Query 013127
Match_columns 449
No_of_seqs 67 out of 69
Neff 3.8
Searched_HMMs 46136
Date Fri Mar 29 00:41:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013127.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013127hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12056 DUF3537: Protein of u 100.0 8E-166 2E-170 1245.4 42.2 387 46-432 3-398 (398)
2 PF08395 7tm_7: 7tm Chemosenso 97.4 0.066 1.4E-06 49.2 21.5 147 242-440 217-365 (372)
3 PF02949 7tm_6: 7tm Odorant re 90.1 10 0.00022 35.6 13.7 127 200-329 126-260 (313)
4 KOG4101 Cysteine-rich hydropho 37.0 15 0.00032 34.9 0.7 10 410-419 44-53 (175)
5 PF02076 STE3: Pheromone A rec 30.9 5.7E+02 0.012 26.0 10.9 72 104-186 61-134 (283)
6 PF07856 Orai-1: Mediator of C 26.9 5.7E+02 0.012 24.5 9.6 54 156-209 106-161 (175)
7 PF06734 UL97: UL97; InterPro 24.9 1.6E+02 0.0035 28.8 5.4 36 109-157 90-125 (184)
8 PRK06569 F0F1 ATP synthase sub 21.8 87 0.0019 29.6 3.0 61 103-163 3-78 (155)
9 PF05568 ASFV_J13L: African sw 21.0 63 0.0014 30.9 1.9 39 60-98 17-57 (189)
10 KOG1962 B-cell receptor-associ 19.9 7E+02 0.015 25.0 8.9 89 131-229 26-128 (216)
No 1
>PF12056 DUF3537: Protein of unknown function (DUF3537); InterPro: IPR021924 This family of transmembrane proteins are functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 427 to 453 amino acids in length.
Probab=100.00 E-value=7.7e-166 Score=1245.40 Aligned_cols=387 Identities=47% Similarity=0.755 Sum_probs=354.8
Q ss_pred hHHHHhHHHHhhhheecCCCchhhHHHHHHHHHHHHHHhhhhhhhcCCCCCCccCCccchhHHHHHhhHHHHHHHHHhhh
Q 013127 46 DRTLQKLEYFLTFLGFNHSSVLSFVLSWTAFVVTGVLVPVVILELSNCPGCEKGQIKDFELCIVASQACLAAISLICMSH 125 (449)
Q Consensus 46 ~deLr~fr~~L~w~~ldqSs~~~~~~Sw~~F~~l~v~vP~~~~~~~~c~~cd~~~~~~f~~~Vq~s~s~lAavsf~cLS~ 125 (449)
+||||+||++|+|||+||||++++++||++|+++|++||++++++++|++||++|++|||++||+|||++|+|||+||||
T Consensus 3 ~deL~~fr~~L~w~~~dqSs~~~~~~Sw~~F~ll~v~vP~~~~~~~~c~~cd~~~~~~f~~~Vq~s~s~lAavsf~cLS~ 82 (398)
T PF12056_consen 3 RDELRSFRSFLRWCGLDQSSPLSAALSWSVFLLLAVAVPAASHFLLSCPSCDKYHIRPFEKLVQLSQSALAAVSFLCLSH 82 (398)
T ss_pred hhHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhcCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccceeeeccccCchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhheeeeeecccchh------HHHHHHHH
Q 013127 126 NLRKYGIRKFLFVDRHSGHMERFHYQYIQQIKDSLRLLILWSLPCFILKTAREIIRILYVHHESWW------QSAAILFA 199 (449)
Q Consensus 126 ~~rkyGLRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~a~ki~w~~~~~~~~p~------~s~~~l~~ 199 (449)
|+||||+|||||+||++|||++||+||++||++|||+|++|+||||++|+|||||||+++..++|+ |..+.+++
T Consensus 83 ~~rkyGlRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~~~ki~~~~~~~~~~P~~~~~~~~~sva~~l 162 (398)
T PF12056_consen 83 FLRKYGLRRFLFLDKLRDDSEEVRRGYTRQLNRSFRLLACWVLPCFLVEAAYKIWWYSSVAVQIPYIGHPSWWNSVACLL 162 (398)
T ss_pred HhHhcCceeeeeecccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEeeccccCCccCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999977665555 22333688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcHHHHHhhccCHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 013127 200 LILSWTYLSTISLSASILFHVVCNLQVMHFDDYAKLLAMESDVVVLIEEHMRLRYHLSKISHRFRIYLLLEFLVVTASQI 279 (449)
Q Consensus 200 ~l~SW~YrT~ifll~CVLFrLiC~LQiLR~~~~~klfe~~sdv~~il~EH~RIR~qL~~ISHRfR~Fil~~ll~VTaSQf 279 (449)
+++||+|||+|||++||||||+|||||||||||+|+||+++||++||+||+|||+||+|||||||+|||+||++||||||
T Consensus 163 ~l~SW~YrT~ifl~~CvLFrLiC~LQiLr~~~~~klfe~~sdv~~il~EH~RiR~qL~~ISHRfR~Fil~~l~~VTaSQf 242 (398)
T PF12056_consen 163 ELASWLYRTTIFLLVCVLFRLICNLQILRFEGYAKLFERDSDVGVILEEHLRIRRQLSKISHRFRIFILLSLLLVTASQF 242 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhheehHhHHHHHccCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCcceeeeecCceeehhHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhccCCCCCcccccCCCCCcc
Q 013127 280 VSLFQTTGYGGKITFINGGDFAASSVVQVVGIILCLHAATKISHRAQNIASIASRWHALATCSSGDSSQLRVSNSFGNLE 359 (449)
Q Consensus 280 ~sLl~~t~~~~~inf~~~GdLavcS~vqv~Gl~icL~~AaKITHrAQ~I~siAskWHa~aT~~s~d~~~~~~~~~~~~~~ 359 (449)
++||+||++++++||+|+|||||||+|||+|++||||||||||||||+|||+||||||++||+|+|+.+.++++..+..+
T Consensus 243 ~sLl~~t~~~~~inf~~~GdlavcS~vqv~Gl~iCL~~AaKITHrAQ~I~siAskWHa~aTc~s~d~~~~~~p~~~~~~~ 322 (398)
T PF12056_consen 243 VSLLQTTRSKGDINFFNAGDLAVCSVVQVSGLFICLHGAAKITHRAQAITSIASKWHACATCSSFDSDQGETPTSDSLSA 322 (398)
T ss_pred HHHHHHhccccceeEeeccceeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheecccccccccCCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999866544433332222
Q ss_pred CCCCCCCcCCCCCCCcccccc-cccCCCcccchhh--hhhhHhHHHHHHHhhcCCCceEEEEEeehhhhHHHHHHH
Q 013127 360 ASSPLNSVHMNYSESDLVSLD-YVAMPTNTQLASY--MCSYHRRQAYVMYLQANPGGITIFGWTVDRALINTIFFI 432 (449)
Q Consensus 360 ~~~~~~~~~~d~~~~d~ds~d-~~~~~~~~~~~~~--~~SfqkRQAlVtYLq~N~~GITvfGf~lDR~~L~TIF~~ 432 (449)
+.++......++++||+|+.| +.+.+++++.|+| |+||||||||||||||||||||||||+|||||||||||+
T Consensus 323 ~~~~~~~~~~~~~~sd~es~d~~~~~~~~~~~~~~~~~~SfqKRQALVtYLq~N~aGITvfGf~lDR~~LhTIF~i 398 (398)
T PF12056_consen 323 AANPFPSAGINSSSSDDESGDEEDDLDNTKQLPSYADMISFQKRQALVTYLQNNRAGITVFGFVLDRGLLHTIFMI 398 (398)
T ss_pred ccccccCCCCCCCccchhhcccCCCCCccccccccchhHHHHHHHHHHHHHhcCCCCeEEEEEEeehHHHHHHhhC
Confidence 222223333344444444443 5556699999999 999999999999999999999999999999999999985
No 2
>PF08395 7tm_7: 7tm Chemosensory receptor; InterPro: IPR013604 This family includes a number of gustatory and odorant receptors mainly from insect species such as Anopheles gambiae (African malaria mosquito) and Drosophila melanogaster (Fruit fly). They are classified as G-protein-coupled receptors (GPCRs), or seven-transmembrane receptors. They show high sequence divergence, consistent with an ancient origin for the family [, ]. ; GO: 0050909 sensory perception of taste, 0016021 integral to membrane
Probab=97.41 E-value=0.066 Score=49.20 Aligned_cols=147 Identities=18% Similarity=0.160 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhccCc-ceeeeecCceeehhHHHHHHHHHHHhhhhh
Q 013127 242 VVVLIEEHMRLRYHLSKISHRFRIYLLLEFLVVTASQIVSLFQTTGYGG-KITFINGGDFAASSVVQVVGIILCLHAATK 320 (449)
Q Consensus 242 v~~il~EH~RIR~qL~~ISHRfR~Fil~~ll~VTaSQf~sLl~~t~~~~-~inf~~~GdLavcS~vqv~Gl~icL~~AaK 320 (449)
...+.+-|.+|.+--..+..=|...+++.+...-..-...++....... ..+......-.+.....+..+++-...+.+
T Consensus 217 l~~l~~~~~~L~~~~~~in~~fg~~ll~~~~~~f~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 296 (372)
T PF08395_consen 217 LRKLRRLHDELCDLVESINRIFGLQLLLILLSSFIFIVFNLYYIYYNISQNSSLFMLLINILWLFIYIIFLVLLIYVCDR 296 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeehhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666777777777777777766665554444443344442111111 112222223344555666677777788888
Q ss_pred hhhhhhhHHHHHhhhhhhhhccCCCCCcccccCCCCCccCCCCCCCcCCCCCCCcccccccccCCCcccchhhhhhhHhH
Q 013127 321 ISHRAQNIASIASRWHALATCSSGDSSQLRVSNSFGNLEASSPLNSVHMNYSESDLVSLDYVAMPTNTQLASYMCSYHRR 400 (449)
Q Consensus 321 ITHrAQ~I~siAskWHa~aT~~s~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~d~ds~d~~~~~~~~~~~~~~~SfqkR 400 (449)
++..++++..+. |-. .. + . . + ..-.++-
T Consensus 297 ~~~e~~~~~~~l---~~~---~~---~---~---------~-------------------------~------~~~~~~l 324 (372)
T PF08395_consen 297 ISQEANKTGSIL---HKL---NN---F---R---------N-------------------------D------SELQREL 324 (372)
T ss_pred HhhhHhHHHHHH---HHc---Cc---c---c---------c-------------------------h------hHHhhHH
Confidence 888888888777 222 10 0 0 0 0 0112235
Q ss_pred HHHHHHhhcCCCceEEEEE-eehhhhHHHHHHHHHHHHHHh
Q 013127 401 QAYVMYLQANPGGITIFGW-TVDRALINTIFFIELSLVTFV 440 (449)
Q Consensus 401 QAlVtYLq~N~~GITvfGf-~lDR~~L~TIF~~E~SLVLwi 440 (449)
+.+...++|+|-.+|..|| .+|++++.++++.-.|-+.-+
T Consensus 325 ~~f~~ql~~~~~~~ta~g~f~ld~~ll~~~~~~i~TYliIL 365 (372)
T PF08395_consen 325 ELFSLQLQHQPLKFTACGFFDLDRSLLFSIIGAITTYLIIL 365 (372)
T ss_pred HHHHHHHHhcCCceEEeeEEEECHHHHHHHHHHHHHHHHhh
Confidence 6778899999999999998 599999999999877766544
No 3
>PF02949 7tm_6: 7tm Odorant receptor; InterPro: IPR004117 All known members of this group are seven-transmembrane proteins that are candidate odorant receptors in Drosophila.; GO: 0004984 olfactory receptor activity, 0005549 odorant binding, 0007608 sensory perception of smell, 0016020 membrane
Probab=90.11 E-value=10 Score=35.57 Aligned_cols=127 Identities=17% Similarity=0.270 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhh--hcHHHHHhh-----ccCHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 013127 200 LILSWTYLSTISLSASILFHVVCNLQVMHF--DDYAKLLAM-----ESDVVVLIEEHMRLRYHLSKISHRFRIYLLLEFL 272 (449)
Q Consensus 200 ~l~SW~YrT~ifll~CVLFrLiC~LQiLR~--~~~~klfe~-----~sdv~~il~EH~RIR~qL~~ISHRfR~Fil~~ll 272 (449)
..+.+.+-..=.+..+.+.++..++++|+- ++..+.=++ +.....+++.|.++-+..+++..-|+..++..++
T Consensus 126 ~~~~~~~~~~d~l~~~~~~~~~~q~~iL~~~l~~l~~~~~~~~~~~~~~L~~~I~~H~~ll~~~~~l~~~~~~~~l~~~~ 205 (313)
T PF02949_consen 126 FICVFIIIGFDSLFIILLLHICGQFDILQRRLENLFEDNSEEDEERREELKECIKRHQRLLRFVEKLEDIFSPIFLVQFL 205 (313)
T ss_pred cchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHhhhcchhhhhhhhhhccchhhhhhhh
Confidence 344555555555666677788888888763 333322111 2457889999999999999999999999988887
Q ss_pred HHHHHHHHHHHHHhccCc-ceeeeecCceeehhHHHHHHHHHHHhhhhhhhhhhhhHH
Q 013127 273 VVTASQIVSLFQTTGYGG-KITFINGGDFAASSVVQVVGIILCLHAATKISHRAQNIA 329 (449)
Q Consensus 273 ~VTaSQf~sLl~~t~~~~-~inf~~~GdLavcS~vqv~Gl~icL~~AaKITHrAQ~I~ 329 (449)
..+..=-..+++.+.... ..+++.-+=+.++++.|+ ++.|. .+.+++....++.
T Consensus 206 ~~~~~ic~~~f~i~~~~~~~~~~~~~~~~~~~~~~~l--f~~c~-~g~~l~~~s~~i~ 260 (313)
T PF02949_consen 206 SSSLVICFLLFQISTSSSSSFNIFFYFMYLVAMLLQL--FIYCY-LGQELIDESEEIA 260 (313)
T ss_pred hhHHHHhhcccccccccccccccchhhhHHHHHHHHH--HHHHh-hHHHHHHHHhhhh
Confidence 776665566666665444 556666655566666666 45565 3456666655553
No 4
>KOG4101 consensus Cysteine-rich hydrophobic proteins [General function prediction only]
Probab=37.04 E-value=15 Score=34.88 Aligned_cols=10 Identities=50% Similarity=1.006 Sum_probs=8.2
Q ss_pred CCCceEEEEE
Q 013127 410 NPGGITIFGW 419 (449)
Q Consensus 410 N~~GITvfGf 419 (449)
-.|.|||||-
T Consensus 44 G~GniTVFGl 53 (175)
T KOG4101|consen 44 GAGNITVFGL 53 (175)
T ss_pred ccCceEEEec
Confidence 4688999995
No 5
>PF02076 STE3: Pheromone A receptor; InterPro: IPR001499 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes). They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). Little is known about the structure and function of the mating factor receptors, STE2 and STE3. It is believed, however, that they are integral membrane proteins that may be involved in the response to mating factors on the cell membrane [, , ]. The amino acid sequences of both receptors contain high proportions of hydrophobic residues grouped into 7 domains, in a manner reminiscent of the rhodopsins and other receptors believed to interact with G-proteins. However, while a similar 3D framework has been proposed to account for this, there is no significant sequence similarity either between STE2 and STE3, or between these and the rhodopsin-type family: the receptors thus bear their own unique '7TM' signatures. The STE3 gene of Saccharomyces cerevisiae (Baker's yeast) is the cell-surface receptor that binds the 13-residue lipopeptide a-factor. Several related fungal pheromone receptor sequences are known: these include pheromone B alpha 1 and B alpha 3, and pheromone B beta 1 receptors from Schizophyllum commune; pheromone receptor 1 from Ustilago hordei; and pheromone receptors 1 and 2 from Ustilago maydis. Members of the family share about 20% sequence identity.; GO: 0004932 mating-type factor pheromone receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane
Probab=30.91 E-value=5.7e+02 Score=26.02 Aligned_cols=72 Identities=13% Similarity=0.213 Sum_probs=46.3
Q ss_pred chhHHHHHhhHHHHHHHHHhhhhhhhhccceeeeccccCchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhh--ee
Q 013127 104 FELCIVASQACLAAISLICMSHNLRKYGIRKFLFVDRHSGHMERFHYQYIQQIKDSLRLLILWSLPCFILKTAREI--IR 181 (449)
Q Consensus 104 f~~~Vq~s~s~lAavsf~cLS~~~rkyGLRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~a~ki--~w 181 (449)
...-+++..+..-..|.+|+.+.+.+-.--|---+. .+++ ||. ..+-++.|+.+|.+.+-+.|=+ -+
T Consensus 61 I~~kl~~~~~~g~~~a~lcI~r~L~~I~s~r~~~~~----~~~~-rr~------~~~d~~i~~g~Pil~m~l~yivQ~~R 129 (283)
T PF02076_consen 61 ISTKLIIGSSVGIPAASLCIMRRLYRIASARAVSLS----RSEK-RRR------IIIDLLICFGIPILQMALHYIVQGHR 129 (283)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC----hHHH-HHH------HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 345666666667777889999988865433322111 2222 333 6677899999999988876654 46
Q ss_pred eeeec
Q 013127 182 ILYVH 186 (449)
Q Consensus 182 ~~~~~ 186 (449)
|.=.+
T Consensus 130 f~I~e 134 (283)
T PF02076_consen 130 FDIVE 134 (283)
T ss_pred eeEec
Confidence 66554
No 6
>PF07856 Orai-1: Mediator of CRAC channel activity; InterPro: IPR012446 This entry includes Drosophila Orai and human Orai1, Orai2 and Orai3. ORAI-1 GFP reporters are co-expressed with STIM-1 (ER CA(2+) sensors) in the gonad and intestine. The protein has four predicted transmembrane domains with a highly conserved region between TM2 ad TM3. This conserved domain is thought to function in channel regulation. ORAI1-related proteins are required for the production of the calcium channel, CRAC, along with STIM1-related proteins [].
Probab=26.88 E-value=5.7e+02 Score=24.52 Aligned_cols=54 Identities=15% Similarity=0.071 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhe--eeeeecccchhHHHHHHHHHHHHHHHHHH
Q 013127 156 IKDSLRLLILWSLPCFILKTAREII--RILYVHHESWWQSAAILFALILSWTYLST 209 (449)
Q Consensus 156 l~~sfrlLa~~vLPcf~~e~a~ki~--w~~~~~~~~p~~s~~~l~~~l~SW~YrT~ 209 (449)
++.+++.-..+-+|.|++|++--.| +|.+......+...++++..++-|+.++.
T Consensus 106 cE~~W~~s~~lGi~lFL~~l~l~~WIKF~~~~~~~aa~~~t~i~~~~~li~~~~~~ 161 (175)
T PF07856_consen 106 CELAWRFSTVLGIPLFLAELALLGWIKFWDSPSPAAAIAITAILVPVLLIFVVFIQ 161 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeehhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555599999999998766 33322223345555555666666664443
No 7
>PF06734 UL97: UL97; InterPro: IPR010615 The gene product form the gene UL97 is a serine/threonine kinase. Although it can phosphorylates the antiviral drug ganciclovir [], its biological function is the phosphorylation of its natural viral and cellular protein substrates which affect viral replication at many levels. The kinase phosphorylates eukaryotic elongation factor 1delta, the carboxyl terminal domain of the large subunit of RNA polymerase II, the retinoblastoma tumour suppressor and lamins A and C performing a similar function to the cdc2/cyclin-dependent kinase 1. The activity of UL97 appear to stimulate the cell cycle to support viral DNA synthesis, enhance the expression of viral genes, promote virion morphogenesis and facilitate the egress of mature capsids from the nucleus []. ; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0016032 viral reproduction
Probab=24.86 E-value=1.6e+02 Score=28.80 Aligned_cols=36 Identities=25% Similarity=0.442 Sum_probs=30.2
Q ss_pred HHHhhHHHHHHHHHhhhhhhhhccceeeeccccCchhHHHHHHHHHHHH
Q 013127 109 VASQACLAAISLICMSHNLRKYGIRKFLFVDRHSGHMERFHYQYIQQIK 157 (449)
Q Consensus 109 q~s~s~lAavsf~cLS~~~rkyGLRr~LflD~l~~~s~~vr~gY~~~l~ 157 (449)
.+-+.+++-|..+||-+.+-|.|++ +||++|+..|=
T Consensus 90 ~~dLcALg~V~~fCl~R~LD~RG~~-------------~Vr~~~E~~LF 125 (184)
T PF06734_consen 90 VADLCALGNVVLFCLVRLLDRRGLR-------------EVRKYYENLLF 125 (184)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccH-------------HHHhhHHHHHH
Confidence 4567889999999999999988875 69999998763
No 8
>PRK06569 F0F1 ATP synthase subunit B'; Validated
Probab=21.76 E-value=87 Score=29.61 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=45.5
Q ss_pred cchhHHHHHhhHHHHHHHHHhhhhhhhhccceeeec---------------cccCchhHHHHHHHHHHHHHHHHHH
Q 013127 103 DFELCIVASQACLAAISLICMSHNLRKYGIRKFLFV---------------DRHSGHMERFHYQYIQQIKDSLRLL 163 (449)
Q Consensus 103 ~f~~~Vq~s~s~lAavsf~cLS~~~rkyGLRr~Lfl---------------D~l~~~s~~vr~gY~~~l~~sfrlL 163 (449)
|||...-.++-..-+|+|+-|.-+++|+...++.=+ ++.+.+.+..+..|.++|+++=.-.
T Consensus 3 Qfd~~~~~sqifw~iI~FlILy~ll~kf~~ppI~~iLe~R~~~I~~~L~~Ae~~k~eAe~l~a~ye~~L~~Ar~eA 78 (155)
T PRK06569 3 QFDIATYYSQIFWLIVTFGLLYIFVYKFITPKAEEIFNNRQTNIQDNITQADTLTIEVEKLNKYYNEEIDKTNTEI 78 (155)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666678888889999999999999877666544 3455566677777999998765443
No 9
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=20.95 E-value=63 Score=30.91 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=29.2
Q ss_pred eecCCCchhhHHHHHHHHHHHHHHhhhhhhhc--CCCCCCc
Q 013127 60 GFNHSSVLSFVLSWTAFVVTGVLVPVVILELS--NCPGCEK 98 (449)
Q Consensus 60 ~ldqSs~~~~~~Sw~~F~~l~v~vP~~~~~~~--~c~~cd~ 98 (449)
|+..-++.++.--...+++++++||++.+.++ -|++..+
T Consensus 17 cls~~~~psffsthm~tILiaIvVliiiiivli~lcssRKk 57 (189)
T PF05568_consen 17 CLSPVTPPSFFSTHMYTILIAIVVLIIIIIVLIYLCSSRKK 57 (189)
T ss_pred hcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Confidence 45666788888889999999999998875543 3664443
No 10
>KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms]
Probab=19.86 E-value=7e+02 Score=25.03 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=52.0
Q ss_pred ccceeeeccccCchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhheeeeee------cccchhHHHHHHHHHHHHH
Q 013127 131 GIRKFLFVDRHSGHMERFHYQYIQQIKDSLRLLILWSLPCFILKTAREIIRILYV------HHESWWQSAAILFALILSW 204 (449)
Q Consensus 131 GLRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~a~ki~w~~~~------~~~~p~~s~~~l~~~l~SW 204 (449)
++||-+|.|++. .+-....+..+..+.++++ .++++.++||.-|... +...|.+... ..+..+=
T Consensus 26 r~~~~~~~~~~~-------~~~~~~~~~~i~~~~~vil-llfiDsvr~i~~~~~~~~~~~n~~~~~~a~~~--~~~~l~r 95 (216)
T KOG1962|consen 26 RRRRKIFKDRLK-------SGLAPQVLKTIATTMIVIL-LLFIDSVRRIQKYVSEYGSMANPTDQPLARTH--LLEALFR 95 (216)
T ss_pred HHHHHHHHHHHH-------HhhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhhhcccCCccchHHHHH--HHHHHHH
Confidence 456667777543 2333445566666665555 5667999999877665 1223332222 2233333
Q ss_pred HHH------HHHHHHHHH--HHHHhhhhhhhhh
Q 013127 205 TYL------STISLSASI--LFHVVCNLQVMHF 229 (449)
Q Consensus 205 ~Yr------T~ifll~CV--LFrLiC~LQiLR~ 229 (449)
.|| .++||..|+ +++++|.|..+|=
T Consensus 96 aqrn~YisGf~LFL~lvI~R~~~ll~~l~~l~~ 128 (216)
T KOG1962|consen 96 AQRNLYISGFVLFLSLVIRRLHTLLRELATLRA 128 (216)
T ss_pred HHhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333 367777776 6888998888874
Done!