BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013128
(449 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54DY9|BCS1B_DICDI Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum
GN=bcsl1b PE=3 SV=1
Length = 458
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 157/299 (52%), Gaps = 41/299 (13%)
Query: 170 HVLEKAKAI---KEESKVVKLHTVMHMRWDANNIVLKHPM---TFKTLALDSELKREITE 223
+++E+AK + KEE K + ++T M W HP ++ LD I +
Sbjct: 167 NLIEEAKEMALEKEEGKTL-IYTSMGTDWRR----FGHPRRKRPISSVILDKGKSELIIQ 221
Query: 224 DLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDLDLSAVQ-SN 282
D++ F+N ++Y G ++RGYLLYGPPGTGKSS I A+A +L+ I L+L+ S+
Sbjct: 222 DVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSD 281
Query: 283 SELRFLLLTMPSRSMLVIEDIDCSVKLQNRE-SSEVQATNQEE----------------- 324
+ L LL T P RS++++EDID +++ N + S++ + N
Sbjct: 282 TSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSV 341
Query: 325 ----NKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLHMSYCNT 380
+ +T SGLLN +DG+ EGRI+ TTNH EKLD L+RPGR+D+ + + C++
Sbjct: 342 SSGGSALTFSGLLNALDGV--AASEGRILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSS 399
Query: 381 SVFKQLAFNYLGISHHYLFEQIEELIKEVNVTPAEVAGELMKSTNAEV----SLNGLVK 435
+Q+ + L +Q E ++ +PA++ M +N + +LN L+K
Sbjct: 400 YQMEQMFLKFYPTDFD-LAKQFVEKLENYKFSPAQLQAYFMTYSNNSIEAINNLNELIK 457
>sp|Q7ZV60|BCS1_DANRE Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2
Length = 420
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 140/258 (54%), Gaps = 12/258 (4%)
Query: 171 VLEKAK--AIKEESKVVKLHTVMHMRWDANNIVLKHPMTFKTLALDSELKREITEDLENF 228
+L++A+ A+K+E ++T M W + ++ L+S + I +D++ F
Sbjct: 150 ILQEARELALKQEEGRTVMYTAMGAEWRPFGFPRRR-RPLSSVVLESGVAERIVDDVKEF 208
Query: 229 MNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDLDLSAVQ-SNSELRF 287
+ ++YT G ++RGYLLYGPPG GKSS I A+A +L + I + LS S+ L
Sbjct: 209 IGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDDRLNH 268
Query: 288 LLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVTLSGLLNFIDGLWSCCGEGR 347
LL P +S++++ED+D + + +E Q ++T SGLLN +DG+ S E R
Sbjct: 269 LLSVAPQQSIILLEDVDAAFVSRELLPTENPLAYQGMGRLTFSGLLNALDGVASS--EAR 326
Query: 348 IIVFTTNHKEKLDPALLRPGRMDMHLHMSYCN----TSVFKQLAFNYLGISHHYLFEQIE 403
I+ TTN E+LDPAL+RPGR+D+ ++ +C+ T +F++ + EQ
Sbjct: 327 IVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHWQLTQMFRRFYPQESAAEADHFSEQ-- 384
Query: 404 ELIKEVNVTPAEVAGELM 421
L +++ A+V G M
Sbjct: 385 ALAAHTDLSAAQVQGHFM 402
>sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
Length = 449
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 137/238 (57%), Gaps = 14/238 (5%)
Query: 186 KLHTVMHMRWDANNIVLKHPMTFKTLA---LDSELKREITEDLENFMNGKEYYTRIGRAW 242
K T ++ W HP + + L+ L+S +K+ IT+D+ +F+ ++Y G +
Sbjct: 182 KNKTTIYTAWATEWKPFGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPY 241
Query: 243 KRGYLLYGPPGTGKSSLIAAMANQLKFDIYDLDLSAVQ-SNSELRFLLLTMPSRSMLVIE 301
+RGYLLYGPPG+GK+S + A+A +L +DI L+L+ ++ L LL +P ++++++E
Sbjct: 242 RRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLE 301
Query: 302 DIDCSVKLQNRE-SSEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLD 360
D+D + Q RE S EV VT SGLLN +DG+ S + RII TTNH EKLD
Sbjct: 302 DVDSA--FQGRERSGEVGF----HANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLD 353
Query: 361 PALLRPGRMDMHLHMSYCNTSVFKQLAFNYLGISHHYLFEQIEELIKEVNVTPAEVAG 418
PAL+RPGR+D+ ++ +++ + G S + + + +++ N + A + G
Sbjct: 354 PALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPE-MADDLSDIVCPKNTSMASLQG 410
>sp|Q9Y276|BCS1_HUMAN Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1
Length = 419
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 145/269 (53%), Gaps = 17/269 (6%)
Query: 170 HVLEKAKAI---KEESKVVKLHTVMHMRWDANNIVLKHPMTFKTLALDSELKREITEDLE 226
++LE+A+ + +EE K V ++T + W + ++ L L I D++
Sbjct: 149 NILEEARELALQQEEGKTV-MYTAVGSEWRPFGYPRRR-RPLNSVVLQQGLADRIVRDVQ 206
Query: 227 NFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDI-YDLDLSAVQSNSEL 285
F++ ++YT G ++RGYLLYGPPG GKSS I A+A +L+ I + S+ L
Sbjct: 207 EFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRL 266
Query: 286 RFLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVTLSGLLNFIDGLWSCCGE 345
LL P +S++++ED+D + L + E Q ++T SGLLN +DG+ S E
Sbjct: 267 NHLLSVAPQQSLVLLEDVDAAF-LSRDLAVENPVKYQGLGRLTFSGLLNALDGVAST--E 323
Query: 346 GRIIVFTTNHKEKLDPALLRPGRMDMHLHMSYCN----TSVFKQLAFNYLGISHHYLFEQ 401
RI+ TTNH ++LDPAL+RPGR+D+ ++ YC+ T +F++ Y G +
Sbjct: 324 ARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRF---YPGQAPSLAENF 380
Query: 402 IEELIKEVN-VTPAEVAGELMKSTNAEVS 429
E +++ N ++PA+V G M N V
Sbjct: 381 AEHVLRATNQISPAQVQGYFMLYKNDPVG 409
>sp|Q5E9H5|BCS1_BOVIN Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1
Length = 419
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 139/262 (53%), Gaps = 11/262 (4%)
Query: 170 HVLEKAKAI---KEESKVVKLHTVMHMRWDANNIVLKHPMTFKTLALDSELKREITEDLE 226
++LE+A+ + +EE K V ++T + W + ++ L+ + I D+
Sbjct: 149 NILEEARELALQQEEGKTV-MYTAVGSEWRPFGYPRRR-RPLNSVVLEQGVTERIVRDIR 206
Query: 227 NFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDI-YDLDLSAVQSNSEL 285
F++ ++Y G ++RGYLLYGPPG GKSS I A+A +L+ I + S+ L
Sbjct: 207 EFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRL 266
Query: 286 RFLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVTLSGLLNFIDGLWSCCGE 345
LL P +S++++ED+D + L ++E Q ++T SGLLN +DG+ S E
Sbjct: 267 NHLLSVAPQQSLVLLEDVDAAF-LSRDLAAENPIKYQGLGRLTFSGLLNALDGVAST--E 323
Query: 346 GRIIVFTTNHKEKLDPALLRPGRMDMHLHMSYCNTSVFKQLAFNYLGISHHYLFEQIEEL 405
RI+ TTNH ++LDPAL+RPGR+DM ++ +C+ Q+ + L E +
Sbjct: 324 ARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMFQRFYPGQATSLAENFADR 383
Query: 406 IKEV--NVTPAEVAGELMKSTN 425
+ + ++PA+V G M N
Sbjct: 384 VLQATTQISPAQVQGYFMLYKN 405
>sp|Q9CZP5|BCS1_MOUSE Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1
Length = 418
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 139/262 (53%), Gaps = 11/262 (4%)
Query: 170 HVLEKAKAI---KEESKVVKLHTVMHMRWDANNIVLKHPMTFKTLALDSELKREITEDLE 226
++LE+A+A+ +EE K V ++T + W + ++ L L I +D+
Sbjct: 149 NILEEARALALQQEEGKTV-MYTAVGSEWRTFGYPRRR-RPLDSVVLQQGLADRIVKDIR 206
Query: 227 NFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDI-YDLDLSAVQSNSEL 285
F++ ++Y G ++RGYLLYGPPG GKSS I A+A +L+ I + S+ L
Sbjct: 207 EFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRL 266
Query: 286 RFLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVTLSGLLNFIDGLWSCCGE 345
LL P +S++++ED+D + L + E Q ++T SGLLN +DG+ S E
Sbjct: 267 NHLLSVAPQQSLVLLEDVDAAF-LSRDLAVENPIKYQGLGRLTFSGLLNALDGVAST--E 323
Query: 346 GRIIVFTTNHKEKLDPALLRPGRMDMHLHMSYCNTSVFKQLAFNYLGISHHYLFEQIEEL 405
RI+ TTN+ ++LDPAL+RPGR+D+ ++ YC+ Q+ + L E E
Sbjct: 324 ARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEH 383
Query: 406 IKEVN--VTPAEVAGELMKSTN 425
+ + ++PA+V G M N
Sbjct: 384 VLKATSEISPAQVQGYFMLYKN 405
>sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2
Length = 456
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 103/162 (63%), Gaps = 8/162 (4%)
Query: 210 TLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKF 269
++ LDS +K I +D+ +FM ++Y+ G ++RGYLLYGPPG+GK+S I A+A +L +
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 286
Query: 270 DIYDLDLSAVQ-SNSELRFLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVT 328
+I L+LS ++ L L+ MP RS+L++EDID + R + Q + + VT
Sbjct: 287 NICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAA--FNKRSQTGEQGFH---SSVT 341
Query: 329 LSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMD 370
SGLLN +DG+ S E I TTNH EKLD A++RPGR+D
Sbjct: 342 FSGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRID 381
>sp|Q7ZTL7|BCS1_XENLA Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1
Length = 419
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 127/225 (56%), Gaps = 9/225 (4%)
Query: 170 HVLEKAKAIKEESKVVKLHTVMHMRWDANNIVLKHPMTFKTLA---LDSELKREITEDLE 226
++L++A+ + + +V K TVM+ A P + L+ L+ + +I +D++
Sbjct: 149 NILQEARELALKQQVGK--TVMYNAVGAEWRQFGFPRRRRPLSSVVLEQGISEKIVQDVK 206
Query: 227 NFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDI-YDLDLSAVQSNSEL 285
F+ ++Y+ G ++RGYLLYGPPG GKSS I A+A +L++ I + S+ L
Sbjct: 207 GFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSDDRL 266
Query: 286 RFLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVTLSGLLNFIDGLWSCCGE 345
LL P +S++++ED+D + ++ A Q ++T SGLLN +DG+ S E
Sbjct: 267 NHLLSVAPQQSIILLEDVDAAFVSRDLNKQNPTAY-QGMGRLTFSGLLNALDGVAST--E 323
Query: 346 GRIIVFTTNHKEKLDPALLRPGRMDMHLHMSYCNTSVFKQLAFNY 390
RI+ TTNH ++LDPAL+RPGR+D+ ++ +C Q+ +
Sbjct: 324 ARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHCTNWQLSQMFLRF 368
>sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum
GN=bcs1la PE=3 SV=1
Length = 421
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 130/228 (57%), Gaps = 7/228 (3%)
Query: 204 HPMTFKTLA---LDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLI 260
+P + ++L+ L +LK ++ ED+++F+ + +Y G ++RGYLLYG PG GKSSLI
Sbjct: 179 NPRSIRSLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLI 238
Query: 261 AAMANQLKFDIYDLDLSAVQ-SNSELRFLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQA 319
A+A +L DI + LS+ + ++ LL P +S+L+IEDID + K
Sbjct: 239 NAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFKSHRDNVDSNNN 298
Query: 320 TNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLHMSYCN 379
+ N +T SGLLN +DG+ EGRI+ TTN E LD AL+R GR+D+ + +S
Sbjct: 299 NSNNNNSLTYSGLLNALDGV--ASQEGRILFMTTNKIELLDSALIREGRIDLKIKVSNAT 356
Query: 380 TSVFKQLAFNYLGI-SHHYLFEQIEELIKEVNVTPAEVAGELMKSTNA 426
S QL ++ + + + L + E + + ++ +++ G L+K N+
Sbjct: 357 KSQAAQLFTHFYNLPTDNQLAIRFSENLHDHQLSMSQIQGFLLKYINS 404
>sp|Q5UR45|YL572_MIMIV Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L572 PE=3 SV=1
Length = 196
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 105/191 (54%), Gaps = 30/191 (15%)
Query: 259 LIAAMANQLKFDIYDLDLSAVQSNSELRFLLLTMPSR-SMLVIEDIDCS---VKLQNRES 314
+I A++ K I+ L L+ +Q ++EL LL + + ++LV+EDIDC+ VK + +E
Sbjct: 1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRAKEE 60
Query: 315 SEV--QATNQE---ENKV--------------TLSGLLNFIDGLWSCCGEGRIIVFTTNH 355
V + T+ + ENK+ TLSG+LN +DG+++ EGRI++ TTNH
Sbjct: 61 ETVVEKVTDDKSTLENKILADQLKKVEKVSKLTLSGILNSLDGIFN--SEGRIVIMTTNH 118
Query: 356 KEKLDPALLRPGRMDMHLHMSYCNTSVFKQLAFNYLGI-SHHYLFEQIEELIKEVNVTPA 414
E LDPAL+R GR+DM + S C+ ++ N+ G + + +I I +PA
Sbjct: 119 SEVLDPALIRRGRIDMQIEFSNCDRYQIAKMYENFYGKNADSDILSKIPSDI----YSPA 174
Query: 415 EVAGELMKSTN 425
V+G L+ N
Sbjct: 175 HVSGLLLSYRN 185
>sp|B3R057|FTSH1_PHYMT ATP-dependent zinc metalloprotease FtsH 1 OS=Phytoplasma mali
(strain AT) GN=ftsH1 PE=3 SV=1
Length = 600
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 19/178 (10%)
Query: 203 KHPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAA 262
K TFK +A ++E K E+TE L +F+ + Y IG A +G LL GPPGTGK+ L A
Sbjct: 169 KSLFTFKDVAGNTEEKEEMTE-LIDFLKQPQKYETIGAAIPKGVLLEGPPGTGKTLLAKA 227
Query: 263 MANQLKFDIYD------LDLSAVQSNSELRFLL----LTMPSRSMLVIEDIDCSVKLQNR 312
+A + Y +++ S +R L L P +L I++ID L +
Sbjct: 228 LAGEASVPFYAVSGSEFVEMYVGVGASRVRTLFKEAKLNAP--CVLFIDEIDV---LGGK 282
Query: 313 ESSEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMD 370
NQE+++ TL+ LL +DG +G I++ TN + LD ALLRPGR D
Sbjct: 283 RGGNSSGGNQEKDQ-TLNQLLTEMDGFTQA--KGIIVIGATNRADMLDAALLRPGRFD 337
>sp|A9FDV9|FTSH2_SORC5 ATP-dependent zinc metalloprotease FtsH 2 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH2 PE=3 SV=1
Length = 607
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 207 TFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQ 266
TF+ +A ++E K E++E + +F+ E Y ++G RG LL GPPGTGK+ L A+A +
Sbjct: 153 TFRDVAGNAEAKTELSE-IVDFLKAPERYEKLGGRMPRGVLLVGPPGTGKTLLARAIAGE 211
Query: 267 LKFDIYD------LDLSAVQSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRESSEVQ 318
+ +++ + +R L + ++ I+++D K++ S
Sbjct: 212 ASVPFFSASGSEFVEMFVGVGAARVRDLFSQAREKGACLVFIDELDAVGKVRGLGGS--- 268
Query: 319 ATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLHMSYC 378
+E + TL+ LL +DG + +++ TN E LDPALLRPGR D +H+
Sbjct: 269 VGGHDEREQTLNQLLTEMDGFDAHT--AMVVIGATNRAEILDPALLRPGRFDRRVHIDRP 326
Query: 379 NTSVFKQL 386
+ + K++
Sbjct: 327 DLAERKEI 334
>sp|A6LD25|FTSH_PARD8 ATP-dependent zinc metalloprotease FtsH OS=Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
GN=ftsH PE=3 SV=1
Length = 684
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 101/189 (53%), Gaps = 14/189 (7%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
+TFK +A +E K+E+ E++ +F+ E YT +G +G LL GPPGTGK+ L A+A
Sbjct: 193 VTFKDVAGLAEAKQEV-EEIVSFLKNPEKYTELGGKIPKGALLVGPPGTGKTLLAKAVAG 251
Query: 266 QLKFDIYDL------DLSAVQSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRESSEV 317
+ + L ++ S +R L +S ++ I++ID + + + ++ +
Sbjct: 252 EANVPFFSLSGSDFVEMFVGVGASRVRDLFRQAKEKSPCIVFIDEIDAVGRARGK-NANM 310
Query: 318 QATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLHMSY 377
+ ++ EN TL+ LL +DG S G II+ TN + LD ALLR GR D +H+
Sbjct: 311 NSNDEREN--TLNQLLTEMDGFGSNS--GVIILAATNRADILDKALLRAGRFDRQIHVEL 366
Query: 378 CNTSVFKQL 386
+ + K++
Sbjct: 367 PDLNERKEI 375
>sp|Q2NIN5|FTSH_AYWBP ATP-dependent zinc metalloprotease FtsH OS=Aster yellows
witches'-broom phytoplasma (strain AYWB) GN=ftsH PE=3
SV=1
Length = 676
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 24/262 (9%)
Query: 175 AKAIKEESKVVKLHTVMHMRWDANNIVLKHP-MTFKTLALDSELKREITEDLENFMNGKE 233
A IK+ + + T + +++ H TF +A E K E++E L +F+
Sbjct: 137 ADTIKQMGQEILASTSGKKGAKSRKVIINHKRFTFSDVAGADEEKEEMSE-LIDFLKNPR 195
Query: 234 YYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIY-----DLDLSAVQ-SNSELRF 287
Y +G +G LLYGPPGTGK+ L A+A + + D D V S +R
Sbjct: 196 KYAAMGARIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFAASGSDFDEVYVGVGASRVRD 255
Query: 288 LL--LTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVTLSGLLNFIDGLWSCCGE 345
L + + ++ I++I+ + + S + +N E TL+ LL +DG
Sbjct: 256 LFKEAQLAAPCIVFIDEIEAVAR---KRGSNIGGSNGSEQ--TLNQLLVEMDGFNQKM-- 308
Query: 346 GRIIVFTTNHKEKLDPALLRPGRMDMHLHMSYCNTSVFKQLAFNYLGISHHYLFEQI--E 403
G I++ TN E LD A+LRPGR D H +++ N V + A L S+ L E+I E
Sbjct: 309 GVIVIAATNQPEVLDSAILRPGRFDRHFNITLPN--VKDREAILKLHASNKKLSEEISLE 366
Query: 404 ELIKEVNVTPAEVAGELMKSTN 425
EL K+ TP +L + N
Sbjct: 367 ELAKQ---TPGFSGAQLEGTLN 385
>sp|B3R0R7|FTSH3_PHYMT ATP-dependent zinc metalloprotease FtsH 3 OS=Phytoplasma mali
(strain AT) GN=ftsH3 PE=3 SV=1
Length = 599
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 19/178 (10%)
Query: 203 KHPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAA 262
K TFK +A ++E K E+TE L +F+ + Y IG A RG LL GPPGTGK+ L A
Sbjct: 168 KSLFTFKDVAGNTEEKEEMTE-LIDFLKQPQKYETIGAAIPRGVLLEGPPGTGKTLLAKA 226
Query: 263 MANQLKFDIYD------LDLSAVQSNSELRFLL----LTMPSRSMLVIEDIDCSVKLQNR 312
+A + Y +++ S +R L L P +L I++ID L R
Sbjct: 227 LAGEASVPFYAVSGSEFVEMYVGVGASRVRKLFKEAKLNAP--CVLFIDEIDV---LGGR 281
Query: 313 ESSEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMD 370
NQE+++ TL+ LL +DG +G I++ TN + LD ALLRPGR D
Sbjct: 282 RGGNSSGGNQEKDQ-TLNQLLTEMDGF--TPSQGIIVIGATNRADMLDAALLRPGRFD 336
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 15/177 (8%)
Query: 205 PMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMA 264
P TF+ +A E E+ E + +F+ E Y +G +G LL GPPGTGK+ L A+A
Sbjct: 247 PTTFEDVAGIEEAVDEVRE-VVDFLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLAKAIA 305
Query: 265 NQLKFDIYDLDLS------AVQSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRESSE 316
+ + L S + +R + +R+ ++ I+++D K +R S
Sbjct: 306 GEAGVPFFSLSGSDFVEMFVGVGAARVRDMFTQAVNRAPCIIFIDELDALGK--SRSGSV 363
Query: 317 VQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
V ++ E TL+ LL +DG S G I+V TN E LDPALLRPGR D H+
Sbjct: 364 VGGHDEREQ--TLNALLVEMDGFDSNSG--VIVVAATNRPETLDPALLRPGRFDRHV 416
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 216 ELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDLD 275
E K++I E +E M E + R+G +G LLYGPPGTGK+ L A+AN++ ++
Sbjct: 219 EAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVN 278
Query: 276 LSAVQSN----SELR----FLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKV 327
+ S SE R F + S++ I++ID + + EV+ K
Sbjct: 279 GPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTGEVE-------KR 331
Query: 328 TLSGLLNFIDGLWSCCGEGRIIVF-TTNHKEKLDPALLRPGRMDMHLHMSYCNTSVFKQL 386
++ LL +DG+ G GR+IV TN + +DPAL RPGR D + + +T K +
Sbjct: 332 VVAQLLTLMDGI---KGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDI 388
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 217 LKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDLDL 276
+K+++ E +E + E +T+ G +G LL+GPPGTGK+ L A+A + + +
Sbjct: 495 VKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRG 554
Query: 277 SAV------QSNSELR--FLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVT 328
+ +S +R F + +++ ++ID ++ +T+ +
Sbjct: 555 PEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRG------LSTDSGVTERI 608
Query: 329 LSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLHMS 376
++ LL +DG+ +I+ TN + LDPALLRPGR D +++
Sbjct: 609 VNQLLAEMDGIVPL--NKVVIIAATNRPDILDPALLRPGRFDRLIYVP 654
>sp|D0MGU8|FTSH_RHOM4 ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=ftsH PE=3 SV=1
Length = 697
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 14/178 (7%)
Query: 204 HPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAM 263
H +TFK +A E K E+ E +E F+ + +TR+G +G LL GPPGTGK+ L A+
Sbjct: 206 HRVTFKDVAGLDEAKEEVAEIVE-FLKNPKKFTRLGGKLPKGVLLVGPPGTGKTLLAKAV 264
Query: 264 ANQLKFDIYDL------DLSAVQSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRESS 315
A + + + ++ + +R L ++ ++ I++ID + + R
Sbjct: 265 AGEAGVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDAIGRSRGR-GI 323
Query: 316 EVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
+ A ++ EN TL+ LL +DG +G II+ TN + LDPALLRPGR D +
Sbjct: 324 MMGANDEREN--TLNQLLVEMDGF--NTDKGVIIMAATNRPDVLDPALLRPGRFDRQI 377
>sp|Q5UPR4|YR776_MIMIV Uncharacterized protein R776 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R776 PE=4 SV=1
Length = 314
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 40/230 (17%)
Query: 137 LGDYNASLRSE--VRHYELSFHKKHKDVVLN-------LY-LPHVLEKAKAIKEESKVVK 186
+ D+ + +R E V Y++ +KH + +N LY LP + IK+++ +K
Sbjct: 71 INDFGSQIRYELNVGFYKIK-TRKHGWIFVNYVDNKLILYKLPKISFFPPQIKKQTNRLK 129
Query: 187 -----LHTV------MHMRWDANN-----IVLKHPMTFKTLALDSELKREITEDLENFMN 230
+H++ M M + +NN +++ P F L +E+ R + +D++ FM
Sbjct: 130 KFIDSVHSISCRPDEMRMCYTSNNNNWSYPIIRRPCKFLDSNLTTEM-RSVLKDVDVFMR 188
Query: 231 GKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDLDL-SAVQSNSELRFLL 289
++ Y +G ++RG LLYG G GK+ LI+ ++N+ D Y L+L S S+S L L
Sbjct: 189 NEDTYRELGANYRRGMLLYGESGCGKTGLISIISNKYGMDSYILNLNSKDMSDSVLISLA 248
Query: 290 LTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENK-VTLSGLLNFIDG 338
+ +RS+LVIE+ID +++ N NK V++ GLL+ +DG
Sbjct: 249 SNVKARSILVIEEID----------KQIETLNANGNKNVSIGGLLSALDG 288
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
+TF +A E+K E+ E + +F+ + Y +G +G LLYGPPGTGK+ L A+A
Sbjct: 154 VTFDDVAGIDEVKEELAE-IVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAG 212
Query: 266 QLKFDIYDL------DLSAVQSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRESSEV 317
+ + + ++ S +R L S ++ I++ID R+
Sbjct: 213 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAV----GRQRGAG 268
Query: 318 QATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
+E + TL+ LL +DG EG II+ TN + LDPALLRPGR D +
Sbjct: 269 YGGGHDEREQTLNQLLVEMDGF--SANEGIIIIAATNRPDVLDPALLRPGRFDRQI 322
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 17/177 (9%)
Query: 212 ALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDI 271
L+S+LK I E +E + E + G RG LLYGPPGTGK+ + A+AN++ +
Sbjct: 357 GLNSQLK-AIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYV 415
Query: 272 YDLDLSAV------QSNSELR--FLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQE 323
++ + ++ + LR F T+ S++ I+++D + SEV+
Sbjct: 416 SVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVE----- 470
Query: 324 ENKVTLSGLLNFIDGLWSCCGEGRIIVF-TTNHKEKLDPALLRPGRMDMHLHMSYCN 379
K ++ LL +DG+ S EGR++V TN + LD AL RPGR D + + N
Sbjct: 471 --KRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 235 YTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDLDLSAV------QSNSELR-- 286
+ R+G +G LLYGPPG K+ + A+AN+ + + + +S +R
Sbjct: 653 FNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREI 712
Query: 287 FLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVTLSGLLNFIDGLWSCCGEG 346
F + S++ +++D L S A N + L+ LL +DG+ +
Sbjct: 713 FRKARAVAPSIIFFDELDA---LAVERGSSSGAGNVADR--VLAQLLTEMDGIEQL--KN 765
Query: 347 RIIVFTTNHKEKLDPALLRPGRMDMHLHMSYCNTSVFKQ---LAFNYLGISHHYLFEQI 402
++ TN +++D AL+RPGR+D +++ + + ++ L F+ + IS+ +++
Sbjct: 766 VTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDEL 824
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 15/192 (7%)
Query: 203 KHPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAA 262
K +TFK +A E K E+ E +E F+ + + ++G +G L+ GPPGTGK+ L A
Sbjct: 147 KTKVTFKDVAGVEEAKEEVQELVE-FLKDPKKFQKLGGRIPKGVLMVGPPGTGKTLLAKA 205
Query: 263 MANQLKF--------DIYDLDLSAVQSNSELRFLLLTMPSRSMLVIEDIDCSVKLQNRES 314
+A + D ++ + S F + ++ I++ID R
Sbjct: 206 IAGEADVPFFSISGSDFVEMFVGVGASRVRDMFEQARRHAPCIVFIDEIDAV----GRAR 261
Query: 315 SEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLH 374
+E + TL+ LL +DG+ S EG I++ TN K+ LDPALLRPGR D +
Sbjct: 262 GTGLGGGHDEREQTLNALLVEMDGIESQ--EGVIVIAATNRKDVLDPALLRPGRFDREVR 319
Query: 375 MSYCNTSVFKQL 386
++ + +Q+
Sbjct: 320 VNLPDIRGREQI 331
>sp|Q9HGM3|YTA12_SCHPO Mitochondrial respiratory chain complexes assembly protein rca1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=yta12 PE=3 SV=1
Length = 773
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 26/195 (13%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
+ F +A E K EI E ++ F+ ++Y R+G RG +L GPPGTGK+ L A A
Sbjct: 293 IKFADVAGVDEAKEEIMEFVK-FLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAG 351
Query: 266 QLKFDIYDLDLSAVQSNSELRFLLLTMPSR-------------SMLVIEDIDCSVKLQNR 312
+ ++ +V + L + PSR ++ I++ID K + R
Sbjct: 352 EA-----NVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGR 406
Query: 313 ESSEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFT-TNHKEKLDPALLRPGRMDM 371
Q + +E + TL+ LL +DG S I+VF TN + LDPALLRPGR D
Sbjct: 407 GG---QFGSNDERESTLNQLLVEMDGFTSSE---HIVVFAGTNRPDVLDPALLRPGRFDR 460
Query: 372 HLHMSYCNTSVFKQL 386
+ + + +Q+
Sbjct: 461 QITIDRPDIGGREQI 475
>sp|Q67T82|FTSH2_SYMTH ATP-dependent zinc metalloprotease FtsH 2 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH2 PE=3 SV=1
Length = 587
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 14/187 (7%)
Query: 203 KHPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAA 262
+ P+TF +A E+K E+ E++ +++ + Y IG +G LLYGPPGTGK+ L A
Sbjct: 146 ESPVTFADVAGMDEVKGEL-EEIVDYLKNPDKYRAIGARIPKGVLLYGPPGTGKTLLARA 204
Query: 263 MANQLKFDIYDLDLSAV------QSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRES 314
+A + + L S+ S +R L + ++ I++ID + +
Sbjct: 205 VAGEAGVPFFALSGSSFVELFVGMGASRVRELFAQARKNAPCIVFIDEIDA---VGRQRG 261
Query: 315 SEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLH 374
S +E + TL+ LL +DG + EG I++ TN + LD ALLRPGR D +
Sbjct: 262 SAAVVGGHDEREQTLNQLLTEMDGFGAY--EGVIVMAATNRPDVLDKALLRPGRFDRQIP 319
Query: 375 MSYCNTS 381
+ + +
Sbjct: 320 VGPPDAA 326
>sp|Q2SF13|FTSH_HAHCH ATP-dependent zinc metalloprotease FtsH OS=Hahella chejuensis
(strain KCTC 2396) GN=ftsH PE=3 SV=1
Length = 619
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 207 TFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQ 266
TF +A + KRE+ E +E ++ + + R+G RG LL GPPGTGK+ L A+A +
Sbjct: 174 TFDEVAGQTNAKREVQELVE-YLRDPDRFHRVGALAPRGVLLMGPPGTGKTLLARALAGE 232
Query: 267 LKFDIYDLDLSAV------QSNSELR--FLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQ 318
+ Y + S S +R F + S S++ I+++D R
Sbjct: 233 AGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELDSV----GRTRGAGY 288
Query: 319 ATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVF-TTNHKEKLDPALLRPGRMDMHLHMSY 377
+E + TL+ +L +DG G +IV TN + LDPAL+RPGR D H+ +
Sbjct: 289 GGGHDEREQTLNQILAEMDGF---AGHDAVIVLAATNRPDVLDPALMRPGRFDRHVTLDL 345
Query: 378 CN 379
+
Sbjct: 346 PD 347
>sp|O74445|PRS10_SCHPO Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpt4 PE=3 SV=2
Length = 388
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 16/191 (8%)
Query: 199 NIVLKHP--MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGK 256
N+ ++ P ++F + +E RE+ E +E + E + R+G +G LLYGPPGTGK
Sbjct: 120 NMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGK 179
Query: 257 SSLIAAMANQLKFDIYDLDLSAV------QSNSELRFLLLTMPSRSMLVI--EDIDCSVK 308
+ L A+A L + + SA+ +S +R + VI ++ID
Sbjct: 180 TLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDA--- 236
Query: 309 LQNRESSEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGR 368
+ R SE + ++E + TL LLN +DG + G+ +II TN + LDPALLRPGR
Sbjct: 237 IGGRRFSEGTSADREIQR-TLMELLNQMDG-FDYLGQTKII-MATNRPDTLDPALLRPGR 293
Query: 369 MDMHLHMSYCN 379
+D + + N
Sbjct: 294 LDRKIEIPLPN 304
>sp|P62335|PRS10_SPETR 26S protease regulatory subunit 10B OS=Spermophilus
tridecemlineatus GN=PSMC6 PE=2 SV=1
Length = 389
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 16/174 (9%)
Query: 215 SELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDL 274
SE RE+ E +E + E + R+G +G LLYGPPGTGK+ L A+A+QL + +
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 275 DLSAVQSN--SELRFLLLTM------PSRSMLVIEDIDCSVKLQNRESSEVQATNQEENK 326
S++ E L+ M ++ +++ID + R SE + ++E +
Sbjct: 199 VSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQR 255
Query: 327 VTLSGLLNFIDGLWSCCGEGRI-IVFTTNHKEKLDPALLRPGRMDMHLHMSYCN 379
TL LLN +DG + R+ ++ TN + LDPALLRPGR+D +H+ N
Sbjct: 256 -TLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
>sp|P62334|PRS10_MOUSE 26S protease regulatory subunit 10B OS=Mus musculus GN=Psmc6 PE=1
SV=1
Length = 389
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 16/174 (9%)
Query: 215 SELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDL 274
SE RE+ E +E + E + R+G +G LLYGPPGTGK+ L A+A+QL + +
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 275 DLSAVQSN--SELRFLLLTM------PSRSMLVIEDIDCSVKLQNRESSEVQATNQEENK 326
S++ E L+ M ++ +++ID + R SE + ++E +
Sbjct: 199 VSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQR 255
Query: 327 VTLSGLLNFIDGLWSCCGEGRI-IVFTTNHKEKLDPALLRPGRMDMHLHMSYCN 379
TL LLN +DG + R+ ++ TN + LDPALLRPGR+D +H+ N
Sbjct: 256 -TLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
>sp|P62333|PRS10_HUMAN 26S protease regulatory subunit 10B OS=Homo sapiens GN=PSMC6 PE=1
SV=1
Length = 389
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 16/174 (9%)
Query: 215 SELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDL 274
SE RE+ E +E + E + R+G +G LLYGPPGTGK+ L A+A+QL + +
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 275 DLSAVQSN--SELRFLLLTM------PSRSMLVIEDIDCSVKLQNRESSEVQATNQEENK 326
S++ E L+ M ++ +++ID + R SE + ++E +
Sbjct: 199 VSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQR 255
Query: 327 VTLSGLLNFIDGLWSCCGEGRI-IVFTTNHKEKLDPALLRPGRMDMHLHMSYCN 379
TL LLN +DG + R+ ++ TN + LDPALLRPGR+D +H+ N
Sbjct: 256 -TLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
>sp|P71408|FTSH_HELPY ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ftsH PE=1 SV=2
Length = 632
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 203 KHPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAA 262
K + F +A + E K E+ E + +F+ E Y +G +G LL GPPGTGK+ L A
Sbjct: 164 KPNVRFNDMAGNEEAKEEVVE-IVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKA 222
Query: 263 MANQLKFDIYDLDLSAV------QSNSELRFLLLTMPSR--SMLVIEDIDCSVKLQNRES 314
+A + + + S+ S +R L T + S++ I++ID K +R +
Sbjct: 223 VAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGK--SRAA 280
Query: 315 SEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
V + N E + TL+ LL +DG S I++ TN E LDPAL+RPGR D +
Sbjct: 281 GGVVSGNDEREQ-TLNQLLAEMDGFGSENAP-VIVLAATNRPEILDPALMRPGRFDRQV 337
>sp|Q2KIW6|PRS10_BOVIN 26S protease regulatory subunit 10B OS=Bos taurus GN=PSMC6 PE=2
SV=1
Length = 389
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 16/174 (9%)
Query: 215 SELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDL 274
SE RE+ E +E + E + R+G +G LLYGPPGTGK+ L A+A+QL + +
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 275 DLSAVQSN--SELRFLLLTM------PSRSMLVIEDIDCSVKLQNRESSEVQATNQEENK 326
S++ E L+ M ++ +++ID + R SE + ++E +
Sbjct: 199 VSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQR 255
Query: 327 VTLSGLLNFIDGLWSCCGEGRI-IVFTTNHKEKLDPALLRPGRMDMHLHMSYCN 379
TL LLN +DG + R+ ++ TN + LDPALLRPGR+D +H+ N
Sbjct: 256 -TLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
>sp|P73437|FTSH4_SYNY3 ATP-dependent zinc metalloprotease FtsH 4 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH4 PE=2 SV=1
Length = 628
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
+TF +A E K E++E + +F+ + YT +G +G LL GPPGTGK+ L A A
Sbjct: 171 VTFDDVAGVEEAKTELSE-VVDFLKFPQRYTALGAKIPKGVLLVGPPGTGKTLLAKAAAG 229
Query: 266 QLKFDIY--------DLDLSAVQSNSELRFLLLTMPSRSMLVIEDIDCSVKLQNRESSEV 317
+ + +L + A + F + ++ I+++D K +R S
Sbjct: 230 EAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGK--SRASGAF 287
Query: 318 QATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
N E + TL+ LL +DG +S G I++ TN E LDPALLRPGR D +
Sbjct: 288 MGGNDEREQ-TLNQLLTEMDG-FSAAGATVIVLAATNRPETLDPALLRPGRFDRQV 341
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 212 ALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQ----- 266
LD ++ REI E +E + E + ++G +G LLYGPPGTGK+ L A+AN
Sbjct: 183 GLDEQI-REIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATF 241
Query: 267 LKFDIYDLDLSAVQSNSEL---RFLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQE 323
++ +L + + L F L + S++ I++ID + R+++ +
Sbjct: 242 IRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDAT----SGDR 297
Query: 324 ENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLHMSYCN 379
E + TL+ LL +DG + + ++I TN K+ LDPALLRPGR D H+ + +
Sbjct: 298 EVQRTLTQLLAEMDG-FDPLDDIKVIA-ATNRKDILDPALLRPGRFDRHIKIPLPD 351
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 16/177 (9%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
+TF +A E K+E+ E + +F+ + Y R+G +G LL GPPGTGK+ L A+A
Sbjct: 194 VTFDDVAGIEEAKQELAE-IVDFLKNPQKYQRLGGTIPKGVLLIGPPGTGKTLLARAVAG 252
Query: 266 QLKFDIYDLDLS---------AVQSNSELRFLLLTMPSRSMLVIEDIDCSVKLQNRESSE 316
+ + + S EL F + ++ ++++D + R S
Sbjct: 253 EAGVPFFSMSGSEFVEMIVGVGAARVREL-FQQAKKEAPCIIFVDELDA---IGRRRGSS 308
Query: 317 VQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
+ +E + TL+ LL +DG S +G I++ TN + LDPALLRPGR D +
Sbjct: 309 INVGGHDEREQTLNQLLVEMDGFDSR--QGVIVLAATNRPDVLDPALLRPGRFDRRV 363
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
+TFK +A E K + E + +F++ Y IG +G LL GPPGTGK+ L A+A
Sbjct: 163 ITFKDVAGQDEAKESLVE-IVDFLHDTRKYVEIGAKLPKGALLVGPPGTGKTLLAKAVAG 221
Query: 266 QLKFDIYDL------DLSAVQSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRESSEV 317
+ K + + ++ + +R L ++ ++ I++ID K ++ +
Sbjct: 222 EAKVPFFSMSGSDFVEMFVGMGAARVRDLFKQAEEKAPCIVFIDEIDAIGKSRD---GAI 278
Query: 318 QATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
Q ++ E TL+ LL +DG S +G +I+ TN E LD ALLRPGR D +
Sbjct: 279 QGNDEREQ--TLNQLLTEMDGFDSS--KGVVILAATNRPEVLDKALLRPGRFDRRI 330
>sp|B0K657|FTSH2_THEPX ATP-dependent zinc metalloprotease FtsH 2 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH2 PE=3 SV=1
Length = 510
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 203 KHPMTFKTLA-LDSELKREITEDLE---NFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSS 258
K +TFK +A LD E+ ++L+ +FM E Y ++G +G L YGPPGTGK+
Sbjct: 78 KTNITFKDVAGLD-----EVIDELKVIIDFMTNTEKYNKMGAKIPKGILFYGPPGTGKTL 132
Query: 259 LIAAMANQLKFDIYDLDLSAVQSN------SELRFLLLTM--PSRSMLVIEDIDCSVKLQ 310
L A+A + S S +R L + S++ I++ID +
Sbjct: 133 LATALAGETNSTFISASGSEFVEKYVGVGASRIRALFAKAKKSAPSIIFIDEIDAVGTKR 192
Query: 311 NRESSEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMD 370
N + N E TL+ LL +DG S EG I++ TN + LD ALLRPGR D
Sbjct: 193 NTD-------NNSEKDQTLNQLLVEMDGFNS--NEGIIVIGATNRIDMLDEALLRPGRFD 243
Query: 371 MHLHMSYCN 379
+H+ N
Sbjct: 244 RTIHIGAPN 252
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 203 KHPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAA 262
K FK +A E K+E+ E +E F+ ++ IG +G LL GPPGTGK+ L A
Sbjct: 160 KKKAKFKDVAGADEEKQELVEVVE-FLKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARA 218
Query: 263 MANQLKFDIYDLDLS------AVQSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRES 314
+A + + + S S +R L + ++ I++ID R+
Sbjct: 219 VAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAV----GRQR 274
Query: 315 SEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLH 374
+E + TL+ LL +DG EG II+ TN + LDPALLRPGR D +
Sbjct: 275 GAGLGGGHDEREQTLNQLLVEMDGF--SANEGIIIIAATNRADILDPALLRPGRFDRQIQ 332
Query: 375 MSYCNTS 381
++ + +
Sbjct: 333 VNRPDVN 339
>sp|Q3B6R3|FTSH_PELLD ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon luteolum
(strain DSM 273) GN=ftsH PE=3 SV=1
Length = 706
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 14/176 (7%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
+TFK +A E K E+ E + +F+ + YTR+G +G LL GPPGTGK+ L A+A
Sbjct: 196 ITFKDVAGLDEAKAEVME-VVDFLKDPKKYTRLGGKLPKGVLLVGPPGTGKTLLAKAVAG 254
Query: 266 QLKFDIYDLDLS------AVQSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRESSEV 317
+ + + S + +R L ++ ++ I++ID +V + + +
Sbjct: 255 EADVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEID-AVGRSRGKGAMM 313
Query: 318 QATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
++ EN TL+ LL +DG +G I++ TN + LDPALLRPGR D +
Sbjct: 314 GGNDEREN--TLNQLLVEMDGF--ATDKGVILMAATNRPDVLDPALLRPGRFDRQI 365
>sp|Q67LC0|FTSH1_SYMTH ATP-dependent zinc metalloprotease FtsH 1 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH1 PE=3 SV=1
Length = 594
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 15/189 (7%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
+T + +A E+K E+ E + +F+ E Y +G RG LL GPPGTGK+ L A+A
Sbjct: 143 VTLQDVAGLDEVKAELQEVI-DFLREPERYRAMGARIPRGILLSGPPGTGKTLLARALAG 201
Query: 266 QLKFDIYD------LDLSAVQSNSELRFLL--LTMPSRSMLVIEDIDCSVKLQNRESSEV 317
+ + ++L A + +R L + ++ I++ID +
Sbjct: 202 EAGVPFFSASGSDFVELFAGTGAARVRALFDRARKAAPCIVFIDEIDALAR----RRGVG 257
Query: 318 QATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLHMSY 377
EE + T++ LL +DG S GEG I+V TN + LDPA+LRPGR D HL +
Sbjct: 258 AGGGTEEREQTINQLLVEMDGFDS--GEGVIVVAATNRPDVLDPAVLRPGRFDRHLTVDP 315
Query: 378 CNTSVFKQL 386
+ +Q+
Sbjct: 316 PDRKGREQI 324
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 19/188 (10%)
Query: 194 RWDANNIVLKHPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPG 253
R++A + V+ TF +A +K ++ E + +F+ E + ++G +G LL GPPG
Sbjct: 186 RFEATDKVI----TFNDVAGLEGVKADLQE-IVDFLKTPEKFQKLGGQVPKGVLLNGPPG 240
Query: 254 TGKSSLIAAMANQLKFDIYDLDLSA-VQ-----SNSELRFLLLTMP--SRSMLVIEDIDC 305
TGK+ L A+A + + ++ S +Q S +R L T S S++ I++ID
Sbjct: 241 TGKTLLARAVAGEADVPFFSVNGSEFIQMFVGVGASRVRDLFKTAKEQSPSIIFIDEIDA 300
Query: 306 SVKLQNRESSEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLR 365
R+ +E + TL+ +L +DG + I++ TN + LDPALLR
Sbjct: 301 V----GRQRGAGLGGGHDEREQTLNQILGEMDGFGGA--QAVIVIAATNRPDVLDPALLR 354
Query: 366 PGRMDMHL 373
PGR D H+
Sbjct: 355 PGRFDRHV 362
>sp|O17071|PRS10_CAEEL Probable 26S protease regulatory subunit 10B OS=Caenorhabditis
elegans GN=rpt-4 PE=1 SV=2
Length = 406
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 16/174 (9%)
Query: 215 SELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDL 274
+E RE+ E +E + E + R+G +G LL+GPPGTGK+ L A+A+QL + +
Sbjct: 156 AEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKV 215
Query: 275 DLSAV------QSNSELR--FLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENK 326
SA+ +S +R F ++ +++ID + R SE + ++E +
Sbjct: 216 VSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDA---IGGRRFSEGTSADREIQR 272
Query: 327 VTLSGLLNFIDGLWSCCGEGRI-IVFTTNHKEKLDPALLRPGRMDMHLHMSYCN 379
TL LLN +DG S G++ ++ TN + LDPALLRPGR+D + + N
Sbjct: 273 -TLMELLNQLDGFDSL---GKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPN 322
>sp|Q9ZM66|FTSH_HELPJ ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain J99) GN=ftsH PE=3 SV=1
Length = 632
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 203 KHPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAA 262
K + F +A + E K E+ E + +F+ E Y +G +G LL GPPGTGK+ L A
Sbjct: 164 KPNVRFNDMAGNEEAKEEVVE-IVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKA 222
Query: 263 MANQLKFDIYDLDLSAV------QSNSELRFLLLTMPSR--SMLVIEDIDCSVKLQNRES 314
+A + + + S+ S +R L T + S++ I++ID K +R +
Sbjct: 223 VAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGK--SRAA 280
Query: 315 SEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
+ + N E + TL+ LL +DG S I++ TN E LDPAL+RPGR D +
Sbjct: 281 GGMISGNDEREQ-TLNQLLAEMDGFGSENAP-VIVLAATNRPEILDPALMRPGRFDRQV 337
>sp|D1BLD0|FTSH_VEIPT ATP-dependent zinc metalloprotease FtsH OS=Veillonella parvula
(strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) GN=ftsH
PE=3 SV=1
Length = 642
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
++FK +A E K+E+ E +E F+ +T IG +G LL GPPGTGK+ L A+A
Sbjct: 151 VSFKDVAGAEEAKQELEEVVE-FLKDPGKFTTIGAKIPKGVLLAGPPGTGKTLLAKAVAG 209
Query: 266 QLKFDIYDLDLS------AVQSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRESSEV 317
+ + + S S +R L + ++ I++ID R+
Sbjct: 210 EAGVPFFTISGSDFVEMFVGVGASRVRDLFTQAKKNAPCIIFIDEIDAV----GRQRGAG 265
Query: 318 QATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
+E + TL+ LL +DG EG I + TN + LDPALLRPGR D +
Sbjct: 266 LGGGHDEREQTLNQLLVEMDGF--GANEGIITIAATNRPDILDPALLRPGRFDRQV 319
>sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A OS=Arabidopsis
thaliana GN=RPT4A PE=2 SV=1
Length = 399
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 219 REITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDLDLSA 278
RE+ E +E + E + R+G +G LLYGPPGTGK+ L A+A+ + + + SA
Sbjct: 149 RELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSA 208
Query: 279 V------QSNSELR--FLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVTLS 330
+ +S +R F ++ +++ID + R SE + ++E + TL
Sbjct: 209 IIDKYIGESARLIREMFNYAREHQPCIIFMDEIDA---IGGRRFSEGTSADREIQR-TLM 264
Query: 331 GLLNFIDGLWSCCGEGRI-IVFTTNHKEKLDPALLRPGRMDMHLHMSYCN-TSVFKQLAF 388
LLN +DG + G++ ++ TN + LDPALLRPGR+D + + N S L
Sbjct: 265 ELLNQLDGFDNL---GKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKI 321
Query: 389 NYLGISHH 396
+ GI+ H
Sbjct: 322 HAAGIAKH 329
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 20/235 (8%)
Query: 212 ALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDI 271
L S+LK I E +E + E + G RG LLYGPPGTGK+ + A+AN++ +
Sbjct: 357 GLSSQLK-AIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYV 415
Query: 272 YDLDLSAV------QSNSELR--FLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQE 323
++ + ++ ++LR F T+ S++ I+++D RE A N+
Sbjct: 416 SVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCP--KREG----AQNEV 469
Query: 324 ENKVTLSGLLNFIDGLWSCCGEGRIIVF-TTNHKEKLDPALLRPGRMDMHLHMSYCNTSV 382
E +V S LL +DG+ S EG+++V TN LD AL RPGR D + + N
Sbjct: 470 EKRVVAS-LLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQD 528
Query: 383 FKQLAFNYLGISHHYLFEQIEELIKEVNVTPAEVAGELMKSTNAEVSLNGLVKFL 437
+ L H L E EL++ N V +L N E L L + L
Sbjct: 529 RLDILQKLLRRVPHLLTEA--ELLQLANSAHGYVGADLKVLCN-EAGLCALRRIL 580
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 217 LKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDLDL 276
+K ++ + +E + E + R+G +G LLYGPPG K+ + A+AN+ + +
Sbjct: 635 IKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKG 694
Query: 277 SAV------QSNSELR--FLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVT 328
+ +S +R F + S++ +++D L S + A N +
Sbjct: 695 PELMNKYVGESERAVRETFRKARAVAPSIIFFDELDA---LAVERGSSLGAGNVADR--V 749
Query: 329 LSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLHMSYCNTS----VFK 384
L+ LL +DG+ + I+ TN +++D AL+RPGR+D +++ + + +FK
Sbjct: 750 LAQLLTEMDGIEQL--KDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFK 807
Query: 385 QLAFNYLGISHHYLFEQIEELI 406
L F+ + +S+ ++ELI
Sbjct: 808 -LQFHSMPVSNEV---DLDELI 825
>sp|O32617|FTSH_HELFC ATP-dependent zinc metalloprotease FtsH OS=Helicobacter felis
(strain ATCC 49179 / NCTC 12436 / CS1) GN=ftsH PE=3 SV=1
Length = 638
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 203 KHPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAA 262
K + F +A + E K E+ E + +F+ + Y +G +G LL GPPGTGK+ L A
Sbjct: 170 KPKVRFNDMAGNEEAKEEVVE-IVDFLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKA 228
Query: 263 MANQLKFDIYDLDLSAV------QSNSELR--FLLLTMPSRSMLVIEDIDCSVKLQNRES 314
+A + + + S+ S +R F + + S++ I++ID K +R +
Sbjct: 229 VAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGK--SRAA 286
Query: 315 SEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
+ + N E + TL+ LL +DG S I++ TN E LDPALLRPGR D +
Sbjct: 287 GGMISGNDEREQ-TLNQLLAEMDGFGSENAP-VIVLAATNRPEILDPALLRPGRFDRQV 343
>sp|Q9MAK9|PS10B_ARATH 26S protease regulatory subunit S10B homolog B OS=Arabidopsis
thaliana GN=RPT4B PE=2 SV=1
Length = 399
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 219 REITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMANQLKFDIYDLDLSA 278
RE+ E +E + E + R+G +G LLYGPPGTGK+ L A+A+ + + + SA
Sbjct: 149 RELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSA 208
Query: 279 V------QSNSELR--FLLLTMPSRSMLVIEDIDCSVKLQNRESSEVQATNQEENKVTLS 330
+ +S +R F ++ +++ID + R SE + ++E + TL
Sbjct: 209 IIDKYIGESARLIREMFNYAREHQPCIIFMDEIDA---IGGRRFSEGTSADREIQR-TLM 264
Query: 331 GLLNFIDGLWSCCGEGRI-IVFTTNHKEKLDPALLRPGRMDMHLHMSYCN-TSVFKQLAF 388
LLN +DG G++ ++ TN + LDPALLRPGR+D + + N S + L
Sbjct: 265 ELLNQLDGFDQL---GKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKI 321
Query: 389 NYLGISHH 396
+ GI+ H
Sbjct: 322 HASGIAKH 329
>sp|A6TWP7|FTSH2_ALKMQ ATP-dependent zinc metalloprotease FtsH 2 OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ftsH2 PE=3 SV=1
Length = 689
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
+TF +A E K E+ E+L +F+ + Y +G +G L+ GPPGTGK+ L A+A
Sbjct: 162 ITFDDVAGLDEEKAEV-EELVDFLKNPKKYIELGARIPKGILMIGPPGTGKTYLTKAVAG 220
Query: 266 QLKF--------DIYDLDLSAVQSNSELRFLLLTMPSRSMLVIEDIDCSVKLQNRESSEV 317
+ D ++ + S F + ++ I++ID R+
Sbjct: 221 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKSAPCIIFIDEIDAV----GRKRGAG 276
Query: 318 QATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHLHMSY 377
+E + TL+ LL +DG EG IIV TN + LDPALLRPGR D + +
Sbjct: 277 LGGGHDEREQTLNQLLVEMDGF--GINEGIIIVAATNRPDILDPALLRPGRFDRQVMVGA 334
Query: 378 CNTSVFKQL 386
+ +Q+
Sbjct: 335 PDIKGREQI 343
>sp|A8ZNZ4|FTSH_ACAM1 ATP-dependent zinc metalloprotease FtsH OS=Acaryochloris marina
(strain MBIC 11017) GN=ftsH PE=3 SV=1
Length = 655
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 206 MTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSLIAAMAN 265
+TF +A E K E+ E + +F+ + YTR+G +G LL GPPGTGK+ L A+A
Sbjct: 173 VTFDDVAGVEEAKTELLE-IVDFLAHADKYTRLGAKIPKGVLLVGPPGTGKTLLAKAIAG 231
Query: 266 QLKFDIYD------LDLSAVQSNSELRFLLLTMPSRS--MLVIEDIDCSVKLQNRESSEV 317
+ K + ++L + +R L ++ ++ I+++D K R
Sbjct: 232 EAKVPFFSISGSEFIELFVGIGAARVRDLFEQAKQQAPCIVFIDELDALGK--ARGGPGG 289
Query: 318 QATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
+E + TL+ LL+ +DG G I++ TN E LDPALLRPGR D +
Sbjct: 290 FTGGNDEREQTLNQLLSEMDGFDPNV--GVILLAATNRPEVLDPALLRPGRFDRQI 343
>sp|B3QZS3|FTSH2_PHYMT ATP-dependent zinc metalloprotease FtsH 2 OS=Phytoplasma mali
(strain AT) GN=ftsH2 PE=3 SV=1
Length = 686
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 90/183 (49%), Gaps = 12/183 (6%)
Query: 200 IVLKHPMTFKTLALDSELKREITEDLENFMNGKEYYTRIGRAWKRGYLLYGPPGTGKSSL 259
+V + TFK +A E K E++E L NF+ Y +G +G LLYGPPG GK+ L
Sbjct: 223 LVNQQEFTFKDIAGADEEKEEMSE-LINFLKNPFKYEAMGARIPKGVLLYGPPGVGKTLL 281
Query: 260 IAAMANQLK---FDIYDLDLSAVQ---SNSELRFLLLTMPSRSMLVIEDIDCSVKLQNRE 313
A+A + K F + D V S +R L + +I ID ++ + +
Sbjct: 282 AKAVAGEAKVPFFAVSGSDFIEVYVGLGASRIRKLFNEAKQNAPCIIF-ID-EIETISHQ 339
Query: 314 SSEVQATNQEENKVTLSGLLNFIDGLWSCCGEGRIIVFTTNHKEKLDPALLRPGRMDMHL 373
V +N E ++ TL+ LL +DG G I++ TN E LD A+ RPGR D H
Sbjct: 340 RGSVNYSNSEHDQ-TLNQLLVEMDGFTKNI--GVIVMAATNQPESLDLAVTRPGRFDRHF 396
Query: 374 HMS 376
H++
Sbjct: 397 HIT 399
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,228,701
Number of Sequences: 539616
Number of extensions: 6241916
Number of successful extensions: 28187
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 26044
Number of HSP's gapped (non-prelim): 1772
length of query: 449
length of database: 191,569,459
effective HSP length: 121
effective length of query: 328
effective length of database: 126,275,923
effective search space: 41418502744
effective search space used: 41418502744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)