+|.+||+.
T Consensus 218 f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~ 294 (345)
T cd07877 218 FPGTDHID---QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 294 (345)
T ss_pred CCCCCHHH---HHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCH
Confidence 97644322 112221111110 0111112346778899999999999999998
Q ss_pred HHHHH
Q 013125 293 GFLKR 297 (449)
Q Consensus 293 ~~l~~ 297 (449)
.++.+
T Consensus 295 ~e~l~ 299 (345)
T cd07877 295 AQALA 299 (345)
T ss_pred HHHhc
Confidence 87744
No 331
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.3e-35 Score=282.87 Aligned_cols=252 Identities=23% Similarity=0.288 Sum_probs=197.2
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
|++.+.||.|++|.||+|.+..+++.||+|.+..... ...+.+|+++++.++|++++....
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~--------------- 65 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD--------------- 65 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHH---------------
Confidence 6788999999999999999998999999998765432 235778999999998876554332
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~ 164 (449)
+...++..++|+||+.++|.+++......+++..++.++.||+.||.|||+.||+|+||||+||++.
T Consensus 66 ------------~~~~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~- 132 (283)
T cd05118 66 ------------VFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN- 132 (283)
T ss_pred ------------hhccCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC-
Confidence 2345578899999998899998887667899999999999999999999999999999999999994
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCCCh
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLK 243 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~~~ 243 (449)
+++.++|+|||.+........ ......++..|++||.+.+. .++.++|+||||+++|+|++|+.||.+..
T Consensus 133 --~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~ 203 (283)
T cd05118 133 --TEGVLKLADFGLARSFGSPVR-------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS 203 (283)
T ss_pred --CCCcEEEeeeeeeEecCCCcc-------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 778999999999987654331 11234578899999998876 68999999999999999999999997755
Q ss_pred hhcHHHHHHHHHHh----------------------hcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 244 AATKKQKYDKICEK----------------------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 244 ~~~~~~~~~~i~~~----------------------~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..+........... .............+.++.+++..||..+|.+||++.++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 204 EIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 43221111111000 0111122333456789999999999999999999887743
No 332
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.8e-35 Score=287.78 Aligned_cols=260 Identities=19% Similarity=0.257 Sum_probs=194.3
Q ss_pred ceEEeeeecccCceeEEEEEEcCC--CceEEEEEecCCCC----chhHHHHHHHHHHHc-CCCcceeeEeecchhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDT--NEIVAVKIENSGTK----HPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~--~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~ 80 (449)
+|++.+.||+|+||.||+|.+..+ +..||+|.+..... ...+.+|+.+++.+. |++++..+.....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------- 73 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIV------- 73 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeee-------
Confidence 689999999999999999999877 88999998764321 335678999999884 7776665442210
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+.......|+++++++++|.+.+.. ...++...++.++.||+.||+|||++||+||||||+||
T Consensus 74 ----------------~~~~~~~~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Ni 136 (332)
T cd07857 74 ----------------FPGNFNELYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNL 136 (332)
T ss_pred ----------------ccccCCcEEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHe
Confidence 1123356789999999999988864 56799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
|+ ++++.++|+|||+++.......... .......||..|+|||++.+ ..++.++|||||||++|+|++|.+||
T Consensus 137 li---~~~~~~kl~Dfg~a~~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf 210 (332)
T cd07857 137 LV---NADCELKICDFGLARGFSENPGENA---GFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVF 210 (332)
T ss_pred EE---cCCCCEEeCcCCCceeccccccccc---ccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCC
Confidence 99 4778999999999987654322110 11234578999999998766 46899999999999999999999999
Q ss_pred CCChhhcHHHHHHH------------HH-----------HhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 240 QGLKAATKKQKYDK------------IC-----------EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 240 ~~~~~~~~~~~~~~------------i~-----------~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
.+............ +. ......+........+..+.+++..||..+|.+||++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 211 KGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 76442211111100 00 00011122233344577899999999999999999988774
Q ss_pred H
Q 013125 297 R 297 (449)
Q Consensus 297 ~ 297 (449)
.
T Consensus 291 ~ 291 (332)
T cd07857 291 E 291 (332)
T ss_pred c
Confidence 3
No 333
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.6e-35 Score=280.43 Aligned_cols=255 Identities=21% Similarity=0.257 Sum_probs=191.1
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc----hhHHHHHHHHHHHc---CCCcceeeEeecchhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQ---GGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~----~~~~~E~~~l~~l~---~~~~~~~~~~~~~~~~~~~~~ 81 (449)
|++.+.||.|+||.||+|++..+++.||+|++...... ..+.+|+.+++.++ |++++..++......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~------ 74 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPR------ 74 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeecc------
Confidence 78999999999999999999888999999998743222 23567888887774 665554443321110
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.......+++||++.++|.+++.... ..+++..++.++.|++.||.|||+.|++|+||+|+||
T Consensus 75 ----------------~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~ni 138 (287)
T cd07838 75 ----------------TDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNI 138 (287)
T ss_pred ----------------CCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhE
Confidence 00122489999999889998887643 3689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
++. +++.++|+|||++........ .....++..|+|||++.+..++.++|||||||++|||++|.+||.
T Consensus 139 li~---~~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~ 207 (287)
T cd07838 139 LVT---SDGQVKIADFGLARIYSFEMA--------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR 207 (287)
T ss_pred EEc---cCCCEEEeccCcceeccCCcc--------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCccc
Confidence 994 678999999999987644322 123357889999999999999999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHH-------------------hhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 241 GLKAATKKQKYDKICE-------------------KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~-------------------~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
+.........+..... .....+........+..+.+++..||..||.+||++.++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 208 GTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred CCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 7654332222211100 0001111222234467889999999999999999988774
No 334
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.7e-35 Score=289.62 Aligned_cols=263 Identities=21% Similarity=0.276 Sum_probs=198.0
Q ss_pred CCcccCCceEE-eeeecccCceeEEEEEEcCCCceEEEEEecCCCCc----------------hhHHHHHHHHHHHcCCC
Q 013125 1 MERIIGVKYKL-GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----------------PQLLYEAKVYKILQGGS 63 (449)
Q Consensus 1 ~~~i~~~~y~i-~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~----------------~~~~~E~~~l~~l~~~~ 63 (449)
|..-+.+||.. .+.||.|+||+||+|.+..+++.||||++...... ..+.+|+++++.++|++
T Consensus 2 ~~~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 81 (335)
T PTZ00024 2 MSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHEN 81 (335)
T ss_pred CccccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcc
Confidence 44556788975 57799999999999999989999999987643221 14678999999999887
Q ss_pred cceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 013125 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIE 143 (449)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~ 143 (449)
++..+ .++..++..|+|||++.++|.+++.. ...++...+..++.|++.||+
T Consensus 82 iv~~~---------------------------~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~ 133 (335)
T PTZ00024 82 IMGLV---------------------------DVYVEGDFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLN 133 (335)
T ss_pred eeeee---------------------------EEEecCCcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Confidence 55443 33456678999999998899988864 556999999999999999999
Q ss_pred HHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCcccc-------ccCCCCCCCCccccccccccCCC-
Q 013125 144 YVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP-------YRENKNLTGTARYASCNTHLGIE- 215 (449)
Q Consensus 144 ~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~- 215 (449)
|||++||+||||+|+||++ +..+.++|+|||++............. ........++..|++||.+.+..
T Consensus 134 ~LH~~~i~H~dl~~~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 210 (335)
T PTZ00024 134 VLHKWYFMHRDLSPANIFI---NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEK 210 (335)
T ss_pred HHHhCCeecccccHHHeEE---CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCC
Confidence 9999999999999999999 477899999999998765221110000 00112335688899999987654
Q ss_pred CCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCC-----------------------CHHHhhccChH
Q 013125 216 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST-----------------------PIEVLCKSHPA 272 (449)
Q Consensus 216 ~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~-----------------------~~~~~~~~~~~ 272 (449)
++.++|||||||++|||++|.+||.+...... +..+....... .........+.
T Consensus 211 ~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (335)
T PTZ00024 211 YHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ---LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASD 287 (335)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCCh
Confidence 68999999999999999999999987654322 22222211100 01112234577
Q ss_pred HHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 273 EFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 273 ~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
++.+++..||..+|++||+++++..
T Consensus 288 ~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 288 DAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHHcCCCchhccCHHHHhc
Confidence 8999999999999999999887744
No 335
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.1e-35 Score=279.08 Aligned_cols=250 Identities=23% Similarity=0.328 Sum_probs=194.3
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-------CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-------KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
.+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+|+++++.++|++++..++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~------- 74 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLR------- 74 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEE-------
Confidence 57999999999999999999999999999999864321 1124678999999999988665543221
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
.......++|+|++ +++|.+.+.. ...++...++.++.|++.||.|||++|++|+||||+
T Consensus 75 ------------------~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ 135 (264)
T cd06653 75 ------------------DPEEKKLSIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGA 135 (264)
T ss_pred ------------------cCCCCEEEEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHH
Confidence 12345678999999 8899988865 345889999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
||++ +.++.++|+|||+++......... .......++..|+|||++.+..++.++|+|||||++|+|++|+.|
T Consensus 136 ni~i---~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 208 (264)
T cd06653 136 NILR---DSAGNVKLGDFGASKRIQTICMSG----TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPP 208 (264)
T ss_pred HEEE---cCCCCEEECccccccccccccccC----ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence 9999 467889999999998654321110 011245688999999999998899999999999999999999999
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
|...... ..+..+. .....+......++.+.+++.+||. ++..||+..++.
T Consensus 209 ~~~~~~~---~~~~~~~---~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~ 259 (264)
T cd06653 209 WAEYEAM---AAIFKIA---TQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLL 259 (264)
T ss_pred CCccCHH---HHHHHHH---cCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHh
Confidence 9865322 2222221 1222233445667899999999998 579999988664
No 336
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.9e-35 Score=281.61 Aligned_cols=241 Identities=24% Similarity=0.289 Sum_probs=181.4
Q ss_pred eecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccC
Q 013125 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTL 88 (449)
Q Consensus 14 ~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (449)
.||+|+||.||+|.+..+++.||+|++..... ......|..+++.+++.. +
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~ 56 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD------------------------C 56 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCC------------------------C
Confidence 48999999999999999999999998764321 112344544444443211 1
Q ss_pred CCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCC
Q 013125 89 GGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 167 (449)
Q Consensus 89 ~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~ 167 (449)
+++..+..+....+..|+||||+ |++|.+++.. ...+++..++.++.|++.||+|||+.+|+||||||+||++ +.
T Consensus 57 ~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili---~~ 132 (278)
T cd05606 57 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DE 132 (278)
T ss_pred CcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE---CC
Confidence 23444555556678899999999 8899887764 4579999999999999999999999999999999999999 47
Q ss_pred CCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCCChhhc
Q 013125 168 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246 (449)
Q Consensus 168 ~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~ 246 (449)
++.++|+|||++....... .....|+..|+|||++.+. .++.++||||+||++|||++|..||.+.....
T Consensus 133 ~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~ 203 (278)
T cd05606 133 HGHVRISDLGLACDFSKKK---------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 203 (278)
T ss_pred CCCEEEccCcCccccCccC---------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc
Confidence 7899999999987553321 1245789999999998754 68999999999999999999999998753322
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCC-----CHHHHH
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP-----DYGFLK 296 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp-----~~~~l~ 296 (449)
.......+.... ..+....+.++.+++..|+..+|.+|| ++.++.
T Consensus 204 ~~~~~~~~~~~~-----~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 253 (278)
T cd05606 204 KHEIDRMTLTMA-----VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 253 (278)
T ss_pred hHHHHHHhhccC-----CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHH
Confidence 222211111111 112234578999999999999999999 766664
No 337
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.4e-35 Score=289.43 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=193.2
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+.++|.+.+.||+|+||.||+|.+..+++.||||++..... ...+.+|+++++.++|++++..........
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 87 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAV----- 87 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccc-----
Confidence 45799999999999999999999988999999998764321 234778999999999998776554322110
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
........|+|+|++..+|..++ ...++...+..++.|++.||+|||+.|++||||||+||
T Consensus 88 ----------------~~~~~~~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NI 148 (342)
T cd07879 88 ----------------SGDEFQDFYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNL 148 (342)
T ss_pred ----------------cCCCCceEEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence 01223456899999987776654 45689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
++. .++.++|+|||+++..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 149 ll~---~~~~~kL~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf 215 (342)
T cd07879 149 AVN---EDCELKILDFGLARHADAE----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLF 215 (342)
T ss_pred EEC---CCCCEEEeeCCCCcCCCCC----------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCC
Confidence 994 7889999999998754321 124567889999999876 45899999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhc--------------------------CCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 240 QGLKAATKKQKYDKICEKKV--------------------------STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~--------------------------~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
.+...... +..+..... ...........+..+.+++..||..||.+||++.
T Consensus 216 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~ 292 (342)
T cd07879 216 KGKDYLDQ---LTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTAT 292 (342)
T ss_pred CCCCHHHH---HHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 87543221 111111000 0011112234567899999999999999999998
Q ss_pred HHHH
Q 013125 294 FLKR 297 (449)
Q Consensus 294 ~l~~ 297 (449)
++..
T Consensus 293 e~l~ 296 (342)
T cd07879 293 EALE 296 (342)
T ss_pred HHhc
Confidence 8754
No 338
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.1e-35 Score=278.45 Aligned_cols=248 Identities=21% Similarity=0.265 Sum_probs=190.0
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
+.....||+|+||.||+|.+..++..||+|.+..... ...+.+|+++++.++|++++..++
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~----------------- 72 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLG----------------- 72 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeee-----------------
Confidence 3445689999999999999988999999998765432 335788999999999887665433
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKF--SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~--~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
+...++..++|+|++ +++|.+++......+ +...++.++.||+.||.|||++||+||||||+||+++
T Consensus 73 ----------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~ 142 (268)
T cd06624 73 ----------SDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN 142 (268)
T ss_pred ----------eeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc
Confidence 334567889999999 889999887644445 8888999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC--CCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE--QSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
.+.+.++|+|||++......... .....++..|+|||++.+.. ++.++||||||+++|+|++|..||..
T Consensus 143 --~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 143 --TYSGVVKISDFGTSKRLAGINPC-------TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred --CCCCeEEEecchhheecccCCCc-------cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 23678999999998765432211 12346788999999987644 78899999999999999999999976
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
...... ....+...... ..+....++++.+++..||..+|.+||++.++..
T Consensus 214 ~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 214 LGEPQA--AMFKVGMFKIH---PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ccChhh--hHhhhhhhccC---CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 432211 11111100111 1122445789999999999999999999988754
No 339
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.5e-35 Score=289.30 Aligned_cols=257 Identities=21% Similarity=0.261 Sum_probs=198.6
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
||++.++||.|+||.||+|++..+++.||||++.... ....+.+|+.+++.++|++++...+......
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------- 72 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPS-------- 72 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccC--------
Confidence 6999999999999999999998889999999876532 2346888999999999887665443221100
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
.......|+|||+++++|.+++.. ...+++..++.++.||+.||+|||+.||+||||||+|||+.
T Consensus 73 --------------~~~~~~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~ 137 (330)
T cd07834 73 --------------PEDFNDVYIVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN 137 (330)
T ss_pred --------------cccccceEEEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence 012246799999998888888764 44799999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
.++.++|+|||++.......... .......++..|+|||++.+. .++.++|||||||++|+|++|.+||.+.
T Consensus 138 ---~~~~~~L~dfg~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~ 210 (330)
T cd07834 138 ---SNCDLKICDFGLARGVDPDEDEK----GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGR 210 (330)
T ss_pred ---CCCCEEEcccCceEeeccccccc----ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCC
Confidence 67899999999998765543110 012345678899999999888 7899999999999999999999999876
Q ss_pred hhhcHHHHHHHHHHhhcCC--------------------------CHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 243 KAATKKQKYDKICEKKVST--------------------------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~--------------------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
..... +..+....... +........+.++.+++..||..+|.+||+++++.
T Consensus 211 ~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll 287 (330)
T cd07834 211 DYIDQ---LNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEAL 287 (330)
T ss_pred CHHHH---HHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 54322 22222211111 11112234578899999999999999999988875
Q ss_pred H
Q 013125 297 R 297 (449)
Q Consensus 297 ~ 297 (449)
.
T Consensus 288 ~ 288 (330)
T cd07834 288 A 288 (330)
T ss_pred h
Confidence 4
No 340
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=7.6e-36 Score=283.82 Aligned_cols=239 Identities=17% Similarity=0.224 Sum_probs=179.7
Q ss_pred eecccCceeEEEEEEcCC------------------------CceEEEEEecCCCC--chhHHHHHHHHHHHcCCCccee
Q 013125 14 KIGSGSFGEIFLASHVDT------------------------NEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRL 67 (449)
Q Consensus 14 ~LG~G~fg~Vy~a~~~~~------------------------~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~ 67 (449)
.||+|+||.||+|....+ ...||+|++..... ...+..|+.+++.++|+++++.
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 699999999999975321 13588998764322 2246778888888888875554
Q ss_pred eEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 013125 68 VVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVH 146 (449)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH 146 (449)
+ .++......++||||+ +++|..++......+++..++.++.||+.||+|||
T Consensus 82 ~---------------------------~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH 134 (274)
T cd05076 82 H---------------------------GVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE 134 (274)
T ss_pred E---------------------------EEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4 4445667889999999 88888887665667999999999999999999999
Q ss_pred hCCccccCCCCCcEEeecC----CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccch
Q 013125 147 SRGFLHRDIKPDNFLMGLG----RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDD 221 (449)
Q Consensus 147 ~~giiHrDLkp~Nill~~~----~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~D 221 (449)
++||+||||||+|||++.. .....++++|||++...... ....++..|+|||.+.+ ..++.++|
T Consensus 135 ~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~D 203 (274)
T cd05076 135 DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAAD 203 (274)
T ss_pred cCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHH
Confidence 9999999999999999531 12235899999988643221 12356788999998875 56899999
Q ss_pred HHHHHHHHHHHH-hCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 222 LESLGYVLLYFL-RGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 222 vwSlG~il~el~-~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
||||||++|||+ +|..||.+........ ........+ ...++.+.+++..||..+|++||++.+|.+.|
T Consensus 204 v~slG~~l~el~~~g~~p~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 204 KWSFGTTLLEICFDGEVPLKERTPSEKER----FYEKKHRLP-----EPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHHHHHHHHhCCCCCccccChHHHHH----HHHhccCCC-----CCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 999999999995 6999998754432211 122222222 12246799999999999999999999887654
No 341
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=273.91 Aligned_cols=255 Identities=17% Similarity=0.199 Sum_probs=201.5
Q ss_pred CCceEEe-eeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhh
Q 013125 6 GVKYKLG-RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 6 ~~~y~i~-~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
-+.|+|- ++||-|-.|.|-.+.++.|++++|+|++. +.+...+|+++--.. .|++++..+.+...
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~---Ds~KARrEVeLHw~~s~h~~iV~IidVyeN---------- 126 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL---DSPKARREVELHWMASGHPHIVSIIDVYEN---------- 126 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHh---cCHHHHhHhhhhhhhcCCCceEEeehhhhh----------
Confidence 3566664 57999999999999999999999999975 334567787765433 45554443322111
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
...+.....+|||.+ ||.|..-++..+ ..|++.++..|+.||..|+.|||+.+|.||||||+|+|
T Consensus 127 -------------s~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLL 193 (400)
T KOG0604|consen 127 -------------SYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLL 193 (400)
T ss_pred -------------hccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhhee
Confidence 112346678999999 999999888654 46999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
.+....+..+||+|||+|+....... -.+-+-|+.|.|||++....|+..+|+||+|+++|.|++|.+||..
T Consensus 194 yt~t~~na~lKLtDfGFAK~t~~~~~--------L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS 265 (400)
T KOG0604|consen 194 YTTTSPNAPLKLTDFGFAKETQEPGD--------LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265 (400)
T ss_pred eecCCCCcceEecccccccccCCCcc--------ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccc
Confidence 98777788999999999987654322 1355779999999999999999999999999999999999999987
Q ss_pred Chhhc-HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 242 LKAAT-KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 242 ~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
..... ....-.+|....+.+|.++ |...++..+++++.+|..+|++|.+.+++
T Consensus 266 ~hg~aispgMk~rI~~gqy~FP~pE-Ws~VSe~aKdlIR~LLkt~PteRlTI~~~ 319 (400)
T KOG0604|consen 266 NHGLAISPGMKRRIRTGQYEFPEPE-WSCVSEAAKDLIRKLLKTEPTERLTIEEV 319 (400)
T ss_pred cCCccCChhHHhHhhccCccCCChh-HhHHHHHHHHHHHHHhcCCchhheeHHHh
Confidence 65432 2233455666677777544 55668889999999999999999987655
No 342
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.4e-35 Score=278.58 Aligned_cols=247 Identities=22% Similarity=0.288 Sum_probs=195.4
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.+.||.|+||.||+|.+..++..||+|.+... .....+.+|+++++.++|++++..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~--------------- 65 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFF--------------- 65 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhh---------------
Confidence 699999999999999999999999999999987643 2334678899999999988755433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
.........++|+||+ +++|.+++... ...+++..++.++.|++.||.|||+.+++|+||||+||+
T Consensus 66 ------------~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil 133 (257)
T cd08225 66 ------------ASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIF 133 (257)
T ss_pred ------------heeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEE
Confidence 2334567889999999 88999988653 335899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
++ ++...++|+|||.+......... .....|+..|+|||++.+..++.++|+||||+++|||++|..||..
T Consensus 134 ~~--~~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 204 (257)
T cd08225 134 LS--KNGMVAKLGDFGIARQLNDSMEL-------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEG 204 (257)
T ss_pred Ec--CCCCeEEecccccchhccCCccc-------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 95 23346799999998765433211 1234688899999999888899999999999999999999999976
Q ss_pred ChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.... .....+...... ......+.++.+++.+||..+|++||++.++..
T Consensus 205 ~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 205 NNLH---QLVLKICQGYFA----PISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ccHH---HHHHHHhcccCC----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 4332 222222222211 122345789999999999999999999988754
No 343
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7e-36 Score=287.44 Aligned_cols=246 Identities=20% Similarity=0.313 Sum_probs=193.8
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
-|....+||+|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.+.|++++..+.
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~---------------- 85 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYK---------------- 85 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhh----------------
Confidence 3555678999999999999998889999999876432 2345778999999888887554432
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~ 164 (449)
++..++..|+|+||+ +++|..++. ...+++..++.++.|++.||.|||+.|++||||||+||++
T Consensus 86 -----------~~~~~~~~~iv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill-- 150 (297)
T cd06659 86 -----------SYLVGEELWVLMEFLQGGALTDIVS--QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL-- 150 (297)
T ss_pred -----------heeeCCeEEEEEecCCCCCHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE--
Confidence 234567889999999 788888765 3568999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChh
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA 244 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~ 244 (449)
+.++.++|+|||++........ ......++..|+|||++.+..++.++|||||||++|||++|..||.....
T Consensus 151 -~~~~~~kL~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 222 (297)
T cd06659 151 -TLDGRVKLSDFGFCAQISKDVP-------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP 222 (297)
T ss_pred -ccCCcEEEeechhHhhcccccc-------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 4788999999999875443221 12345788999999999988899999999999999999999999986443
Q ss_pred hcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
. ..+..+... ..+........+..+.+++..||..+|.+||+++++.+
T Consensus 223 ~---~~~~~~~~~--~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 223 V---QAMKRLRDS--PPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred H---HHHHHHhcc--CCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 2 222222111 11112223456788999999999999999999988755
No 344
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.1e-35 Score=278.65 Aligned_cols=248 Identities=19% Similarity=0.275 Sum_probs=182.8
Q ss_pred eeecccCceeEEEEEEcCC--CceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 13 RKIGSGSFGEIFLASHVDT--NEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~--~~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
++||+|+||.||+|..... ...+++|...... ....+.+|+.+++.++|+++++.++.
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~----------------- 63 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQ----------------- 63 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEE-----------------
Confidence 3699999999999976432 3346677665432 23458889999999999886665543
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
+......|+||||+ +++|.+++... ...++...++.++.||+.||+|||+++++||||||+|||+
T Consensus 64 ----------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~- 132 (268)
T cd05086 64 ----------CVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL- 132 (268)
T ss_pred ----------ecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE-
Confidence 34456789999999 78999988753 2346777889999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-------CCCCccchHHHHHHHHHHHHh-C
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-------IEQSRRDDLESLGYVLLYFLR-G 235 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~s~~~DvwSlG~il~el~~-G 235 (449)
+.++.++|+|||++......... .......++..|+|||++.. ..++.++|||||||++|||++ |
T Consensus 133 --~~~~~~~l~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~ 205 (268)
T cd05086 133 --TSDLTVKVGDYGIGPSRYKEDYI-----ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENA 205 (268)
T ss_pred --cCCccEEecccccccccCcchhh-----hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCC
Confidence 47789999999998643221110 11234567889999998753 346789999999999999997 6
Q ss_pred CCCCCCChhhcHHHHHHHHH-HhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKIC-EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
..||....... .+..+. ......+.+......++.+.+++..|| .+|++||++++|.+.|
T Consensus 206 ~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 206 AQPYSHLSDRE---VLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CCCCCCCCHHH---HHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 78887654432 222222 222222233334456788999999999 6899999999987765
No 345
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.7e-35 Score=276.12 Aligned_cols=252 Identities=27% Similarity=0.422 Sum_probs=196.5
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
||++.+.||+|+||.||+|.+..+++.||+|++..... ...+..|+.+++.++|++++..++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~-------------- 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYG-------------- 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheee--------------
Confidence 69999999999999999999988999999999876533 235788999999998887555433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+....+..++|+||+ +++|.+++.. ...++...++.++.|++.||+|||+.||+|+||+|+||++
T Consensus 67 -------------~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~ 132 (264)
T cd06626 67 -------------VEVHREKVYIFMEYCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL 132 (264)
T ss_pred -------------eEecCCEEEEEEecCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 335567889999999 8899998875 4558899999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC---CCccchHHHHHHHHHHHHhCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE---QSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+ +.+.+||+|||++............ ......++..|++||++.+.. .+.++||||||+++|++++|..||
T Consensus 133 ~---~~~~~kl~d~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf 206 (264)
T cd06626 133 D---HNGVIKLGDFGCAVKLKNNTTTMGE---EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPW 206 (264)
T ss_pred C---CCCCEEEcccccccccCCCCCcccc---cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCc
Confidence 4 6889999999999876544321100 012456788999999998766 889999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
...... ......+.. ......+ .....+..+.+++..||..+|.+||++.++..
T Consensus 207 ~~~~~~--~~~~~~~~~-~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 207 SELDNE--FQIMFHVGA-GHKPPIP-DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred cCCcch--HHHHHHHhc-CCCCCCC-cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 765321 111112221 1111111 11234788999999999999999999887743
No 346
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8.9e-36 Score=286.15 Aligned_cols=248 Identities=23% Similarity=0.328 Sum_probs=194.9
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+|+.+++.++|++++...+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~-------------- 83 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLD-------------- 83 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhh--------------
Confidence 479999999999999999999998889999999875432 2345788999999998887554332
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+....+..|+|+||+ +++|.+++.. ..++...+..++.|++.||.|||++|++||||||+||++
T Consensus 84 -------------~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili 148 (293)
T cd06647 84 -------------SYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 148 (293)
T ss_pred -------------eeeeCCcEEEEEecCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE
Confidence 234567789999999 8899988763 458899999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
. .++.++|+|||++......... .....++..|++||.+.+..++.++|||||||++|++++|..||...
T Consensus 149 ~---~~~~~kL~dfg~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~ 218 (293)
T cd06647 149 G---MDGSVKLTDFGFCAQITPEQSK-------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE 218 (293)
T ss_pred c---CCCCEEEccCcceecccccccc-------cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 4 6789999999998755433221 13456888999999999888999999999999999999999999765
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.... .+..+... ..+........+..+.+++..||..+|++||++.++..
T Consensus 219 ~~~~---~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 219 NPLR---ALYLIATN--GTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred Chhh---heeehhcC--CCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 4321 11111111 11111112234678999999999999999999988744
No 347
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.6e-35 Score=280.51 Aligned_cols=245 Identities=21% Similarity=0.292 Sum_probs=195.4
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+-|++.++||.|+||.||+|.+..+++.||||+...... ...+.+|++++..++|++++..+.
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~-------------- 69 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-------------- 69 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEE--------------
Confidence 347889999999999999999988899999998764322 234778999999998887555433
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
+...+...|+||||+ +++|.+++. ...++...+..++.|++.+|.|||+.|++|+||+|+||++
T Consensus 70 -------------~~~~~~~~~lv~e~~~~~~l~~~i~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i 134 (277)
T cd06641 70 -------------SYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 134 (277)
T ss_pred -------------EEEeCCeEEEEEEeCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE
Confidence 345667889999999 778888875 3568999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+ .++.++|+|||++......... .....++..|++||.+.+..++.++|+|||||++|+|++|..||...
T Consensus 135 ~---~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 204 (277)
T cd06641 135 S---EHGEVKLADFGVAGQLTDTQIK-------RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSEL 204 (277)
T ss_pred C---CCCCEEEeecccceecccchhh-------hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCcc
Confidence 4 7788999999998765432211 13456788999999998888999999999999999999999999765
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... .....+... ..+......+.++.+++..||..+|.+||++.++..
T Consensus 205 ~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 205 HPM---KVLFLIPKN----NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred chH---HHHHHHhcC----CCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 432 122222111 111223445789999999999999999999998866
No 348
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.9e-35 Score=285.31 Aligned_cols=245 Identities=24% Similarity=0.339 Sum_probs=193.9
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
.+.|...++||+|+||+||+|++..+++.||+|++..... ...+.+|+++++.++|++++...
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~------------ 87 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK------------ 87 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEE------------
Confidence 3457888999999999999999999999999998764322 12467899999999888755443
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.++...+..|+||||+.+++.+++......++..+++.++.||+.+|.|||++|++||||+|+||
T Consensus 88 ---------------~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~ni 152 (313)
T cd06633 88 ---------------GCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNI 152 (313)
T ss_pred ---------------EEEEeCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhE
Confidence 33456678899999998899888877667799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc---CCCCCccchHHHHHHHHHHHHhCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
++. +++.++|+|||++..... .....|+..|+|||++. +..++.++|||||||++|||++|..
T Consensus 153 li~---~~~~~kL~dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~ 218 (313)
T cd06633 153 LLT---EPGQVKLADFGSASKSSP-----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 218 (313)
T ss_pred EEC---CCCCEEEeecCCCcccCC-----------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 994 778999999999853221 23457888999999984 3568889999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
||....... ....+..... .......++..+.+++..||+.+|.+||++.++..
T Consensus 219 p~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 219 PLFNMNAMS---ALYHIAQNDS---PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred CCCCCChHH---HHHHHHhcCC---CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 998754332 2222222111 11122345678999999999999999999887743
No 349
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.5e-35 Score=275.41 Aligned_cols=246 Identities=23% Similarity=0.320 Sum_probs=198.9
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|.+.+.||.|+||.||+|.+..+++.||+|++.... ....+..|+++++.++|++.+....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~-------------- 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYE-------------- 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEE--------------
Confidence 6999999999999999999999899999999887542 2345788999999999887554432
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
....+...++|+|++ +++|.+.+... ...++...++.++.|++.||.|||++|++|+||+|+|
T Consensus 67 -------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~n 133 (258)
T cd08215 67 -------------SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQN 133 (258)
T ss_pred -------------EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHH
Confidence 234457889999999 78999988764 3679999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
|+++ +++.++|+|||++........ ......|++.|++||.+.+..++.++|+||+|+++|+|++|..||
T Consensus 134 il~~---~~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~ 203 (258)
T cd08215 134 IFLT---SNGLVKLGDFGISKVLSSTVD-------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPF 203 (258)
T ss_pred eEEc---CCCcEEECCccceeecccCcc-------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCC
Confidence 9994 678999999999987654431 123456888999999999988999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
...... .....+..... ..+....+..+.+++..||..+|++||++.++.+
T Consensus 204 ~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 204 EGENLL---ELALKILKGQY----PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCcHH---HHHHHHhcCCC----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 765422 22222222221 1222356789999999999999999999988754
No 350
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-37 Score=294.91 Aligned_cols=241 Identities=21% Similarity=0.324 Sum_probs=198.2
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
.+.||+|-||+||-|++.++|+.||||++.+. ....++.+|+.||+.+.|+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPG------------------------ 624 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPG------------------------ 624 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCC------------------------
Confidence 46899999999999999999999999998754 23456889999999999884
Q ss_pred CCCcCeeEEecccCCeeEEEEecCCCCHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFV-YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~-~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
++.+...++..+..++|||-+.|+..+.+. ...+++++...+.++.||+.||.|||.++|+|+||||+|||+...+
T Consensus 625 ---iV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~ 701 (888)
T KOG4236|consen 625 ---IVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASAS 701 (888)
T ss_pred ---eeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCC
Confidence 555666677888999999999777666554 4467899999999999999999999999999999999999997665
Q ss_pred CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhc
Q 013125 167 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246 (449)
Q Consensus 167 ~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~ 246 (449)
.-.++||+|||+|+...+..- ..+++||+.|+|||+++...|++.-|+||.|+|+|--+.|-.||....+.
T Consensus 702 ~FPQvKlCDFGfARiIgEksF--------RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI- 772 (888)
T KOG4236|consen 702 PFPQVKLCDFGFARIIGEKSF--------RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI- 772 (888)
T ss_pred CCCceeeccccceeecchhhh--------hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch-
Confidence 667999999999998776542 25889999999999999999999999999999999999999999754322
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
-..|....+..| +.-|+.+.++..+||+..|+..-.+|-+.+
T Consensus 773 ----ndQIQNAaFMyP-p~PW~eis~~AidlIn~LLqVkm~kRysvd 814 (888)
T KOG4236|consen 773 ----NDQIQNAAFMYP-PNPWSEISPEAIDLINNLLQVKMRKRYSVD 814 (888)
T ss_pred ----hHHhhccccccC-CCchhhcCHHHHHHHHHHHHHHHHHhcchH
Confidence 222333333333 334566678899999999988888887654
No 351
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3e-35 Score=279.12 Aligned_cols=257 Identities=20% Similarity=0.337 Sum_probs=193.2
Q ss_pred eEEeeeecccCceeEEEEEEc---CCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
|++.+.||+|+||.||+|.+. .+++.||||++..... .+.+.+|+++++.++|++++..++.......
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----- 75 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRA----- 75 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCC-----
Confidence 678999999999999999864 3578899998865422 2347789999999999987766554321100
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-----RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDI 155 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-----~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDL 155 (449)
.......+++++|+ +++|.+++... ...++...++.++.||+.||+|||++||+||||
T Consensus 76 ----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~di 139 (273)
T cd05074 76 ----------------KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDL 139 (273)
T ss_pred ----------------CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeeccc
Confidence 00012347888998 88888776432 124788999999999999999999999999999
Q ss_pred CCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-
Q 013125 156 KPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR- 234 (449)
Q Consensus 156 kp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~- 234 (449)
||+||++ +.++.+||+|||+++....... +.......++..|++||.+.+..++.++|||||||++|||++
T Consensus 140 kp~nili---~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~ 211 (273)
T cd05074 140 AARNCML---NENMTVCVADFGLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTR 211 (273)
T ss_pred chhhEEE---cCCCCEEECcccccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhC
Confidence 9999999 4788999999999986543221 111123345678999999998889999999999999999999
Q ss_pred CCCCCCCChhhcHHHHHHHHHHhh-cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 235 GSLPWQGLKAATKKQKYDKICEKK-VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 235 G~~pf~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
|++||.+..... ....+.... ...+ ...+..+.+++..||..+|++||++.++.+.|+.+
T Consensus 212 g~~p~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 212 GQTPYAGVENSE---IYNYLIKGNRLKQP-----PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCCCCHHH---HHHHHHcCCcCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 899998754322 222222211 1111 24578999999999999999999999999988764
No 352
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=291.75 Aligned_cols=264 Identities=22% Similarity=0.308 Sum_probs=203.4
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---------chhHHHHHHHHHHHcCCCcceeeEeecc
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---------HPQLLYEAKVYKILQGGSKIRLVVFHVD 73 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---------~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 73 (449)
+.+++||-+++.||+|||++||+|.|...++.||+||-....+ +....+|.+|-+.|.|+.++.++.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD---- 534 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD---- 534 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee----
Confidence 5678999999999999999999999999999999998543322 223577888888888887666533
Q ss_pred hhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--Ccc
Q 013125 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR--GFL 151 (449)
Q Consensus 74 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~--gii 151 (449)
+|..+.+.+|-|+|||.|+.+|++.+..+.+++++++.|+.||+.||.||.+. -||
T Consensus 535 ----------------------yfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPII 592 (775)
T KOG1151|consen 535 ----------------------YFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPII 592 (775)
T ss_pred ----------------------eeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCee
Confidence 34457788999999996666666665577899999999999999999999986 499
Q ss_pred ccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC----CCCccchHHHHHH
Q 013125 152 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI----EQSRRDDLESLGY 227 (449)
Q Consensus 152 HrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~~DvwSlG~ 227 (449)
|-||||.|||+-.+...|.+||+|||+++.+.+...+...-..-.....||.+|++||.+.-. ..+.++||||.|+
T Consensus 593 HYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGV 672 (775)
T KOG1151|consen 593 HYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGV 672 (775)
T ss_pred eeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeeh
Confidence 999999999997777889999999999999887765432222224567899999999987643 3789999999999
Q ss_pred HHHHHHhCCCCCCCChhhcHHHHHHHHHH-hhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 228 VLLYFLRGSLPWQGLKAATKKQKYDKICE-KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 228 il~el~~G~~pf~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
|+|.+++|+-||...-.....-....|+. ....+|.. .....+.+++|.+||+..-++|.+..+|
T Consensus 673 IFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K---PvVsseAkaFIRRCLaYRKeDR~DV~qL 738 (775)
T KOG1151|consen 673 IFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK---PVVSSEAKAFIRRCLAYRKEDRIDVQQL 738 (775)
T ss_pred hhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC---CccCHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 99999999999986433222222222222 12222221 1235789999999999999999775544
No 353
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3.4e-35 Score=277.11 Aligned_cols=240 Identities=21% Similarity=0.280 Sum_probs=189.8
Q ss_pred ecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 15 LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
||.|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|++++..+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-------------------- 60 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR-------------------- 60 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeee--------------------
Confidence 7999999999999998899999998764321 235788999999999887555433
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
+...++..|+|+||+ +++|.+++.. ...++...++.++.||+.||+|||++|++|+||+|+||+++ .+
T Consensus 61 -------~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~ 129 (262)
T cd05572 61 -------TFKDKKYIYMLMEYCLGGELWTILRD-RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SN 129 (262)
T ss_pred -------eEEcCCccEEEEecCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CC
Confidence 335667889999998 8999998875 35689999999999999999999999999999999999994 77
Q ss_pred CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHH
Q 013125 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKK 248 (449)
Q Consensus 169 ~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~ 248 (449)
+.++|+|||++........ .....++..|++||.+.+..++.++|+||||+++|+|++|..||..... +..
T Consensus 130 ~~~~l~df~~~~~~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~ 200 (262)
T cd05572 130 GYVKLVDFGFAKKLKSGQK--------TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-DPM 200 (262)
T ss_pred CCEEEeeCCcccccCcccc--------cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-CHH
Confidence 8999999999986654321 1245678899999999888899999999999999999999999987552 122
Q ss_pred HHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC-----HHHHHH
Q 013125 249 QKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD-----YGFLKR 297 (449)
Q Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~-----~~~l~~ 297 (449)
..+..+.........+ ...+.++.+++..||..+|.+||+ ++++.+
T Consensus 201 ~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 201 EIYNDILKGNGKLEFP---NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHhccCCCCCCC---cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 3333333111111111 223789999999999999999999 555543
No 354
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.5e-35 Score=279.62 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=194.3
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
|++.++||+|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++|++++......
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~------------- 67 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIV------------- 67 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeE-------------
Confidence 789999999999999999999889999999987642 123477899999999988766544332
Q ss_pred cccCCCcCeeEEeccc--CCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 85 SSTLGGIPNIKWYGVD--GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~--~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
.. .+..++|+||+.++|.+++......+++..++.++.||+.||+|||+.|++|+||||+||++
T Consensus 68 --------------~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~ 133 (287)
T cd07840 68 --------------TSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI 133 (287)
T ss_pred --------------ecCCCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE
Confidence 22 36889999999889998887655679999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
+ +++.++|+|||++.......... .....++..|+|||.+.+. .++.++||||||+++|||++|..||..
T Consensus 134 ~---~~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~ 204 (287)
T cd07840 134 N---NDGVLKLADFGLARPYTKRNSAD------YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQG 204 (287)
T ss_pred c---CCCCEEEccccceeeccCCCccc------ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 4 78899999999998765543211 1234567889999987754 578999999999999999999999987
Q ss_pred ChhhcHHHHHHHHHHhhc----------------------CCCHHHhhcc-ChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKV----------------------STPIEVLCKS-HPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~----------------------~~~~~~~~~~-~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.........+...+.... .......... .+..+.+++..||..+|.+||+++++.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 205 STELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred CChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 554322222211110000 0000111122 3788999999999999999999887744
No 355
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.5e-35 Score=276.86 Aligned_cols=240 Identities=20% Similarity=0.300 Sum_probs=184.4
Q ss_pred CceEEeeee--cccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhhh
Q 013125 7 VKYKLGRKI--GSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 7 ~~y~i~~~L--G~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
++|++.+.+ |.|+||.||++.+..+++.+|+|+....... ..|+.+...+ +|+
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~e~~~~~~~~~h~--------------------- 69 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---AIEPMVHQLMKDNP--------------------- 69 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---hhhHHHHHHhhcCC---------------------
Confidence 567777777 9999999999999999999999987643211 1133333222 344
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
++..+...+...+..|+||||+ +++|.+++... ..+++..++.++.||+.||+|||+.|++||||||+||++
T Consensus 70 ------~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~ 142 (267)
T PHA03390 70 ------NFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY 142 (267)
T ss_pred ------CEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE
Confidence 4555555556677899999999 89999998764 489999999999999999999999999999999999999
Q ss_pred ecCCCCC-eEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 163 GLGRKAN-QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 163 ~~~~~~~-~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
. ..+ .++|+|||++...... ....++..|+|||++.+..++.++||||||+++|||++|..||..
T Consensus 143 ~---~~~~~~~l~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 208 (267)
T PHA03390 143 D---RAKDRIYLCDYGLCKIIGTP-----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKE 208 (267)
T ss_pred e---CCCCeEEEecCccceecCCC-----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 5 455 8999999998765422 234678999999999998999999999999999999999999985
Q ss_pred ChhhcH-HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC-HHHHH
Q 013125 242 LKAATK-KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD-YGFLK 296 (449)
Q Consensus 242 ~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~-~~~l~ 296 (449)
...... ...+.. .. ..+. ...+..++.+.+++..||+.+|.+||+ ++++.
T Consensus 209 ~~~~~~~~~~~~~---~~-~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 209 DEDEELDLESLLK---RQ-QKKL-PFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred CCcchhhHHHHHH---hh-cccC-CcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 433221 111111 11 1111 222356889999999999999999995 57664
No 356
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.3e-35 Score=279.48 Aligned_cols=247 Identities=27% Similarity=0.386 Sum_probs=196.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHc-CCCcceeeEeecchhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~ 80 (449)
++|.+.+.||+|+||.||+|.+..+++.||+|+..... ....+.+|+++++.++ |++++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~-------------- 66 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIK-------------- 66 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchh--------------
Confidence 47999999999999999999999999999999986531 1335778888888887 665443
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
+.......+..++|||++ +++|.+++.. ...+++..++.++.|++.||.|||++|++|+||+|+|
T Consensus 67 -------------~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~n 132 (280)
T cd05581 67 -------------LYYTFQDEENLYFVLEYAPNGELLQYIRK-YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPEN 132 (280)
T ss_pred -------------HHHHhcCCceEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH
Confidence 333345667889999999 9999998876 4479999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccc-------------cccCCCCCCCCccccccccccCCCCCccchHHHHH
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI-------------PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLG 226 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG 226 (449)
|+++ .++.++|+|||++............ .........++..|++||++.+..++.++||||||
T Consensus 133 i~i~---~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG 209 (280)
T cd05581 133 ILLD---KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALG 209 (280)
T ss_pred eEEC---CCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHH
Confidence 9994 7789999999999866543321100 01223456688999999999988899999999999
Q ss_pred HHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 227 YVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 227 ~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
+++|++++|..||...... ..+..+.......+ ...++.+.+++..||..+|.+||++
T Consensus 210 ~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 210 CIIYQMLTGKPPFRGSNEY---LTFQKILKLEYSFP-----PNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred HHHHHHHhCCCCCCCccHH---HHHHHHHhcCCCCC-----CccCHHHHHHHHHHhcCCHhhCCCc
Confidence 9999999999999875432 22333333222222 3447899999999999999999998
No 357
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5.5e-35 Score=278.76 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=191.7
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHc-CCCcceeeEeecchhhhhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
|++.+.||.|+||+||+|.+..+++.||||.+..... .....+|+..++.++ |++++...
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~---------------- 64 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLK---------------- 64 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHH----------------
Confidence 7899999999999999999988899999998764322 123456888888887 76644432
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
.+...++..|+|||+++++|.+.+.... ..+++..++.++.|++.+|.|||++|++|+||+|+||+++
T Consensus 65 -----------~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~ 133 (283)
T cd07830 65 -----------EVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS 133 (283)
T ss_pred -----------HHhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc
Confidence 2234567889999999999998887643 4689999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+.+.++|+|||++........ .....++..|+|||++.+ ..++.++|+||||+++|||++|.+||...
T Consensus 134 ---~~~~~~l~d~~~~~~~~~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 134 ---GPEVVKIADFGLAREIRSRPP--------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred ---CCCCEEEeecccceeccCCCC--------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 789999999999986544321 124567889999998854 45789999999999999999999999876
Q ss_pred hhhcHHHHHHHHHHhh----------------------cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKK----------------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
...........+.... ............+..+.+++..||..+|.+||+++++..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 203 SEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 5433222221111100 001111222233678999999999999999999887743
No 358
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=324.73 Aligned_cols=253 Identities=25% Similarity=0.368 Sum_probs=203.1
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+.-||.-+.+||.|.||.||-|.+..||+..|+|-++... ..+.+.+|..++..|+|+|+++.+++-
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVE--------- 1303 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVE--------- 1303 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCcee---------
Confidence 3467888999999999999999999999999999765432 244578899999999999988776543
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
...+..+|.|||| ||+|.+++.- ++..++.....+..|++.|+.|||+.|||||||||+|
T Consensus 1304 ------------------vHRekv~IFMEyC~~GsLa~ll~~-gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aN 1364 (1509)
T KOG4645|consen 1304 ------------------VHREKVYIFMEYCEGGSLASLLEH-GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPAN 1364 (1509)
T ss_pred ------------------ecHHHHHHHHHHhccCcHHHHHHh-cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccc
Confidence 2446678999999 9999998874 6667888888999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC---CCccchHHHHHHHHHHHHhCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE---QSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~~DvwSlG~il~el~~G~ 236 (449)
|++ +.++.+|++|||.|........ .+| .+-+...||+.|||||++.+.. -..++||||+||++.||+||+
T Consensus 1365 I~L---d~~g~iK~~DFGsa~ki~~~~~--~~~-~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGk 1438 (1509)
T KOG4645|consen 1365 ILL---DFNGLIKYGDFGSAVKIKNNAQ--TMP-GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGK 1438 (1509)
T ss_pred eee---ecCCcEEeecccceeEecCchh--cCC-HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCC
Confidence 999 5788999999999998776531 112 2345789999999999998754 577999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.||..++.. .+.+..+..+..+ +++ ..++.+-++++++||..||+.|.++.+|++
T Consensus 1439 rPW~~~dne--~aIMy~V~~gh~P-q~P---~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1439 RPWAELDNE--WAIMYHVAAGHKP-QIP---ERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred Cchhhccch--hHHHhHHhccCCC-CCc---hhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 999876543 2333333322222 222 235789999999999999999988765533
No 359
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.3e-35 Score=284.21 Aligned_cols=246 Identities=21% Similarity=0.308 Sum_probs=194.3
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
...+|...+.||+|+||.||+|++..+++.||+|.+..... ...+.+|+++++.++|++++...+
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~---------- 82 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG---------- 82 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEE----------
Confidence 34568889999999999999999998999999998753211 224678999999998887555433
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
+.......++||||+.+++.+++......++..++..++.|++.||.|||+++++||||+|+|
T Consensus 83 -----------------~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~n 145 (308)
T cd06634 83 -----------------CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN 145 (308)
T ss_pred -----------------EEEcCCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHh
Confidence 334567789999999889988887666779999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc---CCCCCccchHHHHHHHHHHHHhCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
|++. .++.++|+|||++...... ....++..|+|||++. ...++.++|||||||++|+|++|.
T Consensus 146 il~~---~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 211 (308)
T cd06634 146 ILLS---EPGLVKLGDFGSASIMAPA-----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211 (308)
T ss_pred EEEC---CCCcEEECCcccceeecCc-----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCC
Confidence 9994 6789999999998765422 2456788999999975 345788999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.||....... ....+....... ......+..+.+++.+||..+|.+||+++++..
T Consensus 212 ~p~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 212 PPLFNMNAMS---ALYHIAQNESPA---LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred CCCccccHHH---HHHHHhhcCCCC---cCcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 9997754322 111222211111 112345788999999999999999999988754
No 360
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4e-35 Score=276.29 Aligned_cols=243 Identities=23% Similarity=0.355 Sum_probs=186.2
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCCCCc-----hhHHHHHHHHHH-HcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-----PQLLYEAKVYKI-LQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~-----~~~~~E~~~l~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
++.||.|+||.||+|.+..+++.||+|++...... ..+..|..++.. +.|+
T Consensus 1 ~~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~----------------------- 57 (260)
T cd05611 1 LKPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESP----------------------- 57 (260)
T ss_pred CccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCC-----------------------
Confidence 36799999999999999989999999987643211 112333333222 2333
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~ 164 (449)
++..+..+....+..|+|+||+ +++|.+++.. ...++...+..++.||+.||.|||+.|++||||+|+||++.
T Consensus 58 ----~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~- 131 (260)
T cd05611 58 ----YVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKT-LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID- 131 (260)
T ss_pred ----CeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-
Confidence 4555555566778899999999 8899998875 35689999999999999999999999999999999999994
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChh
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA 244 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~ 244 (449)
..+.++|+|||++..... .....++..|++||.+.+..++.++||||||+++|+|++|..||.....
T Consensus 132 --~~~~~~l~dfg~~~~~~~-----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 198 (260)
T cd05611 132 --QTGHLKLTDFGLSRNGLE-----------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP 198 (260)
T ss_pred --CCCcEEEeecccceeccc-----------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH
Confidence 778999999999875432 1245678899999999988899999999999999999999999976543
Q ss_pred hcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
. ..+..+.......+ ......++.++.+++..||..+|++||++..+.+++.
T Consensus 199 ~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 199 D---AVFDNILSRRINWP-EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred H---HHHHHHHhcccCCC-CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 2 23333333222222 1222356889999999999999999998766655543
No 361
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.4e-35 Score=288.44 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=194.3
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+|+.+++.+.|++++.........
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 86 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPA------ 86 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcc------
Confidence 5789999999999999999999999999999999876431 123467899999999988865543211100
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.........|+|+|+++++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||
T Consensus 87 ---------------~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Ni 149 (343)
T cd07851 87 ---------------SSLEDFQDVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNI 149 (343)
T ss_pred ---------------ccccccccEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence 00012345899999999999998863 5699999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+++ .++.++|+|||++...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||
T Consensus 150 ll~---~~~~~kL~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf 216 (343)
T cd07851 150 AVN---EDCELKILDFGLARHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLF 216 (343)
T ss_pred EEC---CCCCEEEcccccccccccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 994 6789999999999765432 124467889999998865 36789999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCC--------------------------HHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTP--------------------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~--------------------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
.+..... .+..+.......+ ........++.+.+++..||..+|.+||++.
T Consensus 217 ~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ 293 (343)
T cd07851 217 PGSDHID---QLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAA 293 (343)
T ss_pred CCCChHH---HHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHH
Confidence 8654432 2222222111000 1112234577899999999999999999988
Q ss_pred HHHH
Q 013125 294 FLKR 297 (449)
Q Consensus 294 ~l~~ 297 (449)
+|..
T Consensus 294 ell~ 297 (343)
T cd07851 294 EALA 297 (343)
T ss_pred HHhc
Confidence 7744
No 362
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.1e-35 Score=280.36 Aligned_cols=250 Identities=22% Similarity=0.336 Sum_probs=200.0
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
.+.|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++|++++....
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~--------------- 82 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYD--------------- 82 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEE---------------
Confidence 4679999999999999999999988899999999876543 456788999999999887555433
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
++......|+|+||+ +++|.+++......++...+..++.|++.||.|||+.|++|+||+|+||++
T Consensus 83 ------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i- 149 (286)
T cd06614 83 ------------SYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL- 149 (286)
T ss_pred ------------EEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE-
Confidence 334557889999999 699999998655479999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCCh
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 243 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~ 243 (449)
+.++.++|+|||++......... .....++..|++||++.+..++.++|+||||+++|+|++|..||....
T Consensus 150 --~~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~ 220 (286)
T cd06614 150 --SKDGSVKLADFGFAAQLTKEKSK-------RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP 220 (286)
T ss_pred --cCCCCEEECccchhhhhccchhh-------hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 47789999999998654432211 124457889999999998889999999999999999999999998654
Q ss_pred hhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... ....+...... +. .....++..+.+++..||+.+|.+||++.++.+
T Consensus 221 ~~~---~~~~~~~~~~~-~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 221 PLR---ALFLITTKGIP-PL-KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHH---HHHHHHhcCCC-CC-cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 332 22222221111 11 112336789999999999999999999988754
No 363
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=4.5e-35 Score=280.12 Aligned_cols=246 Identities=21% Similarity=0.301 Sum_probs=194.2
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
+|.-.++||.|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.+.|++++..+.
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~---------------- 83 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYS---------------- 83 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEE----------------
Confidence 5677789999999999999998889999999876432 2334778999999998887555443
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~ 164 (449)
+....+..|+|+||+ +++|.+++.. .+++...+..++.|++.||+|||++|++||||+|+||++
T Consensus 84 -----------~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~-- 148 (285)
T cd06648 84 -----------SYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL-- 148 (285)
T ss_pred -----------EEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE--
Confidence 334567889999999 8899988875 568999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChh
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA 244 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~ 244 (449)
+.++.++|+|||++........ ......|+..|++||++.+..++.++|||||||++|||++|..||.....
T Consensus 149 -~~~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~ 220 (285)
T cd06648 149 -TSDGRVKLSDFGFCAQVSKEVP-------RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP 220 (285)
T ss_pred -cCCCcEEEcccccchhhccCCc-------ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH
Confidence 4788999999998865433211 11345688999999999988899999999999999999999999976433
Q ss_pred hcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
. ..+..+.... .+........+..+.+++..||..+|++||++.++.+
T Consensus 221 ~---~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 221 L---QAMKRIRDNL--PPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred H---HHHHHHHhcC--CCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 2 2222222221 1111111235789999999999999999999887754
No 364
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=6.2e-35 Score=276.42 Aligned_cols=249 Identities=21% Similarity=0.366 Sum_probs=191.7
Q ss_pred ceEEeeeecccCceeEEEEEEcC-CCceEEEEEecCCCC------------chhHHHHHHHHHH-HcCCCcceeeEeecc
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTK------------HPQLLYEAKVYKI-LQGGSKIRLVVFHVD 73 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~-~~~~vAvKv~~~~~~------------~~~~~~E~~~l~~-l~~~~~~~~~~~~~~ 73 (449)
.|++.+.||+|+||.||+|.+.. +++.||+|.+..... ...+..|+.++.. ++|++++.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~------- 73 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVR------- 73 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeee-------
Confidence 48899999999999999999987 678999997653211 1124556666654 56665443
Q ss_pred hhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 013125 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHS-R 148 (449)
Q Consensus 74 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~---~~~~~~~~~~~~i~~qil~~L~~LH~-~ 148 (449)
+..+....+..+++|||+ +++|.+++.. ....++...++.++.|++.||.|||+ .
T Consensus 74 --------------------~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 133 (269)
T cd08528 74 --------------------YYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK 133 (269)
T ss_pred --------------------EEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 333445677899999999 8899888753 24568999999999999999999996 7
Q ss_pred CccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHH
Q 013125 149 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYV 228 (449)
Q Consensus 149 giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~i 228 (449)
|++|+||+|+||+++ ..+.++|+|||++........ .....++..|++||.+.+..++.++||||||++
T Consensus 134 ~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~l 202 (269)
T cd08528 134 RIVHRDLTPNNIMLG---EDDKVTITDFGLAKQKQPESK--------LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCI 202 (269)
T ss_pred ceeecCCCHHHEEEC---CCCcEEEecccceeecccccc--------cccccCcccCcChhhhcCCCCchHHHHHHHHHH
Confidence 899999999999994 788999999999986544321 134568889999999998889999999999999
Q ss_pred HHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 229 LLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 229 l~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
+|||++|..||...... .....+...... +.. ....++.+.+++.+||..||++||++.++...++
T Consensus 203 l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~-~~~--~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 203 LYQMCTLQPPFYSTNML---SLATKIVEAVYE-PLP--EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHhCCCcccccCHH---HHHHHHhhccCC-cCC--cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 99999999999764332 222222222222 111 1245789999999999999999999999887654
No 365
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6e-35 Score=279.47 Aligned_cols=251 Identities=21% Similarity=0.318 Sum_probs=191.1
Q ss_pred ceEEeeeecccCceeEEEEEEc---CCCceEEEEEecCCC------CchhHHHHHHHHHHHc-CCCcceeeEeecchhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGT------KHPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVII 77 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAvKv~~~~~------~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~ 77 (449)
+|++.+.||+|+||.||+|++. .+++.||||++.... ....+.+|++++..++ |++++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~------------ 68 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLV------------ 68 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchh------------
Confidence 4899999999999999999864 467889999876421 1234678999998885 44433
Q ss_pred hhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 78 HALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.+......+...|+||||+ +++|.+.+.. ...++...++.++.|++.+|+|||+.|++|||||
T Consensus 69 ---------------~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~ 132 (288)
T cd05583 69 ---------------TLHYAFQTDTKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIK 132 (288)
T ss_pred ---------------hhheeeecCCEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence 3333345667889999999 7899888764 4568999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC--CCccchHHHHHHHHHHHHh
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE--QSRRDDLESLGYVLLYFLR 234 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~~DvwSlG~il~el~~ 234 (449)
|+||++. .++.++|+|||+++........ ......|+..|++||.+.+.. .+.++||||||+++|||++
T Consensus 133 p~nil~~---~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~t 203 (288)
T cd05583 133 LENILLD---SEGHVVLTDFGLSKEFLAEEEE------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLT 203 (288)
T ss_pred HHHeEEC---CCCCEEEEECcccccccccccc------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHh
Confidence 9999994 6788999999998765433221 122456889999999987765 7889999999999999999
Q ss_pred CCCCCCCChhhcH-HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 235 GSLPWQGLKAATK-KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 235 G~~pf~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
|..||........ ......+....... ...++..+.+++.+||+.+|++||++..+.+.|+
T Consensus 204 g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 204 GASPFTVDGEQNSQSEISRRILKSKPPF-----PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred CCCCcccCcccchHHHHHHHHHccCCCC-----CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 9999964322211 11222222222111 2335788999999999999999999887766654
No 366
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.6e-35 Score=271.28 Aligned_cols=247 Identities=24% Similarity=0.406 Sum_probs=196.7
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
.|.+.+.||+|+||.||+|.+..+++.|++|++.... ....+.+|+++++.++|++++...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~----------------- 63 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYY----------------- 63 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEE-----------------
Confidence 4889999999999999999998889999999987654 345688999999999887655443
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~ 164 (449)
.+.......++++|++ +++|.+++......++...+..++.|++.+|.|||++|++||||+|+||+++
T Consensus 64 ----------~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~- 132 (253)
T cd05122 64 ----------GSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT- 132 (253)
T ss_pred ----------EEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc-
Confidence 3334557889999999 6999998876556799999999999999999999999999999999999994
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChh
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA 244 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~ 244 (449)
+++.++|+|||.+........ .....++..|++||.+.+..++.++||||||+++|+|++|..||.....
T Consensus 133 --~~~~~~l~d~~~~~~~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 202 (253)
T cd05122 133 --SDGEVKLIDFGLSAQLSDTKA--------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP 202 (253)
T ss_pred --cCCeEEEeecccccccccccc--------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch
Confidence 688999999999876554321 1345678899999999988899999999999999999999999986533
Q ss_pred hcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 245 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..... .+....... ......++..+.+++..||..+|++||++.++.+
T Consensus 203 ~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 203 MKALF---KIATNGPPG--LRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHH---HHHhcCCCC--cCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22111 111111111 0011123688999999999999999999887743
No 367
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=7.2e-35 Score=277.42 Aligned_cols=238 Identities=22% Similarity=0.282 Sum_probs=184.5
Q ss_pred ecccCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 15 LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
||+|+||+||+|.+..+++.||+|++.... ....+..|+++++.++|++++..
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~---------------------- 58 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSL---------------------- 58 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeee----------------------
Confidence 699999999999999999999999875421 12235789999999988765443
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 167 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~ 167 (449)
.......+..|+||||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++||||+|+||++ ++
T Consensus 59 -----~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~ 130 (277)
T cd05577 59 -----AYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DD 130 (277)
T ss_pred -----eeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CC
Confidence 23334567889999999 789998886543 369999999999999999999999999999999999999 47
Q ss_pred CCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcH
Q 013125 168 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK 247 (449)
Q Consensus 168 ~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~ 247 (449)
++.++|+|||++........ .....++..|++||++.+..++.++|||||||++|+|++|+.||........
T Consensus 131 ~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 202 (277)
T cd05577 131 HGNVRISDLGLAVELKGGKK--------IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE 202 (277)
T ss_pred CCCEEEccCcchhhhccCCc--------cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc
Confidence 78999999999875543111 1345678899999999888899999999999999999999999987544222
Q ss_pred HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHH
Q 013125 248 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294 (449)
Q Consensus 248 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 294 (449)
...+.. .....+ .......++.+.+++..||..+|.+||++.+
T Consensus 203 ~~~~~~---~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 203 KEELKR---RTLEMA-VEYPDKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHh---cccccc-ccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence 222111 111111 1122345789999999999999999995433
No 368
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=9.3e-35 Score=276.84 Aligned_cols=252 Identities=21% Similarity=0.242 Sum_probs=195.1
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
|++.++||+|+||.||+|++..+++.||+|++.... ....+..|+.+++.++|++++..
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~----------------- 63 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKL----------------- 63 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHH-----------------
Confidence 678899999999999999999999999999887642 23456789999999988765443
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~ 164 (449)
..+.......++|+|+++++|.+++......++...++.++.|++.||+|||+.||+||||+|+||++.
T Consensus 64 ----------~~~~~~~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~- 132 (282)
T cd07829 64 ----------LDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN- 132 (282)
T ss_pred ----------HhhhhcCCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc-
Confidence 233345578999999998899999987556799999999999999999999999999999999999994
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCCCh
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLK 243 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~~~ 243 (449)
+++.++|+|||++........ ......++..|+|||.+.+. .++.++|||||||++|||++|..||.+..
T Consensus 133 --~~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 203 (282)
T cd07829 133 --RDGVLKLADFGLARAFGIPLR-------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS 203 (282)
T ss_pred --CCCCEEEecCCcccccCCCcc-------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence 678999999999976543321 11234557789999998776 78999999999999999999999998754
Q ss_pred hhcHHHHHHHHHHhh---------------------cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 244 AATKKQKYDKICEKK---------------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 244 ~~~~~~~~~~i~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.......+....... ............+..+.+++..||..+|++||+++++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 204 EIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 332222211111000 000111222344678999999999999999999887743
No 369
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.9e-35 Score=276.36 Aligned_cols=245 Identities=21% Similarity=0.272 Sum_probs=190.9
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-------CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-------TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
||.+.++||+|+||.||+|.+..++..+++|+.+.. ........|+.+++.++|+++++..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~------------ 68 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFH------------ 68 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHH------------
Confidence 799999999999999999999877777777775532 1122456788899999888755432
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIK 156 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLk 156 (449)
.+.......++|+||+ +++|.+++... ...+++..++.++.|++.||.|||+.|++|+||+
T Consensus 69 ---------------~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~ 133 (260)
T cd08222 69 ---------------ASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLK 133 (260)
T ss_pred ---------------HHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCC
Confidence 2234556789999999 88998887642 4568999999999999999999999999999999
Q ss_pred CCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCC
Q 013125 157 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 157 p~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
|+||++. .+.++|+|||++........ ......++..|++||.+.+..++.++|+||||+++|+|++|.
T Consensus 134 ~~nili~----~~~~~l~d~g~~~~~~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~ 202 (260)
T cd08222 134 AKNIFLK----NNLLKIGDFGVSRLLMGSCD-------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLA 202 (260)
T ss_pred hhheEee----cCCEeecccCceeecCCCcc-------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 9999993 46799999999977644322 123456788999999998888999999999999999999999
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.||..... ......+... +.+......+.++.+++..||..+|++||++.++.+
T Consensus 203 ~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 203 HAFEGQNF---LSVVLRIVEG----PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred CCCCCccH---HHHHHHHHcC----CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 99975332 2222222221 111223455789999999999999999999988754
No 370
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=6.8e-35 Score=284.59 Aligned_cols=253 Identities=16% Similarity=0.194 Sum_probs=184.8
Q ss_pred eeeeccc--CceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 12 GRKIGSG--SFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 12 ~~~LG~G--~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
...||.| +||+||+|++..+++.||+|+...... .+.+.+|+.+++.++|++++..+.
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~---------------- 66 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWT---------------- 66 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEee----------------
Confidence 3566766 999999999999999999999875432 234678888888888887655433
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
++..++..|+|+||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||+.
T Consensus 67 -----------~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~ 135 (328)
T cd08226 67 -----------VFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS 135 (328)
T ss_pred -----------eEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe
Confidence 334567889999999 78999888753 34589999999999999999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC--CCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI--EQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
..+.++++||+.+.............+.......++..|++||++.+. .++.++|||||||++|||++|+.||.+
T Consensus 136 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~ 212 (328)
T cd08226 136 ---GDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQD 212 (328)
T ss_pred ---CCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 678999999986543322211111111112223456789999998764 478999999999999999999999986
Q ss_pred ChhhcHHHHHHHHHHhhcCCC------------------------------------------HHHhhccChHHHHHHHH
Q 013125 242 LKAATKKQKYDKICEKKVSTP------------------------------------------IEVLCKSHPAEFASYFH 279 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~~------------------------------------------~~~~~~~~~~~~~~l~~ 279 (449)
..... .+..........+ .......++..+.+++.
T Consensus 213 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 289 (328)
T cd08226 213 MLRTQ---MLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVE 289 (328)
T ss_pred cChHH---HHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHH
Confidence 54321 1111110000000 00011234678999999
Q ss_pred HHhCCCCCCCCCHHHHHH
Q 013125 280 YCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 280 ~~l~~~p~~Rp~~~~l~~ 297 (449)
.||..||++||+++++.+
T Consensus 290 ~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 290 LCLQQDPEKRPSASSLLS 307 (328)
T ss_pred HHccCCcccCCCHHHHhh
Confidence 999999999999998854
No 371
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.2e-34 Score=269.96 Aligned_cols=249 Identities=27% Similarity=0.372 Sum_probs=199.8
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.+.||+|+||.||+|.+..+++.|++|+...... .+.+.+|+++++.++|++++.....
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~------------- 67 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGS------------- 67 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEE-------------
Confidence 58999999999999999999998999999999876543 4467889999999998876554432
Q ss_pred hcccCCCcCeeEEecccC--CeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 84 FSSTLGGIPNIKWYGVDG--EDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~--~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.... ...++|+|++ +++|.+++... ..+++..+..++.|++.+|+|||+.|++|+||+|+||
T Consensus 68 --------------~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni 132 (260)
T cd06606 68 --------------ERDEEKNTLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANI 132 (260)
T ss_pred --------------EecCCCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHE
Confidence 2334 6789999999 89999988764 3899999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
++. ..+.++|+|||.+.......... ......++..|++||.+.+...+.++||||||+++|+|++|..||.
T Consensus 133 ~i~---~~~~~~l~d~~~~~~~~~~~~~~-----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 204 (260)
T cd06606 133 LVD---SDGVVKLADFGCAKRLGDIETGE-----GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWS 204 (260)
T ss_pred EEc---CCCCEEEcccccEEecccccccc-----cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 994 67899999999998776543210 1134568889999999998889999999999999999999999998
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.... .......+... ..........+..+.+++..|+..+|.+||++.++..
T Consensus 205 ~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 205 ELGN--PMAALYKIGSS---GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCCc--hHHHHHhcccc---CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 7551 11222222211 1112223444789999999999999999999887743
No 372
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=7e-35 Score=273.55 Aligned_cols=244 Identities=20% Similarity=0.292 Sum_probs=195.5
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.++||.|+||.||+|.+..+++.||+|.+.... ....+.+|+++++.++|++++.
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~----------------- 63 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIIS----------------- 63 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchh-----------------
Confidence 6899999999999999999999999999999876432 2334678889999988876443
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~---~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
+..++......++|+|++ +++|.+++... ...++...++.++.|++.||.|||+.|++|+||+|+|
T Consensus 64 ----------~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~n 133 (256)
T cd08530 64 ----------YKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSAN 133 (256)
T ss_pred ----------hhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcce
Confidence 333344567889999999 88998887642 3568999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
|+++ +.+.++|+|||++....... .....++..|++||.+.+..++.++|+||||+++|||++|+.||
T Consensus 134 i~~~---~~~~~kl~d~g~~~~~~~~~---------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~ 201 (256)
T cd08530 134 ILLV---ANDLVKIGDLGISKVLKKNM---------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPF 201 (256)
T ss_pred EEEe---cCCcEEEeeccchhhhccCC---------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 9995 67889999999997665431 12346788999999999988999999999999999999999999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
....... ....+....... .....+.++.+++..||..+|.+||++.++.+
T Consensus 202 ~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 202 EARSMQD---LRYKVQRGKYPP----IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCCCHHH---HHHHHhcCCCCC----CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 8754322 222222222221 12345789999999999999999999988754
No 373
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.8e-34 Score=305.31 Aligned_cols=143 Identities=23% Similarity=0.465 Sum_probs=123.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++|+++++||+|+||+||+|++..+++.||||++..... ...+..|+.+++.++|++++.+
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~-------------- 69 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHL-------------- 69 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeE--------------
Confidence 689999999999999999999999999999999875322 2357788889988888765544
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+.++....+.||||||+ |++|.+++.. ...++...++.++.||+.||+|||++||+||||||+||
T Consensus 70 -------------~~~~~~~~~~~lVmEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NI 135 (669)
T cd05610 70 -------------YYSLQSANNVYLVMEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNM 135 (669)
T ss_pred -------------EEEEEECCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHE
Confidence 33445667899999999 8999998875 45689999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeeccee
Q 013125 161 LMGLGRKANQVYIIDFGLAK 180 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~ 180 (449)
|+. ..+.+||+|||+++
T Consensus 136 Ll~---~~g~vkL~DFGls~ 152 (669)
T cd05610 136 LIS---NEGHIKLTDFGLSK 152 (669)
T ss_pred EEc---CCCCEEEEeCCCCc
Confidence 994 67899999999986
No 374
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-36 Score=272.53 Aligned_cols=269 Identities=20% Similarity=0.305 Sum_probs=207.6
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
-+.|.+++.||+|+|+.|.+++.++|.+.+|+|++++. .+.+....|..+...-. |..
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as--n~p--------------- 311 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS--NNP--------------- 311 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc--CCC---------------
Confidence 36899999999999999999999999999999987653 33334556665554332 222
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
.++.+..++..+...++|.||. ||+|--.++. .++++++.++.+..+|..||.|||++|||+||||.+|
T Consensus 312 ---------flvglhscfqtesrlffvieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh~rgiiyrdlkldn 381 (593)
T KOG0695|consen 312 ---------FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDN 381 (593)
T ss_pred ---------eEEehhhhhcccceEEEEEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccc
Confidence 3344445566778899999999 8888766654 6789999999999999999999999999999999999
Q ss_pred EEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 160 FLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 160 ill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+|+ +..+++||+|+|+++....+... ..+++||+.|.|||++++..|+..+|+|+||++++||+.|+.||
T Consensus 382 vll---daeghikltdygmcke~l~~gd~-------tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspf 451 (593)
T KOG0695|consen 382 VLL---DAEGHIKLTDYGMCKEGLGPGDT-------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 451 (593)
T ss_pred eEE---ccCCceeecccchhhcCCCCCcc-------cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCc
Confidence 999 68999999999999875554432 36899999999999999999999999999999999999999999
Q ss_pred CC--Chh---hcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCCCccc
Q 013125 240 QG--LKA---ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVF 314 (449)
Q Consensus 240 ~~--~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~ 314 (449)
.- +.+ ......++-|+++.+.+|... +-....++...+..||.+|.... ...-|.+ ..+..|....
T Consensus 452 divgm~n~d~ntedylfqvilekqiriprsl-----svkas~vlkgflnkdp~erlgc~-~~~g~~d---ik~h~ffr~i 522 (593)
T KOG0695|consen 452 DIVGMDNPDMNTEDYLFQVILEKQIRIPRSL-----SVKASHVLKGFLNKDPKERLGCR-PQTGFSD---IKSHAFFRSI 522 (593)
T ss_pred ceecCCCcccchhHHHHHHHhhhccccccee-----ehhhHHHHHHhhcCCcHHhcCCC-cccchhh---hhcchhhhhC
Confidence 63 221 223445556777777777433 55677889999999999996432 1011111 1234455568
Q ss_pred cccccc
Q 013125 315 DWTILK 320 (449)
Q Consensus 315 dw~~l~ 320 (449)
||.++.
T Consensus 523 dwd~le 528 (593)
T KOG0695|consen 523 DWDLLE 528 (593)
T ss_pred CHHHHh
Confidence 898764
No 375
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.7e-34 Score=275.23 Aligned_cols=243 Identities=21% Similarity=0.343 Sum_probs=185.7
Q ss_pred ceEEeeeecccCceeEEEEEEc---CCCceEEEEEecCCC------CchhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGT------KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAvKv~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
.|++.+.||.|+||.||+|++. .+++.||+|++.... ....+.+|+++++.+.+..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--------------- 65 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP--------------- 65 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCC---------------
Confidence 4899999999999999999985 478899999876431 1234677999998885322
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
+++.+..+...+...|+|+||+ +++|.+.+.. ...++...+..++.|++.||.|||+.|++||||+|
T Consensus 66 -----------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p 133 (290)
T cd05613 66 -----------FLVTLHYAFQTDTKLHLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKL 133 (290)
T ss_pred -----------ChhceeeEeecCCeEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 3444444455667889999999 8899988875 45689999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC--CCCccchHHHHHHHHHHHHhC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI--EQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~DvwSlG~il~el~~G 235 (449)
+|||++ .++.++|+|||++.......... .....|+..|++||.+.+. .++.++||||||+++|+|++|
T Consensus 134 ~nil~~---~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g 204 (290)
T cd05613 134 ENILLD---SNGHVVLTDFGLSKEFHEDEVER------AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTG 204 (290)
T ss_pred HHeEEC---CCCCEEEeeCccceecccccccc------cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcC
Confidence 999994 77899999999997654332211 1245688999999998753 468899999999999999999
Q ss_pred CCCCCCChhhcHHHHH-HHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 236 SLPWQGLKAATKKQKY-DKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
..||...........+ ..+....... ...+++.+.+++.+||..+|++||+
T Consensus 205 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~~l~~~p~~R~~ 256 (290)
T cd05613 205 ASPFTVDGEKNSQAEISRRILKSEPPY-----PQEMSALAKDIIQRLLMKDPKKRLG 256 (290)
T ss_pred CCCCCcCCccccHHHHHHHhhccCCCC-----CccCCHHHHHHHHHHhcCCHHHhcC
Confidence 9999753222211222 1221111111 2345788999999999999999983
No 376
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.3e-35 Score=274.16 Aligned_cols=249 Identities=25% Similarity=0.380 Sum_probs=192.4
Q ss_pred ecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 15 LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
||.|+||.||+|++..+++.||+|++..... ...+.+|+++++.++|++++...
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~--------------------- 59 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY--------------------- 59 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHH---------------------
Confidence 6899999999999998899999998865422 33577888999999888755432
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
.....+...|+++|++ +++|.+++... ..++...++.++.||+.||.|||++|++||||+|+||++ +++
T Consensus 60 ------~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~---~~~ 129 (265)
T cd05579 60 ------YSFQGKKNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSN 129 (265)
T ss_pred ------HheecCcEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE---cCC
Confidence 2234567889999999 78999988763 478999999999999999999999999999999999999 478
Q ss_pred CeEEEEeecceeeecCCCCCc-cccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcH
Q 013125 169 NQVYIIDFGLAKKYRDPTTNR-HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK 247 (449)
Q Consensus 169 ~~vkL~DfGla~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~ 247 (449)
+.++|+|||++.......... ...........++..|++||.+.+..++.++||||||+++|+|++|..||......
T Consensus 130 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-- 207 (265)
T cd05579 130 GHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-- 207 (265)
T ss_pred CCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--
Confidence 899999999987654332100 00001123456788999999999888999999999999999999999999765432
Q ss_pred HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 013125 248 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 300 (449)
Q Consensus 248 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~ 300 (449)
..+..+.......+.. ...+..+.+++..||..+|.+||++..+.+.|+
T Consensus 208 -~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 208 -EIFQNILNGKIEWPED---VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -HHHHHHhcCCcCCCcc---ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 2333333323222211 124789999999999999999999966666554
No 377
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.8e-34 Score=268.97 Aligned_cols=245 Identities=23% Similarity=0.361 Sum_probs=196.8
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+|++++..++|++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~---------------- 64 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKY---------------- 64 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEE----------------
Confidence 68999999999999999999998899999998775532 3357889999998888764443
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
..+...++..+++||++ +++|.+++... ..+++..+..++.|++.||.|||++||+||||+|+||++
T Consensus 65 -----------~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i 132 (254)
T cd06627 65 -----------IGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT 132 (254)
T ss_pred -----------EEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE
Confidence 33345567889999999 78999888753 678999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
+ .++.++|+|||++......... .....++..|++||...+..++.++||||||+++|+|++|..||...
T Consensus 133 ~---~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~ 202 (254)
T cd06627 133 T---KDGVVKLADFGVATKLNDVSKD-------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDL 202 (254)
T ss_pred C---CCCCEEEeccccceecCCCccc-------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCc
Confidence 4 6789999999999876543321 23456788999999998888899999999999999999999999865
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... .....+..... .......+..+.+++..||..+|++||++.++..
T Consensus 203 ~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 203 NPM---AALFRIVQDDH----PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred cHH---HHHHHHhccCC----CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 432 12222221111 1223455789999999999999999999887743
No 378
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.5e-34 Score=277.43 Aligned_cols=244 Identities=19% Similarity=0.301 Sum_probs=191.0
Q ss_pred EEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 10 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
....+||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|++++..+
T Consensus 23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~------------------- 83 (292)
T cd06657 23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY------------------- 83 (292)
T ss_pred hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhhee-------------------
Confidence 33468999999999999999999999999875432 233578899999999888655443
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
.+....+..++||||+ +++|.+++. ...+++..++.++.|++.+|+|||+.|++||||+|+||++ +
T Consensus 84 --------~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv---~ 150 (292)
T cd06657 84 --------NSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL---T 150 (292)
T ss_pred --------eEEEeCCEEEEEEecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---C
Confidence 3345668899999999 778887664 3468999999999999999999999999999999999999 4
Q ss_pred CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhc
Q 013125 167 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246 (449)
Q Consensus 167 ~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~ 246 (449)
.++.++|+|||++........ ......++..|++||.+.+..++.++|+||||+++|+|++|..||.+.....
T Consensus 151 ~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~ 223 (292)
T cd06657 151 HDGRVKLSDFGFCAQVSKEVP-------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 223 (292)
T ss_pred CCCCEEEcccccceecccccc-------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 678899999999876543221 1234568899999999988889999999999999999999999998754322
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... .+ .......... ....+..+.+++..||..+|.+||++.++..
T Consensus 224 ~~~---~~-~~~~~~~~~~-~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 224 AMK---MI-RDNLPPKLKN-LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHH---HH-HhhCCcccCC-cccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 211 11 1112111111 1345788999999999999999999988755
No 379
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-37 Score=293.32 Aligned_cols=260 Identities=22% Similarity=0.330 Sum_probs=206.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----C-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----K-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
.+++++-.||-|+||.|=++........+|+|++++.. + .+....|..||...+.+.+++
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvr--------------- 484 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVR--------------- 484 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHH---------------
Confidence 45678889999999999999886555568999887642 1 223677888887766554333
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
++--..+.++.|++||-| ||.|...+.. .+.|+..+++.++.-+++|++|||++|||+|||||+|+
T Consensus 485 ------------LYrTfrd~kyvYmLmEaClGGElWTiLrd-Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENl 551 (732)
T KOG0614|consen 485 ------------LYRTFRDSKYVYMLMEACLGGELWTILRD-RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENL 551 (732)
T ss_pred ------------HHHHhccchhhhhhHHhhcCchhhhhhhh-cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhhe
Confidence 333345778999999999 9999998876 66799999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
|+ +..|-+||+|||+|+....... ..+++||+.|.|||++++..-+.++|.||||+++|||++|++||.
T Consensus 552 lL---d~~Gy~KLVDFGFAKki~~g~K--------TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs 620 (732)
T KOG0614|consen 552 LL---DNRGYLKLVDFGFAKKIGSGRK--------TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFS 620 (732)
T ss_pred ee---ccCCceEEeehhhHHHhccCCc--------eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCC
Confidence 99 5899999999999998776543 358999999999999999999999999999999999999999999
Q ss_pred CChhhcHHHHHHHHHHhh--cCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHHHhcCCCCCccccc
Q 013125 241 GLKAATKKQKYDKICEKK--VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY--GFLKRLFHDLFSREGYDFDFVFDW 316 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~--~~l~~~l~~~~~~~~~~~~~~~dw 316 (449)
+.++. ..+..|+.+. +.+| +.++....+++.+....+|.+|..+ .-|.+ ...+.|...|||
T Consensus 621 ~~dpm---ktYn~ILkGid~i~~P-----r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~D-------IkkH~Wf~gfdw 685 (732)
T KOG0614|consen 621 GVDPM---KTYNLILKGIDKIEFP-----RRITKTATDLIKKLCRDNPTERLGYQKGGIND-------IKKHRWFEGFDW 685 (732)
T ss_pred CCchH---HHHHHHHhhhhhhhcc-----cccchhHHHHHHHHHhcCcHhhhccccCChHH-------HHhhhhhhcCCh
Confidence 87665 4455454432 2333 4457788999999999999999863 22222 123456667899
Q ss_pred cccc
Q 013125 317 TILK 320 (449)
Q Consensus 317 ~~l~ 320 (449)
.-++
T Consensus 686 eglr 689 (732)
T KOG0614|consen 686 EGLR 689 (732)
T ss_pred hhhh
Confidence 7654
No 380
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=288.50 Aligned_cols=255 Identities=22% Similarity=0.299 Sum_probs=210.6
Q ss_pred eEEeeeecccCceeEEEEEEcCCCc----eEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~----~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
.+..++||+|+||+||+|.+.-.++ +||+|++..... ..+++.|+-+|..|.|++++++++++..
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~-------- 769 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML-------- 769 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc--------
Confidence 4567899999999999999864443 699998765533 4578999999999999999998877632
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
....||++|+ +|+|.++++..+..+-.+..+.|..||+.||.|||+++++||||..+||
T Consensus 770 --------------------s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNV 829 (1177)
T KOG1025|consen 770 --------------------STLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNV 829 (1177)
T ss_pred --------------------chHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhhe
Confidence 2266899999 9999999998888899999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 239 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf 239 (449)
||. ....+|+.|||+|+........-.. ......+.|||-|.+....|+.++|||||||++||++| |..||
T Consensus 830 LVk---sP~hvkitdfgla~ll~~d~~ey~~-----~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py 901 (1177)
T KOG1025|consen 830 LVK---SPNHVKITDFGLAKLLAPDEKEYSA-----PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPY 901 (1177)
T ss_pred eec---CCCeEEEEecchhhccCcccccccc-----cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCcc
Confidence 994 8899999999999987665443222 23345678999999999999999999999999999999 99999
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhc
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 306 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 306 (449)
.++...+....+.+ ..+++.| ..++.++.-+|-.||..|+..||.|+++...|.+..+..
T Consensus 902 ~gi~~~eI~dlle~--geRLsqP-----piCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 902 DGIPAEEIPDLLEK--GERLSQP-----PICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred CCCCHHHhhHHHhc--cccCCCC-----CCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 99876544433322 2233333 233789999999999999999999999999998886543
No 381
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.9e-35 Score=284.48 Aligned_cols=276 Identities=22% Similarity=0.286 Sum_probs=200.2
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc-----hhHHHHHHHHHHHcCCCcceeeEeecchhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-----PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIH 78 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~-----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 78 (449)
+-..-|..++.||-|+||+|.+|...+|...+|+|.+.+.+.. .....|..
T Consensus 626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERD------------------------ 681 (1034)
T KOG0608|consen 626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERD------------------------ 681 (1034)
T ss_pred ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhh------------------------
Confidence 3456799999999999999999999999999999976532110 01122223
Q ss_pred hhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 79 ALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
++-+.++.-++++++.+.+.+.+|+||||. ||++-.++.. -+-|.+..++.++.++.+|++++|..|+|||||||
T Consensus 682 ---ILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIr-mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKP 757 (1034)
T KOG0608|consen 682 ---ILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKP 757 (1034)
T ss_pred ---hHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHhccceecccCc
Confidence 333445556788888889999999999999 9999888875 45699999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccc------------c---------------cc--------CCCCCCCC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI------------P---------------YR--------ENKNLTGT 202 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~------------~---------------~~--------~~~~~~gt 202 (449)
+|||| |.+|+|||+||||+.-++-......+ | .+ ..-.++||
T Consensus 758 DNILI---DrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt 834 (1034)
T KOG0608|consen 758 DNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGT 834 (1034)
T ss_pred cceEE---ccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCC
Confidence 99999 68999999999999754322111000 0 00 12367899
Q ss_pred ccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHh
Q 013125 203 ARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQ 282 (449)
Q Consensus 203 ~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l 282 (449)
+.|+|||++....|+.-||+||.|+|||||+.|++||-...+.....++.. -+.-+.+ ..|.+++.+..++|.++.
T Consensus 835 ~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~n-w~~~l~~---~~~~~ls~e~~~li~kLc 910 (1034)
T KOG0608|consen 835 PNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVIN-WRNFLHI---PYQGNLSKEALDLIQKLC 910 (1034)
T ss_pred CcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeee-hhhcccc---ccccccCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999987665433222111 0112222 245666788888887655
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCCCccccccccccc
Q 013125 283 SLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQ 322 (449)
Q Consensus 283 ~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~dw~~l~~~ 322 (449)
.++++|..-. ..+.+ ....|...+||..+..+
T Consensus 911 -~sad~RLGkn-g~d~v------KaHpfFkgIDfsslRkq 942 (1034)
T KOG0608|consen 911 -CSADSRLGKN-GADQV------KAHPFFKGIDFSSLRKQ 942 (1034)
T ss_pred -cChhhhhccc-chhhh------hcCccccccchHhhhhc
Confidence 3677776422 11111 22455566777655443
No 382
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=285.83 Aligned_cols=241 Identities=21% Similarity=0.260 Sum_probs=188.9
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHH-HcCCCcceeeEeecchhhhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKI-LQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~-l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+.+.|.+...||.|+|+.|-.+.+..+++..++|++.... ....+|+.++.. -+|++++....+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~--~~~~~e~~~~~~~~~h~niv~~~~v------------- 384 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA--DDNQDEIPISLLVRDHPNIVKSHDV------------- 384 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc--cccccccchhhhhcCCCcceeecce-------------
Confidence 4578999999999999999999999999999999987652 233455544433 455655544333
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
..++.+.|+|||++ |+-+.+-+.+ .+.+. ..+..|++||+.++.|||++|||||||||+|||+
T Consensus 385 --------------~~~~~~~~~v~e~l~g~ell~ri~~-~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~ 448 (612)
T KOG0603|consen 385 --------------YEDGKEIYLVMELLDGGELLRRIRS-KPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILL 448 (612)
T ss_pred --------------ecCCceeeeeehhccccHHHHHHHh-cchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheee
Confidence 35678899999999 6666665554 33344 7778899999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
. ++.++++|+|||.++...... .+-+-|..|.|||++...+|+++|||||||++||+|++|+.||...
T Consensus 449 ~--~~~g~lrltyFG~a~~~~~~~----------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~ 516 (612)
T KOG0603|consen 449 D--GSAGHLRLTYFGFWSELERSC----------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAH 516 (612)
T ss_pred c--CCCCcEEEEEechhhhCchhh----------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccC
Confidence 4 378899999999998765542 1335588999999999999999999999999999999999999875
Q ss_pred hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 243 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
... .+....+....+. ...+++.++|+.+||+.||.+|+++.++..
T Consensus 517 P~~--~ei~~~i~~~~~s-------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 517 PAG--IEIHTRIQMPKFS-------ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred Cch--HHHHHhhcCCccc-------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 443 2333332222222 455789999999999999999999998744
No 383
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-34 Score=288.34 Aligned_cols=249 Identities=20% Similarity=0.332 Sum_probs=203.3
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
.+.|+|.+.||.|.+|.||+++..++++.+|+||...+.+ ++++..|.++++.+.+..
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hp--------------------- 76 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHP--------------------- 76 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCC---------------------
Confidence 4679999999999999999999999999999999887654 446777888888775433
Q ss_pred cccCCCcCeeEEec-----ccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 85 SSTLGGIPNIKWYG-----VDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 85 ~~~~~~i~~~~~~~-----~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
+++.+++++ ..++.+||||||| ||+.-|+++.. +.++.+..+..|++.++.||.+||...+||||||=
T Consensus 77 -----nv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG 151 (953)
T KOG0587|consen 77 -----NVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKG 151 (953)
T ss_pred -----CcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccC
Confidence 444444444 2568899999999 99999999854 66799999999999999999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-----CCCccchHHHHHHHHHHH
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-----EQSRRDDLESLGYVLLYF 232 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~~DvwSlG~il~el 232 (449)
.|||++ +.+.|||+|||.+...+..-. ..++..||+.|||||++.-. .|+.++|+||||++..||
T Consensus 152 ~NiLLT---~e~~VKLvDFGvSaQldsT~g-------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEl 221 (953)
T KOG0587|consen 152 QNVLLT---ENAEVKLVDFGVSAQLDSTVG-------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEM 221 (953)
T ss_pred ceEEEe---ccCcEEEeeeeeeeeeecccc-------cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehh
Confidence 999996 889999999999987765432 24688999999999999743 478899999999999999
Q ss_pred HhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHh-hccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 233 LRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL-CKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 233 ~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
.-|.+|+.++.+.. .+ ....-.+|+... ++.+..+|.++|..||..|.++||+..++.
T Consensus 222 adG~PPl~DmHPmr---aL---F~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll 280 (953)
T KOG0587|consen 222 AEGAPPLCDMHPMR---AL---FLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELL 280 (953)
T ss_pred cCCCCCccCcchhh---hh---ccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhc
Confidence 99999999876542 11 111222222222 456688999999999999999999977653
No 384
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.2e-33 Score=273.99 Aligned_cols=247 Identities=19% Similarity=0.244 Sum_probs=180.1
Q ss_pred CceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCcCee
Q 013125 19 SFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNI 94 (449)
Q Consensus 19 ~fg~Vy~a~~~~~~~~vAvKv~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 94 (449)
++|.||.+++..+++.||||++.... ....+..|+++++.++|++++..+.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~------------------------- 66 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVT------------------------- 66 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhh-------------------------
Confidence 44566666777789999999986541 2335889999999999987665433
Q ss_pred EEecccCCeeEEEEecC-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEE
Q 013125 95 KWYGVDGEDNVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVY 172 (449)
Q Consensus 95 ~~~~~~~~~~~lv~e~~-g~sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vk 172 (449)
+....+..+++|||+ +++|.+++... ...++...+..++.|++.||+|||++||+||||||+||+++ .++.++
T Consensus 67 --~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~k 141 (314)
T cd08216 67 --SFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVV 141 (314)
T ss_pred --eeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceE
Confidence 234567789999999 78898888753 45689999999999999999999999999999999999994 678999
Q ss_pred EEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC--CCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHH
Q 013125 173 IIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI--EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQK 250 (449)
Q Consensus 173 L~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~ 250 (449)
|+|||.+............+........++..|+|||++.+. .++.++|||||||++|||++|..||....... ..
T Consensus 142 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~ 219 (314)
T cd08216 142 LSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--ML 219 (314)
T ss_pred EecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HH
Confidence 999999876643322111111112345677889999998763 58899999999999999999999998644321 11
Q ss_pred HHHHHHhh---------------cC-------C------CHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 251 YDKICEKK---------------VS-------T------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 251 ~~~i~~~~---------------~~-------~------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
...+.... .. . ...........++.+++..||..+|++||+++++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 220 LEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred HHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 11110000 00 0 000011223467889999999999999999988755
No 385
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.3e-33 Score=261.34 Aligned_cols=234 Identities=26% Similarity=0.380 Sum_probs=188.4
Q ss_pred ecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 15 LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
||.|+||.||+|.+..+++.||+|++..... ...+..|+++++.++|++++..
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~---------------------- 58 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKL---------------------- 58 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHH----------------------
Confidence 6999999999999988899999998765422 2357889999999988764433
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 168 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~ 168 (449)
......+...|+|||++ +++|.+++.. ...+++..+..++.|++.||.|||+.+++|+||+|+||+++ ..
T Consensus 59 -----~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~ 129 (250)
T cd05123 59 -----HYAFQTEEKLYLVLEYAPGGELFSHLSK-EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---AD 129 (250)
T ss_pred -----HHHeecCCeeEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CC
Confidence 22335677889999999 9999998875 34689999999999999999999999999999999999994 77
Q ss_pred CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHH
Q 013125 169 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKK 248 (449)
Q Consensus 169 ~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~ 248 (449)
+.++|+|||++........ ......++..|++||.+.+..++.++|+||||+++|++++|..||..... .
T Consensus 130 ~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~ 199 (250)
T cd05123 130 GHIKLTDFGLAKELSSEGS-------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---K 199 (250)
T ss_pred CcEEEeecCcceecccCCC-------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---H
Confidence 8999999999977654321 12355678899999999988899999999999999999999999976443 2
Q ss_pred HHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHH
Q 013125 249 QKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGF 294 (449)
Q Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 294 (449)
.....+.......+ ...+..+.+++..||..+|++||++.+
T Consensus 200 ~~~~~~~~~~~~~~-----~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 200 EIYEKILKDPLRFP-----EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHhcCCCCCC-----CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 33333333222222 334789999999999999999999843
No 386
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.7e-34 Score=298.94 Aligned_cols=282 Identities=20% Similarity=0.239 Sum_probs=193.5
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh-h
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT-I 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~ 82 (449)
..|+.++.||+||||.||+|+++-.|+.+|||.+..... ...+.+|+.++.+|+|+|+++++...++........ +
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 568889999999999999999999999999998765532 224789999999999999999885433321110000 0
Q ss_pred h---------h-------------------------cc-----cCCCcC-------------------------eeEEec
Q 013125 83 I---------F-------------------------SS-----TLGGIP-------------------------NIKWYG 98 (449)
Q Consensus 83 ~---------~-------------------------~~-----~~~~i~-------------------------~~~~~~ 98 (449)
+ . .. ...+.+ ....-+
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence 0 0 00 000000 000000
Q ss_pred --------------------cc-------CCeeEEEEecCCCCHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHhCCc
Q 013125 99 --------------------VD-------GEDNVLVLDLLGPSLEDLFVYCRRKF-SLKTVLMLADQMIARIEYVHSRGF 150 (449)
Q Consensus 99 --------------------~~-------~~~~~lv~e~~g~sL~~~~~~~~~~~-~~~~~~~i~~qil~~L~~LH~~gi 150 (449)
.+ ....||-||||..++...+...+... .....+++.+||++||.|+|++||
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~gi 718 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGI 718 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCce
Confidence 00 03468999999665555544334333 467889999999999999999999
Q ss_pred cccCCCCCcEEeecCCCCCeEEEEeecceeeec----C------CCCCcc-ccccCCCCCCCCccccccccccCCC---C
Q 013125 151 LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR----D------PTTNRH-IPYRENKNLTGTARYASCNTHLGIE---Q 216 (449)
Q Consensus 151 iHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~----~------~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~---~ 216 (449)
|||||||.||++ +.++.|||+|||+|.... . +.+... ..-....+.+||.-|+|||++.+.. |
T Consensus 719 IHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Y 795 (1351)
T KOG1035|consen 719 IHRDLKPRNIFL---DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKY 795 (1351)
T ss_pred eeccCCcceeEE---cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccc
Confidence 999999999999 589999999999998621 0 001110 0111345778999999999988665 9
Q ss_pred CccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 217 SRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 217 s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
+.|+|+||||+|++||+. ||.. ..+-...+..+....++.+ ..++.+.-+.-+.+|+.+++.||.+||++.+|.
T Consensus 796 n~KiDmYSLGIVlFEM~y---PF~T--sMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL 869 (1351)
T KOG1035|consen 796 NSKIDMYSLGIVLFEMLY---PFGT--SMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSKRPTATELL 869 (1351)
T ss_pred cchhhhHHHHHHHHHHhc---cCCc--hHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence 999999999999999994 5653 2333334444443444444 222222234567899999999999999998875
Q ss_pred H
Q 013125 297 R 297 (449)
Q Consensus 297 ~ 297 (449)
.
T Consensus 870 ~ 870 (1351)
T KOG1035|consen 870 N 870 (1351)
T ss_pred h
Confidence 4
No 387
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-33 Score=291.58 Aligned_cols=260 Identities=21% Similarity=0.308 Sum_probs=202.0
Q ss_pred cCCceEEeeeecccCceeEEEEEEc---C----CCceEEEEEecCCCC---chhHHHHHHHHHHHc-CCCcceeeEeecc
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHV---D----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQ-GGSKIRLVVFHVD 73 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~---~----~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~-~~~~~~~~~~~~~ 73 (449)
-.++..+.+.||+|.||.||+|.-. . ....||||..+.... ...+..|+++|+.+. |++++.+
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~l------ 367 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNL------ 367 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhh------
Confidence 3445577889999999999999753 1 145799999876544 345889999998875 5554444
Q ss_pred hhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc---------------CCCCHHHHHHHHHH
Q 013125 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQ 137 (449)
Q Consensus 74 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~---------------~~~~~~~~~~i~~q 137 (449)
..+.......++|+||+ .|+|..++..++ ..++....+.+++|
T Consensus 368 ---------------------lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~Q 426 (609)
T KOG0200|consen 368 ---------------------LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQ 426 (609)
T ss_pred ---------------------eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHH
Confidence 44445578889999999 999999998765 34889999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCC-CCCccccccccccCCCC
Q 013125 138 MIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNL-TGTARYASCNTHLGIEQ 216 (449)
Q Consensus 138 il~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~ 216 (449)
|+.|++||+++.+|||||.++|||++ .+..+||+|||+|+....... |+...+. .-...|||||.+....|
T Consensus 427 Ia~GMe~L~~~~~vHRDLAaRNVLi~---~~~~~kIaDFGlar~~~~~~~-----y~~~~~~~~LP~kWmApEsl~~~~f 498 (609)
T KOG0200|consen 427 IANGMEYLASVPCVHRDLAARNVLIT---KNKVIKIADFGLARDHYNKDY-----YRTKSSAGTLPVKWMAPESLFDRVF 498 (609)
T ss_pred HHHHHHHHhhCCccchhhhhhhEEec---CCCEEEEccccceeccCCCCc-----eEecCCCCccceeecCHHHhccCcc
Confidence 99999999999999999999999995 778999999999986544332 2111111 13556999999999999
Q ss_pred CccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 217 SRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 217 s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
+.++||||||++||||++ |..||.+..... ..+. .+........+. .++.++.++|..||..+|++||+|.++
T Consensus 499 t~kSDVWSfGI~L~EifsLG~~PYp~~~~~~--~l~~-~l~~G~r~~~P~---~c~~eiY~iM~~CW~~~p~~RP~F~~~ 572 (609)
T KOG0200|consen 499 TSKSDVWSFGILLWEIFTLGGTPYPGIPPTE--ELLE-FLKEGNRMEQPE---HCSDEIYDLMKSCWNADPEDRPTFSEC 572 (609)
T ss_pred cccchhhHHHHHHHHHhhCCCCCCCCCCcHH--HHHH-HHhcCCCCCCCC---CCCHHHHHHHHHHhCCCcccCCCHHHH
Confidence 999999999999999998 999999844222 1222 223333333333 348899999999999999999999999
Q ss_pred HHHHHHHHHh
Q 013125 296 KRLFHDLFSR 305 (449)
Q Consensus 296 ~~~l~~~~~~ 305 (449)
.+.|...+..
T Consensus 573 ~~~~~~~l~~ 582 (609)
T KOG0200|consen 573 VEFFEKHLQD 582 (609)
T ss_pred HHHHHHHHHH
Confidence 9999886654
No 388
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=266.98 Aligned_cols=211 Identities=21% Similarity=0.334 Sum_probs=169.0
Q ss_pred EeeeecccCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
=.+.||.|+||.||.+.|.+.++.||+|.+.+- ....++++|++++-.++|.|....+...
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDIL--------------- 121 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDIL--------------- 121 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhc---------------
Confidence 357899999999999999999999999965432 2345689999999999999866543321
Q ss_pred cCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
.-+.+.+| ...|+++|++..+|..++.. ...++...++-+++||++||+|||+.||+||||||.|+|+ +
T Consensus 122 ---QPph~dfF----qEiYV~TELmQSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---N 190 (449)
T KOG0664|consen 122 ---QPANPSFF----QELYVLTELMQSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---N 190 (449)
T ss_pred ---CCCCchHH----HHHHHHHHHHHhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---c
Confidence 11122222 34688999999999988875 6779999999999999999999999999999999999999 5
Q ss_pred CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCCChhh
Q 013125 167 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAA 245 (449)
Q Consensus 167 ~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~~~~~~ 245 (449)
.++.+||+|||+|+........ .....+.|..|+|||++.|.. |+.++||||.|||+.|++..+..|+...+.
T Consensus 191 SNCvLKICDFGLARvee~d~~~------hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi 264 (449)
T KOG0664|consen 191 SNCILKICDFGLARTWDQRDRL------NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI 264 (449)
T ss_pred cCceEEecccccccccchhhhh------hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH
Confidence 8899999999999876543321 112335688999999999875 999999999999999999999999987766
Q ss_pred cHHHHHHH
Q 013125 246 TKKQKYDK 253 (449)
Q Consensus 246 ~~~~~~~~ 253 (449)
...+.+..
T Consensus 265 qQL~lItd 272 (449)
T KOG0664|consen 265 EQLQMIID 272 (449)
T ss_pred HHHHHHHH
Confidence 55544433
No 389
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=260.61 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=189.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHH-cCCCcceeeEeecchhhhhhhhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKIL-QGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.+.+-+..||.|+||+|++-.++.+|+..|||.+..... ..+++.|.+...+- +.+
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp-------------------- 123 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCP-------------------- 123 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCc--------------------
Confidence 344556789999999999999999999999998876543 33455665543332 233
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCC
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC----RRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKP 157 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~----~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp 157 (449)
+|++++...-.+...||.||+|..++..++++. ...+++..+-.|..-.+.||.||-+ ..|||||+||
T Consensus 124 -------~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKP 196 (361)
T KOG1006|consen 124 -------NIVKFYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKP 196 (361)
T ss_pred -------HHHHHhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCCh
Confidence 333334344467788999999999998887643 4568888888888889999999997 5899999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC--CCCCccchHHHHHHHHHHHHhC
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG--IEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~~DvwSlG~il~el~~G 235 (449)
+|||+ +..|.|||+|||++-.+.+.-. ..--+|-..|||||-+.. ..|+.++||||||++|||++||
T Consensus 197 SNILl---dr~G~vKLCDFGIcGqLv~SiA--------kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG 265 (361)
T KOG1006|consen 197 SNILL---DRHGDVKLCDFGICGQLVDSIA--------KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATG 265 (361)
T ss_pred hheEE---ecCCCEeeecccchHhHHHHHH--------hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecC
Confidence 99999 5899999999999865543321 124467889999998863 3589999999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHH-HhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIE-VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..||.+... ..+++..++.+..+.... .-+-.+...+..++..|+..|-.+||.|.+|+.
T Consensus 266 ~fPyr~w~s--vfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 266 NFPYRKWDS--VFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CCCcchHHH--HHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 999998665 334444444333222211 122345778999999999999999999998865
No 390
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=6.2e-33 Score=286.93 Aligned_cols=263 Identities=19% Similarity=0.210 Sum_probs=169.0
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCC----CceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDT----NEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~----~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
..++|.+.++||+|+||.||+|++..+ +..||+|.+...... |..+...+++....... .. ...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e~l~~~~~~~~~----~~--~~~- 197 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNERVRRACPNSCA----DF--VYG- 197 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHHHHHhhchhhHH----HH--HHh-
Confidence 357899999999999999999999888 899999987643222 22222222221100000 00 000
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCC-------------------CCHHHHHHHHHHHHH
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRK-------------------FSLKTVLMLADQMIA 140 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~-------------------~~~~~~~~i~~qil~ 140 (449)
...... ...+...++|+||+ +++|.+++...... .....+..++.||+.
T Consensus 198 ---------~~~~~~--~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~ 266 (566)
T PLN03225 198 ---------FLEPVS--SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILF 266 (566)
T ss_pred ---------hhcccc--cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHH
Confidence 000000 24567789999999 78898887643211 123456789999999
Q ss_pred HHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC------
Q 013125 141 RIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI------ 214 (449)
Q Consensus 141 ~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------ 214 (449)
||+|||++||+||||||+|||++ ++.+.+||+|||+|+........ ......+++.|+|||.+...
T Consensus 267 aL~yLH~~gIiHRDLKP~NILl~--~~~~~~KL~DFGlA~~l~~~~~~------~~~~~~~t~~Y~APE~~~~~~~~~~~ 338 (566)
T PLN03225 267 ALDGLHSTGIVHRDVKPQNIIFS--EGSGSFKIIDLGAAADLRVGINY------IPKEFLLDPRYAAPEQYIMSTQTPSA 338 (566)
T ss_pred HHHHHHHCCEEeCcCCHHHEEEe--CCCCcEEEEeCCCcccccccccc------CCcccccCCCccChHHhhccCCCCCC
Confidence 99999999999999999999994 24578999999999865433221 12456789999999976432
Q ss_pred ----------------CCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcC-----------CCHHH--
Q 013125 215 ----------------EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS-----------TPIEV-- 265 (449)
Q Consensus 215 ----------------~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~-----------~~~~~-- 265 (449)
.++.++|||||||++|||+++..++.... ..+..++..... .....
T Consensus 339 ~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 413 (566)
T PLN03225 339 PSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNL-----IQFNRQLKRNDYDLVAWRKLVEPRASPDLR 413 (566)
T ss_pred ccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHH-----HHHHHHHHhcCCcHHHHHHhhccccchhhh
Confidence 23456799999999999999876654311 111111111000 00000
Q ss_pred ----hhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 266 ----LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 266 ----~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
..........+|+..|+..||.+||++.++.+ +.++..
T Consensus 414 ~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~--Hpff~~ 455 (566)
T PLN03225 414 RGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALA--HPYFDR 455 (566)
T ss_pred hhhhhccccchHHHHHHHHHccCCcccCCCHHHHhC--CcCcCC
Confidence 00011233558999999999999999887754 344433
No 391
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=266.73 Aligned_cols=260 Identities=23% Similarity=0.322 Sum_probs=198.3
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHH--HcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKI--LQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
..++.+.||+|.||.||+|+. +++.||||++.. .....+.+|..|+.. ++|++++.++......
T Consensus 211 pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~-~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~----------- 276 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE-QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRG----------- 276 (534)
T ss_pred chhhHHHhhcCccceeehhhc--cCceeEEEecCH-HHHHHHHhHHHHHhccCccchhHHHhhchhccC-----------
Confidence 356788999999999999987 679999999875 344568888888876 5777766655432111
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---------CccccCC
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR---------GFLHRDI 155 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~---------giiHrDL 155 (449)
......++||++|. .|+|.++++ ...+++....+++.-|+.||+|||+. .|+||||
T Consensus 277 ------------t~~~~eywLVt~fh~kGsL~dyL~--~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDl 342 (534)
T KOG3653|consen 277 ------------TADRMEYWLVTEFHPKGSLCDYLK--ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDL 342 (534)
T ss_pred ------------CccccceeEEeeeccCCcHHHHHH--hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccc
Confidence 01244789999999 999999998 46799999999999999999999962 3999999
Q ss_pred CCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-C-----CccchHHHHHHHH
Q 013125 156 KPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-Q-----SRRDDLESLGYVL 229 (449)
Q Consensus 156 kp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-----s~~~DvwSlG~il 229 (449)
|..|||| ..+.++.|+|||+|.++....... ..-.-+||.+|||||++.+.- + -.+.||||+|.+|
T Consensus 343 kSkNVLv---K~DlTccIaDFGLAl~~~p~~~~~-----d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVL 414 (534)
T KOG3653|consen 343 KSKNVLV---KNDLTCCIADFGLALRLEPGKPQG-----DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVL 414 (534)
T ss_pred cccceEE---ccCCcEEeeccceeEEecCCCCCc-----chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHH
Confidence 9999999 488999999999999887433221 123578999999999998753 2 2368999999999
Q ss_pred HHHHhCC------------CCCCCChh--hcHHHHHHHHHHhhcCCCHHHhhccC--hHHHHHHHHHHhCCCCCCCCCHH
Q 013125 230 LYFLRGS------------LPWQGLKA--ATKKQKYDKICEKKVSTPIEVLCKSH--PAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 230 ~el~~G~------------~pf~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
|||++.- +||+..-+ ....+....++.++..+.++..|... ..-+++.++.||..|++.|.++.
T Consensus 415 WEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 415 WEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred HHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 9999742 33431111 11233334456677777777766544 46789999999999999999999
Q ss_pred HHHHHHHHHH
Q 013125 294 FLKRLFHDLF 303 (449)
Q Consensus 294 ~l~~~l~~~~ 303 (449)
-+.+++.++.
T Consensus 495 Cv~eR~~~l~ 504 (534)
T KOG3653|consen 495 CVEERMAELM 504 (534)
T ss_pred HHHHHHHHHh
Confidence 9988887663
No 392
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=8.7e-33 Score=257.06 Aligned_cols=220 Identities=17% Similarity=0.182 Sum_probs=169.5
Q ss_pred cCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCcCeeEEe
Q 013125 18 GSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWY 97 (449)
Q Consensus 18 G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 97 (449)
|.||.||+|++..+++.||+|++.... ....|...+....|+ +++.+..+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---~~~~~~~~~~~~~~~---------------------------~i~~~~~~ 53 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---EYSRERLTIIPHCVP---------------------------NMVCLHKY 53 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---hhhhHHHHHHhcCCC---------------------------ceeehhhh
Confidence 899999999999999999999886543 223343333333333 44445555
Q ss_pred cccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEee
Q 013125 98 GVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 176 (449)
Q Consensus 98 ~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~Df 176 (449)
+...+..|+||||+ +++|.+++.. ...+++..+..++.|++.||+|||++||+||||||+||++. .++.++|+||
T Consensus 54 ~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df 129 (237)
T cd05576 54 IVSEDSVFLVLQHAEGGKLWSHISK-FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYF 129 (237)
T ss_pred eecCCeEEEEEecCCCCCHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecc
Confidence 56778899999999 8899988865 34689999999999999999999999999999999999994 7788999999
Q ss_pred cceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHH
Q 013125 177 GLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 256 (449)
Q Consensus 177 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~ 256 (449)
|.+....... ....++..|+|||.+.+..++.++||||+||++|||++|..||...... ... .
T Consensus 130 ~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~~--~ 192 (237)
T cd05576 130 SRWSEVEDSC----------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----INT--H 192 (237)
T ss_pred cchhcccccc----------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----ccc--c
Confidence 9876544321 1334567899999998888999999999999999999999887642211 000 0
Q ss_pred hhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 257 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
.....| ...++.+++++..||+.||.+|++..
T Consensus 193 ~~~~~~-----~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 193 TTLNIP-----EWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred cccCCc-----ccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 011111 33578899999999999999999863
No 393
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.2e-33 Score=245.25 Aligned_cols=281 Identities=19% Similarity=0.320 Sum_probs=197.7
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHc-CCCcceeeEeecchhhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
.++|++.+++|+|-|++||.|....++++++||+++.- +...+.+|++||+.|. |+|++.++....+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-kkkKIkREikIL~nL~gg~NIi~L~DiV~D----------- 104 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-KKKKIKREIKILQNLRGGPNIIKLLDIVKD----------- 104 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-HHHHHHHHHHHHHhccCCCCeeehhhhhcC-----------
Confidence 46899999999999999999999999999999999863 3456899999999998 7777766544322
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
+......|++|+. ..+...++ ..++...++.++.|++.||.|+|+.||+|||+||.|+||.
T Consensus 105 --------------p~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId 166 (338)
T KOG0668|consen 105 --------------PESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID 166 (338)
T ss_pred --------------ccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec
Confidence 3445567899998 56666554 3578889999999999999999999999999999999995
Q ss_pred cCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCC-C
Q 013125 164 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQ-G 241 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~-~ 241 (449)
.....++|+|+|+|..+..... .+-.+.+..|-.||.+.... |+..-|+|||||++..|+..+.||. |
T Consensus 167 --h~~rkLrlIDWGLAEFYHp~~e--------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 167 --HELRKLRLIDWGLAEFYHPGKE--------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred --hhhceeeeeecchHhhcCCCce--------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC
Confidence 4567899999999987654332 23445567788999888765 8999999999999999999887775 5
Q ss_pred ChhhcHHHHHHHHHHhhc-CCCHHHhhccChHHHHHHHHHHhCC------CCCCCCCH-HHHHHHHHHHHHhcCCCCCcc
Q 013125 242 LKAATKKQKYDKICEKKV-STPIEVLCKSHPAEFASYFHYCQSL------TFDQRPDY-GFLKRLFHDLFSREGYDFDFV 313 (449)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~------~p~~Rp~~-~~l~~~l~~~~~~~~~~~~~~ 313 (449)
.++.+...++.++++... ..-.....-.+++++.+++..--.. +++.+--. .+..++|
T Consensus 237 ~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDll-------------- 302 (338)
T KOG0668|consen 237 HDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLL-------------- 302 (338)
T ss_pred CCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHH--------------
Confidence 555544444444433210 0000111112234444443221110 11111000 1122222
Q ss_pred cccccccccccccccccccCCCCccccCC
Q 013125 314 FDWTILKYQQTQKTKSQDLLPASRVTNSR 342 (449)
Q Consensus 314 ~dw~~l~~~~~~~~~~~~~~~~~~~~~~~ 342 (449)
| ++|.|+...|.++++++.|++|....
T Consensus 303 -d-klLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 303 -D-KLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred -H-HHHhhccccccchHHHhcCchHHHHH
Confidence 2 66788888999999999999886544
No 394
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.7e-32 Score=299.49 Aligned_cols=251 Identities=14% Similarity=0.196 Sum_probs=184.9
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
..|...+.||+|+||.||+|++..++..||+|.+..... ....|+++++.++|++++.+++.
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~l~~l~HpnIv~~~~~---------------- 751 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--IPSSEIADMGKLQHPNIVKLIGL---------------- 751 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--ccHHHHHHHhhCCCCCcceEEEE----------------
Confidence 346677899999999999999988999999998764332 23456888898988876665443
Q ss_pred cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCCCcEEe
Q 013125 87 TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVH---SRGFLHRDIKPDNFLM 162 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH---~~giiHrDLkp~Nill 162 (449)
+...+..|+||||+ +++|.+++. .+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 752 -----------~~~~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~ 816 (968)
T PLN00113 752 -----------CRSEKGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII 816 (968)
T ss_pred -----------EEcCCCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE
Confidence 34566789999999 899999885 3889999999999999999999 6799999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL 242 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~ 242 (449)
. ..+..++. ||.+..... .....+|..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 817 ~---~~~~~~~~-~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~ 881 (968)
T PLN00113 817 D---GKDEPHLR-LSLPGLLCT-----------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAE 881 (968)
T ss_pred C---CCCceEEE-ecccccccc-----------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcc
Confidence 3 55555554 665433211 12336789999999999999999999999999999999999999543
Q ss_pred hhhc-HHHHHHHHH------HhhcCCCHH---HhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 243 KAAT-KKQKYDKIC------EKKVSTPIE---VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 243 ~~~~-~~~~~~~i~------~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
.... ......... ......... ........++.+++..||..+|++||++.++.+.|+++.+.
T Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 882 FGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred cCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 2211 000000000 000000000 00001134678899999999999999999999999877553
No 395
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.98 E-value=1.7e-32 Score=249.25 Aligned_cols=285 Identities=22% Similarity=0.307 Sum_probs=211.1
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecC----CCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENS----GTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
+..||.-+..+|.|.- .|..|.|.-+++.||+|.... ....++..+|..++..++|.++++.+.........
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l--- 90 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTL--- 90 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccH---
Confidence 3468999999999999 899999999999999996442 23455689999999999999998877654433221
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.....+|+|||++..+|...+. -.++-.++..+++|+++|++|||+.||+||||||+||
T Consensus 91 ------------------~~~~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsni 149 (369)
T KOG0665|consen 91 ------------------EEFQEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNI 149 (369)
T ss_pred ------------------HHHHhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccc
Confidence 2335679999999999998886 3467789999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
++ +.++.+||.|||+|+.....- .....+.|..|+|||++.+-.|.+.+||||+||++.||++|...|.
T Consensus 150 vv---~~~~~lKi~dfg~ar~e~~~~--------~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 150 VV---NSDCTLKILDFGLARTEDTDF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred ee---cchhheeeccchhhcccCccc--------ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence 99 588999999999997543321 1345688999999999999999999999999999999999999999
Q ss_pred CChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcC---------CCCC
Q 013125 241 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG---------YDFD 311 (449)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~---------~~~~ 311 (449)
|..- ...+.++.+.... |-+.....+.+..+.++. .||.+.. -.+.+.+.... .+..
T Consensus 219 g~d~---idQ~~ki~~~lgt-pd~~F~~qL~~~~r~yv~--------~~~~y~~--~~f~~~fpD~~f~~~~e~~~~~~~ 284 (369)
T KOG0665|consen 219 GKDH---IDQWNKIIEQLGT-PDPSFMKQLQPTVRNYVE--------NRPQYQA--ISFSELFPDSLFPVVLEGSKLDCS 284 (369)
T ss_pred CchH---HHHHHHHHHHhcC-CCHHHHHHhhHHHHHHhh--------cChHhhc--cchhhhCCcccccccccCCccchH
Confidence 7443 3445555544433 333333344444444443 2222221 11222221110 1111
Q ss_pred --cccccccccccccccccccccCCCCccc
Q 013125 312 --FVFDWTILKYQQTQKTKSQDLLPASRVT 339 (449)
Q Consensus 312 --~~~dw~~l~~~~~~~~~~~~~~~~~~~~ 339 (449)
..+-++||..+|+.|.+.++++.||++.
T Consensus 285 ~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 285 LARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 1122488999999999999999999985
No 396
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=247.52 Aligned_cols=261 Identities=18% Similarity=0.286 Sum_probs=197.3
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCC-----ceEEEEEecCCCCch---hHHHHHHHHHHHcCCCcceeeEeecchh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTN-----EIVAVKIENSGTKHP---QLLYEAKVYKILQGGSKIRLVVFHVDHV 75 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~-----~~vAvKv~~~~~~~~---~~~~E~~~l~~l~~~~~~~~~~~~~~~~ 75 (449)
+-..|+++...+-+|.||.||.|.+.+.. +.|-+|.++.....- .++.|.-.+..+.|+|+....+++
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~---- 356 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS---- 356 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE----
Confidence 45678999999999999999999775432 345566555433222 245555555555666644443332
Q ss_pred hhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHh
Q 013125 76 IIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-------RKFSLKTVLMLADQMIARIEYVHS 147 (449)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~-------~~~~~~~~~~i~~qil~~L~~LH~ 147 (449)
..+....++++.+. -++|..++..|+ +.++..+...++.|++.|++|||+
T Consensus 357 ----------------------ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~ 414 (563)
T KOG1024|consen 357 ----------------------IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN 414 (563)
T ss_pred ----------------------eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh
Confidence 23456667778888 789999888553 357778889999999999999999
Q ss_pred CCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHH
Q 013125 148 RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGY 227 (449)
Q Consensus 148 ~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~ 227 (449)
+||||.||...|++| ++.-+|||+|=.+++.....++..- ......+..||++|.+.+..|+.++||||||+
T Consensus 415 ~~ViHkDiAaRNCvI---dd~LqVkltDsaLSRDLFP~DYhcL-----GDnEnRPvkWMslEal~n~~yssasDvWsfGV 486 (563)
T KOG1024|consen 415 HGVIHKDIAARNCVI---DDQLQVKLTDSALSRDLFPGDYHCL-----GDNENRPVKWMSLEALQNSHYSSASDVWSFGV 486 (563)
T ss_pred cCcccchhhhhccee---hhheeEEeccchhccccCccccccc-----CCCCCCcccccCHHHHhhhhhcchhhhHHHHH
Confidence 999999999999999 5889999999999997665543211 12333467899999999999999999999999
Q ss_pred HHHHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHh
Q 013125 228 VLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 305 (449)
Q Consensus 228 il~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 305 (449)
+||||+| |+.||...++.+....+.+ +.++..| -++|+++..+|..||.+.|++||+++++...|.++..+
T Consensus 487 llWELmtlg~~PyaeIDPfEm~~ylkd--GyRlaQP-----~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 487 LLWELMTLGKLPYAEIDPFEMEHYLKD--GYRLAQP-----FNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred HHHHHHhcCCCCccccCHHHHHHHHhc--cceecCC-----CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 9999999 9999988766543322211 2222333 45699999999999999999999999999999887554
No 397
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=4.2e-30 Score=238.16 Aligned_cols=236 Identities=26% Similarity=0.348 Sum_probs=184.7
Q ss_pred CceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCcCeeE
Q 013125 19 SFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIK 95 (449)
Q Consensus 19 ~fg~Vy~a~~~~~~~~vAvKv~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 95 (449)
+||.||+|.+..+++.||+|+...... .+.+.+|++.++.++|.+++...
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~--------------------------- 53 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLY--------------------------- 53 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHH---------------------------
Confidence 689999999988899999999876544 45788999999999887654432
Q ss_pred EecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEE
Q 013125 96 WYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 174 (449)
Q Consensus 96 ~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~ 174 (449)
.++......++++|++ +++|.+++.... .++...+..++.+++.+|.|||+.+++|+||+|+||++. +.+.++|+
T Consensus 54 ~~~~~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~ 129 (244)
T smart00220 54 DVFEDEDKLYLVMEYCDGGDLFDLLKKRG-RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLA 129 (244)
T ss_pred hheeeCCEEEEEEeCCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEc
Confidence 2334457889999999 559999887533 389999999999999999999999999999999999994 67899999
Q ss_pred eecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHH
Q 013125 175 DFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKI 254 (449)
Q Consensus 175 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i 254 (449)
|||.+........ .....++..|++||.+.+..++.++||||||+++|+|++|..||...... ......
T Consensus 130 d~~~~~~~~~~~~--------~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~~- 198 (244)
T smart00220 130 DFGLARQLDPGGL--------LTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFKK- 198 (244)
T ss_pred cccceeeeccccc--------cccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHH-
Confidence 9999987655421 23556788999999999888999999999999999999999999763221 112221
Q ss_pred HHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 255 CEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
........ ......++.++.+++..||..+|.+||++.++.+
T Consensus 199 ~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 199 IGKPKPPF-PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HhccCCCC-ccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 11111111 1111115789999999999999999999888754
No 398
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=5.5e-30 Score=258.96 Aligned_cols=208 Identities=22% Similarity=0.246 Sum_probs=144.8
Q ss_pred cccCCceEEeeeecccCceeEEEEEEc----------------CCCceEEEEEecCCCC--chhH--------------H
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHV----------------DTNEIVAVKIENSGTK--HPQL--------------L 50 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~----------------~~~~~vAvKv~~~~~~--~~~~--------------~ 50 (449)
++-.++|++.++||+|+||.||+|.+. ..++.||||.++.... ...+ .
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 456789999999999999999999752 2345799998764321 1122 2
Q ss_pred HHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCcCeeEEec--------ccCCeeEEEEecC-CCCHHHHHHH
Q 013125 51 YEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYG--------VDGEDNVLVLDLL-GPSLEDLFVY 121 (449)
Q Consensus 51 ~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~-g~sL~~~~~~ 121 (449)
.|+.++..+++.++... .+..+..+. ......+||+||+ +++|.+++..
T Consensus 221 vE~~~l~~l~~~~l~~~----------------------~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~ 278 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAA----------------------SCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDG 278 (507)
T ss_pred HHHHHHHHhhcccchhh----------------------hhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhh
Confidence 34555555555432111 011111111 1235679999999 8899888763
Q ss_pred hc-----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecc
Q 013125 122 CR-----------------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178 (449)
Q Consensus 122 ~~-----------------------~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGl 178 (449)
.. ..+++..++.++.|++.+|.|||+++|+||||||+|||+. .++.+||+|||+
T Consensus 279 ~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGl 355 (507)
T PLN03224 279 KLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGA 355 (507)
T ss_pred ccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcC
Confidence 21 1245678899999999999999999999999999999994 678999999999
Q ss_pred eeeecCCCCCccccccCCCCCCCCccccccccccCCCC----------------------CccchHHHHHHHHHHHHhCC
Q 013125 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ----------------------SRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 179 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~----------------------s~~~DvwSlG~il~el~~G~ 236 (449)
+.......... .....+|+.|++||++..... ..+.||||+||++|+|++|.
T Consensus 356 a~~~~~~~~~~------~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~ 429 (507)
T PLN03224 356 AVDMCTGINFN------PLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPE 429 (507)
T ss_pred ccccccCCccC------ccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCC
Confidence 97554322110 112234789999998764321 23479999999999999987
Q ss_pred C-CCCC
Q 013125 237 L-PWQG 241 (449)
Q Consensus 237 ~-pf~~ 241 (449)
+ ||.+
T Consensus 430 l~p~~~ 435 (507)
T PLN03224 430 LRPVAN 435 (507)
T ss_pred CCCccc
Confidence 5 7754
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-31 Score=257.04 Aligned_cols=194 Identities=23% Similarity=0.352 Sum_probs=166.0
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC----------CchhHHHHHHHHHHHc---CCCcceeeEeecch
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----------KHPQLLYEAKVYKILQ---GGSKIRLVVFHVDH 74 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~----------~~~~~~~E~~~l~~l~---~~~~~~~~~~~~~~ 74 (449)
.|..++.||+|+||.||+|.+++++..|+||.+.+.. +.-..-.|++||..|+ |+|++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIl--------- 632 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENIL--------- 632 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchh---------
Confidence 5999999999999999999999999999999876541 1112457999999998 65544
Q ss_pred hhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC--CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 013125 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL--GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLH 152 (449)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~--g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiH 152 (449)
++..|+++++++||+||-. |.+|.+++.. ...+++..++.|..|++.|+++||+.||||
T Consensus 633 ------------------KlLdfFEddd~yyl~te~hg~gIDLFd~IE~-kp~m~E~eAk~IFkQV~agi~hlh~~~ivh 693 (772)
T KOG1152|consen 633 ------------------KLLDFFEDDDYYYLETEVHGEGIDLFDFIEF-KPRMDEPEAKLIFKQVVAGIKHLHDQGIVH 693 (772)
T ss_pred ------------------hhhheeecCCeeEEEecCCCCCcchhhhhhc-cCccchHHHHHHHHHHHhccccccccCcee
Confidence 4455668889999999999 6678888875 567999999999999999999999999999
Q ss_pred cCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCC-CccchHHHHHHHHHH
Q 013125 153 RDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLESLGYVLLY 231 (449)
Q Consensus 153 rDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~~DvwSlG~il~e 231 (449)
||||-+|+++ +.+|.+||+|||.|....... ...++||..|+|||++.|..| +..-|||++|++||-
T Consensus 694 rdikdenviv---d~~g~~klidfgsaa~~ksgp---------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillyt 761 (772)
T KOG1152|consen 694 RDIKDENVIV---DSNGFVKLIDFGSAAYTKSGP---------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYT 761 (772)
T ss_pred cccccccEEE---ecCCeEEEeeccchhhhcCCC---------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeE
Confidence 9999999999 589999999999986554332 247899999999999999987 778899999999999
Q ss_pred HHhCCCCCCC
Q 013125 232 FLRGSLPWQG 241 (449)
Q Consensus 232 l~~G~~pf~~ 241 (449)
+++...||..
T Consensus 762 ivykenpyyn 771 (772)
T KOG1152|consen 762 IVYKENPYYN 771 (772)
T ss_pred EEeccCCCcC
Confidence 9999999874
No 400
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=266.63 Aligned_cols=245 Identities=22% Similarity=0.206 Sum_probs=180.3
Q ss_pred eeeecccCce-eEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHc-CCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 12 GRKIGSGSFG-EIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 12 ~~~LG~G~fg-~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
.+.+|.|+-| .||+|.. .++.||||.+-.. ..+...+|+++++.-. |+|+++
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e-~~~~A~rEi~lL~eSD~H~NviR----------------------- 567 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY--EGREVAVKRLLEE-FFDFAQREIQLLQESDEHPNVIR----------------------- 567 (903)
T ss_pred HHHcccCCCCcEEEEEee--CCceehHHHHhhH-hHHHHHHHHHHHHhccCCCceEE-----------------------
Confidence 4678899988 5899987 7889999976532 2335688999887653 333332
Q ss_pred CcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCC---HHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFS---LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~---~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
++....+..+.||+.|+|..+|.++++.....+. .-..+.++.|++.||++||+.+||||||||.||||...+
T Consensus 568 ----yyc~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~ 643 (903)
T KOG1027|consen 568 ----YYCSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS 643 (903)
T ss_pred ----EEeeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC
Confidence 2223345677899999999999999986322211 134577899999999999999999999999999997542
Q ss_pred --CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCCh
Q 013125 167 --KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLK 243 (449)
Q Consensus 167 --~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~ 243 (449)
...+++|+|||+++.+...... ++...+..||-+|+|||++.....+.++||+||||++|+.++ |..||....
T Consensus 644 ~~~~~ra~iSDfglsKkl~~~~sS----~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~ 719 (903)
T KOG1027|consen 644 ADGTLRAKISDFGLSKKLAGGKSS----FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL 719 (903)
T ss_pred CCcceeEEecccccccccCCCcch----hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH
Confidence 3457899999999987665432 344568899999999999999998999999999999999998 599998644
Q ss_pred hhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 244 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..+. .|+.....- ..+......+..+||..++..+|..||++.++..
T Consensus 720 ~R~~-----NIl~~~~~L--~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 720 ERQA-----NILTGNYTL--VHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred Hhhh-----hhhcCccce--eeeccCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence 3221 122111110 0000000127899999999999999999988743
No 401
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-30 Score=222.77 Aligned_cols=209 Identities=21% Similarity=0.279 Sum_probs=158.2
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
..-+..||+|+||.|=+.++..+|...|+|.+...-+. .++++|+.+...-
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~-------------------------- 101 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRT-------------------------- 101 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccC--------------------------
Confidence 34567899999999999999999999999987654332 2233343332211
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCcEE
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFL 161 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~---~~~~~~~~~~~~i~~qil~~L~~LH~~-giiHrDLkp~Nil 161 (449)
...+.++.|+.........+|.||.|..+|..+.+. .+..+++..+-+|+..+..||+|||++ .+||||+||+|||
T Consensus 102 ~~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiL 181 (282)
T KOG0984|consen 102 VDCPFTVHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNIL 181 (282)
T ss_pred CCCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEE
Confidence 111233333333346678899999999999887763 367799999999999999999999996 8999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC----CCCCccchHHHHHHHHHHHHhCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG----IEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
+ +..++||++|||++-.+.+.-. ...-.|...|||||.+.. ..|+.++||||||++++||.+++.
T Consensus 182 I---n~~GqVKiCDFGIsG~L~dSiA--------kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~ 250 (282)
T KOG0984|consen 182 I---NYDGQVKICDFGISGYLVDSIA--------KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRF 250 (282)
T ss_pred E---ccCCcEEEcccccceeehhhhH--------HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccc
Confidence 9 6899999999999976655432 123567789999998763 368999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHH
Q 013125 238 PWQGLKAATKKQKYDKICE 256 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~ 256 (449)
||.... ...+++..+++
T Consensus 251 PY~~w~--tpF~qLkqvVe 267 (282)
T KOG0984|consen 251 PYESWG--TPFQQLKQVVE 267 (282)
T ss_pred cccccC--CHHHHHHHHhc
Confidence 998643 33455555444
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=8.3e-31 Score=246.62 Aligned_cols=294 Identities=23% Similarity=0.303 Sum_probs=207.7
Q ss_pred cCCceEEeeeecccCceeEEEEEEcC---CCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVD---TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
+.+.|+++++||+|.|+.||+|.+.. .++.||+|-+.....-.++.+|+++|..+.+..
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~------------------ 95 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSD------------------ 95 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccch------------------
Confidence 45789999999999999999999976 788999998887777778999999999998876
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
++.++..+..+.+..++|+||+ -....+++. .++...++.+++.++.||+++|.+|||||||||.||
T Consensus 96 --------ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNF 163 (418)
T KOG1167|consen 96 --------NIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNF 163 (418)
T ss_pred --------hhhcchhhhccCCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccc
Confidence 4555666677889999999999 455556543 478999999999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceeeecCCC----------------CC---------------------ccccccCCCCCCCCc
Q 013125 161 LMGLGRKANQVYIIDFGLAKKYRDPT----------------TN---------------------RHIPYRENKNLTGTA 203 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~~~~~~----------------~~---------------------~~~~~~~~~~~~gt~ 203 (449)
|+. ...+.-.|+|||+|....... .+ ......+.....||+
T Consensus 164 L~n--~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~ 241 (418)
T KOG1167|consen 164 LYN--RRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTP 241 (418)
T ss_pred ccc--cccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCC
Confidence 996 456778899999997211000 00 000111234667999
Q ss_pred cccccccccCCC-CCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHh
Q 013125 204 RYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQ 282 (449)
Q Consensus 204 ~y~aPE~~~~~~-~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l 282 (449)
+|+|||++.+.+ .+.++||||.|+|+.-+++++.||....+. ...+.+|+.......+.. .+.+....+
T Consensus 242 GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd--~~al~ei~tifG~~~mrk--------~A~l~g~~~ 311 (418)
T KOG1167|consen 242 GFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDD--ADALAEIATIFGSAEMRK--------CAALPGRIL 311 (418)
T ss_pred CCCchHHHhhccCcCCccceeeccceeehhhccccccccCccc--cchHHHHHHHhChHHHHH--------HhhcCCcee
Confidence 999999999876 799999999999999999999999754332 122223222222222111 122222211
Q ss_pred CCCCCCCCCHHHHHHHHHHHH-HhcC---------CCCCcc-----ccc--ccccccccccccccccCCCCcccc
Q 013125 283 SLTFDQRPDYGFLKRLFHDLF-SREG---------YDFDFV-----FDW--TILKYQQTQKTKSQDLLPASRVTN 340 (449)
Q Consensus 283 ~~~p~~Rp~~~~l~~~l~~~~-~~~~---------~~~~~~-----~dw--~~l~~~~~~~~~~~~~~~~~~~~~ 340 (449)
-+.++.+|+..++...++.+. ..-. ..+.+. +|. +.+..+|.+|.++.+++.|+.+..
T Consensus 312 l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 312 LWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred eeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 122244666555555444441 1100 011111 121 557789999999999999999883
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.4e-30 Score=228.41 Aligned_cols=248 Identities=21% Similarity=0.318 Sum_probs=177.2
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+.+.|.|.+.||+|.||.+-+|++..++..+++|.+... .....|.+|...--.|.++. |
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~----------h--------- 82 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQ----------H--------- 82 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccch----------h---------
Confidence 347899999999999999999999999999999976543 33445666653322222111 0
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
-+-.+...+...+.+++++||+ .|+|..-+.. ..+-+...+.++.|++.||+|||++++||||||.+||||
T Consensus 83 ------Ii~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLi 154 (378)
T KOG1345|consen 83 ------IIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILI 154 (378)
T ss_pred ------hhHHHHHHhhcCceEEEeeccCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEE
Confidence 1111223345566888999999 8888876653 457788889999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-----CCCccchHHHHHHHHHHHHhCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-----EQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~~DvwSlG~il~el~~G~~ 237 (449)
-.. +..+|||+|||+++.....- .-+.-+..|.+||+.... ...+..|+|.||+++|.++||.+
T Consensus 155 f~~-df~rvKlcDFG~t~k~g~tV----------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~ 223 (378)
T KOG1345|consen 155 FDA-DFYRVKLCDFGLTRKVGTTV----------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKF 223 (378)
T ss_pred ecC-CccEEEeeecccccccCcee----------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCC
Confidence 654 44599999999987543211 122335678888865422 24678999999999999999999
Q ss_pred CCCCChhhcH-HHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 238 PWQGLKAATK-KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 238 pf~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
||+.....+. ...+.+-. .+.....+...+.+.+.+..++.+-+..++.+|--
T Consensus 224 PWQka~~~d~~Y~~~~~w~-~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drck 277 (378)
T KOG1345|consen 224 PWQKASIMDKPYWEWEQWL-KRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCK 277 (378)
T ss_pred cchhhhccCchHHHHHHHh-cccCccCchhhcccCHHHHHHHHHhcCCcccccch
Confidence 9995333221 11222222 23333455556667788999999999999999943
No 404
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=9e-28 Score=217.04 Aligned_cols=207 Identities=30% Similarity=0.443 Sum_probs=175.2
Q ss_pred ecccCceeEEEEEEcCCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCc
Q 013125 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGI 91 (449)
Q Consensus 15 LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 91 (449)
||+|++|.||++.+..+++.+++|+....... ..+.+|++.++.+++.+ +
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~---------------------------i 53 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPN---------------------------I 53 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCC---------------------------e
Confidence 68999999999999888999999998876543 67899999999998754 4
Q ss_pred CeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCC-CC
Q 013125 92 PNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK-AN 169 (449)
Q Consensus 92 ~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~-~~ 169 (449)
+.+..++......++++|++ +++|.+++......++...+..++.+++.+|.+||++|++|+||+|.||++. . .+
T Consensus 54 ~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~---~~~~ 130 (215)
T cd00180 54 VKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLD---SDNG 130 (215)
T ss_pred eeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEe---CCCC
Confidence 44555555667889999999 5999999876445789999999999999999999999999999999999994 5 68
Q ss_pred eEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCC-CCCccchHHHHHHHHHHHHhCCCCCCCChhhcHH
Q 013125 170 QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKK 248 (449)
Q Consensus 170 ~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~ 248 (449)
.++|+|||.+........ ......+...|++||.+... ..+.+.|+|++|+++++|
T Consensus 131 ~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------- 187 (215)
T cd00180 131 KVKLADFGLSKLLTSDKS-------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------- 187 (215)
T ss_pred cEEEecCCceEEccCCcc-------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------
Confidence 999999999987654431 01245577889999999887 788999999999999999
Q ss_pred HHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 249 QKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..+.+++..|+..+|++||++.++.+
T Consensus 188 -----------------------~~~~~~l~~~l~~~p~~R~~~~~l~~ 213 (215)
T cd00180 188 -----------------------PELKDLIRKMLQKDPEKRPSAKEILE 213 (215)
T ss_pred -----------------------HHHHHHHHHHhhCCcccCcCHHHHhh
Confidence 46889999999999999999887754
No 405
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=3e-30 Score=254.01 Aligned_cols=249 Identities=18% Similarity=0.259 Sum_probs=199.4
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.++|.++.++|+|.||.||+|+++.+++..|+|+++... +...+..|+-+++..+|+|++-+++..
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsy------------ 81 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSY------------ 81 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhh------------
Confidence 578999999999999999999999999999999988653 344567888888888888877655432
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
...+..+++|||| ||+|.++..- ...+++.++....++.+.||+|||++|-+|||||-.|||+
T Consensus 82 ---------------lr~dklwicMEycgggslQdiy~~-TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill 145 (829)
T KOG0576|consen 82 ---------------LRRDKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL 145 (829)
T ss_pred ---------------hhhcCcEEEEEecCCCcccceeee-cccchhHHHHHHHhhhhccchhhhcCCcccccccccceee
Confidence 3456789999999 8888887653 5678999999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccc---cCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTH---LGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
+ +.+.+||.|||.+-.+...-. ..+.+.||+.|||||+- +...|...+|||++|++..|+..-++|.
T Consensus 146 t---d~gDvklaDfgvsaqitati~-------KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqppl 215 (829)
T KOG0576|consen 146 T---DEGDVKLADFGVSAQITATIA-------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPL 215 (829)
T ss_pred c---ccCceeecccCchhhhhhhhh-------hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcc
Confidence 5 889999999999876654432 24688999999999964 4667999999999999999999988887
Q ss_pred CCChhhcHHHHHHHHHHhhcCCCHH-HhhccChHHHHHHHHHHhCCCCCCCCCHHHHH
Q 013125 240 QGLKAATKKQKYDKICEKKVSTPIE-VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 296 (449)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~ 296 (449)
....+.... .++.+-...|+. .-...+.+.|.++++.|+..+|.+||+.+.+.
T Consensus 216 fdlhpmr~l----~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 216 FDLHPMRAL----FLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred cccchHHHH----HHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 665443211 122222222222 22234578899999999999999999987653
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=5.3e-27 Score=215.23 Aligned_cols=197 Identities=32% Similarity=0.490 Sum_probs=163.0
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
|.+.+.||.|+||.||+|.+..+++.||+|++.... ....+.+|++.++.+++.+++..
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~------------------ 62 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKL------------------ 62 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhh------------------
Confidence 678999999999999999998889999999987653 34467889999988877654433
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~ 164 (449)
..+.......++++|++ +++|.+++......++...+..++.|++.+|.+||+++++|+||+|.||++.
T Consensus 63 ---------~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~- 132 (225)
T smart00221 63 ---------YGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG- 132 (225)
T ss_pred ---------eeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-
Confidence 33344557889999999 5699998876433389999999999999999999999999999999999994
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccc-cCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTH-LGIEQSRRDDLESLGYVLLYFLRGSLPWQG 241 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~s~~~DvwSlG~il~el~~G~~pf~~ 241 (449)
..+.++|+|||++......... ......++..|++||.+ ....++.++|+|+||++++||++|+.||..
T Consensus 133 --~~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 133 --MDGLVKLADFGLARFIHRDLAA------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred --CCCCEEEeeCceeeEecCcccc------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 6689999999999877654310 11345678889999998 666788899999999999999999999965
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=2.8e-26 Score=203.12 Aligned_cols=166 Identities=17% Similarity=0.183 Sum_probs=127.4
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCcccc
Q 013125 113 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 192 (449)
Q Consensus 113 ~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~ 192 (449)
|+|.+++...+..+++.+++.++.||+.||.|||+++ ||+|||+ +.++.+++ ||++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPE------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeeccc-------
Confidence 6888988876677999999999999999999999998 9999999 47788888 9999765432
Q ss_pred ccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHH--HhhccC
Q 013125 193 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE--VLCKSH 270 (449)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~ 270 (449)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+..+.......... ......
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 135 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPADDPRDRSNLESV 135 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhccCCccccccHHHH
Confidence 2257899999999999999999999999999999999999997643321 2222222221111000 001112
Q ss_pred hH--HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Q 013125 271 PA--EFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 303 (449)
Q Consensus 271 ~~--~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~ 303 (449)
+. ++.+++..||..+|.+||++.++.+.+....
T Consensus 136 ~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 136 SAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 23 6999999999999999999999887665543
No 408
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=2.3e-26 Score=249.14 Aligned_cols=187 Identities=14% Similarity=0.173 Sum_probs=134.5
Q ss_pred CeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeec----------------C
Q 013125 102 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL----------------G 165 (449)
Q Consensus 102 ~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~----------------~ 165 (449)
..+++++|+++++|.+++......++..+++.+++||+.||+|||++||+||||||+||||+. .
T Consensus 53 ~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 53 DSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred chhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 457788999999999999765667999999999999999999999999999999999999942 1
Q ss_pred CCCCeEEEEeecceeeecCCC--------CCcccccc-CCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCC
Q 013125 166 RKANQVYIIDFGLAKKYRDPT--------TNRHIPYR-ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~--------~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
+..+.+|++|||+++...... .....|+. ......||+.|+|||++.+..|+.++|||||||+||||++|.
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~ 212 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPV 212 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCC
Confidence 234556777777775422100 00000100 011346899999999999999999999999999999999998
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
+|+..... .+..+..... +. ..... .+....++..||..+|.+||++.++.+
T Consensus 213 ~~~~~~~~-----~~~~~~~~~~--~~-~~~~~-~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 213 SSREEKSR-----TMSSLRHRVL--PP-QILLN-WPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred CchhhHHH-----HHHHHHHhhc--Ch-hhhhc-CHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 88754211 1111211111 11 11111 345678889999999999999998854
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=8e-25 Score=212.61 Aligned_cols=171 Identities=18% Similarity=0.197 Sum_probs=128.7
Q ss_pred cccCCceEEeeeecccCceeEEEEEEcC-CCceEEEEEecCCC-----C--chhHHHHHHHHHHHcCCCcceeeEeecch
Q 013125 3 RIIGVKYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGT-----K--HPQLLYEAKVYKILQGGSKIRLVVFHVDH 74 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~G~fg~Vy~a~~~~-~~~~vAvKv~~~~~-----~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 74 (449)
+.+.++|++.+.||+|+||+||+|++.. +++.||||+..... . ...+.+|+++++.++|++++.
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~-------- 85 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVP-------- 85 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCc--------
Confidence 5678899999999999999999999876 67778999865321 1 234789999999999887443
Q ss_pred hhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 013125 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHR 153 (449)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHr 153 (449)
.+..+ ...||||||+ |++|.. +. ... ...++.|++.+|.|||++||+||
T Consensus 86 ------------------~l~~~----~~~~LVmE~~~G~~L~~-~~----~~~---~~~~~~~i~~aL~~lH~~gIiHr 135 (365)
T PRK09188 86 ------------------QLLAT----GKDGLVRGWTEGVPLHL-AR----PHG---DPAWFRSAHRALRDLHRAGITHN 135 (365)
T ss_pred ------------------EEEEc----CCcEEEEEccCCCCHHH-hC----ccc---hHHHHHHHHHHHHHHHHCCCeeC
Confidence 22222 3469999999 777752 21 111 14678999999999999999999
Q ss_pred CC-CCCcEEeecCCCCCeEEEEeecceeeecCCCCCcccc-ccCCCCCCCCccccccccccCC
Q 013125 154 DI-KPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP-YRENKNLTGTARYASCNTHLGI 214 (449)
Q Consensus 154 DL-kp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~ 214 (449)
|| ||+|||++ .++.+||+|||+|+.+........+. +..-....++..|++||.+...
T Consensus 136 DL~KP~NILv~---~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 136 DLAKPQNWLMG---PDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CCCCcceEEEc---CCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99 99999994 66789999999999876654332221 1222466788899999988743
No 410
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=2.6e-24 Score=226.58 Aligned_cols=258 Identities=23% Similarity=0.326 Sum_probs=192.2
Q ss_pred ccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 4 i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
+-+..|.|.+.||+|+||.||+|.+.+ ++.||||+.+....++ ++.=.+++.+|+ +....
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-fYI~~q~~~RLk-~~~~~----------------- 754 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-FYICLQVMERLK-PQMLP----------------- 754 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-eeehHHHHHhhc-hhhhc-----------------
Confidence 457889999999999999999999876 9999999998766553 444456777777 22111
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
.+..+..+-...+..+||+||. .|+|.+++. ..+.+++..++.+..||+..+++||.++|||+||||+|+|+
T Consensus 755 ------~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll 827 (974)
T KOG1166|consen 755 ------SIMHISSAHVFQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLL 827 (974)
T ss_pred ------chHHHHHHHccCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEe
Confidence 1111112223556779999999 999999988 35668999999999999999999999999999999999999
Q ss_pred ecC----CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC
Q 013125 163 GLG----RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 163 ~~~----~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p 238 (449)
.+. .+...++|+|||.|..+.--..+.. -+..++|-.+-++|+..|.+|++.+|.|.|+.+++-|+.|+..
T Consensus 828 ~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~-----F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 828 RREICADSDSKGLYLIDFGRSIDMKLFPDGTK-----FKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ecccCCCCcccceEEEecccceeeeEcCCCcE-----EeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 752 2356799999999987654333221 2467889999999999999999999999999999999998532
Q ss_pred CCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhc
Q 013125 239 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 306 (449)
Q Consensus 239 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 306 (449)
= ..+.. ........+.+++ -.-+.+++..+|..+-..-|...+|+..|++.+.+.
T Consensus 903 q--~~~g~---------~~~~~~~~~Ry~~--~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~ 957 (974)
T KOG1166|consen 903 E--VKNGS---------SWMVKTNFPRYWK--RDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEH 957 (974)
T ss_pred H--hcCCc---------ceeccccchhhhh--HHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHH
Confidence 1 00000 0000111222222 134778888888877777788999999988887654
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=2.9e-22 Score=193.18 Aligned_cols=255 Identities=30% Similarity=0.433 Sum_probs=185.4
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCC-cceeeEeecchhhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGS-KIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~~ 82 (449)
|.+.+.||.|+||.||++.+. ..+++|++..... ...+.+|+.++..+.+.. ++..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~--------------- 63 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKL--------------- 63 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeE---------------
Confidence 789999999999999999986 7789998776533 335788999999888774 3333
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR--RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDN 159 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~--~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~N 159 (449)
...+......+++++++ ++++.+++.... ..+....+..++.|++.+++|+|+.+++|||+||+|
T Consensus 64 ------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~n 131 (384)
T COG0515 64 ------------YDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPEN 131 (384)
T ss_pred ------------EEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence 22233444579999999 788886666433 268999999999999999999999999999999999
Q ss_pred EEeecCCCCC-eEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC---CCCCccchHHHHHHHHHHHHhC
Q 013125 160 FLMGLGRKAN-QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG---IEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 160 ill~~~~~~~-~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~~DvwSlG~il~el~~G 235 (449)
|++. ... .++++|||+++............ .......||..|++||.+.+ ..++...|+||+|++++++++|
T Consensus 132 il~~---~~~~~~~l~dfg~~~~~~~~~~~~~~~-~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~ 207 (384)
T COG0515 132 ILLD---RDGRVVKLIDFGLAKLLPDPGSTSSIP-ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTG 207 (384)
T ss_pred eeec---CCCCeEEEeccCcceecCCCCcccccc-ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhC
Confidence 9994 455 79999999998655443211000 12357789999999999988 5789999999999999999999
Q ss_pred CCCCCCChhh-cHHHHHHHHHHhhcCCCHHHhhcc----ChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 236 SLPWQGLKAA-TKKQKYDKICEKKVSTPIEVLCKS----HPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 236 ~~pf~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
..||...... ........+............... ....+.+++..++..+|..|.+......
T Consensus 208 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 208 LPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred CCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 9998765431 011122212111111000011111 1257889999999999999988765433
No 412
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=7.9e-23 Score=182.77 Aligned_cols=136 Identities=20% Similarity=0.236 Sum_probs=101.8
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----------chhH-----------------HHHHHHHHHHcCCC
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----------HPQL-----------------LYEAKVYKILQGGS 63 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----------~~~~-----------------~~E~~~l~~l~~~~ 63 (449)
.+.||+|+||.||+|.+. +|+.||||+++.... ..++ ..|++++..+.+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 578999999999999986 899999999875421 1111 24888888887653
Q ss_pred cceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 013125 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP-SLEDLFVYCRRKFSLKTVLMLADQMIARI 142 (449)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~-sL~~~~~~~~~~~~~~~~~~i~~qil~~L 142 (449)
+. .|.... . ...+|||||+++ ++...... ...++...+..++.|++.+|
T Consensus 81 v~-------------------------~p~~~~--~--~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L 130 (190)
T cd05147 81 IP-------------------------CPEPIL--L--KSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIM 130 (190)
T ss_pred CC-------------------------CCcEEE--e--cCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHH
Confidence 21 111111 1 223899999954 44433222 45789999999999999999
Q ss_pred HHH-HhCCccccCCCCCcEEeecCCCCCeEEEEeecceeee
Q 013125 143 EYV-HSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182 (449)
Q Consensus 143 ~~L-H~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~ 182 (449)
++| |++||+||||||+|||+. ++.++|+|||+|...
T Consensus 131 ~~l~H~~giiHrDlkP~NIli~----~~~v~LiDFG~a~~~ 167 (190)
T cd05147 131 RILYQDCRLVHADLSEYNLLYH----DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHHHhCCcccCCCCHHHEEEE----CCcEEEEEccccccC
Confidence 999 799999999999999994 478999999999644
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.89 E-value=3.8e-23 Score=187.17 Aligned_cols=179 Identities=16% Similarity=0.172 Sum_probs=127.3
Q ss_pred CcccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchh-----------HHHHHHHHHHHcCCCcceeeEe
Q 013125 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-----------LLYEAKVYKILQGGSKIRLVVF 70 (449)
Q Consensus 2 ~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~-----------~~~E~~~l~~l~~~~~~~~~~~ 70 (449)
..+++++|++.+.||.|+||.||++.+ ++..+|||++.......+ +.+|++.+..+.|+++......
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~ 103 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF 103 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence 468899999999999999999999765 466899999875432221 4688889999988865443221
Q ss_pred ecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 013125 71 HVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRG 149 (449)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~g 149 (449)
... ............+|||||+ |.+|.++.. ++. ....+++.+|..||+.|
T Consensus 104 ~~~-------------------~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~g 155 (232)
T PRK10359 104 YLL-------------------AERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQHG 155 (232)
T ss_pred eee-------------------cccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHcC
Confidence 100 0000011234679999999 678877632 232 34669999999999999
Q ss_pred ccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHH
Q 013125 150 FLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVL 229 (449)
Q Consensus 150 iiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il 229 (449)
++|||+||+||+++ .++ ++|+|||.+........ .-...+...++.++|+|||||++
T Consensus 156 i~H~Dikp~Nili~---~~g-i~liDfg~~~~~~e~~a-------------------~d~~vler~y~~~~di~~lg~~~ 212 (232)
T PRK10359 156 MVSGDPHKGNFIVS---KNG-LRIIDLSGKRCTAQRKA-------------------KDRIDLERHYGIKNEIKDLGYYL 212 (232)
T ss_pred CccCCCChHHEEEe---CCC-EEEEECCCcccccchhh-------------------HHHHHHHhHhcccccccceeEee
Confidence 99999999999995 455 99999998764432211 01134444567799999999998
Q ss_pred HHHH
Q 013125 230 LYFL 233 (449)
Q Consensus 230 ~el~ 233 (449)
..+.
T Consensus 213 ~~~~ 216 (232)
T PRK10359 213 LIYK 216 (232)
T ss_pred hHHH
Confidence 8665
No 414
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.89 E-value=7.3e-23 Score=190.80 Aligned_cols=249 Identities=22% Similarity=0.243 Sum_probs=149.1
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.+..++.||.|+|+.||.|+|..|++.+|+|+.....+ .+.+.+|.-....+.+...... ....+..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~--------a~~~~r~ 84 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKE--------AYRHLRF 84 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHH--------HHHHH-B
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHH--------HHHhceE
Confidence 45778999999999999999999999999998654432 1123333322222222110000 0000000
Q ss_pred hhcc---cCCCcCeeEEecccCCe-----eEEEEecCCCCHHHHHHHh---cCC---CCHHHHHHHHHHHHHHHHHHHhC
Q 013125 83 IFSS---TLGGIPNIKWYGVDGED-----NVLVLDLLGPSLEDLFVYC---RRK---FSLKTVLMLADQMIARIEYVHSR 148 (449)
Q Consensus 83 ~~~~---~~~~i~~~~~~~~~~~~-----~~lv~e~~g~sL~~~~~~~---~~~---~~~~~~~~i~~qil~~L~~LH~~ 148 (449)
+.-. ...+.+.+..-...... .+++|+.+.++|.+++... ... +.....+.+..|++..+++||+.
T Consensus 85 l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~ 164 (288)
T PF14531_consen 85 LVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY 164 (288)
T ss_dssp ---SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeeeEEEEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc
Confidence 0000 11122223222222222 3778888899998887632 111 22233355568999999999999
Q ss_pred CccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccC--------CCCCccc
Q 013125 149 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG--------IEQSRRD 220 (449)
Q Consensus 149 giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~~~ 220 (449)
|++|+||+|+|+++ +.+|.++|+||+.......... ....+..|.+||.... ..++.+.
T Consensus 165 GlVHgdi~~~nfll---~~~G~v~Lg~F~~~~r~g~~~~----------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~ 231 (288)
T PF14531_consen 165 GLVHGDIKPENFLL---DQDGGVFLGDFSSLVRAGTRYR----------CSEFPVAFTPPELESCAGQFGQNNAPYTFAT 231 (288)
T ss_dssp TEEEST-SGGGEEE----TTS-EEE--GGGEEETTEEEE----------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHH
T ss_pred ceEecccceeeEEE---cCCCCEEEcChHHHeecCceee----------ccCCCcccCChhhhhhhcccCcccceeeecc
Confidence 99999999999999 4889999999987765432111 1233467889996643 3578999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCC
Q 013125 221 DLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQR 289 (449)
Q Consensus 221 DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R 289 (449)
|.|+||+++|.|++|..||........... .-..|.+.|+.++.||..+|+.+|.+|
T Consensus 232 DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 232 DAWQLGITLYSLWCGRLPFGLSSPEADPEW------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHHHHHHHSS-STCCCGGGSTSGG------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred CHHHHHHHHHHHHHccCCCCCCCccccccc------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 999999999999999999987544321110 122455779999999999999999887
No 415
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=2.4e-23 Score=215.11 Aligned_cols=254 Identities=20% Similarity=0.261 Sum_probs=179.7
Q ss_pred EEeeeecccCceeEEEEEEcCCCceEEEEEecC---CCCchh-----HHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENS---GTKHPQ-----LLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 10 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~---~~~~~~-----~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
...+.+|.|++|.|+.+......+.++.|.... ...... +..|..+-..|.|++++..+.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~------------ 388 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLD------------ 388 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHH------------
Confidence 457789999999888888766666566654331 111111 122333333344544322111
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
.+ .+.....-+||||..+|..++.. ...++...+..++.|++.|++|||+.||.|||||++|++
T Consensus 389 --------------~~-~~~~~~~~~mE~~~~Dlf~~~~~-~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll 452 (601)
T KOG0590|consen 389 --------------IV-QEIDGILQSMEYCPYDLFSLVMS-NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLL 452 (601)
T ss_pred --------------HH-hhcccchhhhhcccHHHHHHHhc-ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEE
Confidence 01 11112222399995588888764 347899999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCc-cchHHHHHHHHHHHHhCCCCCC
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSR-RDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~-~~DvwSlG~il~el~~G~~pf~ 240 (449)
+. ..+.+||+|||.+..+..+.... .......+|+..|+|||++.+..|.+ .+||||.|++++.|.+|+.||.
T Consensus 453 ~~---~~g~lki~Dfg~~~vf~~~~e~~---~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk 526 (601)
T KOG0590|consen 453 VT---ENGILKIIDFGAASVFRYPWEKN---IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWK 526 (601)
T ss_pred Ee---cCCceEEeecCcceeeccCcchh---hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccc
Confidence 95 77899999999998877655431 12345889999999999999999865 5899999999999999999998
Q ss_pred CChhhcHH-HHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 241 GLKAATKK-QKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 241 ~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.....+.. .................+...+|...+.+|..+|+++|.+|.++++|.+
T Consensus 527 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 527 VAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 65443322 1111112223334445566677899999999999999999999888755
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=2.6e-21 Score=173.46 Aligned_cols=138 Identities=22% Similarity=0.258 Sum_probs=102.7
Q ss_pred EeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc----------------------------hhHHHHHHHHHHHcCC
Q 013125 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----------------------------PQLLYEAKVYKILQGG 62 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~----------------------------~~~~~E~~~l~~l~~~ 62 (449)
+.+.||+|+||.||+|.+. +|+.||||++...... ....+|.+.+..+.+.
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 8999999998764211 0124567777777655
Q ss_pred CcceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 013125 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP-SLEDLFVYCRRKFSLKTVLMLADQMIAR 141 (449)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~-sL~~~~~~~~~~~~~~~~~~i~~qil~~ 141 (449)
++ .+|....+. ..||||||+++ ++...... ...++...+..++.|++.+
T Consensus 80 ~i-------------------------~~p~~~~~~----~~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~ 129 (190)
T cd05145 80 GV-------------------------PVPEPILLK----KNVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQ 129 (190)
T ss_pred CC-------------------------CCceEEEec----CCEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHH
Confidence 32 122222221 24899999944 34332221 3467888999999999999
Q ss_pred HHHHHh-CCccccCCCCCcEEeecCCCCCeEEEEeecceeeec
Q 013125 142 IEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183 (449)
Q Consensus 142 L~~LH~-~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~ 183 (449)
|.+||. +||+||||||+|||+. ++.++|+|||+|....
T Consensus 130 l~~lH~~~givHrDlkP~NIll~----~~~~~liDFG~a~~~~ 168 (190)
T cd05145 130 MRRLYQEAGLVHGDLSEYNILYH----DGKPYIIDVSQAVELD 168 (190)
T ss_pred HHHHHHhCCEecCCCChhhEEEE----CCCEEEEEcccceecC
Confidence 999999 9999999999999993 6789999999997654
No 417
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.86 E-value=1.1e-22 Score=201.20 Aligned_cols=244 Identities=23% Similarity=0.338 Sum_probs=184.4
Q ss_pred ecccCceeEEEEEEc---CCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 15 IGSGSFGEIFLASHV---DTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 15 LG~G~fg~Vy~a~~~---~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
+|.|+||.|+++... +.+..+|+|+.+.... ......|..++...+.+.
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~------------------------ 57 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTP------------------------ 57 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCC------------------------
Confidence 799999999998643 4567799998765422 113455666666665332
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
.+..+.+........++++++. |+.|...... ...+....+..+...++.+++++|..||+|||+|++||++ +
T Consensus 58 --f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d 131 (612)
T KOG0603|consen 58 --FLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---L 131 (612)
T ss_pred --ceeeeeeeeccccchhHhhhhcccchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---c
Confidence 4455556667778889999999 6677665543 5668888999999999999999999999999999999999 5
Q ss_pred CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCCCChhhc
Q 013125 167 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT 246 (449)
Q Consensus 167 ~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~~~~~~~ 246 (449)
..|++++.|||+++...... ..+||..|||||++. ....++|.||||++++||++|-.||.+
T Consensus 132 ~~Ghi~~tdfglske~v~~~-----------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----- 193 (612)
T KOG0603|consen 132 LEGHIKLTDFGLSKEAVKEK-----------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----- 193 (612)
T ss_pred ccCccccCCchhhhHhHhhh-----------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----
Confidence 88999999999998765543 228999999999999 456789999999999999999999987
Q ss_pred HHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHHHhcCCCCCccccccccc
Q 013125 247 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYG--FLKRLFHDLFSREGYDFDFVFDWTILK 320 (449)
Q Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~--~l~~~l~~~~~~~~~~~~~~~dw~~l~ 320 (449)
+....|.......|... ....++++.+++..+|..|.-.. -+.+. ....+....||..++
T Consensus 194 --~~~~~Il~~~~~~p~~l-----~~~a~~~~~~l~~r~p~nrLg~~~~~~~ei-------k~h~f~~~i~~~~l~ 255 (612)
T KOG0603|consen 194 --DTMKRILKAELEMPREL-----SAEARSLFRQLFKRNPENRLGAGPDGVDEI-------KQHEFFQSIDWNELE 255 (612)
T ss_pred --HHHHHHhhhccCCchhh-----hHHHHHHHHHHHhhCHHHHhccCcchhHHH-------hccchheeeeHhhHh
Confidence 34455666566666433 56889999999999999886542 22222 123445566776443
No 418
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.86 E-value=8.3e-22 Score=204.12 Aligned_cols=216 Identities=24% Similarity=0.387 Sum_probs=153.6
Q ss_pred CCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
-..|..++.|..|+||.||+++|..+.+.+|+|+-+. + - |++. +..
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq-~---l------ilRn-----ilt------------------- 127 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ-N---L------ILRN-----ILT------------------- 127 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhccccc-c---h------hhhc-----ccc-------------------
Confidence 3578999999999999999999999999999975321 1 1 1211 000
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 165 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~ 165 (449)
..+..+.| |+-..+++. -+.++. +++.+++|||+.||+|||+||+|.+|+
T Consensus 128 --------------~a~npfvv-----gDc~tllk~-~g~lPv--------dmvla~Eylh~ygivhrdlkpdnllIT-- 177 (1205)
T KOG0606|consen 128 --------------FAGNPFVV-----GDCATLLKN-IGPLPV--------DMVLAVEYLHSYGIVHRDLKPDNLLIT-- 177 (1205)
T ss_pred --------------ccCCccee-----chhhhhccc-CCCCcc--------hhhHHhHhhccCCeecCCCCCCcceee--
Confidence 00111122 333333332 122332 237789999999999999999999996
Q ss_pred CCCCeEEEEeecceeeecCCCCC----cccc----ccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCC
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTN----RHIP----YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSL 237 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~----~~~~----~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~ 237 (449)
.-+++|+.|||+++......+. .+|. --..+.++||+.|.|||++....|+..+|+|++|+|+||++.|..
T Consensus 178 -~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcv 256 (1205)
T KOG0606|consen 178 -SMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCV 256 (1205)
T ss_pred -ecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeee
Confidence 7899999999999753222111 1110 012457899999999999999999999999999999999999999
Q ss_pred CCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCC
Q 013125 238 PWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 291 (449)
Q Consensus 238 pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~ 291 (449)
||.+..+. +.+..++......|-. ....+++.++++.++|..+|-.|.-
T Consensus 257 pffGdtpe---elfg~visd~i~wpE~--dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 257 PFFGDTPE---ELFGQVISDDIEWPEE--DEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred eccCCCHH---HHHhhhhhhhcccccc--CcCCCHHHHHHHHHHHHhChHhhcc
Confidence 99986554 3444444444444322 3455789999999999999999953
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=1.2e-20 Score=167.45 Aligned_cols=190 Identities=16% Similarity=0.121 Sum_probs=133.3
Q ss_pred EEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCch------hHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP------QLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 10 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~------~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
-+...|++|+||+||++.. .+.+|+.+.+....... .+.+|+++|+.|.+..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~-------------------- 62 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLP-------------------- 62 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCC--------------------
Confidence 4577899999999998865 67778877665543322 3678999999997654
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC-CCCcEE
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDI-KPDNFL 161 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDL-kp~Nil 161 (449)
++|.+..+ +..+++|||+ |.+|...... ....++.|++.+|+++|++||+|||| ||+|||
T Consensus 63 ------~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NIL 124 (218)
T PRK12274 63 ------RTPRLLHW----DGRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWL 124 (218)
T ss_pred ------CCCEEEEE----cCEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEE
Confidence 56666544 3469999998 7777543211 12357789999999999999999999 799999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCcc-cccc-----CCCCCCCCccccccccccCC-CCC-ccchHHHHHHHHHHHH
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNRH-IPYR-----ENKNLTGTARYASCNTHLGI-EQS-RRDDLESLGYVLLYFL 233 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~~-~~~~-----~~~~~~gt~~y~aPE~~~~~-~~s-~~~DvwSlG~il~el~ 233 (449)
++ .++.++|+|||+|........... ..++ ..-....++.|++|+...-. ..+ .+.++++-|+.+|.++
T Consensus 125 v~---~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~ 201 (218)
T PRK12274 125 VQ---EDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFV 201 (218)
T ss_pred Ec---CCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHH
Confidence 94 678899999999985443221000 0000 00011246777888754432 223 5679999999999999
Q ss_pred hCCCCCCCC
Q 013125 234 RGSLPWQGL 242 (449)
Q Consensus 234 ~G~~pf~~~ 242 (449)
|+..++.+.
T Consensus 202 ~~~~~~~~~ 210 (218)
T PRK12274 202 TRRVLHWED 210 (218)
T ss_pred hccCCcccc
Confidence 999887653
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=3.3e-20 Score=173.76 Aligned_cols=188 Identities=18% Similarity=0.269 Sum_probs=138.8
Q ss_pred CCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCC-CCeEEEEeecce
Q 013125 101 GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK-ANQVYIIDFGLA 179 (449)
Q Consensus 101 ~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~-~~~vkL~DfGla 179 (449)
....|+||..+..+|..++. .+..+......++.|+++|+.|||.+||.|||||.+|||+.++++ ...+.|+|||++
T Consensus 315 ~~tlylvMkrY~~tLr~yl~--~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc 392 (598)
T KOG4158|consen 315 PKTLYLVMKRYRQTLREYLW--TRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC 392 (598)
T ss_pred CceEEEehhcchhhHHHHHh--cCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence 45679999999999999885 566788888999999999999999999999999999999987543 457889999998
Q ss_pred eeecCCCCCccccccCCC-CCCCCccccccccccCCC------CCccchHHHHHHHHHHHHhCCCCCCCChhhcH-HHHH
Q 013125 180 KKYRDPTTNRHIPYRENK-NLTGTARYASCNTHLGIE------QSRRDDLESLGYVLLYFLRGSLPWQGLKAATK-KQKY 251 (449)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~------~s~~~DvwSlG~il~el~~G~~pf~~~~~~~~-~~~~ 251 (449)
--... .+...||.... ..-|....||||+....+ --.++|.|+.|.+.||++....||.+-..... ...+
T Consensus 393 LAd~~--hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y 470 (598)
T KOG4158|consen 393 LADDN--HGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY 470 (598)
T ss_pred eeccc--cccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh
Confidence 53322 22334443322 455788899999876432 13489999999999999999999987322111 1111
Q ss_pred HHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 252 DKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 252 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
+... .+.+...+|+.+++++...++.||.+|++..-....+
T Consensus 471 ----qe~q---LPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 471 ----QESQ---LPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred ----hhhh---CCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 1111 2223345589999999999999999999876333333
No 421
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=8.4e-21 Score=196.93 Aligned_cols=248 Identities=18% Similarity=0.135 Sum_probs=167.6
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc------hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH------PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~------~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
+|...+.||++.|=.|.+|++. +|. |+|||+.+.... .+.+.|++ ...+++++
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn------------------ 82 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPN------------------ 82 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCc------------------
Confidence 7889999999999999999984 344 899998765421 22333444 33344444
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
+..+...-...+..|||.+|...+|.|-+.. +.-+..-+.+.|+.||+.||..+|..||.|||||.+|||
T Consensus 83 ---------~lPfqk~~~t~kAAylvRqyvkhnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENIL 152 (1431)
T KOG1240|consen 83 ---------CLPFQKVLVTDKAAYLVRQYVKHNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENIL 152 (1431)
T ss_pred ---------ccchHHHHHhhHHHHHHHHHHhhhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEE
Confidence 2222222345677899999999999887752 222567788899999999999999999999999999999
Q ss_pred eecCCCCCeEEEEeecceeeecCCCCCc-cccccCCCCCCCCccccccccccCC----------C-CCccchHHHHHHHH
Q 013125 162 MGLGRKANQVYIIDFGLAKKYRDPTTNR-HIPYRENKNLTGTARYASCNTHLGI----------E-QSRRDDLESLGYVL 229 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~s~~~DvwSlG~il 229 (449)
|+ .=+-+.|+||..-+..--+..+. ..-|.-. +-..-.+|.|||-+... . .+++-||+|+||++
T Consensus 153 iT---SWNW~~LtDFAsFKPtYLPeDNPadf~fFFD-TSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCVi 228 (1431)
T KOG1240|consen 153 IT---SWNWLYLTDFASFKPTYLPEDNPADFTFFFD-TSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVI 228 (1431)
T ss_pred Ee---eechhhhhcccccCCccCCCCCcccceEEEe-cCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHH
Confidence 96 77899999997654322221111 0111111 11223479999976541 1 57788999999999
Q ss_pred HHHHh-CCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccC-hHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 013125 230 LYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSH-PAEFASYFHYCQSLTFDQRPDYGFLKRL 298 (449)
Q Consensus 230 ~el~~-G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~p~~Rp~~~~l~~~ 298 (449)
+||++ |++||.-. .+.+-.... ....+...+.+ ...++.++..|++.||++|.++++..+.
T Consensus 229 aELf~Eg~PlF~LS-------QL~aYr~~~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 229 AELFLEGRPLFTLS-------QLLAYRSGN-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHhcCCCcccHH-------HHHhHhccC-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 99998 89998521 111100110 12222222221 3468999999999999999999887664
No 422
>smart00090 RIO RIO-like kinase.
Probab=99.81 E-value=2e-19 Score=166.26 Aligned_cols=141 Identities=21% Similarity=0.256 Sum_probs=106.3
Q ss_pred ceEEeeeecccCceeEEEEE-EcCCCceEEEEEecCCCCc--------------------------hhHHHHHHHHHHHc
Q 013125 8 KYKLGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTKH--------------------------PQLLYEAKVYKILQ 60 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~-~~~~~~~vAvKv~~~~~~~--------------------------~~~~~E~~~l~~l~ 60 (449)
-|.+.+.||+|+||.||+|. +..+++.||||++...... ..+.+|+++++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999 6678999999988753210 12457888888886
Q ss_pred CCCcceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHH
Q 013125 61 GGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP-SLEDLFVYCRRKFSLKTVLMLADQMI 139 (449)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~-sL~~~~~~~~~~~~~~~~~~i~~qil 139 (449)
+..+ .+|.+..+ ...++|||++++ +|...... ...+....+..++.||+
T Consensus 109 ~~~i-------------------------~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~-~~~~~~~~~~~i~~qi~ 158 (237)
T smart00090 109 EAGV-------------------------PVPKPIAW----RRNVLVMEFIGGDGLPAPRLK-DVEPEEEEEFELYDDIL 158 (237)
T ss_pred hcCC-------------------------CCCeeeEe----cCceEEEEEecCCcccccccc-cCCcchHHHHHHHHHHH
Confidence 5311 23333322 234899999944 55544322 33466667889999999
Q ss_pred HHHHHHHhCC-ccccCCCCCcEEeecCCCCCeEEEEeecceeee
Q 013125 140 ARIEYVHSRG-FLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 182 (449)
Q Consensus 140 ~~L~~LH~~g-iiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~ 182 (449)
.+|.+||++| |+||||||+||++. .+.++|+|||+|...
T Consensus 159 ~~l~~LH~~g~iiH~Dikp~NIli~----~~~i~LiDFg~a~~~ 198 (237)
T smart00090 159 EEMRKLYKEGELVHGDLSEYNILVH----DGKVVIIDVSQSVEL 198 (237)
T ss_pred HHHHHHHhcCCEEeCCCChhhEEEE----CCCEEEEEChhhhcc
Confidence 9999999999 99999999999993 678999999998643
No 423
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=6.6e-20 Score=163.75 Aligned_cols=242 Identities=12% Similarity=0.125 Sum_probs=174.0
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc----hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
..++-+|.+...|+.|+|++..+ .++.|+++-..-. ..|..|.-.++++.|+|+...++
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrifshpnilpvlg--------------- 254 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLG--------------- 254 (448)
T ss_pred hhhhhhhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhh---------------
Confidence 34667888999999999999544 4567877654322 23566777777778777554433
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCcE
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRR-KFSLKTVLMLADQMIARIEYVHSRG--FLHRDIKPDNF 160 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~-~~~~~~~~~i~~qil~~L~~LH~~g--iiHrDLkp~Ni 160 (449)
.+....+..++..|+ .++|..++..... -.+..++.+++..|+.|+.|||+.. |.--.|....+
T Consensus 255 ------------acnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hv 322 (448)
T KOG0195|consen 255 ------------ACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHV 322 (448)
T ss_pred ------------hccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceE
Confidence 334556778899999 8999998875322 2577889999999999999999964 44557888999
Q ss_pred EeecCCCCCeEE--EEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCC---CccchHHHHHHHHHHHHhC
Q 013125 161 LMGLGRKANQVY--IIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ---SRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 161 ll~~~~~~~~vk--L~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---s~~~DvwSlG~il~el~~G 235 (449)
++ |++.+.+ .+|--++.. ..+..-.+.||+||.+...+- -+++|+|||++++||+.|.
T Consensus 323 mi---dedltarismad~kfsfq--------------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~tr 385 (448)
T KOG0195|consen 323 MI---DEDLTARISMADTKFSFQ--------------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTR 385 (448)
T ss_pred Ee---cchhhhheecccceeeee--------------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcc
Confidence 99 4555544 455444321 123344789999999987653 3479999999999999999
Q ss_pred CCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013125 236 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 302 (449)
Q Consensus 236 ~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~ 302 (449)
..||....+.+-. .+|.-..+ ...+..+....+..||.-|...||.+||.|+.|.-.|++.
T Consensus 386 evpfadlspmecg---mkialegl---rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 386 EVPFADLSPMECG---MKIALEGL---RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred ccccccCCchhhh---hhhhhccc---cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 9999987765322 22221121 2223356678899999999999999999999998888754
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.77 E-value=6e-18 Score=152.77 Aligned_cols=139 Identities=16% Similarity=0.184 Sum_probs=98.2
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCC--CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSG--TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
.+.||+|+||.||. +..+... +||++... .....+.+|+++++.+.|... .++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~----------------------~h~ 61 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLI----------------------DWS 61 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCC----------------------CCc
Confidence 56899999999995 6666666 68987653 234468999999999954210 011
Q ss_pred CcCeeEEecccC---Ce-eEEEEecCC---CCHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHhCCccccCCCCCcEE
Q 013125 90 GIPNIKWYGVDG---ED-NVLVLDLLG---PSLEDLFVYCRRKFSLKTVLMLADQMIARI-EYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 90 ~i~~~~~~~~~~---~~-~~lv~e~~g---~sL~~~~~~~~~~~~~~~~~~i~~qil~~L-~~LH~~giiHrDLkp~Nil 161 (449)
+|+.++.+.... .. +.+|+||.| ++|.++++. ..++.. ..++.|++.++ +|||+++|+||||||+|||
T Consensus 62 nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~--~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NIL 137 (210)
T PRK10345 62 GIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ--CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNIL 137 (210)
T ss_pred ccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc--ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEE
Confidence 344443333332 23 337899964 899999964 346655 35678888888 9999999999999999999
Q ss_pred eecCC-CCCeEEEEeecce
Q 013125 162 MGLGR-KANQVYIIDFGLA 179 (449)
Q Consensus 162 l~~~~-~~~~vkL~DfGla 179 (449)
++..+ ....++|+||+.+
T Consensus 138 l~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 138 CQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EeccCCCCCcEEEEECCCC
Confidence 96432 3458999995444
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=8.1e-18 Score=153.43 Aligned_cols=132 Identities=26% Similarity=0.433 Sum_probs=102.2
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCCCC-c---------hhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-H---------PQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~-~---------~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
++.||+|++|.||+|.+ .+..|++|+...... . ..+.+|++++..+.+.++.
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~---------------- 62 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVN---------------- 62 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCC----------------
Confidence 36799999999999987 677899998654321 1 2356788888888765421
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
+|.+ +.......++||||+ |++|.+++.... . ....++.+++.+|.+||+.|++|||++|+||
T Consensus 63 ---------~p~~--~~~~~~~~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Ni 126 (211)
T PRK14879 63 ---------VPAV--YFVDPENFIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNM 126 (211)
T ss_pred ---------CCeE--EEEeCCCCEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccE
Confidence 2222 223445678999999 889998876422 2 7889999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeecceee
Q 013125 161 LMGLGRKANQVYIIDFGLAKK 181 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~~ 181 (449)
|+. .+.++|+|||++..
T Consensus 127 l~~----~~~~~liDf~~a~~ 143 (211)
T PRK14879 127 ILS----GGKIYLIDFGLAEF 143 (211)
T ss_pred EEE----CCCEEEEECCcccC
Confidence 993 67899999998864
No 426
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.75 E-value=1.5e-17 Score=150.32 Aligned_cols=127 Identities=22% Similarity=0.398 Sum_probs=97.2
Q ss_pred eecccCceeEEEEEEcCCCceEEEEEecCCCC----------chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----------HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 14 ~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~----------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.||+|+||.||+|.+ ++..|++|+...... ..++.+|+++++.+.+.++
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i------------------- 59 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGV------------------- 59 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCC-------------------
Confidence 389999999999985 567899998543211 1235678999988876531
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
.+|.+ +....+..++|||++ |++|.+++..... .++.|++.+|.+||+.|++|||++|+||++
T Consensus 60 ------~~p~~--~~~~~~~~~lv~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~ 123 (199)
T TIGR03724 60 ------NTPVV--YDVDPDNKTIVMEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKAGIVHGDLTTSNIIV 123 (199)
T ss_pred ------CCCEE--EEEECCCCEEEEEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHCCeecCCCCcceEEE
Confidence 12222 233455678999999 8888887653110 789999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceee
Q 013125 163 GLGRKANQVYIIDFGLAKK 181 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~ 181 (449)
. .+.++++|||++..
T Consensus 124 ~----~~~~~liDfg~a~~ 138 (199)
T TIGR03724 124 R----DDKLYLIDFGLGKY 138 (199)
T ss_pred E----CCcEEEEECCCCcC
Confidence 3 68899999999864
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=1.6e-17 Score=150.06 Aligned_cols=136 Identities=23% Similarity=0.310 Sum_probs=100.3
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCc------------------------hhHHHHHHHHHHHcCCCc
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH------------------------PQLLYEAKVYKILQGGSK 64 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~------------------------~~~~~E~~~l~~l~~~~~ 64 (449)
|.+.+.||+|+||.||+|... +++.||||++...... .....|..++..+.+.++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 889999999999999999874 7999999986643210 013456666666654421
Q ss_pred ceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 013125 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIE 143 (449)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~ 143 (449)
.++.... ....++|||++ |++|..+.. ......++.+++.++.
T Consensus 96 -------------------------~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~ 139 (198)
T cd05144 96 -------------------------PVPKPID----WNRHAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIV 139 (198)
T ss_pred -------------------------CCCceee----cCCceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHH
Confidence 1222222 13458999999 667765432 1345678899999999
Q ss_pred HHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecC
Q 013125 144 YVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184 (449)
Q Consensus 144 ~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~ 184 (449)
++|..||+||||||+||++. +++.++|+|||++.....
T Consensus 140 ~lh~~gi~H~Dl~p~Nill~---~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 140 KAYKHGIIHGDLSEFNILVD---DDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred HHHHCCCCcCCCCcccEEEc---CCCcEEEEECCccccCCC
Confidence 99999999999999999994 688999999999965543
No 428
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.72 E-value=5.4e-17 Score=168.27 Aligned_cols=133 Identities=22% Similarity=0.352 Sum_probs=100.7
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC-CC---------chhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-TK---------HPQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~-~~---------~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
..|...++||+|+||+||+|.+... .+++|+.... .. ...+.+|+++++.+++.++.
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~----------- 399 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVP----------- 399 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCC-----------
Confidence 4456789999999999999987443 3444432211 11 13467899999999876532
Q ss_pred hhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDI 155 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDL 155 (449)
....+.......++||||+ |++|.+++. ....++.|++.+|.+||+.|++||||
T Consensus 400 ----------------~p~~~~~~~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDl 454 (535)
T PRK09605 400 ----------------TPVIYDVDPEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDL 454 (535)
T ss_pred ----------------eeEEEEEeCCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 2233334455678999999 889988765 34678999999999999999999999
Q ss_pred CCCcEEeecCCCCCeEEEEeecceee
Q 013125 156 KPDNFLMGLGRKANQVYIIDFGLAKK 181 (449)
Q Consensus 156 kp~Nill~~~~~~~~vkL~DfGla~~ 181 (449)
||+|||+ +++.++|+|||+++.
T Consensus 455 kp~NILl----~~~~~~liDFGla~~ 476 (535)
T PRK09605 455 TTSNFIV----RDDRLYLIDFGLGKY 476 (535)
T ss_pred ChHHEEE----ECCcEEEEeCccccc
Confidence 9999999 467899999999864
No 429
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=3.7e-18 Score=166.25 Aligned_cols=174 Identities=25% Similarity=0.330 Sum_probs=130.1
Q ss_pred CeeEEEEecC-CCCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecc
Q 013125 102 EDNVLVLDLL-GPSLEDLFVY--CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178 (449)
Q Consensus 102 ~~~~lv~e~~-g~sL~~~~~~--~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGl 178 (449)
.+.||.|++| ..+|.+++.. ....-++...+.+..|++.|++| +|.+|||+||.||++. .+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhhhhhhh
Confidence 4678999999 8899999963 23457888899999999999999 9999999999999995 667899999999
Q ss_pred eeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHh-CCCCCCCChhhcHHHHHHHHHHh
Q 013125 179 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEK 257 (449)
Q Consensus 179 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~-G~~pf~~~~~~~~~~~~~~i~~~ 257 (449)
........+. ..++.....-+||.+||+||.+.+..|+.++||||||++|+|+++ =...|... ..+..+...
T Consensus 403 ~ts~~~~~~~-~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~------~t~~d~r~g 475 (516)
T KOG1033|consen 403 VTSQDKDETV-APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI------ATLTDIRDG 475 (516)
T ss_pred eeecccCCcc-cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH------HhhhhhhcC
Confidence 9876655411 111223346689999999999999999999999999999999997 22333221 111112111
Q ss_pred hcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 258 KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
.+| +..+...| +-..|+..++...|.+||++
T Consensus 476 --~ip-~~~~~d~p-~e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 476 --IIP-PEFLQDYP-EEYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred --CCC-hHHhhcCc-HHHHHHHHhcCCCcccCchH
Confidence 222 22333333 45689999999999999943
No 430
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.71 E-value=4.3e-17 Score=161.67 Aligned_cols=211 Identities=14% Similarity=0.196 Sum_probs=156.2
Q ss_pred CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccCCCCCcEEeecC
Q 013125 88 LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF-LHRDIKPDNFLMGLG 165 (449)
Q Consensus 88 ~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~gi-iHrDLkp~Nill~~~ 165 (449)
|.++..+.+.+.++...++|.+|| .|+|.|.+......++..-...+.+.|+.||+|||+--| .|+.|+..|+++
T Consensus 6 h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv--- 82 (484)
T KOG1023|consen 6 HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV--- 82 (484)
T ss_pred hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee---
Confidence 345566666667778899999999 899999998766678888888999999999999998644 999999999999
Q ss_pred CCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCC-------CCccchHHHHHHHHHHHHhCCCC
Q 013125 166 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-------QSRRDDLESLGYVLLYFLRGSLP 238 (449)
Q Consensus 166 ~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~s~~~DvwSlG~il~el~~G~~p 238 (449)
+..-.+||+|||+........... ......-..-|.|||.+.+.. .+.+.||||||++++|+++.+.|
T Consensus 83 d~~w~lklt~~Gl~~~~~~~~~~~-----~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 83 DSRWVLKLTDFGLNSLLEETAEPE-----AHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred eeeEEEEechhhhccccccccccc-----ccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 588899999999987654311000 011112345689999998742 36679999999999999999999
Q ss_pred CCCChhhc-HHHHHHHHHHhhcCCCHHHhh--ccChHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhc
Q 013125 239 WQGLKAAT-KKQKYDKICEKKVSTPIEVLC--KSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 306 (449)
Q Consensus 239 f~~~~~~~-~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 306 (449)
|....... ..+.+..+.........+.+. ...++++..++..||..+|..||+++.+...++.+....
T Consensus 158 ~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred cccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 97633222 233333333312222222222 145668999999999999999999999999888877654
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=2.9e-16 Score=140.28 Aligned_cols=158 Identities=22% Similarity=0.238 Sum_probs=93.4
Q ss_pred EeeeecccCceeEEEEEEcCCCceEEEEEecCCCCch-hHHHHH--HHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP-QLLYEA--KVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~-~~~~E~--~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
+.+.||+|+||.||+|.+. +++.||||++....... .....+ +.+....+.+......... ...+..+....
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~e~~~l~~l~ 75 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWA----EKEFRNLKRLY 75 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHH----HHHHHHHHHHH
Confidence 3578999999999999986 78999999977542211 111111 1121112111111100000 00001111111
Q ss_pred CC--CcCeeEEecccCCeeEEEEecCCC-CHH-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCcEEe
Q 013125 88 LG--GIPNIKWYGVDGEDNVLVLDLLGP-SLE-DLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLM 162 (449)
Q Consensus 88 ~~--~i~~~~~~~~~~~~~~lv~e~~g~-sL~-~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~Nill 162 (449)
.. .++....+ ...++||||+.+ ++. ..+..... ...+..++.|++.++.++|. +||+||||||+||++
T Consensus 76 ~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~---~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili 148 (187)
T cd05119 76 EAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRL---LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILV 148 (187)
T ss_pred HcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhhh---cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE
Confidence 11 13333322 235899999943 221 11111111 16678899999999999999 999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRD 184 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~ 184 (449)
+ ++.++|+|||.+.....
T Consensus 149 ~----~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 149 D----DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred E----CCcEEEEECcccccccC
Confidence 3 78899999999975544
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=4.4e-15 Score=127.06 Aligned_cols=132 Identities=21% Similarity=0.296 Sum_probs=104.8
Q ss_pred EeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCC
Q 013125 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGG 90 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (449)
+++.||.|.++.||++.+.. ..+++|+.........+..|+.+++.+++.. ..
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~-------------------------~~ 54 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREKGADREREVAILQLLARKG-------------------------LP 54 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCchhHHHHHHHHHHHHHHcC-------------------------CC
Confidence 46889999999999999843 6799998765443456889999999997651 04
Q ss_pred cCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCCCcEEeecCC
Q 013125 91 IPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR---GFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 91 i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~---giiHrDLkp~Nill~~~~ 166 (449)
++.+..+....+..+++||++ |..+..+ +......++.+++.+|++||.. +++|+||+|+||++.
T Consensus 55 ~p~~~~~~~~~~~~~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~--- 123 (155)
T cd05120 55 VPKVLASGESDGWSYLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD--- 123 (155)
T ss_pred CCeEEEEcCCCCccEEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE---
Confidence 556666666667899999999 4444432 5566778899999999999984 799999999999995
Q ss_pred CCCeEEEEeeccee
Q 013125 167 KANQVYIIDFGLAK 180 (449)
Q Consensus 167 ~~~~vkL~DfGla~ 180 (449)
+.+.++++|||.+.
T Consensus 124 ~~~~~~l~Df~~~~ 137 (155)
T cd05120 124 DGKILGIIDWEYAG 137 (155)
T ss_pred CCcEEEEEeccccc
Confidence 56899999999875
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.62 E-value=8.5e-15 Score=135.69 Aligned_cols=133 Identities=17% Similarity=0.233 Sum_probs=94.8
Q ss_pred eeec-ccCceeEEEEEEcCCCceEEEEEecCC---------------CCchhHHHHHHHHHHHcCCCcceeeEeecchhh
Q 013125 13 RKIG-SGSFGEIFLASHVDTNEIVAVKIENSG---------------TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVI 76 (449)
Q Consensus 13 ~~LG-~G~fg~Vy~a~~~~~~~~vAvKv~~~~---------------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 76 (449)
..|| .||.|+||.++. .+..++||..... .....+.+|++++..|++.++.
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~----------- 103 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLP----------- 103 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCC-----------
Confidence 4577 889999999877 4678899876421 1123467899999999876531
Q ss_pred hhhhhhhhcccCCCcCeeEEeccc-C---CeeEEEEecC-C-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 013125 77 IHALTIIFSSTLGGIPNIKWYGVD-G---EDNVLVLDLL-G-PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF 150 (449)
Q Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~-~---~~~~lv~e~~-g-~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~gi 150 (449)
+|....+... . ...++|||++ | .+|.+++.. ..++... +.||+.+|.+||++||
T Consensus 104 --------------vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~~----~~~i~~~l~~lH~~GI 163 (239)
T PRK01723 104 --------------VPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE--APLSEEQ----WQAIGQLIARFHDAGV 163 (239)
T ss_pred --------------CceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc--CCCCHHH----HHHHHHHHHHHHHCCC
Confidence 1222211111 1 1236999999 4 588887753 3455443 5789999999999999
Q ss_pred cccCCCCCcEEeecCCCCCeEEEEeecceee
Q 013125 151 LHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181 (449)
Q Consensus 151 iHrDLkp~Nill~~~~~~~~vkL~DfGla~~ 181 (449)
+||||||+|||++ .++.++|+|||.+..
T Consensus 164 ~HrDlkp~NILv~---~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 164 YHADLNAHNILLD---PDGKFWLIDFDRGEL 191 (239)
T ss_pred CCCCCCchhEEEc---CCCCEEEEECCCccc
Confidence 9999999999994 566899999998854
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=4.2e-16 Score=161.51 Aligned_cols=252 Identities=26% Similarity=0.312 Sum_probs=178.7
Q ss_pred CCceEEeeeecccCceeEEEEEEcC-CCceEEEEEecCCCC-ch---hHHHHHHHHHHHc-CCCcceeeEeecchhhhhh
Q 013125 6 GVKYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTK-HP---QLLYEAKVYKILQ-GGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 6 ~~~y~i~~~LG~G~fg~Vy~a~~~~-~~~~vAvKv~~~~~~-~~---~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~ 79 (449)
...|.+.+.||+|+|+.|-++.... +...+|+|.+..... .. ....|..+-+.+. |.+.+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~-------------- 84 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTV-------------- 84 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccccccccc--------------
Confidence 4578999999999999999998753 344577776554321 11 2233555555554 44332
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHH-HHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLF-VYCRRKFSLKTVLMLADQMIARIEYVH-SRGFLHRDIK 156 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~-~~~~~~~~~~~~~~i~~qil~~L~~LH-~~giiHrDLk 156 (449)
.+.....+....++++++. |+++.+.+ .......+...+..++.|+..++.|+| ..++.|||||
T Consensus 85 -------------~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ik 151 (601)
T KOG0590|consen 85 -------------HMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIK 151 (601)
T ss_pred -------------ccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCC
Confidence 2333345667788999998 88888777 332225677788899999999999999 9999999999
Q ss_pred CCcEEeecCCCCC-eEEEEeecceeeecC-CCCCccccccCCCCCCC-CccccccccccCCC-CCccchHHHHHHHHHHH
Q 013125 157 PDNFLMGLGRKAN-QVYIIDFGLAKKYRD-PTTNRHIPYRENKNLTG-TARYASCNTHLGIE-QSRRDDLESLGYVLLYF 232 (449)
Q Consensus 157 p~Nill~~~~~~~-~vkL~DfGla~~~~~-~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~~-~s~~~DvwSlG~il~el 232 (449)
|+|.++. ..+ .+++.|||+|..+.. ..... .....+| ++.|+|||.+.+.. .....|+||.|+++.-+
T Consensus 152 P~n~~l~---~s~~~l~~~df~~At~~~~~~g~~~-----~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~ 223 (601)
T KOG0590|consen 152 PSNSLLD---ESGSALKIADFGLATAYRNKNGAER-----SLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAM 223 (601)
T ss_pred Cccchhc---cCCCcccCCCchhhccccccCCcce-----eeecccCCCCCCCCcccccchhhcCCCccccccccccccc
Confidence 9999994 566 899999999998876 33221 2235567 99999999999854 57889999999999999
Q ss_pred HhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 233 LRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 233 ~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
++|..||........ .+....... .......+..+.....+++..++..+|..|.+.+++
T Consensus 224 ~~g~~p~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~ 283 (601)
T KOG0590|consen 224 LTGELPWDFPSRKDG--RYSSWKSNK-GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEEL 283 (601)
T ss_pred ccCCCCccccccccc--cceeecccc-cccccCccccCChhhhhcccccccCCchhccccccc
Confidence 999999986543321 111111111 111123345566778888888888888889887665
No 435
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.49 E-value=3.7e-13 Score=119.48 Aligned_cols=138 Identities=16% Similarity=0.194 Sum_probs=97.2
Q ss_pred eeeecccCceeEEEEEEcC------CCceEEEEEecCCC------------C------------chh----HHHHHHHHH
Q 013125 12 GRKIGSGSFGEIFLASHVD------TNEIVAVKIENSGT------------K------------HPQ----LLYEAKVYK 57 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~------~~~~vAvKv~~~~~------------~------------~~~----~~~E~~~l~ 57 (449)
...||.|--+.||.|.... .+..+|||+.+... + ... ..+|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998653 35789999854210 0 001 136777777
Q ss_pred HHcCCCcceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCC-HH-HHHHHhcCCCCHHHHHHHH
Q 013125 58 ILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPS-LE-DLFVYCRRKFSLKTVLMLA 135 (449)
Q Consensus 58 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~s-L~-~~~~~~~~~~~~~~~~~i~ 135 (449)
++..... .+|.+..+ ...+|||||++++ +. ..++ ...++.+....+.
T Consensus 82 rl~~~Gv-------------------------~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk--d~~~~~~~~~~i~ 130 (197)
T cd05146 82 RMQKAGI-------------------------PCPEVVVL----KKHVLVMSFIGDDQVPAPKLK--DAKLNDEEMKNAY 130 (197)
T ss_pred HHHHcCC-------------------------CCCeEEEe----cCCEEEEEEcCCCCccchhhh--ccccCHHHHHHHH
Confidence 7665431 35555543 5678999999654 21 1121 2235556777888
Q ss_pred HHHHHHHHHH-HhCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecC
Q 013125 136 DQMIARIEYV-HSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184 (449)
Q Consensus 136 ~qil~~L~~L-H~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~ 184 (449)
.|++.+|..| |..||+|+||++.|||+ .++.++|+|||.|.....
T Consensus 131 ~~i~~~l~~l~H~~glVHGDLs~~NIL~----~~~~v~iIDF~qav~~~h 176 (197)
T cd05146 131 YQVLSMMKQLYKECNLVHADLSEYNMLW----HDGKVWFIDVSQSVEPTH 176 (197)
T ss_pred HHHHHHHHHHHHhCCeecCCCCHHHEEE----ECCcEEEEECCCceeCCC
Confidence 9999999998 89999999999999999 357899999999876543
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.48 E-value=2.4e-13 Score=136.72 Aligned_cols=160 Identities=20% Similarity=0.311 Sum_probs=97.0
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcC----CC----------cceee--------Ee
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG----GS----------KIRLV--------VF 70 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~----~~----------~~~~~--------~~ 70 (449)
+.||+|++|.||+|+.. +|+.||||+.... ....+..++.+++.+.. .. ++..+ ..
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~-i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPG-IEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCC-cHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 57999999999999864 6899999998653 23345555555543310 00 00000 00
Q ss_pred ecchhhhhhhhhhhcccCCC--cCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHH-HHHHHH
Q 013125 71 HVDHVIIHALTIIFSSTLGG--IPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIA-RIEYVH 146 (449)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~-~L~~LH 146 (449)
..+..+...+...+. ..+. +|.++ .......+|||||+ |.+|.++.......+. ...++.+++. .+..+|
T Consensus 201 ~~Ea~n~~~~~~~~~-~~~~v~vP~v~--~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 201 RREAANASELGENFK-NDPGVYVPEVY--WDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHHHhcC-CCCCEEeCCEe--hhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHH
Confidence 000000000111110 1122 33333 33344579999999 8888877653222232 2345556655 478899
Q ss_pred hCCccccCCCCCcEEeecCCCCCeEEEEeecceeeec
Q 013125 147 SRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183 (449)
Q Consensus 147 ~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~ 183 (449)
..|++|+|+||.||++. +++.++|+|||++..+.
T Consensus 275 ~~g~~H~D~hPgNilv~---~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVL---KDGKIIALDFGIVGRLS 308 (437)
T ss_pred hCCceeCCCCcccEEEC---CCCcEEEEeCCCeeECC
Confidence 99999999999999994 67899999999987654
No 437
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.45 E-value=3.9e-12 Score=129.60 Aligned_cols=165 Identities=17% Similarity=0.315 Sum_probs=90.3
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHc-------CC-Ccce-------------
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ-------GG-SKIR------------- 66 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~-------~~-~~~~------------- 66 (449)
.|.. +.||+|++|.||+|+...+|+.||||++...- .+.+...+++++.+. .. ....
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i-~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDI-LPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcch-HHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 4665 78999999999999998889999999987531 112222222222210 00 0000
Q ss_pred -eeEeecchhhhhhhhhhhccc-CCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCC-----HHHHHHHHHHH
Q 013125 67 -LVVFHVDHVIIHALTIIFSST-LGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFS-----LKTVLMLADQM 138 (449)
Q Consensus 67 -~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~-----~~~~~~i~~qi 138 (449)
.+....+-.+...+...+... .=.+|.+++ ......+|||||+ |+.+.++-.-.....+ ...+..++
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~--d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~--- 273 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYW--DYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFF--- 273 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeec--ccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHH---
Confidence 000000000111111111100 013444443 3345679999999 8888764321122222 22233333
Q ss_pred HHHHHHHHhCCccccCCCCCcEEeecC-CCCCeEEEEeecceeeec
Q 013125 139 IARIEYVHSRGFLHRDIKPDNFLMGLG-RKANQVYIIDFGLAKKYR 183 (449)
Q Consensus 139 l~~L~~LH~~giiHrDLkp~Nill~~~-~~~~~vkL~DfGla~~~~ 183 (449)
..++..|++|+|+||.||++..+ ...+.++++|||++....
T Consensus 274 ----~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 274 ----TQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ----HHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 34456999999999999999521 112389999999987553
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.44 E-value=9.9e-13 Score=115.36 Aligned_cols=126 Identities=21% Similarity=0.301 Sum_probs=93.2
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCC
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGG 90 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (449)
++.|+.|.++.||+++. .++.|++|+..... ....+.+|+++++.+.+.. .
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~--------------------------~ 54 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAG--------------------------I 54 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhC--------------------------C
Confidence 56789999999999987 47789999876543 2334688999999887643 2
Q ss_pred cCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-----cccCCCCCcEEeec
Q 013125 91 IPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF-----LHRDIKPDNFLMGL 164 (449)
Q Consensus 91 i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~gi-----iHrDLkp~Nill~~ 164 (449)
+|.+..+.. ...++|||++ |.++... . .....++.+++.+|..||..++ +|+|++|.||++.
T Consensus 55 ~P~~~~~~~--~~~~lv~e~i~G~~l~~~------~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~- 122 (170)
T cd05151 55 GPKLYYFDP--ETGVLITEFIEGSELLTE------D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD- 122 (170)
T ss_pred CCceEEEeC--CCCeEEEEecCCCccccc------c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-
Confidence 344444432 3458999999 6555432 0 1123456889999999999885 9999999999993
Q ss_pred CCCCCeEEEEeeccee
Q 013125 165 GRKANQVYIIDFGLAK 180 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~ 180 (449)
++.++++|||.+.
T Consensus 123 ---~~~~~liDf~~a~ 135 (170)
T cd05151 123 ---DGRLWLIDWEYAG 135 (170)
T ss_pred ---CCeEEEEeccccc
Confidence 5679999998874
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=2e-13 Score=135.81 Aligned_cols=254 Identities=18% Similarity=0.152 Sum_probs=181.0
Q ss_pred cccCCceEEeeeecc--cCceeEEEEEE--cCCCceEEEEEecCCCC--c--hhHHHHHHHHHHHcCCCcceeeEeecch
Q 013125 3 RIIGVKYKLGRKIGS--GSFGEIFLASH--VDTNEIVAVKIENSGTK--H--PQLLYEAKVYKILQGGSKIRLVVFHVDH 74 (449)
Q Consensus 3 ~i~~~~y~i~~~LG~--G~fg~Vy~a~~--~~~~~~vAvKv~~~~~~--~--~~~~~E~~~l~~l~~~~~~~~~~~~~~~ 74 (449)
.++..+|.+.+.+|. |.+|.||.+.. ......+|+|.-+.... . ..-.+|+.-..++....
T Consensus 110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~----------- 178 (524)
T KOG0601|consen 110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHE----------- 178 (524)
T ss_pred chhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccc-----------
Confidence 355678889999999 99999999998 78888999997433211 1 12234443322222111
Q ss_pred hhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHH----HHHHHHhCCc
Q 013125 75 VIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIA----RIEYVHSRGF 150 (449)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~----~L~~LH~~gi 150 (449)
......-.....+..++-+|+|+.+|..+......-++...++.++.+... ||.++|+.++
T Consensus 179 ---------------~~v~~~~~~e~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~ 243 (524)
T KOG0601|consen 179 ---------------NPVRDSPAWEGSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNI 243 (524)
T ss_pred ---------------cccccCcccccCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcc
Confidence 111112223567888999999999888887655555888889999999999 9999999999
Q ss_pred cccCCCCCcEEeecCCCC-CeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHH
Q 013125 151 LHRDIKPDNFLMGLGRKA-NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVL 229 (449)
Q Consensus 151 iHrDLkp~Nill~~~~~~-~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il 229 (449)
+|-|+||+||++. ++ ..++++|||+...+........ +.......|...|++||+..+. ++...|++++|.++
T Consensus 244 ~~~~~kp~~i~~~---~~~~s~~~~df~~v~~i~~~~~~~~--~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~ 317 (524)
T KOG0601|consen 244 VHDDLKPANIFTT---SDWTSCKLTDFGLVSKISDGNFSSV--FKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVI 317 (524)
T ss_pred cccccchhheecc---cccceeecCCcceeEEccCCccccc--eeeeecCCCCceEeChhhhccc-cchHhhhcchhhhh
Confidence 9999999999995 55 8999999999988776653221 1112233577889999998874 67899999999999
Q ss_pred HHHHhCCCCCCCC--hhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 013125 230 LYFLRGSLPWQGL--KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 297 (449)
Q Consensus 230 ~el~~G~~pf~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~ 297 (449)
.+..+|..++..- ...... ... ....++|.+...++...+..+++.++-.|++...+..
T Consensus 318 l~~~l~~~~~~~g~~~~W~~~-------r~~--~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 318 LEAILGSHLPSVGKNSSWSQL-------RQG--YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred HhhHhhcccccCCCCCCcccc-------ccc--cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 9999987766543 111111 111 1335667777778888888999888888887765433
No 440
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=1.4e-11 Score=105.93 Aligned_cols=128 Identities=24% Similarity=0.412 Sum_probs=92.0
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEec-CCCCch---------hHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIEN-SGTKHP---------QLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~-~~~~~~---------~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
..|++|+-+.||.+.+ -+..+++|.-. +.-.++ +..+|++++..+...
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-------------------- 59 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-------------------- 59 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc--------------------
Confidence 4578999999999976 34457888532 222222 356788888877644
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEE
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 161 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nil 161 (449)
++|.-..+..+.+...|+|||. |..|.+.+... . ..++..+=.-+.-||..||+|+||.++||+
T Consensus 60 -------GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~----~----~~~~r~vG~~vg~lH~~givHGDLTtsNiI 124 (204)
T COG3642 60 -------GVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA----R----PDLLREVGRLVGKLHKAGIVHGDLTTSNII 124 (204)
T ss_pred -------CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc----c----hHHHHHHHHHHHHHHhcCeecCCCccceEE
Confidence 4444455556677788999999 66666677642 2 334455555667899999999999999999
Q ss_pred eecCCCCCeEEEEeecceee
Q 013125 162 MGLGRKANQVYIIDFGLAKK 181 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~ 181 (449)
+ .++.++++||||+..
T Consensus 125 l----~~~~i~~IDfGLg~~ 140 (204)
T COG3642 125 L----SGGRIYFIDFGLGEF 140 (204)
T ss_pred E----eCCcEEEEECCcccc
Confidence 9 455699999999863
No 441
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.29 E-value=3.8e-11 Score=102.68 Aligned_cols=143 Identities=17% Similarity=0.220 Sum_probs=103.4
Q ss_pred EeeeecccCceeEEEEEEcCCCceEEEEEec-CCCCch---------hHHHHHHHHHHHcCCCcceeeEeecchhhhhhh
Q 013125 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIEN-SGTKHP---------QLLYEAKVYKILQGGSKIRLVVFHVDHVIIHAL 80 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~-~~~~~~---------~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 80 (449)
.+..|-+|+-+.|+++.+ .|+.++||.-. +.-.++ +..+|++++.++....+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI---------------- 72 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGI---------------- 72 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC----------------
Confidence 677888999999999987 67888888522 222222 35778888888764421
Q ss_pred hhhhcccCCCcCeeEEecccCCeeEEEEecCCC--CHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 013125 81 TIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP--SLEDLFVYCRRK-FSLKTVLMLADQMIARIEYVHSRGFLHRDIKP 157 (449)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~--sL~~~~~~~~~~-~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp 157 (449)
..|.++ ..+....+|+|||+.| ++.+++...-.. ...+....++.+|=+.|.-||..+|||+||..
T Consensus 73 ---------~~P~l~--~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTT 141 (229)
T KOG3087|consen 73 ---------PAPRLI--FIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTT 141 (229)
T ss_pred ---------CCceEE--EEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccc
Confidence 233443 3455667899999955 788887754333 33333478888899999999999999999999
Q ss_pred CcEEeecCCCCCeEEEEeecceeee
Q 013125 158 DNFLMGLGRKANQVYIIDFGLAKKY 182 (449)
Q Consensus 158 ~Nill~~~~~~~~vkL~DfGla~~~ 182 (449)
+||++..++..-.+.|+|||++..-
T Consensus 142 SNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 142 SNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred cceEEecCCCcCceEEEeecchhcc
Confidence 9999964444455699999998643
No 442
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.19 E-value=8.7e-12 Score=130.60 Aligned_cols=279 Identities=19% Similarity=0.144 Sum_probs=184.6
Q ss_pred cCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
--+.+.+.+-+-+|+|+.++.+.-..++...++|+......... .++-......++.. .+.
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~----~~~~s~r~~s~~~i----~p~----------- 862 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRT----NDYESIRSKSNILI----TPR----------- 862 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhcc----ccccccCCccCccc----cCC-----------
Confidence 44667888899999999999998877787777776443211100 00000011111100 000
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEee
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~ 163 (449)
++.+.....-.......+||++|+ +++|...+...+ ..+.+-.+.+...+..++++||+..++|||++|.|+++.
T Consensus 863 ---~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~ 938 (1205)
T KOG0606|consen 863 ---SPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA 938 (1205)
T ss_pred ---CCceecccCCCCCCCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhcccccccchhhc
Confidence 001111111134567789999999 777777776533 456666777778889999999999999999999999994
Q ss_pred cCCCCCeEEEEeecceeee-cCCCC-------Cccc----------------cccCCCCCCCCccccccccccCCCCCcc
Q 013125 164 LGRKANQVYIIDFGLAKKY-RDPTT-------NRHI----------------PYRENKNLTGTARYASCNTHLGIEQSRR 219 (449)
Q Consensus 164 ~~~~~~~vkL~DfGla~~~-~~~~~-------~~~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~s~~ 219 (449)
..+..++.|||+.... .-+.. .... ..+......||+.|.+||...+..-...
T Consensus 939 ---~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ 1015 (1205)
T KOG0606|consen 939 ---YDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSA 1015 (1205)
T ss_pred ---ccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCc
Confidence 7899999999843321 11000 0000 1123446679999999999999999999
Q ss_pred chHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 013125 220 DDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 299 (449)
Q Consensus 220 ~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l~~~l 299 (449)
+|+|++|++++|.++|.+||....+. +.+..|.....+ .+......+.+.++++...+..++.+|..+.--
T Consensus 1016 ad~~~~g~~l~e~l~g~pp~na~tpq---~~f~ni~~~~~~--~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~---- 1086 (1205)
T KOG0606|consen 1016 ADWWSSGVCLFEVLTGIPPFNAETPQ---QIFENILNRDIP--WPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGA---- 1086 (1205)
T ss_pred chhhhhhhhhhhhhcCCCCCCCcchh---hhhhccccCCCC--CCCCccccChhhhhhhhhhhccCchhccCcccc----
Confidence 99999999999999999999876554 334444444333 333334457789999999999999999775411
Q ss_pred HHHHHhcCCCCCcccccccccc
Q 013125 300 HDLFSREGYDFDFVFDWTILKY 321 (449)
Q Consensus 300 ~~~~~~~~~~~~~~~dw~~l~~ 321 (449)
....+..+....||..+..
T Consensus 1087 ---~e~k~~~~~~~~~~~~l~~ 1105 (1205)
T KOG0606|consen 1087 ---AEVKGHPFFQDVDWENLAL 1105 (1205)
T ss_pred ---cccccCCccCCCCcccccc
Confidence 1234566777788876643
No 443
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=9.8e-10 Score=100.58 Aligned_cols=139 Identities=20% Similarity=0.313 Sum_probs=94.8
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
+.|+.|.++.||++...+ ++.+++|+..... ....+.+|+++++.+.+..+
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~------------------------- 57 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGV------------------------- 57 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCC-------------------------
Confidence 678999999999998743 5789999876543 24568899999999876421
Q ss_pred CcCeeEEecccC---CeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh------------------
Q 013125 90 GIPNIKWYGVDG---EDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS------------------ 147 (449)
Q Consensus 90 ~i~~~~~~~~~~---~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~------------------ 147 (449)
.+|.+..+.... +..++|||++ |.++.+.+.. ..++......++.+++..|..||+
T Consensus 58 ~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~ 135 (223)
T cd05154 58 PVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYL 135 (223)
T ss_pred CCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchH
Confidence 245554444443 2568999999 6555543210 234555555666666666666663
Q ss_pred --------------------------------------CCccccCCCCCcEEeecCCCCCeEEEEeeccee
Q 013125 148 --------------------------------------RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180 (449)
Q Consensus 148 --------------------------------------~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~ 180 (449)
..++|+|+++.|||++.+ ..+.+.|+||+.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~ 205 (223)
T cd05154 136 ERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEeccccc
Confidence 246899999999999511 14668999998764
No 444
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.10 E-value=3.9e-09 Score=99.04 Aligned_cols=132 Identities=17% Similarity=0.143 Sum_probs=92.9
Q ss_pred eEEEEEEcCCCceEEEEEecCCC-------------CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccC
Q 013125 22 EIFLASHVDTNEIVAVKIENSGT-------------KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTL 88 (449)
Q Consensus 22 ~Vy~a~~~~~~~~vAvKv~~~~~-------------~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (449)
.|+.+.. .|+.|.||...... ......+|...+..|....+
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GI------------------------ 90 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGV------------------------ 90 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCC------------------------
Confidence 3556544 56788899653322 01136788888888865432
Q ss_pred CCcCeeEEeccc-----CCeeEEEEecCCC--CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 89 GGIPNIKWYGVD-----GEDNVLVLDLLGP--SLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 89 ~~i~~~~~~~~~-----~~~~~lv~e~~g~--sL~~~~~~~-~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.+|....++.. ....+||+|++++ +|.+++... ....+......++.+++..+.-||..||+|+||++.||
T Consensus 91 -ptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~Ni 169 (268)
T PRK15123 91 -DTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHF 169 (268)
T ss_pred -CCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhE
Confidence 23333444432 2357899999954 688887643 34456677889999999999999999999999999999
Q ss_pred Eeec----CCCCCeEEEEeeccee
Q 013125 161 LMGL----GRKANQVYIIDFGLAK 180 (449)
Q Consensus 161 ll~~----~~~~~~vkL~DfGla~ 180 (449)
|+.. .++...++|+||+.+.
T Consensus 170 Ll~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 170 LLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred EEeccccCCCCCceEEEEECCccc
Confidence 9953 1235789999999874
No 445
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.09 E-value=4.9e-09 Score=105.93 Aligned_cols=181 Identities=15% Similarity=0.143 Sum_probs=125.5
Q ss_pred eEEeeeecccCceeEE-EEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhc
Q 013125 9 YKLGRKIGSGSFGEIF-LASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFS 85 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy-~a~~~~~~~~vAvKv~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (449)
|.| +..+-++.+ || -|..+.++.+|.|.+.+.... .....+-++-++.|+|++++.++.
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~---------------- 76 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLD---------------- 76 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhh----------------
Confidence 444 333333333 44 355567788899998876655 334677788899999998665432
Q ss_pred ccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCCCcEEeec
Q 013125 86 STLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVH-SRGFLHRDIKPDNFLMGL 164 (449)
Q Consensus 86 ~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH-~~giiHrDLkp~Nill~~ 164 (449)
........|||+|.+.. |...++. +....+..-+.||+.||.||| +++++|++|.-+.|+|
T Consensus 77 -----------t~e~~~~~ylvTErV~P-l~~~lk~----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV-- 138 (690)
T KOG1243|consen 77 -----------TTEEEGTLYLVTERVRP-LETVLKE----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV-- 138 (690)
T ss_pred -----------hhcccCceEEEeecccc-HHHHHHH----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE--
Confidence 23456688999999843 3333433 235677788999999999998 5799999999999999
Q ss_pred CCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhC
Q 013125 165 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRG 235 (449)
Q Consensus 165 ~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G 235 (449)
+..|..||++|-++......... .....--..|..|+.+-... -..|.|-|||+++|++.|
T Consensus 139 -n~~GeWkLggle~v~~~~~~~~~-------~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 139 -NESGEWKLGGLELVSKASGFNAP-------AKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred -cCCCcEEEeeeEEEeccccCCcc-------cccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 48999999999887654432211 11222233466666555443 257999999999999998
No 446
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.09 E-value=7.9e-11 Score=117.48 Aligned_cols=241 Identities=18% Similarity=0.114 Sum_probs=156.1
Q ss_pred cCCceEEeeeecccCceeEEEEEEc-CCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCcceeeEeecchhhhhh
Q 013125 5 IGVKYKLGRKIGSGSFGEIFLASHV-DTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHA 79 (449)
Q Consensus 5 ~~~~y~i~~~LG~G~fg~Vy~a~~~-~~~~~vAvKv~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (449)
...+|.++.+||.|.|+.|+.+... .++..+++|...+... +..-+.|+.+...+.-..
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~---------------- 326 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHL---------------- 326 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhccc----------------
Confidence 3467899999999999999998765 6788899996554311 111234444444432111
Q ss_pred hhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 80 LTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
+.+............|+-.||| ++++.... .....++....+.+..|++.++.++|++.++|+|+||+
T Consensus 327 ----------~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~ps 395 (524)
T KOG0601|consen 327 ----------PSVGKNSSWSQLRQGYIPLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPS 395 (524)
T ss_pred ----------ccCCCCCCccccccccCchhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchhhhccccccc
Confidence 1111111112334556888999 55554433 44566888889999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccc--ccccccCCCCCccchHHHHHHHHHHHHhCC
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYA--SCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
||++.. +++..++.|||++..+.... .......+++ ++.......+..+.|++|||..+.|.++|.
T Consensus 396 ni~i~~--~~~~~~~~~~~~~t~~~~~~----------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~ 463 (524)
T KOG0601|consen 396 NILISN--DGFFSKLGDFGCWTRLAFSS----------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGS 463 (524)
T ss_pred ceeecc--chhhhhccccccccccceec----------ccccccccccccchhhccccccccccccccccccccccccCc
Confidence 999952 23888999999986432211 1223344555 455556667899999999999999999985
Q ss_pred CCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 237 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 237 ~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
..-.... ....|......-. .+...++..+.......++..||.+.++
T Consensus 464 ~ls~~~~------~~~~i~~~~~p~~-----~~~~~~~q~~~kv~~~~~~~~~~l~~~l 511 (524)
T KOG0601|consen 464 PLSESGV------QSLTIRSGDTPNL-----PGLKLQLQVLLKVMINPDRKRRPSAVEL 511 (524)
T ss_pred ccCcccc------cceeeecccccCC-----CchHHhhhhhhhhhcCCccccchhhhhh
Confidence 4322111 1111222222211 1223567777777888888888877654
No 447
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.00 E-value=2.4e-09 Score=94.78 Aligned_cols=126 Identities=27% Similarity=0.349 Sum_probs=76.9
Q ss_pred eEEEEEEcCCCceEEEEEecCCC-----------------------Cc-----hhHHHHHHHHHHHcCCCcceeeEeecc
Q 013125 22 EIFLASHVDTNEIVAVKIENSGT-----------------------KH-----PQLLYEAKVYKILQGGSKIRLVVFHVD 73 (449)
Q Consensus 22 ~Vy~a~~~~~~~~vAvKv~~~~~-----------------------~~-----~~~~~E~~~l~~l~~~~~~~~~~~~~~ 73 (449)
.||.|... .+..||||+..... .. ....+|.+.|..+....+
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv--------- 70 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGV--------- 70 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT----------
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCc---------
Confidence 48999874 56789999854220 00 013567777777665431
Q ss_pred hhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCC--CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHhCCc
Q 013125 74 HVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLG--PSLEDLFVYCRRKFSLKTVLMLADQMIARIEY-VHSRGF 150 (449)
Q Consensus 74 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g--~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~-LH~~gi 150 (449)
.+|.++.+. ..+|||||++ |.....+... .++......++.+++..+.. +|..||
T Consensus 71 ----------------~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~gi 128 (188)
T PF01163_consen 71 ----------------PVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGI 128 (188)
T ss_dssp ----------------SS--EEEEE----TTEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTE
T ss_pred ----------------cCCcEEEEe----CCEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCc
Confidence 355555442 4589999997 5444333321 12234566777888885555 679999
Q ss_pred cccCCCCCcEEeecCCCCCeEEEEeecceeeec
Q 013125 151 LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183 (449)
Q Consensus 151 iHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~ 183 (449)
+|+||.+.|||+. .+.++|+|||.|....
T Consensus 129 vHGDLs~~NIlv~----~~~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 129 VHGDLSEYNILVD----DGKVYIIDFGQAVDSS 157 (188)
T ss_dssp EESS-STTSEEEE----TTCEEE--GTTEEETT
T ss_pred eecCCChhhEEee----cceEEEEecCcceecC
Confidence 9999999999994 4499999999987544
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.96 E-value=1.9e-08 Score=96.43 Aligned_cols=262 Identities=15% Similarity=0.224 Sum_probs=159.0
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
.-...++.||+|+-+.+|-.-. -+. .+-||......-.+ .+....|-...-..... +.+
T Consensus 11 e~i~~gr~LgqGgea~ly~l~e--~~d-~VAKIYh~Pppa~~----aqk~a~la~~p~~p~~~----------~rv---- 69 (637)
T COG4248 11 EPIPPGRPLGQGGEADLYTLGE--VRD-QVAKIYHAPPPAAQ----AQKVAELAATPDAPLLN----------YRV---- 69 (637)
T ss_pred cccCCCccccCCccceeeecch--hhc-hhheeecCCCchHH----HHHHHHhccCCCCcchh----------hhh----
Confidence 3345678899999999996532 222 34477654432211 11222222211111000 000
Q ss_pred cCCCcCeeEEecccCCe-eEEEEecCC--CCHHHHHHHh--c---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 013125 87 TLGGIPNIKWYGVDGED-NVLVLDLLG--PSLEDLFVYC--R---RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPD 158 (449)
Q Consensus 87 ~~~~i~~~~~~~~~~~~-~~lv~e~~g--~sL~~~~~~~--~---~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~ 158 (449)
--|.-..+|.++.. .-+.|..+. ....+++.-. . ..+.+...++.++.|+.+...||+.|.+-+|+.++
T Consensus 70 ---aWPqa~L~G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~ 146 (637)
T COG4248 70 ---AWPQATLHGGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQN 146 (637)
T ss_pred ---cccHHHhhCCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCcc
Confidence 01111223443333 567777772 2344444311 1 23788999999999999999999999999999999
Q ss_pred cEEeecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCcccccccccc-----CCCCCccchHHHHHHHHHHHH
Q 013125 159 NFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFL 233 (449)
Q Consensus 159 Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~~DvwSlG~il~el~ 233 (449)
|+|++ ++..|.|+|-..-....+... ..+-+|...|.+||.-. +..-+...|.|.||+++++++
T Consensus 147 ~~lVs---d~~~V~LVdsDsfqi~~ng~~--------~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL 215 (637)
T COG4248 147 SFLVS---DDSKVVLVDSDSFQINANGTL--------HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLL 215 (637)
T ss_pred ceeee---cCceEEEEcccceeeccCCce--------EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHH
Confidence 99996 788899988543222222111 23567889999999544 455677899999999999999
Q ss_pred hC-CCCCCCChhhc----HHH-HHH-------H-HHHhhcCCCHHHhhccChHHHHHHHHHHhCCC--CCCCCCHHHHHH
Q 013125 234 RG-SLPWQGLKAAT----KKQ-KYD-------K-ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLT--FDQRPDYGFLKR 297 (449)
Q Consensus 234 ~G-~~pf~~~~~~~----~~~-~~~-------~-i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--p~~Rp~~~~l~~ 297 (449)
.| +.||.|..... ..+ .+. . -.....+.|.+--+.-+|+.+..++.+|+... +.-||+.+.-..
T Consensus 216 ~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~a 295 (637)
T COG4248 216 FGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVA 295 (637)
T ss_pred hcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHH
Confidence 85 99998743211 111 100 0 01112222333233445889999999999754 568999987776
Q ss_pred HHHHHH
Q 013125 298 LFHDLF 303 (449)
Q Consensus 298 ~l~~~~ 303 (449)
.|..+-
T Consensus 296 Al~al~ 301 (637)
T COG4248 296 ALDALR 301 (637)
T ss_pred HHHHHH
Confidence 666553
No 449
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.95 E-value=1.2e-09 Score=101.12 Aligned_cols=177 Identities=12% Similarity=0.160 Sum_probs=117.7
Q ss_pred CeeEEEEecC-CCCHHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCcEEeecCCCCCeEEEEe
Q 013125 102 EDNVLVLDLL-GPSLEDLFV---YCRRKFSLKTVLMLADQMIARIEYVHSRG--FLHRDIKPDNFLMGLGRKANQVYIID 175 (449)
Q Consensus 102 ~~~~lv~e~~-g~sL~~~~~---~~~~~~~~~~~~~i~~qil~~L~~LH~~g--iiHrDLkp~Nill~~~~~~~~vkL~D 175 (449)
....++.||+ .+++..+++ ++...+......+|+.||+.||.|||++. |+|+++..+-|++. .++.+|+.-
T Consensus 145 ~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig~ 221 (458)
T KOG1266|consen 145 PRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIGS 221 (458)
T ss_pred cceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEecc
Confidence 4467899999 889988886 44566888999999999999999999985 99999999999994 566666532
Q ss_pred ecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCC-CCCChhhcHHHHHHHH
Q 013125 176 FGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP-WQGLKAATKKQKYDKI 254 (449)
Q Consensus 176 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~p-f~~~~~~~~~~~~~~i 254 (449)
-.-.. ..+...... -.+..--.+.+.|.+||.-.--+.+-.+|||+||....||..|..- -.+.......+.+..+
T Consensus 222 ~ap~s--~h~s~~~~~-~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~ 298 (458)
T KOG1266|consen 222 VAPDS--THPSVNSTR-EAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANV 298 (458)
T ss_pred cCccc--cchhhhhhh-HhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhh
Confidence 21111 000000000 0111223456788999987777778899999999999999987543 2222222222222211
Q ss_pred HHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCHHHH
Q 013125 255 CEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 295 (449)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~l 295 (449)
..... ..--+.++..|+.-.|..||++..+
T Consensus 299 i~~le-----------n~lqr~~i~kcl~~eP~~rp~ar~l 328 (458)
T KOG1266|consen 299 IIGLE-----------NGLQRGSITKCLEGEPNGRPDARLL 328 (458)
T ss_pred eeecc-----------CccccCcCcccccCCCCCCcchhhh
Confidence 11110 1223567889999999999998865
No 450
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.82 E-value=9e-08 Score=86.76 Aligned_cols=110 Identities=21% Similarity=0.295 Sum_probs=82.6
Q ss_pred chhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccC----CeeEEEEecC-C-CCHHHHH
Q 013125 46 HPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDG----EDNVLVLDLL-G-PSLEDLF 119 (449)
Q Consensus 46 ~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~lv~e~~-g-~sL~~~~ 119 (449)
.....+|...+..|....+ .+|....++... ...+||+|.+ + .+|.+++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi-------------------------~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~ 109 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGI-------------------------PTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLL 109 (206)
T ss_pred chHHHHHHHHHHHHHHcCC-------------------------CCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHH
Confidence 4457889888888875542 344444454432 3458999999 3 3688887
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecceee
Q 013125 120 VYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181 (449)
Q Consensus 120 ~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~ 181 (449)
..... .+......++.+++..+.-||+.||+|+|+++.|||+..++....+.|+||+.++.
T Consensus 110 ~~~~~-~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 110 QQWEQ-LDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred Hhhcc-cchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 75322 66777889999999999999999999999999999996433345899999988764
No 451
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.80 E-value=4.5e-08 Score=83.75 Aligned_cols=127 Identities=25% Similarity=0.456 Sum_probs=95.9
Q ss_pred EEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCC
Q 013125 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLG 89 (449)
Q Consensus 10 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (449)
+..+.||+|.+|.||++.+ .+..+|+|+...+.....+..|++++.+++...
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~-------------------------- 76 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEG-------------------------- 76 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcC--------------------------
Confidence 3457799999999999988 567899999998888888999999999999876
Q ss_pred CcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC--CcEEeecCC
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP--DNFLMGLGR 166 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp--~Nill~~~~ 166 (449)
..|.+++|+.+ .+.|||. |..|.++... .+.+++. .+++.---|-..||-|..|.- .||++
T Consensus 77 ~~p~vy~yg~~----~i~me~i~G~~L~~~~~~----~~rk~l~----~vlE~a~~LD~~GI~H~El~~~~k~vlv---- 140 (201)
T COG2112 77 VTPEVYFYGED----FIRMEYIDGRPLGKLEIG----GDRKHLL----RVLEKAYKLDRLGIEHGELSRPWKNVLV---- 140 (201)
T ss_pred CCceEEEechh----hhhhhhhcCcchhhhhhc----ccHHHHH----HHHHHHHHHHHhccchhhhcCCceeEEe----
Confidence 56777777754 3559999 6688776442 1233333 344443344557999999875 57777
Q ss_pred CCCeEEEEeeccee
Q 013125 167 KANQVYIIDFGLAK 180 (449)
Q Consensus 167 ~~~~vkL~DfGla~ 180 (449)
.++.++|+||..|+
T Consensus 141 ~~~~~~iIDFd~At 154 (201)
T COG2112 141 NDRDVYIIDFDSAT 154 (201)
T ss_pred cCCcEEEEEccchh
Confidence 45699999998876
No 452
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.78 E-value=6.6e-08 Score=86.57 Aligned_cols=145 Identities=20% Similarity=0.241 Sum_probs=90.3
Q ss_pred CcccCCceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchh-----------HHHHHHHHHHHcCCCcceeeEe
Q 013125 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-----------LLYEAKVYKILQGGSKIRLVVF 70 (449)
Q Consensus 2 ~~i~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~-----------~~~E~~~l~~l~~~~~~~~~~~ 70 (449)
+.++.++|.+.+.+-.....-|.+-.- +++.+++|.........+ ..+++..+..++.........
T Consensus 26 ~~i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~- 102 (229)
T PF06176_consen 26 EKILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPAD- 102 (229)
T ss_pred HHHHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccc-
Confidence 457889999999999988888887765 678899998665432211 122222222222211111000
Q ss_pred ecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 013125 71 HVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRG 149 (449)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~g 149 (449)
..+....--.......+|+|||+ |..|.++.. ++. .++..|..+|..||..|
T Consensus 103 ------------------~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G 155 (229)
T PF06176_consen 103 ------------------PYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHG 155 (229)
T ss_pred ------------------ceeeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcC
Confidence 00000111112234557899999 766665432 222 34566778899999999
Q ss_pred ccccCCCCCcEEeecCCCCCeEEEEeeccee
Q 013125 150 FLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180 (449)
Q Consensus 150 iiHrDLkp~Nill~~~~~~~~vkL~DfGla~ 180 (449)
+.|+|.+|.|++++ ++.++++||+..+
T Consensus 156 ~~HGD~hpgNFlv~----~~~i~iID~~~k~ 182 (229)
T PF06176_consen 156 FYHGDPHPGNFLVS----NNGIRIIDTQGKR 182 (229)
T ss_pred CccCCCCcCcEEEE----CCcEEEEECcccc
Confidence 99999999999994 5669999997653
No 453
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.76 E-value=2.8e-09 Score=108.10 Aligned_cols=154 Identities=14% Similarity=0.190 Sum_probs=109.4
Q ss_pred HHHHHHHHHHh-CCccccCCCCCcEEeecCCCCCeEEEEeecceeeecCCCCCccccccCC--CCCCCCccccccccccC
Q 013125 137 QMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN--KNLTGTARYASCNTHLG 213 (449)
Q Consensus 137 qil~~L~~LH~-~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~ 213 (449)
+.+.||.|+|. .++||++|.|++|.+ +..+..||+-|+.+.....+.......|... -...-...|.|||++..
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred cccchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34489999997 599999999999999 5889999999998765544322111112211 12234567999999999
Q ss_pred CCCCccchHHHHHHHHHHHH-hCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhCCCCCCCCCH
Q 013125 214 IEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 292 (449)
Q Consensus 214 ~~~s~~~DvwSlG~il~el~-~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~ 292 (449)
..-+.++|++|+||++|-+. .|+..+.+........ ............+..++|.++++-+...+..+..-||+.
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~----~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~ 259 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS----FSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL 259 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhh----hhhcccccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence 87899999999999999988 5777666543322111 112223333333446789999999999999999999976
Q ss_pred HHHHH
Q 013125 293 GFLKR 297 (449)
Q Consensus 293 ~~l~~ 297 (449)
..+..
T Consensus 260 ~~l~~ 264 (700)
T KOG2137|consen 260 DLLLS 264 (700)
T ss_pred hhhhc
Confidence 65533
No 454
>PRK09902 hypothetical protein; Provisional
Probab=98.73 E-value=4.2e-07 Score=81.19 Aligned_cols=137 Identities=13% Similarity=0.112 Sum_probs=97.8
Q ss_pred cccCceeEEEEEEcCCCceEEEEEecC--------CCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhccc
Q 013125 16 GSGSFGEIFLASHVDTNEIVAVKIENS--------GTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSST 87 (449)
Q Consensus 16 G~G~fg~Vy~a~~~~~~~~vAvKv~~~--------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (449)
|+||-+-|+.... .|+.+=+|...+ ....+.+.+|...++.|....+
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~Gv----------------------- 81 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGV----------------------- 81 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCC-----------------------
Confidence 6799999998765 344577775431 1245668999999999976652
Q ss_pred CCCcCeeEEeccc----CCeeEEEEecCC--CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcE
Q 013125 88 LGGIPNIKWYGVD----GEDNVLVLDLLG--PSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 160 (449)
Q Consensus 88 ~~~i~~~~~~~~~----~~~~~lv~e~~g--~sL~~~~~~~~-~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Ni 160 (449)
.+|.+.+++.. .-..+||+|-++ .+|.+++.... .+.+......++.+++..|.-||+.|+.|+|+-+.||
T Consensus 82 --PVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khI 159 (216)
T PRK09902 82 --IVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHI 159 (216)
T ss_pred --CCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhhe
Confidence 23344433322 234689999886 68888775422 3457777789999999999999999999999999999
Q ss_pred EeecCCCCCeEEEEeeccee
Q 013125 161 LMGLGRKANQVYIIDFGLAK 180 (449)
Q Consensus 161 ll~~~~~~~~vkL~DfGla~ 180 (449)
++... +...++++||--++
T Consensus 160 ll~~~-g~~~v~lIDlEk~r 178 (216)
T PRK09902 160 YVKTE-GKAEAGFLDLEKSR 178 (216)
T ss_pred eecCC-CCeeEEEEEhhccc
Confidence 99421 12349999996543
No 455
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.69 E-value=2e-07 Score=85.21 Aligned_cols=133 Identities=22% Similarity=0.363 Sum_probs=95.3
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCC----------------CCc--------hhHHHHHHHHHHHcCCCc
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----------------TKH--------PQLLYEAKVYKILQGGSK 64 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----------------~~~--------~~~~~E~~~l~~l~~~~~ 64 (449)
+.++.+||-|--+.||.|.+. .+.++|||.-... ..+ ....+|.++|+.|.....
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 457899999999999999986 6888999962211 001 124678888888865420
Q ss_pred ceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 013125 65 IRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIE 143 (449)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~ 143 (449)
.+|.. ...+..++|||+. |.-|..+ +++.+....++..|++-+.
T Consensus 172 -------------------------~VP~P----~~~nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~il~~~~ 216 (304)
T COG0478 172 -------------------------KVPKP----IAWNRHAVVMEYIEGVELYRL------RLDVENPDEILDKILEEVR 216 (304)
T ss_pred -------------------------CCCCc----cccccceeeeehcccceeecc------cCcccCHHHHHHHHHHHHH
Confidence 12222 2346789999999 4433332 2245666677778888887
Q ss_pred HHHhCCccccCCCCCcEEeecCCCCCeEEEEeeccee
Q 013125 144 YVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180 (449)
Q Consensus 144 ~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~ 180 (449)
-+-..|+||+|+.+=||+++ ++|.++++||-.+.
T Consensus 217 ~~~~~GiVHGDlSefNIlV~---~dg~~~vIDwPQ~v 250 (304)
T COG0478 217 KAYRRGIVHGDLSEFNILVT---EDGDIVVIDWPQAV 250 (304)
T ss_pred HHHHcCccccCCchheEEEe---cCCCEEEEeCcccc
Confidence 77789999999999999995 78899999996553
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.52 E-value=2.2e-06 Score=78.74 Aligned_cols=72 Identities=18% Similarity=0.143 Sum_probs=54.6
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCcC
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIP 92 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 92 (449)
.+||.|..+.||+. .+..+++|+...........+|.++++.+..... -+|
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~gl-------------------------pvP 57 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGI-------------------------PTP 57 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCC-------------------------CCC
Confidence 57899999999984 2446789987765555678999999999875431 356
Q ss_pred eeEEecccCCeeEEEEecCCC
Q 013125 93 NIKWYGVDGEDNVLVLDLLGP 113 (449)
Q Consensus 93 ~~~~~~~~~~~~~lv~e~~g~ 113 (449)
.+..++...+...+|||++.|
T Consensus 58 ~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 58 HPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred ceEEEEecCCeeeeeeeecCC
Confidence 677777777778899999944
No 457
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.49 E-value=1.8e-06 Score=78.33 Aligned_cols=77 Identities=22% Similarity=0.352 Sum_probs=57.3
Q ss_pred CeeEEEEecCCCCHH--HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCcEEeecCCCCCeEEEEeecc
Q 013125 102 EDNVLVLDLLGPSLE--DLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 178 (449)
Q Consensus 102 ~~~~lv~e~~g~sL~--~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~-~giiHrDLkp~Nill~~~~~~~~vkL~DfGl 178 (449)
....|||||+|..-. -.++ .-.+....+..+..+++..++-|-. .|+||+||..=|||+ .++.++++|||.
T Consensus 139 ~~nVLvMEfIg~~g~pAP~Lk--Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~----~~~~p~iID~~Q 212 (268)
T COG1718 139 RNNVLVMEFIGDDGLPAPRLK--DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILV----HDGEPYIIDVSQ 212 (268)
T ss_pred cCCeEEEEeccCCCCCCCCcc--cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEE----ECCeEEEEECcc
Confidence 456899999965411 1111 1123344678888899999998887 899999999999999 478999999999
Q ss_pred eeeecC
Q 013125 179 AKKYRD 184 (449)
Q Consensus 179 a~~~~~ 184 (449)
|.....
T Consensus 213 aV~~~h 218 (268)
T COG1718 213 AVTIDH 218 (268)
T ss_pred ccccCC
Confidence 865543
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.49 E-value=5.1e-07 Score=91.84 Aligned_cols=162 Identities=21% Similarity=0.346 Sum_probs=91.6
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcC----CCc----ceee--------------Ee
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG----GSK----IRLV--------------VF 70 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~----~~~----~~~~--------------~~ 70 (449)
+.|+.++-|.||.|+.. +|+.|||||...+ -.+.+...+++|+.+.. ... .... ..
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPg-i~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy 208 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPG-IRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY 208 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCC-hHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence 57889999999999975 4999999997653 12233333333333210 000 0000 00
Q ss_pred ecchhhhhhhhhhhcc-cCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 013125 71 HVDHVIIHALTIIFSS-TLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR 148 (449)
Q Consensus 71 ~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~ 148 (449)
..+-.+...+...+.. ..=.+|.++| ......+|+|||+ |..+.++.......++.+.+...+.++. +..+-..
T Consensus 209 ~~EA~n~~~~~~nf~~~~~v~VP~V~w--e~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~d 284 (517)
T COG0661 209 RREAANAERFRENFKDDPDVYVPKVYW--EYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHHHcCCCCCeEeceeeh--hccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhc
Confidence 0000000001111110 0113455544 3345679999999 6666666432234566444444333332 4445558
Q ss_pred CccccCCCCCcEEeecCCCCCeEEEEeecceeeec
Q 013125 149 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 183 (449)
Q Consensus 149 giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~ 183 (449)
|+.|.|.+|.||++ +.++.+.+.|||+.....
T Consensus 285 gffHaDpHpGNi~v---~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 285 GFFHADPHPGNILV---RSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred CccccCCCccceEE---ecCCcEEEEcCcceecCC
Confidence 99999999999999 477999999999986543
No 459
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.46 E-value=2.2e-05 Score=77.76 Aligned_cols=166 Identities=18% Similarity=0.238 Sum_probs=118.0
Q ss_pred eeEEEEEEcCCCceEEEEEecCCCCc-h-hHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCcCeeEEec
Q 013125 21 GEIFLASHVDTNEIVAVKIENSGTKH-P-QLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYG 98 (449)
Q Consensus 21 g~Vy~a~~~~~~~~vAvKv~~~~~~~-~-~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 98 (449)
.+.|+|....+|..|++|.+..+... . .-..-++..+++.|.+++.+..+... +.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t-----------------------~t 346 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLT-----------------------YT 346 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhh-----------------------hc
Confidence 47899999999999999988432110 0 12344678889999997766443221 11
Q ss_pred ccCCeeEEEEecC--CCCHHHHHHHh--------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEe
Q 013125 99 VDGEDNVLVLDLL--GPSLEDLFVYC--------------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 162 (449)
Q Consensus 99 ~~~~~~~lv~e~~--g~sL~~~~~~~--------------~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill 162 (449)
-.+...++|++|+ .++|.++.-.. +.+.++..++.++.||..||.++|+.|+.-+-|.+.+||+
T Consensus 347 F~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv 426 (655)
T KOG3741|consen 347 FGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV 426 (655)
T ss_pred cCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe
Confidence 2346789999999 66777765211 2346788999999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCC
Q 013125 163 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 236 (449)
Q Consensus 163 ~~~~~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~ 236 (449)
. ...+++|+--|..-......+ +.+. .-.+-|.=-||.++..|.||.
T Consensus 427 ~---G~~RIriS~C~i~Dvl~~d~~---------------------~~le---~~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 427 T---GKMRIRISGCGIMDVLQEDPT---------------------EPLE---SQQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred e---CcceEEEecccceeeecCCCC---------------------cchh---HHhhhhHHHHHHHHHHHhhcc
Confidence 4 445788877766554433221 1111 122579999999999999984
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.31 E-value=8.4e-06 Score=74.92 Aligned_cols=79 Identities=18% Similarity=0.222 Sum_probs=53.1
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCc
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGI 91 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 91 (449)
++.|+.|..+.||++.... ..+++|+.........+.+|..+++.|....+ .+
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~-------------------------pv 54 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGI-------------------------PV 54 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTS-------------------------BS
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCC-------------------------CC
Confidence 5789999999999998744 58899986654233467889999998875542 13
Q ss_pred CeeEEec---ccCCeeEEEEecC-CCCHHH
Q 013125 92 PNIKWYG---VDGEDNVLVLDLL-GPSLED 117 (449)
Q Consensus 92 ~~~~~~~---~~~~~~~lv~e~~-g~sL~~ 117 (449)
|.+..+. ......+++|+++ |..+..
T Consensus 55 P~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 55 PRVLAFDTSDEFNGFPYLLMEYIPGRPLDD 84 (239)
T ss_dssp --EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred ceEEeecccccccccceEEEEEeccccccc
Confidence 3343322 2333468999999 555554
No 461
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.29 E-value=7.1e-06 Score=83.39 Aligned_cols=89 Identities=24% Similarity=0.435 Sum_probs=61.3
Q ss_pred cCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecC-CCC
Q 013125 91 IPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG-RKA 168 (449)
Q Consensus 91 i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~-~~~ 168 (449)
+|.++|.. ....+|+|||+ |..+.|+-.-....++...+...+.++. ++.|-..|++|+|-+|.||++... +.+
T Consensus 266 VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~--~~qIf~~GffHaDPHPGNilv~~~~~~~ 341 (538)
T KOG1235|consen 266 VPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAY--LEQIFKTGFFHADPHPGNILVRPNPEGD 341 (538)
T ss_pred CCeehhhc--CcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHH--HHHHHhcCCccCCCCCCcEEEecCCCCC
Confidence 67766543 35679999999 6655554332345677776655555443 344455789999999999999632 247
Q ss_pred CeEEEEeecceeeec
Q 013125 169 NQVYIIDFGLAKKYR 183 (449)
Q Consensus 169 ~~vkL~DfGla~~~~ 183 (449)
..+.+.|||+.....
T Consensus 342 ~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 342 EEIVLLDHGLYAVIS 356 (538)
T ss_pred ccEEEEccccccccc
Confidence 789999999986544
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.26 E-value=1.5e-05 Score=74.19 Aligned_cols=75 Identities=23% Similarity=0.311 Sum_probs=53.1
Q ss_pred eeecccCc-eeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCc
Q 013125 13 RKIGSGSF-GEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGI 91 (449)
Q Consensus 13 ~~LG~G~f-g~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 91 (449)
..|-.|.. ..||++.. .+..+.||+..... ...+.+|+++++.+.... -+
T Consensus 4 ~~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~--------------------------~v 54 (244)
T cd05150 4 ERVTEGQSGATVYRLDG--KNPGLYLKIAPSGP-TYELEREAERLRWLAGKL--------------------------PV 54 (244)
T ss_pred eecCCCCCcCeEEEEcC--CCCcEEEEecCCCc-ccchHHHHHHHHHHHhcC--------------------------CC
Confidence 34556666 78999975 34678899875543 345788999999886432 56
Q ss_pred CeeEEecccCCeeEEEEecC-CCCHH
Q 013125 92 PNIKWYGVDGEDNVLVLDLL-GPSLE 116 (449)
Q Consensus 92 ~~~~~~~~~~~~~~lv~e~~-g~sL~ 116 (449)
|.+..++...+..++|||++ |.++.
T Consensus 55 P~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 55 PEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred CeEEEEEecCCccEEEEEeeCCccHh
Confidence 77777776666789999999 65554
No 463
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.15 E-value=6.7e-05 Score=67.11 Aligned_cols=133 Identities=19% Similarity=0.261 Sum_probs=92.3
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCCC------------------CchhHHHHHHHHHHHc-CCCcceeeEeec
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT------------------KHPQLLYEAKVYKILQ-GGSKIRLVVFHV 72 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~------------------~~~~~~~E~~~l~~l~-~~~~~~~~~~~~ 72 (449)
...||+|+.-.||.-- . +....|||..... ...+..+|+..+..+. ......
T Consensus 6 ~~~i~~G~~R~cy~HP--~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~------ 76 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP--D-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDW------ 76 (199)
T ss_pred CcccccCCCceEEECC--C-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcc------
Confidence 3568999999999543 2 3335789877654 2456788888888877 433221
Q ss_pred chhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-------CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 013125 73 DHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-------GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYV 145 (449)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-------g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~L 145 (449)
.+++.++.+-......-+|+|.. ..+|.+++. ...++. ..... +-+-.+||
T Consensus 77 ----------------~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~--~~~~~~-~~~~~---L~~f~~~l 134 (199)
T PF10707_consen 77 ----------------SHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLK--EGGLTE-ELRQA---LDEFKRYL 134 (199)
T ss_pred ----------------cccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHH--cCCccH-HHHHH---HHHHHHHH
Confidence 16777777777777778888887 236777764 334554 33333 33445688
Q ss_pred HhCCccccCCCCCcEEeecCCCCC-eEEEEe
Q 013125 146 HSRGFLHRDIKPDNFLMGLGRKAN-QVYIID 175 (449)
Q Consensus 146 H~~giiHrDLkp~Nill~~~~~~~-~vkL~D 175 (449)
-+.+|+.+||+|.||++...++.. .+.|+|
T Consensus 135 ~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 135 LDHHIVIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred HHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence 899999999999999998765555 788888
No 464
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.09 E-value=2.9e-05 Score=71.86 Aligned_cols=45 Identities=16% Similarity=0.141 Sum_probs=31.9
Q ss_pred eeeecccCce-eEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcC
Q 013125 12 GRKIGSGSFG-EIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61 (449)
Q Consensus 12 ~~~LG~G~fg-~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~ 61 (449)
++.|+.|+.. .||+.. ..+++|+.........+.+|.++++.|..
T Consensus 2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~~~~~~~~E~~~l~~L~~ 47 (235)
T cd05155 2 IEPVDSGGTDNATFRLG-----DDMSVRLPSAAGYAGQVRKEQRWLPRLAP 47 (235)
T ss_pred ceeccCCCcccceEEcC-----CceEEEcCCccchHHHHHHHHHHHHHHhc
Confidence 3567877777 499762 34678986554344568999999999875
No 465
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.98 E-value=0.00015 Score=64.35 Aligned_cols=145 Identities=17% Similarity=0.175 Sum_probs=89.3
Q ss_pred CceEEeeeecccCc-eeEEEEEEcCCCceEEEEEecC---C--------------------CCchhHHHHHHHHHHHcCC
Q 013125 7 VKYKLGRKIGSGSF-GEIFLASHVDTNEIVAVKIENS---G--------------------TKHPQLLYEAKVYKILQGG 62 (449)
Q Consensus 7 ~~y~i~~~LG~G~f-g~Vy~a~~~~~~~~vAvKv~~~---~--------------------~~~~~~~~E~~~l~~l~~~ 62 (449)
..++.++.||.|.- |.||+++. .|+.+|||+... . ...+.+..|.+.+-+|+..
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 68999999999999 99999987 678999999221 0 0112477899999988877
Q ss_pred CcceeeE-eecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 013125 63 SKIRLVV-FHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIAR 141 (449)
Q Consensus 63 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~ 141 (449)
+...++. .|..-.....-..+.....+ ...+.......||-||....- .++.. -+.+|++-
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~-----~~~~~~~~~~aIVKD~v~~~~---------~~~~~----~~~~~~~d 176 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQR-----GSDHRPLPIRAIVKDFVPDDP---------PLQIR----DIPQMLRD 176 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcc-----cccCCCCccEEEEEeecCCcc---------ccchh----HHHHHHHH
Confidence 7644422 12111111100000000000 000112223467888773221 22322 34567788
Q ss_pred HHHHHhCCccccCCCCCcEEeecCCCCCeEEEEeecce
Q 013125 142 IEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179 (449)
Q Consensus 142 L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla 179 (449)
|..+|..||+-+|+++.|..= -+|+|||.+
T Consensus 177 l~~~~k~gI~~~Dv~~~ny~~--------G~lvDfs~~ 206 (207)
T PF13095_consen 177 LKILHKLGIVPRDVKPRNYRG--------GKLVDFSSS 206 (207)
T ss_pred HHHHHHCCeeeccCccccccC--------CEEEecccC
Confidence 899999999999999999863 279999865
No 466
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.98 E-value=1.7e-06 Score=87.48 Aligned_cols=185 Identities=10% Similarity=0.009 Sum_probs=130.6
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccC
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTL 88 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (449)
|...+-+++|+++.+++.+...+...+ .+++... ....-++++|.+.++++..-.
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~---l~~rl~~eLLdK~n~P~~~v~--------------------- 298 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT---LSRRLAIELLDKVNNPNPVVR--------------------- 298 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc---hhhHHHHHHHHHccCCCCccc---------------------
Confidence 344556789999999999887666655 6765432 345567889999988871110
Q ss_pred CCcCeeEEecccCCeeEEEEecCCCC--HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCC
Q 013125 89 GGIPNIKWYGVDGEDNVLVLDLLGPS--LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 166 (449)
Q Consensus 89 ~~i~~~~~~~~~~~~~~lv~e~~g~s--L~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~ 166 (449)
...-...+.+.+++++++++. ....+.-..-.|..-+...+.+.-+.++++||+.-=+||| ||+.
T Consensus 299 -----~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~---- 365 (829)
T KOG0576|consen 299 -----YLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILG---- 365 (829)
T ss_pred -----ccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccc----
Confidence 011123456778999999332 3222221122244455566777788899999997668888 8887
Q ss_pred CCCeEEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCC
Q 013125 167 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW 239 (449)
Q Consensus 167 ~~~~vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf 239 (449)
.....++.||+....+.... ..+...+|+.+++||+.....+....|+|++|.-..++.-|-+|-
T Consensus 366 s~~~~~~~~~~v~~~L~~~~--------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 366 SEEEVKLLDFAVPPQLTRTM--------KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred cccccccccccCCcccCccc--------ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 56788999999876554432 135778999999999999999999999999998888888776654
No 467
>PLN02876 acyl-CoA dehydrogenase
Probab=97.81 E-value=0.00034 Score=76.66 Aligned_cols=78 Identities=14% Similarity=0.198 Sum_probs=51.6
Q ss_pred EeeeecccCceeEEEEEEcCCC--ceEEEEEecCCC---CchhHHHHHHHHHHHcC-CCcceeeEeecchhhhhhhhhhh
Q 013125 11 LGRKIGSGSFGEIFLASHVDTN--EIVAVKIENSGT---KHPQLLYEAKVYKILQG-GSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~~~--~~vAvKv~~~~~---~~~~~~~E~~~l~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
-+++|+.|.+..+|+......+ ..+++|+..... ....+.+|.++++.|.. ..+
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~v-------------------- 101 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDV-------------------- 101 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCC--------------------
Confidence 4678899999999998764332 357778654322 22357899999999863 321
Q ss_pred cccCCCcCeeEEecccC---CeeEEEEecCCC
Q 013125 85 SSTLGGIPNIKWYGVDG---EDNVLVLDLLGP 113 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~---~~~~lv~e~~g~ 113 (449)
-+|.++.++.+. ...|+|||++.|
T Consensus 102 -----pVP~v~~~~~d~~v~G~~flVME~v~G 128 (822)
T PLN02876 102 -----PVPKVYCLCTDASVIGTAFYIMEYLEG 128 (822)
T ss_pred -----CCCcEEEEecCCCcCCCceEEEEecCC
Confidence 345555554432 356899999943
No 468
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.73 E-value=0.00032 Score=67.26 Aligned_cols=140 Identities=20% Similarity=0.236 Sum_probs=92.7
Q ss_pred EeeeecccCceeEEEEEEcCCCceEEEEEecCC---------------------CC-ch------hHHHHHHHHHHHcCC
Q 013125 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG---------------------TK-HP------QLLYEAKVYKILQGG 62 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~---------------------~~-~~------~~~~E~~~l~~l~~~ 62 (449)
|-..|..|--+.||.|.. .+|..+||||.+.. +. .+ ....|++-|++|+..
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 344566788889999985 46777999985421 11 11 135677777777665
Q ss_pred CcceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 013125 63 SKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARI 142 (449)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L 142 (449)
.+.. |.. ..-...+|||+|+|.+-...-+-....++...+..+-.|++.-|
T Consensus 227 GIP~-------------------------PeP----IlLk~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~M 277 (520)
T KOG2270|consen 227 GIPC-------------------------PEP----ILLKNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIM 277 (520)
T ss_pred CCCC-------------------------CCc----eeeecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHH
Confidence 4211 000 01144689999997542221111133467777878878888888
Q ss_pred HHHH-hCCccccCCCCCcEEeecCCCCCeEEEEeecceeeecC
Q 013125 143 EYVH-SRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 184 (449)
Q Consensus 143 ~~LH-~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~~~~~ 184 (449)
.-|- .+++||.||.-=|+|+ -.|.++++|.+.|.....
T Consensus 278 R~lY~~c~LVHADLSEfN~Ly----hdG~lyiIDVSQSVE~DH 316 (520)
T KOG2270|consen 278 RRLYQKCRLVHADLSEFNLLY----HDGKLYIIDVSQSVEHDH 316 (520)
T ss_pred HHHHHHhceeccchhhhhheE----ECCEEEEEEccccccCCC
Confidence 7765 4899999999999999 579999999998864433
No 469
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.66 E-value=0.00057 Score=67.78 Aligned_cols=75 Identities=25% Similarity=0.265 Sum_probs=52.5
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCC---------CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhh
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSG---------TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTI 82 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (449)
.+.||.|.+..||++.+...++.|+||.-... ...++...|.+.|+.+....
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~------------------- 91 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYV------------------- 91 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhC-------------------
Confidence 46899999999999998654468999974311 12345677888888765321
Q ss_pred hhcccCCCcCeeEEecccCCeeEEEEecCC
Q 013125 83 IFSSTLGGIPNIKWYGVDGEDNVLVLDLLG 112 (449)
Q Consensus 83 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g 112 (449)
.+.+|.++.++. +..++|||++.
T Consensus 92 -----p~~VPkV~~~D~--~~~~lVME~L~ 114 (401)
T PRK09550 92 -----PDLVPKVYHYDE--ELAVTVMEDLS 114 (401)
T ss_pred -----CCCCCeEEEECC--CCCEEEEecCC
Confidence 115777877754 55789999983
No 470
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.53 E-value=0.00063 Score=63.78 Aligned_cols=48 Identities=10% Similarity=0.058 Sum_probs=33.0
Q ss_pred eecccCceeEEEEEEcCCCceEEEEEecCCCCc--hhHHHHHHHHHHHcCCC
Q 013125 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH--PQLLYEAKVYKILQGGS 63 (449)
Q Consensus 14 ~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~--~~~~~E~~~l~~l~~~~ 63 (449)
.+..|-...+|+... +++.+++|+....... -...+|.++++.+....
T Consensus 3 ~~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g 52 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALG 52 (256)
T ss_pred cCCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcC
Confidence 456688889998873 5667889975543222 13578999999887543
No 471
>PRK05231 homoserine kinase; Provisional
Probab=97.53 E-value=0.0025 Score=61.75 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=33.1
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCC
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~ 62 (449)
.+.|+.|....+|++... +..+++|+.. ......+..|..+++.|...
T Consensus 27 ~~~l~~G~~n~~y~v~t~--~g~~vLK~~~-~~~~~~l~~~~~~l~~L~~~ 74 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTT--QGEYVLTLFE-RLTAEDLPFFLGLMQHLAAR 74 (319)
T ss_pred cchhccccccceEEEEeC--CCcEEEEEec-cCChHHhHHHHHHHHHHHHC
Confidence 456777877899998753 3368899875 33344566788888888644
No 472
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.51 E-value=0.0018 Score=59.80 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=35.8
Q ss_pred eeeecccCceeEEEEEEcC-CCceEEEEEecCCCCc-hhHHHHHHHHHHHcCCC
Q 013125 12 GRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKH-PQLLYEAKVYKILQGGS 63 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~-~~~~vAvKv~~~~~~~-~~~~~E~~~l~~l~~~~ 63 (449)
++.|..|-...||++.... .++.|++|+....... -...+|+.+++.+....
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~g 56 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHG 56 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCC
Confidence 4677888888999997532 3567899986543221 23457899998886544
No 473
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.34 E-value=0.0034 Score=60.56 Aligned_cols=51 Identities=14% Similarity=0.079 Sum_probs=35.3
Q ss_pred EEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCC
Q 013125 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62 (449)
Q Consensus 10 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~ 62 (449)
..++.++.|.-..||++.. . +..+++|+.........+..|.++++.|...
T Consensus 25 ~~i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~ 75 (307)
T TIGR00938 25 LSLKGIAEGVENSNYLLTT-D-VGRYILTLYEKRVKAEELPFFLALTTHLAAR 75 (307)
T ss_pred eeccccCCccccceEEEEe-C-CCcEEEEEecCCCCHHHHHHHHHHHHHHHHC
Confidence 3456777787789999864 2 3357789876543345677888888888644
No 474
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.32 E-value=0.0036 Score=60.92 Aligned_cols=72 Identities=17% Similarity=0.150 Sum_probs=47.7
Q ss_pred eecccCceeEEEEEEcCCCceEEEEEec----C-----CCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhh
Q 013125 14 KIGSGSFGEIFLASHVDTNEIVAVKIEN----S-----GTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIF 84 (449)
Q Consensus 14 ~LG~G~fg~Vy~a~~~~~~~~vAvKv~~----~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (449)
.||.|....||++.+...++.|+||.-. . .-..++...|...|+......
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~--------------------- 60 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHV--------------------- 60 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccC---------------------
Confidence 5799999999999985444679999521 1 122345677888887654321
Q ss_pred cccCCCcCeeEEecccCCeeEEEEecC
Q 013125 85 SSTLGGIPNIKWYGVDGEDNVLVLDLL 111 (449)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~~~~lv~e~~ 111 (449)
.+.+|.++.|. .+..++|||++
T Consensus 61 ---P~~vP~vy~~D--~e~~~~vMEdL 82 (370)
T TIGR01767 61 ---PHLVPRIFHFD--TEMAVTVMEDL 82 (370)
T ss_pred ---ccccCeEEEEc--cccceehHhhC
Confidence 11466666654 45567999998
No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.29 E-value=0.0036 Score=59.99 Aligned_cols=50 Identities=8% Similarity=0.050 Sum_probs=36.6
Q ss_pred EeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCC
Q 013125 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS 63 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~ 63 (449)
-.+.|..|....+|++.. .+..+++|+... .....+..|+++++.|.+..
T Consensus 18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~-~~~~~~~~e~~~l~~L~~~g 67 (296)
T cd05153 18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEK-VSAEELPFFLALLDHLAERG 67 (296)
T ss_pred heecccCccccceEEEEe--CCCcEEEEEcCC-CChHhccHHHHHHHHHHHCC
Confidence 366777888889999865 344688998765 34456788999999986543
No 476
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.19 E-value=0.0014 Score=58.28 Aligned_cols=83 Identities=19% Similarity=0.212 Sum_probs=60.5
Q ss_pred CcCeeEEecccCCeeEEEEecCC-CCHHHH----HHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCCCcEE
Q 013125 90 GIPNIKWYGVDGEDNVLVLDLLG-PSLEDL----FVYCRRKFSLKTVLMLADQMIARIEYVHS---RGFLHRDIKPDNFL 161 (449)
Q Consensus 90 ~i~~~~~~~~~~~~~~lv~e~~g-~sL~~~----~~~~~~~~~~~~~~~i~~qil~~L~~LH~---~giiHrDLkp~Nil 161 (449)
.+|++.+++ ..++|.|+.+ +++... .. -...++....+++.+++..+++|+. ..+.-.|++++||.
T Consensus 21 ~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~--~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfg 94 (188)
T PF12260_consen 21 PFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQ--FLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFG 94 (188)
T ss_pred CCCCeeeEC----CCEEEEEeecCcccccccccccc--ccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeE
Confidence 455554443 2367889985 344311 11 1236899999999999999999997 34777999999999
Q ss_pred eecCCCCCeEEEEeecceee
Q 013125 162 MGLGRKANQVYIIDFGLAKK 181 (449)
Q Consensus 162 l~~~~~~~~vkL~DfGla~~ 181 (449)
+. +++.+|++|......
T Consensus 95 v~---~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 95 VN---DDGRLKLIDLDDVFV 111 (188)
T ss_pred Ee---CCCcEEEEechhcch
Confidence 94 778999999987654
No 477
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.13 E-value=0.0023 Score=69.65 Aligned_cols=200 Identities=16% Similarity=0.121 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCC
Q 013125 49 LLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFS 127 (449)
Q Consensus 49 ~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~ 127 (449)
.+.|...+..+.|.+....+.......+. +-...+..++| +.++..++.. ...++
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~-----------------------g~~~~v~~~~~s~~~~~~~~q~-v~~i~ 284 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFR-----------------------GIVLDVLQEICSKVELRSLLQS-VGSIP 284 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcc-----------------------hHHHHHHHhhcCccchHHHHhh-ccccC
Confidence 45667777778887766554433222100 00112233555 5566665554 56688
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEeecCCCCCeEEEE--eecceeeecCCCCCccccccCCCCCCCCccc
Q 013125 128 LKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII--DFGLAKKYRDPTTNRHIPYRENKNLTGTARY 205 (449)
Q Consensus 128 ~~~~~~i~~qil~~L~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~--DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y 205 (449)
..+++.+..++++||.|+|+..+.|.-|...-..-...+..+.+.++ ||+.+..+.+.... .....+..+
T Consensus 285 ~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~--------~~~~~~~~~ 356 (1351)
T KOG1035|consen 285 LETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS--------FSDLLAEIR 356 (1351)
T ss_pred HHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCcccc--------hhhcCcccc
Confidence 99999999999999999999866665444442211111344555655 88888766554322 123334567
Q ss_pred cccccccCCCCCc--cchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcCCCHHHhhccChHHHHHHHHHHhC
Q 013125 206 ASCNTHLGIEQSR--RDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQS 283 (449)
Q Consensus 206 ~aPE~~~~~~~s~--~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 283 (449)
.++|......+.. ..|+|.+|..+..+..|..+-.. ...+...++.....+..+....|+.
T Consensus 357 ~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~-----------------~~~~~~~l~~~~~~~~~d~~~~~~~ 419 (1351)
T KOG1035|consen 357 NADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEK-----------------SAVPVSLLDVLSTSELLDALPKCLD 419 (1351)
T ss_pred ccccccccccchhhhhhHHHHHHHHHhhhhhcCccccc-----------------ccchhhhhccccchhhhhhhhhhcc
Confidence 7888777665544 47999999999999987543211 0111112222222356778888998
Q ss_pred CCCCCCCCHHHHHH
Q 013125 284 LTFDQRPDYGFLKR 297 (449)
Q Consensus 284 ~~p~~Rp~~~~l~~ 297 (449)
.+.++|++..++..
T Consensus 420 ~~~~~Rl~~~~ll~ 433 (1351)
T KOG1035|consen 420 EDSEERLSALELLT 433 (1351)
T ss_pred hhhhhccchhhhhh
Confidence 88999998776644
No 478
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.09 E-value=0.0083 Score=57.66 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=36.4
Q ss_pred eeeecccCceeEEEEEEcC------CCceEEEEEecCCCC-chhHHHHHHHHHHHcCCC
Q 013125 12 GRKIGSGSFGEIFLASHVD------TNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGS 63 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~------~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~ 63 (449)
++.|..|--..||++.... +++.+++|+...... .....+|.++++.+....
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g 61 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERN 61 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCC
Confidence 4566667777999987533 257899999765432 235688999999987654
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.09 E-value=0.00046 Score=65.15 Aligned_cols=133 Identities=20% Similarity=0.313 Sum_probs=87.9
Q ss_pred ceEEeeeecccCceeEEEEEEcCCCceEEEEEecCC----------C---------Cch-----hHHHHHHHHHHHcCCC
Q 013125 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----------T---------KHP-----QLLYEAKVYKILQGGS 63 (449)
Q Consensus 8 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~----------~---------~~~-----~~~~E~~~l~~l~~~~ 63 (449)
-+.++++||-|--+.||.+-+. .|...++|+-... . .+- ...+|...|+.|....
T Consensus 93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 3678899999999999999874 5777889962110 0 000 1245666666665432
Q ss_pred cceeeEeecchhhhhhhhhhhcccCCCcCeeEEecccCCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 013125 64 KIRLVVFHVDHVIIHALTIIFSSTLGGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARI 142 (449)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L 142 (449)
. -+|.. .+.+..|+|||++ |-.|..+.. --. +..+...+..-|
T Consensus 172 f-------------------------pVPkp----iD~~RH~Vvmelv~g~Pl~~v~~----v~d---~~~ly~~lm~~I 215 (465)
T KOG2268|consen 172 F-------------------------PVPKP----IDHNRHCVVMELVDGYPLRQVRH----VED---PPTLYDDLMGLI 215 (465)
T ss_pred C-------------------------CCCCc----ccccceeeHHHhhcccceeeeee----cCC---hHHHHHHHHHHH
Confidence 0 12221 2446779999999 666654421 112 233444555556
Q ss_pred HHHHhCCccccCCCCCcEEeecCCCCCeEEEEeeccee
Q 013125 143 EYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 180 (449)
Q Consensus 143 ~~LH~~giiHrDLkp~Nill~~~~~~~~vkL~DfGla~ 180 (449)
.-|-..|+||+|..-=|||+. +++.++++||-...
T Consensus 216 v~la~~GlIHgDFNEFNimv~---dd~~i~vIDFPQmv 250 (465)
T KOG2268|consen 216 VRLANHGLIHGDFNEFNIMVK---DDDKIVVIDFPQMV 250 (465)
T ss_pred HHHHHcCceecccchheeEEe---cCCCEEEeechHhh
Confidence 778889999999999999994 68899999996543
No 480
>PRK10593 hypothetical protein; Provisional
Probab=97.03 E-value=0.0083 Score=57.54 Aligned_cols=110 Identities=16% Similarity=0.106 Sum_probs=74.2
Q ss_pred CceEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcc
Q 013125 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSS 86 (449)
Q Consensus 7 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (449)
..-.-.+.||.|..+.||.... .+..+.+|+.+.......+..|+..++.|.....+
T Consensus 14 ~~~~~~~~i~~G~~~~vy~~~~--~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~v--------------------- 70 (297)
T PRK10593 14 EKLSRVECISEQPYAALWALYD--SQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTV--------------------- 70 (297)
T ss_pred hhhheeeecCCccceeEEEEEc--CCCCEEEEEecccccchHHHHHHHHHHHHccCCCC---------------------
Confidence 3445567899999999999865 23357778854422445789999999999764311
Q ss_pred cCCCcCeeEEeccc---CCeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 013125 87 TLGGIPNIKWYGVD---GEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR 148 (449)
Q Consensus 87 ~~~~i~~~~~~~~~---~~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~ 148 (449)
.+|.+...+.. .+..+||||++ |.++.+. .........++.+++.+|.-||..
T Consensus 71 ---pVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~~~------~~~~~~~~~l~~~l~~~La~LH~~ 127 (297)
T PRK10593 71 ---RMPTVYGVMTHEQSPGPDVLLLERLRGVSVEAP------ARTPERWEQLKDQIVEGLLAWHRI 127 (297)
T ss_pred ---CcCcEEEEeccCCcCCCeEEEEeccCCEecCCC------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 46666655432 35689999999 6555441 123344556677788888888874
No 481
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.98 E-value=0.0042 Score=58.90 Aligned_cols=49 Identities=10% Similarity=0.155 Sum_probs=30.7
Q ss_pred eeeecccCce---eEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcC
Q 013125 12 GRKIGSGSFG---EIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61 (449)
Q Consensus 12 ~~~LG~G~fg---~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~ 61 (449)
.+.++.|+-| .||.+.+ ..|+.+++|.-........+.+|+++++.|..
T Consensus 13 ~~~~~~~~~g~~~~v~~i~~-~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~ 64 (276)
T cd05152 13 PETLSLNESGLDFQVVFAKD-TDGVPWVLRIPRRPDVSERAAAEKRVLALVRK 64 (276)
T ss_pred CCcceecCCcceeEEEEEEc-CCCCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 3444444444 5555432 24677888976543334568999999999975
No 482
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.76 E-value=0.016 Score=57.25 Aligned_cols=74 Identities=20% Similarity=0.273 Sum_probs=49.4
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEe----cCC----CCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhh
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIE----NSG----TKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTII 83 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~----~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (449)
.+.||.|.-..||++.+...++.|+||.- ... -..++...|.++|+.+....
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~-------------------- 93 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELA-------------------- 93 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhC--------------------
Confidence 67899999999999998433567999942 211 22345677888888765321
Q ss_pred hcccCCCcCeeEEecccCCeeEEEEecC
Q 013125 84 FSSTLGGIPNIKWYGVDGEDNVLVLDLL 111 (449)
Q Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 111 (449)
.+.+|.++.|. .+..++|||++
T Consensus 94 ----P~~VP~vy~~D--~e~~~~vMEdL 115 (409)
T PRK12396 94 ----PGLVPKVYLFD--SVMNCCVMEDL 115 (409)
T ss_pred ----CCcCCeEEEEC--cHHhhHHHHhC
Confidence 11466666654 34567888887
No 483
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.65 E-value=0.05 Score=54.04 Aligned_cols=75 Identities=12% Similarity=0.238 Sum_probs=49.6
Q ss_pred EeeeecccCceeEEEEEEcCCCceEEEEEec-----CCC----CchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhh
Q 013125 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIEN-----SGT----KHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALT 81 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~-----~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (449)
..+.||.|....||++.+. +..|+||.-. ... ...+...|+..|+.+....
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~------------------ 95 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLC------------------ 95 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcC------------------
Confidence 4778899999999999873 4568899643 111 3334566677666554221
Q ss_pred hhhcccCCCcCeeEEecccCCeeEEEEecCCC
Q 013125 82 IIFSSTLGGIPNIKWYGVDGEDNVLVLDLLGP 113 (449)
Q Consensus 82 ~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~g~ 113 (449)
...+|.++.++. +..+++||++.+
T Consensus 96 ------p~~VPkVy~~de--d~~vlvME~L~~ 119 (418)
T PLN02756 96 ------PDHVPEVYHFDR--TMALIGMRYLEP 119 (418)
T ss_pred ------CCCCCeEEEECC--CCCEEEEeecCC
Confidence 115777777766 557889999933
No 484
>PLN02236 choline kinase
Probab=96.57 E-value=0.048 Score=53.46 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=36.3
Q ss_pred eEEeeeecccCceeEEEEEEcC----CCceEEEEEecCCCC-chhHHHHHHHHHHHcCCC
Q 013125 9 YKLGRKIGSGSFGEIFLASHVD----TNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGS 63 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~----~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~ 63 (449)
..-+..|-.|-.-.+|++.... +++.|++|+...... .-....|..+++.+....
T Consensus 38 ~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~g 97 (344)
T PLN02236 38 ALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHG 97 (344)
T ss_pred cEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcC
Confidence 3344566558888999987532 346899998765432 112367899998887654
No 485
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.53 E-value=0.0099 Score=57.25 Aligned_cols=74 Identities=20% Similarity=0.266 Sum_probs=59.4
Q ss_pred ccCCeeEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCcEEeecCCCCCeEEEEeec
Q 013125 99 VDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFG 177 (449)
Q Consensus 99 ~~~~~~~lv~e~~g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~LH~~-giiHrDLkp~Nill~~~~~~~~vkL~DfG 177 (449)
.++.+.|++|++.|+++.-. .....+++..++++.+.-+.-+..+ .+-||||.-+|||| +.|.|.|+||-
T Consensus 296 de~~y~yl~~kdhgt~is~i-----k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI----d~GnvtLIDfk 366 (488)
T COG5072 296 DETLYLYLHFKDHGTPISII-----KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI----DEGNVTLIDFK 366 (488)
T ss_pred CCceEEEEEEecCCceeeee-----ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee----ecCceEEEEee
Confidence 45567788999988887532 2245788889999988877777664 68899999999999 58999999999
Q ss_pred ceee
Q 013125 178 LAKK 181 (449)
Q Consensus 178 la~~ 181 (449)
+|+.
T Consensus 367 lsRl 370 (488)
T COG5072 367 LSRL 370 (488)
T ss_pred eeec
Confidence 9984
No 486
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.45 E-value=0.039 Score=53.80 Aligned_cols=52 Identities=17% Similarity=0.129 Sum_probs=33.7
Q ss_pred eeeecccCceeEEEEEEcCC---CceEEEEEecCCCCc-hhHHHHHHHHHHHcCCC
Q 013125 12 GRKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTKH-PQLLYEAKVYKILQGGS 63 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~---~~~vAvKv~~~~~~~-~~~~~E~~~l~~l~~~~ 63 (449)
++.|..|---.+|++..... +..|++|+....... -...+|..+++.+....
T Consensus 19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~g 74 (330)
T PLN02421 19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAG 74 (330)
T ss_pred EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcC
Confidence 44454477778998875432 337999987654321 12467889999887655
No 487
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.41 E-value=0.038 Score=52.56 Aligned_cols=76 Identities=20% Similarity=0.280 Sum_probs=51.5
Q ss_pred eEEeeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccC
Q 013125 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTL 88 (449)
Q Consensus 9 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (449)
.+-.+.|+-|....+|+.. .+++.+.||+-. ......+..|++-|+.|.....+
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~-~~~~~~f~~Ea~gL~~L~~~~~~----------------------- 72 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNS-ESGRDMFEGEAEGLKALAEANPI----------------------- 72 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEE-GGGCCHHHHHHHHHHHHCHTTTS-----------------------
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecC-hhhHHHHHHHHHHHHHHHhcCCC-----------------------
Confidence 4556788999999999987 467788899866 33445689999999999543321
Q ss_pred CCcCeeEEecccCCeeEEEEecC
Q 013125 89 GGIPNIKWYGVDGEDNVLVLDLL 111 (449)
Q Consensus 89 ~~i~~~~~~~~~~~~~~lv~e~~ 111 (449)
.+|.+..++...+..+||||++
T Consensus 73 -~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 73 -RVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp -BS--EEEEEE-SSCCEEEEE--
T ss_pred -CCCeEEEEEeecCCceEEEEee
Confidence 5888888888878889999998
No 488
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.24 E-value=0.00049 Score=76.41 Aligned_cols=131 Identities=11% Similarity=0.003 Sum_probs=96.9
Q ss_pred cCCeeEEEEecC-CCCHHHHHHHhcCCCC--HHHHHHHHHHH-HHHHHHHHhC-C----ccccCCCCCcEEeecCCCCCe
Q 013125 100 DGEDNVLVLDLL-GPSLEDLFVYCRRKFS--LKTVLMLADQM-IARIEYVHSR-G----FLHRDIKPDNFLMGLGRKANQ 170 (449)
Q Consensus 100 ~~~~~~lv~e~~-g~sL~~~~~~~~~~~~--~~~~~~i~~qi-l~~L~~LH~~-g----iiHrDLkp~Nill~~~~~~~~ 170 (449)
.....+.+++++ +|.+.+.+.+....++ ....+...+|+ +.+..-+|+. + .+|++||+-|.+| ..+..
T Consensus 1302 ~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmI---Vtny~ 1378 (2724)
T KOG1826|consen 1302 ESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMI---VTNYN 1378 (2724)
T ss_pred CChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccce---ecCCc
Confidence 345568889998 8888888876433322 22333444444 7777777764 2 6899999999999 47788
Q ss_pred EEEEeecceeeecCCCCCccccccCCCCCCCCccccccccccCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 013125 171 VYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 240 (449)
Q Consensus 171 vkL~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~~DvwSlG~il~el~~G~~pf~ 240 (449)
+|+.++|+.+....... ..+...+++.|+.+++.....++.++|+|..|+.+|+...|..+|-
T Consensus 1379 v~~gk~gLdKIknp~~s-------f~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1379 VKLGKGGLDKIKNPVLS-------FFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYFI 1441 (2724)
T ss_pred ccccccccccccCchHh-------hhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHH
Confidence 99999999983222211 1246678888999999999999999999999999999998877764
No 489
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.10 E-value=0.026 Score=56.82 Aligned_cols=79 Identities=19% Similarity=0.121 Sum_probs=50.9
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCChhhcHHHHHHHHHHhhcC---CCHH-HhhccChHHHHHHHHHHhCCCCCCCCCHH
Q 013125 218 RRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS---TPIE-VLCKSHPAEFASYFHYCQSLTFDQRPDYG 293 (449)
Q Consensus 218 ~~~DvwSlG~il~el~~G~~pf~~~~~~~~~~~~~~i~~~~~~---~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~ 293 (449)
+++||||+|.++.|+.-|...|...........+.+....... ...+ .....++..+.++...|+-..|..||.+.
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~ 189 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM 189 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence 3899999999999999998888765544333333322110000 0000 11233467888999999999999999665
Q ss_pred HHH
Q 013125 294 FLK 296 (449)
Q Consensus 294 ~l~ 296 (449)
++.
T Consensus 190 ~~~ 192 (725)
T KOG1093|consen 190 ELS 192 (725)
T ss_pred HHh
Confidence 543
No 490
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=95.67 E-value=0.14 Score=49.18 Aligned_cols=29 Identities=24% Similarity=0.555 Sum_probs=24.8
Q ss_pred ccccCCCCCcEEeecCCCCCeEEEEeecceee
Q 013125 150 FLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 181 (449)
Q Consensus 150 iiHrDLkp~Nill~~~~~~~~vkL~DfGla~~ 181 (449)
++|+|+++.|+++. ..+.+-|+||+++..
T Consensus 200 lvHGD~~~gNlii~---~~~~~gVlDwe~~~l 228 (321)
T COG3173 200 LVHGDYRPGNLIID---PGRPTGVLDWELATL 228 (321)
T ss_pred eeeCCcccCCEEEe---CCCeeEEEecccccc
Confidence 89999999999995 455588999998864
No 491
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.32 E-value=0.041 Score=53.93 Aligned_cols=60 Identities=23% Similarity=0.249 Sum_probs=41.0
Q ss_pred CeeEEEEecC-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCccccCCCCCcEEee
Q 013125 102 EDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYV-HSRGFLHRDIKPDNFLMG 163 (449)
Q Consensus 102 ~~~~lv~e~~-g~sL~~~~~~~~~~~~~~~~~~i~~qil~~L~~L-H~~giiHrDLkp~Nill~ 163 (449)
...+|+-+|. |.++..+++.. ..+++...+++.-...||-.| --.+++|.|++|.||++.
T Consensus 318 ~~~vl~E~~~~Gl~v~~~v~~~--~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlir 379 (565)
T KOG1236|consen 318 TDLVLVETYERGLSVLRFVKWK--SQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIR 379 (565)
T ss_pred ccceeeeeccccccHHhhhhcc--cChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEE
Confidence 3456777777 88888887643 234445556665555554443 346899999999999994
No 492
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.30 E-value=0.37 Score=46.88 Aligned_cols=43 Identities=14% Similarity=0.100 Sum_probs=29.6
Q ss_pred CceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCC
Q 013125 19 SFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGG 62 (449)
Q Consensus 19 ~fg~Vy~a~~~~~~~~vAvKv~~~~~-~~~~~~~E~~~l~~l~~~ 62 (449)
.-..||.+.. .++..+++|+..... ....+..|.+++..|...
T Consensus 37 ~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~ 80 (325)
T PRK11768 37 YENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEA 80 (325)
T ss_pred ccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC
Confidence 3446888875 345679999876432 345677899999888654
No 493
>PTZ00384 choline kinase; Provisional
Probab=94.83 E-value=0.79 Score=45.58 Aligned_cols=28 Identities=36% Similarity=0.475 Sum_probs=23.1
Q ss_pred CCccccCCCCCcEEeecCCCCCeEEEEeecce
Q 013125 148 RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179 (449)
Q Consensus 148 ~giiHrDLkp~Nill~~~~~~~~vkL~DfGla 179 (449)
..+.|.||-+.|||. .+..++++||-.|
T Consensus 227 ~VfCHNDL~~gNIL~----~~~~l~lID~EYA 254 (383)
T PTZ00384 227 VLFCHNDLFFTNILD----FNQGIYFIDFDFA 254 (383)
T ss_pred eeeeeccCCcccEEe----cCCCEEEEEeccc
Confidence 457899999999998 4567999999554
No 494
>PRK06148 hypothetical protein; Provisional
Probab=94.46 E-value=1 Score=50.76 Aligned_cols=47 Identities=15% Similarity=0.140 Sum_probs=33.0
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcC
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~ 61 (449)
+.|+ |..-.+|++.. .+++.+++|+.+..........|.+++..|..
T Consensus 31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~ 77 (1013)
T PRK06148 31 TPLD-GERDLNFRLTT-DDGADYILKIVNPSEPRVESDFQTAALDHLAA 77 (1013)
T ss_pred eecC-CcCCceEEEEe-CCCCeEEEEEcCCccchhHHHHHHHHHHHHHh
Confidence 4564 45678898875 35667999998876555556677778887764
No 495
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=93.63 E-value=0.13 Score=49.46 Aligned_cols=28 Identities=46% Similarity=0.860 Sum_probs=23.8
Q ss_pred CCccccCCCCCcEEeecCCCCCeEEEEeecce
Q 013125 148 RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 179 (449)
Q Consensus 148 ~giiHrDLkp~Nill~~~~~~~~vkL~DfGla 179 (449)
.+++|+|+++.||++. . +.+.|+||+.+
T Consensus 187 ~~liHgD~~~~Nil~~---~-~~i~lIDfd~~ 214 (313)
T TIGR02906 187 RGFCHQDYAYHNILLK---D-NEVYVIDFDYC 214 (313)
T ss_pred CceEcCCCCcccEEEe---C-CcEEEEECccc
Confidence 5789999999999994 3 67899999755
No 496
>PRK06149 hypothetical protein; Provisional
Probab=93.57 E-value=0.91 Score=50.99 Aligned_cols=47 Identities=15% Similarity=0.122 Sum_probs=31.9
Q ss_pred eeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCC
Q 013125 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62 (449)
Q Consensus 13 ~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~ 62 (449)
..|+.+. -.+|+++.. +..+++|+.+.......+..|..++..|...
T Consensus 37 ~~L~s~~-d~nf~v~t~--~~~yVLKi~~~~~~~~~l~~e~~~l~hL~~~ 83 (972)
T PRK06149 37 TELGSQQ-DRNFRVDSD--GGRFVLKICHAAYAAVELEAQHAALRHLAER 83 (972)
T ss_pred EecCCcC-cceEEEEec--CCcEEEEeCCccCChHHHHHHHHHHHHHHhh
Confidence 4555333 368888753 3468889988655556778888888888654
No 497
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.42 E-value=0.75 Score=41.91 Aligned_cols=73 Identities=19% Similarity=0.304 Sum_probs=49.9
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCc
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGI 91 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 91 (449)
.+++.-|..-+.|...+ ....|-+|+-. ......+.-|+.=|+.|...+-+ .+
T Consensus 21 r~~v~gG~inea~~v~d--g~~~~FvK~n~-~~~~~~f~AEa~gL~~la~s~ti------------------------~V 73 (286)
T COG3001 21 REEVSGGDINEAWRLRD--GTDPFFVKCNQ-REQLSMFTAEADGLELLARSNTI------------------------TV 73 (286)
T ss_pred ccccCCccccceeEeec--CCcceEEEecc-hhhHHHHHHHHHHHHHHHhcCCc------------------------cc
Confidence 34455555555665554 34567788622 12233477788888888766522 68
Q ss_pred CeeEEecccCCeeEEEEecC
Q 013125 92 PNIKWYGVDGEDNVLVLDLL 111 (449)
Q Consensus 92 ~~~~~~~~~~~~~~lv~e~~ 111 (449)
|++...|....+.|+||||+
T Consensus 74 P~vi~~G~~~~~sylVle~L 93 (286)
T COG3001 74 PKVIAVGASRDHSYLVLEYL 93 (286)
T ss_pred cceEEecCCCCeeEEEEeec
Confidence 88999999999999999999
No 498
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=93.37 E-value=0.47 Score=44.20 Aligned_cols=52 Identities=15% Similarity=0.158 Sum_probs=34.8
Q ss_pred eeeecccCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHH---HHHHHHcCCCccee
Q 013125 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEA---KVYKILQGGSKIRL 67 (449)
Q Consensus 12 ~~~LG~G~fg~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~---~~l~~l~~~~~~~~ 67 (449)
...+..|..+.|+.|+. .+|..+++|+...... ...|. ..|+..++...+++
T Consensus 7 ~~~~~~g~~s~V~pv~~-~dG~~avLKl~~p~~~---~~~E~~g~~~L~~w~G~GaVrl 61 (253)
T PF04655_consen 7 DGPPAHGSSSLVVPVRR-ADGTPAVLKLAPPHAE---AEHEARGEAALRWWNGRGAVRL 61 (253)
T ss_pred CCCCCCCcceEEEEEEc-CCCCeEEEEecCCccc---chhhhhHHhHhheeCCCCceee
Confidence 34566799999999984 5688999998764332 23333 55777766654444
No 499
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=93.00 E-value=1.6 Score=39.64 Aligned_cols=76 Identities=24% Similarity=0.309 Sum_probs=50.5
Q ss_pred eecccCce-eEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCcceeeEeecchhhhhhhhhhhcccCCCcC
Q 013125 14 KIGSGSFG-EIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSKIRLVVFHVDHVIIHALTIIFSSTLGGIP 92 (449)
Q Consensus 14 ~LG~G~fg-~Vy~a~~~~~~~~vAvKv~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 92 (449)
.+..|..| +||+..- ..+--+-+|+... .....+..|+..++.+..... .+|
T Consensus 25 ~v~~geS~~~v~rl~a-~~r~g~~~k~~~~-~~~a~L~~Ea~RlrWla~~~l-------------------------~~P 77 (266)
T COG3231 25 RVTEGESGAGVFRLFA-DSRPGLYLKIASS-GPAAELEGEAARLRWLAGQGL-------------------------GCP 77 (266)
T ss_pred eeeccCCCCeEEEEec-cCCCceEEEEecC-cchhhhhhHHHHHHHhcccCC-------------------------CCC
Confidence 44555444 6776543 2233345565443 345678999999999986531 677
Q ss_pred eeEEecccCCeeEEEEecC-CCCHH
Q 013125 93 NIKWYGVDGEDNVLVLDLL-GPSLE 116 (449)
Q Consensus 93 ~~~~~~~~~~~~~lv~e~~-g~sL~ 116 (449)
.+.....+.+..||+|+-+ |.++.
T Consensus 78 ~V~~~~~~~~~~wLl~salpG~~~s 102 (266)
T COG3231 78 RVLGLEDDADQAWLLMSALPGEDAS 102 (266)
T ss_pred ceEeeccCcchhHHhhhhcCCCccc
Confidence 7888888888999999988 65554
No 500
>PTZ00296 choline kinase; Provisional
Probab=92.91 E-value=2.1 Score=43.45 Aligned_cols=53 Identities=21% Similarity=0.155 Sum_probs=36.1
Q ss_pred EeeeecccCceeEEEEEEcC--------CCceEEEEEecCCCC-chhHHHHHHHHHHHcCCC
Q 013125 11 LGRKIGSGSFGEIFLASHVD--------TNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGS 63 (449)
Q Consensus 11 i~~~LG~G~fg~Vy~a~~~~--------~~~~vAvKv~~~~~~-~~~~~~E~~~l~~l~~~~ 63 (449)
-++.|..|---.+|++.... +++.|.+++...... .-....|..+++.+....
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~g 170 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYR 170 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCC
Confidence 56667677777899987542 146799998765432 113467888888887655
Done!