BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013130
(449 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255585350|ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 530
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/451 (75%), Positives = 389/451 (86%), Gaps = 10/451 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+P SLS+R+C+EYLVDM LQCL PT+QPRV+DH+EQIKDMITQIINN
Sbjct: 78 KIIKRANESGEDPFSLSSRFCEEYLVDMDSLQCLRPTHQPRVTDHIEQIKDMITQIINNG 137
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDVFFAV+K PNYG+LSGQ+LEN+RAGER D+RKRNPADFALWKAAK GEPS
Sbjct: 138 FAYPSEGDVFFAVDKFPNYGQLSGQKLENHRAGERNP-DTRKRNPADFALWKAAKPGEPS 196
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMSA YL+ KFDIHGGG DLIFPHHENEI QS AACQ+SNVSY
Sbjct: 197 WESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGSDLIFPHHENEITQSAAACQESNVSY 256
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNGHVTNNNEKMSKSLGN+FTIR++TERYHPLA+RHFLISAHYRSPLNY+V QL+SAS
Sbjct: 257 WIHNGHVTNNNEKMSKSLGNYFTIREVTERYHPLAVRHFLISAHYRSPLNYTVFQLESAS 316
Query: 242 DAVFYIYQTLQDCEVALSPFQ---------EHGKTARINPAAEDCINKLRDEFHARMSDD 292
DA+FYIYQTLQDCE ALS FQ ++ K I A+ CINKLRDEF +MSDD
Sbjct: 317 DAIFYIYQTLQDCEDALSMFQDGSLKEGAAQNSKVVGITADAKKCINKLRDEFETKMSDD 376
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
L+TSHILTGAFQDALKFINSS++MLKKK K QQLSLI+SL +IE E+K VL ILGLLPP
Sbjct: 377 LSTSHILTGAFQDALKFINSSISMLKKKLQKPQQLSLIQSLTEIEREIKLVLNILGLLPP 436
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
G Y+E+LQQLKDKALKRA +TE+DVL+ IEERA ARKNK+FS+SDQ+RA+L KGIALMD
Sbjct: 437 GTYAEILQQLKDKALKRAGVTEDDVLRSIEERAQARKNKEFSRSDQVRANLAAKGIALMD 496
Query: 413 MGKETIWRPCVLVEQEQEAPPAEKEKKPAAT 443
+GKET+WRPCV VEQEQEA K++ P T
Sbjct: 497 VGKETVWRPCVPVEQEQEAVSVVKDQNPPPT 527
>gi|359475690|ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/434 (78%), Positives = 387/434 (89%), Gaps = 1/434 (0%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+LGENPL+LS+R+CQEYL DM DLQCL PT QPRVSDHM+QIKDMITQIINND
Sbjct: 78 KIIRRANELGENPLTLSSRFCQEYLDDMTDLQCLTPTQQPRVSDHMDQIKDMITQIINND 137
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAY+++GDV+FAV+KSPNYGRLSG++LE+NRAGERVAVDSRKRNPADFALWKAAK EPS
Sbjct: 138 CAYIIDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAVDSRKRNPADFALWKAAKPDEPS 197
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSAHYL+ KFDIHGGGIDLIFPHHENEIAQSCAACQ+SNVSY
Sbjct: 198 WDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQSCAACQESNVSY 257
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNGHVTNNNEKMSKSLGNFFTIRQIT+ YHPLALR+FL+ HYRSP+NYS+ QL+ AS
Sbjct: 258 WMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHPLALRYFLLGTHYRSPVNYSIAQLEIAS 317
Query: 242 DAVFYIYQTLQDCEVALSPFQE-HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+AVFYIYQTL+DCE LSPFQE +G+ I PAA+DCI+KL+ +F +MSDDL+T HIL
Sbjct: 318 EAVFYIYQTLRDCEDTLSPFQEVNGQNVCITPAAKDCISKLQTDFQTKMSDDLSTPHILN 377
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
+ Q+AL+FINS LNMLKKKQ KQQQLS ++SL ++E EVK VL +LGLL AYSEVLQ
Sbjct: 378 ASLQEALRFINSGLNMLKKKQQKQQQLSAVQSLTELEKEVKGVLSVLGLLSTLAYSEVLQ 437
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
QLK KAL+RA + E+DVL LIEERA ARKNK+FS+ DQIRADL KGIALMD+GKETIWR
Sbjct: 438 QLKGKALRRAGMIEDDVLHLIEERALARKNKNFSRGDQIRADLASKGIALMDVGKETIWR 497
Query: 421 PCVLVEQEQEAPPA 434
PCV VEQE +AP A
Sbjct: 498 PCVPVEQEPQAPAA 511
>gi|224111652|ref|XP_002315932.1| predicted protein [Populus trichocarpa]
gi|222864972|gb|EEF02103.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/448 (76%), Positives = 389/448 (86%), Gaps = 9/448 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN++GE+PLSLS+R+C+EYLVDM DLQCL PT+QPRV+DH+EQIKDMITQII D
Sbjct: 78 KIIRRANEIGEDPLSLSSRFCEEYLVDMTDLQCLIPTHQPRVTDHVEQIKDMITQIIEKD 137
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAY VEGDVFFAV KSPNYG+LSGQRLENNRAGERVAVDSRKRNPADFALWKAAK GEPS
Sbjct: 138 CAYAVEGDVFFAVNKSPNYGQLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKPGEPS 197
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMSA YL+ KFDIHGGGIDLIFPHHENEIAQSCAAC++S+VSY
Sbjct: 198 WESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGIDLIFPHHENEIAQSCAACEESSVSY 257
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSV QL+S+S
Sbjct: 258 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVSQLESSS 317
Query: 242 DAVFYIYQTLQDCEVALSPFQEH------GKTAR---INPAAEDCINKLRDEFHARMSDD 292
DAVFYIYQTLQDCE AL PFQE G+ A I A+ CI++L ++F +MSDD
Sbjct: 318 DAVFYIYQTLQDCEDALLPFQEGSLKEGAGQNANLVAITADAQKCISRLHEDFETKMSDD 377
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
LNTS +LTGAFQ+ALK +N SL MLKKKQ K+QQLSLI S+ +++ EV EVLRILGL PP
Sbjct: 378 LNTSPLLTGAFQEALKVVNGSLGMLKKKQQKKQQLSLIRSVTEVKKEVTEVLRILGLFPP 437
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+EVLQQLK KALKRA LTE+DV+ LIE+RA ARK++DF KSDQIR DL+ +GIALMD
Sbjct: 438 CTCAEVLQQLKGKALKRAGLTEDDVMSLIEDRAVARKSQDFKKSDQIRTDLSARGIALMD 497
Query: 413 MGKETIWRPCVLVEQEQEAPPAEKEKKP 440
+GKET+WRPCV VE E++A +E P
Sbjct: 498 VGKETVWRPCVPVENEEKAKTVVEEPTP 525
>gi|359496172|ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/434 (78%), Positives = 382/434 (88%), Gaps = 1/434 (0%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+LGENPL+LS+ +CQEYL DM DL CL PT+QPRVSDHM+QIKDMITQIINND
Sbjct: 78 KIIRRANELGENPLTLSSHFCQEYLDDMTDLHCLSPTHQPRVSDHMDQIKDMITQIINND 137
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAY ++GDV+FAV+KSPNYGRLSG++LENNRAGERVAVDSRKRNPADFALWKAAK GEPS
Sbjct: 138 CAYTIDGDVYFAVDKSPNYGRLSGRKLENNRAGERVAVDSRKRNPADFALWKAAKPGEPS 197
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSAHYL+ KFDIHGGGIDLIFPHHENEIAQSCAACQ+SNVSY
Sbjct: 198 WDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQSCAACQESNVSY 257
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNGHVTNNNEKMSKSLGNFFTIRQIT+ YHPLALR+FL+ HYRSP+NYS+ QL+ AS
Sbjct: 258 WMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHPLALRYFLLGTHYRSPVNYSIAQLEIAS 317
Query: 242 DAVFYIYQTLQDCEVALSPFQE-HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+AVFYIYQTL+DCE LS FQE +G+ I PAA+DCI L+ +F +MSDDL+T HIL
Sbjct: 318 EAVFYIYQTLRDCEDTLSLFQEVNGRNVCIAPAAQDCIRTLQTDFQTKMSDDLSTPHILN 377
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
+ Q+AL+FINS LNMLKKKQ KQQQLS +ESL K+ EVK VL +LGLL AYSEVLQ
Sbjct: 378 ASLQEALRFINSCLNMLKKKQQKQQQLSAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQ 437
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
QLK KALKRA + E+DVL LIEERA ARKNKDFSK DQIRADL KGIALMD+GKETIWR
Sbjct: 438 QLKGKALKRAGMIEDDVLHLIEERALARKNKDFSKGDQIRADLASKGIALMDVGKETIWR 497
Query: 421 PCVLVEQEQEAPPA 434
PCV V+QE +AP +
Sbjct: 498 PCVPVQQEPQAPAS 511
>gi|449464950|ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/456 (74%), Positives = 385/456 (84%), Gaps = 13/456 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ GENP +LS+R+CQEYL DMADLQCL PT+QPRVSDH+EQIKDMITQII N
Sbjct: 77 KIIRRANESGENPFALSDRFCQEYLSDMADLQCLSPTHQPRVSDHLEQIKDMITQIIKNG 136
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
Y V+GDVFF+V+K PNYG+LSGQ+LEN+RAGERVAVDSRK NPADFALWKAAK GEPS
Sbjct: 137 YGYAVDGDVFFSVDKFPNYGQLSGQKLENHRAGERVAVDSRKNNPADFALWKAAKPGEPS 196
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMSAHYL+ KFDIHGGGIDLIFPHHENE+AQSCAACQ+S +SY
Sbjct: 197 WESPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEVAQSCAACQESKISY 256
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL LRHFLISAHYRSPLNY+V QLDSAS
Sbjct: 257 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLVLRHFLISAHYRSPLNYTVSQLDSAS 316
Query: 242 DAVFYIYQTLQDCEVALSPFQEH------GKTARINP---AAEDCINKLRDEFHARMSDD 292
D V+YIYQT+QDCE ALS Q GKT + +P AAE+CI LR EF RM+DD
Sbjct: 317 DTVYYIYQTMQDCEDALSQHQGENLSDGLGKTGKKDPVSSAAEECIINLRSEFQTRMADD 376
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
LNT+HILTGAFQ+ALKFINS+L LKKKQPK+QQLS+I+SL ++ E++EVL +LGLL
Sbjct: 377 LNTAHILTGAFQEALKFINSTLTSLKKKQPKKQQLSMIQSLVNVKKELREVLDVLGLLST 436
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
YSEVLQQLKDKALKRA + E+D+L LIEER ARK+K+F KSD IRA L+ GIALMD
Sbjct: 437 STYSEVLQQLKDKALKRAGMVEDDILHLIEERTQARKDKNFGKSDNIRAKLSSLGIALMD 496
Query: 413 MGKETIWRPCVLVEQEQEAPPAEKEKKPAATGEEQK 448
+G+ETIWRPCV VE PP E++ AT EQK
Sbjct: 497 VGRETIWRPCVPVEPAVLVPPGEQK----ATQAEQK 528
>gi|356575566|ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 553
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/458 (68%), Positives = 378/458 (82%), Gaps = 13/458 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+PL LSNR+C EY DMADLQC P+ +PRVS+H+ +IKDMITQII+N
Sbjct: 79 KIIKRANETGEDPLMLSNRFCDEYNADMADLQCKTPSKEPRVSEHLNEIKDMITQIISNG 138
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDVF+AV+K PNYG LSGQRLE+NRAGERVAVDSRKR+PADFALWKAAK GEPS
Sbjct: 139 YAYEVDGDVFYAVDKCPNYGMLSGQRLEHNRAGERVAVDSRKRHPADFALWKAAKPGEPS 198
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSA YL+ KFDIHGGGIDLIFPHHENEIAQS AA +S+VSY
Sbjct: 199 WDSPWGPGRPGWHIECSAMSACYLTHKFDIHGGGIDLIFPHHENEIAQSWAADHESHVSY 258
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYS+ QL+++S
Sbjct: 259 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSISQLENSS 318
Query: 242 DAVFYIYQTLQDCEVALSPF-----QEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
DA++YI+QTLQDC+ A+SP +++ K +IN AA++CI KL EF +MSDDL T
Sbjct: 319 DAIYYIFQTLQDCKDAVSPLLQGETEKNEKVPQINEAAKECIKKLNVEFQTKMSDDLQTP 378
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
ILTGA Q+ALKF+N+SL MLKKK K+ QL LI+SL ++E EV +VL +LGLL +Y+
Sbjct: 379 VILTGALQEALKFVNTSLKMLKKKMQKRAQLQLIQSLLEVEKEVGKVLDVLGLLSSKSYA 438
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
EVL QLKDKAL RA LTE++VL LIEER AR NKDF+KSD++RADL KGIALMD+G E
Sbjct: 439 EVLHQLKDKALNRAGLTEDEVLHLIEERTQARINKDFAKSDKMRADLATKGIALMDVGNE 498
Query: 417 TIWRPCV--------LVEQEQEAPPAEKEKKPAATGEE 446
IWRPC+ +V ++Q AP E+++ ++ ++
Sbjct: 499 IIWRPCIPSEPLVAEVVHRDQRAPTVEEKQSSSSVNQK 536
>gi|356536300|ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 548
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 315/453 (69%), Positives = 371/453 (81%), Gaps = 18/453 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+PL LSNR+C EY DMADLQC P+ +PRVS+H+ +IKDMITQIINN
Sbjct: 79 KIIKRANETGEDPLMLSNRFCDEYNADMADLQCETPSREPRVSEHLNEIKDMITQIINNG 138
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDVF+AV+K PNYG LSGQRLE+NRAGERVAVDSRKR+PADFALWKAAK GEPS
Sbjct: 139 YAYEVDGDVFYAVDKCPNYGMLSGQRLEHNRAGERVAVDSRKRHPADFALWKAAKPGEPS 198
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSA YL+ KFDIHGGGIDLIFPHHENEIAQS AA DS+VSY
Sbjct: 199 WDSPWGPGRPGWHIECSAMSACYLTHKFDIHGGGIDLIFPHHENEIAQSWAADHDSHVSY 258
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNGHVTNNNEKMSKSLGNFFTIRQITERYH LALRHFLISAHYRSPLNYS+ QL+++S
Sbjct: 259 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHSLALRHFLISAHYRSPLNYSISQLENSS 318
Query: 242 DAVFYIYQTLQDCEVALSPF-----QEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
DA++YI+QTLQDC+ A+SP +++ K +IN AA++CI KL EF +MSDDL T
Sbjct: 319 DAIYYIFQTLQDCKDAVSPLLQGETEKNEKVPQINEAAKECIKKLNVEFQTKMSDDLQTP 378
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
ILTGA Q+ALKF+N+SL MLKKK K+ QL LI+SL ++E V +VL +LGLL +Y+
Sbjct: 379 VILTGALQEALKFVNTSLKMLKKKMQKRAQLQLIQSLLEVEKVVGKVLDVLGLLSSKSYA 438
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
EVLQQLKDKALKRA LTE++VL LI+ER AR NKDF+KSD++RADL KGIALMD+G E
Sbjct: 439 EVLQQLKDKALKRAGLTEDEVLHLIDERTQARINKDFAKSDKMRADLATKGIALMDVGNE 498
Query: 417 TIWRPCV-------------LVEQEQEAPPAEK 436
WRPC+ +VE++Q P +K
Sbjct: 499 ITWRPCIPSEPLVAEVVQRPIVEEKQSTPVNQK 531
>gi|357444709|ref|XP_003592632.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355481680|gb|AES62883.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 552
Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust.
Identities = 308/427 (72%), Positives = 358/427 (83%), Gaps = 5/427 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ G +P LS +C EY VDM+DL C PT +PRVSDH++QIKDMITQIINND
Sbjct: 87 KIINRANEKGVDPFELSRHFCDEYNVDMSDLLCERPTKEPRVSDHIDQIKDMITQIINND 146
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDVF++VEK PNYG LSGQRLE+NRAGERVAVDSRK +PADFALWKAAK GEPS
Sbjct: 147 YAYEVNGDVFYSVEKCPNYGALSGQRLEHNRAGERVAVDSRKHHPADFALWKAAKPGEPS 206
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSA YLS KFDIHGGGIDLIFPHHENEIAQS AA ++S++SY
Sbjct: 207 WDSPWGPGRPGWHIECSAMSACYLSHKFDIHGGGIDLIFPHHENEIAQSWAADKESHISY 266
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYS+ QL+++S
Sbjct: 267 WLHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSITQLETSS 326
Query: 242 DAVFYIYQTLQDCEVALSPF-----QEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
DA++YI+QTL+DC LS F ++ K IN AA++CI KL+DEF +MSDDL T
Sbjct: 327 DAIYYIFQTLEDCRDTLSSFLQEDTEKKEKVPPINDAAKECIKKLKDEFQTKMSDDLQTP 386
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
ILTGA Q+ALKF+N SL MLKKK K+ QL L++SL ++E E +E+L++LGLL +Y+
Sbjct: 387 VILTGALQEALKFMNGSLKMLKKKMQKRAQLQLVQSLLEVEKEAREILKVLGLLSSLSYA 446
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
EVLQQLKDKALKRA LTE +VL+ IEER AR NKDF+KSD +R DLT KGIALMD+G E
Sbjct: 447 EVLQQLKDKALKRAGLTEVEVLKSIEERRQARINKDFAKSDNVRTDLTAKGIALMDVGNE 506
Query: 417 TIWRPCV 423
TIWRPC+
Sbjct: 507 TIWRPCI 513
>gi|15241557|ref|NP_198699.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|192807340|gb|ACF06122.1| At5g38830 [Arabidopsis thaliana]
gi|332006981|gb|AED94364.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 511
Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust.
Identities = 291/425 (68%), Positives = 350/425 (82%), Gaps = 5/425 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN GE+PL LSNR+C EYLVDM LQCLPPT+QPRVS+HM+ I MI +II D
Sbjct: 79 KIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQPRVSEHMDNIIKMIEKIIEKD 138
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
C YVVEGDVFF+V+KSPNYG+LSGQ LE+ RAGERVAVDSRKRNPADFALWKAAK EPS
Sbjct: 139 CGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPADFALWKAAKPDEPS 198
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMS HYLS KFDIHGGG DL FPHHENEIAQ+CAAC+DS V+Y
Sbjct: 199 WESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFPHHENEIAQTCAACEDSGVNY 258
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNGHVT NNEKM+KS NF TIR+IT YHPLALRHFL+SA YRSPL+++ QL+S+S
Sbjct: 259 WLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFLMSAQYRSPLSFTASQLESSS 318
Query: 242 DAVFYIYQTLQDCEVALSPFQ----EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
+A++Y+YQTLQD + LSP+Q E G + +D I KL+ EF ++M DDLNT+H
Sbjct: 319 EALYYVYQTLQDLDEGLSPYQDALSEDGGKSEQTAEGKDIIKKLKTEFESKMLDDLNTAH 378
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
ILTGA+QDALKFIN+SL+ LKK Q K+Q++S++ SL +IE +EVL +LGLL +Y+E
Sbjct: 379 ILTGAYQDALKFINASLSKLKKMQ-KKQRMSMLVSLVEIEKAAREVLDVLGLLTTLSYAE 437
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+L+++K K L RAE+ EE + QLIEER ARKNKDF+KSD+IR LTRKGIALMD+GKET
Sbjct: 438 ILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEIREKLTRKGIALMDIGKET 497
Query: 418 IWRPC 422
+WRPC
Sbjct: 498 VWRPC 502
>gi|297801734|ref|XP_002868751.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314587|gb|EFH45010.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 291/425 (68%), Positives = 351/425 (82%), Gaps = 5/425 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+PL LSNR+C+EYLVDM LQCL PT+QPRVS+HM+ I MI +II D
Sbjct: 79 KIIIRANENGEDPLDLSNRFCEEYLVDMGALQCLLPTHQPRVSEHMDHIIKMIEKIIEKD 138
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
C YVVEGDVFF+V+KSPNYG+LSGQ LE+ RAGERVAVDSRKRNPADFALWKAAK EPS
Sbjct: 139 CGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPADFALWKAAKPEEPS 198
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMSAHYLS KFDIHGGG DL FPHHENEIAQ+CAAC+DS V+Y
Sbjct: 199 WESPWGPGRPGWHIECSAMSAHYLSPKFDIHGGGADLKFPHHENEIAQTCAACEDSGVNY 258
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNGHVT NNEKM+KS NF TIR+IT YHPLALRHFL+SA YRSPL++S QL+S+S
Sbjct: 259 WLHNGHVTINNEKMAKSKKNFKTIREITASYHPLALRHFLMSAQYRSPLSFSASQLESSS 318
Query: 242 DAVFYIYQTLQDCEVALSPFQ----EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
DA++Y+YQTLQD + LSP++ E G A P +D I KL+ EF ++M DDLNT+H
Sbjct: 319 DALYYVYQTLQDLDEDLSPYREALSEDGGKAEQTPEGKDIIKKLKSEFESKMLDDLNTAH 378
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
ILTGA+QDALKFIN++ + LKK Q K+Q++S++ SL +IE +EVL +LGLL +Y+E
Sbjct: 379 ILTGAYQDALKFINANRSKLKKMQ-KKQRMSMLVSLVEIEKAAREVLDVLGLLTTLSYAE 437
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
VL+++K K L RAE+ EED+L+ IE+R AR NKDF+KSD+IR LTRKGIALMD GKET
Sbjct: 438 VLKEMKLKTLIRAEMGEEDILREIEDRITARNNKDFAKSDEIREKLTRKGIALMDFGKET 497
Query: 418 IWRPC 422
+WRPC
Sbjct: 498 VWRPC 502
>gi|9758060|dbj|BAB08639.1| cysteine-tRNA ligase [Arabidopsis thaliana]
Length = 500
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 284/425 (66%), Positives = 341/425 (80%), Gaps = 16/425 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN GE+PL LSNR+C EYLVDM LQCLPPT+QPRVS+HM+ I MI +II D
Sbjct: 79 KIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQPRVSEHMDNIIKMIEKIIEKD 138
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
C YVVEGDVFF+V+KSPNYG+LSGQ LE+ RAGERVAVDSRKRNPADFALWKAAK EPS
Sbjct: 139 CGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPADFALWKAAKPDEPS 198
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMS HYLS KFDIHGGG DL FPHHENEIAQ+CAAC+DS V+Y
Sbjct: 199 WESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFPHHENEIAQTCAACEDSGVNY 258
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNGHVT NNEKM+KS NF TIR+IT YHPLALRHFL+SA YRSPL+++ QL+S+S
Sbjct: 259 WLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFLMSAQYRSPLSFTASQLESSS 318
Query: 242 DAVFYIYQTLQDCEVALSPFQ----EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
+A++ LSP+Q E G + +D I KL+ EF ++M DDLNT+H
Sbjct: 319 EALY-----------CLSPYQDALSEDGGKSEQTAEGKDIIKKLKTEFESKMLDDLNTAH 367
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
ILTGA+QDALKFIN+SL+ LKK Q K+Q++S++ SL +IE +EVL +LGLL +Y+E
Sbjct: 368 ILTGAYQDALKFINASLSKLKKMQ-KKQRMSMLVSLVEIEKAAREVLDVLGLLTTLSYAE 426
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+L+++K K L RAE+ EE + QLIEER ARKNKDF+KSD+IR LTRKGIALMD+GKET
Sbjct: 427 ILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEIREKLTRKGIALMDIGKET 486
Query: 418 IWRPC 422
+WRPC
Sbjct: 487 VWRPC 491
>gi|357499285|ref|XP_003619931.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355494946|gb|AES76149.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 584
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 285/429 (66%), Positives = 334/429 (77%), Gaps = 37/429 (8%)
Query: 3 IIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDC 62
II+RAN+ G +PL LS +C EY VDM+DL C PT +PRVSDH++QIKDMIT+IINND
Sbjct: 135 IIKRANEKGVDPLELSRHFCDEYNVDMSDLLCERPTKEPRVSDHIDQIKDMITKIINNDF 194
Query: 63 AYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSW 122
AY V+GDVF++VEK PNYG LSGQR KR+PADFALWKAAK GEPSW
Sbjct: 195 AYEVDGDVFYSVEKFPNYGALSGQR---------------KRHPADFALWKAAKPGEPSW 239
Query: 123 DSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYW 182
DSPWGPGRPGWHIECSAMSA YLS KFDIHGGGIDLIFPHHENEIAQ+ AA ++S + YW
Sbjct: 240 DSPWGPGRPGWHIECSAMSACYLSHKFDIHGGGIDLIFPHHENEIAQNRAADKESRIKYW 299
Query: 183 MHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASD 242
+HNGHVTNNNEKMSKSLGNFFT+R+ITERYHPLALRHFLISAHYR+PLNYS+ QL+++SD
Sbjct: 300 LHNGHVTNNNEKMSKSLGNFFTVREITERYHPLALRHFLISAHYRAPLNYSIAQLETSSD 359
Query: 243 AVFYIYQ------TLQDCEVALSPF--QEHGKTARINPAAEDCINKLRDEFHARMSDDLN 294
A++YI+Q TL+DC ALS F ++ K +IN AAE CINKL++EF M+DDL
Sbjct: 360 AIYYIFQTSSSLKTLEDCRDALSSFLQEDSEKKDQIN-AAEKCINKLKEEFQTEMNDDLQ 418
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T IL GA +ALKF+N SL Q KQ SL K+E EV+EVL++LGLL +
Sbjct: 419 THVILKGALLEALKFMNRSL------QFKQ-------SLLKVEQEVREVLKVLGLLSSLS 465
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
Y+EVLQQLKDKALKRA LTE++VL+LIEER AR NKDF+KSD IR DLT KGIAL D+
Sbjct: 466 YAEVLQQLKDKALKRAGLTEKEVLKLIEERKQARINKDFAKSDNIRTDLTAKGIALEDVD 525
Query: 415 KETIWRPCV 423
E IWRPC+
Sbjct: 526 NEMIWRPCI 534
>gi|296082122|emb|CBI21127.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 277/431 (64%), Positives = 336/431 (77%), Gaps = 8/431 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN++GE+P++LS RYCQE+ VDM L CLPP+ +P VSDHM QI DMI QII+ND
Sbjct: 49 KIIARANEMGEDPINLSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDND 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAY VEGDV+F+V+K P YGRLSG+++E+NRAGERVAVDSRK+NPADFALWKAAK GEP
Sbjct: 109 CAYRVEGDVYFSVDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPF 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC+ SN+SY
Sbjct: 169 WDSPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSNISY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FLI HYRSP+NYS +QL+SAS
Sbjct: 229 WIHNGFVTIDSEKMSKSLGNFFTIRQVIDIYHPLALRLFLIGTHYRSPINYSDVQLESAS 288
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D VFYIYQTL DC+ A+ + K + P DCINK ++F MSDDL+T +L
Sbjct: 289 DRVFYIYQTLHDCQNAMDQ-DDMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVVL-A 346
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A D LK IN ++L ++ K+Q+L L ESL +E +++VL ILGL+ P +YSE L Q
Sbjct: 347 ALSDPLKTIN---DLLHTRKGKKQELRL-ESLAALEKVIRDVLTILGLM-PASYSEALLQ 401
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
L++KALKR++LTE+ +LQ IEER ARKNK++ KSD IR DL GIALMD T WRP
Sbjct: 402 LREKALKRSKLTEDHILQKIEERTMARKNKEYEKSDAIRKDLAAVGIALMDSPDGTTWRP 461
Query: 422 CV-LVEQEQEA 431
+ L QEQ A
Sbjct: 462 AIPLALQEQVA 472
>gi|359476173|ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
Length = 571
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 277/431 (64%), Positives = 336/431 (77%), Gaps = 8/431 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN++GE+P++LS RYCQE+ VDM L CLPP+ +P VSDHM QI DMI QII+ND
Sbjct: 146 KIIARANEMGEDPINLSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDND 205
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAY VEGDV+F+V+K P YGRLSG+++E+NRAGERVAVDSRK+NPADFALWKAAK GEP
Sbjct: 206 CAYRVEGDVYFSVDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPF 265
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC+ SN+SY
Sbjct: 266 WDSPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSNISY 325
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FLI HYRSP+NYS +QL+SAS
Sbjct: 326 WIHNGFVTIDSEKMSKSLGNFFTIRQVIDIYHPLALRLFLIGTHYRSPINYSDVQLESAS 385
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D VFYIYQTL DC+ A+ + K + P DCINK ++F MSDDL+T +L
Sbjct: 386 DRVFYIYQTLHDCQNAMDQ-DDMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVVL-A 443
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A D LK IN ++L ++ K+Q+L L ESL +E +++VL ILGL+ P +YSE L Q
Sbjct: 444 ALSDPLKTIN---DLLHTRKGKKQELRL-ESLAALEKVIRDVLTILGLM-PASYSEALLQ 498
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
L++KALKR++LTE+ +LQ IEER ARKNK++ KSD IR DL GIALMD T WRP
Sbjct: 499 LREKALKRSKLTEDHILQKIEERTMARKNKEYEKSDAIRKDLAAVGIALMDSPDGTTWRP 558
Query: 422 CV-LVEQEQEA 431
+ L QEQ A
Sbjct: 559 AIPLALQEQVA 569
>gi|224141927|ref|XP_002324312.1| predicted protein [Populus trichocarpa]
gi|222865746|gb|EEF02877.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/431 (62%), Positives = 327/431 (75%), Gaps = 7/431 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+LGE+P+SLS RYC+E+L DM L CLPP+ +PRVSDHM QI DMI +I+ N
Sbjct: 66 KIIARANELGEDPISLSKRYCEEFLHDMVYLHCLPPSVEPRVSDHMPQIIDMIERILENG 125
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+V+K P YGRLSG++LE+NRAGERVAVDSRK+NPADFALWK+AK GEP
Sbjct: 126 YAYRIDGDVYFSVDKLPEYGRLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPF 185
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC+DSN+SY
Sbjct: 186 WDSPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACRDSNISY 245
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT ++EKMSKSLGNFFTIRQ+ YHPLALR FL+ HYRSP+NYS +QL+SAS
Sbjct: 246 WVHNGFVTIDSEKMSKSLGNFFTIRQVINLYHPLALRLFLLGTHYRSPVNYSDVQLESAS 305
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +FYIYQTL DCE LS + + I P + INK D MSDDL+T +L
Sbjct: 306 ERIFYIYQTLHDCENILSQHRVAFEKDAIPPDTINDINKFHDTLVTSMSDDLHTP-VLLS 364
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A D LK IN L+ K K +Q+ IES+ +E V+ L +LGL+PP Y+E LQQ
Sbjct: 365 ALSDPLKIINDMLHTRKGK----KQIKRIESIAALEKMVRNALMVLGLMPP-TYNEALQQ 419
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
L++KAL+RA+LTE+ +LQ IEER ARK+KD+ KSD IR DL GIALMD T WRP
Sbjct: 420 LREKALRRAKLTEDQILQKIEERTVARKDKDYEKSDAIRKDLAALGIALMDSPDGTSWRP 479
Query: 422 CV-LVEQEQEA 431
+ L QEQ+
Sbjct: 480 AIPLALQEQQV 490
>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 563
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/431 (61%), Positives = 325/431 (75%), Gaps = 13/431 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+LGE+P+SLS RYC+E+ DM L CLPP+ +P VSDHM QI +MI QI++N
Sbjct: 142 KIIARANELGEDPISLSRRYCEEFHNDMVYLHCLPPSIEPCVSDHMPQIINMIKQILDNG 201
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAY ++GDV+F+++ P YG+LSG++LE+NRAGERVAVDSRK+NPADFALWK+AK GEP
Sbjct: 202 CAYRIDGDVYFSIDGYPEYGKLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPF 261
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC+ SN+SY
Sbjct: 262 WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACRGSNISY 321
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT N+EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+NYS +QL+SAS
Sbjct: 322 WVHNGFVTINSEKMSKSLGNFFTIRQVIDLYHPLALRFFLLGTHYRSPVNYSDVQLESAS 381
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +FYIYQTL DCE +S + + + D INK D F MSDDL+T +L
Sbjct: 382 ERIFYIYQTLHDCETVISQHETAFEKDSVPSDTLDGINKFSDVFVTSMSDDLHTP-VLLA 440
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A D LK IN L+ K+ I+SL +E V++ L +LGL+ P YSEVLQQ
Sbjct: 441 ALSDPLKIINDMLHTRKR----------IQSLAALEKIVRDALSVLGLM-PTTYSEVLQQ 489
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
L++KAL+RA+LTEE VLQ IEER ARKN+D+ +SD IR DL GIALMD T WRP
Sbjct: 490 LREKALRRAKLTEEQVLQRIEERTVARKNRDYERSDAIRKDLATHGIALMDSPDGTSWRP 549
Query: 422 CV-LVEQEQEA 431
+ L QEQ+A
Sbjct: 550 AIPLAMQEQQA 560
>gi|449437168|ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/431 (61%), Positives = 326/431 (75%), Gaps = 7/431 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+LGE+PL+LS RYC+E+ DM L CLPP+ +P+VSDHM QI DMI QI++N
Sbjct: 149 KIIARANELGEDPLNLSRRYCEEFRRDMMYLHCLPPSVEPQVSDHMPQIIDMIKQILDNG 208
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F V+K P YG+LSG++LE+NRAGERV+VDSRK+NPADFALWK+AK GEP
Sbjct: 209 YAYSVDGDVYFNVDKFPEYGQLSGRKLEDNRAGERVSVDSRKKNPADFALWKSAKEGEPF 268
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC+ SNVSY
Sbjct: 269 WESPWGPGRPGWHIECSAMSASYLGYSFDIHGGGMDLVFPHHENEIAQSCAACRTSNVSY 328
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+NYS L L+SAS
Sbjct: 329 WVHNGFVTIDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLLGTHYRSPINYSDLLLESAS 388
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D +FYIYQTL DC +S E I P+ + INK + F MSDD++T +L
Sbjct: 389 DRIFYIYQTLDDCRTVISQEDESSFKGPIAPSLVEEINKFSNVFLTSMSDDIHTPVVL-A 447
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A D LK IN ++L ++ K+Q+ + ESL +E + VL ILGL+ P +YSE LQQ
Sbjct: 448 ALSDPLKIIN---DLLHTRKGKKQEFRM-ESLAALEKIIGNVLSILGLM-PASYSEALQQ 502
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
LK+KAL RA++T + VLQ IEER AARKNK++ KSD IR DL GI+LMD T WRP
Sbjct: 503 LKEKALTRAKMTNDQVLQKIEERNAARKNKEYEKSDSIRTDLAAVGISLMDGPNGTTWRP 562
Query: 422 CV-LVEQEQEA 431
V L QE +A
Sbjct: 563 TVPLALQEHQA 573
>gi|449517190|ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/431 (61%), Positives = 325/431 (75%), Gaps = 7/431 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+LGE+PL+LS RYC+E+ DM L CLPP+ +P+VSDHM QI DMI QI++N
Sbjct: 149 KIIARANELGEDPLNLSRRYCEEFRRDMMYLHCLPPSVEPQVSDHMPQIIDMIKQILDNG 208
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F V+K P YG+LSG++LE+NRAGERV+VDSRK+NPADFALWK+AK GEP
Sbjct: 209 YAYCVDGDVYFNVDKFPEYGQLSGRKLEDNRAGERVSVDSRKKNPADFALWKSAKEGEPF 268
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCA C+ SNVSY
Sbjct: 269 WESPWGPGRPGWHIECSAMSASYLGYSFDIHGGGMDLVFPHHENEIAQSCATCRTSNVSY 328
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+NYS L L+SAS
Sbjct: 329 WVHNGFVTIDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLLGTHYRSPINYSDLLLESAS 388
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D +FYIYQTL DC +S E I P+ + INK + F MSDD++T +L
Sbjct: 389 DRIFYIYQTLDDCRTVVSQEDESSFKGSIAPSLVEEINKFSNVFLTSMSDDIHTPVVL-A 447
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A D LK IN ++L ++ K+Q+ + ESL +E + VL ILGL+ P +YSE LQQ
Sbjct: 448 ALSDPLKIIN---DLLHTRKGKKQEFRM-ESLAALEKIIGNVLSILGLM-PASYSEALQQ 502
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
LK+KAL RA++T + VLQ IEER AARKNK++ KSD IR DL GI+LMD T WRP
Sbjct: 503 LKEKALTRAKMTNDQVLQKIEERNAARKNKEYEKSDSIRTDLAAVGISLMDGPNGTTWRP 562
Query: 422 CV-LVEQEQEA 431
V L QE +A
Sbjct: 563 TVPLALQEHQA 573
>gi|356515262|ref|XP_003526320.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 561
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/425 (62%), Positives = 326/425 (76%), Gaps = 12/425 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA +LGE+P+SLS RYC+E+ DM L CL P+ +P+VS+HM QI DMI +I+NN
Sbjct: 138 KIIARAKELGEDPISLSRRYCEEFCQDMVTLNCLSPSVEPKVSEHMPQIIDMIEKILNNG 197
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY+V+GDV+F VEK P YG+LS + LE+NRAGERVAVDSRK+NPADFALWK+AK GEP
Sbjct: 198 YAYIVDGDVYFNVEKFPEYGKLSSRDLEDNRAGERVAVDSRKKNPADFALWKSAKPGEPF 257
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+S WGPGRPGWHIECSAMSA YL FDIHGGGIDL+FPHHENEIAQSCAAC+ S++S
Sbjct: 258 WESRWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACKKSDISV 317
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG VT ++ KMSKSLGNFFTIRQ+ + YHPLALR+FL+SAHYRSP+NYS +QL+SAS
Sbjct: 318 WMHNGFVTIDSVKMSKSLGNFFTIRQVIDIYHPLALRYFLMSAHYRSPINYSNIQLESAS 377
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTAR---INPAAEDCINKLRDEFHARMSDDLNTSHI 298
D VFYIY+TL +CE L+ +H +T R I P D I+K D F MSDDL+T +
Sbjct: 378 DRVFYIYETLHECESFLN---QHDQTIRKDSIPPDTLDIIDKFHDVFLTSMSDDLHTPVV 434
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L G D LK IN ++L ++ K+QQ IESL +E V++VL +LGL+ P +Y EV
Sbjct: 435 LAG-MSDPLKSIN---DLLHTRKGKKQQFR-IESLSALEKSVRDVLTVLGLM-PASYFEV 488
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQQLK+KALKRA LTE+DVLQ IEERAAAR K+++KSD IR DL GI LMD T
Sbjct: 489 LQQLKEKALKRANLTEDDVLQKIEERAAARIQKEYAKSDAIRKDLAVVGITLMDSPNGTT 548
Query: 419 WRPCV 423
WRP +
Sbjct: 549 WRPAI 553
>gi|356509902|ref|XP_003523681.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 557
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/422 (62%), Positives = 321/422 (76%), Gaps = 8/422 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA +LGE+P+SLS RYC+E+ DM L CL P+ +P+VS+HM QI DMI +I+NN
Sbjct: 136 KIIARAKELGEDPISLSWRYCEEFCQDMVTLNCLSPSVEPKVSEHMPQIIDMIEKILNNG 195
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY+V+GDV+F VEK P YG+LS + LE+NRAGERVAVDSRK+NPADFALWK+AK GEP
Sbjct: 196 YAYIVDGDVYFNVEKFPEYGKLSSRDLEDNRAGERVAVDSRKKNPADFALWKSAKPGEPF 255
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMSA YL FDIHGGGIDL+FPHHENEIAQSCAAC+ S++S
Sbjct: 256 WESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACKKSDISI 315
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG VT ++ KMSKSLGNFFTIRQ+ + YHPLALR+FL+SAHYRSP+NYS +QL+SAS
Sbjct: 316 WMHNGFVTIDSVKMSKSLGNFFTIRQVIDVYHPLALRYFLMSAHYRSPINYSNIQLESAS 375
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D VFYIY+TL +CE L+ Q + P D I+K D F MSDDL+T +L G
Sbjct: 376 DRVFYIYETLHECESFLN--QHDQRKDSTPPDTLDIIDKFHDVFLTSMSDDLHTPVVLAG 433
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
D LK IN ++L ++ K+QQ IESL +E V++VL +LGL+ P +YSEVLQQ
Sbjct: 434 -MSDPLKSIN---DLLHARKGKKQQFR-IESLSALEKSVRDVLTVLGLM-PASYSEVLQQ 487
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
LK KALKRA TEE+VLQ IEERA AR K+++KSD IR DL GI LMD T WRP
Sbjct: 488 LKVKALKRANFTEEEVLQKIEERATARMQKEYAKSDAIRKDLAVLGITLMDSPNGTTWRP 547
Query: 422 CV 423
+
Sbjct: 548 AI 549
>gi|125564667|gb|EAZ10047.1| hypothetical protein OsI_32351 [Oryza sativa Indica Group]
Length = 569
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/429 (61%), Positives = 325/429 (75%), Gaps = 11/429 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN LGE+P SLS RY ++L DMA+L CLPP+ +PRVSDH++QI +MI QII+ND
Sbjct: 144 KIIARANQLGEDPFSLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQIINMIKQIIDND 203
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAY + GDV+F+VE P YG LSG++L++NRAGERVAVD RK+NPADFALWKAAK GEPS
Sbjct: 204 CAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAVDERKKNPADFALWKAAKDGEPS 263
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQS AAC DS+++Y
Sbjct: 264 WDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSSINY 323
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N++KMSKSLGNF TIR++TE YHPLALR FL+ HYRSP+NY++ QL+ AS
Sbjct: 324 WIHNGFVNVNSQKMSKSLGNFVTIRKVTELYHPLALRMFLLGTHYRSPINYTIEQLNVAS 383
Query: 242 DAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
D ++Y YQTLQDCE + Q + G +N +CI KL DEF MSDDL+TS +
Sbjct: 384 DRLYYTYQTLQDCEESCQQHQSKAGDPLPVN--TTNCIQKLHDEFETSMSDDLHTS-VAL 440
Query: 301 GAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
A + LK +N L+ K KKQ K+ +ESL +E +++ VL +LGLL P +Y E L
Sbjct: 441 AAISEPLKVMNDLLHTRKGKKQEKR-----LESLSAMEEKIRMVLSVLGLL-PSSYYEAL 494
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
QQL++KAL+RA +TEE VLQ IEER +ARK K + KSD+IR +L GIALMD T W
Sbjct: 495 QQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDEIRKELAAVGIALMDGPDGTTW 554
Query: 420 RPCVLVEQE 428
RP V + ++
Sbjct: 555 RPSVPLSEQ 563
>gi|115480611|ref|NP_001063899.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|113632132|dbj|BAF25813.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|125606594|gb|EAZ45630.1| hypothetical protein OsJ_30298 [Oryza sativa Japonica Group]
Length = 569
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/428 (60%), Positives = 325/428 (75%), Gaps = 9/428 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN LGE+P SLS RY ++L DMA+L CLPP+ +PRVSDH++QI +MI QII+ND
Sbjct: 144 KIIARANQLGEDPFSLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQIINMIKQIIDND 203
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAY + GDV+F+VE P YG LSG++L++NRAGERVAVD RK+NPADFALWKAAK GEPS
Sbjct: 204 CAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAVDERKKNPADFALWKAAKDGEPS 263
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQS AAC DS+++Y
Sbjct: 264 WDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSSINY 323
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N++KMSKSLGNF TIR++TE YHPLALR FL+ HYRSP+NY++ QL+ AS
Sbjct: 324 WIHNGFVNVNSQKMSKSLGNFVTIRKVTELYHPLALRMFLLGTHYRSPINYTIEQLNVAS 383
Query: 242 DAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
D ++Y YQTLQDCE + Q + G +N +CI KL DEF MSDDL+TS +
Sbjct: 384 DRLYYTYQTLQDCEESCQQHQSKAGDPLPVN--TTNCIQKLHDEFETSMSDDLHTS-VAL 440
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
A + LK +N L+ K K+ +++ +ESL +E +++ VL +LGLL P +Y E LQ
Sbjct: 441 AAISEPLKVMNDLLHTRKGKKQEKR----LESLSAMEEKIRMVLSVLGLL-PSSYYEALQ 495
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
QL++KAL+RA +TEE VLQ IEER +ARK K + KSD+IR +L GIALMD T WR
Sbjct: 496 QLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWR 555
Query: 421 PCVLVEQE 428
P V + ++
Sbjct: 556 PSVPLSEQ 563
>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/429 (60%), Positives = 323/429 (75%), Gaps = 6/429 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN++GENP+SLS R+C E+ DM+ L CLPP+ +PRVSDHM QI DMI QI++N
Sbjct: 155 KIIARANEVGENPISLSRRFCDEFHQDMSYLHCLPPSVEPRVSDHMPQIIDMIKQIVDNG 214
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+VEK P+YGRLSG++LE+NRAGERVA+DSRKRNPADFALWK+AK GEP
Sbjct: 215 FAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVAIDSRKRNPADFALWKSAKEGEPF 274
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMS+ YL FDIHGGG+DL+FPHHENEI QSCAAC +SN+ Y
Sbjct: 275 WESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDLMFPHHENEIVQSCAACCESNIRY 334
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT N+EKMSKSLGNFFTIRQ+ E YHPLALR FL+ HYRSP+NYS + L+SAS
Sbjct: 335 WVHNGFVTINSEKMSKSLGNFFTIRQVIELYHPLALRLFLMGTHYRSPINYSDVLLESAS 394
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +FYIYQTLQD + LS + I CIN L++ F MSDDL+T +L
Sbjct: 395 ERIFYIYQTLQDSQALLSEYGRANLKDSIPQDIVSCINDLQNSFVISMSDDLHTPVVL-A 453
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A D LK IN ++L ++ K+++L +ESL +E +K VL LGL+ P +YSE L Q
Sbjct: 454 ALSDPLKTIN---DLLHTRKGKKRELR-VESLAALEKTIKHVLTALGLM-PSSYSEALHQ 508
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
L++KALKR + +E +V Q IEER ARKNK++ KSD IR +L GIALMD + T WRP
Sbjct: 509 LREKALKRVKFSETEVQQKIEERDMARKNKEYEKSDAIRKELAAVGIALMDSPEGTTWRP 568
Query: 422 CVLVEQEQE 430
V +QE
Sbjct: 569 VVPTALQQE 577
>gi|297816954|ref|XP_002876360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322198|gb|EFH52619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/424 (62%), Positives = 321/424 (75%), Gaps = 30/424 (7%)
Query: 6 RANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV 65
+A GE PL LSNR+C+EYL+DM LQCL PT QPRVSDHME I MI +II N C Y
Sbjct: 79 KAKKCGEKPLDLSNRFCEEYLLDMTALQCLIPTRQPRVSDHMEHIIKMIEKIIENGCGYA 138
Query: 66 VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSP 125
V GDVFF+V+KSP+YG+LSGQRL++ +AG+RVAVDSRKRNPADFALW AAK+GEPSW+SP
Sbjct: 139 VGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRNPADFALWNAAKSGEPSWESP 198
Query: 126 WGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHN 185
WGPGRPGWHIECSAMSAHYLS +FDIHGGG DL FPHHENEIAQ+CAAC+DS V+YW+HN
Sbjct: 199 WGPGRPGWHIECSAMSAHYLSPRFDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHN 258
Query: 186 GHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVF 245
GHVTNNN KM KSL NFFTIR+IT +YHPLALRHFL+SA YRSPLNYSV QL+S+SDA++
Sbjct: 259 GHVTNNNVKMGKSLDNFFTIREITAKYHPLALRHFLMSAQYRSPLNYSVSQLESSSDALY 318
Query: 246 YIYQTLQDCEVALSPFQEH-----GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
YQTL+D LSP++E GKT + A E +
Sbjct: 319 CAYQTLEDLVKYLSPYREEMSGDVGKTQQTAEAKE-----------------------MI 355
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
++ALKFIN S++ LKK Q K+Q++SLI SL ++E V+EVL +LGLL +Y E L+
Sbjct: 356 KKVKNALKFINVSISKLKKIQ-KKQRMSLIVSLVEVEKAVREVLDVLGLLTTLSYDEFLK 414
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKETIW 419
++K KAL RA + EE+VL+ I+ER ARKNKDF +SDQIR L KGIAL D+ GK+T+W
Sbjct: 415 EMKQKALTRAGIGEEEVLRRIDERKLARKNKDFKRSDQIRELLAAKGIALEDIPGKDTVW 474
Query: 420 RPCV 423
RPC
Sbjct: 475 RPCT 478
>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/429 (60%), Positives = 322/429 (75%), Gaps = 6/429 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN++GENP+SLS R+C E+ DM+ L CLPP+ +PRVSDHM QI DMI QI++N
Sbjct: 155 KIIARANEVGENPISLSRRFCDEFHQDMSYLHCLPPSVEPRVSDHMPQIIDMIKQIVDNG 214
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+VEK P+YGRLSG++LE+NRAGERVA+DSRKRNPADFALWK+AK GEP
Sbjct: 215 FAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVAIDSRKRNPADFALWKSAKEGEPF 274
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMS+ YL FDIHGGG+DL+FPHHENEI QSCAAC +SN+ Y
Sbjct: 275 WESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDLMFPHHENEIVQSCAACCESNIRY 334
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT N+EKMSKSLGNFFTIRQ+ E YHPLALR FL+ HYRSP+NYS + L+SAS
Sbjct: 335 WVHNGFVTINSEKMSKSLGNFFTIRQVIELYHPLALRLFLMGTHYRSPINYSDVLLESAS 394
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +FYIYQTLQD + LS + I CIN L++ F MSDDL+T +L
Sbjct: 395 ERIFYIYQTLQDSQALLSEYGRANLKDSIPQDIVSCINDLQNSFVISMSDDLHTPVVL-A 453
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A D LK IN ++L ++ K+++L +ESL +E +K VL LGL+ P +YSE L Q
Sbjct: 454 ALSDPLKTIN---DLLHTRKGKKRELR-VESLAALEKTIKHVLTALGLM-PSSYSEALHQ 508
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
L++KALKR + +E +V Q IEER ARK K++ KSD IR +L GIALMD + T WRP
Sbjct: 509 LREKALKRVKFSETEVQQKIEERDMARKYKEYEKSDAIRKELAAVGIALMDSPEGTTWRP 568
Query: 422 CVLVEQEQE 430
V +QE
Sbjct: 569 VVPTALQQE 577
>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 493
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/422 (59%), Positives = 318/422 (75%), Gaps = 6/422 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA +L E+P+SLS R+C+E+ DM LQCL P+ QPRVSDH+ QI D+I QI++N
Sbjct: 66 KIIARAKELEEDPISLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNG 125
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GD++F+V+K P YG+LSG++LE+NRAGERVAVD+RK++PADFALWKAAK GEP
Sbjct: 126 YAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKAAKEGEPF 185
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC SN+SY
Sbjct: 186 WESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDSSNISY 245
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+NYS L+SAS
Sbjct: 246 WIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPINYSDFLLESAS 305
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +FYIYQTL DCE AL + + IN R EF A MSDDL T +
Sbjct: 306 ERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTP-VTLA 364
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A + LK IN ++ K K+ +++ ESL+ +E +++VL ILGL+P +YSEVL+Q
Sbjct: 365 AMSEPLKTINDLIHTRKGKKQARRE----ESLKALETTIRDVLTILGLMPT-SYSEVLEQ 419
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
LK+KALKRA L EEDVLQ ++ER ARKNK++ +SD IR DL + GIALMD + T WRP
Sbjct: 420 LKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDSPEGTTWRP 479
Query: 422 CV 423
+
Sbjct: 480 AI 481
>gi|42569504|ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 563
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/422 (60%), Positives = 318/422 (75%), Gaps = 6/422 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA +L E+P+SLS R+C+E+ DM LQCL P+ QPRVSDH+ QI D+I QI++N
Sbjct: 136 KIIARAKELEEDPISLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNG 195
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GD++F+V+K P YG+LSG++LE+NRAGERVAVD+RK++PADFALWKAAK GEP
Sbjct: 196 YAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKAAKEGEPF 255
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC SN+SY
Sbjct: 256 WESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDSSNISY 315
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+NYS L+SAS
Sbjct: 316 WIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPINYSDFLLESAS 375
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +FYIYQTL DCE AL + + IN R EF A MSDDL T L
Sbjct: 376 ERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTPVTL-A 434
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A + LK IN ++ K K+ +++ ESL+ +E +++VL ILGL+P +YSEVL+Q
Sbjct: 435 AMSEPLKTINDLIHTRKGKKQARRE----ESLKALETTIRDVLTILGLMPT-SYSEVLEQ 489
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
LK+KALKRA L EEDVLQ ++ER ARKNK++ +SD IR DL + GIALMD + T WRP
Sbjct: 490 LKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDSPEGTTWRP 549
Query: 422 CV 423
+
Sbjct: 550 AI 551
>gi|242050146|ref|XP_002462817.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
gi|241926194|gb|EER99338.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
Length = 571
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/430 (60%), Positives = 321/430 (74%), Gaps = 13/430 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN LGE+P SLS R+ ++L DMA+LQCLPP+ +PRVSDH+ +I +MI QI++N
Sbjct: 146 KIIARANQLGEDPFSLSKRFSDDFLSDMANLQCLPPSVEPRVSDHIHEIINMIKQILDNS 205
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAYVV GDV+F+VE P YG LSG++L++NRAGERVAVD RKRNPADFALWKAAK GEP
Sbjct: 206 CAYVVGGDVYFSVENFPEYGELSGRKLDDNRAGERVAVDERKRNPADFALWKAAKDGEPW 265
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQS AAC DS ++Y
Sbjct: 266 WDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSTINY 325
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N++KMSKSLGNF TIR++ E YHPLALR FL+ HYRSP+NY++ QL+ AS
Sbjct: 326 WIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALRMFLLGTHYRSPINYTIEQLNVAS 385
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTA--RINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
D ++Y YQTL+DCE + Q+ G + P + I KL DEF MSDDL+TS +
Sbjct: 386 DRLYYTYQTLRDCEESC---QQQGSNTGNSLPPNTLNYIQKLHDEFETSMSDDLHTS-VA 441
Query: 300 TGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
A + LK +N L+ K KKQ K+ +E+L ++ +++ VL +LGLL P +Y E
Sbjct: 442 LAAISEPLKVMNDLLHTRKGKKQDKR-----LEALSALDEKIRVVLSVLGLL-PSSYHEA 495
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQQL+DKAL+RA +TEE VLQ IEER AARK K + KSD+IR +L GIALMD T
Sbjct: 496 LQQLRDKALRRASITEELVLQKIEERTAARKAKQYEKSDEIRKELAAVGIALMDGPNGTT 555
Query: 419 WRPCVLVEQE 428
WRP + + +E
Sbjct: 556 WRPSLPLSEE 565
>gi|414873768|tpg|DAA52325.1| TPA: chloroplast protein synthesis1 [Zea mays]
Length = 564
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/432 (59%), Positives = 324/432 (75%), Gaps = 15/432 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN LGE+P SLS R+ ++L DMA+LQCLPP+ +PRVSDH+++I +MI QI++N
Sbjct: 138 KIIARANQLGEDPFSLSKRFSDDFLSDMANLQCLPPSVEPRVSDHVDEIINMIKQILDNR 197
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAYVV GDV+F+V+ P YG LSG++L++NRAGERVAVD RKRNPADFALWKAAK GEP
Sbjct: 198 CAYVVGGDVYFSVDNFPEYGELSGRKLDDNRAGERVAVDERKRNPADFALWKAAKDGEPW 257
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQS AAC DS ++Y
Sbjct: 258 WDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSTINY 317
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N++KMSKSLGNF TIR++ E YHPLALR FL+ HYRSP+NY++ QL+ AS
Sbjct: 318 WIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALRMFLLGTHYRSPINYTIEQLNVAS 377
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---KLRDEFHARMSDDLNTSHI 298
D ++Y YQTL+DCE +H ++ NP + +N KL DEF MSDDL+TS +
Sbjct: 378 DRLYYTYQTLRDCE----EICQHQQSNTGNPLPANTLNYIQKLHDEFETSMSDDLHTS-V 432
Query: 299 LTGAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
A + LK +N L+ K KKQ K+ +ESL +E +++ VL +LGLL P +Y E
Sbjct: 433 ALAAMSEPLKVMNDLLHTRKGKKQDKR-----LESLSALEEKIRVVLSVLGLL-PSSYHE 486
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
LQQL+DKAL+RA +TEE V+Q IEER AARK K + KSD+IR +L GIALMD T
Sbjct: 487 ALQQLRDKALRRASITEELVVQKIEERTAARKAKQYEKSDEIRKELAAVGIALMDGPDGT 546
Query: 418 IWRPCVLVEQEQ 429
WRP + + +E+
Sbjct: 547 TWRPSLPLPEEE 558
>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 256/433 (59%), Positives = 318/433 (73%), Gaps = 7/433 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+LGE+P+SLS R+C+E+ DM LQCL P+ QP VSDH+ QI D+I QI++N
Sbjct: 136 KIIARANELGEDPISLSRRFCEEFKRDMEQLQCLDPSVQPLVSDHIPQIVDLIKQILDNG 195
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GD++F+V+K P YG+LSG++LE+NRAGERVAVD+RK++PADFALWK AK GEP
Sbjct: 196 YAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKTAKEGEPF 255
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMSA YL FDIHGGG+DL+FPHHENEIAQSCAAC SN+SY
Sbjct: 256 WESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDSSNISY 315
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT ++EKMSKSLGNFFTIRQ+ + YHPLALR FL+ HYRSP+NYS L+SAS
Sbjct: 316 WIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLMGTHYRSPINYSDFLLESAS 375
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +FYIYQTL DCE L + IN EF A MSDDL T L
Sbjct: 376 ERIFYIYQTLHDCESLLGEKDSTFGNDSVPSDTLTTINTFHSEFVASMSDDLLTPVTL-A 434
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A + LK IN ++ K K+ +++ ESL+ +E +++VL ILGL+P +YSEVL+Q
Sbjct: 435 AMSEPLKTINDIIHTRKGKKQARRE----ESLKALETTIRDVLTILGLMPT-SYSEVLEQ 489
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
LK+KALKRA L EEDVLQ ++ER ARKNK++ +SD IR DL GIALMD + T WRP
Sbjct: 490 LKEKALKRAGLEEEDVLQRVQERTDARKNKEYERSDAIRKDLASVGIALMDSPEGTTWRP 549
Query: 422 CV-LVEQEQEAPP 433
+ L QE P
Sbjct: 550 AIPLALQEPVTTP 562
>gi|212723404|ref|NP_001131561.1| uncharacterized protein LOC100192902 [Zea mays]
gi|194691858|gb|ACF80013.1| unknown [Zea mays]
gi|414590163|tpg|DAA40734.1| TPA: hypothetical protein ZEAMMB73_139992 [Zea mays]
Length = 573
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/429 (59%), Positives = 321/429 (74%), Gaps = 11/429 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN LGE+P +LS R+ ++L+DMA+LQCLPP+ +PRVSDH+++I +MI QI++N
Sbjct: 148 KIIARANQLGEDPFNLSKRFSDDFLLDMANLQCLPPSVEPRVSDHIDEIINMIKQILDNS 207
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAYVV GDV+F+V+ P+YG LSG++L++NRAGERV+VD RKRNPADFALWKAAK GEP
Sbjct: 208 CAYVVGGDVYFSVDSFPDYGELSGRKLDDNRAGERVSVDERKRNPADFALWKAAKDGEPW 267
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENEIAQS AAC DS ++Y
Sbjct: 268 WDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSTINY 327
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N++KMSKSLGNF TIR++ E YHPLALR FL+ HYRSP+NY++ QL+ S
Sbjct: 328 WIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALRMFLLGTHYRSPINYTIEQLNVTS 387
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHARMSDDLNTSHILT 300
D ++Y YQTL DCE Q+ T PA + I KL +EF MSDDL+TS +
Sbjct: 388 DRLYYTYQTLLDCEEICQ--QQQSNTGNSLPANTLNYIQKLHEEFETSMSDDLHTS-VAL 444
Query: 301 GAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
A + LK +N L+ K KKQ K+ +ESL +E +++ VL +LGLL P +Y E L
Sbjct: 445 AAISEPLKVMNDLLHTRKGKKQDKR-----LESLSALEEKIRVVLSVLGLL-PSSYHEAL 498
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
QQL+DKAL+RA +TEE V+Q IEER AARK K + KSD+IR +L GIALMD T W
Sbjct: 499 QQLRDKALRRASITEELVVQKIEERTAARKAKQYEKSDEIRKELAAIGIALMDGPDGTTW 558
Query: 420 RPCVLVEQE 428
RP + + +E
Sbjct: 559 RPSLPILEE 567
>gi|357159997|ref|XP_003578624.1| PREDICTED: cysteinyl-tRNA synthetase-like [Brachypodium distachyon]
Length = 567
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/423 (60%), Positives = 319/423 (75%), Gaps = 9/423 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN LGE+P SLS RY +L DMA LQCLPP+ +PRVSDH++QI +MI QI++N
Sbjct: 141 KIIARANQLGEDPFSLSKRYSDAFLSDMAHLQCLPPSVEPRVSDHIDQIVNMIKQILDNG 200
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAYVV GDV+F+V+ P YG LSG++L++NRAGER+AVD RK+NPADFALWKAAK GEP
Sbjct: 201 CAYVVSGDVYFSVDNFPEYGMLSGRKLDDNRAGERIAVDERKKNPADFALWKAAKDGEPW 260
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSA YL + FDIHGGG DLIFPHHENEIAQS AAC DS+++Y
Sbjct: 261 WDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLIFPHHENEIAQSRAACCDSSINY 320
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N++KMSKSLGNF TIR++ E+YHPLALR FL+ HYRSP+NY+V QL+ AS
Sbjct: 321 WIHNGFVNVNSQKMSKSLGNFVTIRKVIEQYHPLALRMFLLGTHYRSPINYTVEQLNVAS 380
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D ++Y YQTL+D E + Q + + A + CI KL++EF MSDDL+TS +
Sbjct: 381 DRLYYTYQTLRDSEESTQKDQINSEDA-LPATTTHCIEKLQNEFETSMSDDLHTS-VALA 438
Query: 302 AFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
A + LK +N L+ K KKQ K+ +ESL +E +++ VL +LGL+ P +Y E LQ
Sbjct: 439 AISEPLKVMNDLLHTRKGKKQEKR-----LESLFALEEKIRTVLSVLGLM-PSSYYEALQ 492
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
QL++KAL+RA +TE+ VLQ IEER +ARK K + KSD+IR +L GIALMD T WR
Sbjct: 493 QLREKALQRASITEDQVLQKIEERTSARKAKQYEKSDEIRKELAALGIALMDGPDGTTWR 552
Query: 421 PCV 423
P V
Sbjct: 553 PSV 555
>gi|148909295|gb|ABR17747.1| unknown [Picea sitchensis]
Length = 602
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 258/434 (59%), Positives = 329/434 (75%), Gaps = 13/434 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RANDLGENPLSLSNR+C+E+ VDMA+L CLPP+ +PRV+DH+ QI +MI QI+ N
Sbjct: 176 KIISRANDLGENPLSLSNRFCKEFQVDMAELNCLPPSVEPRVTDHINQIIEMIQQILRNG 235
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYVVE GDV+F+V+K P YG LSG++L++NRAGER+AVDSRK+NPADFALWK+AK EP
Sbjct: 236 YAYVVENGDVYFSVDKYPKYGCLSGRKLDDNRAGERIAVDSRKQNPADFALWKSAKPSEP 295
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
WDSPWGPGRPGWHIECSAMSA +L FDIHGGG+DLIFPHHENEIAQSCA+C DSNV
Sbjct: 296 FWDSPWGPGRPGWHIECSAMSAAHLGYCFDIHGGGVDLIFPHHENEIAQSCASCNDSNVP 355
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG VT + EKMSKSLGNFFTIR++ E YHPLALR FL HYRS LNYS QL++A
Sbjct: 356 YWIHNGFVTVDAEKMSKSLGNFFTIREVLESYHPLALRLFLSGTHYRSQLNYSKSQLENA 415
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC---INKLRDEFHARMSDDLNTSH 297
S+ +FYIYQTL+DCE LS H + + P ED IN + + F + MS+DL+ +
Sbjct: 416 SERLFYIYQTLKDCEECLS---GHVRQSIGQPIPEDIQKRINNIHNAFSSSMSNDLHIAM 472
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L A + LK +N +++ +Q ++Q+L + E L +E + +++L LGL+ P +YSE
Sbjct: 473 ALD-ALSEPLKIMN---DLMFTRQGRKQKLRM-EFLDSLEVKTRDLLSDLGLMSP-SYSE 526
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
VL QLK KAL+RA +TE++VLQ IE+RA AR K++S+SD+IR L GIALMD T
Sbjct: 527 VLLQLKSKALRRAGITEDEVLQAIEKRADARAAKNYSESDRIRRKLAVLGIALMDEPSGT 586
Query: 418 IWRPCVLVEQEQEA 431
WRP + +E+E+
Sbjct: 587 TWRPAIPLEEEEHV 600
>gi|326523811|dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 573
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/423 (60%), Positives = 314/423 (74%), Gaps = 9/423 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN LGE+P SLS RY ++L DMA LQCLPP+ +PRVSDH++QI MI QII+N
Sbjct: 146 KIIARANQLGEDPFSLSKRYSDDFLSDMAHLQCLPPSVEPRVSDHIDQIVTMIKQIIDNG 205
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
CAYVV GDV+F+V+ P Y +LSG++L++NRAGERVAVD RK+NPADFALWKAAK GEP
Sbjct: 206 CAYVVSGDVYFSVDNFPEYRKLSGRKLDDNRAGERVAVDERKKNPADFALWKAAKDGEPW 265
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSA YL + FDIHGGG DLIFPHHENEIAQS AAC DS+++Y
Sbjct: 266 WDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLIFPHHENEIAQSRAACCDSSINY 325
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N +KMSKSLGNF TIR++ E YHPLALR FL+ HYRSP+NY+V QL+ AS
Sbjct: 326 WVHNGFVNVNGQKMSKSLGNFITIRKVIELYHPLALRMFLLGTHYRSPINYTVEQLNVAS 385
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINP-AAEDCINKLRDEFHARMSDDLNTSHILT 300
D ++Y YQTL+D E + Q+ + P CI KL ++F MSDDL+TS +
Sbjct: 386 DRLYYTYQTLRDSEESTQ--QDQSSSGDSLPFTTTHCIEKLHEDFETSMSDDLHTS-VAL 442
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
A + LK +N L+ K K+ +++ +ESL +E +V+ VL +LGL+ P +Y E LQ
Sbjct: 443 AAVSEPLKVMNDLLHTRKGKKQEKR----LESLAALEEKVRMVLSVLGLM-PSSYHEALQ 497
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
QL+ KAL+RA +TEE VLQ IEER AARK K F +SD+IR +L GIALMD T WR
Sbjct: 498 QLRGKALRRACVTEEQVLQKIEERTAARKAKQFGRSDEIRDELAALGIALMDGPDGTAWR 557
Query: 421 PCV 423
P V
Sbjct: 558 PSV 560
>gi|168067577|ref|XP_001785689.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662678|gb|EDQ49502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/430 (56%), Positives = 323/430 (75%), Gaps = 11/430 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN++GE+PL+LS R+C E+ VDM L+CLPP +PRVSDH+ QI MI+QII N
Sbjct: 66 KIIKRANEVGEDPLNLSRRFCDEFQVDMELLRCLPPNVEPRVSDHIPQIIKMISQIIENK 125
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
YV+EG DV+F V+ P YG LSG++ E NRAGERV VD+RKRNPADFALWK+AK GEP
Sbjct: 126 NGYVMEGGDVYFEVDTLPTYGCLSGRKQEENRAGERVLVDNRKRNPADFALWKSAKPGEP 185
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAMSA +L KFDIHGGG+DLIFPHHENEIAQSCAAC DS V
Sbjct: 186 AWDSPWGPGRPGWHIECSAMSAEHLGHKFDIHGGGMDLIFPHHENEIAQSCAACADSRVG 245
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG VT +NEKMSKS+GNFFTIR++ E YHPLALR FL+ HYR+P+NYS QL+ A
Sbjct: 246 YWLHNGFVTVDNEKMSKSVGNFFTIREVLELYHPLALRWFLLGTHYRAPVNYSKRQLEVA 305
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSHI 298
SD VFYI+QTL DCE LS Q+ K A NP+ E + + +++ F M+DDLNT +
Sbjct: 306 SDRVFYIFQTLVDCEQILS--QQVDKVAACNPSKEAIELVKSIKNTFRTSMADDLNTP-V 362
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ +F ++ KF+N ++ K ++ K + + SL+ + E++EV+ +LG P +YS+V
Sbjct: 363 VVASFSESFKFMNDLMHTRKGRKDKTR----LVSLQLLITEIQEVMNVLGFQIP-SYSKV 417
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L +++ ALKRA ++ D+ ++ERA+AR+ KD+++SDQIR +L GI LMD G T+
Sbjct: 418 LDEIRALALKRAGMSMNDLAARLQERASAREAKDYARSDQIRLELAAAGIGLMDGGDGTL 477
Query: 419 WRPCVLVEQE 428
WRP V+ E++
Sbjct: 478 WRPIVVAEEQ 487
>gi|357466121|ref|XP_003603345.1| Cysteinyl tRNA synthetase [Medicago truncatula]
gi|355492393|gb|AES73596.1| Cysteinyl tRNA synthetase [Medicago truncatula]
Length = 608
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/467 (55%), Positives = 320/467 (68%), Gaps = 45/467 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+ +LGE+P+SLS RYC+E+ DM L CLP T +P+VS+HM QI +MI +I+NN
Sbjct: 147 KIIARSKELGEDPISLSRRYCEEFCQDMVTLNCLPATVEPKVSEHMPQIIEMIEKILNNG 206
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GD++F VEK P YG+LS + LE+NRAGERVAVDSRK+NPADFALWK+ K GEP
Sbjct: 207 YAYDVDGDIYFNVEKFPEYGKLSSRGLEDNRAGERVAVDSRKKNPADFALWKSTKPGEPF 266
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMSA YL FDIHGGGIDL+FPHHENEIAQSCAAC S++S
Sbjct: 267 WESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACSKSDISV 326
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG VT ++ KMSKSLGNFFTIRQ+ + YHPLALR+FL+SAHYRSP+NYS + L+SAS
Sbjct: 327 WMHNGFVTIDSVKMSKSLGNFFTIRQVVDVYHPLALRYFLMSAHYRSPMNYSNIHLESAS 386
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTAR---INPAAEDCINKLRDEFHARMSDDLNTSHI 298
D VFYIY+TL +CE S ++H +T R + P I D F MSDDL+T
Sbjct: 387 DRVFYIYETLHECE---SFLKQHDQTVRKDSVPPDTLSIIGNFYDVFRTSMSDDLHTPVA 443
Query: 299 LTGAFQDALKFINSSL-------------------------------NM----LKKKQPK 323
L G D LK IN L NM L+ K
Sbjct: 444 LAG-MSDPLKLINDLLHTRKWISGRARHHSIKNTIIREKIVVHVILQNMKDSRLRWFGGK 502
Query: 324 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 383
+QQ IESL ++ + +VL +LGL+ P +Y EVLQQLK+KAL RA LTE+++L+ IEE
Sbjct: 503 KQQFR-IESLAALKKSIGDVLTVLGLM-PSSYYEVLQQLKEKALNRANLTEDEILKKIEE 560
Query: 384 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQ 429
R AAR K+++KSD IR L GIALMD T WRP + L QEQ
Sbjct: 561 RDAARIQKEYAKSDSIRKGLAVLGIALMDSPNGTTWRPTIPLPLQEQ 607
>gi|215697564|dbj|BAG91558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/402 (62%), Positives = 305/402 (75%), Gaps = 12/402 (2%)
Query: 29 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 88
MA+L CLPP+ +PRVSDH++QI +MI QII+NDCAY + GDV+F+VE P YG LSG++L
Sbjct: 1 MANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKL 60
Query: 89 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 148
++NRAGERVAVD RK+NPADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 61 DDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 149 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 208
FDIHGGG DLIFPHHENEIAQS AAC DS+++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 180
Query: 209 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKT 267
TE YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTLQDCE + Q + G
Sbjct: 181 TELYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDP 240
Query: 268 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQ 326
+N +CI KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 241 LPVN--TTNCIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-- 295
Query: 327 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 386
+ESL +E +++ VL +LGLL P +Y E LQQL++KAL+RA +TEE VLQ IEER +
Sbjct: 296 ---LESLSAMEEKIRMVLSVLGLL-PSSYYEALQQLREKALRRASMTEEQVLQKIEERTS 351
Query: 387 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQ 427
ARK K + KSD+IR +L GIALMD T WRP V L EQ
Sbjct: 352 ARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQ 393
>gi|145330001|ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 401
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/395 (60%), Positives = 297/395 (75%), Gaps = 6/395 (1%)
Query: 29 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 88
M LQCL P+ QPRVSDH+ QI D+I QI++N AY V+GD++F+V+K P YG+LSG++L
Sbjct: 1 MEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKL 60
Query: 89 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 148
E+NRAGERVAVD+RK++PADFALWKAAK GEP W+SPWG GRPGWHIECSAMSA YL
Sbjct: 61 EDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYS 120
Query: 149 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 208
FDIHGGG+DL+FPHHENEIAQSCAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 121 FDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQV 180
Query: 209 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 268
+ YHPLALR FL+ HYRSP+NYS L+SAS+ +FYIYQTL DCE AL +
Sbjct: 181 IDLYHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENG 240
Query: 269 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 328
+ IN R EF A MSDDL T L A + LK IN ++ K K+ +++
Sbjct: 241 SVPSDTLTSINTFRTEFVASMSDDLLTPVTL-AAMSEPLKTINDLIHTRKGKKQARRE-- 297
Query: 329 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 388
ESL+ +E +++VL ILGL+P +YSEVL+QLK+KALKRA L EEDVLQ ++ER AR
Sbjct: 298 --ESLKALETTIRDVLTILGLMPT-SYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDAR 354
Query: 389 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 423
KNK++ +SD IR DL + GIALMD + T WRP +
Sbjct: 355 KNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAI 389
>gi|224031007|gb|ACN34579.1| unknown [Zea mays]
Length = 400
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/405 (60%), Positives = 304/405 (75%), Gaps = 15/405 (3%)
Query: 29 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 88
MA+LQCLPP+ +PRVSDH+++I +MI QI++N CAYVV GDV+F+V+ P YG LSG++L
Sbjct: 1 MANLQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKL 60
Query: 89 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 148
++NRAGERVAVD RKRNPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 61 DDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 149 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 208
FDIHGGG DLIFPHHENEIAQS AAC DS ++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 180
Query: 209 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 268
E YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTL+DCE +H ++
Sbjct: 181 IEMYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCE----EICQHQQSN 236
Query: 269 RINPAAEDCIN---KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQ 324
NP + +N KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 237 TGNPLPANTLNYIQKLHDEFETSMSDDLHTS-VALAAMSEPLKVMNDLLHTRKGKKQDKR 295
Query: 325 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 384
+ESL +E +++ VL +LGLL P +Y E LQQL+DKAL+RA +TEE V+Q IEER
Sbjct: 296 -----LESLSALEEKIRVVLSVLGLL-PSSYHEALQQLRDKALRRASITEELVVQKIEER 349
Query: 385 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQ 429
AARK K + KSD+IR +L GIALMD T WRP + + +E+
Sbjct: 350 TAARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSLPLPEEE 394
>gi|343172444|gb|AEL98926.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/405 (62%), Positives = 313/405 (77%), Gaps = 7/405 (1%)
Query: 24 EYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGR 82
E+L DM DLQCLPP++QP VSDH+ +I +MI ++I D AY ++ GDV+F+V+K YG
Sbjct: 1 EFLKDMDDLQCLPPSHQPCVSDHIREIIEMIEELIKKDSAYSLDDGDVYFSVDKFERYGL 60
Query: 83 LSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSA 142
LS ++LE+NRAGERV+VD RKRNPADFALWK+AK GE SW SPWG GRPGWHIECSAMSA
Sbjct: 61 LSNRKLEDNRAGERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRPGWHIECSAMSA 120
Query: 143 HYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNF 202
YL+ FDIHGGGIDLIFPHHENE+AQSCAAC ++NV YW+HNG V N EKMSKS GN+
Sbjct: 121 KYLTYSFDIHGGGIDLIFPHHENELAQSCAACNEANVGYWVHNGFVNINGEKMSKSTGNY 180
Query: 203 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ 262
FTIRQ+T+RYHPLA+R+FL+S +Y SP+N+S+ Q D ASDAV+ IYQTL DC AL PFQ
Sbjct: 181 FTIRQVTDRYHPLAVRYFLLSMNYGSPVNFSLYQTDLASDAVYRIYQTLLDCSDALKPFQ 240
Query: 263 ----EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 318
E+ K + P +L RMSDDL+ + IL G+ Q+ALK IN+ LN LK
Sbjct: 241 ENVNENAKASSKKP-VNLLTLRLLMILRKRMSDDLHIADILKGSLQEALKSINNELNGLK 299
Query: 319 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 378
KKQ +Q+ L+ ++SL ++E E++ VL +LGLL P YSEVL QLK+KAL RAE+TE+DV
Sbjct: 300 KKQKQQKLLA-VQSLTELEAEIRYVLEVLGLLSPAPYSEVLHQLKEKALLRAEMTEDDVS 358
Query: 379 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 423
QLIEERA ARKNK+F KSD+IR LT KGI+LMD+ T WRPCV
Sbjct: 359 QLIEERAMARKNKEFLKSDEIRRQLTAKGISLMDLPTGTTWRPCV 403
>gi|343172442|gb|AEL98925.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/405 (62%), Positives = 314/405 (77%), Gaps = 7/405 (1%)
Query: 24 EYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGR 82
E+L DM DLQCLPP++QP VSDH+++I +MI ++IN D AY ++ GDV+F+V+K YG
Sbjct: 1 EFLKDMDDLQCLPPSHQPCVSDHIKEIIEMIEELINKDSAYSLDDGDVYFSVDKFERYGL 60
Query: 83 LSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSA 142
LS ++LE+NRAGERV+VD RKRNPADFALWK+AK GE SW SPWG GRPGWHIECSAMSA
Sbjct: 61 LSNRKLEDNRAGERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRPGWHIECSAMSA 120
Query: 143 HYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNF 202
YL+ FDIHGGGIDLIFPHHENE+AQSCAAC ++NV YW+HNG V N EKMSKS GN+
Sbjct: 121 KYLTYAFDIHGGGIDLIFPHHENELAQSCAACNEANVGYWVHNGFVNINGEKMSKSTGNY 180
Query: 203 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ 262
FTIRQ+T+RYHPLA+R+FL+S +Y SP+N+S+ Q D ASDA++ IYQTL DC AL PFQ
Sbjct: 181 FTIRQVTDRYHPLAVRYFLLSMNYGSPVNFSLYQTDLASDAIYRIYQTLLDCSDALKPFQ 240
Query: 263 ----EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 318
E+ K + P +L RMSDDL+ + IL G+ Q+ALK IN LN LK
Sbjct: 241 ENVNENAKASSKKP-VNLLTLRLLMILRKRMSDDLHIADILKGSLQEALKSINIELNGLK 299
Query: 319 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 378
KKQ +Q+ L+ ++SL ++E E++ VL +LGLL P YSEVL QLK+KAL RAE+TE+DV
Sbjct: 300 KKQKQQKLLA-VQSLTELEAEIRYVLEVLGLLSPAPYSEVLDQLKEKALLRAEMTEDDVS 358
Query: 379 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 423
QLIEERA ARKNK+F KSD+IR LT KGI+LMD+ T WRPCV
Sbjct: 359 QLIEERAMARKNKEFLKSDEIRRQLTAKGISLMDLPTGTTWRPCV 403
>gi|108706130|gb|ABF93925.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706131|gb|ABF93926.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|218192068|gb|EEC74495.1| hypothetical protein OsI_09969 [Oryza sativa Indica Group]
gi|222624173|gb|EEE58305.1| hypothetical protein OsJ_09367 [Oryza sativa Japonica Group]
Length = 528
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/443 (55%), Positives = 308/443 (69%), Gaps = 23/443 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE SLS+R+ E+L+DMA LQCLPPT +PRV+DH+E I ++IT+I+ N
Sbjct: 82 KIIKRANEAGETVTSLSSRFINEFLLDMAQLQCLPPTCEPRVTDHIEHIIELITKIMENG 141
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +EGDV+F+V+ P Y LSG++L++N AG RVAVD+RKRNPADFALWKAAK GEP
Sbjct: 142 KAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVDTRKRNPADFALWKAAKEGEPF 201
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA +S V
Sbjct: 202 WDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPESEVKC 261
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V +++KMSKS NFFTIR I + YHP+ALR FL+ HYR +N+S L+ AS
Sbjct: 262 WMHNGFVNKDDQKMSKSDKNFFTIRDIIDLYHPMALRFFLMRTHYRGDVNHSDKALEIAS 321
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D V+YIYQTL DCE LS ++ + + +D +NK EF M+DDL T+ +L G
Sbjct: 322 DRVYYIYQTLYDCEEVLSQYRGENISVPVPVEEQDMVNKHHSEFLESMADDLRTTDVLDG 381
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQL----------------------SLIESLRKIENE 339
F D LK INS+LN KK Q K +Q I+++ +E E
Sbjct: 382 -FTDLLKAINSNLNDFKKLQQKLEQQKKKQQQQKQQKQKQQQAQKQPEEYIQAMFALETE 440
Query: 340 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 399
+K + ILGL+PP + +E L+QLKDKALKRA LTEE + + IE+R AARKNK F SDQI
Sbjct: 441 IKNKISILGLMPPSSLAEALKQLKDKALKRAGLTEELLQEQIEQRTAARKNKQFDVSDQI 500
Query: 400 RADLTRKGIALMDMGKETIWRPC 422
R L KGIALMD T+WRPC
Sbjct: 501 RKQLGSKGIALMDEPTGTVWRPC 523
>gi|226531133|ref|NP_001146887.1| LOC100280495 [Zea mays]
gi|195604736|gb|ACG24198.1| cysteinyl-tRNA synthetase [Zea mays]
gi|413945620|gb|AFW78269.1| cysteinyl-tRNA synthetase [Zea mays]
Length = 556
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/443 (55%), Positives = 309/443 (69%), Gaps = 22/443 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE SLS+R+ E+L+DM +LQCLPPT +PRV++H+E I ++IT+I+ ND
Sbjct: 104 KIIKRANERGETVTSLSSRFINEFLLDMTELQCLPPTCEPRVTEHIEHIIELITKIMEND 163
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +EGDV+F+VE P Y LSG++ + N+AG RVA D+RKRNPADFALWKAAK GEP
Sbjct: 164 KAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDTRKRNPADFALWKAAKEGEPF 223
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA +S V
Sbjct: 224 WDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIFPHHENELAQSRAAYPESEVKC 283
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V +++KM+KS NFFTIR IT YHPLALR FL+ HYRS +N+S L+ AS
Sbjct: 284 WMHNGFVNKDDKKMAKSDNNFFTIRDITALYHPLALRFFLMRTHYRSDVNHSDQALEIAS 343
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D V+YI+QTL DCE L+ ++E G + + ++ I+K EF MS+DL T+ +L
Sbjct: 344 DRVYYIFQTLYDCEEVLATYREEGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTDVLDR 403
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLS----------------------LIESLRKIENE 339
F + LK INSSLN LKK Q K +Q I++L +E E
Sbjct: 404 CFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIALEIE 463
Query: 340 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 399
+K L ILGL+P + +EVL+QLKDKALKRA LTEE + + IE+R ARKNK F SD I
Sbjct: 464 LKNKLSILGLMPSSSLAEVLKQLKDKALKRAGLTEEKLQEQIEQRNVARKNKQFEISDGI 523
Query: 400 RADLTRKGIALMDMGKETIWRPC 422
R +L KGIALMD T+WRPC
Sbjct: 524 RKNLATKGIALMDEPSGTVWRPC 546
>gi|413945619|gb|AFW78268.1| hypothetical protein ZEAMMB73_967684 [Zea mays]
Length = 568
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/455 (54%), Positives = 310/455 (68%), Gaps = 34/455 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE SLS+R+ E+L+DM +LQCLPPT +PRV++H+E I ++IT+I+ ND
Sbjct: 104 KIIKRANERGETVTSLSSRFINEFLLDMTELQCLPPTCEPRVTEHIEHIIELITKIMEND 163
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +EGDV+F+VE P Y LSG++ + N+AG RVA D+RKRNPADFALWKAAK GEP
Sbjct: 164 KAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDTRKRNPADFALWKAAKEGEPF 223
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA +S V
Sbjct: 224 WDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIFPHHENELAQSRAAYPESEVKC 283
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIR------------QITERYHPLALRHFLISAHYRSP 229
WMHNG V +++KM+KS NFFTIR QIT YHPLALR FL+ HYRS
Sbjct: 284 WMHNGFVNKDDKKMAKSDNNFFTIRDLSLEVITVVFVQITALYHPLALRFFLMRTHYRSD 343
Query: 230 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 289
+N+S L+ ASD V+YI+QTL DCE L+ ++E G + + ++ I+K EF M
Sbjct: 344 VNHSDQALEIASDRVYYIFQTLYDCEEVLATYREEGISLSVPFEEQNLIDKHHSEFLKYM 403
Query: 290 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--------------------- 328
S+DL T+ +L F + LK INSSLN LKK Q K +Q
Sbjct: 404 SNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQKKQQQKQQQLQKQPE 463
Query: 329 -LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 387
I++L +E E+K L ILGL+P + +EVL+QLKDKALKRA LTEE + + IE+R A
Sbjct: 464 HYIQALIALEIELKNKLSILGLMPSSSLAEVLKQLKDKALKRAGLTEEKLQEQIEQRNVA 523
Query: 388 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 422
RKNK F SD IR +L KGIALMD T+WRPC
Sbjct: 524 RKNKQFEISDGIRKNLATKGIALMDEPSGTVWRPC 558
>gi|15228880|ref|NP_191189.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|7572928|emb|CAB87429.1| cysteine-tRNA ligase [Arabidopsis thaliana]
gi|332645985|gb|AEE79506.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 489
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/421 (58%), Positives = 306/421 (72%), Gaps = 52/421 (12%)
Query: 6 RANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV 65
+A + GE PL LSNR+C+EYL+DMA LQCL PT+QPRVSDHMEQI MI +II N C Y
Sbjct: 82 KAKNCGEKPLDLSNRFCEEYLLDMAALQCLLPTHQPRVSDHMEQIIKMIEKIIENGCGYA 141
Query: 66 VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSP 125
V GDVFF+V+KSP+YG+LSGQRL++ +AG+RVAVDSRKRNPADFAL KAAK+GEPSW+SP
Sbjct: 142 VGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRNPADFALRKAAKSGEPSWESP 201
Query: 126 WGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHN 185
WG GRPGWHIE FDIHGGG DL FPHHENEIAQ+CAAC+DS V+YW+HN
Sbjct: 202 WGHGRPGWHIE------------FDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHN 249
Query: 186 GHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVF 245
GHVTNNN KM KSL NFFTIRQI YHPLALRHFL+SA YRSPLNYSV QL+S+SDA++
Sbjct: 250 GHVTNNNVKMGKSLNNFFTIRQIAANYHPLALRHFLMSAQYRSPLNYSVSQLESSSDALY 309
Query: 246 YIYQTLQDCEVALSPFQEH-----GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+LSP++E GKT + + A++ I K++
Sbjct: 310 -----------SLSPYREEMSGDVGKTQQ-SAEAKEMIKKVK------------------ 339
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
+ALKFIN S++ LKK Q K+Q++SL+ SL ++E V+EVL +LGLL +Y E+L+
Sbjct: 340 ----NALKFINVSISKLKKMQ-KKQRMSLVVSLVEVEKAVREVLDVLGLLTTLSYGELLK 394
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+K KAL RA + EE+VLQ IEER ARK+KDF +SD+IR L KGI L D+ +T+WR
Sbjct: 395 DMKQKALTRAGMGEEEVLQRIEERNMARKSKDFRRSDRIRELLAFKGIFLEDVPGDTVWR 454
Query: 421 P 421
P
Sbjct: 455 P 455
>gi|326503818|dbj|BAK02695.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/443 (55%), Positives = 305/443 (68%), Gaps = 23/443 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN GE SLS+R+ E+L D+A+LQCLPPT++PRV++H+E I +IT+II N
Sbjct: 119 KIIKRANQNGETVTSLSSRFITEFLADVAELQCLPPTHEPRVTEHIENIIKLITEIIKNG 178
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F+V+ P Y LSG+ L++NRAG RVAVD+RKRNPADFALWKAAK GEPS
Sbjct: 179 KAYVVDGDVYFSVDNFPEYLSLSGRILDHNRAGSRVAVDTRKRNPADFALWKAAKEGEPS 238
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA +S V
Sbjct: 239 WESPWGNGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPESEVKC 298
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + +++KMSKS+ NFFTIR I YHPLALR FL+ HY+S N+S L+ AS
Sbjct: 299 WMHNGFINIDDQKMSKSVNNFFTIRDIITLYHPLALRFFLMRTHYKSDANHSDKALEIAS 358
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D V+YI+QTL DC+ +S +E +A + + ++ F MSDDL T+ +L G
Sbjct: 359 DRVYYIFQTLYDCDEVVSLHREENTSAPVPAEEQKLVDDHHKAFLESMSDDLRTTDVLDG 418
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSL----------------------IESLRKIENE 339
F + LK IN +LN LKK Q K +Q I++L + E
Sbjct: 419 -FMELLKAINGNLNDLKKLQQKLEQQKKKQQQQKKQQQKQQRPQKQPEDHIQALNALGAE 477
Query: 340 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 399
+K L ILGL+PP +EVL+QLK+KALKRA LTEE + + IE R AAR NK F SDQI
Sbjct: 478 IKHKLSILGLMPPSPLAEVLKQLKEKALKRAGLTEESLSEQIEHRIAARNNKQFEVSDQI 537
Query: 400 RADLTRKGIALMDMGKETIWRPC 422
R +L KGIALMD T+WRPC
Sbjct: 538 RKELASKGIALMDEPTGTVWRPC 560
>gi|357114089|ref|XP_003558833.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 1 [Brachypodium
distachyon]
Length = 562
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/442 (55%), Positives = 300/442 (67%), Gaps = 23/442 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN GE SLS R+ E+L+DMA LQCLPPT +PRV++H+E I D+I +II ND
Sbjct: 120 KIIDRANKAGETVTSLSTRFINEFLIDMAKLQCLPPTCEPRVTEHIEHIIDLIAEIIKND 179
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV +GDVFF+++ P Y LSG+ L++NR G RVAVD RKRN DFALWKAAK GEP
Sbjct: 180 KAYV-DGDVFFSIDSFPEYNSLSGRNLDDNRPGSRVAVDPRKRNRNDFALWKAAKEGEPF 238
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA DS V
Sbjct: 239 WESPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPDSEVKC 298
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V ++EKMSKSL NFF+IR+I YHPLALR FL+ HY+S +N+S L+ AS
Sbjct: 299 WMHNGFVNKDDEKMSKSLNNFFSIREIITLYHPLALRFFLMRTHYKSDVNHSDKALEIAS 358
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D V+YIYQTL DC+ LS ++E + + + +++ F MSDDL T+ +L G
Sbjct: 359 DRVYYIYQTLHDCDEVLSLYREENISVPVPDEEQKLVDEHHTAFLDSMSDDLRTTDVLDG 418
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSL---------------------IESLRKIENEV 340
F LK INS+LN KK Q K +Q I++L +E E+
Sbjct: 419 -FMGLLKAINSNLNDFKKLQQKLEQQKKKQQQKKQQQKQQRPQKQPEDHIQALISLEAEI 477
Query: 341 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 400
K L ILGL+PP + EVL++LK+KALKRA LTEE + + IE+R AAR NK F SDQIR
Sbjct: 478 KNKLSILGLMPPSSLVEVLKELKEKALKRAGLTEETLREQIEQRVAARNNKQFDVSDQIR 537
Query: 401 ADLTRKGIALMDMGKETIWRPC 422
L KGIALMD T+WRPC
Sbjct: 538 KQLASKGIALMDEPTGTVWRPC 559
>gi|224031283|gb|ACN34717.1| unknown [Zea mays]
gi|413949577|gb|AFW82226.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
gi|413949578|gb|AFW82227.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
Length = 561
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/449 (54%), Positives = 305/449 (67%), Gaps = 28/449 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE SLS+++ E+L+DM +LQCLPPT +PRV++H+E I +ITQI+ N
Sbjct: 105 KIIKRANERGETVTSLSSQFINEFLLDMTELQCLPPTCEPRVTEHIEHIIKLITQIMENG 164
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +EGDV+F+VE P Y LSG++ + N+AG RVA D+RKRNPADFALWKAAK GEP
Sbjct: 165 KAYAIEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDTRKRNPADFALWKAAKEGEPF 224
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA DS V
Sbjct: 225 WDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPDSEVKC 284
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V +++KM+KS NFFTIR I YHP+ALR FL+ HYRS +N+S L+ AS
Sbjct: 285 WMHNGFVNKDDKKMAKSDNNFFTIRDIIALYHPMALRFFLMRTHYRSDVNHSDQALEIAS 344
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D V+YIYQTL DCE L+ ++E G + + ++ I K EF MS+DL T+ +L
Sbjct: 345 DRVYYIYQTLYDCEEVLATYREEGTSLPVPSEEQNLIGKHHSEFLKHMSNDLKTTDVLDR 404
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLS----------------------------LIESL 333
F + LK INSSLN LKK Q K +Q I++L
Sbjct: 405 CFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQKKQQQQKQQQQKQQQLQKQPEDYIQAL 464
Query: 334 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 393
+E E+K L ILGL+P + +EVL+QLKDK+LKRA LTEE + + IE+R ARKNK F
Sbjct: 465 IALETELKNKLSILGLMPSSSLAEVLKQLKDKSLKRAGLTEEQLQEQIEQRNVARKNKQF 524
Query: 394 SKSDQIRADLTRKGIALMDMGKETIWRPC 422
SD IR +L KGIALMD T+WRPC
Sbjct: 525 EISDGIRKNLATKGIALMDEPSGTVWRPC 553
>gi|302803761|ref|XP_002983633.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
gi|300148470|gb|EFJ15129.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
Length = 502
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/442 (53%), Positives = 311/442 (70%), Gaps = 23/442 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RANDLG++P+ LSNR+C E+ DMA L+CL P+ +PRVS +++QI MI+QI+ N
Sbjct: 66 KIIKRANDLGDDPIELSNRFCDEFHRDMASLRCLAPSLEPRVSRNIDQIIKMISQILENG 125
Query: 62 CAYVVE-GDVFFAVEK-----SPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAA 115
YV++ GDV+F+++K +YGRLSG++L++NRAGERVAVD RK NP DF LWKA
Sbjct: 126 YGYVLDNGDVYFSLDKFVPAFPDSYGRLSGRKLDDNRAGERVAVDDRKLNPGDFVLWKAN 185
Query: 116 KAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ 175
GEPSW+SPWG GRPGWHIECSAMS L S FDIHGGG+DLIFPHHENEI QS AAC
Sbjct: 186 --GEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPHHENEIVQSRAACH 243
Query: 176 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVL 235
+SNV+YWMHNG VT ++EKMSKSLGNFFTIR++ E YHPLALR FL+ HYRSP+NYS
Sbjct: 244 ESNVTYWMHNGFVTVDSEKMSKSLGNFFTIREVFELYHPLALRWFLLCTHYRSPINYSES 303
Query: 236 QLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNT 295
QL +AS +FY+YQTL D + + Q+ K+ ++ A + LR + ++DDLNT
Sbjct: 304 QLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKAAEIAKALRLSLRSSLADDLNT 363
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG------- 348
+ GA + LK +N L+ K ++ K S SL + EV++ L +LG
Sbjct: 364 P-VTIGALSEPLKLMNELLHSKKGRKDK----SRYSSLDLLRLEVEQALEVLGFSVADYS 418
Query: 349 --LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 406
L+ S+VL++L+ KALKRA LTE+++L I ERAAAR +KDF KSD+IR L+
Sbjct: 419 QALITQLFLSQVLEELRSKALKRAGLTEDELLLQIHERAAARASKDFGKSDEIRDKLSSL 478
Query: 407 GIALMD-MGKETIWRPCVLVEQ 427
GI+LMD G ET+WRP V E+
Sbjct: 479 GISLMDGGGDETLWRPSVTSEE 500
>gi|218184692|gb|EEC67119.1| hypothetical protein OsI_33924 [Oryza sativa Indica Group]
Length = 523
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/423 (53%), Positives = 302/423 (71%), Gaps = 2/423 (0%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI D+IT+I++N
Sbjct: 93 KIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNG 152
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +EGDV+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFALWK+AK GEPS
Sbjct: 153 KAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPS 212
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS AA +S V
Sbjct: 213 WESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPESEVKC 272
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V + +KM+K+ NFFTIR I YHP+ALR FL+ HYRS +N+S L AS
Sbjct: 273 WMHNGFVNKDGQKMAKADKNFFTIRDIISLYHPMALRLFLMRTHYRSDVNHSDTALQFAS 332
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++YIYQTL D E +S + EH I + I + F +MSDDL+T+ L
Sbjct: 333 GRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENHSNFLEKMSDDLHTTAALDH 392
Query: 302 --AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
Q L+ + +++Q +++ I++L ++NEV + L ILGL+P + +E L
Sbjct: 393 LMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMPMSSLAEAL 452
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+QLKDKALKRA +T E + Q+IE+R ARKNKDF++SD+IR +L+ GIALMD T+W
Sbjct: 453 KQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALMDEPTGTLW 512
Query: 420 RPC 422
RP
Sbjct: 513 RPS 515
>gi|108706129|gb|ABF93924.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706132|gb|ABF93927.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 420
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/416 (56%), Positives = 287/416 (68%), Gaps = 23/416 (5%)
Query: 29 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 88
MA LQCLPPT +PRV+DH+E I ++IT+I+ N AY +EGDV+F+V+ P Y LSG++L
Sbjct: 1 MAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKL 60
Query: 89 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 148
++N AG RVAVD+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL
Sbjct: 61 DHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHV 120
Query: 149 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 208
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KMSKS NFFTIR I
Sbjct: 121 FDIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDI 180
Query: 209 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 268
+ YHP+ALR FL+ HYR +N+S L+ ASD V+YIYQTL DCE LS ++ +
Sbjct: 181 IDLYHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISV 240
Query: 269 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL- 327
+ +D +NK EF M+DDL T+ +L G F D LK INS+LN KK Q K +Q
Sbjct: 241 PVPVEEQDMVNKHHSEFLESMADDLRTTDVLDG-FTDLLKAINSNLNDFKKLQQKLEQQK 299
Query: 328 ---------------------SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKA 366
I+++ +E E+K + ILGL+PP + +E L+QLKDKA
Sbjct: 300 KKQQQQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKA 359
Query: 367 LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 422
LKRA LTEE + + IE+R AARKNK F SDQIR L KGIALMD T+WRPC
Sbjct: 360 LKRAGLTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPTGTVWRPC 415
>gi|302817808|ref|XP_002990579.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
gi|300141747|gb|EFJ08456.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
Length = 492
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/433 (54%), Positives = 306/433 (70%), Gaps = 15/433 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RANDLG++P+ LSNR+C E+ DMA L+CL P+ +PRVS +++QI MI+QI+ N
Sbjct: 66 KIIKRANDLGDDPIELSNRFCDEFRRDMASLRCLAPSLEPRVSRNIDQIIKMISQILENG 125
Query: 62 CAYVVE-GDVFFAVEKS----PN-YGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAA 115
YV++ GDV+F+++K P+ YGRLSG++L++NRAGERVAVD RK NP DF LWKA
Sbjct: 126 YGYVLDNGDVYFSLDKFVPAFPDCYGRLSGRKLDDNRAGERVAVDDRKLNPGDFVLWKAN 185
Query: 116 KAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ 175
GEPSW+SPWG GRPGWHIECSAMS L S FDIHGGG+DLIFPHHENEI QS AAC
Sbjct: 186 --GEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPHHENEIVQSRAACH 243
Query: 176 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVL 235
+SN++YWMHNG VT ++EKMSKSLGNFFTIR++ E YHPLALR FL+ HYRSP+NYS
Sbjct: 244 ESNITYWMHNGFVTVDSEKMSKSLGNFFTIREVFELYHPLALRWFLLCTHYRSPINYSES 303
Query: 236 QLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNT 295
QL +AS +FY+YQTL D + + Q+ K+ ++ A + LR + ++DDLNT
Sbjct: 304 QLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKAAENAKALRLSLRSSLADDLNT 363
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ GA + LK +N L+ + ++ K S SL + EV++ L +LG Y
Sbjct: 364 P-VTIGALSEPLKLMNELLHSKRGRKDK----SRYSSLDLLRLEVEQALEVLG-FSVADY 417
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD-MG 414
S+ L KALKRA LTE+++L I ERAAAR +KDF KSD+IR L+ GI+LMD G
Sbjct: 418 SQALFLPTCKALKRAGLTEDELLLQIHERAAARASKDFGKSDEIRDKLSSLGISLMDGGG 477
Query: 415 KETIWRPCVLVEQ 427
ET+WRP V E+
Sbjct: 478 DETLWRPSVTSEE 490
>gi|357114091|ref|XP_003558834.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 2 [Brachypodium
distachyon]
Length = 548
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/430 (54%), Positives = 292/430 (67%), Gaps = 13/430 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN GE SLS R+ E+L+DMA LQCLPPT +PRV++H+E I D+I +II ND
Sbjct: 120 KIIDRANKAGETVTSLSTRFINEFLIDMAKLQCLPPTCEPRVTEHIEHIIDLIAEIIKND 179
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV +GDVFF+++ P Y LSG+ L++NR G RVAVD RKRN DFALWKAAK GEP
Sbjct: 180 KAYV-DGDVFFSIDSFPEYNSLSGRNLDDNRPGSRVAVDPRKRNRNDFALWKAAKEGEPF 238
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA DS V
Sbjct: 239 WESPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPDSEVKC 298
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V ++EKMSKSL NFF+IR+I YHPLALR FL+ HY+S +N+S L+ AS
Sbjct: 299 WMHNGFVNKDDEKMSKSLNNFFSIREIITLYHPLALRFFLMRTHYKSDVNHSDKALEIAS 358
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
D V+YIYQTL DC+ LS ++E + + + +++ F MSDDL T+ +L G
Sbjct: 359 DRVYYIYQTLHDCDEVLSLYREENISVPVPDEEQKLVDEHHTAFLDSMSDDLRTTDVLDG 418
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSL---------IESLRKIENEVKEVLRILGLLPP 352
K++Q KQQQ I++L +E E+K L ILGL+PP
Sbjct: 419 FMGLLKLQQKLEQQKKKQQQKKQQQKQQRPQKQPEDHIQALISLEAEIKNKLSILGLMPP 478
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
S ++++LK+KALKRA LTEE + + IE+R AAR NK F SDQIR L KGIALMD
Sbjct: 479 ---SSLVEELKEKALKRAGLTEETLREQIEQRVAARNNKQFDVSDQIRKQLASKGIALMD 535
Query: 413 MGKETIWRPC 422
T+WRPC
Sbjct: 536 EPTGTVWRPC 545
>gi|297610616|ref|NP_001064785.2| Os10g0463100 [Oryza sativa Japonica Group]
gi|22758318|gb|AAN05522.1| putative cysteinyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|255679472|dbj|BAF26699.2| Os10g0463100 [Oryza sativa Japonica Group]
Length = 520
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/423 (53%), Positives = 300/423 (70%), Gaps = 5/423 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI D+IT+I++N
Sbjct: 93 KIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNG 152
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +EGDV+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFALWK+AK GEPS
Sbjct: 153 KAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPS 212
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS AA +S V
Sbjct: 213 WESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPESEVKC 272
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V + +KM+K+ NFFTIR I YHP+ALR FL+ HYRS +N+S L AS
Sbjct: 273 WMHNGFVNKDGQKMAKADKNFFTIRDIISLYHPMALRLFLMRTHYRSDVNHSDTALQFAS 332
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++YIYQTL D E +S + EH I + I + R F +MSDDL+T+ L
Sbjct: 333 GRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLHTTAALDH 392
Query: 302 --AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
Q L+ + +++Q +++ I++L ++NEV + L ILGL+P S +
Sbjct: 393 LMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMP---MSSLA 449
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+QLKDKALKRA +T E + Q+IE+R ARKNKDF++SD+IR +L+ GIALM T+W
Sbjct: 450 EQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALMGEPTGTLW 509
Query: 420 RPC 422
RP
Sbjct: 510 RPS 512
>gi|222612964|gb|EEE51096.1| hypothetical protein OsJ_31805 [Oryza sativa Japonica Group]
Length = 561
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/423 (53%), Positives = 300/423 (70%), Gaps = 5/423 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI D+IT+I++N
Sbjct: 134 KIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNG 193
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +EGDV+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFALWK+AK GEPS
Sbjct: 194 KAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPS 253
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS AA +S V
Sbjct: 254 WESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPESEVKC 313
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V + +KM+K+ NFFTIR I YHP+ALR FL+ HYRS +N+S L AS
Sbjct: 314 WMHNGFVNKDGQKMAKADKNFFTIRDIISLYHPMALRLFLMRTHYRSDVNHSDTALQFAS 373
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++YIYQTL D E +S + EH I + I + R F +MSDDL+T+ L
Sbjct: 374 GRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLHTTAALDH 433
Query: 302 --AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
Q L+ + +++Q +++ I++L ++NEV + L ILGL+P S +
Sbjct: 434 LMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMP---MSSLA 490
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+QLKDKALKRA +T E + Q+IE+R ARKNKDF++SD+IR +L+ GIALM T+W
Sbjct: 491 EQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALMGEPTGTLW 550
Query: 420 RPC 422
RP
Sbjct: 551 RPS 553
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 48/58 (82%)
Query: 1 MQIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQII 58
+II+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI D+IT+II
Sbjct: 79 FEIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKII 136
>gi|242036957|ref|XP_002465873.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
gi|241919727|gb|EER92871.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
Length = 466
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/417 (55%), Positives = 287/417 (68%), Gaps = 23/417 (5%)
Query: 29 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 88
MA LQCLPPT +PRV++H+E I ++IT+II N Y +EGDV+F+V+ P Y LSG++L
Sbjct: 1 MAALQCLPPTREPRVTEHIEHIIELITKIIQNGHGYAIEGDVYFSVDSFPEYLLLSGRKL 60
Query: 89 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 148
+ NRAGERVAVD+RKRNPADFALWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL
Sbjct: 61 DQNRAGERVAVDTRKRNPADFALWKSAKEGEPSWESPWGHGRPGWHIECSAMSAHYLGHV 120
Query: 149 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 208
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KMSKS NFFTIR I
Sbjct: 121 FDIHGGGRDLIFPHHENELAQSRAAYPESEVICWMHNGFVNKDDQKMSKSENNFFTIRDI 180
Query: 209 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 268
YHP+ALR+FLI HYRS +N+S ++ ASD V+YIY+TL DCE LS + E G +
Sbjct: 181 ISLYHPMALRYFLIRTHYRSDVNHSDKAIEKASDRVYYIYKTLYDCEEMLSKYHEEGISV 240
Query: 269 RINPAAEDCINKLRDEFHARMSDDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQ 326
+ ++ +N+ R F MSDDL T+ +L G D LK INS++N LKK Q K +Q
Sbjct: 241 PVPAEEQNLVNRHRKAFLDNMSDDLKTTDVLDGEDGLTDLLKAINSNMNDLKKLQQKLEQ 300
Query: 327 L---------------------SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDK 365
I+ L +E E+K+ L +LGL+PP + SEVL QLKDK
Sbjct: 301 QQKKQQQKKQQQKQQQTQKQPEDYIQGLIALETEIKDKLSVLGLMPPSSLSEVLNQLKDK 360
Query: 366 ALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 422
ALKRA LTEE + + IE+R ARKNK F SD+IR L GI+LMD T WRPC
Sbjct: 361 ALKRANLTEEQLQEQIEQRTVARKNKQFEVSDEIRKHLATLGISLMDEPTGTSWRPC 417
>gi|357140592|ref|XP_003571849.1| PREDICTED: LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase-like
[Brachypodium distachyon]
Length = 532
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/453 (49%), Positives = 298/453 (65%), Gaps = 37/453 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ GE +LS+R+ E+L DM LQCLPPT++PRV+DH++QI D+IT+I D
Sbjct: 77 KIIRRANEAGETATNLSSRFIDEFLHDMVQLQCLPPTHEPRVTDHIKQIIDLITKIKGKD 136
Query: 62 CAYVVEGD-VFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV+EG+ V+F+V+ P Y LSG++LE+N G RVA+D+RKRNPADFALWK+AK GEP
Sbjct: 137 KAYVIEGEGVYFSVDNFPEYLSLSGRKLEHNLPGSRVAIDTRKRNPADFALWKSAKDGEP 196
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAMS HYL FDIHGGG DLIFPHHENE+AQS AA S V
Sbjct: 197 FWESPWGRGRPGWHIECSAMSEHYLGQLFDIHGGGKDLIFPHHENELAQSRAANSKSEVK 256
Query: 181 Y--WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
WMHNG V NN +KM+K NFFTI I YHP+ALR FL+ HYRS +N S L+
Sbjct: 257 LECWMHNGFVNNNGQKMAKPDKNFFTI-DIISLYHPMALRLFLMRTHYRSDVNQSDTALE 315
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
AS V+YIYQTLQD + +S + + + + ++K +EF M++DL+T
Sbjct: 316 FASGRVYYIYQTLQDSQEVISLYCDDKLDFPVPTGDQAVVDKNHEEFLKHMANDLHTK-- 373
Query: 299 LTGAFQDALK---FINSSLNMLKKKQPK--------------------------QQQLSL 329
GA + +K IN++L+ LKK Q K +Q
Sbjct: 374 --GALDELMKPIXAINNNLSDLKKLQQKLEQEKKKQAVKKQQQQQTEEGKQQAQKQTGHY 431
Query: 330 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 389
+++L + EV L ILGL+P + +E +++LKDKALKRA ++EE++ Q+I +R RK
Sbjct: 432 VQALVALHGEVTSKLSILGLMPXPSLAEAVKELKDKALKRAGMSEEELHQVIXQRTVTRK 491
Query: 390 NKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 422
NKDF++SD+IR L+ +GIALMD T+W+P
Sbjct: 492 NKDFAESDRIRTVLSARGIALMDEPTGTVWKPA 524
>gi|413919531|gb|AFW59463.1| hypothetical protein ZEAMMB73_732444 [Zea mays]
Length = 397
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/387 (55%), Positives = 263/387 (67%), Gaps = 22/387 (5%)
Query: 58 INNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKA 117
+ ND AY +EGDV+F+VE P Y LSG++ + N+AG RVA D+RKRNPADFALWKAAK
Sbjct: 1 MENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDTRKRNPADFALWKAAKE 60
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA +S
Sbjct: 61 GEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIFPHHENELAQSRAAYPES 120
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V WMHNG V +++KM+KS NFFTIR IT YHPLALR FL+ HYRS +N+S L
Sbjct: 121 EVKCWMHNGFVNKDDKKMAKSDNNFFTIRDITALYHPLALRFFLMRTHYRSDVNHSDQAL 180
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
+ ASD V+YI+QTL DCE L+ ++E G + + ++ I+K EF MS+DL T+
Sbjct: 181 EIASDRVYYIFQTLYDCEEVLATYREEGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTD 240
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLS----------------------LIESLRK 335
+L F + LK INSSLN LKK Q K +Q I++L
Sbjct: 241 VLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIA 300
Query: 336 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 395
+E E+K L ILGL+P + +EVL+QLKDKALKRA LTEE + + IE+R ARKNK F
Sbjct: 301 LEIELKNKLSILGLMPSSSLAEVLKQLKDKALKRAGLTEEKLQEQIEQRNVARKNKQFEI 360
Query: 396 SDQIRADLTRKGIALMDMGKETIWRPC 422
SD IR +L KGIALMD T+WRPC
Sbjct: 361 SDGIRKNLATKGIALMDEPSGTVWRPC 387
>gi|110289208|gb|AAP54161.2| tRNA synthetase class I family protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 491
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/423 (49%), Positives = 281/423 (66%), Gaps = 34/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ LSLS+R+ E+ DM +LQCLPPT++PRV+ H+EQI D+IT+I++N
Sbjct: 93 KIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNG 152
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +EGDV+F+V+ P+Y LSG++++ NR G RVAVD+RKRNPADFALWK+AK GEPS
Sbjct: 153 KAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPS 212
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMSAHYL + FDIHGGG DLIFPHHENE+AQS AA +S
Sbjct: 213 WESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPES---- 268
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
+I YHP+ALR FL+ HYRS +N+S L AS
Sbjct: 269 -------------------------EIISLYHPMALRLFLMRTHYRSDVNHSDTALQFAS 303
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++YIYQTL D E +S + EH I + I + R F +MSDDL+T+ L
Sbjct: 304 GRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLHTTAALDH 363
Query: 302 --AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
Q L+ + +++Q +++ I++L ++NEV + L ILGL+P S +
Sbjct: 364 LMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMP---MSSLA 420
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+QLKDKALKRA +T E + Q+IE+R ARKNKDF++SD+IR +L+ GIALM T+W
Sbjct: 421 EQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALMGEPTGTLW 480
Query: 420 RPC 422
RP
Sbjct: 481 RPS 483
>gi|384251815|gb|EIE25292.1| tRNA synthetase class I (C) family protein [Coccomyxa
subellipsoidea C-169]
Length = 536
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/432 (47%), Positives = 271/432 (62%), Gaps = 16/432 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA++ GE+PL LS R+ E+ DM L CL PT +P+ +D + Q+ DMI +I+
Sbjct: 105 KIIKRASETGEDPLQLSQRFIHEFHTDMDALNCLAPTSEPKATDFISQMVDMIGRIVKAG 164
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
Y +G V+F+VE P YGRLSG+ L++NRAGERVAV++ KRNPADF LWKAAK GEP
Sbjct: 165 HGYEADGSVWFSVESVPGYGRLSGRSLDDNRAGERVAVNTTKRNPADFVLWKAAKVGEPK 224
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA---CQDSN 178
WDSPWGPGRPGWHIECSAM + DIHGGG DLI PHH+NE+ QS AA C N
Sbjct: 225 WDSPWGPGRPGWHIECSAMIRELMGPIIDIHGGGRDLIHPHHDNELVQSQAAACECDREN 284
Query: 179 -------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLN 231
V +WMH G V ++EKMSKSLGNFFTIR + + YHP+ALR FLI+ YR +N
Sbjct: 285 MLDHRDFVRWWMHLGFVNVDSEKMSKSLGNFFTIRDVLQMYHPMALRWFLINTQYRQAIN 344
Query: 232 YSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSD 291
Y+ L ASD ++YIYQTLQD E AL+ G+ + KL A + D
Sbjct: 345 YTERSLQEASDRLYYIYQTLQDAEAALTAAAAAGEQVSVATEQHSNGTKLLKSVEASLCD 404
Query: 292 DLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP 351
DLNT A + LK +N L+ K K+ + ++++ ++ + VL +LG L
Sbjct: 405 DLNTPQAFA-ALSEPLKTMNDLLHTKKGKKAGGR----LQTIATLQQALNSVLELLG-LG 458
Query: 352 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
G VL +++ +AL RA L E+DV IE RA AR KD++ +D+ RA L +GI +M
Sbjct: 459 AGDIGAVLVEMRQRALHRAGLKEQDVELSIERRAVARAAKDYASADKERAFLAERGIMIM 518
Query: 412 DMGKETIWRPCV 423
D + T+WRP +
Sbjct: 519 DGSEGTLWRPGI 530
>gi|308808270|ref|XP_003081445.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
gi|116059908|emb|CAL55967.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
Length = 661
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/435 (45%), Positives = 273/435 (62%), Gaps = 17/435 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+N+ GE +L+N++ + DM L CL PT +PR ++ ++ I I ++I
Sbjct: 233 KIIKRSNESGETCEALTNKFIDAFHEDMTALGCLRPTLEPRATECVDDIIAFIERLIAKG 292
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F+V+ P YG LSG++ ++NRAGERVAVD RK+NPADFALWK AK GEP+
Sbjct: 293 NAYEASGDVYFSVDTLPAYGALSGRKQDDNRAGERVAVDERKKNPADFALWKTAKPGEPT 352
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAAC-----QD 176
W SPWG GRPGWHIECSAM L DIHGGG DL+FPHHENE+AQS AAC D
Sbjct: 353 WTSPWGDGRPGWHIECSAMIEKMLGPTIDIHGGGQDLVFPHHENELAQSSAACGCGAHAD 412
Query: 177 SN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSV 234
N V YW+HNG V ++EKMSKSLGNFFTIR++ ++YHP LR L+ AHYR+P+NY+
Sbjct: 413 ENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLDKYHPFVLRFMLLGAHYRAPINYTQ 472
Query: 235 LQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI---NKLRDEFHARMSD 291
L+ ASD V+Y+YQTLQD + + P D + N+ + ++D
Sbjct: 473 RALEEASDRVYYLYQTLQDVRSVIRDAAVEEDATKPVPMVADALKLANETEKQVLESLND 532
Query: 292 DLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP 351
DLNT ++ L S+N + ++ + + +L+ + ++ VL +G +P
Sbjct: 533 DLNTPAVMA-----TLSAPLKSMNDFMTTKAGKKAVGRVRALQALLTSIEGVLEAVG-MP 586
Query: 352 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
G L +L+ KAL RA LTE+ +L IEER AR KDF++SD++R +L+ +GI LM
Sbjct: 587 RGEEDVFLGELRAKALHRAGLTEDALLAKIEERKKARDAKDFAESDRLRDELSARGIGLM 646
Query: 412 DMGKETIWRPCVLVE 426
D G WRP +V+
Sbjct: 647 D-GAAVAWRPVPVVD 660
>gi|145351377|ref|XP_001420057.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580290|gb|ABO98350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/436 (44%), Positives = 278/436 (63%), Gaps = 19/436 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+N+ GE +L++++ + + DMA L CL PT +PR ++ ++ I I ++I
Sbjct: 68 KIIKRSNESGETCEALTDKFIEAFHEDMAALGCLRPTLEPRATECVDDIIAFIERLIAKG 127
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F+V+ P YG LSG+ E+NRAGERVAVD RK+NPADFALWK AK GEP+
Sbjct: 128 NAYETEGDVYFSVDTLPAYGALSGRNQEDNRAGERVAVDGRKKNPADFALWKTAKPGEPT 187
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAAC-----QD 176
W SPWG GRPGWHIECSAM L DIHGGG DL+FPHHENE+AQS AAC D
Sbjct: 188 WTSPWGEGRPGWHIECSAMIEKMLGPTIDIHGGGQDLVFPHHENELAQSSAACGCGAHAD 247
Query: 177 SN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSV 234
N V YW+HNG V ++EKMSKSLGNFFTIR++ ++YHP LR L+ AHYR+P+NY+
Sbjct: 248 ENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLDKYHPFVLRFMLLGAHYRAPINYTQ 307
Query: 235 LQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS---- 290
L+ ASD V+Y+YQT+ D L + P D + KL E ++S
Sbjct: 308 RALEEASDRVYYLYQTVHDVRAILRDAAAEEPAKKPVPLVADAL-KLASEAEKQVSEALN 366
Query: 291 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 350
DD+NT ++ L S+N + ++ + + +L+ + + V+ ++ +G +
Sbjct: 367 DDMNTPGVIA-----TLSAPLKSMNDFMTTKAGKKAVGRVGALQSLLSTVEGLMEAVG-M 420
Query: 351 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
P + +L +L+ +AL RA LTE+D+L IEER AR KDF++SD++R +L+ +G+ L
Sbjct: 421 PKDEENVILAELRARALHRAGLTEDDLLAKIEERNKARDAKDFAESDRLRDELSARGVGL 480
Query: 411 MDMGKETIWRPCVLVE 426
MD G WRP +++
Sbjct: 481 MD-GSAVPWRPVPVID 495
>gi|255083368|ref|XP_002504670.1| cysteine-trna ligase [Micromonas sp. RCC299]
gi|226519938|gb|ACO65928.1| cysteine-trna ligase [Micromonas sp. RCC299]
Length = 522
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/444 (46%), Positives = 284/444 (63%), Gaps = 27/444 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE +L +R+ + D+ L CL PT +PR +DH++ I M ++I
Sbjct: 83 KIIKRANENGEECDALVDRFIAAFHEDIDALGCLRPTIEPRATDHIKDIVTMCERLIEKG 142
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+V+ P YG LSG++ E+NRAGERVAVD RK+NPADFALWKAAK GEP+
Sbjct: 143 YAYPADGDVYFSVDALPEYGSLSGRKQEDNRAGERVAVDDRKKNPADFALWKAAKPGEPT 202
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAAC------- 174
WDSPWG GRPGWHIECSAM L DIHGGG DL+FPHHENE+AQS A+C
Sbjct: 203 WDSPWGAGRPGWHIECSAMIDSILGKSIDIHGGGQDLVFPHHENELAQSTASCRCCATDG 262
Query: 175 ---QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLN 231
++ V YW+HNG V ++EKMSKSLGNFFTIR++TE+YHP ALR L+ HYR+P+N
Sbjct: 263 DEPEEPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVTEKYHPFALRWMLLGTHYRAPIN 322
Query: 232 YSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI--------NPAAE--DCINKL 281
Y+ L+ ASD ++Y+YQTL D VAL+ + A + AAE + +
Sbjct: 323 YTQRALEEASDRLYYLYQTLVDSRVALTEAEASATDAEVKGKPKPPTGVAAEGIELAVET 382
Query: 282 RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK 341
+ + ++DDLNT + + LK +N ++ K K+ + + +LR + V+
Sbjct: 383 KAAVASALTDDLNTP-LAMASLSSPLKTLNDLVSTKKGKKAVGRNV----ALRDLVKTVE 437
Query: 342 EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 401
E L +G LP +L++L+ L RA LT+ DV + + +RA AR KDF++SD+IR
Sbjct: 438 ETLEAVG-LPHEGGEGLLEELRLLTLARAGLTQADVDEAVAKRAEARAAKDFAESDRIRD 496
Query: 402 DLTRKGIALMDMGKETIWRPCVLV 425
+L KG+ALMD G + +WRP +V
Sbjct: 497 ELGAKGVALMDGGSQ-VWRPATVV 519
>gi|412992649|emb|CCO18629.1| cysteinyl-tRNA synthetase [Bathycoccus prasinos]
Length = 657
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/447 (44%), Positives = 273/447 (61%), Gaps = 30/447 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ G + L+ ++ Q + DM L CL P +PR + H+ I D+IT++I +
Sbjct: 218 KIINRANESGTSCEELTEKFIQAFHEDMEALGCLRPDLEPRATQHVGDIIDLITRLIEKN 277
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+V+ YG LSG+ E+NRAGERV VD RK+NPADFALWK AK EP
Sbjct: 278 HAYAVDGDVYFSVDSLSKYGSLSGRNQEDNRAGERVVVDGRKKNPADFALWKTAKPNEPV 337
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAAC------- 174
W+SPWG GRPGWHIECSAM L DIHGGG DL+FPHHENE+AQS AAC
Sbjct: 338 WESPWGNGRPGWHIECSAMIEKLLGPVIDIHGGGQDLVFPHHENELAQSSAACDCEIHKS 397
Query: 175 QDSN-VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYS 233
+D V YW+HNG V ++EKMSKSLGNFFTIR++ RYHP+ LR L+ AHYR+P+NY+
Sbjct: 398 EDKKFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLARYHPMVLRFMLLGAHYRAPINYT 457
Query: 234 VLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA------RINPAAEDCINKLRDEFHA 287
L+ +SD ++YIYQTL D AL E + +++P A D KL +E
Sbjct: 458 QKALEESSDRLYYIYQTLLDARAALELKDEEFRAELENSKLKLSPLAADA-KKLAEETKV 516
Query: 288 RMS----DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 343
++ DDLNT + + LK N L + ++ + + +L + +E++
Sbjct: 517 SVAQALYDDLNTP-LAIASLSGPLKTTNDFLTT----KAGKKAVGRLSALSSLVSELENT 571
Query: 344 LRILGLLPPGAY---SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 400
L ILGL P A + +L +LK ALKRA L E+D+ L+ +RA AR K+F +SD++R
Sbjct: 572 LSILGL--PTAVDKSTSILAELKALALKRAGLEEKDLEALMAQRANARAAKNFEESDRLR 629
Query: 401 ADLTRK-GIALMDMGKETIWRPCVLVE 426
+L K + G + WRP V E
Sbjct: 630 EELASKGIGLMDGGGGDDAWRPIVPAE 656
>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|171704442|sp|A1AK01.1|SYC_PELPD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 493
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 199/425 (46%), Positives = 263/425 (61%), Gaps = 15/425 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G + ++S RY + + DMA L PT +P+ +DHM I +I +I
Sbjct: 74 KIINRANQEGVDYTTISERYIEAFNQDMARLGLAKPTVEPKATDHMGGIISVIETLIAKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV++AVE P+Y RLSG+ LE+ AG RV VD RKRNP DFALWK +K GEPS
Sbjct: 134 HAYESDGDVYYAVESFPSYLRLSGRNLEDMLAGARVEVDDRKRNPMDFALWKGSKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQS AA V Y
Sbjct: 194 WDSPWGAGRPGWHIECSAMSMEYLGKTFDIHGGGKDLVFPHHENEIAQSEAANGCQFVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V N+EKMSKSLGNFFTIR++ E+Y P LR F++SAHYRSP+++S L+ A
Sbjct: 254 WMHNGFVNINSEKMSKSLGNFFTIREVLEQYDPETLRFFILSAHYRSPIDFSDQNLNDAQ 313
Query: 242 DAVFYIYQTLQDCEVALS----PFQEHGKTARINPAAEDCINKLR---DEFHARMSDDLN 294
+ IY L + A+ P Q + A + PA + KL+ F M DD N
Sbjct: 314 AGLERIYSCLAAVDGAMEGQDVPNQPV-EGAPLPPAGAELHEKLQSLISRFREAMDDDFN 372
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T+ L G +A++ N + + P L+L+ +R++ E +VL + P A
Sbjct: 373 TAQAL-GVLFEAVRATNRFMAESGDQTPA--TLALLGQVRRLFAETGDVLGLF-TSQPAA 428
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ E ++Q K + E++ +++ QLI ERAAAR N+DF + D+IR L +KGI L+D
Sbjct: 429 WLESIKQAKSDQM---EISPQEIEQLIAERAAARTNRDFKRGDEIRDLLLQKGIQLLDSP 485
Query: 415 KETIW 419
+ T W
Sbjct: 486 QGTTW 490
>gi|337286143|ref|YP_004625616.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
gi|335358971|gb|AEH44652.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
Length = 498
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 192/422 (45%), Positives = 268/422 (63%), Gaps = 12/422 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA ++G +P L+ RY + Y DM L+ L PTY+P+ ++H+ QI +I +I
Sbjct: 77 KIIKRAYEVGVSPKELAERYIKSYDEDMKALKVLRPTYEPKATEHIPQIIALIETLIKKG 136
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV +GDV+F+VEK P YG+LSG+ LE +AG R+AV +KR+P DFALWKA K GEPS
Sbjct: 137 FAYVADGDVYFSVEKFPEYGKLSGRNLEELKAGARIAVSEKKRHPLDFALWKAEKPGEPS 196
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ +YL DIHGGG+DLIFPHHENEIAQS AA V Y
Sbjct: 197 WDSPWGRGRPGWHIECSAMAMYYLGETIDIHGGGLDLIFPHHENEIAQSEAATGKPFVRY 256
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT EKMSKSLGNF TI+Q+ R+HP A+R FL+S HYRSPL+Y+ +
Sbjct: 257 WLHNGMVTVGREKMSKSLGNFVTIKQMLSRHHPEAIRLFLLSMHYRSPLDYTEKVVSDHE 316
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSHIL 299
A+ +Y+TL E L P E + A+ + I ++F + ++DDLNT+ +
Sbjct: 317 KALEGLYETLYLIE-KLRPSSEKAPENQQKNLAKISETIKNFENDFISALADDLNTARAI 375
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSE 357
G+ K +N+ L + +K + L L + + + ++ L LG+L P A+
Sbjct: 376 -GSLFSLEKALNNLLKLCARKVA-EDHLKLAKKGKTLATKLAGSL--LGILEESPEAF-- 429
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+++ + +AL L +++ +LI+ER ARK K+F K+D IR DL +KGI + D T
Sbjct: 430 -IERKRSQALLAKGLDRDEIERLIKEREEARKAKNFEKADAIRDDLAQKGIIIRDTPWGT 488
Query: 418 IW 419
W
Sbjct: 489 FW 490
>gi|303290903|ref|XP_003064738.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453764|gb|EEH51072.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/443 (44%), Positives = 273/443 (61%), Gaps = 47/443 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE +L R+ + DM+ L CLPPT +PR + H++ I + ++
Sbjct: 68 KIIKRANENGEECDALVERFIAAFHEDMSSLGCLPPTMEPRATRHVDDILRVTEALVEKG 127
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY EG DV+F+V+ P YG+LSG++LE+NRAGERVA+D RK+NPADFALWKA+K GEP
Sbjct: 128 HAYPAEGGDVYFSVDSLPTYGKLSGRKLEDNRAGERVAIDERKKNPADFALWKASKPGEP 187
Query: 121 SWDSPWGPGRPGWHIECSAM-SAHYLSSKFDIHGGGIDLIFPHHENEIAQS---CAACQD 176
SW SPWG GRPGWHIECSAM A + DIHGGG DL+FPHHENE+AQS C C D
Sbjct: 188 SWASPWGEGRPGWHIECSAMIDATFGGKSIDIHGGGQDLVFPHHENELAQSTAFCGCCDD 247
Query: 177 SN--------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 228
+ V YW+HNG V ++EKMSKSLGNFFTIR++T +Y ALR L+ HYR+
Sbjct: 248 AKDAKDAPPFVKYWVHNGFVKVDSEKMSKSLGNFFTIREVTAKYDATALRWMLLGTHYRA 307
Query: 229 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 288
+NY+ L+ ASD ++Y+YQTL + ++ A
Sbjct: 308 AINYTQRALEEASDRLYYLYQTLSEAS-----------------------DETETAVGAA 344
Query: 289 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 348
+SDDLNT + + LK +N ++ K K+ + + I +++ + V E L +G
Sbjct: 345 LSDDLNTP-LAIASLSSPLKLLNDFVSTKKGKKAQGR----IAAMKALVRAVTETLDAVG 399
Query: 349 LLPPGAYS---EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 405
L P A + +VL++L+ L RA L+ EDV + R AAR+ KDF++SD+IR +L
Sbjct: 400 L--PSAKADAVDVLERLRALTLTRAGLSREDVDAAVAARKAAREAKDFAESDRIRDELGA 457
Query: 406 KGIALMDMGKETIWRPCVLVEQE 428
KG+ALMD G + +WRP +V +E
Sbjct: 458 KGVALMDGGSQ-VWRPSPVVAEE 479
>gi|307104948|gb|EFN53199.1| hypothetical protein CHLNCDRAFT_137034 [Chlorella variabilis]
Length = 606
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/452 (45%), Positives = 267/452 (59%), Gaps = 38/452 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA GE PL+L+ R+ E+ DM L CLPP +PR ++++ + MI +II++
Sbjct: 147 KIIARAAAAGEEPLALARRFIAEFHADMELLGCLPPDLEPRATEYIPHMVAMIQRIIDHG 206
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDVFF V P YGRLSG+ E+NRAGERVAVD RKR ADFALWKAAK GEP+
Sbjct: 207 HAYAVGGDVFFDVASLPGYGRLSGRSQEDNRAGERVAVDERKRGAADFALWKAAKPGEPT 266
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAAC------- 174
W+SPWGPGRPGWHIECSAM L DIHGGG DL+FPHHENE+AQS AA
Sbjct: 267 WESPWGPGRPGWHIECSAMIREVLGEVIDIHGGGRDLVFPHHENELAQSRAASGACSCGH 326
Query: 175 -------------------QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 215
QD V YW+HNG V ++EKMSKSLGNFFTIR++ +YHP
Sbjct: 327 DHGAATASASASNGSGGGGQDEFVRYWLHNGFVNVDSEKMSKSLGNFFTIREVVAQYHPR 386
Query: 216 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 275
ALR FL+ YR P+NY+ L+ ASD VFY+YQTL D L +E
Sbjct: 387 ALRWFLVGTQYRQPINYTQRALEEASDRVFYLYQTLADMGAVLDGGEEGQAALAAARQQL 446
Query: 276 DCI------NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 329
+ L E A ++DD+NT + AF LK N ++ K K +Q
Sbjct: 447 AAPAAAASGSGLLAEVQAALTDDVNTP-LAIAAFSAPLKSANDLVHTKKGK----KQAGR 501
Query: 330 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 389
+++L + ++ L++LGL +VL +L+ ALKRA L E+++ IEERAAAR
Sbjct: 502 LQALAECYAALETCLQLLGLWAEQP-QDVLLELRQLALKRAGLGEDEIAAAIEERAAARA 560
Query: 390 NKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
KD++ +D +R L GI +MD + T W+P
Sbjct: 561 AKDYAAADVVRLRLEAAGILIMDTPQGTTWKP 592
>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|229558717|sp|B3E1P0.1|SYC_GEOLS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 487
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 193/423 (45%), Positives = 257/423 (60%), Gaps = 15/423 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G + ++++RY + DM L L PT +P+ +DH+E I +I ++I+N
Sbjct: 74 KIINRANQEGTDYRTIADRYIATFDEDMDRLGMLRPTIEPKATDHIEDIISIIQRLIDNG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+FAVE P Y +LSG+ L++ AG RV VD RKRNP DFALWK +K GEP
Sbjct: 134 HAYAVDGDVYFAVETFPAYLKLSGRNLDDMLAGARVDVDERKRNPMDFALWKGSKPGEPW 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS +L FDIHGGG DL+FPHHENEIAQS A V Y
Sbjct: 194 WESPWGKGRPGWHIECSAMSMRFLGPSFDIHGGGKDLVFPHHENEIAQSEGANGCQFVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N+EKMSKSLGNFFTIR++ E + P LR F++ AHYRSPL+YS L A
Sbjct: 254 WLHNGFVNINSEKMSKSLGNFFTIREVLELFDPETLRFFILQAHYRSPLDYSDQNLREAQ 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAA----EDCINKLRDEFHARMSDDLNTSH 297
+ IY+ L + AL E TA PA+ + + L F M DD NT+
Sbjct: 314 AGLSRIYEALAALDQAL----EKPATAIHLPASAAEFAEKVAGLLPRFREAMDDDFNTAQ 369
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L G D+++ +N L + + +E LR E+ VL + + P S+
Sbjct: 370 AL-GTLFDSIRTLNRLLA--EGGGSSSASRADLEQLRAAVTEIGAVLGLFRIKP----SD 422
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
L + + + E++ E++ LI ERAAARKNKDF +SD+IR L + I L+D + T
Sbjct: 423 WLAAREAEKARHLEISPEEIEGLIVERAAARKNKDFKRSDEIRDYLLSRDIQLVDTPQGT 482
Query: 418 IWR 420
W+
Sbjct: 483 AWK 485
>gi|108706133|gb|ABF93928.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 338
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 162/250 (64%), Positives = 197/250 (78%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE SLS+R+ E+L+DMA LQCLPPT +PRV+DH+E I ++IT+I+ N
Sbjct: 82 KIIKRANEAGETVTSLSSRFINEFLLDMAQLQCLPPTCEPRVTDHIEHIIELITKIMENG 141
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +EGDV+F+V+ P Y LSG++L++N AG RVAVD+RKRNPADFALWKAAK GEP
Sbjct: 142 KAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVDTRKRNPADFALWKAAKEGEPF 201
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA +S V
Sbjct: 202 WDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPESEVKC 261
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V +++KMSKS NFFTIR I + YHP+ALR FL+ HYR +N+S L+ AS
Sbjct: 262 WMHNGFVNKDDQKMSKSDKNFFTIRDIIDLYHPMALRFFLMRTHYRGDVNHSDKALEIAS 321
Query: 242 DAVFYIYQTL 251
D V+YIYQ L
Sbjct: 322 DRVYYIYQVL 331
>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
gi|109894913|sp|Q3J8Y9.1|SYC_NITOC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
Length = 485
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/431 (44%), Positives = 255/431 (59%), Gaps = 32/431 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ RY Q D A LQ LPP +PR ++ ME I M+ Q+++
Sbjct: 73 KIIHRANERGESIHTLTARYIQALHEDEASLQILPPDREPRATESMEAILAMVRQLLDQG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY E GD+++ V YG LSG+ LE+ RAGERV V+ K +P DF LWKAAK+GEP
Sbjct: 133 YAYQGENGDIYYDVSHFEGYGALSGRHLEDLRAGERVQVNEAKTDPLDFVLWKAAKSGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS AA V+
Sbjct: 193 AWESPWGPGRPGWHIECSAMSIQELGTHFDIHGGGQDLQFPHHENEIAQSEAATGGKFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N+EKMSKSLGNFFT+R++ E YHP LR+F++S+HYRSPLNY+ QLD+A
Sbjct: 253 YWMHNGFVRLNDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSPLNYTKQQLDTA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G + + + + R+ M DD NT L
Sbjct: 313 KAAMTRLYTALRGIPRGEDRASAQGLSWEFTDGGDPFVLRFREA----MDDDFNTPEALA 368
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
L + +LN ++ ++ SL LR + ILGLL E Q
Sbjct: 369 -----LLNEVRHALNRAREAGDTEKGQSLAVLLRSLGG-------ILGLLA----HEPEQ 412
Query: 361 QLKDK-----------ALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 409
L+D A + A L+ + + QL+ +R ARKNKD++++D+IR L +GI
Sbjct: 413 FLRDSRQVAAIPDTAAAGEEAVLSHDGIEQLVAQRTVARKNKDWAEADRIRGILKDQGIT 472
Query: 410 LMDMGKETIWR 420
L D T+WR
Sbjct: 473 LEDTAAGTLWR 483
>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|61216190|sp|Q6AJ23.1|SYC_DESPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
LSv54]
Length = 489
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/423 (43%), Positives = 262/423 (61%), Gaps = 18/423 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ G +L+ R+ E+ DM +L L P +P+ ++H++++ D+I ++++ D
Sbjct: 74 KIIARANETGVTAQALAERFIDEFHTDMDNLGTLRPDIEPKATEHIQEMIDIIQELVDKD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV++ V P YG+LSG+ +E+ +AG R++++ +KRNP DFALWKA+K GEPS
Sbjct: 134 MAYPSAGDVYYVVNSFPEYGKLSGRNIEDMQAGARISINEQKRNPMDFALWKASKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS A +
Sbjct: 194 WESPWGPGRPGWHIECSAMSRKYLGENFDIHGGGKDLIFPHHENEIAQSEGANGKPFANT 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+G VT +EKMSKSLGNF TI+ I + YHP LR F+ S YR+PL++S + + A
Sbjct: 254 WIHHGFVTIKDEKMSKSLGNFLTIKDILDHYHPEILRAFIFSTQYRNPLDFSEIAMQDAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPA---AEDC--INKLRDEFHARMSDDLNTS 296
A+ +Y+ L D Q+ K PA A+D +N + F M++D NT+
Sbjct: 314 TALVRLYECLHD-------IQQLAKGDPTLPALISAKDAAKLNSIETRFQEAMNNDFNTA 366
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
L G DA+K IN + L P + +++ + ++++ I+GLL A +
Sbjct: 367 LAL-GVLYDAIKIINRAQRALTDT-PSALDVKMLKGSMTL---IQKLAGIVGLLQEDA-N 420
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
LQQ K+K L ++TE ++ I++R AR NKD+++SD+IR L KGI L D
Sbjct: 421 LFLQQRKEKMLSGIDITEAEIESYIQQRLDARANKDWARSDEIRDILLEKGITLKDGADG 480
Query: 417 TIW 419
T W
Sbjct: 481 TGW 483
>gi|392409460|ref|YP_006446067.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
gi|390622596|gb|AFM23803.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
Length = 480
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/422 (44%), Positives = 261/422 (61%), Gaps = 22/422 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+L + L+ ++ +E+ VDM L L PT +P+ ++ + QI+ +I +++
Sbjct: 74 KIINRANELKIDWKELAEKFVREFYVDMDALGVLRPTREPKATEFIAQIQALIAKLVEGK 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV F+V P YG+LSG++++ +G RV V+ +K+NP DFALWKAAK GEPS
Sbjct: 134 YAYTVDGDVMFSVASFPEYGKLSGKKVDELMSGARVDVNEKKKNPLDFALWKAAKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMS YL FDIHGGG DL FPHHENEIAQS AA ++ V+Y
Sbjct: 194 WESPWGPGRPGWHIECSAMSMFYLGQHFDIHGGGADLTFPHHENEIAQSEAATGETFVNY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V EKMSKSLGN IR I + HP ALRHFL+++HYRSPL+YS + +S
Sbjct: 254 WVHNGFVNIRAEKMSKSLGNVLNIRDILKTVHPEALRHFLLTSHYRSPLDYSDAFVKESS 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ +Y + AL E T+ P + + + F M DD NT L
Sbjct: 314 TALERLYAAM----AALDELIEARGTSDDLPQE---LTGIEERFSEAMDDDFNTPRALAI 366
Query: 302 AFQDALKFIN--SSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR-ILGLLPPGAYSEV 358
F+ A + IN S N + K E LR++++ + V R +LG+L +E
Sbjct: 367 LFE-AARTINRISGTNSVPKP----------ELLREVKDRILHVAREVLGILREDQ-TEF 414
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L++ + ++EE + Q I ERA ARK+K+F+++D+IR +L KGI L D K TI
Sbjct: 415 LERARKAGAPELGISEELIQQYIVERAEARKSKNFARADEIRNELASKGIVLEDTPKGTI 474
Query: 419 WR 420
W+
Sbjct: 475 WK 476
>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
Length = 480
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 254/421 (60%), Gaps = 18/421 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G +S R+ +E+ DMA L PT+QP+ ++H+ +I ++ ++I+
Sbjct: 74 KIINRANRDGVPYNEISERFIKEFDSDMARLMLRIPTFQPKATEHVPEIIALVQKLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY DVF+ V++ Y +LS + LE+ +AG R+ VD +K +P DFALWK AK GEP
Sbjct: 134 FAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIEVDDKKEHPMDFALWKGAKPGEPY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIAQS AA V Y
Sbjct: 194 WESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIAQSEAASGKPFVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTI+++ ERY LR FL+SAHYRSP+++S L A
Sbjct: 254 WLHNGFVNINAEKMSKSLGNFFTIKEVLERYDAEVLRFFLLSAHYRSPIDFSDQNLKEAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ IY+ L + L+ +HG T E C + + F M DD NT+ L
Sbjct: 314 LGLERIYKALSGIDERLTAGPDHGATEESAELEEKC-SAIATRFIEAMDDDFNTAMALGH 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEVL 359
F D ++ IN +L +S +E L++++ EV + LG+ P A+ L
Sbjct: 373 IF-DLVRSINRAL-----------PVSPLELLKRVKEEVARIAATLGVCDSVPAAF---L 417
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q++KD+ E+ E++ LI ERA AR++K+F +SD+IR L K I L+D + T W
Sbjct: 418 QRMKDRKTSEMEIPVEEIEALIAERAEARRSKNFKRSDEIRDLLLEKDIVLLDTPQGTTW 477
Query: 420 R 420
+
Sbjct: 478 K 478
>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 481
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/423 (43%), Positives = 253/423 (59%), Gaps = 21/423 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ G LS + Q + DMA L PT QP+ ++H++ I ++ ++I N
Sbjct: 74 KIINRANERGITSQQLSEEFIQAFDEDMARLGLDLPTVQPKATEHIDHIIALVERLIANG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+FAVE +Y +LS + L+ +AG R+A +KRNP DFALWKAAK GEPS
Sbjct: 134 KAYASDGDVYFAVESFDSYLKLSKRNLDEMQAGARIAPGEKKRNPMDFALWKAAKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM YL FDIHGGG DL+FPHHENEIAQS AA V Y
Sbjct: 194 WESPWGKGRPGWHIECSAMGMEYLGESFDIHGGGKDLVFPHHENEIAQSEAATGQPFVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTIR I + Y P +R F++SAHYRSP+++S L A
Sbjct: 254 WLHNGFVNVNQEKMSKSLGNFFTIRDILKTYDPEVVRFFILSAHYRSPIDFSDQNLKEAR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN--KLRDEFHARMSDDLNTSHIL 299
+ Y+ LQ L A P+ + + +L +F M DD NT+ +
Sbjct: 314 LGLSRFYEGLQAAAEVL---------AECPPSDVEATDGAELTAKFREAMDDDFNTAQAI 364
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSE 357
F+ ++N L + +++ L+ S+R + + E+ ++LG+ P A+
Sbjct: 365 GYLFEGI-----RTMNRLMATKKFRKKADLVASVRSLYDTFLELGKVLGMFGSEPKAW-- 417
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
L Q + AL ++T E++ LI ER AR++KDF++SD IR +L KGI L+D T
Sbjct: 418 -LNQQRLSALADLDITVEEIDALIAERLQARQDKDFARSDAIRDELAEKGILLLDGAGGT 476
Query: 418 IWR 420
W+
Sbjct: 477 DWK 479
>gi|323703779|ref|ZP_08115417.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323531248|gb|EGB21149.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 493
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 249/420 (59%), Gaps = 9/420 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G +PL+L+N+Y EY VD L L P+VS+H+++I D+I +
Sbjct: 79 KIINRAKEEGMDPLALANKYINEYFVDADALNVLRADVHPKVSEHIKEIIDLIKLLEQRG 138
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+FAV P YG+LSG+ LE+ +AG RV VD RK++P DFALWKAAK GEPS
Sbjct: 139 HAYAVDGDVYFAVRSFPEYGKLSGRNLEDMQAGARVEVDVRKKDPMDFALWKAAKPGEPS 198
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQS A+C Y
Sbjct: 199 WESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLIFPHHENEIAQSEASCGKPFARY 258
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG +T N EKMSKSLGNFF +R+I +++ P +R FL+S HYRSPL++ +L A
Sbjct: 259 WMHNGFITINQEKMSKSLGNFFLVREILDKFPPDVVRWFLLSTHYRSPLDFDDEKLQVAG 318
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ I ++ AL GK A + + LR EF M DD NT+ ++
Sbjct: 319 RGLERIKTAVRLLYEALDRPDSAGKEALDAARFKGKLAALRSEFEQAMDDDFNTALAIS- 377
Query: 302 AFQDALKFINSSL-NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + K IN + N+ P +QL L VK+ +LG+L S L
Sbjct: 378 VFFELSKEINILVGNLGGVVTPAARQL-----LADAHALVKDFNYVLGILKEDQTSGRL- 431
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L + K +L + V +I+ R AR KD++ +D IR L GI L D + W+
Sbjct: 432 -LLEAPAKDDKLVDALVQLIIKIRQEARGKKDWATADAIRDGLKELGIILEDTPQGVRWK 490
>gi|374621461|ref|ZP_09693993.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
gi|373940594|gb|EHQ51139.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
Length = 460
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 190/422 (45%), Positives = 251/422 (59%), Gaps = 39/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ +L++R+ Q D L P+++PR + H+ I MI ++
Sbjct: 73 KIIRRAAENGESIEALTDRFIQAMHEDADALGVARPSFEPRATAHIHDILHMIGTLLRRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV+++V YG+LSG+R+E+ RAGERVA D KR+P DF LWKAAK GEP
Sbjct: 133 FAYVGDNGDVYYSVSLFDGYGKLSGKRIEDLRAGERVAPDESKRDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAMS HYL FDIHGGG DL FPHHENEIAQS AA + V+
Sbjct: 193 AWDSPWGPGRPGWHIECSAMSTHYLGHHFDIHGGGQDLQFPHHENEIAQSEAASCEHYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N EKMSKSLGNFFT+RQ+ Y P +R+F++ +HYRSPLNYS L++A
Sbjct: 253 YWMHNGFVRVNEEKMSKSLGNFFTVRQVLAHYRPEEVRYFILGSHYRSPLNYSDEPLNNA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ ++P G+ A R F A M DD NT L+
Sbjct: 313 RAALNRLYTALR----GVAPLPSEGEGA-----------PFRSRFDAAMQDDFNTPVALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F I +N L+ QP E+ ++ ++E+ +LG+L P AY
Sbjct: 358 VLFD-----IAHEVNRLRDSQP--------EAAGRLAGLLREMGGVLGILGSDPDAY--- 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ + AE+ LIE R AR+ KDF+++D+IR L +G+ L D T
Sbjct: 402 LQGGAGEGPDEAEIQ-----TLIEARLEARRRKDFAEADRIRDVLKEQGVVLEDGPGGTT 456
Query: 419 WR 420
WR
Sbjct: 457 WR 458
>gi|134298071|ref|YP_001111567.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|187629810|sp|A4J0Y9.1|SYC_DESRM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134050771|gb|ABO48742.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 486
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 251/419 (59%), Gaps = 7/419 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + +PL L+ +Y QE+ VD L + P+VS+H+E+I D+I ++ +
Sbjct: 72 KIINRAAEEKIDPLELAQKYIQEFFVDADALNVMRADTHPKVSEHIEEIIDLIKRLEDQG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+FAV YG+LSG+ LE+ +AG RV VD RK++P DFALWKAAK GEPS
Sbjct: 132 HAYVVDGDVYFAVRSFAEYGKLSGRSLEDMQAGARVEVDPRKKDPMDFALWKAAKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL + FDIHGGG DLIFPHHENEIAQS AAC+ Y
Sbjct: 192 WDSPWGSGRPGWHIECSAMAEKYLGNGFDIHGGGFDLIFPHHENEIAQSEAACKAPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG +T N EKMSKSLGNFF +R+I ++ P +R +L+S HYRSPL++ +L +
Sbjct: 252 WMHNGFITINQEKMSKSLGNFFLVREILAKFPPDVVRWYLLSTHYRSPLDFDDEKLVMSG 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ I L+ A+ G+ + E+ + ++R EF M DD NT+ +
Sbjct: 312 KGLERIKTALRLLYEAMDLPVYEGEDIQGAENFEETLQRIRLEFEKAMDDDFNTA-LAIS 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D K +N + L K L + + L + +K+ R+LG+L + L
Sbjct: 371 YFFDLAKEVNIYVGKLNSK----VTLEMRKILDQAHTLIKDFNRVLGILKEDKMTGKL-- 424
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L + A LTE V +I+ R AR KD+S +D IR L G+ L D + W+
Sbjct: 425 LIEMAGADDTLTEGLVQLIIKIRQEARSKKDWSTADAIRDGLKELGVVLEDTPQGVRWK 483
>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
Length = 495
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 187/430 (43%), Positives = 253/430 (58%), Gaps = 20/430 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ RY Q D A LQ LPP +PR ++ ME I M+ Q++
Sbjct: 73 KIIHRANEKGESIHALTARYIQALHEDEASLQILPPDREPRATESMEAILAMVRQLLEQG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY E GD+++ V YG LSG+ LE+ RAGERV V+ K +P DF LWKAAK EP
Sbjct: 133 YAYQGENGDIYYDVSHFEGYGALSGKHLEDLRAGERVQVNEAKTDPLDFVLWKAAKPDEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA V+
Sbjct: 193 AWESPWGPGRPGWHIECSAMSIQELGVHFDIHGGGQDLQFPHHENEIAQSEAATGSKFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V ++EKMSKSLGNFFT+R++ E YHP LR+F++S+HYRSPLNYS QLD+A
Sbjct: 253 YWMHNGFVRLDDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSPLNYSKQQLDTA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G + + I + R+ M DD NT L
Sbjct: 313 KAAMTRLYTALRGIPRGDDRASAQGLSWEFVDGEDPFILRFREA----MDDDFNTPEALA 368
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK-------IENEVKEVL---RILGLL 350
L + +LN +K ++ SL LR + +E ++ L R + ++
Sbjct: 369 -----LLNEVRHALNRARKGGDTEKGQSLAVLLRALGGILGLLAHEPEQFLRDPRQMVVV 423
Query: 351 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
A + L + ++ L+ + + QL+ +R ARKNKD++++D+IR L +GI L
Sbjct: 424 SDTAKTTSLSLTSQTSTEKVVLSHDGIEQLVAQRTVARKNKDWAEADRIRGILKDQGITL 483
Query: 411 MDMGKETIWR 420
D T+WR
Sbjct: 484 EDTAAGTLWR 493
>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|171460796|sp|A0LIR9.1|SYC_SYNFM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 493
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 184/426 (43%), Positives = 255/426 (59%), Gaps = 15/426 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAND G + S++ RY + DM L L P +P ++++ + ++I +++
Sbjct: 74 KIIRRANDAGTDCRSIAQRYIAAFYEDMDALGVLRPDLEPLATENVPGMIEIIRVLMDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY DVFF +EK P YG+LSG+++E+ AG RV VD+RKRNP DF LWK +K GEPS
Sbjct: 134 IAYQAGADVFFEIEKFPGYGKLSGRQIEDMLAGARVEVDARKRNPLDFVLWKGSKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAM + +L FDIHGGG DLIFPHHENEIAQS AA V Y
Sbjct: 194 WDSPWGPGRPGWHIECSAMGSRFLGKTFDIHGGGKDLIFPHHENEIAQSEAAFGMPFVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V NNEKMSKSLGNF TIR + ++ HP +R F++S HYRSP+++S + A
Sbjct: 254 WLHNGFVNINNEKMSKSLGNFLTIRDVLQKVHPETVRFFVLSKHYRSPVDFSDETIGEAE 313
Query: 242 DAVFYIYQTLQDCEVALS-----PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
+ +Y TL + + FQE + +P D I L F M +D NT+
Sbjct: 314 KGLERLYGTLGAVKERAAAGVEEAFQEKALRGQ-DPELFDQIAALSGAFREAMDNDFNTA 372
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGA 354
L F + + L+ +KQ K +L R + +++ +LGLL P A
Sbjct: 373 QALGNLFS-LQRHLQRFLDKFGRKQLKGPASALA---RAGADAIRDHALVLGLLTREPEA 428
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ + LK +K LTE +V + IE R AR++K+F+++D++R ++ +KGI L D
Sbjct: 429 FQAEQRSLK---IKSTGLTEAEVERCIELRRQARQDKNFAEADRLREEIEKKGIQLEDSP 485
Query: 415 KETIWR 420
T WR
Sbjct: 486 AGTRWR 491
>gi|333922423|ref|YP_004496003.1| cysteinyl-tRNA synthetase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333747984|gb|AEF93091.1| cysteinyl-tRNA synthetase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 486
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 249/420 (59%), Gaps = 9/420 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G +PL+L+N+Y EY VD L L P+VS+H+++I D+I +
Sbjct: 72 KIINRAKEEGMDPLALANKYINEYFVDADALNVLRADVHPKVSEHIKEIIDLIKLLEQRG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+FAV P YG+LSG+ LE+ +AG RV VD RK++P DFALWKAAK GEPS
Sbjct: 132 HAYAVDGDVYFAVRSFPEYGKLSGRDLEDMQAGARVEVDVRKKDPMDFALWKAAKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQS A+C Y
Sbjct: 192 WESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLIFPHHENEIAQSEASCGKPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG +T N EKMSKSLGNFF +R+I +++ P +R FL+S HYRSPL++ +L A
Sbjct: 252 WMHNGFITINQEKMSKSLGNFFLVREILDKFPPDVVRWFLLSTHYRSPLDFDDEKLQVAG 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ I ++ AL GK A + + LR EF M DD NT+ ++
Sbjct: 312 RGLERIKTAVRLLYEALDRPDSAGKEALDAARFKGKLAALRSEFEQAMDDDFNTALAIS- 370
Query: 302 AFQDALKFINSSL-NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + K IN + N+ P +QL L VK+ +LG+L S L
Sbjct: 371 VFFELSKEINILVGNLGGVVTPAARQL-----LADAHALVKDFNYVLGILKEDQTSGRL- 424
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L + K +L + V +I+ R AR KD++ +D IR L GI L D + W+
Sbjct: 425 -LLEAPAKDDKLVDALVQLIIKIRQEARGKKDWATADAIRDGLKELGIILEDTPQGVRWK 483
>gi|389720629|ref|ZP_10187458.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
gi|388609525|gb|EIM38688.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
Length = 473
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/422 (42%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL++R+ D A L CL P P+ +D+++Q+++MI ++NN
Sbjct: 75 KIIKRANENGESISSLTSRFIDAMNEDFAKLGCLAPDAAPKATDYIDQMQNMIDTLVNNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 TAYPANNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS AA +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLSFPHHENEIAQSEAATGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+NYS + L
Sbjct: 255 VNYWMHAGFINVDGEKMSKSLGNFFTIRDVIEKFHPEVVRYFIVSSHYRSPVNYSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A + + Y + + + E + F+A M DD NT
Sbjct: 315 EAKNTLMRFYHSFKAYQAVYGE-----------QMVETLDQSFVERFNAAMCDDFNTPEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K Q ++Q +LR + N ILGL+ +
Sbjct: 364 IAVLFE-----LNKELNRAVKDQNQEQAAVYYSTLRHLTN-------ILGLVQHNVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL +E ED LI++R A+K K+F+++D+IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALGLSEAQIED---LIQQRKDAKKEKNFARADEIRQSLLDQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|222053657|ref|YP_002536019.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
gi|254781681|sp|B9LZV4.1|SYC_GEOSF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|221562946|gb|ACM18918.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
Length = 494
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 187/427 (43%), Positives = 256/427 (59%), Gaps = 18/427 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G +S R+ +E+ DM L PT QP+ ++H+++I ++ +I+ D
Sbjct: 74 KIINRANREGVTYDLISERFIKEFDRDMERLGLKLPTCQPKATEHIDEIISLVQTLIDKD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV F VEK +Y +LSG+ LE+ +AG R+ VD RKR+P DFALWK AK GEP
Sbjct: 134 FAYQAGGDVNFCVEKFDSYLKLSGRTLEDMQAGARIEVDERKRHPMDFALWKEAKPGEPF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS YL + FDIHGGG DLIFPHHENEIAQS AA V+Y
Sbjct: 194 WESPWGKGRPGWHIECSAMSMKYLGTTFDIHGGGKDLIFPHHENEIAQSEAATGKPFVNY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N+EKMSKSLGNFFTI+++ +RY LR FL+SAHYRSP+++S L A
Sbjct: 254 WLHNGFVNINSEKMSKSLGNFFTIKEVLDRYDNEVLRFFLLSAHYRSPIDFSDQNLTEAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKT------ARINPAAEDCINK---LRDEFHARMSDD 292
+ IY+ L E L+ +G T + +N A + +K + F M DD
Sbjct: 314 AGLERIYKALAAVEETLAA--GNGCTGAPVDASSLNEAEGELFDKTTSISARFGEAMDDD 371
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT+ + F D ++ +N L+ L + I+ EV ++ +LG+
Sbjct: 372 FNTALAMAHVF-DLVRCVNRVLSETAGASDNICSLCTL-----IKAEVAKIAGVLGIFSS 425
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
S L++LK + ++ +++ +LI ER AARK KDF +SD+IR L K I L+D
Sbjct: 426 KPAS-FLERLKSRKAGNLDIAVDEIERLIAERTAARKAKDFKRSDEIRDQLAAKNIVLLD 484
Query: 413 MGKETIW 419
+ T W
Sbjct: 485 SQQGTTW 491
>gi|147676630|ref|YP_001210845.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
gi|187629838|sp|A5D5M0.1|SYC_PELTS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146272727|dbj|BAF58476.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
Length = 484
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/419 (44%), Positives = 248/419 (59%), Gaps = 9/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G++PL+L+ RY EY D L P VS+H+ I M+ +++
Sbjct: 72 KIINRAQEEGDDPLALARRYIGEYFKDADALNVRRADRHPLVSEHIPDIIKMVDELVKKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+G+V+F V K YG+LSG+ LE+ +AG RV VD RKR+P DFALWKAAK GEP
Sbjct: 132 AAYVVDGNVYFEVRKFAGYGKLSGRTLEDMQAGARVEVDPRKRDPLDFALWKAAKPGEPC 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMS YL + FDIHGGG DLIFPHHENEIAQS AA V Y
Sbjct: 192 WDSPWGPGRPGWHIECSAMSLKYLGTNFDIHGGGYDLIFPHHENEIAQSEAATGQPFVRY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG +T N EKMSKSLGNFF +R I ++ P +R FL+S HYRSPL++ ++ +A
Sbjct: 252 WMHNGFITVNEEKMSKSLGNFFLVRDILAKFPPELVRFFLLSTHYRSPLDFDGEKMAAAG 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ I +L+ AL G A + D +++R F A M DD NT+ + G
Sbjct: 312 RGLERIKTSLRLLYEALERPVSEGVQA---VCSRDPFDEIRASFEAAMDDDFNTA-LAIG 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A D + N+++ Q + L +L + NE EVL I + GA +L
Sbjct: 368 AVFDLAREANTAVQRTGPAVSGQDRQILQYAL-DLFNEFNEVLGIFKV--DGASGRLL-- 422
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ A + L E + ++E R ARK KD+S +D+IR L GI L D + W+
Sbjct: 423 IDGAAGDDSGLVEGLINLILEVRQEARKRKDWSTADRIRDGLKELGILLEDTPQGVRWK 481
>gi|404494911|ref|YP_006719017.1| cysteinyl-tRNA ligase [Geobacter metallireducens GS-15]
gi|418067565|ref|ZP_12704904.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
gi|109894903|sp|Q39ZL8.1|SYC_GEOMG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78192539|gb|ABB30306.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|373558563|gb|EHP84899.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
Length = 485
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/421 (42%), Positives = 253/421 (60%), Gaps = 13/421 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G ++S R+ E+ DMA L PT+QP+ ++H+ ++ D+I+++I
Sbjct: 74 KIINRANQEGVPYNAISERFIAEFDRDMAALGLDLPTHQPKATEHIAEMIDVISRLIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F VEK Y +LS + L+ +AG R+ V +KR+P DFALWK +K GEP
Sbjct: 134 FAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVGEKKRHPMDFALWKGSKPGEPF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQS AA Y
Sbjct: 194 WESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQSEAANGKPFAHY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N+EKMSKSLGNFFTI+++ E+Y LR FL+SAHYRSP+++S L A
Sbjct: 254 WIHNGFVNINSEKMSKSLGNFFTIKEVLEKYDAEVLRFFLLSAHYRSPIDFSDQNLREAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ IY TL + L+ E AE + + F M DD NT+ L
Sbjct: 314 AGLERIYGTLAGIDENLTKGAEGTAEETDRELAEKAVT-FPERFREAMDDDFNTAQALGF 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEVL 359
F + S+ +L + + +L+ R + +++V +LG+ P A++E
Sbjct: 373 VFD----LVRSANRVLGEGKGGGSNRALLAEAR---DRIRKVGAVLGIFTSEPRAFAE-- 423
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+LK++ +T E++ +LI ER AAR N+DF ++D+IR L KGI L+D + T W
Sbjct: 424 -RLKNRKAAELPITAEEIERLIAERIAARANRDFKRADEIRDSLAAKGIMLLDSPQGTTW 482
Query: 420 R 420
+
Sbjct: 483 K 483
>gi|148266184|ref|YP_001232890.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|189082065|sp|A5G949.1|SYC_GEOUR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146399684|gb|ABQ28317.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 494
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 184/425 (43%), Positives = 257/425 (60%), Gaps = 14/425 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G ++S R+ +E+ DMA L L PT QP+ ++H+ +I ++ +I+
Sbjct: 74 KIINRANREGVAYDAISERFIKEFDRDMAQLGLLLPTSQPKATEHIPEIITLVQTLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY + GDV F VEK Y +LS + LE+ +AG R+ VD RKR+P DF LWK AK GEP
Sbjct: 134 FAYQMGGDVNFCVEKFDPYLKLSKRNLEDMQAGARIEVDERKRHPMDFVLWKEAKPGEPF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQS AA V Y
Sbjct: 194 WESPWGKGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQSEAASGKPFVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N+EKMSKSLGNFFTI+++ ++Y LR FL+SAHYRSPL++S L A
Sbjct: 254 WLHNGFVNINSEKMSKSLGNFFTIKEVLDKYDSEVLRFFLLSAHYRSPLDFSDQNLTEAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHG----KTARINPAAEDCINK---LRDEFHARMSDDLN 294
+ IY+ L + L+ G + + A + +K L F M DD N
Sbjct: 314 TGMERIYKALVAIDETLASNPATGGEEIDASSLGEAERELFDKSGSLPLRFREAMDDDFN 373
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T+ + G D ++ +N L+ + K++ +L +++ + ++ +LG+
Sbjct: 374 TA-LAMGHIFDLVRCVNRVLS-----EAKERSNTLSALCAQVKANIGKIADVLGIFTSEP 427
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
S +L +LKD+ +++ E++ +LI ERAAARK KDF +SD+IR L K I L+D
Sbjct: 428 AS-LLTRLKDRKASELDISVEEIERLITERAAARKAKDFKRSDEIRDFLLGKNIVLLDSA 486
Query: 415 KETIW 419
+ T W
Sbjct: 487 QGTSW 491
>gi|357039770|ref|ZP_09101562.1| cysteinyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357576|gb|EHG05349.1| cysteinyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
Length = 485
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 176/419 (42%), Positives = 251/419 (59%), Gaps = 8/419 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G++ +L+ RY EY D L L P+VS H+ +I ++ ++
Sbjct: 72 KIINRAREEGDDHQALAERYINEYFKDADALNVLRADIYPKVSGHITEIIKLVETLVEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY+V+GDV++ V K YG+LSG+ LE+ +AG RV +D+RK +P DFALWK+AK GEP+
Sbjct: 132 FAYLVDGDVYYNVRKFAGYGKLSGRTLEDMQAGARVEIDTRKNDPMDFALWKSAKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQS AA Y
Sbjct: 192 WDSPWGKGRPGWHIECSAMALKYLGVNFDIHGGGFDLIFPHHENEIAQSEAATGQPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG +T N EKMSKSLGNFF +R I + P +R +L+ HYRSPL++ +L +A
Sbjct: 252 WMHNGFITVNQEKMSKSLGNFFLVRDILSEFSPEVVRFYLLGTHYRSPLDFDDEKLTAAQ 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ I +L+ + AL+ ++ G R +PA + ++R EF M DD NT+ + TG
Sbjct: 312 KGLERIKTSLRLLDEALAG-RQAGSAERPDPALAVRLEEIRIEFEKAMDDDFNTA-LATG 369
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
+ + +NS L P ++ I +L+K + +LG+ A E L
Sbjct: 370 MLFNLAREVNSYLQRSDFPSPAEK----IAALQKARQVFLQFNSVLGVFKTSARGEFL-- 423
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+D+ ++ ++ E+ + +IE R AR+NKD+ +D++R L GI L D W+
Sbjct: 424 LEDEGSEKEKVVEDLIDLIIEIRQTARQNKDWPTADRMRDRLKELGIVLEDTPGGVRWK 482
>gi|445414926|ref|ZP_21434004.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
gi|444764053|gb|ELW88381.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
Length = 473
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 180/422 (42%), Positives = 252/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L++R+ Q D +L CL P PR +D+++Q+++MI ++N
Sbjct: 75 KIIARANENGESITALTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQNMIGHLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F VEK YGRLSG++L++ +AG ERV VD K++P DF LWK AK
Sbjct: 135 AAYPSANGDVYFEVEKFAKYGRLSGRKLDDMQAGASERVDVDVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQSEASTDEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDFALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A + Y A +Q+ + E + + F+ M DD NTS
Sbjct: 315 EAKTTLSRFYH-------AFKAYQQVYADLSTDVLDETFVER----FNIAMRDDFNTSEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ I LN K++ +Q +LR + N ILGL+ +
Sbjct: 364 IAVLFE-----IIKELNRAVKEENAEQATLYYSTLRHLTN-------ILGLVQYNVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L+E D+ I++R A+KNKDF+++D+IR L +G+ L D + TI
Sbjct: 412 KSDIGQEALG---LSEADITDFIQQRVDAKKNKDFARADEIRQSLLAQGVVLEDTRQGTI 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|294101993|ref|YP_003553851.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
gi|293616973|gb|ADE57127.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
Length = 472
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/419 (41%), Positives = 252/419 (60%), Gaps = 24/419 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN+ G L++ + +EY D L PR +DHM++I +++ +I+
Sbjct: 74 KMINRANEEGITVKELADAFIKEYFEDADALGVRRADIYPRATDHMKEIVEVVQTLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDVFF+VE P YG+LS Q +E+ ++G R+ V+ +KR+P DFALWKA K GEP+
Sbjct: 134 HAYVVDGDVFFSVESFPGYGKLSKQSIEDLQSGSRIDVNEQKRHPLDFALWKAQKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS YL + FDIH GG DLIFPHHENE+AQ+ AA V +
Sbjct: 194 WESPWGLGRPGWHIECSVMSTKYLGNTFDIHSGGSDLIFPHHENEVAQAEAATGMQFVRF 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ + EKMSKSLGNF T+R ++Y PLA+R+F++SAHYRSP+N+S L+ A+
Sbjct: 254 WLHNGYLLIDKEKMSKSLGNFLTVRNARKKYSPLAIRYFMLSAHYRSPINFSEEGLNQAT 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
AV + D E AL ++ K +E I + +F+ M+DD NT+ L
Sbjct: 314 GAVERLRNCWTDLEYALQSREQKEKDDTEAFLSE--IKQAETKFYEEMNDDFNTAGALGS 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ ++ IN+ L K + ++ + ++ ++ I+GL
Sbjct: 372 VFE-VVRLINTYL-----KDNSSIDFKVCKAAQTFFTKIDGIMGIMGLES---------- 415
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
++ EL ++ +IEER AARK +DF+KSD IR L KGI L D + T W+
Sbjct: 416 ------EKEELDTSEIESMIEERTAARKARDFAKSDAIRDQLAEKGIILEDTPEGTKWK 468
>gi|220934112|ref|YP_002513011.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254781696|sp|B8GNT5.1|SYC_THISH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219995422|gb|ACL72024.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 460
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/420 (43%), Positives = 240/420 (57%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ +L++R+ D L LPP+ +PR ++H++ + MI ++
Sbjct: 73 KIIRRAAENGEDIRALTDRFIAAMHEDAEALGVLPPSAEPRATEHIDGMLAMIGTLVERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++AV K YGRLSG+RLE+ RAGERVA D KR+P DF LWKAAK GEP
Sbjct: 133 YAYAGDNGDVYYAVAKFEPYGRLSGKRLEDLRAGERVAPDEAKRDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAMS HYL + FDIHGGG DL FPHHENEIAQS AA + V+
Sbjct: 193 AWDSPWGPGRPGWHIECSAMSTHYLGNHFDIHGGGQDLQFPHHENEIAQSEAATCEHFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N EKMSKSLGNFFT+R++ RY +R+F++S+HYRSPLNYS LD+A
Sbjct: 253 YWMHNGFVRVNEEKMSKSLGNFFTVREVLARYPAEVVRYFILSSHYRSPLNYSDEPLDAA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y L+ + ++PA + R F A M DD NT +
Sbjct: 313 RAGLTRLYTALRGVQA-------------VDPAGQG--EGYRRRFQAAMDDDFNTPVAMA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F I LN L+ + P L G
Sbjct: 358 VLFD-----IARELNRLRDEDPAGAAPLAGLLRELGGMLGLLAGDPEAFLKGG------- 405
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ +L E + LI +R AARK KDF+++D+IR +L +G+ L D T WR
Sbjct: 406 -------EAGDLDEAAIEALIAQRLAARKAKDFAEADRIRDELAGQGVVLEDGPGGTTWR 458
>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
Length = 484
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/430 (43%), Positives = 251/430 (58%), Gaps = 31/430 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA++ GEN L+ RY + D LQ LPP +PR ++ ME I M+ +++
Sbjct: 73 KIIRRAHERGENIQELTARYIEALHEDAEGLQILPPDREPRATESMEAIIAMVQRLLEQG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY E GD+++ V YG LSG++L+ RAGERV V K +P DF LWKAAK EP
Sbjct: 133 YAYQGENGDIYYDVSHFEGYGALSGKQLDELRAGERVQVSEAKTDPLDFVLWKAAKPNEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA V+
Sbjct: 193 AWDSPWGPGRPGWHIECSAMSTQALGPHFDIHGGGQDLQFPHHENEIAQSEAATGCKFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V ++EKMSKSLGNFFT+R++ E YHP LR+F++S+HYRSPLNY+ QL++A
Sbjct: 253 YWMHNGFVRVDDEKMSKSLGNFFTVREVLEHYHPEVLRYFILSSHYRSPLNYTEQQLETA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
AV +Y L+ G + + + + F M DD NT L
Sbjct: 313 QAAVTRLYTALRGMPGEGISISAQGSAQELAEGDDPFVQR----FCEAMDDDFNTPEALA 368
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
L I +LN +++ K + ++ L ++ + + ILGLL E Q
Sbjct: 369 -----LLNEIRHALNRAREEGDKDK----VQYLARL---LPSLGAILGLLT----QEPEQ 412
Query: 361 QLKD----------KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
L+D A A L++ D+ QLI +R AARKNKD++ +D +R L ++GI L
Sbjct: 413 FLRDPRQAAAPSIVSAEGEAALSDGDIEQLIAQRTAARKNKDWAAADHLRDVLKKQGITL 472
Query: 411 MDMGKETIWR 420
D T+WR
Sbjct: 473 EDTPTGTLWR 482
>gi|451947839|ref|YP_007468434.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
gi|451907187|gb|AGF78781.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
Length = 489
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 175/420 (41%), Positives = 252/420 (60%), Gaps = 11/420 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G L+NR+ E+ VDM L PT +P+ ++H++++ D+++++I+
Sbjct: 74 KIIARAEEQGTTTEELANRFIDEFYVDMDRLGVDRPTMEPKATEHIQEMIDLVSELIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV++ V YG+LSG+ L++ +AG RV+V+ K +P DF +WKA+K GEPS
Sbjct: 134 MAYPAGGDVYYKVHSFDGYGKLSGRNLDDMQAGARVSVNENKTDPMDFVMWKASKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMS YL S FDIHGGG DLIFPHHENE+AQS A V+
Sbjct: 194 WDSPWGPGRPGWHIECSAMSRKYLGSTFDIHGGGQDLIFPHHENELAQSEGANNKPFVNM 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+G VT +EKMSKSLGNF TIR I YHP LR F+ S YR+PL++S + A
Sbjct: 254 WIHHGFVTIRDEKMSKSLGNFLTIRDILAHYHPEVLRFFIFSTQYRNPLDFSEAAMQDAM 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC--INKLRDEFHARMSDDLNTSHIL 299
+ +Y+ + C+ AL H +A I +D I L + F M +D NT+
Sbjct: 314 TGLDRLYECIAACD-ALG--TAHSDSAEIVATPKDIKKIESLEERFQKAMDNDFNTAQAQ 370
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ +K IN + L P S L+ ++ ++ I+G++ A +E L
Sbjct: 371 ASLFE-TVKVINKIIQQL----PDVPATSDYNLLKSGSADIVKLAAIMGIVQENA-AEYL 424
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
K L +++E ++L LI ER AR +K++++SD+IR +L +GI L D + T W
Sbjct: 425 AHKKAAMLAETDISEAEILALIAERNQARTDKNWTRSDEIRDELLDRGIELKDGPEGTGW 484
>gi|39998454|ref|NP_954405.1| cysteinyl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|61216254|sp|Q747A2.1|SYC_GEOSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|39985401|gb|AAR36755.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
Length = 481
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 248/421 (58%), Gaps = 17/421 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G +S R+ E+ DMA L PTYQP+ ++H+ ++ +I +++
Sbjct: 74 KIINRANKEGVPFNVISERFIAEFDRDMAALGLDLPTYQPKATEHIAEMIQVIERLVAKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+VE Y +LS + LE +AG R+ V +KR+P DFALWK +K GEP
Sbjct: 134 FAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEKKRHPMDFALWKGSKPGEPY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQS AA Y
Sbjct: 194 WDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQSEAANGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTI+++ E Y LR FL+SAHYRSP+++S L A+
Sbjct: 254 WIHNGFVNINAEKMSKSLGNFFTIKEVLESYDAEVLRFFLLSAHYRSPIDFSDQNLKEAA 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ IY L + A++ + RI+ + L F M DD NT+ L
Sbjct: 314 AGLERIYNALAGIDEAVAA--DGTGAGRIDEELAEKAAGLPTRFREAMDDDFNTAQALGY 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEVL 359
F D ++ +N L + +++ S R+ + V +LGL PGA+ E L
Sbjct: 372 VF-DLVRAVNRVL------AEGEIDRAVLASARE---AIDRVGAVLGLFTSEPGAFVERL 421
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ K AL + ++ +LIEER AARK +DF ++D+IR L +GI L+D + T W
Sbjct: 422 KSRKAAALP---IEAAEIERLIEERNAARKARDFRRADEIRDTLAAQGILLLDSAQGTTW 478
Query: 420 R 420
+
Sbjct: 479 K 479
>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 481
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/419 (42%), Positives = 248/419 (59%), Gaps = 19/419 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+N+ + L+ ++ +E+ DM L +PP + P+ ++ ++++ + ++I
Sbjct: 73 KIIKRSNEENIHWKELTEKFIKEHDYDMEKLNIMPPDFTPKATEFIDEMIKLCEKLIEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV++ VEK +YG+LS + L+ AG RV VD RK NP DFALWK +K EP
Sbjct: 133 YAYVVDGDVYYRVEKFKDYGKLSKRNLDELLAGARVEVDERKENPLDFALWKKSKENEPY 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MSA L FDIHGGG DLIFPHHENEIAQS AA + Y
Sbjct: 193 WESPWGKGRPGWHIECSVMSAKLLGIPFDIHGGGKDLIFPHHENEIAQSEAAEEKMFAKY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTIR+I + + P LR FL++ HYRSP+++S L A
Sbjct: 253 WIHNGFVNINKEKMSKSLGNFFTIREIIKEFDPEVLRFFLLTTHYRSPIDFSFDHLVEAE 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++ IY L D E + + N E+ + EF M DD N++ L
Sbjct: 313 QSLNRIYTFLDDLEHYVVSKKGKNYLEEANKIFEN----FKKEFETSMDDDFNSAKALAA 368
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K IN LN K+ ++ L L + +KI V +VL I+ P ++ L
Sbjct: 369 IF-DYIKEINRLLNQKVVKETYEEILKLTNNFKKI---VNQVLGIINKTPKEWFASNLP- 423
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
++E ++++ IEER ARKNK+F +D+IR +L GI L+D T +R
Sbjct: 424 ----------ISESELIKKIEERTNARKNKNFELADKIRDELESLGIELLDTPTGTRYR 472
>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 473
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 260/423 (61%), Gaps = 31/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE +L++R+ Q D L CL P PR +++++Q+++MI ++++N
Sbjct: 75 KIIKRANENGETIQALTDRFIQAMNEDAHRLGCLAPDEAPRATEYIDQMQNMIGKLVDNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F VE+ YGRLSG++L++ +AG +RV V+ K++P DF LWK AK
Sbjct: 135 SAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP W+SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS AA +
Sbjct: 195 EPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQSEAATGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE-FHARMSDDLNTSH 297
A A+ Y A +Q+ + N D +++ E F+A M DD NT+
Sbjct: 315 EAKTALTRFYH-------AFKAYQQ-----QFNEELTDHFSQIHLERFNAAMCDDFNTAE 362
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A LN K++ +Q +LR + N ILGL+
Sbjct: 363 AMAVLFELA-----KELNRALKEENAEQAKVFYSTLRHLTN-------ILGLVQHNVDDF 410
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ + +AL L+E ++ +LI++R A+K KDF+K+D IR +L +G+ L D + T
Sbjct: 411 LRSDIGQEALG---LSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQGVVLEDTRQGT 467
Query: 418 IWR 420
+WR
Sbjct: 468 LWR 470
>gi|334338878|ref|YP_004543858.1| cysteinyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334090232|gb|AEG58572.1| cysteinyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 486
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/422 (44%), Positives = 251/422 (59%), Gaps = 7/422 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA +PL+L+ +Y E+ VD L L P+VS+H+++I ++I +
Sbjct: 72 KIINRAKKENLDPLALAKKYINEFFVDGDALNVLRADRYPKVSEHIKEIINLIKLLQERG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY VEGDV+F+V P YG+LSG+ LE+ +AG RV VD RK++P DFALWKAAK EPS
Sbjct: 132 HAYEVEGDVYFSVRSFPGYGKLSGRSLEDMQAGARVEVDPRKKDPMDFALWKAAKPEEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ YL S FDIHGGG DLIFPHHENEIAQS AAC+ Y
Sbjct: 192 WQSPWGNGRPGWHIECSAMAGKYLGSGFDIHGGGFDLIFPHHENEIAQSEAACKQPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG +T N EKMSKSLGNFF +R+I +++ P +R FL+S HYRSPL++ +L A
Sbjct: 252 WMHNGFITVNQEKMSKSLGNFFLVREILDKFPPDVIRWFLLSTHYRSPLDFDDEKLAVAG 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ I L+ A+ + A + + + LR EF M DD NT+ ++
Sbjct: 312 RGLERIKTALRLLYEAMERPASGEEEAGAGSSFHEKLTLLRLEFEKAMDDDFNTALAISV 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A K IN +N + K + L ++ + + VKE R+LG+L S L
Sbjct: 372 FFELA-KEINILVNGMGDKISPEAVL----AMEQAHDLVKEFNRVLGVLKEDPVSGKL-- 424
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
+ + + + LTE V +I+ R AR KD+S +D IR L GI L D + W+
Sbjct: 425 VLETSGEDDGLTEGLVQLIIKIRQEARSKKDWSTADTIRDGLKELGIILEDTPQGVRWKK 484
Query: 422 CV 423
V
Sbjct: 485 QV 486
>gi|78485268|ref|YP_391193.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|109894958|sp|Q31H54.1|SYC_THICR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78363554|gb|ABB41519.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 456
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/420 (44%), Positives = 255/420 (60%), Gaps = 40/420 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ SL++R+ D L L P +P+ +++M++I+ MI+ +I D
Sbjct: 74 KIIQRALENKESIQSLTSRFIDAMHEDEKALNVLRPDMEPKATEYMDEIETMISTLIEKD 133
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY E GDV+F V+ +YGRLSG+ +E +G RV ++S K++P DF LWKA+K EP
Sbjct: 134 FAYPAENGDVYFHVKADDDYGRLSGKNIEELDSGSRVEINSVKKDPLDFVLWKASKENEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 194 AWQSPWGDGRPGWHIECSAMSTKCLGNHFDIHGGGLDLSFPHHENEIAQSECATGEHYVN 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V ++EKMSKSLGNFFTIR++ ++YHP +R+FL+++HYRSP+NYS LD A
Sbjct: 254 SWMHCGFVRIDDEKMSKSLGNFFTIREVLKQYHPEVIRYFLLASHYRSPVNYSEENLDVA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+V +Y L+ L P + AE +KL EF A M+DD NT +
Sbjct: 314 KASVGRLYSALE-----LVPADQ----------AEPAESKLEAEFMAAMNDDFNTPQAMA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ L K+ KQ+ L L+K+ N++ GLL A S
Sbjct: 359 VLFE------------LAKEVNKQKSPGLAALLKKLANQI-------GLLEQTAESFFKS 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q D ++LT+E + LI ERA ARK KDFS+SD+IR +L +GI L+D + T WR
Sbjct: 400 QPSD-----SDLTDEMIEALIVERAEARKAKDFSRSDEIRDELLAQGIELLDSAEGTSWR 454
>gi|409913806|ref|YP_006892271.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|307635173|gb|ADI86121.2| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 481
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 248/421 (58%), Gaps = 17/421 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G +S R+ E+ DMA L PTYQP+ ++H+ ++ +I +++
Sbjct: 74 KIINRANKEGVPFNVISERFIAEFDRDMAALGLDLPTYQPKATEHIAEMIQVIERLVAKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+VE Y +LS + LE +AG R+ V +KR+P DFALWK +K GEP
Sbjct: 134 FAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEKKRHPMDFALWKGSKPGEPY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQS AA Y
Sbjct: 194 WDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQSEAANGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTI+++ E Y LR FL+SAHYRSP+++S L A+
Sbjct: 254 WIHNGFVNINAEKMSKSLGNFFTIKEVLESYDAEVLRFFLLSAHYRSPIDFSDQNLKEAA 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ IY L + A++ + RI+ + L F M DD NT+ L
Sbjct: 314 AGLERIYNALAGIDEAVAA--DGTGAGRIDEELAEKAAGLPTRFREAMDDDFNTAQALGY 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEVL 359
F D ++ +N L + +++ S R+ + V +LGL PGA+ E L
Sbjct: 372 VF-DLVRAVNRVL------AEGEIDRAVLASARE---AIDRVGAVLGLFTSEPGAFVERL 421
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ K AL + ++ +LIEER AARK +DF ++D+IR L +GI L+D + T W
Sbjct: 422 KSRKAAALP---IEAAEIERLIEERNAARKAQDFRRADEIRDTLAAQGILLLDSAQGTTW 478
Query: 420 R 420
+
Sbjct: 479 K 479
>gi|421465010|ref|ZP_15913698.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
gi|400204272|gb|EJO35256.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
Length = 473
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 260/423 (61%), Gaps = 31/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE +L++R+ Q D L CL P PR +++++Q+++MI ++++N
Sbjct: 75 KIIKRANENGETIQALTDRFIQAMNEDAHRLGCLEPDEAPRATEYIDQMQNMIGKLVDNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F VE+ YGRLSG++L++ +AG +RV V+ K++P DF LWK AK
Sbjct: 135 SAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP W+SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS AA +
Sbjct: 195 EPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQSEAATGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE-FHARMSDDLNTSH 297
A A+ Y A +Q+ + N D +++ E F+A M DD NT+
Sbjct: 315 EAKTALTRFYH-------AFKAYQQ-----QFNEELTDHFSQIHLERFNAAMCDDFNTAE 362
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A LN K++ +Q +LR + N ILGL+
Sbjct: 363 AMAVLFELA-----KELNRALKEENAEQAKVFYSTLRHLTN-------ILGLVQHNVDDF 410
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ + +AL L+E ++ +LI++R A+K KDF+K+D IR +L +G+ L D + T
Sbjct: 411 LRSDIGQEALG---LSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQGVVLEDTRQGT 467
Query: 418 IWR 420
+WR
Sbjct: 468 LWR 470
>gi|421857183|ref|ZP_16289537.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187405|dbj|GAB75738.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 473
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 260/423 (61%), Gaps = 31/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE +L++R+ Q D L CL P PR +++++Q+++MI ++++N
Sbjct: 75 KIIKRANENGETIQALTDRFIQAMNEDAHRLGCLEPDEAPRATEYIDQMQNMIGKLVDNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F VE+ YGRLSG++L++ +AG +RV V+ K++P DF LWK AK
Sbjct: 135 SAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEVDKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP W+SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS AA +
Sbjct: 195 EPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQSEAATGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE-FHARMSDDLNTSH 297
A A+ Y A +Q+ + N D +++ E F+A M DD NT+
Sbjct: 315 EAKTALTRFYH-------AFKAYQQ-----QFNEELTDHFSQIHLERFNAAMCDDFNTAE 362
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A LN K++ +Q +LR + N ILGL+
Sbjct: 363 AMAVLFELA-----KELNRALKEENAEQAKVFYSTLRHLTN-------ILGLVQHNVDDF 410
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ + +AL L+E ++ +LI++R A+K KDF+K+D IR +L +G+ L D + T
Sbjct: 411 LRSDIGQEALG---LSESEIEELIQQRVDAKKAKDFTKADSIRQNLLDQGVVLEDTRQGT 467
Query: 418 IWR 420
+WR
Sbjct: 468 LWR 470
>gi|404491639|ref|YP_006715745.1| cysteinyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|109894916|sp|Q3A8C9.1|SYC_PELCD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 481
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/426 (42%), Positives = 254/426 (59%), Gaps = 27/426 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G + +L+ + Q + DM L PT QP+ + H++ I +++ ++I+
Sbjct: 74 KIIKRANERGISSDTLAGEFIQAFDEDMNRLGLAEPTIQPKATCHIDHIVNLVQRLIDRG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+VE P+Y +LS + ++ R+G R+ +KRNP DFALWKAAK GEPS
Sbjct: 134 IAYESQGDVYFSVEDFPSYLKLSKRNMDEMRSGARITPGEQKRNPMDFALWKAAKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQS A V Y
Sbjct: 194 WESPWGPGRPGWHIECSAMSMEYLGESFDIHGGGKDLVFPHHENEIAQSEGATGKPFVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTIR I + Y P LR F+++AHYRSP+++S
Sbjct: 254 WLHNGFVNVNQEKMSKSLGNFFTIRDILQTYDPEVLRFFILTAHYRSPIDFSD------- 306
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-------EDCINKLRDEFHARMSDDLN 294
Q LQD + LS F E A AA + L + F M DD N
Sbjct: 307 -------QNLQDARLGLSRFYEGLHAASEVLAACPPGDVTSEAGATLENVFREAMDDDFN 359
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T+ + G DA++ IN L K + +++++ + +L ++ VL + + P A
Sbjct: 360 TAAAI-GHLFDAVRTIN-RLITEKGFRKNREKVAQVRALYDALLKLGGVLGLF-VSDPAA 416
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ L+Q+ L TE D+ I +R ARKNKDF+++D+IR +L KGI L+D
Sbjct: 417 W---LKQMNLAMLATTGYTESDIEDFIRQRQEARKNKDFARADEIRDELAAKGIQLLDGP 473
Query: 415 KETIWR 420
+ T W+
Sbjct: 474 QGTAWK 479
>gi|187631658|sp|Q0A7N3.2|SYC_ALHEH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 462
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/423 (43%), Positives = 244/423 (57%), Gaps = 39/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA +LGE +++ R+ + D L LPP ++PR + H++ I MI +++
Sbjct: 73 KIIRRAAELGEPMGAVTERFIRAMHEDAEALGVLPPDHEPRATGHIDDIIAMIERLVERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV+FAV P YG+LSG+R E+ RAG RV VD KR+P DFALWKAA+ GEP
Sbjct: 133 HAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDEGKRDPVDFALWKAARPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAMS L FDIHGGG+DL FPHHENEIAQS A V+
Sbjct: 193 AWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFPHHENEIAQSECATGHPFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNGHV N+EKM+KSLGNFFT+R++ + A+R FL+S+HYRSPLNYS+ L A
Sbjct: 253 YWMHNGHVRINDEKMAKSLGNFFTVREVLSEHRAEAVRLFLLSSHYRSPLNYSLDGLRQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ A P E R FHA M DD NT L
Sbjct: 313 QGALERLYLALRGLPEA--------------PVPEADPQGFRARFHAAMDDDFNTPEALA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ + LR + +LGL LQ
Sbjct: 359 VLFE-----LAREVNRLRQGDDDAGAAAPGALLRVLGG-------VLGL---------LQ 397
Query: 361 QLKDKALKRAELT---EEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
++ L+ + + ++ L+ R ARKN+DF+++D+IR +L +GI L D + T
Sbjct: 398 DDPERFLRGGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILEDGPQGT 457
Query: 418 IWR 420
WR
Sbjct: 458 TWR 460
>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 485
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/423 (43%), Positives = 244/423 (57%), Gaps = 39/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA +LGE +++ R+ + D L LPP ++PR + H++ I MI +++
Sbjct: 96 KIIRRAAELGEPMGAVTERFIRAMHEDAEALGVLPPDHEPRATGHIDDIIAMIERLVERG 155
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV+FAV P YG+LSG+R E+ RAG RV VD KR+P DFALWKAA+ GEP
Sbjct: 156 HAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDEGKRDPVDFALWKAARPGEP 215
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAMS L FDIHGGG+DL FPHHENEIAQS A V+
Sbjct: 216 AWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFPHHENEIAQSECATGHPFVN 275
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNGHV N+EKM+KSLGNFFT+R++ + A+R FL+S+HYRSPLNYS+ L A
Sbjct: 276 YWMHNGHVRINDEKMAKSLGNFFTVREVLSEHRAEAVRLFLLSSHYRSPLNYSLDGLRQA 335
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ A P E R FHA M DD NT L
Sbjct: 336 QGALERLYLALRGLPEA--------------PVPEADPQGFRARFHAAMDDDFNTPEALA 381
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ + LR + +LGL LQ
Sbjct: 382 VLFE-----LAREVNRLRQGDDDAGAAAPGALLRVLGG-------VLGL---------LQ 420
Query: 361 QLKDKALKRAELT---EEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
++ L+ + + ++ L+ R ARKN+DF+++D+IR +L +GI L D + T
Sbjct: 421 DDPERFLRGGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILEDGPQGT 480
Query: 418 IWR 420
WR
Sbjct: 481 TWR 483
>gi|414153547|ref|ZP_11409870.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454945|emb|CCO07774.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 486
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/419 (43%), Positives = 247/419 (58%), Gaps = 7/419 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + +PL L+ RY +E+ D L + P+VS+H+ +I D+I Q+
Sbjct: 72 KIIKRAWEEQTDPLELAQRYIREFFKDADALNVMRADKHPKVSEHIAEIIDLIKQLEQQG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV +GDV+FAV P YG+LSG+ LE+ +AG RV +D RK++P DFALWKAAK GEPS
Sbjct: 132 HAYVADGDVYFAVRSFPGYGKLSGRSLEDMQAGARVEIDPRKKDPMDFALWKAAKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+A YL + FDIHGGG DLIFPHHENEIAQS AAC Y
Sbjct: 192 WPSPWGAGRPGWHIECSAMAAKYLGNGFDIHGGGFDLIFPHHENEIAQSEAACGQPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG +T N EKMSKSLGNFF +R+I ++ P +R +L+S HYRSPL++ +L A
Sbjct: 252 WMHNGFITVNQEKMSKSLGNFFLVREILAKFPPEVVRWYLLSTHYRSPLDFDDEKLAMAG 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + L+ AL Q+ A D + LR +F M DD NT+ ++
Sbjct: 312 KGLERLKTALRLLYEALELPQQQAAMADEGGDLADKLATLRLDFEKAMDDDFNTALAISV 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A K IN + L K +Q+ + L K + K+ +LG+ S L
Sbjct: 372 FFELA-KEINIFVGRLDGKLTDRQK----DLLVKAHDLFKDFNGVLGVFKEDQQSGRL-- 424
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L D +L + + +++ R AAR KD++ +D IR L G+ L D + W+
Sbjct: 425 LIDAVNTDNKLVDGLINLIVKVRQAARSQKDWATADTIRDGLKELGVILEDTPQGVRWK 483
>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
gi|259511834|sp|C6E7P0.1|SYC_GEOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
Length = 480
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 248/421 (58%), Gaps = 18/421 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G +S R+ +E+ DMA L PT+QP+ ++H+ +I +++ ++I+
Sbjct: 74 KIINRANRDGVAYNEISERFIKEFDNDMARLMLQLPTFQPKATEHIPEIINLVQKLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY DVF+ V++ Y +LS + LE+ +AG R+ VD RK +P DFALWK AK GEP
Sbjct: 134 FAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDERKEHPMDFALWKGAKPGEPY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIAQS AA V Y
Sbjct: 194 WESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIAQSEAASGKPFVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N+EKMSKSLGNFFTI++I E Y LR FL+SAHYRSP+++S L A
Sbjct: 254 WLHNGFVNINSEKMSKSLGNFFTIKEILESYDAEVLRFFLLSAHYRSPIDFSDQNLKEAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ IY+ L + L+ H N + + F M DD NT+ L G
Sbjct: 314 LGLERIYKALAGIDERLAS-GAHTPADADNTEFAEKVAGFAGRFGDAMDDDFNTALAL-G 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEVL 359
D ++ IN L L+E K++ EV ++ +LG+ P A+ L
Sbjct: 372 HLFDLVRVINREL--------PTASTGLLE---KVKAEVAKMAAVLGICDSVPAAF---L 417
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q++KD+ E++ E++ LI ERA ARK K+F + D+IR L K I L+D + T W
Sbjct: 418 QRMKDRKTSDMEMSAEEIETLIAERAEARKAKNFKRGDEIRDLLLEKNIVLLDSAQGTTW 477
Query: 420 R 420
+
Sbjct: 478 K 478
>gi|341581496|ref|YP_004761988.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
gi|340809154|gb|AEK72311.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
Length = 476
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/420 (42%), Positives = 247/420 (58%), Gaps = 22/420 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ GE+P L+ R+ + +L DM L+ P PRV++HM+ I + + ++
Sbjct: 74 KIIRRANETGEDPKELAERFLRLFLEDMEALKVKPADVYPRVTEHMDDIIEFVRKLQEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V++ +YG+LSG +LE R G RV K+NP DFALWK AK GEP
Sbjct: 134 YAYEGSDGVYFEVQRFKDYGKLSGIKLEELRKGARVEPGEGKKNPEDFALWKKAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQ+ A V Y
Sbjct: 194 WESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQTEACTGHEWVHY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G + N EKMSKSLGNF TIR++ ERY+P +R F++ HYRSPL+Y+ ++ A
Sbjct: 254 WLHTGFLMVNGEKMSKSLGNFVTIREMLERYNPEVIRLFILQRHYRSPLDYTEEGMEHAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ VA+ K A + I R++FH M DD NT+ L
Sbjct: 314 NNLERLYNTLENIRVAMERADIAFKWGPEEFEAYEAIRNAREKFHEAMDDDFNTAEALKA 373
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A +N L +++K PK+ L + E R++ SEV
Sbjct: 374 VFE-ASNAVNRYLTVVEK--PKESIL----------RKALEFFRMV--------SEVFGI 412
Query: 362 LKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+D ++ EE ++Q LI+ RA RK K+F+ +D+IRA+L GI L D + T+W+
Sbjct: 413 FEDYFREQRAGEEEALIQLLIDVRAQLRKEKNFALADKIRAELREMGIQLEDTPQGTVWK 472
>gi|352684343|ref|YP_004896328.1| cysteinyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
gi|350278998|gb|AEQ22188.1| cysteinyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
Length = 474
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/427 (43%), Positives = 243/427 (56%), Gaps = 28/427 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR AN G ++NRY + Y M L PRVSDH+ I + Q+I++
Sbjct: 66 KIIREANKEGVTWDVIANRYIKAYFEVMDKLHVRRAHVYPRVSDHIPDIIHTVQQLIDHG 125
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
YVV+GDV++ VEK +YG LSG+ L++ AG RV VD RK NP DFALWK+AK GEPS
Sbjct: 126 YGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVDERKENPMDFALWKSAKPGEPS 185
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS-CAACQDSNVS 180
WDSPWG GRPGWHIECS MS YL S FD HGGG DLIFPHHENEIAQS A C V
Sbjct: 186 WDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIFPHHENEIAQSEGATCCHPFVR 245
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG +T N EKMSKSLGNFFT+ I + Y P LR+F++ HYRSPL++S +L A
Sbjct: 246 YWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLRYFILQTHYRSPLDFSDARLKEA 305
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINP-----AAEDCINKLRDEFHARMSDDLNT 295
S ++L+ A E + P A + ++ + F M DD NT
Sbjct: 306 S-------RSLERLRTAAQNLTELKGVISVGPDEDSLALREKVSGFVESFLEAMRDDFNT 358
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PG 353
S ++ F + +N+L + Q + + ++ KE+ I+G+L PG
Sbjct: 359 SLAISYLFA-----LGKEINILHQSVMTGGQKPDGKLVDMMDKAWKEMTSIIGILEEDPG 413
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
A +E A+K A+ + LI ER ARK KDF K+D IR +L +KGI L D
Sbjct: 414 AKTE--------AVKDADEDAAAIESLIAERQEARKAKDFKKADAIRDELAQKGILLEDT 465
Query: 414 GKETIWR 420
+ W+
Sbjct: 466 PQGVRWK 472
>gi|227824943|ref|ZP_03989775.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
gi|226905442|gb|EEH91360.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
Length = 483
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/427 (43%), Positives = 243/427 (56%), Gaps = 28/427 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR AN G ++NRY + Y M L PRVSDH+ I + Q+I++
Sbjct: 75 KIIREANKEGVTWDVIANRYIKAYFEVMDKLHVRRAHVYPRVSDHIPDIIHTVQQLIDHG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
YVV+GDV++ VEK +YG LSG+ L++ AG RV VD RK NP DFALWK+AK GEPS
Sbjct: 135 YGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVDERKENPMDFALWKSAKPGEPS 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS-CAACQDSNVS 180
WDSPWG GRPGWHIECS MS YL S FD HGGG DLIFPHHENEIAQS A C V
Sbjct: 195 WDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIFPHHENEIAQSEGATCCHPFVR 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG +T N EKMSKSLGNFFT+ I + Y P LR+F++ HYRSPL++S +L A
Sbjct: 255 YWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLRYFILQTHYRSPLDFSDARLKEA 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINP-----AAEDCINKLRDEFHARMSDDLNT 295
S ++L+ A E + P A + ++ + F M DD NT
Sbjct: 315 S-------RSLERLRTAAQNLTELKGVISVGPDEDSLALREKVSGFVESFLEAMRDDFNT 367
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PG 353
S ++ F + +N+L + Q + + ++ KE+ I+G+L PG
Sbjct: 368 SLAISYLFA-----LGKEINILHQSVMTGGQKPDGKLVDMMDKAWKEMTSIIGILEEDPG 422
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
A +E A+K A+ + LI ER ARK KDF K+D IR +L +KGI L D
Sbjct: 423 AKTE--------AVKDADEDAAAIESLIAERQEARKAKDFKKADAIRDELAQKGILLEDT 474
Query: 414 GKETIWR 420
+ W+
Sbjct: 475 PQGVRWK 481
>gi|358012794|ref|ZP_09144604.1| cysteinyl-tRNA synthetase [Acinetobacter sp. P8-3-8]
Length = 473
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 254/423 (60%), Gaps = 31/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ R+ D A L CL P PR +D+++Q+++MI ++N
Sbjct: 75 KIIARANENGESISALTERFIIAMNDDAARLGCLEPDEAPRATDYIDQMQNMIGNLVNKG 134
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY E GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 TAYPSENGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTDEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDFALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A + Y A +Q+ T + + + F+A MSDD NT+
Sbjct: 315 EAKTTLSRFYH-------AFKAYQQVYGTKTVTTLDTSFVER----FNAAMSDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ I LN K++ + Q +LR + + IL L+ +V
Sbjct: 364 IAVLFE-----IIKELNRAVKEENEAQATIFYSTLRHLTH-------ILALVQ----YDV 407
Query: 359 LQQLK-DKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ LK D ++ L+E ++ LI++R A+KNKDF+ +D IR L +G+ L D + T
Sbjct: 408 DEFLKSDIGQEQLGLSEAEIEDLIQQRVDAKKNKDFANADAIRQSLLDQGVVLEDTRQGT 467
Query: 418 IWR 420
+WR
Sbjct: 468 VWR 470
>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
Length = 463
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 181/420 (43%), Positives = 255/420 (60%), Gaps = 32/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ L++R+ Q D L + P +PR + + +I MI +++ +
Sbjct: 73 KIIQRANENGEDINQLTDRFIQAMYEDTDALNVIRPDIEPRATQSIPEIVAMIQSLLDKN 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ + GDV +A+++ NYG+LSG+ L++ RAGERV V+ K++P DF LWK AK GEP
Sbjct: 133 YAYLTDNGDVCYAIQRFENYGQLSGKHLDDLRAGERVEVNESKQHPLDFVLWKTAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAMS H L + FDIHGGG+DL FPHHENEIAQS A ++ V+
Sbjct: 193 SWESPWGAGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFPHHENEIAQSEGATGETFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V N+EKMSKSL NFFT+R++ ERY P +R+F++++HYRS LNYS +L++A
Sbjct: 253 VWMHNGFVRINDEKMSKSLNNFFTVREVLERYQPEVVRYFILTSHYRSELNYSEQELEAA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y ++D P + P +D N+ F M+DD NT L
Sbjct: 313 KQSITRLYIAIRDL-----PNTDE-------PCPDDSYNQ---RFLTAMNDDFNTPEALA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F ++ +N+L++K+ + + L E L L P + +
Sbjct: 358 ALFS-----LSKEINILRRKK-VSEAIPLAS-----ELRRLGNLLGLLQAKPETFLQGTS 406
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q K+ L E+ QLI ER ARKN+DF+ +DQIRADLT KGI L D + T WR
Sbjct: 407 QEKEPGLSVTEIE-----QLIVERIDARKNRDFATADQIRADLTAKGIILEDNAQGTSWR 461
>gi|224369425|ref|YP_002603589.1| protein CysS2 [Desulfobacterium autotrophicum HRM2]
gi|223692142|gb|ACN15425.1| CysS2 [Desulfobacterium autotrophicum HRM2]
Length = 477
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 179/423 (42%), Positives = 253/423 (59%), Gaps = 25/423 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+LG++P +S RY +E+ +M L L PT +P+ ++H++ I D I ++I+
Sbjct: 74 KIINRANELGQDPKEISERYIKEFHNEMDALNVLRPTIEPKATEHIQDIIDFIQRLIDKG 133
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY V G DVFF+++ YG+LSG+ ++ G R+AVD +KR+P DF LWK K GEP
Sbjct: 134 KAYHVPGSDVFFSIQSFDEYGKLSGRNPDDMMPGSRIAVDDKKRDPKDFTLWKPVKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS AA + V
Sbjct: 194 SWPSPWGDGRPGWHIECSAMSYKYLGESFDIHGGGKDLIFPHHENEIAQSEAAFGKTFVR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V NNEKMSKSLGNF I+ + + YHP +R FL+S HYRSP++Y+ +D
Sbjct: 254 YWIHNGFVDINNEKMSKSLGNFTMIKDVLKDYHPEVMRMFLLSKHYRSPIDYNDTSMDEV 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTAR-INPAAEDCINKLRDEFHARMSDDLNTSHIL 299
+ +Y ++ + A G T + P E F A M DD NT+ +
Sbjct: 314 ISGLDRLYAFVERAQGA-------GATVNGVEPGKEWA------SFEAAMDDDFNTARAM 360
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSE 357
F D +K N L+ +Q + + ++ + ++K + ILG+L P Y
Sbjct: 361 ATLF-DTVKTGNRILD----QQGETVSPETLSAVSTLCADLKRMGSILGILAQEPQDY-- 413
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ K+ L +L + + +LI+ER AAR++K+F+++D+IRA+L I L D T
Sbjct: 414 -FRAKKESGLAGKDLDGDAIERLIQERVAARQSKNFARADEIRAELDAMNIVLEDGPDGT 472
Query: 418 IWR 420
W+
Sbjct: 473 TWK 475
>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 473
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 252/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ L++R+ D A L CL P P+ +D+++Q++ MI +++
Sbjct: 75 KIIKRANENGESISELTSRFIDAMNEDFAKLGCLAPDVAPKATDYIDQMQAMIGNLVDKG 134
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 TAYPSNNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLTFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+NYS + L
Sbjct: 255 VNYWMHAGFINVDGEKMSKSLGNFFTIRDVIEKFHPEVVRYFIVSSHYRSPVNYSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A + + Y + + + + +H E L + F+A M DD NT
Sbjct: 315 EAKNTLSRFYHSFKTYQAV---YGDH--------LIETLDEALVERFNAAMRDDFNTPEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ IN LN K++ +Q +LR + N ILGL+ +
Sbjct: 364 IAVLFE-----INKELNRTVKEENAEQAAIYYATLRHLTN-------ILGLVQQNVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L+ E + LI++R A+K K+F+++D+IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALG---LSPEQIEDLIQQRQDAKKAKEFARADEIRQSLLDQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|392407156|ref|YP_006443764.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620292|gb|AFM21439.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
Length = 474
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 252/420 (60%), Gaps = 24/420 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I +AN+LG L+ R+ + Y D+ L T P ++H+++I +I++I+
Sbjct: 74 KMINKANELGITVKELAERFIKAYFEDVTPLGVRHATVHPLATEHIDEIIALISRIMERG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVVEG+V+F V+ P YG+LSGQ LE +AG R+ VD+RK++P DF LWKA K GEP
Sbjct: 134 HAYVVEGNVYFDVKSFPGYGKLSGQGLEELQAGARIEVDARKKHPLDFVLWKARKPGEPW 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAM+ YL DIHGGG DLIFPHHENEIAQS AA V Y
Sbjct: 194 WDSPWGPGRPGWHIECSAMAMKYLGETIDIHGGGSDLIFPHHENEIAQSEAATGKQFVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ N EKMSKSLGN T R++ +Y PLA+R F++ AHYRSPL++S L A
Sbjct: 254 WIHNGYLLINKEKMSKSLGNILTARELIGKYQPLAVRLFILGAHYRSPLDFSEESLTQAV 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ Q L++C L + E + + +D I K +F + DD NT+ L
Sbjct: 314 RSM----QRLRNCYSDLIFYMERSEEKDTPDTWLDDVIRKGYIKFCEALDDDFNTAGALG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ I LN K + +LI + +K + V+E++ ++G+ A +E
Sbjct: 370 SVFE-----IVRDLNNYLKDSASLDKNALINA-KKFFDAVEEIMGVIGIDTIFATAE--- 420
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
EL+ +++ +LI+ER AR+ +DF+++D IR +L KGI L D T W+
Sbjct: 421 ----------ELSPDEIEKLIKERNEARRKRDFARADAIRNELASKGIILEDTPLGTRWK 470
>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226735066|sp|B5YID4.1|SYC_THEYD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 487
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 246/423 (58%), Gaps = 15/423 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G + ++ +Y EY DM L +P+ ++H+ ++ ++I +IN
Sbjct: 72 KIINRANKEGVSWKEIAEKYTGEYYKDMDRLGITRADIEPKATEHINEMIEIIQTLINKG 131
Query: 62 CAYVVE----GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKA 117
AY +E V+F+VEK P YG+LS ++++ +G RV VD RK++P DFALWKA+K
Sbjct: 132 YAYEIEEGQAKSVYFSVEKFPQYGKLSKKKIDELISGARVEVDERKKSPLDFALWKASKP 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS A
Sbjct: 192 GEPWWDSPWGKGRPGWHIECSAMSIKYLGETFDIHGGGADLIFPHHENEIAQSEAFTGKP 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
YW+HNG VT N EKMSKSLGN IR + + Y ALR FL+S+HYRSP+ ++ +
Sbjct: 252 FAKYWIHNGFVTINKEKMSKSLGNVLNIRDLLDIYDAEALRLFLLSSHYRSPIEFAHEYI 311
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
A V +Y T+ E + + K++ + + L+ EF M DD NT+
Sbjct: 312 KEAEATVDRVYSTIMRIE-DFEKIEINDKSSIEFDKVKAMLENLKPEFEKAMDDDFNTAK 370
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L F+ FI + KK + +++ + + ++ E+ VL + P Y +
Sbjct: 371 ALGILFE----FIKEINRFMDKKPSQNKEIDFLVTAKRAIKEIGSVLNLFQRQPVDWYRD 426
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+L+ +K+ + EE++ +LI+ER ARKNKD+ K+D IR L KGI L D T
Sbjct: 427 LLK------VKKIAIKEEEINRLIKERTEARKNKDWKKADSIREQLLSKGIILEDKPDRT 480
Query: 418 IWR 420
IW+
Sbjct: 481 IWK 483
>gi|387126947|ref|YP_006295552.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
gi|386274009|gb|AFI83907.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
Length = 436
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/420 (43%), Positives = 251/420 (59%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE +L++RY +E D L L P +PR ++ M+ + DMI +I+
Sbjct: 49 KIIKRAAENGETIQTLTDRYIKEMHADADALGVLRPDREPRATEAMQPMLDMIQTLIDKG 108
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV++ V + YG+LSG+++++ RAGER+AV+ K +P DF LWKAAK EP
Sbjct: 109 LAYVAENGDVYYDVSEFSGYGKLSGRQVDDLRAGERIAVNEAKTDPLDFVLWKAAKPEEP 168
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAMSA L FDIHGGG DL FPHHENEIAQS A +V+
Sbjct: 169 AWDSPWGPGRPGWHIECSAMSAECLGHHFDIHGGGQDLQFPHHENEIAQSEGAHGCQSVN 228
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V ++EKMSKSLGNFFT+R++ +Y A+R+F++ +HYRSPLNY+ QL+ A
Sbjct: 229 YWMHNGFVRIDDEKMSKSLGNFFTVREVLAKYPAEAVRYFILMSHYRSPLNYAEDQLEQA 288
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y +L+D ++E + A F M DD NT+ L+
Sbjct: 289 KTALTRFYHSLRDVTPETVSWREDAEFA--------------SRFAEAMDDDFNTALALS 334
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
L + +LN+ +++ +Q+ L L +LGL A + +
Sbjct: 335 -----VLADVRQALNIAREENDEQKSAYLAGLLLAFGE-------VLGLFQQSAEAFLTG 382
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+D+A K + QLI ER AAR KD+S++DQ+R +LT GI L D +T WR
Sbjct: 383 GQQDEAGK--------IEQLIAERNAARAAKDWSRADQVRDELTAMGIVLEDAAGKTSWR 434
>gi|88811742|ref|ZP_01126996.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
gi|88791133|gb|EAR22246.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
Length = 469
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/427 (44%), Positives = 249/427 (58%), Gaps = 43/427 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA +LGE L+ R+ D A L CL P +PR + +M+ I +I ++++
Sbjct: 73 KIIRRAAELGEPVNVLTERFIAAMHADTAALGCLLPDAEPRATAYMDAIVALIQRLLDRG 132
Query: 62 CAY--VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGE 119
AY V EG +++AVE+ YGRLSG+RLE RAG RV + KR+ ADF LWKAAK GE
Sbjct: 133 YAYQAVDEGSIYYAVERFEGYGRLSGERLEALRAGARVEPGAGKRDAADFVLWKAAKPGE 192
Query: 120 PSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNV 179
PSW +PWG GRPGWHIECSAM+ L FDIHGGG+DL FPHHENEIAQS AA V
Sbjct: 193 PSWPAPWGEGRPGWHIECSAMAGACLGQHFDIHGGGLDLKFPHHENEIAQSEAAWGGRYV 252
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
++WMHNGH+ N+EKMSKSLGNFFT+R++ + Y +R+FL+S+HYRSPLNYS LD+
Sbjct: 253 NFWMHNGHIRINDEKMSKSLGNFFTVREVLQVYRAEEIRYFLLSSHYRSPLNYSTSDLDN 312
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
+ A+ +Y L+D PF E A+ R+ F M DD NT L
Sbjct: 313 SRAALERLYLALRDL-----PFTE---------ASPALAAPYREAFRQAMDDDFNTPLAL 358
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE------VKEVLRILGLLPPG 353
F D + IN ++ + + Q +L +LR++ EV L G
Sbjct: 359 AVLF-DLAREINR-----RRDRFESQAAALAATLRELGGLLGLAQVAPEV-----FLKGG 407
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
A S V + E V L+ ERA ARKN+DF+ +D+IR +L +GIAL D
Sbjct: 408 AGSSVA----------VGIASERVEALLAERALARKNRDFATADRIRDELQAQGIALEDT 457
Query: 414 GKETIWR 420
+ T WR
Sbjct: 458 PQGTAWR 464
>gi|114777193|ref|ZP_01452204.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114552338|gb|EAU54821.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 459
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/420 (42%), Positives = 237/420 (56%), Gaps = 37/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G +L+N + D L CL PT++PR + HM+ + MI ++ D
Sbjct: 74 KIIKRAAERGIAIDALTNEMIDAFHADADALGCLRPTHEPRATAHMDAMISMIQALMEKD 133
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV +AV +YG+LSG++++ +G RV VD KR+P DF LWK AKA EP
Sbjct: 134 MAYVSESGDVLYAVRGFSDYGQLSGKKIDELESGSRVDVDQSKRDPLDFVLWKMAKADEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAMS +L FDIHGGG+DL FPHHENEIAQ+ AA
Sbjct: 194 AWASPWGQGRPGWHIECSAMSCGHLGDTFDIHGGGMDLKFPHHENEIAQARAANGGGFAR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N EKMSKSLGNFFTIR++TERYHP LR F++ HYRSPL++S LD A
Sbjct: 254 YWLHNGFVNINAEKMSKSLGNFFTIREVTERYHPEVLRMFMLGTHYRSPLDFSDAALDVA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y+T + C QE G T A L F M DD NT L
Sbjct: 314 KSGLDRLYKTAKRC-------QESGVTGAGGQAL------LPHHFTTAMDDDFNTPEALA 360
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D + +N LN + Q + + +L LG ++Q
Sbjct: 361 VLF-DTSRALNKGLNEAQDVTALAGQFTAMSAL-------------LG---------IVQ 397
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q + ++ + LIEER ARKN+DF+++D IR +L+ +GI L D T W+
Sbjct: 398 QDTAIWFQSGDVDAAAIEALIEERLQARKNRDFARADAIRNELSAQGIVLEDSASGTTWK 457
>gi|297568576|ref|YP_003689920.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
gi|296924491|gb|ADH85301.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
Length = 494
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/436 (41%), Positives = 256/436 (58%), Gaps = 25/436 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G LS R+ ++ DM L LPPT +P ++H+ ++ MI +++ D
Sbjct: 74 KIIKRAQEQGTTCTELSQRFIAKFHEDMTALNTLPPTLEPLATEHLPEMIAMIEELVAKD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV++ V++ YG LSG+ LE+ +AG RVAV+ K +P DF LWKA+K GEP+
Sbjct: 134 LAYEAQGDVYYRVQRFAGYGVLSGRGLEDMQAGARVAVNDNKEHPMDFVLWKASKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAM YL FDIHGGG DL+FPHHENEIAQS A S +
Sbjct: 194 WDSPWGPGRPGWHIECSAMGKKYLGETFDIHGGGKDLVFPHHENEIAQSEGASGKSFANL 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+G VT +EKMSKSLGNF TIR++ ER+ ALR F+ S HYR+PL+YS L A
Sbjct: 254 WVHHGFVTIKDEKMSKSLGNFLTIREVLERHPAEALRLFVFSTHYRNPLDYSETALQDAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-------EDCINKLRDEFHARMSDDLN 294
A+ IY L + Q G +P+A D + KL FH M D N
Sbjct: 314 AALTRIYSALA------ATAQLPGAAGDPSPSASVVGEKDRDKLAKLEQSFHQAMDIDFN 367
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PP 352
++ L F DA+K IN L P Q L L L++ ++++ + GL P
Sbjct: 368 SALALGRIF-DAIKIINKVRQALPAN-PAPQDLQL---LQQTAATIRDLTAVFGLAQEEP 422
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
++ E QQ + L + + ++ L+E+R AR++KD++++D+IR L ++ I + D
Sbjct: 423 VSWLEKRQQ---RLLAQLSIKPAEIEALLEQREQARRDKDWAEADRIRDQLLQQRIVIKD 479
Query: 413 MGKETIWRPCVLVEQE 428
T W VL EQ+
Sbjct: 480 GPDGTKWE--VLQEQQ 493
>gi|262199957|ref|YP_003271166.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
gi|262083304|gb|ACY19273.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
Length = 495
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/433 (43%), Positives = 263/433 (60%), Gaps = 29/433 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I RA + GE PL+L+ R+ EY DMA L P +PRVS H+E I +I II+N
Sbjct: 75 KIFARAAENGEEPLALAERFAAEYNADMARFGVLAPDIEPRVSTHIEDIVGLIQGIIDNG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+VE YG+LSGQ L++ RAG RV VD+RK+ PADFALWK+AK GE +
Sbjct: 135 AAYPVDGDVYFSVEAFKPYGQLSGQSLDDLRAGARVEVDARKKAPADFALWKSAKPGELA 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA-CQDSNVS 180
WD+PWG GRPGWHIECSAMS +L FDIHGGG DL+FPHHENEIAQS AA +D+
Sbjct: 195 WDAPWGRGRPGWHIECSAMSLRHLGQTFDIHGGGKDLVFPHHENEIAQSQAAHGEDTFAR 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG + + EKMSKSLGN F RQI + P ALR F +S HYRSP+N+ V ++D
Sbjct: 255 YWMHNGFLNFSGEKMSKSLGNVFGCRQIADAVGPEALRFFSVSHHYRSPVNFEVDEVDGV 314
Query: 241 SDAVF-----------YIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 289
+ VF Y Y TL+ + L+ ++ G+ + P A+ + R+ +
Sbjct: 315 T--VFRDLEVADRRLDYFYSTLRRLDDFLATGKDPGE-GEVVPEADKLVPAAREA----L 367
Query: 290 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 349
+DD NT I+ A +A K N L+ K PK + +L+K+ E++EV +G+
Sbjct: 368 ADDFNTP-IVIAALGEAAKLANKLLDE-PKSAPKPVRR---RTLQKLARELREVGSAIGV 422
Query: 350 L--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 407
L P A+ L + +++ + + +V L+E+RA ARK KDF+ +D +R + G
Sbjct: 423 LGSEPAAF---LGERRNRLAAKRNIDPAEVATLLEQRAEARKAKDFAAADALRDQIKALG 479
Query: 408 IALMDMGKETIWR 420
+ ++D W+
Sbjct: 480 VEVLDTAHGVDWK 492
>gi|407716366|ref|YP_006837646.1| cysteinyl-tRNA synthetase [Cycloclasticus sp. P1]
gi|407256702|gb|AFT67143.1| Cysteinyl-tRNA synthetase, class Ia [Cycloclasticus sp. P1]
Length = 463
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/422 (44%), Positives = 250/422 (59%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+ + GE+ L+ R+ E D A L L P +P +D ME I MI Q+I ND
Sbjct: 75 KIITRSIESGEDFKQLTKRFIDEMHQDEASLNVLSPDIEPLATDSMEAIITMIEQLIAND 134
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV DV++ VE NYG+LSG++L++ AGERV VDS KRNP DF LWK+AK EP
Sbjct: 135 NAYVGPNNDVYYCVESFENYGQLSGRKLDDMNAGERVDVDSSKRNPFDFVLWKSAKPDEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L + FDIHGGG+DL FPHHENEIAQS AA + V+
Sbjct: 195 SWSSPWGNGRPGWHIECSAMATCCLGNHFDIHGGGMDLQFPHHENEIAQSEAATGEKYVN 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V ++EKMSKSLGNFFT+R + ++Y +R F++S+HYRSPLNYS QL +
Sbjct: 255 TWMHNGFVRIDDEKMSKSLGNFFTVRDVLKKYRGEEIRFFVLSSHYRSPLNYSDDQLTES 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D ++P + K+ I ++F M+DD N++ +
Sbjct: 315 RSALERLYTALRD----VTPVKNEVKSTYI------------EQFENAMNDDFNSAKAIA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F+ A + LN LK QP+Q + + L E LGLL P +
Sbjct: 359 VLFECA-----NELNKLKHTQPEQAAKTAADLLTMAEP--------LGLLSQDPDLF--- 402
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK A + A ++ E++ I +R A+ NK++ +DQIR L +G+ L D G ET
Sbjct: 403 ---LKSMAGQDASISNEEIEAQINQRLEAKANKNWGLADQIRDSLKEQGVILEDKGPETT 459
Query: 419 WR 420
WR
Sbjct: 460 WR 461
>gi|357419735|ref|YP_004932727.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
gi|355397201|gb|AER66630.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
Length = 476
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 252/419 (60%), Gaps = 21/419 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RA +LG L+ ++ + Y D L PT PR ++H+++I +I +I+ N
Sbjct: 75 KMINRAKELGITVPQLAEKFIEAYYEDADALGIKRPTVAPRATEHIDEIISLIEKIMKNG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV GDV+F V+ P YG+LS Q LE ++G RV ++ K++P DFALWKA K GEPS
Sbjct: 135 HAYVVNGDVYFDVQSYPEYGKLSKQTLEELQSGARVEINPNKKHPLDFALWKAKKPGEPS 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIAQ+ AA V Y
Sbjct: 195 WPSPWGEGRPGWHIECSAMAIKYLGETIDIHTGGSDLVFPHHENEIAQAEAATGKPFVKY 254
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ N EKMSKSLGNF T R+ +++HP+A+R F++SAHYR+PLN+SV L +++
Sbjct: 255 WMHNGYLMINAEKMSKSLGNFLTAREARKKFHPVAIRLFMLSAHYRTPLNFSVENLINSA 314
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +++C L +E + + + IN L+++F + + DD NT+ + G
Sbjct: 315 KGA----ERIRNCWNELLNAEERCYDSGTSMGETETINSLKEKFDSNLKDDFNTAGAI-G 369
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
+A+K +N L + + I+S + + E+L I+ ++
Sbjct: 370 VLFEAVKIVNQVL------KGNNFDKNFIDSAKALMRYADEILGII---------DINNT 414
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
LK + + EL EE + +LI ER ARK ++F+K+D+IR L+ GI L D T W+
Sbjct: 415 LKAEN-ESTELNEELINELIREREEARKQRNFAKADEIRDKLSSMGIVLEDTPSGTRWK 472
>gi|406037361|ref|ZP_11044725.1| cysteinyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 473
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 250/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE L+ R+ D A+L C+ P P+ +++++Q++ MI +++N
Sbjct: 75 KIIARANENGETIQQLTARFIDAMNEDAANLGCVLPDEAPKATEYIDQMQSMIATLVDNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 TAYPAANGDVYFEVTKFDKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDFALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + + + Q +G+ E F+A M DD NT+
Sbjct: 315 EAKTALSRFYHSFKAYQ------QMYGQ-----KTVETLEQGFVKRFNAAMRDDFNTAET 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ +Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEETAEQATVLYSTLRYLTN-------ILGLVQHDVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+++D IR L +G+ L D + TI
Sbjct: 412 KSDIGQEALS---LSDTEIENFIQQRVDAKKAKDFAQADAIRQSLLDQGVVLEDTRQGTI 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|320354379|ref|YP_004195718.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
gi|320122881|gb|ADW18427.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
Length = 487
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 178/418 (42%), Positives = 243/418 (58%), Gaps = 8/418 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ G + SL+ R+ E+ DM L L P +P+ ++H+ ++ +I +I+
Sbjct: 74 KIINRANEQGIDSASLALRFINEFYTDMDALGTLRPDLEPKATEHIPEMIGLIEDLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F VE+ YG+LSG+ L + +AG RV V+ +K +P DF LWKAAK GEP
Sbjct: 134 MAYPADGDVYFRVERFVGYGQLSGRGLADMQAGARVEVNDKKEHPMDFVLWKAAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQSC A +
Sbjct: 194 WPSPWGEGRPGWHIECSAMSRKYLGETFDIHGGGKDLVFPHHENEIAQSCGASGKPFANL 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+G VT EKMSKSLGNF TIR + ++Y P LR F+ S YR+PL+++ L A
Sbjct: 254 WMHHGFVTIKEEKMSKSLGNFLTIRDVLKQYEPEVLRLFIFSTQYRNPLDFTETALHDAR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y+ L +V P + + I + L D FH M +D NT+ L
Sbjct: 314 AGLERMYECL--AQVEDLPAEGTEGASVITDKDRTALASLVDRFHQAMDNDFNTAQALAH 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K +N L L ++ P L+L LR E +E+ +LGL+ +EV+
Sbjct: 372 LF-DTVKLLNKVLRTLPER-PAAADLNL---LRTTAAEFRELAGVLGLVQRNP-AEVVAG 425
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ K L +L EE + LI +R AR KD+S SD++R L I L D + T W
Sbjct: 426 NRAKILAGIDLDEETINGLITKRNQARAAKDWSTSDEVRDYLLEHRIVLKDSPEGTTW 483
>gi|328951998|ref|YP_004369332.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
gi|328452322|gb|AEB08151.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
Length = 490
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 177/425 (41%), Positives = 244/425 (57%), Gaps = 15/425 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + +++ Y + DMA L P +P+ +DH+++I I + +
Sbjct: 72 KIIQRAEREHTSWKTVAETYIASFQRDMAALGVAPADIEPKATDHIDEIIGFIQVLEDQG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F V K P YG+LSG+ L++ AG RV V+ +K NP DFALWKA+K GEP+
Sbjct: 132 LAYQRNGDVYFPVAKFPGYGKLSGRSLDDMLAGARVDVNIQKDNPFDFALWKASKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMS HYL FDIHGGG DLIFPHHENEIAQS AA Y
Sbjct: 192 WDSPWGPGRPGWHIECSAMSRHYLGETFDIHGGGADLIFPHHENEIAQSEAAHGKPLARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT N EKMSKSLGNFFTIR++ ++HP +R FLI HYRSPL++S L A
Sbjct: 252 WLHNGMVTVNQEKMSKSLGNFFTIREVLAKFHPEVVRFFLIQNHYRSPLDFSDQALAEAE 311
Query: 242 DAVFYIYQTLQDCEVALSPFQE------HGKTARINPAAEDCINKLRDEFHARMSDDLNT 295
+A+ +Y TL + P + ++ + + +R F M DD NT
Sbjct: 312 NALERLYSTLARLDQTTGPIAAPEAISGAFSLSGLDSEEQSRLLTIRSRFLEAMDDDFNT 371
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ L G DA++ +N +++ +S + R+ + +L +L P
Sbjct: 372 AQAL-GVLFDAVRLLN---RIVEHNPSGNADMSALAWTRRELTVLGGILNLLQQDP---- 423
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
+LQ L+ K + ++ +LI RA ARK +DF+K+D IR L G+ L D +
Sbjct: 424 QTMLQNLRQKT-DALTIPPSEIERLIAARAEARKQRDFTKADAIRQQLAEAGVLLEDTPQ 482
Query: 416 ETIWR 420
+WR
Sbjct: 483 GAVWR 487
>gi|442803750|ref|YP_007371899.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739600|gb|AGC67289.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 462
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/414 (42%), Positives = 238/414 (57%), Gaps = 36/414 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IRRAN+ G+ ++ +Y +EY VD L PTY PR +++++ I DMI +++
Sbjct: 72 KMIRRANEEGKTVAEIAEKYIREYYVDAHGLGIKDPTYAPRATENIDAIIDMIKTLVDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F K YG+LSG RLE+ G R+ VD RK N DFALWKA K GEP+
Sbjct: 132 YAYVVDGDVYFKTSKFEEYGKLSGHRLEDLELGARIEVDERKENAMDFALWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DLIFPHHENEIAQS A Y
Sbjct: 192 WDSPWGKGRPGWHIECSAMANRYLGETIDIHSGGQDLIFPHHENEIAQSEACNGKPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + NNEKMSKS GNFFT+R I + Y +R FL+SAHYRSP+N+S L+ A
Sbjct: 252 WLHNGFININNEKMSKSRGNFFTVRDIAKHYDYEVIRFFLLSAHYRSPINFSDALLEQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
A+ IY+ + LS A + ED L RD F M DDLNT+
Sbjct: 312 SALNRIYECRDNLRFFLSK-------AEKDTFEEDIYGNLDIYRDRFIEAMEDDLNTADA 364
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L F+ ++ IN+ + K+ + L L++ E+ +LG++ +++
Sbjct: 365 LAAIFE-LVREINTRITANAGKKTISKALDLLD----------ELTGVLGIMRKEYENDL 413
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+E++ LIEER AR ++F ++D+IR L + GI L D
Sbjct: 414 ---------------DENIRALIEERQKARAERNFKRADEIRDQLRKMGIELQD 452
>gi|379335352|gb|AFD03335.1| cysteinyl-tRNA synthetase [uncultured bacterium W5-15b]
Length = 480
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 173/419 (41%), Positives = 252/419 (60%), Gaps = 19/419 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+LG +S ++ QEY DMA + P +P+V++H+EQI ++I II+
Sbjct: 79 KIINRANELGVPAKEISEKFIQEYKDDMASIGVQTPDIEPKVTEHIEQIIELIQTIIDRG 138
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
YV E DVFF+V K YG+LS + ++N G R+ V+ +K++P DFALWK AK GEPS
Sbjct: 139 HGYVSENDVFFSVRKFKGYGKLSKRSVDNMLEGVRIDVNEKKQDPLDFALWKGAKKGEPS 198
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS MS YL + F+IHGGG DLIFPHHENEIAQS AA + +
Sbjct: 199 WPSPWGNGRPGWHIECSVMSMEYLGTNFEIHGGGKDLIFPHHENEIAQSEAASGEQFAKH 258
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + N+EKMSKSLGNFFT++ +R+ P ++R F +S HY++P ++S +D
Sbjct: 259 WLHNGLIQINSEKMSKSLGNFFTVQNAVKRWTPESIRFFFLSHHYQNPADFSEQVMDDTE 318
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++ IY TL+ LS + ++P ++ + K R+ + M D+ NT+ +
Sbjct: 319 ISLERIYTTLKRAN-DLSSVSD-----SVDPELQENLEKFRENWFRAMCDNFNTADAIGN 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D ++ IN S++ ++L E+K+ ++G+L E L+
Sbjct: 373 LF-DLVRAINKSIDA----------NGWTKTLSDTLEEIKKFSSVVGILEKDP-DEYLEG 420
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
K A LT E++ LIEER R +KD++++D+IR +L KGI L D TIW+
Sbjct: 421 RKSSANLEG-LTPEEIEVLIEERKQTRTDKDWARADEIRDELDAKGIVLEDKAGGTIWK 478
>gi|302341971|ref|YP_003806500.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
gi|301638584|gb|ADK83906.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
Length = 483
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 181/422 (42%), Positives = 244/422 (57%), Gaps = 18/422 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + G L+++Y + + DMA L LPP+++PR ++H+ ++ I ++
Sbjct: 74 KIIRRAAESGLGWRELADKYIESFRQDMAALDVLPPSHEPRATEHIAEMIATIQTLMAKG 133
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +EG DV FAVE YG+LS + LE+ +AG RV VD RK+NP DF LWKA+K GEP
Sbjct: 134 HAYQIEGGDVLFAVESFDGYGKLSRRNLEDMQAGARVEVDPRKKNPMDFVLWKASKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSP GPGRPGWHIEC+AMS YL FDIHGGG DL+FPHHENEIAQ A
Sbjct: 194 SWDSPLGPGRPGWHIECTAMSGKYLGQTFDIHGGGEDLVFPHHENEIAQGEACTGHPLAH 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N+EKMSKSLGNFFTI+ I + P ALR FL+S HYRSPL++S + A
Sbjct: 254 YWLHNGFVRVNHEKMSKSLGNFFTIKDILKITRPEALRLFLLSKHYRSPLDFSDAAIKEA 313
Query: 241 SDAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ +Y LQ + A P G+ AAE I L DEF A M DD NT+
Sbjct: 314 GAGLERLYTALQAAQERAAAGPLDAAGQAL----AAE--IQALADEFEAGMDDDFNTARA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F + N L + + L+E + E+ L +L + P +E
Sbjct: 368 IGALFG-----LARLGNKLAAEPDGPAKGPLLELCARRLRELGGRLGLLRIDP----AEF 418
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ + + + D+ LI +R ARK+K+F+++D+IR L G+ L D + T
Sbjct: 419 FRGAAGQTATQGGVGAADIEALIAQRNQARKDKNFAEADRIRDQLKAMGVTLQDSPQGTT 478
Query: 419 WR 420
WR
Sbjct: 479 WR 480
>gi|312880084|ref|ZP_07739884.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783375|gb|EFQ23773.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 467
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/419 (43%), Positives = 246/419 (58%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IRRA +LG + L+ R+ Y D L T PR ++ + I ++I I++
Sbjct: 74 KMIRRAAELGISVPELAERFIAAYFEDADALGVRRATVHPRATEEIPAILELIQAILDRG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY VEGDV+F V+ P YG LS Q LE ++G RV VD RKR+P DFALWKA K GEP+
Sbjct: 134 HAYAVEGDVYFDVKSYPAYGVLSKQSLEELQSGARVEVDPRKRHPLDFALWKAQKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWH+ECSAMS +L D HGGG DLIFPHHENEIAQS AA V Y
Sbjct: 194 WKSPWGMGRPGWHVECSAMSRRHLGETLDFHGGGCDLIFPHHENEIAQSEAATGKPFVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ + EKMSKSLGNF T R+ +R+ PLA+R F++SAHYRSP+N+S L A+
Sbjct: 254 WVHNGYLMIDKEKMSKSLGNFLTAREARKRFPPLAIRLFMLSAHYRSPINFSEEGLMQAT 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A + + E AL +A + A + + R+ F A + DDLNT+ + G
Sbjct: 314 AAQERLRNGWTELEFALG---HRSASAEPDGALRRMLREGRERFLAALDDDLNTAGAI-G 369
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
D +K +NSSL ++P L + + EV+++L ILG+ P
Sbjct: 370 VVFDVVKGVNSSLG----ERP-DADLEALGQAKTFFLEVEDILGILGVAP---------- 414
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
E EEDV +LI+ER AARK +DF+++D IR +L +GI L D + W+
Sbjct: 415 --------EESLEEDVDRLIQERQAARKGRDFARADAIRDELLARGILLEDTPQGPRWK 465
>gi|345862869|ref|ZP_08815083.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345126211|gb|EGW56077.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 461
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/422 (42%), Positives = 249/422 (59%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE ++L+ R+ Q D L LPP +PR + HM++I MI ++I+N
Sbjct: 73 KIINRANENGEPFMALTERFIQAMHEDATALGVLPPDDEPRATGHMKEILVMIQRLIDNG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY VE GDV++ V P+YG+LSG+ +++ +G RV VD KR+P DFALWK+AK GEP
Sbjct: 133 HAYAVENGDVYYDVRSFPDYGKLSGKSIDDLESGARVEVDEIKRDPLDFALWKSAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A S V
Sbjct: 193 AWDSPWGQGRPGWHIECSAMSTCALGDSFDIHGGGADLTFPHHENEIAQSEGATGHSFVK 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N+EKMSKSLGNFFT+R+I +RY +R+F++++ YRSPLNY L++A
Sbjct: 253 YWMHNGFVRINDEKMSKSLGNFFTVREILQRYRAEEVRYFILTSQYRSPLNYDEEHLENA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ + + PA + + FHA M DD NT L
Sbjct: 313 RAALTRFYTALRGLD-------------EVEPAGGEA---FIERFHAVMDDDFNTPEALA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F D ++ IN + + + + E++++ +LG+L P AY
Sbjct: 357 VLF-DMVREIN------------RLRETGAAKAAGLGAELRQLGGVLGILQDDPEAY--- 400
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK L++ D+ LI++R AR K+++++D+IR +L GI L D + T
Sbjct: 401 ---LKGGVGAEGGLSDADIDALIQQRLDARAEKNWAEADRIRDELQAAGILLEDGPQGTS 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|82703002|ref|YP_412568.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|109894912|sp|Q2Y7U5.1|SYC_NITMU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|82411067|gb|ABB75176.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 464
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/425 (43%), Positives = 244/425 (57%), Gaps = 47/425 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E+ +L+ R+ Q D A L PP+++PR + H+E + MI +++
Sbjct: 73 KIIRRAQENKESIEALTARFIQAMEEDAAALGVEPPSWEPRATRHVEDMIAMIQVLVDKK 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + P YG+LSG+ L+ RAGERV VD K +P DF LWKAAK GEP
Sbjct: 133 LAYPASNGDVYYAVHRFPGYGKLSGKSLDELRAGERVIVDPHKNDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
WDSPWGPGRPGWHIECSAM HYL FDIHGGG DL FPHHENEIAQS A V+
Sbjct: 193 QWDSPWGPGRPGWHIECSAMGEHYLGEHFDIHGGGQDLQFPHHENEIAQSEGAHGHPFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N+EKMSKSLGNFFT+R+I + P +R F++ AHYRSPLNY+ +QL+ A
Sbjct: 253 YWMHNGFVRVNDEKMSKSLGNFFTVREILAHFQPEVVRFFILRAHYRSPLNYADMQLEDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ EV + D + F M+DD NT L
Sbjct: 313 GRALDRLYTALKGIEVH-------------DEVEIDWDDPYASRFREAMNDDFNTPEALA 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + + +N K + P+ ++L+++L +LGL LQ
Sbjct: 360 VLFD-----LATEVN--KTRLPR--DIALMKALGG----------VLGL---------LQ 391
Query: 361 QLKDKALKRAE-----LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
Q K ++A+ E V QLI++R AR NKD+ ++D+IR +L I L D
Sbjct: 392 QDPWKYFQQADSEDPAFAPEKVEQLIQQRLVARANKDYREADRIRKELMEANIILEDGPH 451
Query: 416 ETIWR 420
T WR
Sbjct: 452 GTTWR 456
>gi|289523037|ref|ZP_06439891.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503580|gb|EFD24744.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 475
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/420 (41%), Positives = 251/420 (59%), Gaps = 23/420 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I +AN LG L+ ++ + Y D+ L T P+ ++H++ I +I++II N
Sbjct: 74 KMINKANQLGITVKELAEQFIEAYFEDIIPLGVRQATVHPKATEHIDDIIRLISRIIENG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY+++G+V+F V+ PNYG+LSGQ LE +AG R+ VD RKR+P DF LWKA K GEP
Sbjct: 134 HAYIIDGNVYFDVKSYPNYGKLSGQSLEELQAGARIEVDERKRHPLDFVLWKAKKEGEPW 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIHGGG DLIFPHHENEIAQ+ AA V +
Sbjct: 194 WDSPWGHGRPGWHIECSAMAMKYLGDTIDIHGGGSDLIFPHHENEIAQAEAATGKQFVRF 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ N EKMSKSLGN +R+I + + PLA+R F+++AHYRSPL++S L A+
Sbjct: 254 WIHNGYLLINKEKMSKSLGNILNVREIRKNFQPLAVRLFILAAHYRSPLDFSDDSLIQAT 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ Q L++C L + E + + ED +N F + DD NT+ L
Sbjct: 314 KSL----QRLRNCYSDLLFYMERSQEKNTPDTWLEDVVNNGYKRFCNALDDDFNTAGAL- 368
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
GA + ++ +N N LK+ + +Q +L K ++ + V ILG++ E
Sbjct: 369 GAVFEVVRDLN---NYLKENETLDKQ-----ALIKSKDFFETVENILGVIGINTIGEEFA 420
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ ++ LI+ER AARK +DF+++D IR +L KGI L D T W+
Sbjct: 421 ---------GTLSSSEIEGLIKEREAARKKRDFARADAIRNELASKGIILEDTPLGTRWK 471
>gi|85858183|ref|YP_460385.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85721274|gb|ABC76217.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 550
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/431 (41%), Positives = 252/431 (58%), Gaps = 24/431 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G + ++NRY + DM L L PT PR ++H+ ++ ++I+++
Sbjct: 130 KIIARANAEGVSISEIANRYIASHDKDMDRLGVLRPTVTPRATEHIGEMIELISKLQKRG 189
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+G+V++AVE+ P YG+LSG++LE+ AG R+ V+ K NP DFALWKA+K EP+
Sbjct: 190 LAYAVDGNVYYAVERFPGYGKLSGRKLEDMMAGARIDVNEHKNNPMDFALWKASKPNEPA 249
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECS MS YL FDIHGGG DL+FPHHENEIAQS +
Sbjct: 250 WDSPWGPGRPGWHIECSVMSQKYLGDTFDIHGGGEDLVFPHHENEIAQSEGVTGKPLANI 309
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N+EKMSKSLGN FTI+++ RYH +R F++ +HYRS +++S L A
Sbjct: 310 WIHNGFVKINSEKMSKSLGNVFTIQEMLTRYHAEVIRLFMLQSHYRSAVDFSEESLSEAR 369
Query: 242 DAVFYIYQTLQDCEVAL----------SPFQEHGKTARINPAAEDCINKLRDEFHARMSD 291
+ Y TL+ + L SP GKTA + + L D F M D
Sbjct: 370 QGMDRFYGTLKAIQEVLAVAEEEASPISPETLTGKTAELYAH----VQGLPDRFVEAMDD 425
Query: 292 DLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP 351
DLNT+ + G DA + IN + K + K+ L + + I K++ +LGL
Sbjct: 426 DLNTARAI-GYLFDAARQINGFIRDAKMAKSKEGWKVLALAGKSI----KDLGYVLGLFQ 480
Query: 352 --PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 409
P Y Q +++ +++ L ++ LI +R AAR +KD+ K+D+IR LT KGI
Sbjct: 481 ENPDVY---FLQDREREIRKRGLEPAEIELLIADRWAARNDKDWHKADEIRQLLTEKGIV 537
Query: 410 LMDMGKETIWR 420
L D T W+
Sbjct: 538 LKDTPTGTTWK 548
>gi|408418553|ref|YP_006759967.1| cysteinyl-tRNA synthetase CysS [Desulfobacula toluolica Tol2]
gi|405105766|emb|CCK79263.1| CysS: cysteinyl-tRNA synthetase [Desulfobacula toluolica Tol2]
Length = 487
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 252/421 (59%), Gaps = 11/421 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+++N+ GE +++ +Y E+ +M L L PT +P+ ++H+ I D I +I+
Sbjct: 74 KIIKKSNETGEACSAITEKYIDEFHNEMDALNVLRPTVEPKATEHIRHIIDFIQMLIDKG 133
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY VEG DV+F+++ YG+LSG+ ++ RAG R+AVD +K++P DF+LWK AK GEP
Sbjct: 134 KAYPVEGGDVYFSIDSFKEYGKLSGRNPDDMRAGARIAVDDKKKSPLDFSLWKPAKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENE+AQS A V
Sbjct: 194 CWESPWGKGRPGWHIECSAMSYEYLGEGFDIHGGGKDLIFPHHENELAQSEAVFGRQFVK 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V NNEKMSKSLGNF I+++ + Y P +R FL+S HYRSP++YS +
Sbjct: 254 YWIHNGFVDINNEKMSKSLGNFTMIKEVLDTYSPEVIRMFLLSNHYRSPIDYSEDSMREV 313
Query: 241 SDAVFYIYQTLQDCEVA-LSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
S + IY L+ E A +S ++ +RI+ + + +L ++F A M+DD N++ +
Sbjct: 314 SMGLDRIYAFLERLENAGVSLYESQLDGSRIDGSRK---GELWNDFCAAMNDDFNSAKAI 370
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ K N L L+E+L N++ + +LG+ + S
Sbjct: 371 ACVFEAVKKG-----NRLLDDANDSPGADLLETLNLFYNDIHAISNVLGIFLLDSKS-YF 424
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ K+K + + + I+ER ARKNKDF+++D+IR L + L D + T W
Sbjct: 425 KAKKEKGMADMAIDPAQIEAFIQERVDARKNKDFARADEIRDHLQSINVVLEDGPQGTTW 484
Query: 420 R 420
R
Sbjct: 485 R 485
>gi|406912438|gb|EKD52050.1| hypothetical protein ACD_62C00126G0006 [uncultured bacterium]
Length = 530
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/418 (41%), Positives = 251/418 (60%), Gaps = 27/418 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR+AN + ++++Y + D L + PT +PR +DH+ I +I ++++
Sbjct: 120 KIIRKANAENISCSEVTSKYIAAFYEDTNALGLVNPTIEPRATDHIPDIIAIINKLVDKG 179
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY + GDVF+AV P YG+LSG+ +E+ +G RV V K++P DFALWK+AK EP
Sbjct: 180 LAYQIGGDVFYAVRSFPQYGKLSGKNIEDLESGARVDVSDVKKDPLDFALWKSAKPNEPK 239
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAMS YL FDIH GG DLIFPHHENEIAQS A +
Sbjct: 240 WPSPWGEGRPGWHIECSAMSTKYLGDTFDIHCGGCDLIFPHHENEIAQSEGATGKPFARF 299
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + ++EKMSKSLGNFFT R++ +++ A+RHF++SAHYRSP++YS + +
Sbjct: 300 WVHNGFLNIDSEKMSKSLGNFFTTREVLKKFPAEAIRHFILSAHYRSPIDYSEKNISDSI 359
Query: 242 DAVFYIYQTLQDCEVALS-------PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLN 294
A+ YQT E + P Q+H PA + L++EF + DDLN
Sbjct: 360 KALERFYQTKSRLEKFIQQPSDPAIPSQQH------VPAK---LENLKNEFIMALDDDLN 410
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T+ ++ F+ ++ + ++ + + Q+ + I N++ +VL + G A
Sbjct: 411 TAMVMGLVFE----WVRTWNKLIDENRANQKD---AKDFLDIINDIHKVLGVFG-SDANA 462
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
Y L +LK K + + EED+L+LIEER ARKN+DF +SD+IR L ++GI L D
Sbjct: 463 Y---LDELKQKGMAGLLVLEEDILKLIEERKLARKNRDFKRSDEIRDQLLKQGITLKD 517
>gi|345876724|ref|ZP_08828488.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226223|gb|EGV52562.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 482
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/422 (42%), Positives = 249/422 (59%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE ++L+ R+ Q D L LPP +PR + HM++I MI ++I+N
Sbjct: 94 KIINRANENGEPFMALTERFIQAMHEDATALGVLPPDDEPRATGHMKEILVMIQRLIDNG 153
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY VE GDV++ V P+YG+LSG+ +++ +G RV VD KR+P DFALWK+AK GEP
Sbjct: 154 HAYAVENGDVYYDVRSFPDYGKLSGKSIDDLESGARVEVDEIKRDPLDFALWKSAKPGEP 213
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A S V
Sbjct: 214 AWDSPWGQGRPGWHIECSAMSTCALGDSFDIHGGGADLTFPHHENEIAQSEGATGHSFVK 273
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N+EKMSKSLGNFFT+R+I +RY +R+F++++ YRSPLNY L++A
Sbjct: 274 YWMHNGFVRINDEKMSKSLGNFFTVREILQRYRAEEVRYFILTSQYRSPLNYDEEHLENA 333
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ + + PA + + FHA M DD NT L
Sbjct: 334 RAALTRFYTALRGLD-------------EVEPAGGEA---FIERFHAVMDDDFNTPEALA 377
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F D ++ IN + + + + E++++ +LG+L P AY
Sbjct: 378 VLF-DMVREIN------------RLRETGAAKAAGLGAELRQLGGVLGILQDDPEAY--- 421
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK L++ D+ LI++R AR K+++++D+IR +L GI L D + T
Sbjct: 422 ---LKGGVGAEGGLSDADIDALIQQRLDARAEKNWAEADRIRDELQAAGILLEDGPQGTS 478
Query: 419 WR 420
WR
Sbjct: 479 WR 480
>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|226710842|sp|B5EEK6.1|SYC_GEOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 480
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/427 (42%), Positives = 245/427 (57%), Gaps = 30/427 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G +S R+ +E+ DMA L PT+QP+ ++H+ +I ++ +I+
Sbjct: 74 KIINRANRDGVPYNEISERFIKEFDNDMARLMLQLPTFQPKATEHIPEIIALVQTLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY DVF+ V++ Y +LS + LE+ +AG R+ VD RK +P DFALWK AK GEP
Sbjct: 134 FAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDERKEHPMDFALWKGAKPGEPY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIAQS AA V Y
Sbjct: 194 WESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPHHENEIAQSEAASGKPFVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N+EKMSKSLGNFFTI++I E Y LR FL+SAHYRSP+++S L A
Sbjct: 254 WLHNGFVNINSEKMSKSLGNFFTIKEILESYDAEVLRFFLLSAHYRSPIDFSDQNLKEAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC------INKLRDEFHARMSDDLNT 295
+ IY+ AL+ E + PA D + F M DD NT
Sbjct: 314 LGLERIYK-------ALAGIYERLASGANTPAGADNAEFVEKVAGFAGRFGDAMDDDFNT 366
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PG 353
+ L G D ++ IN L L+E + EV ++ +LG+ P
Sbjct: 367 ALAL-GHLFDLVRVINREL--------PTASTGLLEQAKA---EVAKMAAVLGICDSVPA 414
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
A+ LQ++KD+ E++ E++ LI ERA ARK K+F + D+IR L K I L+D
Sbjct: 415 AF---LQRMKDRKTSDIEMSAEEIEALIAERAEARKAKNFKRGDEIRDLLLEKNIVLLDS 471
Query: 414 GKETIWR 420
+ T W+
Sbjct: 472 AQGTTWK 478
>gi|284048089|ref|YP_003398428.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952310|gb|ADB47113.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 481
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 186/427 (43%), Positives = 250/427 (58%), Gaps = 29/427 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR AN+ G ++NRY + Y M L PRVS+H+ I + ++INN
Sbjct: 74 KIIRAANEEGVTWDVIANRYIKAYFEVMDKLHVKRAHIYPRVSEHIPDIIHTVQELINNG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
YVV+GDV++ VE+ +YG LSG++L++ AG RV VD RK NP DFALWK+AK GEPS
Sbjct: 134 YGYVVDGDVYYRVERFSHYGELSGRKLDDMMAGARVDVDERKENPMDFALWKSAKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ-DSNVS 180
WDSPWG GRPGWHIECS MS YL + D HGGG DLIFPHHENEIAQS A V
Sbjct: 194 WDSPWGKGRPGWHIECSTMSTKYLGNTLDFHGGGSDLIFPHHENEIAQSEGATGVHPFVR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG +T N EKMSKSLGNF T+ + + Y P +R+F+++ HYRSPL++S +L A
Sbjct: 254 YWVHNGFITINEEKMSKSLGNFKTVYDLLKEYEPETIRYFILNTHYRSPLDFSQERLAEA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-----DCINKLRDEFHARMSDDLNT 295
++L+ A + QE + + P AE D + +LR F MSDD NT
Sbjct: 314 G-------RSLERLRTAQNNLQEIQQVITVGPDAESLALRDKVEELRKGFFDAMSDDFNT 366
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PG 353
S ++ F A K IN N + K+ L+E +I+ KE++ ++G+L P
Sbjct: 367 SLAISYLFALA-KEINVYHNAIISG-AKKPDGKLVE---QIDKAWKEMIGVIGILENQPA 421
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
A E ++A ++ IEER AARK +DF+K+D IR +L KGI L D
Sbjct: 422 ANGEGGAVSNEEA---------EIAARIEERQAARKARDFAKADAIRDELAAKGIILEDT 472
Query: 414 GKETIWR 420
+ W+
Sbjct: 473 PQGVRWK 479
>gi|312794405|ref|YP_004027328.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181545|gb|ADQ41715.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 465
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 173/417 (41%), Positives = 246/417 (58%), Gaps = 30/417 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ R+ +EY D L T PR ++ +E + +I ++I+
Sbjct: 72 KMINRANKEGITVFELAKRFIEEYYKDADRLNVKRATKNPRATEEIEDMIALIQRLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFALWKA K GEP+
Sbjct: 132 YAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFALWKAKKEGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS AA +
Sbjct: 192 WSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQSEAATGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG+V+ NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PLN+S+ ++ A
Sbjct: 252 WLHNGYVSINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNFSIDLIEQAE 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ IY ++ E + Q ++ + + I L+ +F M DDLNT+ TG
Sbjct: 312 VALKRIYTCYENLEFLI---QNAASSSENDDKLKAAIEDLKAKFIEAMEDDLNTAEA-TG 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP-GAYSEVLQ 360
+ ++ IN+ N K E+L +++ +KE+ ILG+L GA E +
Sbjct: 368 YLFEMVREINTHANSCSK-----------ETLTFVKDTLKELCSILGILEQYGAKEEAIP 416
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q ++L+L+E+R ARK K+F+++D+IR +L G ++D + T
Sbjct: 417 Q--------------EILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGT 459
>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
gi|109894904|sp|Q2SK40.1|SYC_HAHCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
Length = 467
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 182/420 (43%), Positives = 254/420 (60%), Gaps = 28/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+ RA D GE+ +L+ R+ D L L PT +PR + H+++I MI ++++
Sbjct: 73 KILNRARDNGESVDALTARFIDAMHEDERALGVLSPTSEPRATGHIDEIIAMIQRLMDKG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+++VE+ +YG+LS Q+L+ RAG R+ VD+ KR+PADF LWKAAK GE
Sbjct: 133 YAYHASNGDVYYSVEQFADYGKLSKQKLDEIRAGARIEVDAEKRSPADFVLWKAAKPGEL 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA V+
Sbjct: 193 SWDSPWGEGRPGWHIECSAMSTRCLGDTFDIHGGGPDLKFPHHENEIAQSEAATGCKYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V N EKMSKSLGNFFTIR+I ++Y +R+FL S+HYRS ++YS + L+ A
Sbjct: 253 YWMHAGAVRVNKEKMSKSLGNFFTIREILDKYPAEVVRYFLASSHYRSAIDYSDVALEEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y ++++ + E G + P + + R+ FH M DD NTS +
Sbjct: 313 RSGLERLYNSIREL------YGELGAVSMDEP----LVGEYRERFHQAMDDDFNTSSAVA 362
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D K +N + KK+ + + LSL + + ++ +LGLL A E L
Sbjct: 363 VLF-DMAKAVN-----VAKKEDRTRALSLAKGM-------VDLAEVLGLLQ--ADPESLM 407
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q + + + L+ ++ I +R AAR NKDF++SD+IR L KG+ L D + T W+
Sbjct: 408 QGEGEEV--GGLSVAEIEDFIAQRNAARANKDFAESDRIRDLLKEKGVLLNDSREGTSWQ 465
>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259511844|sp|C5A739.1|SYC_THEGJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
Length = 476
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 177/419 (42%), Positives = 245/419 (58%), Gaps = 20/419 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+P L+ ++ + +L DM L+ P PRV++HM+ I I ++
Sbjct: 74 KIIKRANETGEDPKELAEKFLRIFLEDMKALKVKPADIYPRVTEHMQDIISFIKKLQEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V K +YG+LS +LE+ G RV KRNP DFALWK AK GEP
Sbjct: 134 YAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPEDFALWKKAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 194 WESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVHY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + N EKMSKSLGNF T+R++ +RY+P +R F++ HYRSPL+YS ++ A
Sbjct: 254 WMHTGFLMVNGEKMSKSLGNFVTVRELLKRYNPEVIRLFVLQRHYRSPLDYSEEGIEHAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ VA+S + + A + I R +F+ M DD NT+ L
Sbjct: 314 NNLERLYNTLENIRVAMSKAEISFRWDEPEFRAYEAIRDARKKFYEAMDDDFNTAEALKA 373
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ + IN L ++K PK+ LRK K+V + GL + + ++
Sbjct: 374 VFEVS-NAINRYLTEVEK--PKES------ILRKAWEFFKDVGEVFGL-----FEDYFKE 419
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
++AE EE + L+E RA RK K F +D+IR +L + GI L D + T+W+
Sbjct: 420 ------QKAENDEELINLLVEVRAQLRKEKKFDLADKIREELRKLGIQLEDTPQGTVWK 472
>gi|53805250|ref|YP_113028.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|61216155|sp|Q60BG8.1|SYC_METCA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53759011|gb|AAU93302.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 465
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 190/422 (45%), Positives = 243/422 (57%), Gaps = 34/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE +L+ R+ + D L LPP ++PR ++ ++ I MI +I
Sbjct: 73 KIIRRAVENGETIGALTARFIEAMHEDERALGVLPPDHEPRATESIDDILAMIGTLIERG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDVF+AV PNYGRLSG+ L+ RAGER+ VD KR+P DF LWK+AK GEP
Sbjct: 133 HAYVGSNGDVFYAVASFPNYGRLSGKNLDELRAGERIEVDEAKRDPLDFVLWKSAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWGPGRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 193 FWASPWGPGRPGWHIECSAMSTRCLGAHFDIHGGGMDLQFPHHENEIAQSEGATGEHFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N EKMSKSLGNFFT+R+I RY P +R F++++HYRSPLNYS LD A
Sbjct: 253 YWMHNGFVRINEEKMSKSLGNFFTVREILARYRPEVVRFFILNSHYRSPLNYSDENLDEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ A+ +Y L+ L P P ED F M DD NT +
Sbjct: 313 AAALSRLYTALRGLAPDL-PL----------PLGEDRDEGFSSRFADAMQDDFNTPEAIA 361
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F D + IN K + +L +L+ + N +LGLL P AY
Sbjct: 362 VLF-DLAREINR-----HKAAEPAKAAALGATLKSLGN-------VLGLLQTDPEAY--- 405
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K A + L++ D+ I R ARK K++++SD+IR +L +GI L D T
Sbjct: 406 ---FKSDA-GGSGLSDADIETRIRARLEARKAKNWAESDRIRDELKAQGIILEDSAAGTT 461
Query: 419 WR 420
WR
Sbjct: 462 WR 463
>gi|338813808|ref|ZP_08625892.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
gi|337274202|gb|EGO62755.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
Length = 480
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 177/421 (42%), Positives = 250/421 (59%), Gaps = 18/421 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II AN + ++NRY Y M L+ T PRVS+HM QI DM+ +IN
Sbjct: 74 KIINAANAEQVSWDVIANRYIASYFEVMDPLRIRRATVYPRVSEHMPQIIDMVQTLINKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY+ +GDV+++VEK +YG+LSG+ L++ +AG RV VD RKR+P DFALWK+ K GEPS
Sbjct: 134 YAYLADGDVYYSVEKFHDYGKLSGRSLDDMKAGARVEVDERKRHPMDFALWKSVKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA--ACQDSNV 179
WDSPWGPGRPGWHIECSAMS HYL FD HGGG DLIFPHHENEIAQS A C++ V
Sbjct: 194 WDSPWGPGRPGWHIECSAMSFHYLGKSFDFHGGGSDLIFPHHENEIAQSEAFCGCEEPCV 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N EKMSKSLGNFF ++ I + P LR F++S HYRSPL++S +L
Sbjct: 254 HYWLHNGFITVNEEKMSKSLGNFFLVKDILTHFSPEVLRFFIVSTHYRSPLDFSDERLAE 313
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A ++ + +T Q+ L+ G + + + + + EF+ M DD NT+ +
Sbjct: 314 AGRSLERL-KTAQENLKYLATLPA-GAASEGSHTLTEAAQRAKTEFYEAMDDDFNTALVT 371
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F + +N+ + + S +++ ++ E +K + LG VL
Sbjct: 372 SVMFG-----LAKEINIYHHEVVNGRVGSDLQACKEAEQALKVMADTLG---------VL 417
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q+ ++ + EL E+ + +I R AR+ KD++ +DQIR L GI L D + W
Sbjct: 418 QENSARSDENQELVEQLMQLIITIRQEARQKKDWATADQIRDRLHDAGIVLEDSPQGARW 477
Query: 420 R 420
+
Sbjct: 478 K 478
>gi|335043568|ref|ZP_08536595.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333790182|gb|EGL56064.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 463
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 179/423 (42%), Positives = 256/423 (60%), Gaps = 38/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ +L+ RY E D L L P +P+ ++ M +I MI +I+
Sbjct: 73 KIIKRAAENGESIQALTERYIDEMHKDADALGVLRPDIEPKATESMTEILAMIETLISKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++ V + YG+LSG+ +E+ RAGER+AV+ K +P DF LWKAAKAGEP
Sbjct: 133 LAYKADNGDVYYDVSQFNGYGKLSGRNIEDLRAGERIAVNEAKTDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAMSAH L +FDIHGGG DL FPHHENEIAQS A +V+
Sbjct: 193 AWESPWGEGRPGWHIECSAMSAHCLGEQFDIHGGGQDLQFPHHENEIAQSEGAHGCQSVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V ++EKMSKSLGNFFT+R++ E+Y A+R+F++S+HYRSPLNY+ QL+ A
Sbjct: 253 YWMHNGFVRIDDEKMSKSLGNFFTVREVLEQYPAEAIRYFILSSHYRSPLNYAEDQLEQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y TL++ + T ++N ++ + F A M DD NT+ L+
Sbjct: 313 KAALTRFYTTLREVDT----------TQKVNWQDDE---EFGGRFKAAMDDDFNTALALS 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
D + IN + ++Q + + ++ + L + +LGL Q
Sbjct: 360 -VMADVRQAINKA-----REQAQSEAVAYLAGL------LSSFGDVLGL---------FQ 398
Query: 361 QLKDKALKRAELTEE---DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q DK L +++ D+ L+ ER AR +K+++++D+IR LT GI L D +T
Sbjct: 399 QDADKFLTGDSSSDQLAVDIDSLVAERNQARADKNWARADEIRDQLTEMGIVLEDAAGKT 458
Query: 418 IWR 420
WR
Sbjct: 459 SWR 461
>gi|30248074|ref|NP_840144.1| cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
gi|61216300|sp|Q82Y45.1|SYC_NITEU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30179959|emb|CAD83954.1| Cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
Length = 465
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/427 (42%), Positives = 247/427 (57%), Gaps = 44/427 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E +L+ RY Q D L + P+++PR +++++ + MI ++N +
Sbjct: 73 KIIRRALENHEPFSALTARYIQAMEEDAMALGVISPSFEPRATEYVDSMIAMIESLLNRE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDVF+ V + P YG+LSG+ L++ RAGERV +D+ KR+P DF LWKAAK EP
Sbjct: 133 LAYVASNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDTNKRDPLDFVLWKAAKPDEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAMS HYL +FDIHGGG DL FPHHENEIAQS S+V+
Sbjct: 193 SWDSPWGKGRPGWHIECSAMSEHYLGDQFDIHGGGQDLQFPHHENEIAQSEGVHGHSHVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V +NEKMSKSLGNFFT+R++ RY P +R F++ AHYRSPLNYS L+ A
Sbjct: 253 YWMHNGFVRVDNEKMSKSLGNFFTVREVLTRYQPEVVRFFIVRAHYRSPLNYSDAHLNDA 312
Query: 241 SDAVFYIYQTL------QDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLN 294
A+ +Y L QD EVA TA I+ E+ + R F + M+DD N
Sbjct: 313 RSALERLYTVLKNHAPSQDSEVA---------TAVID--WENNVYARR--FMSAMNDDFN 359
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL-GLLPPG 353
T + F A E+ R ++ +L+ L G+L
Sbjct: 360 TPEAVAVLFDLA-----------------------SEANRTGDSHYASLLKALGGVLGLL 396
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
L+ + + E++ +I++R ARK ++F+++D +R L GI L D
Sbjct: 397 QQPPQQYLQYPAHLQDGQYSVEEIENMIQQRLQARKERNFAQADTLRQQLAEAGIILEDS 456
Query: 414 GKETIWR 420
+ T WR
Sbjct: 457 PQGTTWR 463
>gi|344340320|ref|ZP_08771246.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
gi|343799978|gb|EGV17926.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
Length = 466
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/426 (43%), Positives = 247/426 (57%), Gaps = 42/426 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ +L++R+ Q D L LPPT +PR + HM++I MI +I
Sbjct: 73 KIIRRAAEAGESMQALTDRFIQAMHEDSDALGILPPTDEPRATAHMDEILAMIGTLIEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV++AV + YG+LSG+ ++ RAG RV VD KR+P DFALWK+AK GEP
Sbjct: 133 LAYVAENGDVYYAVARFAGYGKLSGKDPQDLRAGARVEVDEAKRDPLDFALWKSAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A ++ V+
Sbjct: 193 AWDSPWGPGRPGWHIECSAMSTCALGHHFDIHGGGADLQFPHHENEIAQSEGATGETFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V N EKMSKSLGNFFT+R+I +R+ P +R+F++++ YRSPLNY L+ A
Sbjct: 253 VWMHNGFVRVNEEKMSKSLGNFFTVREILQRFRPEEVRYFILTSQYRSPLNYDDEHLEQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED--CINKLRDEFHARMSDDLNTSHI 298
A+ +Y L+ + P A D + FHA M DD NT
Sbjct: 313 RAALTRLYTALR-------------GVPDVAPDAVDASVAAPFVERFHAAMDDDFNTPEA 359
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L F D ++ +N + LR++ ILG +
Sbjct: 360 LAVLF-DLVREVNRI-----RADDPGAAAGPAAVLRRLGG-------ILG---------I 397
Query: 359 LQQLKDKALK-RAE---LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
LQ+ D L+ RA+ L++ ++ L++ R AAR KD++++D++R LT GI L D
Sbjct: 398 LQEDPDLYLRGRADDGGLSDTEIESLVQARIAARAAKDWAEADRLRKLLTEAGIGLEDGP 457
Query: 415 KETIWR 420
T WR
Sbjct: 458 SGTAWR 463
>gi|444913172|ref|ZP_21233326.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
gi|444716175|gb|ELW57030.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
Length = 488
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/422 (42%), Positives = 250/422 (59%), Gaps = 18/422 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A + GE P++L+ R+ + + D L L P P+VSDH+ +I +I ++++
Sbjct: 77 KIIKAAQETGEAPVALAARFVEAFREDARALHLLEPDVSPKVSDHIPEILRIIGKLVDKG 136
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+V + P+Y +LS + L+ GERV +K P DFALWKAAK GEPS
Sbjct: 137 VAYASQGDVYFSVRRYPDYAKLSKRDLDELCVGERVQPGEQKHEPLDFALWKAAKPGEPS 196
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMS YL FDIHGGG+DLIFPHHENE+AQS AA + Y
Sbjct: 197 WDSPWGPGRPGWHIECSAMSERYLGETFDIHGGGLDLIFPHHENELAQSEAASGHTLARY 256
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + KMSKSLGN +R+ ER ALR F +S HYR PL +S L A
Sbjct: 257 WMHCGFLDLEGAKMSKSLGNVVRLREALERVDAEALRFFFLSTHYRHPLAFSDKGLADAE 316
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS---HI 298
+ Y Y+TL+ + + GK P D + D F A+M DD N++ +
Sbjct: 317 LRMEYFYETLRKVDERVG-----GKEFAPGPLHGDAARFMAD-FEAQMDDDFNSAGALGV 370
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L+G F + +N L K P + + + +LR + +V++V ILGL S +
Sbjct: 371 LSGLF--------AMMNELVDKPPVKDKAVVGRTLRALREDVRKVSGILGLFEEAPASWL 422
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L++ +D+A+K L V QL+ RA ARK KDF+++D++R +L G+ +MD T+
Sbjct: 423 LRR-RDRAVKERGLDVARVEQLMAARAEARKAKDFAEADRLRVELKSLGVEIMDTAAGTL 481
Query: 419 WR 420
W+
Sbjct: 482 WK 483
>gi|386826602|ref|ZP_10113709.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
gi|386427486|gb|EIJ41314.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
Length = 464
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/427 (42%), Positives = 248/427 (58%), Gaps = 46/427 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ SL+ R+ Q D L L P +PR + +++ I D+IT+++
Sbjct: 73 KIINRANENGEDIYSLTERFIQAMYEDADALGVLRPDQEPRATQYIDHIIDLITRLMKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV K YG+LSG+R+E+ RAGERV ++ K++P DF LWKAAK EP
Sbjct: 133 YAYTANNGDVYYAVGKFAEYGKLSGKRIEDLRAGERVDIEEAKQDPLDFVLWKAAKPNEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS H L + FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 193 SWASPWGNGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFPHHENEIAQSEGATGEQFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V N EKMSKSLGNFFT+R + +++ +R+F++++HYRSPLNY QLD+A
Sbjct: 253 VWMHNGFVRVNEEKMSKSLGNFFTLRDVLQKFPAEVIRYFILNSHYRSPLNYGDQQLDAA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ E +P ++ ++ F M+DD NT+ +
Sbjct: 313 QQALTRLYTALRGLEDTGAPLDKN--------------SEFYQRFATAMNDDFNTAEAIA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQ-----QQLSLIESLRKIENEVKEVLRILGLL--PPG 353
F ++ +N L+ Q QQL L+ ILG+L P
Sbjct: 359 VLFD-----LSREVNRLRVDNSSQAVAVAQQLKLLGG-------------ILGILQADPE 400
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
A+ K + L+ + V +LI ER AARK K++++SD+IR L +GI L D
Sbjct: 401 AW------FKRENTSTNGLSNDAVEKLIAERQAARKAKNWAESDRIRDMLKEQGIILEDA 454
Query: 414 GKETIWR 420
T WR
Sbjct: 455 AGVTTWR 461
>gi|381196562|ref|ZP_09903904.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii WJ10621]
Length = 473
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/422 (42%), Positives = 259/422 (61%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ L++R+ Q D +L CL P PR +D+++Q++ MI ++
Sbjct: 75 KIIKRANENGESITQLTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQSMIGNLVEKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 TAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + +++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + + + Q +G T +++ E L + F++ M DD NT+
Sbjct: 315 EAKTALSRFYHSFKAYQ------QAYGDT-QVDTLDE----TLLERFNSAMRDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K+Q +Q +LR + N ILGL+ +
Sbjct: 364 IAVLFE-----VNKELNRAVKEQQTEQAAIYYATLRHLTN-------ILGLVQHNVEEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L+EE + LI++R A+K K+F+K+D+IR L +G+ L D + TI
Sbjct: 412 KSDIGQEALA---LSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVVLEDTRQGTI 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|262369707|ref|ZP_06063035.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262315775|gb|EEY96814.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 473
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/422 (42%), Positives = 259/422 (61%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ L++R+ Q D +L CL P PR +D+++Q++ MI ++
Sbjct: 75 KIIKRANENGESITQLTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQSMIGNLVEKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 TAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKDN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + +++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + + + Q +G T +++ E L + F++ M DD NT+
Sbjct: 315 EAKTALSRFYHSFKAYQ------QAYGDT-QVDTLDE----TLLERFNSAMRDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K+Q +Q +LR + N ILGL+ +
Sbjct: 364 IAVLFE-----VNKELNRAVKEQQAEQAAIYYATLRHLTN-------ILGLVQHNVEEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L+EE + LI++R A+K K+F+K+D+IR L +G+ L D + TI
Sbjct: 412 KSDIGQEALA---LSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVVLEDTRQGTI 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|312126760|ref|YP_003991634.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311776779|gb|ADQ06265.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 465
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 245/416 (58%), Gaps = 28/416 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ R+ QEY D L T PR ++ +E + +I ++I+
Sbjct: 72 KMINRANKEGITVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDMIALIQRLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFALWKA K GEP+
Sbjct: 132 YAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFALWKAKKEGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS AA +
Sbjct: 192 WSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQSEAATGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PLN+S+ ++ A
Sbjct: 252 WLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNFSIDLIEQAE 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ IY ++ E + Q ++ + + I L+ +F M DDLNT+ TG
Sbjct: 312 VALKRIYTCYENLEFLI---QNAASSSENDDMLKAAIEDLKAKFIDAMEDDLNTAEA-TG 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
+ ++ IN+ N K E+L ++ +KE+ ILG+L YSE
Sbjct: 368 YLFEMVREINTYANSCSK-----------ETLTFAKDTLKELCSILGILE--QYSE---- 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ E +++L+L+++R ARK K+F+++D+IR +L G ++D + T
Sbjct: 411 -------KEEAIPQEILELVKKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGT 459
>gi|222530216|ref|YP_002574098.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|254765173|sp|B9MMM6.1|SYC_ANATD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|222457063|gb|ACM61325.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 465
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 243/416 (58%), Gaps = 28/416 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ R+ QEY D L T PR ++ +E + +I ++I+
Sbjct: 72 KMINRANKEGITVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDMIALIQRLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFALWKA K GEP+
Sbjct: 132 YAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFALWKAKKEGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS AA +
Sbjct: 192 WSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQSEAATGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PLN+S+ ++ A
Sbjct: 252 WLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNFSIDLIEQAE 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ IY ++ E + Q ++ + + I +L+ +F M DDLNT+ TG
Sbjct: 312 VALKRIYTCYENLEFLI---QNAASSSENDDKLKAAIEELKAKFIDAMEDDLNTAEA-TG 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
+ ++ IN+ N K E+L ++ +KE+ ILG+L + E
Sbjct: 368 YLFEMVREINTYANSCSK-----------ETLTFAKDTLKELCSILGILEQYSAKE---- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
E + +L+L+E+R ARK K+F+++D+IR +L G ++D + T
Sbjct: 413 ---------EAIPQQILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGT 459
>gi|14521604|ref|NP_127080.1| cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878786|sp|Q9UYV2.1|SYC_PYRAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|5458823|emb|CAB50310.1| cysS cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|380742214|tpe|CCE70848.1| TPA: cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 477
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 248/422 (58%), Gaps = 26/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+P L+ R+ + +L DM L+ P PRV++H++ I + I ++
Sbjct: 74 KIIKRAQETGEDPGKLAERFIKVFLEDMNALKVKPADIYPRVTEHIDDIIEFIKKLKEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V+K +YG+LSG ++E R G RV K+NP DFALWK AK GEP
Sbjct: 134 YAYEGSDGVYFEVQKFKDYGKLSGVKIEELRKGARVEPGEGKKNPEDFALWKKAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 194 WDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRSPL+Y+ L A
Sbjct: 254 WLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRLFVLQKHYRSPLDYTEEGLQHAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ +A+ + K + + A + I + R +F+ M DD NT+ L
Sbjct: 314 NNLERLYNTLENIRIAMRNAELSYKWSEKDFEAYEAIREARKKFYDAMDDDFNTAEALKA 373
Query: 302 AFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ +++++N +L+ +PK+ L + E +++ SEV
Sbjct: 374 VFE-----VSNAINKYILEVDKPKESIL----------RKALEFFKVV--------SEVF 410
Query: 360 QQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+D + + EE +++ L+E R RK K F +D+IR +L + GI L D G+ET+
Sbjct: 411 GIFEDYFKEEKKGEEEKLIELLVEVRKQLRKEKRFDLADKIREELRKLGIQLEDKGQETV 470
Query: 419 WR 420
W+
Sbjct: 471 WK 472
>gi|397651531|ref|YP_006492112.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
gi|30316338|sp|Q8U227.2|SYC_PYRFU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|393189122|gb|AFN03820.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
Length = 477
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 236/422 (55%), Gaps = 18/422 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+P L+ R+ + +L DM L+ P PRV+DH++ I + I ++
Sbjct: 73 KIIKRARETGEDPKELAERFIKIFLEDMEALKVKPADIYPRVTDHIDDIIEFIGKLKEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++F V+K P YG+LSG ++E+ + G RV K+NP DFALWK AK GEP
Sbjct: 133 YAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPGEGKKNPEDFALWKKAKPGEPK 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 193 WDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVKY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V EKMSKSLGNF TIR++ +RY P +R F++ HYRSPL Y+ L A
Sbjct: 253 WLHTGFVMVKGEKMSKSLGNFVTIRELLKRYEPEVIRFFVLQKHYRSPLEYTEEGLQHAK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ VAL + + + I + + +F+ M DD NT+ L
Sbjct: 313 NNLQRLYNTLENIRVALRNAEISYTWGELEFKTYEIIREGKRKFYEAMDDDFNTAEALKA 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A IN L K PK+ L KI +EV G + + ++
Sbjct: 373 VFEVA-NAINKYLTEANK--PKESILRKALEFFKIVSEV-----------FGVFEDYFRE 418
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
+ + +L E L+E R RK K + +D IR +L + GI L D G ET W+
Sbjct: 419 ETKEREESEKLIE----LLVEVRKQLRKEKRYELADMIREELKKLGIQLEDRGSETTWKR 474
Query: 422 CV 423
+
Sbjct: 475 II 476
>gi|332158896|ref|YP_004424175.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331034359|gb|AEC52171.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 476
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 243/421 (57%), Gaps = 24/421 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+P L+ ++ + +L DM L+ P PRV++H+ I D I ++
Sbjct: 74 KIIRRARETGEDPKELAEKFIKVFLEDMNALKVKPADIYPRVTEHIGDIIDFIKKLEEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY + V+F V+K YG+LSG ++E R G RV K+NP DFALWK AK GEP
Sbjct: 134 YAYEGKDGVYFEVQKFKEYGKLSGIKIEELRKGARVEPGEGKKNPEDFALWKKAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 194 WDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRSPL+YS L A
Sbjct: 254 WLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRSPLDYSEEGLQHAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ +A+ + + + I R +F+ M DD NT+ L
Sbjct: 314 NNLERLYNTLENIRIAMERAELAYTWDEDDYEVYEAIKNARKKFYEAMDDDFNTAEALKA 373
Query: 302 AFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ +++++N + +K++PK+ LRK K V I G+ Y +
Sbjct: 374 VFE-----VSNAINKYLTEKERPKEA------ILRKALEFFKVVSEIFGIFED--YFKEE 420
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
++ ++ L + L++ R+ RK K F +D+IR +L R GI L D G+ET+W
Sbjct: 421 KREIEEELIKV---------LVDVRSQLRKEKRFDLADKIREELRRLGIQLEDRGQETVW 471
Query: 420 R 420
+
Sbjct: 472 K 472
>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
Length = 483
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 236/422 (55%), Gaps = 18/422 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+P L+ R+ + +L DM L+ P PRV+DH++ I + I ++
Sbjct: 79 KIIKRARETGEDPKELAERFIKIFLEDMEALKVKPADIYPRVTDHIDDIIEFIGKLKEKG 138
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++F V+K P YG+LSG ++E+ + G RV K+NP DFALWK AK GEP
Sbjct: 139 YAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPGEGKKNPEDFALWKKAKPGEPK 198
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 199 WDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVKY 258
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V EKMSKSLGNF TIR++ +RY P +R F++ HYRSPL Y+ L A
Sbjct: 259 WLHTGFVMVKGEKMSKSLGNFVTIRELLKRYEPEVIRFFVLQKHYRSPLEYTEEGLQHAK 318
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ VAL + + + I + + +F+ M DD NT+ L
Sbjct: 319 NNLQRLYNTLENIRVALRNAEISYTWGELEFKTYEIIREGKRKFYEAMDDDFNTAEALKA 378
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A IN L K PK+ L KI +EV G + + ++
Sbjct: 379 VFEVA-NAINKYLTEANK--PKESILRKALEFFKIVSEV-----------FGVFEDYFRE 424
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
+ + +L E L+E R RK K + +D IR +L + GI L D G ET W+
Sbjct: 425 ETKEREESEKLIE----LLVEVRKQLRKEKRYELADMIREELKKLGIQLEDRGSETTWKR 480
Query: 422 CV 423
+
Sbjct: 481 II 482
>gi|301059000|ref|ZP_07199966.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
gi|300446881|gb|EFK10680.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
Length = 484
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 246/423 (58%), Gaps = 19/423 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA L + P L+ + + DM L L +PR +D++E + +M +++
Sbjct: 74 KIIERAKLLKKAPKELAREFIDAFYEDMGKLGVLKADVEPRATDYVEDMIEMTQTLMDRG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F+V+ P YG LSG+ LE+ RAG RVAVD RKR+P DF LWK+AK GEP
Sbjct: 134 YAYTEGGDVYFSVDSYPGYGSLSGRNLEDMRAGSRVAVDDRKRHPMDFVLWKSAKPGEPQ 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWGPGRPGWH+ECS MS +L FDIHGGG DL+FPHHENE AQS A Y
Sbjct: 194 WPSPWGPGRPGWHLECSVMSNRHLGPTFDIHGGGRDLLFPHHENERAQSMCANDGEFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT +EKMSKSLGNF TIR ++YHP LR FL+S HYRSPL++S + +
Sbjct: 254 WVHNGFVTVESEKMSKSLGNFLTIRDALKKYHPEVLRLFLLSKHYRSPLDFSAKDVANLQ 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTSH 297
+ IY+ LQ L P + KT +ED ++ EF+ + M DDLNT+
Sbjct: 314 SGLVRIYRMLQRLNDLLGP-GDGEKT------SEDSLSGASGEFYEKFCEMMDDDLNTAG 366
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L F D ++ +N ++ ++ LS ++S R +++ ILGL +E
Sbjct: 367 ALGLVF-DKVREMNRLMDPDGNGAVSEKALSSLKSQR---DQLLRAGEILGLFQQNP-AE 421
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+QL A ++ +++ L+++R+ AR KD++ SD IR L G+ L D + T
Sbjct: 422 FFEQL---ASPSKDVNTDEIEALVKKRSQARVAKDWALSDTIRDQLKEMGVVLEDGPQGT 478
Query: 418 IWR 420
WR
Sbjct: 479 TWR 481
>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
Length = 459
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 183/422 (43%), Positives = 239/422 (56%), Gaps = 42/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G P L + D A L LPPT++PR + H+ + MI Q+I N
Sbjct: 75 KIIKRALERGITPEQLVEETIADMRQDAAALGLLPPTHEPRATHHVGGMVAMIEQLIANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L+ RAGERV VD KR+P DF LWKAAK GEP
Sbjct: 135 KAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRDPLDFVLWKAAKPGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEIAQS A V+
Sbjct: 195 SWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPHHENEIAQSEGAHGHQYVN 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG + + EKMSKSLGNFFTIR + + + +R F++ +HYRSP+NY+ L+ A
Sbjct: 255 YWLHNGFINVDGEKMSKSLGNFFTIRDVLQHFDGEVIRFFIVRSHYRSPVNYTDSILNDA 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQE--HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ +Y L+ E+ S + H AR F A M DD TS
Sbjct: 315 KHGLTRLYTALRGIELPTSDGIDWNHAYAAR---------------FKAAMDDDFGTSEA 359
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ + +N K + P+ +L +K++ +LGLL EV
Sbjct: 360 VAVLFE-----LAGEVN--KSRDPQLARL------------LKDLGGVLGLLTRD--PEV 398
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + EL+ E V LI+ R AR KD+++SD+IR +LT KGI L D TI
Sbjct: 399 FLQ---GGVGEGELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLEDGAGGTI 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|386392194|ref|ZP_10076975.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
gi|385733072|gb|EIG53270.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
Length = 485
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 179/419 (42%), Positives = 238/419 (56%), Gaps = 9/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN G ++ RY + DM L L +PR ++++ ++ DM ++I N
Sbjct: 72 KIIKKANSEGATSAEIAERYIAAFYEDMDRLGILRADAEPRATEYIAEMADMAARLIENG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DFALWKA+K GEP
Sbjct: 132 HAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDFALWKASKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
WDSP+GPGRPGWH+ECS MS L DIHGGG DLIFPHHENEIAQS AA +
Sbjct: 192 VWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFPHHENEIAQSEAATGNDFCR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+W+HNG V N EKMSKSLGNF TIR I +RY P LR FL+S+HYRSPL+YS LD A
Sbjct: 252 FWVHNGFVRINTEKMSKSLGNFVTIRDIYKRYLPEVLRFFLVSSHYRSPLDYSDQALDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ IY E AL+ + R+ P + KL + F A M DDLNT+ +
Sbjct: 312 EKGIKRIYAAKGQMEQALA--RAKWSETRLPPEIGQELAKLEEGFTAAMDDDLNTAQAIG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + + +L K + + E+LR+I ++ ILG+ + E L
Sbjct: 370 HVF----GLVRLAGRVLDDKTLAKSR-EAAEALRRILADLDTWSGILGVFGRDS-REFLA 423
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+LK L R + V L+ ER ARK KDF++SD IR +L G+ +MD W
Sbjct: 424 ELKASRLARLGIDAVRVDGLVAERQEARKTKDFARSDAIRDELAGLGVTVMDTPAGPQW 482
>gi|146295747|ref|YP_001179518.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|187629798|sp|A4XHE2.1|SYC_CALS8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145409323|gb|ABP66327.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 465
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 244/416 (58%), Gaps = 28/416 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ R+ QEY D L T PR ++ +E + +I ++I+
Sbjct: 72 KMINRANKEGITVFELAERFIQEYYKDADRLNVRRATKSPRATEEIEDMIALIQRLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F K YG+LS + +E+ AG RV +K +P DFALWKA K GEP+
Sbjct: 132 YAYVVDGDVYFRTRKFAEYGKLSHKNIEDLMAGARVDPSEKKEDPLDFALWKAKKEGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS AA +
Sbjct: 192 WNSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQSEAATGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PLN+S+ ++ A
Sbjct: 252 WLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNFSIDLIEQAE 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ IY ++ E + Q ++ + + I +L+ +F M DDLNT+ TG
Sbjct: 312 VALKRIYTCYENLEFLI---QNAASSSENDDKLKAAIEELKAKFIDAMEDDLNTAEA-TG 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
+ ++ IN+ N K E+L ++ +KE+ ILG+L + E
Sbjct: 368 YLFEMVREINTHANSCSK-----------ETLTFAKDILKELCSILGILEQYSAKE---- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
E +++L+L+E+R ARK K+F ++D+IR +L G ++D + T
Sbjct: 413 ---------EAIPQEILELVEKRNQARKAKNFLEADRIRDELKSLGYIVLDTPQGT 459
>gi|327399102|ref|YP_004339971.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
gi|327181731|gb|AEA33912.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
Length = 474
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 248/421 (58%), Gaps = 24/421 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ G + ++ RY EY DM L P +P+ ++H+ +I +++ ++ +
Sbjct: 73 KIINRANEEGVSCNEIAQRYIGEYYKDMYRLNIAKPEVEPKATEHINEIIELVRKLQDMG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV++ VEK +YG+LSG+ ++ ++G RV ++ +K NP DFALWK +K EP
Sbjct: 133 YAYEVNGDVYYRVEKFKDYGKLSGKNIDELKSGARVEINDKKENPLDFALWKRSKENEPK 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS AA Y
Sbjct: 193 WKSPWGEGRPGWHIECSAMSMKYLGESFDIHGGGEDLIFPHHENEIAQSEAATGKPFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTI+ I ++Y LR+FL+ HYRSP+++S LD+A
Sbjct: 253 WIHNGFVRINKEKMSKSLGNFFTIKDILKKYDGQTLRYFLLLTHYRSPIDFSFEGLDAAK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+A+ Y +Q E + F+++GK ++ E + L F M +D N +
Sbjct: 313 EALNRYYNFIQRLED--TEFEKNGK---VDELLEKRLKDLLARFEEAMDEDFNAPKAIGE 367
Query: 302 AFQDALKFINSSLNMLKK--KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F +K N L+ + + K K + + +ES+ KI++ +LG+ + S +
Sbjct: 368 VFS-VIKTFNQYLDSITEGDKPKKAYKETFLESMNKIKS-------VLGVFDTSSASWFI 419
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ D + EE + Q RA ARKNKD+ +D+IR +L KGI L D + T W
Sbjct: 420 PEGID-----VDWVEERIKQ----RALARKNKDYETADKIRDELNGKGIILEDAKEYTRW 470
Query: 420 R 420
+
Sbjct: 471 K 471
>gi|61216275|sp|Q7NX82.2|SYC_CHRVO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 457
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/422 (43%), Positives = 239/422 (56%), Gaps = 42/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G P L + D A L LPPT++PR + H+ + MI Q+I N
Sbjct: 73 KIIKRALERGITPEQLVEETIADMRQDAAALGLLPPTHEPRATHHVGGMVAMIEQLIANG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L+ RAGERV VD KR+P DF LWKAAK GEP
Sbjct: 133 KAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEIAQS A V+
Sbjct: 193 SWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPHHENEIAQSEGAHGHQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG + + EKMSKSLGNFFTIR + + + +R F++ +HYRSP+NY+ L+ A
Sbjct: 253 YWLHNGFINVDGEKMSKSLGNFFTIRDVLQHFDGEVIRFFIVRSHYRSPVNYTDSILNDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQE--HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ +Y L+ E+ S + H AR F A M DD TS
Sbjct: 313 KHGLTRLYTALRGIELPTSDGIDWNHAYAAR---------------FKAAMDDDFGTSEA 357
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ + +N K + P+ +L +K++ +LGLL EV
Sbjct: 358 VAVLFE-----LAGEVN--KSRDPQLARL------------LKDLGGVLGLLTRD--PEV 396
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + EL+ E V LI+ R AR KD+++SD+IR +LT KGI L D TI
Sbjct: 397 FLQ---GGVGEGELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLEDGAGGTI 453
Query: 419 WR 420
WR
Sbjct: 454 WR 455
>gi|91774855|ref|YP_544611.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|122985612|sp|Q1H417.1|SYC_METFK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91708842|gb|ABE48770.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
Length = 455
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/423 (44%), Positives = 247/423 (58%), Gaps = 46/423 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE +L++R+ D A L P +PR +D++ ++ MI +I
Sbjct: 73 KIIARANENGETINALTDRFIAAMNEDAARLGVWRPDLEPRATDYIHEMIAMIVALIEKH 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++AV +YG+LSG+ LE+ RAGERV VD+ KR+P DF LWKAAK GEP
Sbjct: 133 HAYAADNGDVYYAVSSFASYGKLSGKSLEDLRAGERVEVDAHKRDPMDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWGPGRPGWHIECSAM A +L FDIHGGG DL FPHHENEIAQS A + V+
Sbjct: 193 SWDSPWGPGRPGWHIECSAMGARHLGPHFDIHGGGQDLQFPHHENEIAQSEGAHGCTFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG + ++EKMSKSLGNFFTIR++ E+Y +R F++ AHYRSPLNYS LD A
Sbjct: 253 YWMHNGFIRVDDEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSPLNYSSHHLDDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y TL+ E+ P AE F + DD NT
Sbjct: 313 KQALTRLYNTLRGRELPQLDIDWR------QPEAE--------RFKQALDDDFNTPEAFA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + S N + Q +L+++L LGL LQ
Sbjct: 359 VLFE-----LASEAN----RTGSAVQAALLKALAG----------QLGL---------LQ 390
Query: 361 QLKDKALKR---AELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ D+ LK A L+ +++ +LI ER AARK K+F+++D+IR LT +GI L D + T
Sbjct: 391 RDPDEFLKGEAVAGLSPDEIERLIAERLAARKCKNFAEADRIRDALTAQGIILEDTPQGT 450
Query: 418 IWR 420
WR
Sbjct: 451 SWR 453
>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|6831682|sp|O58370.1|SYC_PYRHO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 476
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 243/421 (57%), Gaps = 24/421 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+P L+ ++ + +L DM L+ P PRV++H+E I I ++
Sbjct: 74 KIIRRAKETGEDPAKLAEKFIKVFLEDMKALKVKPADIYPRVTEHIEDIIQFIERLKEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V+K YG+LSG +LE R G RV K+NP DFALWK AK GEP
Sbjct: 134 YAYEGSDGVYFEVQKFKEYGKLSGVKLEELRKGARVEPGEGKKNPEDFALWKKAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 194 WESPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVHY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRSPL+YS L A
Sbjct: 254 WLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRSPLDYSEEGLQHAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ +A+ + + A + I + R +F+ M DD NT+ L
Sbjct: 314 NNLERLYNTLENIRIAMENAELAYTWDENDFKAYNSIKEARRKFYEAMDDDFNTAEALKA 373
Query: 302 AFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ +++++N + + ++PK+ LRK + V I G+
Sbjct: 374 VFE-----VSNAINKYITEAEKPKES------VLRKAWEFFRTVGEIFGIF--------- 413
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ ++A+ E+ + LI+ RA RK + F +D+IR +L + GI L D GKETIW
Sbjct: 414 --EEYFKEEKAKEEEKLIELLIQVRAELRKERKFELADKIREELRKLGIQLEDKGKETIW 471
Query: 420 R 420
+
Sbjct: 472 K 472
>gi|344995511|ref|YP_004797854.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963730|gb|AEM72877.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 465
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/417 (41%), Positives = 243/417 (58%), Gaps = 30/417 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ R+ +EY D L T PR ++ +E + +I ++I+
Sbjct: 72 KMINRANKEGITVFELARRFIEEYYKDADRLNVKRATKNPRATEEIEDMIALIQRLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F K YG+LS + +E AG RV + +K +P DF LWKA K GEP+
Sbjct: 132 YAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFVLWKAKKEGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS AA +
Sbjct: 192 WSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQSEAATGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PLN+S+ ++ A
Sbjct: 252 WLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNFSIDLIEQAE 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ IY ++ E + Q ++ + + I L+ +F M DDLNT+ TG
Sbjct: 312 VALKRIYTCYENLEFLI---QNAASSSESDDKLKAAIEDLKAKFIEAMEDDLNTAEA-TG 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP-GAYSEVLQ 360
+ ++ IN+ N K E+L ++ +KE+ ILG+L GA E +
Sbjct: 368 YLFEMVREINTHANSCSK-----------EALTFAKDTLKELCGILGILEQYGAKEEAIP 416
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q ++L+L+E+R ARK K+F+++D+IR +L G ++D + T
Sbjct: 417 Q--------------EILELVEKRNQARKVKNFAEADRIRDELKSLGYIVLDTPQGT 459
>gi|269792622|ref|YP_003317526.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100257|gb|ACZ19244.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 468
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/422 (42%), Positives = 244/422 (57%), Gaps = 34/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RA ++G L++R+ + Y D L T P+ ++ + I ++I +I
Sbjct: 74 KMIKRAQEMGITVKELADRFIEAYYQDADALGIRRATVNPKATEEIPHIIELIELLIQKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F V P YG+L Q LE ++G RV VD RKR+P DFALWKA K GEP+
Sbjct: 134 HAYQIDGDVYFDVMSYPPYGKLIKQDLEELQSGARVEVDPRKRHPLDFALWKAQKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAM H+L D HGGG DL+FPHHENEIAQS AA V Y
Sbjct: 194 WDSPWGPGRPGWHIECSAMCRHHLGDTIDFHGGGCDLVFPHHENEIAQSEAATGKPFVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ + EKMSKSLGNF T R + +R+ PL +R F++SAHYRSP+N+S L A
Sbjct: 254 WVHNGYLMIDKEKMSKSLGNFMTARDLMKRFPPLVIRLFMLSAHYRSPINFSEENLRQAQ 313
Query: 242 DAVFYIYQTLQDCEVALS---PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ + AL P + R + I + RD+FH M DDLNT+
Sbjct: 314 AALERLRNGWAQIRFALDNPPPSTSESRELR------EQIARYRDDFHRAMDDDLNTAEA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L GA ++ NS L+ + P + +L + N +++V RI+G++
Sbjct: 368 L-GAVFSLIRATNSHLS--RGDSPD------LAALEEASNFLRDVDRIMGVI-------- 410
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ + L R DV LIEER AARK +DF+K+D IR L+ GI L D + T
Sbjct: 411 --GIDEDQLDR------DVEALIEERNAARKARDFAKADAIRDRLSSMGIVLEDTPQGTR 462
Query: 419 WR 420
W+
Sbjct: 463 WK 464
>gi|357406814|ref|YP_004918738.1| cysteinyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
gi|351719479|emb|CCE25155.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Methylomicrobium
alcaliphilum 20Z]
Length = 462
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/421 (42%), Positives = 248/421 (58%), Gaps = 35/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA D GE+ SL+ R+ + D L LPP +P+ + + +I MI ++I N
Sbjct: 73 KIIQRARDNGEDFQSLTERFIEAMHEDERALSVLPPDIEPKATQSIPEILAMIEKLIANG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDVF++V K NYGRLSG+ L +AGERV ++ K++P DF LWKAAK GEP
Sbjct: 133 IAYVGSNGDVFYSVSKFSNYGRLSGKNLAELQAGERVEIEQAKQDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 193 AWESPWGQGRPGWHIECSAMSTGCLGNHFDIHGGGMDLQFPHHENEIAQSEGATGEKFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N EKMSKSLGNFFT+R++ +RY +R F++++HYRSPLNYS LD A
Sbjct: 253 YWMHNGFVRINEEKMSKSLGNFFTVREVLKRYRSEVVRFFILTSHYRSPLNYSNEHLDEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ A+ +Y +L+ I+ + F M DD NT L+
Sbjct: 313 AVALTRLYTSLRG----------------IDAGEFEVEADYEARFREAMDDDFNTPVALS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A LN +K KQ+ L ++R + +LG+L A +
Sbjct: 357 VLFDMA-----RELNKVKDSD-KQRASQLAATIRGLGG-------VLGILQDDAE----R 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKETIW 419
LK+ + LT E + LI+ R A+KNK+++++D+IR L ++G+ L D+ G T W
Sbjct: 400 FLKEGDNQAEGLTAEQIETLIQARIDAKKNKNWAEADKIRDQLKQQGVILEDVPGGGTNW 459
Query: 420 R 420
R
Sbjct: 460 R 460
>gi|260892309|ref|YP_003238406.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
gi|260864450|gb|ACX51556.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
Length = 474
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 238/421 (56%), Gaps = 23/421 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + +P L+ +Y + Y D + PRVSDH+ +I ++I+ +I+
Sbjct: 73 KIIKRAAEEKMDPQELALKYIEAYFEDADQINIKRADVHPRVSDHLPEIVELISILIDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+FAV K P YG+LSG++L RAG RV KR+P DFALWK AK GEPS
Sbjct: 133 FAYAAEGDVYFAVRKFPAYGKLSGRQLSELRAGARVEPGENKRDPLDFALWKKAKPGEPS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ YL +FDIHGGG DLIFPHHENEIAQS AA Y
Sbjct: 193 WPSPWGEGRPGWHIECSAMALKYLGPEFDIHGGGSDLIFPHHENEIAQSEAATGRPFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG +T EKMSKSLGN F +R++ E Y P A+R FL+S HYRSPL Y+ L+ A+
Sbjct: 253 WLHNGFITVKEEKMSKSLGNVFLLRKVMELYPPPAVRLFLLSTHYRSPLAYTPEYLEGAA 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ L+ + L Q+ + + ++K +F A M DD NT+ L
Sbjct: 313 KAL----SRLRSSWLFLQEAQKQAEESSGGTEQLARLDKWEQDFTAAMDDDFNTARAL-A 367
Query: 302 AFQDALKFINS--SLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F D INS L L ++ L L S R+LGL P V+
Sbjct: 368 LFFDLAHEINSWAELRPLPPAPVLRRALLLWVSFN----------RVLGLFPERRGLPVV 417
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+Q +R + EE V L+E R AR+ KD++ +D+IR L GI L D T W
Sbjct: 418 EQ------ERTMVLEELVKLLVEIRQEARQRKDWATADRIRESLKNLGIVLEDTPAGTRW 471
Query: 420 R 420
R
Sbjct: 472 R 472
>gi|20808681|ref|NP_623852.1| cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|22257048|sp|Q8R7T3.1|SYC_THETN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|20517317|gb|AAM25456.1| Cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
Length = 467
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 240/422 (56%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + ++ R+ +EY D L T PR ++H++ I + I +I+
Sbjct: 72 KIINRAKEENTTEKEIAERFIEEYFKDADALGIKRATVHPRATEHIDDIIEFIKILIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+G+V+F K +YG+LS + ++ AG RV +D +K+NP DFALWKA K GEP+
Sbjct: 132 YAYVVDGNVYFETAKFKDYGKLSHKNIDELMAGARVEIDEKKKNPLDFALWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS AA Y
Sbjct: 192 WDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEAAYDQPFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G++ NNEKMSKS GNFFT+R++TE+Y P LR F++ AHYRSP+N+S+ LD A
Sbjct: 252 WMHIGYLNVNNEKMSKSKGNFFTVRELTEKYDPEVLRLFMLMAHYRSPINFSLDLLDQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
A Y+ L + V L K ++ +D I K + +F M DD NT+
Sbjct: 312 SA----YERLSNAVVNLKHLANITKDRELSDEEKDLIVKFDEYKKQFEEAMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ A K N++L+ K+ + L + L +LGL A +E+
Sbjct: 368 ISVLFEMA-KTANANLSGNSSKKLVEYILEMFLKLSD----------VLGLSYKNAETEI 416
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+E++L+LIEER ARK K++ +D+IR L +GI L D +
Sbjct: 417 --------------EDEEILRLIEERQKARKEKNWKLADEIRDKLKERGIILEDTPEGVR 462
Query: 419 WR 420
W+
Sbjct: 463 WK 464
>gi|357633334|ref|ZP_09131212.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
gi|357581888|gb|EHJ47221.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
Length = 485
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 177/412 (42%), Positives = 235/412 (57%), Gaps = 9/412 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN G ++ RY + DM L L +PR ++++ ++ DM ++I N
Sbjct: 72 KIIKKANSEGATSAEIAERYIAAFYEDMDRLGILRADAEPRATEYIAEMADMAARLIENG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DFALWKA+K GEP
Sbjct: 132 HAYRTPSGDVYFRVRSFDGYGKLSGRDVEDMRSGARVAPGEEKEDPLDFALWKASKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
WDSP+GPGRPGWH+ECS MS L DIHGGG DLIFPHHENEIAQS AA
Sbjct: 192 VWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFPHHENEIAQSEAATGSDFCR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+W+HNG V N EKMSKSLGNF TIR I ERY P LR FL+S+HYRSPL+YS LD A
Sbjct: 252 FWVHNGFVRINTEKMSKSLGNFVTIRTIYERYLPEVLRFFLVSSHYRSPLDYSDQALDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ IY E AL+ + ++ P +NKL + F M DDLNT+ +
Sbjct: 312 EKGIKRIYAAKGQMEQALT--RAKWSETKLPPEIGQELNKLEEGFTGAMDDDLNTAQAIG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + + +L K + + E+L +I ++ ILG+ + E L
Sbjct: 370 HVF----GLVRLAGRVLDDKTLAKSR-EAAEALGRILADLDTWSGILGVFGRDS-REFLA 423
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+LK L R + V L+ ER ARK KDF++SD IR +L G+ +MD
Sbjct: 424 ELKASRLARLGIDAARVDGLVAERQEARKTKDFARSDAIRDELAGLGVTVMD 475
>gi|319790489|ref|YP_004152122.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114991|gb|ADU97481.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 472
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/425 (41%), Positives = 241/425 (56%), Gaps = 33/425 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+ + G +S +Y Y DM L PTY+P+V++H+ +I +MI +I
Sbjct: 73 KIIKRSKEEGIPWYEVSKKYIASYEEDMEALNVKEPTYKPKVTEHIREIIEMIDGLIQKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+VE P YG+LS ++ E AG RV +K+NP DFALWK +K GEP
Sbjct: 133 HAYEADGDVYFSVESFPEYGKLSKRKTEELLAGARVEPGEKKKNPLDFALWKKSKEGEPG 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS YL DIHGGG DLIFPHHENEIAQS + + Y
Sbjct: 193 WESPWGVGRPGWHIECSAMSMKYLGETIDIHGGGFDLIFPHHENEIAQSESYTGKTFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTI++I +++ P LR FL+S HYRSP++++V +L A
Sbjct: 253 WIHNGFVMVNREKMSKSLGNFFTIKEILKQFSPDTLRLFLLSTHYRSPIDFTVERLKEAE 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ + ++ + +E K I+ + R EF A M DD NT+ L G
Sbjct: 313 RALKRLTTFIESVKAVEKLPEEGEKGEPID------VESARREFEAAMDDDFNTAKAL-G 365
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQL------SLIESLRKIENEVKEVLRILGLLPPGAY 355
A + +K N LK K K+Q++ SL+++ R EN L+ LG
Sbjct: 366 ALYELVK----RANTLKDKALKRQKITPSERESLVDAARFTEN----ALKTLGFKLEREQ 417
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
SE L E + LI+ R RK K+F +D IR L GI L D+
Sbjct: 418 SE------------GGLEEALIELLIQVRGELRKKKEFQLADLIRDRLKELGITLEDLPT 465
Query: 416 ETIWR 420
T++R
Sbjct: 466 GTVYR 470
>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
Length = 479
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 251/420 (59%), Gaps = 21/420 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ ++ +++ + + + DM L L P Y PR +++++ + + ++I
Sbjct: 73 KIIKRANEENKSINEITDFFIKAHDEDMDKLNILRPDYTPRATEYIDGMIKLCEKLIEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F V +YG+LS + L++ AG RV V+ K +P DFALWK +K GEP
Sbjct: 133 FAYESNGDVYFKVRAFKDYGKLSKRDLDDLLAGARVDVNEIKEDPLDFALWKRSKEGEPG 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MSA L FDIHGGG DLIFPHHENEIAQS AA Y
Sbjct: 193 WDSPWGRGRPGWHIECSVMSAEILGIPFDIHGGGKDLIFPHHENEIAQSEAAEGKEFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTIR + + P LR FL++ HYRSPL++S L A
Sbjct: 253 WIHNGFVNINKEKMSKSLGNFFTIRDVLKEVDPEVLRFFLLTTHYRSPLDFSFENLLEAE 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+A+ IY + + E A+ ++ + +I ++ +++ + +F M DD NT+ ++
Sbjct: 313 NALDRIYTAIDELESAVFNNKKPAQKGKI----DEIVDRFKRDFEESMDDDFNTASAISN 368
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR-ILGLLPPGAYSEVLQ 360
F+ + +N+L ++ + L+ ++ + E EVK ++R +LG+L A
Sbjct: 369 IFE-----LIKGVNLLLSERLNSEDLNYLKV--RFE-EVKAIIRDVLGILTKTASEWFKM 420
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L + E ++ +LIEER AR+NKDFSK+D IR +L KG+ L+D T +R
Sbjct: 421 NLS--------IDESELQKLIEEREIARRNKDFSKADAIRNELKTKGVELLDTPTGTKFR 472
>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|187629827|sp|A1WT89.1|SYC_HALHL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 459
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 242/422 (57%), Gaps = 41/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE +L++R+ + D + L PP ++PR ++ +E + +I ++I
Sbjct: 73 KIIRRAAENGEPMTALTDRFIRAMHEDCSALGVEPPDHEPRATERLESMIALIEELIAGG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV+F+V P YG+LSG+R+E R+G R+ D K +P DF LWKAAK+GEP
Sbjct: 133 HAYVGDNGDVYFSVASFPEYGKLSGRRVEELRSGSRIEPDEAKHDPVDFVLWKAAKSGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAMS L S FDIHGGG+DL FPHHENEIAQS A V+
Sbjct: 193 AWPSPWGDGRPGWHIECSAMSRDLLGSHFDIHGGGVDLQFPHHENEIAQSECASGHRFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNGHV ++EKM+KSLGNFFT+R + + +R FL+S+HYRSPLNY+ LD A
Sbjct: 253 YWMHNGHVRIDDEKMAKSLGNFFTVRDVLAEHPAEVVRLFLLSSHYRSPLNYTGDALDEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y L+ PAA ++ R+ F M DD NT L
Sbjct: 313 RGGLERLYNALRGL-----------------PAAAPARSQARERFREAMDDDFNTREALA 355
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N L++ S LR++ GA +LQ
Sbjct: 356 VLFDGA-----REINRLREAGDASGAASAAAELREL----------------GAVLGLLQ 394
Query: 361 QLKDKALKR--AELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + L+ A+ E++ L+ +R AARK KDF+++D+IR +L +GI L D + T
Sbjct: 395 QDPEAYLRGDVADAEAEEIESLVAQRTAARKAKDFAEADRIRDELQARGIELEDTPEGTK 454
Query: 419 WR 420
WR
Sbjct: 455 WR 456
>gi|302872638|ref|YP_003841274.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575497|gb|ADL43288.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 465
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/416 (41%), Positives = 243/416 (58%), Gaps = 28/416 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ R+ +EY D L T PR ++ + + +I ++I+
Sbjct: 72 KMINRANKEGITVFELAERFIKEYYKDADRLNVKRATKNPRATEEIPDMIVLIQKLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFALWKA K GEP+
Sbjct: 132 YAYVVDGDVYFRTRKFAEYGKLSHKNIEELVAGARVDLSEKKEDPLDFALWKAKKEGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS AA +
Sbjct: 192 WFSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQSEAATGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PLN+S+ ++ A
Sbjct: 252 WIHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNFSLDLIEQAE 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ IY ++ E + Q ++ N + I +L+ +F M DDLNT+ TG
Sbjct: 312 VALKRIYTCYENLEFLI---QNETSSSENNDKLKTVIEQLKAKFIEAMEDDLNTAEA-TG 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
+ ++ IN+ N K E+L ++ +KE+ ILG +L+Q
Sbjct: 368 YLFEMVREINTHANFCSK-----------ETLTFAKDVLKELCSILG---------ILEQ 407
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
K E +++L ++E+R ARK K+F+++D+IR +L G ++D + T
Sbjct: 408 YSSK----EEYVPQEILDMVEKRNQARKLKNFAEADRIRDELKSLGYIVLDTPQGT 459
>gi|27262230|gb|AAN87396.1| Cysteinyl-tRNA synthetase [Heliobacillus mobilis]
Length = 454
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 179/425 (42%), Positives = 247/425 (58%), Gaps = 24/425 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN++GE+P+ L+ R+ +EY D L P T P+VS HM I MI ++
Sbjct: 46 KIINRANEVGEDPIQLAARFVEEYFQDAKALNVRPATVHPKVSTHMGDIIAMIRRLEEKG 105
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +EGDV+F++ +YG+LSG+ E+ +AG RV VD RKR+P DFALWK K GEPS
Sbjct: 106 HAYEMEGDVYFSIPSFKDYGKLSGRSQEDMQAGARVEVDERKRHPMDFALWKKVKPGEPS 165
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS A + ++
Sbjct: 166 WDSPWGKGRPGWHIECSAMSQKYLGDTFDIHGGGQDLIFPHHENEIAQSEACTSTAPMAR 225
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG +T N EKMSKSLGNFFT+RQI +++ +R +L+S HYRSPL++ +L++A
Sbjct: 226 YWLHNGFITVNQEKMSKSLGNFFTLRQILKKFSGDVVRFYLLSTHYRSPLDFDDTKLEAA 285
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-----DCINKLRDEFHARMSDDLNT 295
+ + + E AL R PAA+ D K +++F M DD NT
Sbjct: 286 QKGLQRLRTGRRLLEEALKDSARQSGNNR--PAAQREKLADQWTKTKNDFREAMDDDFNT 343
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ L+ F D + N+ L+ + + QL LR + ++ ++G+
Sbjct: 344 ALALSLLF-DLARETNAFLHGGEGLGAEDLQL-----LRHVAETFDQLSGVMGI----EL 393
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
SE + D L + + LI RA ARK KD++ +D+IR L I + D +
Sbjct: 394 SETAEAADDS------LVDGLMDLLISLRAEARKKKDWATADKIRDGLKELAIIIEDTPQ 447
Query: 416 ETIWR 420
W+
Sbjct: 448 GARWK 452
>gi|158521678|ref|YP_001529548.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
gi|158510504|gb|ABW67471.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
Length = 479
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 245/422 (58%), Gaps = 21/422 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G+ ++ +Y E+ DM L T +P+ ++H++ I +I ++N
Sbjct: 74 KIIHRAAEEGKTSEQIAEKYIAEFYRDMDALFVQRATVEPKATEHIDDILAVIQILVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDVFF+VE P YG+LSG++L+ AG R+ VD RKRNP DF LWKA K GEPS
Sbjct: 134 VAYEAGGDVFFSVEAFPGYGKLSGRKLDQMEAGARIEVDKRKRNPFDFVLWKAEKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIEC+AMS+ YL FDIHGGG DLIFPHHENEIAQS AA +
Sbjct: 194 WESPWGRGRPGWHIECTAMSSRYLGQTFDIHGGGKDLIFPHHENEIAQSEAAFGREFARF 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSL NF I +I E YHP +R FL+S+HYRSP+++S + A
Sbjct: 254 WVHNGFVQINQEKMSKSLNNFKMINEILEAYHPETVRLFLLSSHYRSPIDFSDTSMAEAG 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y L E AL+P E + +PA++ + + F M DD NT+ +
Sbjct: 314 AGLDKLYTALGRVE-ALTPSGE-----KPSPASDGDAGEYWNSFCQAMDDDFNTARAVAA 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVL 359
F+ A + IN L+ Q L + + +++ +LGL P Y E
Sbjct: 368 LFETA-RHINRLLD--------QAGDLLTADVSAHYDVMRKSGDVLGLFNTPAQVYFEGR 418
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKETI 418
+Q A K+ + ++ +++ +R AARK KDF+K+DQ+R LT + L D T
Sbjct: 419 KQ---AAAKKDAVDPAEIDRMVAQRVAARKAKDFAKADQLRKQLTDLNVVLEDSPDGTTT 475
Query: 419 WR 420
W+
Sbjct: 476 WK 477
>gi|390960204|ref|YP_006424038.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
gi|390518512|gb|AFL94244.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
Length = 451
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 240/419 (57%), Gaps = 20/419 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+P L+ R+ + +L DM L+ P PRV++HME I + + ++
Sbjct: 49 KIIKRANETGEDPKELAERFLRYFLEDMRALKVKPADIYPRVTEHMEDIIEFVRKLQEKG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V K +YG+LS +LE+ G RV KRNP DFALWK AK GEP
Sbjct: 109 YAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPEDFALWKKAKPGEPK 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 169 WSSPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQSEACTGHEWVRY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G + N EKMSKSLGNF TIR++ ERY P +R F++ HYRSPL+Y+ ++ A
Sbjct: 229 WLHTGFLMVNGEKMSKSLGNFVTIREMLERYDPEVIRLFILQRHYRSPLDYTEEGMEHAK 288
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ VA+ + + ++ A + I +F+ M DD NT+ L
Sbjct: 289 NNLERLYNTLENIRVAMERAEISFRWEKLEFEAYEAIRDAGRKFYEAMDDDFNTAEALKA 348
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A +N L + + PK+ L +I +EV G + + ++
Sbjct: 349 VFE-ASNAVNRYLTEV--ETPKESVLRKAWEFFRIVSEV-----------FGIFEDYFRE 394
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+RA EE + LI+ RA RK ++F+ +D+IR +L GI L D + T+W+
Sbjct: 395 ------QRAGEEEELIRLLIDVRAQLRKERNFALADRIRDELRNLGIQLEDTPQGTVWK 447
>gi|315230286|ref|YP_004070722.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183314|gb|ADT83499.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
Length = 474
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 244/419 (58%), Gaps = 20/419 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+P L+ ++ + +L DM L+ P PRV++H+E I D + ++
Sbjct: 72 KIIRRAQETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIEDIIDFVKKLEEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V++ +YG+LSG +LE R G RV KRNP DFALWK AK GEP
Sbjct: 132 YAYEGSDGVYFEVQRFRDYGKLSGIKLEELRKGARVEPGEGKRNPEDFALWKKAKPGEPK 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL +FDIHGGG DLIFPHHENEIAQ+ A V Y
Sbjct: 192 WDSPWGEGRPGWHIECSTMSTKYLGEQFDIHGGGNDLIFPHHENEIAQTEACTGKEWVRY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V EKMSKSLGNF TIR++ +RY P +R F++ HYRSPL+Y+ + A
Sbjct: 252 WLHTGFVMVKGEKMSKSLGNFVTIRELLQRYSPEVIRFFVLQKHYRSPLDYTEEGIQHAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y T+++ +AL + K ++ + I + + +F+ M DD NT+ +
Sbjct: 312 NNLEKLYNTIENIRIALEKAEIPFKWSKEEFELYEVIREAKRKFYEAMDDDFNTAEAMKP 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A +N L ++K PK+ LRK K V + G+ Y + ++
Sbjct: 372 IFEVA-NAVNKYLAKVEK--PKES------VLRKALEFFKMVGEVFGIFE--EYFKETKE 420
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
K++ L + LI+ RA RK K+++ +D+IRA+L GI L D + TIW+
Sbjct: 421 TKEEEL---------IELLIQVRAELRKQKNYALADKIRAELRELGIQLEDTPQGTIWK 470
>gi|406928420|gb|EKD64226.1| hypothetical protein ACD_51C00046G0015 [uncultured bacterium]
Length = 462
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 246/419 (58%), Gaps = 32/419 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ + EY D L+ P QP+ + ++ Q+ ++I ++I
Sbjct: 74 KMINRANKEGITVKQLAEKIIPEYQEDYGQLKIDKPDTQPKATQYIPQMIELIKKLIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +E V++ VEK +YG+LSGQ + +AG R+ D +KR+P DF LWK AK EPS
Sbjct: 134 YAYELEDGVYYEVEKFAHYGKLSGQNQDELKAGARIEKDDKKRHPHDFVLWKKAKPDEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAMS L FDIHGGG+DLIFPHHE+EIAQS AA S V Y
Sbjct: 194 WPSPWGEGRPGWHIECSAMSMDLLGETFDIHGGGMDLIFPHHEDEIAQSEAATGKSYVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG +T NNEKMSKSLGNFFT+++I +Y+P +R+ +I HYRSP+N+S LD +
Sbjct: 254 WLHNGFITINNEKMSKSLGNFFTLKEIFAKYNPNTVRYMIIGTHYRSPINFSHELLDQSE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+A+ ++D + L ++ +T++ +PA + + +F RM DD +T+ L G
Sbjct: 314 NAL----SRIKDFLINLKNYK--NETSKSSPALKKTLENAIKDFEKRMDDDFDTAGGL-G 366
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A + +K +N + K L+ + KIE +K++ +L +LP S
Sbjct: 367 ALYNLIKEVNILM--------KNGDLAETDK-EKIETTLKKIDSVLCILPEVETS----- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+V I+ R ARKNKDF+ +D+IR DL +GI L D + TIW+
Sbjct: 413 -----------VNPEVENAIKARTDARKNKDFALADKIRKDLESQGIILEDTPQGTIWK 460
>gi|372489694|ref|YP_005029259.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
gi|359356247|gb|AEV27418.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
Length = 476
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 180/421 (42%), Positives = 239/421 (56%), Gaps = 21/421 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE L++R+ D A L PT++PR ++++ Q+ +I Q+ N
Sbjct: 73 KIIRRAVENGETIGQLTDRFIAAMDEDAAALGVQKPTHEPRATEYVPQMLGLIGQLEANG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV F+V K P YGRLSG+ L++ RAGERV VDS K++P DF LWK AKAGEP
Sbjct: 133 LAYKAADGDVNFSVRKFPGYGRLSGKSLDDLRAGERVEVDSAKQDPLDFVLWKHAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQS A + V+
Sbjct: 193 AWESPWGAGRPGWHIECSAMSSDLLGKHFDIHGGGQDLQFPHHENEIAQSEGAHGCTFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V ++EKMSKSLGNFFTIR + ++Y +R F++ AHYRSPLNYS LD A
Sbjct: 253 YWMHNGFVRVDDEKMSKSLGNFFTIRDVLKKYDAEVVRFFILRAHYRSPLNYSDAHLDDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L K A A D F A M DD NT L
Sbjct: 313 RQALTRLYTAL--------------KAAPAEAVAVDWNEAHAQRFQAAMDDDFNTPEALA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + + N K Q +L L + ++ L+ + G + L
Sbjct: 359 VLFD-----LANEANRSKDSAVAAQLKALAGVLGLLARSPEDYLKGRVVYGSGNATMSLS 413
Query: 361 QLKDKA-LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ L ++E D+ I+ R A+K K+F+++D++RA+L GI L D + T W
Sbjct: 414 GNGEGTLLVGGGISESDIEARIQARIDAKKAKNFAEADRLRAELLAAGIVLEDSAQGTTW 473
Query: 420 R 420
R
Sbjct: 474 R 474
>gi|56460141|ref|YP_155422.1| cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
gi|61216136|sp|Q5QYP3.1|SYC_IDILO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56179151|gb|AAV81873.1| Cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
Length = 459
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 245/420 (58%), Gaps = 37/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ ++ R+ +E D L + P +PRV+ HM++I MI ++I N
Sbjct: 74 KIIKRAAENGEDFHQVTERFIREMHKDFDALNLVRPDIEPRVTSHMDEIILMIERLIENG 133
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV F V +YG+LS Q LE +AG RV VD+ K++P DF LWK+AK GEP
Sbjct: 134 NAYEAGNGDVLFDVSTFNDYGKLSRQDLEQLQAGSRVDVDAAKQDPLDFVLWKSAKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ +L S FDIHGGG DL FPHHENEIAQSC A Q V
Sbjct: 194 SWSSPWGEGRPGWHIECSAMNKKHLGSTFDIHGGGSDLSFPHHENEIAQSCCANQSEYVK 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V +NEKMSKSLGNFFTIR + E+Y +R+FL+S+HYRS LNY+ LD A
Sbjct: 254 YWMHSGMVQVDNEKMSKSLGNFFTIRSVLEQYDAETVRYFLLSSHYRSQLNYTQENLDQA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D ++P A+E+ +K F M DDLN ++
Sbjct: 314 HSALERLYTALRD----ITP----------QTASEELRSKYWQSFQQAMDDDLNAPEAMS 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ I +N ++ P ++ ++ + + E+ ++GLL E LQ
Sbjct: 360 VLFE-----IAREINRNRESAP--------DTAAQLAHVLLELAEVMGLLQQSP-EEFLQ 405
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D K + LI +R AR++KD++ +D+ R +LT GI L D + T WR
Sbjct: 406 GDDDDVAK--------IEALIAKRNQAREDKDWAAADEARDELTNMGIVLEDGAEGTRWR 457
>gi|345021352|ref|ZP_08784965.1| cysteinyl-tRNA synthetase [Ornithinibacillus scapharcae TW25]
Length = 466
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/424 (41%), Positives = 238/424 (56%), Gaps = 38/424 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+LGE+ ++SNRY YL D+ L TY PRV+D M+ I I+ ++
Sbjct: 74 KIIKRANELGEDVFAVSNRYIDAYLEDVEKLGVKKATYNPRVTDTMQDIIVFISNLVEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K +P DFALWKAAK GE S
Sbjct: 134 YAYEAEGDVYFKPRAFEEYGKLSHQSIDELRSGARIQVGEKKDDPLDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + +Y
Sbjct: 194 WDSPWGLGRPGWHIECSAMAKKYLGDTIDIHAGGQDLTFPHHENEIAQSEANNGKTFANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF R + E++ P +R F++S YR P+N+S L+SA
Sbjct: 254 WMHNGYININNEKMSKSLGNFVLTRDLLEKHDPDVIRFFMLSVQYRHPINFSEELLESAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKLRDEFHARMSDDLNTS 296
+++ I Q+ H K++ N I+ LR +F M DD NT+
Sbjct: 314 NSLERIKTAYQNL--------GHRKSSSTNLDDNTTEWLEKISALRKKFETEMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N LN K P E + +N +K L ILG+ G S
Sbjct: 366 NAISVLF-DLTKEANVYLNE-KHTSP--------EVIEAFQNLLKSFLEILGIKLEGNVS 415
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
L +E++ LIEER ARK ++F+++D+IR L K I L D +
Sbjct: 416 ---------------LLDEEIETLIEERNEARKTRNFARADEIRDLLKEKNIILEDTPQG 460
Query: 417 TIWR 420
W+
Sbjct: 461 VRWK 464
>gi|167629446|ref|YP_001679945.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
gi|229558718|sp|B0TC35.1|SYC_HELMI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167592186|gb|ABZ83934.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
Length = 481
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/426 (41%), Positives = 251/426 (58%), Gaps = 27/426 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA ++GE+P++++ R+ +EY D L P T P+VS HM +I MI ++
Sbjct: 74 KIIHRAKEIGEDPIAMAARFVEEYYRDAKALNVRPATIHPKVSAHMAEIIAMIGVLVEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY + GDV+F++ +YG+LSG+ LE+ +AG RV V+ RKR+P DFALWK AK GEPS
Sbjct: 134 HAYELGGDVYFSIPSFKDYGKLSGRSLEDLQAGARVDVNERKRHPMDFALWKGAKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS A S ++
Sbjct: 194 WDSPWGKGRPGWHIECSAMSRKYLGDAFDIHGGGQDLIFPHHENEIAQSEACTGTSPMAR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG +T N EKMSKSLGNFFT+R+I +R+ +R +L+S HYRSP+++ +L++A
Sbjct: 254 YWLHNGFITVNQEKMSKSLGNFFTLREILKRFPGDVIRFYLLSTHYRSPIDFDDSKLEAA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-----EDCINKLRDEFHARMSDDLNT 295
+ + + + E AL+ GK PA E+ + F M DD NT
Sbjct: 314 QKGLQRLRTSRRLIEEALAA---SGKEGAERPAGQREKLEEQWLAAKKGFREAMDDDFNT 370
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ L+ F D + N+ L+ P+ +QL L ++ +E+ +LG+
Sbjct: 371 ALALSMLF-DLAREANTFLHGGFALTPEDRQLLL-----QVAETFEELAGVLGI------ 418
Query: 356 SEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
L A + T + ++ LI RA ARK KD++ +D+IR L GI + D
Sbjct: 419 -----DLAGGAAAADDNTVDGLMNLLIGIRAEARKKKDWATADRIRDGLKELGIVIEDTP 473
Query: 415 KETIWR 420
+ W+
Sbjct: 474 QGARWK 479
>gi|218778624|ref|YP_002429942.1| cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760008|gb|ACL02474.1| Cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 474
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/427 (41%), Positives = 254/427 (59%), Gaps = 36/427 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ + +LS Y E+ DM L L PT +PR ++ +++I ++ ++++
Sbjct: 74 KIINRANERDMDCQALSEIYIDEFHRDMDALAVLRPTLEPRATEFIKEIIEVTSKLVEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F V +YG+LSG++LE+ AG RV VDSRK++P DFALWKA K GEP+
Sbjct: 134 HAYVVDGDVYFDVRSFESYGKLSGRKLEDMEAGARVKVDSRKKDPFDFALWKAKKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS L FDIHGGG DLIFPHHENE+AQS AA V Y
Sbjct: 194 WESPWGEGRPGWHIECSAMSWSRLGETFDIHGGGQDLIFPHHENEVAQSEAAFGQQFVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V ++EKMSKSL NF T+++I +++HP A+R FL+S HYRSP++++ + A+
Sbjct: 254 WMHNGFVNIDSEKMSKSLNNFLTVKEILDQFHPEAVRLFLLSKHYRSPVDFTEQAMKEAA 313
Query: 242 DAVFYIYQTLQDCEVALS----PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
+ +Y LQ ++ FQ G +R F A M DD NT+
Sbjct: 314 SGLDRVYSCLQRILESVGGLDDDFQISGHWSR---------------FCACMDDDFNTAG 358
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE--NEVKEVLRILGLL--PPG 353
L G +A++ +N L+ L+ + +R E + ++ +LG+ P
Sbjct: 359 AL-GILFEAVRDVNRLLD---------GDLTGDDQVRATEAGAAIVKMGGVLGMFQEDPV 408
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
AY + K++A + V LI +R+ ARK+KD++ +D IR LT G+A+ D
Sbjct: 409 AY---FEGKKEQAAQDGGFDPAMVDDLIAKRSQARKDKDWNTADAIRDQLTEMGVAIEDT 465
Query: 414 GKETIWR 420
TIW+
Sbjct: 466 PDGTIWK 472
>gi|312621501|ref|YP_004023114.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
gi|312201968|gb|ADQ45295.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
Length = 465
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/417 (41%), Positives = 247/417 (59%), Gaps = 30/417 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ R+ QEY D L T PR ++ +E + +I +I+
Sbjct: 72 KMINRANKEGVTVFELAERFIQEYYKDADRLNVKRATKNPRATEEIEDMIALIQTLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFALWKA K GEP+
Sbjct: 132 YAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEKKEDPLDFALWKAKKEGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ YL DIH GG DLIFPHHENEIAQS A+ +
Sbjct: 192 WSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPHHENEIAQSEASTGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PLN+S+ ++ A
Sbjct: 252 WLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNFSIDLIEQAE 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-EDCINKLRDEFHARMSDDLNTSHILT 300
A+ IY ++ E + ++G T+ + + + + +L+ +F M DDLNT+ T
Sbjct: 312 SALKRIYTCYENLEYLI----KNGTTSNSSDSTLKAVLKELKAKFIDAMEDDLNTAEA-T 366
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
G + ++ IN+ N K + L + +KE+ ILG +L+
Sbjct: 367 GYLFEMVREINTHSNTCSK-----------DVLILARDTLKELCSILG---------ILE 406
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q ++ K+ E+ E +L+L+E+R ARK K+F ++D+IR DL G ++D + T
Sbjct: 407 QYEE---KKDEIPPE-ILELVEKRNEARKAKNFLEADRIRDDLRSLGYIVLDTPQGT 459
>gi|409095424|ref|ZP_11215448.1| cysteinyl-tRNA ligase [Thermococcus zilligii AN1]
Length = 476
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 238/419 (56%), Gaps = 20/419 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+P L+ ++ + +L DMA L+ P PRV++H+ I + I ++
Sbjct: 74 KIIKRANETGEDPKELAEKFLRYFLEDMAALKVKPADIYPRVTEHVADIIEFIRKLQEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V + +YG+LSG ++E+ G RV K+NP DF LWK AK GEP
Sbjct: 134 YAYEGSDGVYFEVRRFKDYGKLSGIKVEDLVKGARVEPGEGKKNPEDFVLWKKAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQ+ A V Y
Sbjct: 194 WSSPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQTEACTGHEWVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + N EKMSKSLGNF TIR+ +RY P +R F++ HYRSPL+Y+ ++ A
Sbjct: 254 WMHTGFLMVNGEKMSKSLGNFITIREALKRYDPEVIRLFVLQKHYRSPLDYTEEGMEHAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ VA+ + + + A + I + R +F+ M DD NT+ L
Sbjct: 314 NNLEKLYNTLENIRVAMERAEISFRWEKHEFEAYEAIREARKKFYEAMDDDFNTAEALKA 373
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A +N L + + PK+ L K+ EV G + + ++
Sbjct: 374 VFE-ASNAVNRYLTQV--ETPKESILRKAWEFFKVVGEV-----------FGIFEDYFKE 419
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
++A EE + L+E RA RK K+F+ +D+IR L GI L D + T+W+
Sbjct: 420 ------QKAGEEEELIKLLVEVRAQLRKEKNFALADKIRTQLRELGIQLEDTPQGTVWK 472
>gi|333980492|ref|YP_004518437.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823973|gb|AEG16636.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 483
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 249/423 (58%), Gaps = 18/423 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G + L+L+ +Y EY D L P PRVS+H+ +I D+I+ +I
Sbjct: 72 KIINRAREEGVDALALARKYIDEYYRDAEALNVRPADVHPRVSEHLPEIIDLISTLIEKK 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F + P YG+LSG+ LE +AG RV VD RK++P DFALWKAAK GEP+
Sbjct: 132 AAYVVDGDVYFDISAFPEYGKLSGRTLEEMQAGARVEVDPRKKHPMDFALWKAAKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL + FDIHGGG DL+FPHHENEIAQ+ AA V Y
Sbjct: 192 WDSPWGKGRPGWHIECSAMALKYLGNNFDIHGGGFDLVFPHHENEIAQAEAATGRPFVRY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG +T N EKMSKSLGNFF +R+I +R+ P +R FL+S HYRSPL++ ++ +A
Sbjct: 252 WMHNGFITVNQEKMSKSLGNFFLVREILDRFPPEVVRFFLLSTHYRSPLDFDDEKMAAAG 311
Query: 242 DAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCINKLRD---EFHARMSDDLNTSH 297
+ +++ AL P +E +I P E+ I L +F A M DD NT+
Sbjct: 312 RGLERFKNSIRLLTEALDRPSRE-----QIEPEDEEFIAALEKHHRDFVAAMDDDFNTA- 365
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ G + + + +N+ L+ P + L L + NEV + R+
Sbjct: 366 LAVGIWFELAREVNAYLHG-TAGSPCRAALEKAMDLFRSFNEVLGLFRV-----DERTGR 419
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+L ++ + K L E + L+E R AR KD++ +D+IR L GI L D
Sbjct: 420 IL--IEGRHAKSDGLEEALIELLLEVRQQARAKKDWATADRIRDRLKELGIILEDTPGGV 477
Query: 418 IWR 420
W+
Sbjct: 478 RWK 480
>gi|57640379|ref|YP_182857.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|68735029|sp|Q5JD45.1|SYC_PYRKO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|57158703|dbj|BAD84633.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 476
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/421 (41%), Positives = 236/421 (56%), Gaps = 24/421 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+P L+ ++ + +L DM L+ P PRV++H++ I D I ++
Sbjct: 74 KIIKRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQDIIDFIRKLQEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V K +YG+LS +LE+ G RV K+NP DFALWK AK GEP
Sbjct: 134 YAYEGSDGVYFEVRKFKDYGKLSKVKLEDLVKGARVEPGEGKKNPEDFALWKKAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQ+ A V Y
Sbjct: 194 WESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGSDLIFPHHENEIAQTEACTGHEWVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + N EKMSKSLGNF TIR+ ERY P +R F++ HYRSPL+Y+ L+ A
Sbjct: 254 WMHTGFLMVNGEKMSKSLGNFVTIREALERYDPEVIRLFVLQRHYRSPLDYTEEGLEHAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ VA+ + K A + I R +F+ M DD NT+ L
Sbjct: 314 NNLERLYNTLENIRVAMERAEISFKWGEEEFEAYEAIRDGRKKFYDAMDDDFNTAEALKA 373
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ + IN L ++K PK+ LRK K V + G+
Sbjct: 374 VFEVS-NAINRYLTQVEK--PKES------ILRKAWEFFKMVSEVFGIF----------- 413
Query: 362 LKDKALKRAELTEEDVL--QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ + + EE+ L LI+ RA RK + F +D+IR +L GI L D + T+W
Sbjct: 414 --EDYFREQKAGEEEALIKLLIDVRAQLRKERKFDLADKIRDELRNLGIQLEDTPQGTVW 471
Query: 420 R 420
+
Sbjct: 472 K 472
>gi|344940190|ref|ZP_08779478.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
gi|344261382|gb|EGW21653.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
Length = 492
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/423 (43%), Positives = 245/423 (57%), Gaps = 39/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ L+ R+ D L LPP +PR + + I MI +++ D
Sbjct: 103 KIIQRAIENGEDYGKLTERFIDAMHEDERALAVLPPDLEPRATQSIADIISMIKTLVDKD 162
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDVF+AV K +YGRLSG+ L++ +AGERV VD KRNP DF LWK AKA EP
Sbjct: 163 LAYVGSNGDVFYAVTKFKDYGRLSGKNLDDLQAGERVDVDLAKRNPMDFVLWKMAKANEP 222
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 223 AWDSPWGLGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQSEGATGEKFVN 282
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V ++EKMSKSLGNFFT+R++ +Y P +R F++S+HYRSPLNYS QL+ A
Sbjct: 283 VWMHNGFVRVDDEKMSKSLGNFFTVREVLNQYKPEIIRFFILSSHYRSPLNYSDEQLNDA 342
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ E E R F M DD NT L
Sbjct: 343 KAALTRLYTALRGVETTAEAAIEEAYKTR---------------FEQAMDDDFNTPVALA 387
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F D + +N + K+ +Q+ +L +L+ + +LG+L P A+
Sbjct: 388 VLF-DLARDLNKA-----KELDQQKACALAATLKYLSG-------LLGILQDDPDAF--- 431
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKET 417
L+ D A+ L EE V Q I+ R A+K KD++ +D+IR DL +G+ L D T
Sbjct: 432 LKGSGDAAV----LGEETVEQQIQARLDAKKAKDWALADKIRNDLKEQGVILEDSPDGTT 487
Query: 418 IWR 420
WR
Sbjct: 488 SWR 490
>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
Length = 487
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 176/433 (40%), Positives = 254/433 (58%), Gaps = 35/433 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + +P++L+ +Y +EY D A L T PRVS+H+++I +MI I+ N
Sbjct: 74 KIINRAREENTDPITLAAKYIREYFKDAAALGVREATVHPRVSEHLDEIIEMIRGIMKNG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+VE YG+LSG+ LE+ +AG RV VD+RKR+P DFALWKAAK GEP+
Sbjct: 134 YAYQLDGDVYFSVESFKGYGKLSGRSLEDMQAGARVDVDTRKRHPMDFALWKAAKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQ--SCAACQDSNV 179
WDSPWG GRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQ + A C
Sbjct: 194 WDSPWGKGRPGWHIECSAMANKYLGMGFDIHGGGFDLIFPHHENEIAQAEAYAGC-GPFA 252
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YWMHNG +T N EKMSKSLGNFFT+R+I +Y P +R +++S HYRSPL++ +L+
Sbjct: 253 RYWMHNGFITVNEEKMSKSLGNFFTVREILAKYDPEVVRFYMLSTHYRSPLDFDDTKLEM 312
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL--------RDEFHARMSD 291
++ ++ L + E L + G+ NP E + L RD F M D
Sbjct: 313 NRKSLSRLHNALDNIESILKT-NKFGEVE--NPELEKALADLLRAREKAVRD-FEEAMDD 368
Query: 292 DLNTSHILTGAF---QDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 348
D NT+ + F +D+ FI+++ + +L++ ++ +V + LG
Sbjct: 369 DFNTALAIAVLFDLARDSNAFIHAATSAGGD--------ALLQEVKGALQQVFDTFMKLG 420
Query: 349 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE-RAAARKNKDFSKSDQIRADLTRKG 407
+VL + + + + ++Q+I + R+ AR KD++ +D IR L G
Sbjct: 421 --------QVLGLFEKRGTQGDTGLVDRLMQIILDIRSEARARKDWATADGIRNKLNELG 472
Query: 408 IALMDMGKETIWR 420
I + D + W+
Sbjct: 473 IIIEDSPQGARWK 485
>gi|114330220|ref|YP_746442.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
gi|122314719|sp|Q0AJJ4.1|SYC_NITEC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114307234|gb|ABI58477.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
Length = 467
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/422 (42%), Positives = 248/422 (58%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E +L+ RY Q D A L + P+++PR ++ +E + MI +++
Sbjct: 73 KIIRRALENHEPFGALTARYIQAMEEDAAALGIISPSFEPRATECIESMVTMIESLLSKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDVF+ V + P YG+LSG+ L++ RAGERV +D+ KR+P DF LWKAAK EP
Sbjct: 133 LAYVANNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDTNKRDPLDFVLWKAAKPDEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAMS HYL +FDIHGGG DL FPHHENEIAQS +V+
Sbjct: 193 SWDSPWGKGRPGWHIECSAMSGHYLGERFDIHGGGQDLQFPHHENEIAQSEGVHGHPHVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V +NEKMSKSLGNFFT+R++ RY P +R F++ AHYRSPLNYS L+ A
Sbjct: 253 YWMHNGFVRVDNEKMSKSLGNFFTVREVLARYQPEVVRFFIVRAHYRSPLNYSDAHLNDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK-LRDEFHARMSDDLNTSHIL 299
+A+ +Y L++ + + + A A D +N F A M+DD NT +
Sbjct: 313 RNALERLYTALKNHAPSQA------QAAEEATATIDWVNDGYAQRFMAAMNDDFNTPEAV 366
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F A + + SL+++L ILGLL
Sbjct: 367 AVLFDLASE---------ANRTGNSHYASLLKALGG----------ILGLLQ----QSPR 403
Query: 360 QQLKDKALKRAE-LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q L+ A + + + E++ ++I++R ARK K+F+++D +R L GI L D + T
Sbjct: 404 QYLQHPAHPQNDHHSIEEIERMIQQRLQARKEKNFAQADALRQQLAEAGIILEDGPQGTT 463
Query: 419 WR 420
WR
Sbjct: 464 WR 465
>gi|363893842|ref|ZP_09320936.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
gi|361963344|gb|EHL16422.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
Length = 466
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 252/421 (59%), Gaps = 32/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN+ G P+ L+++Y +EY D + T PRV++++++I D I +I+
Sbjct: 72 KIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEIIDFIQDLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFALWK K GE
Sbjct: 132 FAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFALWKGKKEGEIG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS A + +Y
Sbjct: 192 WDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQSEARSSHTFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+NYS L+ A
Sbjct: 252 WMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPINYSKDMLNQAK 311
Query: 242 DAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDC--INKLRDEFHARMSDDLNTSHI 298
++ + +++C+ L+ + KT E+ + + + F +M+DDLNT+
Sbjct: 312 SSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVAYLQECKTNFIDKMNDDLNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D +KF N+++++ K QQ L ++ NE+ VL I
Sbjct: 368 ITAIF-DLVKFANTNVSIDSSKVFVQQTLDML-------NELTAVLNI------------ 407
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
DKA + ++ + + +LIE+R A+K+KDF+K+D+IR +L + GI + D +
Sbjct: 408 ---AMDKADEDVDVAK--IEELIEQRNIAKKSKDFAKADEIRDELKQMGIEIKDTRQGVQ 462
Query: 419 W 419
W
Sbjct: 463 W 463
>gi|210623152|ref|ZP_03293607.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
gi|210153796|gb|EEA84802.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
Length = 420
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/419 (40%), Positives = 242/419 (57%), Gaps = 28/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+++ G +P ++ +Y +EY VD L T P+V+ ++ QI + I ++
Sbjct: 28 KIIKRSHEEGISPEEVAEKYIKEYFVDCDGLGIKRATVHPQVTQNIPQIIEFIQELEEKG 87
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F K YG+LSGQ +++ AG R+ V+ +KR+P DF LWKA K GEP
Sbjct: 88 YAYAVNGDVYFDTRKFEGYGKLSGQNIDDLEAGARIEVNEQKRHPMDFVLWKAKKEGEPG 147
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 148 WDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEARSGKPFAKY 207
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKS GNFFT+R I+++Y +R FL+SAHY+SP+N+S L A
Sbjct: 208 WMHNGYINVNNEKMSKSKGNFFTVRDISKKYDLEIVRFFLLSAHYKSPVNFSDDLLAQAG 267
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y T + LS + G+ A + ++ R +F M DDLNT+ +T
Sbjct: 268 AGLERLYNTKEKLVFTLSHLE--GEMTDAEKALVEELDGFRKKFVEVMDDDLNTADAITA 325
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ + KFIN +++ K+ ++ L+ NE+ VL I + +
Sbjct: 326 IFELS-KFINLNVDENSSKEFAEKCLAEF-------NELTGVLNI------------VNK 365
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
KD ++ + +V LI++R A+KNKDF+K+D IR L GI L D + W+
Sbjct: 366 EKDNSV------DAEVEALIQQRTDAKKNKDFAKADAIRQQLLDMGIVLEDTRQGVKWK 418
>gi|410447884|ref|ZP_11301976.1| cysteine--tRNA ligase [SAR86 cluster bacterium SAR86E]
gi|409979464|gb|EKO36226.1| cysteine--tRNA ligase [SAR86 cluster bacterium SAR86E]
Length = 426
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/420 (44%), Positives = 241/420 (57%), Gaps = 40/420 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ E +L+ R D A L PT++PR +DH+E + MI +I+
Sbjct: 44 KIIERANENKETIDALTGRTIASMQEDFAMLGLELPTHEPRATDHIEGMIKMIGTLIDKG 103
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDVFFAV P YG+LS + +++ G R+A D K++P DF LWK+AK EP
Sbjct: 104 HAYHSAGGDVFFAVRTFPEYGKLSNKNIDDLNPGSRIAEDESKKDPLDFVLWKSAKPNEP 163
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWGPGRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS A +
Sbjct: 164 SWDSPWGPGRPGWHIECSVMSLENLGKHFDIHGGGPDLLFPHHENEIAQSECASDHKFAN 223
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G + N EKMSKSLGNF ++ + YHP +R++LIS+HY+S LN+ LD A
Sbjct: 224 YWMHSGLLKINGEKMSKSLGNFAMLKDLFVSYHPEVIRYYLISSHYKSSLNFDSDSLDQA 283
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +YQ +L P QE + ED + D M+DDLNT L+
Sbjct: 284 RSALTRLYQA-----ASLVPLQE-------SDLHEDSVKGFIDS----MNDDLNTPEALS 327
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A K INS+ Q Q Q S+ S +KE+ ++LGLL SE
Sbjct: 328 ILFGLA-KSINST-------QDAQDQ-SMYAS------TMKELGKVLGLLNDS--SEAFL 370
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q A+LT+E++ Q IEER AR NKDF K+DQIR +L +GI L D T W+
Sbjct: 371 QYG------ADLTDEEISQKIEERNQARNNKDFLKADQIRDELVSQGILLDDSSDGTSWK 424
>gi|223478067|ref|YP_002582621.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
gi|214033293|gb|EEB74120.1| Cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
Length = 476
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 246/425 (57%), Gaps = 32/425 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+P L+ R+ + +L DM L+ P PRV++HM++I + + ++
Sbjct: 74 KIIKRANETGEDPKELAERFLRIFLEDMKALKVKPADVYPRVTEHMDEIINFVKKLEEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V K +YG+LS +LE+ G RV KRNP DFALWK AK GEP
Sbjct: 134 YAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEGKRNPEDFALWKKAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 194 WESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVHY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + N EKMSKSLGNF T+R++ +RY P +R F++ HYRSPL+YS ++ A
Sbjct: 254 WMHTGFLMVNGEKMSKSLGNFVTVRELLKRYDPEVIRLFVLQRHYRSPLDYSEEGIEHAK 313
Query: 242 DAVFYIYQTLQDCEVALS----PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
+ + +Y TL++ VA+ F+ R+ A D R +F+ M DD NT+
Sbjct: 314 NNLERLYNTLENIRVAMGRAEISFRWDEPEFRVYEAIRDA----RRKFYEAMDDDFNTAE 369
Query: 298 ILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
L F+ +++++N + + + PK+ LRK ++V + GL +
Sbjct: 370 ALKAVFE-----VSNAINRYLTEVETPKES------ILRKAWEFFRDVGEVFGL-----F 413
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
+ ++ +RA E + LIE RA RK + F +D+IR +L + GI L D +
Sbjct: 414 EDYFKE------QRAGNEEALIDLLIEVRAQLRKERKFDLADRIRDELRKLGIQLEDTPQ 467
Query: 416 ETIWR 420
T+W+
Sbjct: 468 GTVWK 472
>gi|423080651|ref|ZP_17069270.1| cysteine--tRNA ligase [Clostridium difficile 002-P50-2011]
gi|423085098|ref|ZP_17073555.1| cysteine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357550746|gb|EHJ32555.1| cysteine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357552715|gb|EHJ34482.1| cysteine--tRNA ligase [Clostridium difficile 002-P50-2011]
Length = 467
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 246/420 (58%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+++ G +P ++ +Y +EY VD L T P+V+D+++QI + I ++ +
Sbjct: 74 KIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIEFIKELEDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF LWKA K GEP
Sbjct: 134 YAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPG 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEARSGKTFSKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+N+S L+ A
Sbjct: 254 WMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNFSDEMLNQAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTAR-INPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y T + E LS E T + I E ++ R +F M DD+NT+ ++
Sbjct: 314 AGLERLYNTKEKLEFTLSNLVESPLTEKEIELVKE--LDNFRQKFIDAMDDDVNTADAVS 371
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A K INS+++ + S +E +K +E E+ +L ++
Sbjct: 372 VIFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN---------IVN 411
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ KD L ++D+ +LI++R A+KNK+F +D IR L GI L D + W+
Sbjct: 412 KKKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGVKWK 465
>gi|390950398|ref|YP_006414157.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
gi|390426967|gb|AFL74032.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
Length = 462
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/420 (42%), Positives = 244/420 (58%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE +L+ R+ Q D L LPPT +PR + HM+ I DMI +I+
Sbjct: 73 KIIRRAAENGEPFPALTERFIQAMHEDSETLGILPPTDEPRATAHMDDILDMIQTLIDKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV++AV + P+YG+LSG+ ++ R+G RV + KR+P DFALWKAAK EP
Sbjct: 133 FAYVADNGDVYYAVSRFPDYGKLSGKNPQDLRSGARVEIGEAKRDPLDFALWKAAKPDEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS A + V+
Sbjct: 193 AWDSPWGAGRPGWHIECSAMSTCALGNHFDIHGGGADLQFPHHENEIAQSEGATGEPFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V N EKMSKSLGNFFT+R+I +RY P +R+F++++ YRSPLNY L +A
Sbjct: 253 VWMHNGFVRVNEEKMSKSLGNFFTVREILQRYRPEEIRYFILTSQYRSPLNYDDEHLQNA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ + P + R+ FHA M DD NT L
Sbjct: 313 RSALTRFYTALRGL-------------PSVEPVGGET---FRERFHAAMDDDFNTPEALA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + +N ++ +E + E++ + +LG+L + +
Sbjct: 357 VLFD-----LAREINRVRADD--------LERAAALGAELRRMGEVLGILQ----DDAER 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ A L D+ LI +R AAR K+++++D+IRA LT GI L D + TIWR
Sbjct: 400 YLRGDATA-GGLANADIDDLIAQRIAARAAKNWAEADRIRAVLTEAGIVLEDNPQGTIWR 458
>gi|383457378|ref|YP_005371367.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
gi|380732503|gb|AFE08505.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
Length = 489
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/426 (41%), Positives = 245/426 (57%), Gaps = 26/426 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A++ GE P+ L++R+ + + D L P PRVS+ + +I +I +++
Sbjct: 77 KIIKAAHETGEAPVDLASRFVEAFREDARALHLREPDVSPRVSETIPEIVAIIQTLVDKG 136
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+FAV+K +Y +LS + L++ GERV KR P DFALWKAAK GEPS
Sbjct: 137 YAYEAKGDVYFAVDKDEDYAKLSKRNLDDLCQGERVQPGDLKRQPLDFALWKAAKPGEPS 196
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMS +L FDIHGG +DLIFPHHENEIAQS +A + Y
Sbjct: 197 WDSPWGKGRPGWHIECSAMSEKFLGRTFDIHGGALDLIFPHHENEIAQSESATGQTMAKY 256
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + KMSKSLGN +R + ALR F +S HYR PLN+ L A
Sbjct: 257 WMHCGFLDLEGAKMSKSLGNVVRLRDALAKVDAEALRFFFLSTHYRHPLNFGEKALQDAE 316
Query: 242 DAVFYIYQTLQ--DCEVALSPFQE---HGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
+ Y Y+TL+ D VA F + HG+ AR EF + M DD NT+
Sbjct: 317 GRMEYFYETLRKVDERVAGKDFGKGPLHGEPAR-----------FLTEFESAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGA 354
L GA F+N L K P + + + +L+ + +V+E R+LGL PGA
Sbjct: 366 GAL-GALSGLFGFMNE----LTDKPPVKDKPLVGRTLQALREQVRETSRVLGLFEDDPGA 420
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ L + +D+A++ + +V +L+ ER AAR KDF+K+DQ+R L G+ +MD
Sbjct: 421 W---LLRRRDRAVRERGIDVAEVERLLAERTAARAAKDFAKADQVRGALKTLGVDIMDTP 477
Query: 415 KETIWR 420
T W+
Sbjct: 478 AGTSWK 483
>gi|402838090|ref|ZP_10886604.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
gi|402273799|gb|EJU22990.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
Length = 466
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 252/421 (59%), Gaps = 32/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN+ G P+ L+++Y +EY D + T PRV++++++I D I +I+
Sbjct: 72 KIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEIIDFIQDLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFALWK K GE
Sbjct: 132 FAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFALWKGKKEGEIG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS A + +Y
Sbjct: 192 WDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQSEARSSHTFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+NYS L+ A
Sbjct: 252 WMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPINYSKDMLNQAK 311
Query: 242 DAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDC--INKLRDEFHARMSDDLNTSHI 298
++ + +++C+ L+ + KT E+ + + + F +M+DDLNT+
Sbjct: 312 SSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVAYLQECKTNFIDKMNDDLNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D +KF N+++++ K QQ L ++ NE+ VL I
Sbjct: 368 ITAIF-DLVKFANTNVSIDSSKVFVQQTLDML-------NELTGVLNI------------ 407
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
DKA + ++ + + +LIE+R A+K+KDF+K+D+IR +L + GI + D +
Sbjct: 408 ---AMDKADEDVDVAK--IEELIEQRNIAKKSKDFAKADEIRDELKQMGIEIKDTRQGVQ 462
Query: 419 W 419
W
Sbjct: 463 W 463
>gi|255099211|ref|ZP_05328188.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-63q42]
gi|255304994|ref|ZP_05349166.1| cysteinyl-tRNA synthetase [Clostridium difficile ATCC 43255]
gi|400927240|ref|YP_001086515.2| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile 630]
gi|347595718|sp|Q18CD5.2|SYC_CLOD6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|328887507|emb|CAJ66866.2| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile 630]
Length = 465
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 246/419 (58%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+++ G +P ++ +Y +EY VD L T P+V+D+++QI + I ++ +
Sbjct: 72 KIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIEFIKELEDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF LWKA K GEP
Sbjct: 132 YAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 192 WDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEARSGKTFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+N+S L+ A
Sbjct: 252 WMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNFSDEMLNQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y T + E LS E T + ++ ++ R +F M DD+NT+ ++
Sbjct: 312 AGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDAMDDDVNTADAVSV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A K INS+++ + S +E +K +E E+ +L ++ +
Sbjct: 371 IFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN---------IVNK 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
KD L ++D+ +LI++R A+KNK+F +D IR L GI L D + W+
Sbjct: 411 KKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGVKWK 463
>gi|350552639|ref|ZP_08921836.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
gi|349793570|gb|EGZ47402.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
Length = 466
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 237/420 (56%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA E L+ R+ D L LPPT++PR + H++ I MI Q++
Sbjct: 73 KIIQRAAQNHEPIEQLTERFIAAMHEDAQALNILPPTHEPRATQHIQPILHMIEQLLAKG 132
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY D+++AV +YG+LSG++LE+ RAG RV D KR+P DF LWK AK GEP
Sbjct: 133 HAYQASNQDIYYAVNSFKDYGKLSGRQLEDLRAGARVEPDEAKRDPLDFVLWKRAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAMS YL FDIHGGG DL FPHHENEIAQS A+ + V+
Sbjct: 193 SWDSPWGLGRPGWHIECSAMSGSYLGQHFDIHGGGQDLQFPHHENEIAQSEASHDCTYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N EKMSKSLGNFFT+R+I RY +R+F++ +HY+SPLNY QL+ A
Sbjct: 253 YWMHNGFVRVNEEKMSKSLGNFFTVREILARYQAEEVRYFILGSHYKSPLNYGDEQLEQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+A+ +Y L+ + + + +D R FHA M DD NT L
Sbjct: 313 RNALTRLYTALRGLD----------RQPPTTQSEQDQTQAYRQRFHAAMDDDFNTPEALA 362
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N ++ + P Q L +L ++ ILGLL S +
Sbjct: 363 VLFE-----LAHEINRVRSQDPAYAQY-LAATLYQLGG-------ILGLLTQDPQSYLQS 409
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ +++ LI +R AR +KD+ ++D+IR L +GI L D G T WR
Sbjct: 410 GSGSDTIDASQIET-----LIAQRLQARADKDWPEADRIRDHLKTQGIILEDSGNTTTWR 464
>gi|50084652|ref|YP_046162.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|61216194|sp|Q6FC71.1|SYC_ACIAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49530628|emb|CAG68340.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 473
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 253/423 (59%), Gaps = 31/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E L++R+ D A L C P P+ ++++ ++++MI+ +++
Sbjct: 75 KIIKRANENNETIQQLTSRFIDAMNEDAAKLGCAEPDEAPKATEYIGEMQNMISTLVDKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++LE+ +AG ERV ++ K++P DF LWK AK
Sbjct: 135 SAYPASNGDVYFEVSKFEKYGRLSGRKLEDMQAGASERVDIEVEKKHPFDFVLWKGAKPN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS A+ +
Sbjct: 195 EPSWVSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLTFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + E Q +G+ + +D + + F+ M DD NT
Sbjct: 315 EAKTALTRFYHAFKAYE------QVYGQN---DSTQKD--EQFIERFNIAMRDDFNTPEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K+Q +Q +LR + +ILGL+ +V
Sbjct: 364 IAVLFE-----LNRELNRAVKEQQAEQAAIYYVTLRHL-------TQILGLVQ----HDV 407
Query: 359 LQQLK-DKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ LK D + L+++++ +I++RA A+K KDFS +D IR L +G+ L D + T
Sbjct: 408 DEFLKSDIGQEVLSLSDDEIQAMIQQRADAKKAKDFSGADAIRQALLDQGVVLEDTRQGT 467
Query: 418 IWR 420
+WR
Sbjct: 468 LWR 470
>gi|363891501|ref|ZP_09318680.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
gi|361965558|gb|EHL18540.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
Length = 466
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 252/421 (59%), Gaps = 32/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN+ G P+ L+++Y +EY D + T PRV++++++I D I +I+
Sbjct: 72 KIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEIIDFIQDLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFALWK K GE
Sbjct: 132 FAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFALWKGKKEGEIG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS A + +Y
Sbjct: 192 WDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQSEARSSHTFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+NYS L+ A
Sbjct: 252 WMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPINYSKDMLNQAK 311
Query: 242 DAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCI--NKLRDEFHARMSDDLNTSHI 298
+++ + +++C+ L+ + KT E+ + + + F +M+DDLNT+
Sbjct: 312 NSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVVYLQECKTNFIDKMNDDLNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D +KF N+++++ K QQ L ++ NE+ VL I
Sbjct: 368 ITAIF-DLVKFANTNVSIDSSKVFVQQTLDML-------NELTGVLNI------------ 407
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
DK + ++ + + +LIE+R A+K+KDF+K+D+IR +L + GI + D +
Sbjct: 408 ---AMDKTDEDVDVAK--IEELIEQRNIAKKSKDFAKADEIRDELKQMGIEIKDTRQGVQ 462
Query: 419 W 419
W
Sbjct: 463 W 463
>gi|389852533|ref|YP_006354767.1| cysteinyl-tRNA synthetase [Pyrococcus sp. ST04]
gi|388249839|gb|AFK22692.1| cysteinyl-tRNA synthetase [Pyrococcus sp. ST04]
Length = 451
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 242/422 (57%), Gaps = 26/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ GE+P L+ ++ + +L DM L+ P PRV++H+E I I ++I
Sbjct: 49 KIIRRANETGEDPKELAEKFIKVFLEDMRALKVKPADIYPRVTEHIEDIIRFIEKLIEKG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V+K YG+LSG ++E R G RV K+NP DFALWK AK GEP
Sbjct: 109 YAYEGSDGVYFEVQKFSEYGKLSGIKIEELRKGARVEPGEGKKNPEDFALWKKAKPGEPK 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS+ YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 169 WESPWGDGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVRY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V EKMSKSLGNF T+R++ +RY+P +R F++ HYRSPL+Y+ L A
Sbjct: 229 WLHTGFVMVKGEKMSKSLGNFVTVRELLQRYNPEVIRFFVLQKHYRSPLDYTEEGLQHAK 288
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ A+ + A + I + +F+ M DD NT+ L
Sbjct: 289 NNLERLYNTLENIRTAMKEAELSYTWGEEEFEAYEAIKSAKRKFYEAMDDDFNTAEALKA 348
Query: 302 AFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ +++++N + + ++PK+ L + E +I+ SE+
Sbjct: 349 VFE-----VSNAINRYLTEVERPKESVL----------RKAWEFFKIV--------SEIF 385
Query: 360 QQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+D + EE +++ L+E R+ RK K + +D+IR +L + GI L D +TI
Sbjct: 386 GIFEDYFKEEKVGEEEKLIELLVEVRSQLRKEKKYDLADKIREELRKLGIQLEDKKDKTI 445
Query: 419 WR 420
W+
Sbjct: 446 WK 447
>gi|296449821|ref|ZP_06891588.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296877885|ref|ZP_06901905.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
gi|296261308|gb|EFH08136.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296431082|gb|EFH16909.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
Length = 467
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 246/419 (58%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+++ G +P ++ +Y +EY VD L T P+V+D+++QI + I ++ +
Sbjct: 74 KIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIEFIKELEDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF LWKA K GEP
Sbjct: 134 YAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPG 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEARSGKTFSKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+N+S L+ A
Sbjct: 254 WMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNFSDEMLNQAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y T + E LS E T + ++ ++ R +F M DD+NT+ ++
Sbjct: 314 AGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDGFRQKFIDAMDDDVNTADAVSV 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A K INS+++ + S +E +K +E E+ +L ++ +
Sbjct: 373 IFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN---------IVNK 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
KD L ++D+ +LI++R A+KNK+F +D IR L GI L D + W+
Sbjct: 413 KKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGVKWK 465
>gi|310820623|ref|YP_003952981.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|309393695|gb|ADO71154.1| Cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 488
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 245/424 (57%), Gaps = 22/424 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A++ GE P++L+ R+ + + D L + P P+VS+H+ +I +I ++
Sbjct: 77 KIIKAAHETGEEPVALAGRFVKIFQDDTRALHLVEPDVAPKVSEHLPEILRIIETLVAKG 136
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+V P Y +LS ++L++ AGERV +KR P DFALWKAAK GEPS
Sbjct: 137 VAYESQGDVYFSVSSYPEYAKLSKRKLDDLCAGERVQPGEQKREPLDFALWKAAKPGEPS 196
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQS AA Y
Sbjct: 197 WDSPWGKGRPGWHIECSAMSAKYLGESFDIHGGALDLIFPHHENEIAQSEAASGKPFAKY 256
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + KMSKSLGN +R R ALR F +S HYR PL++S + +
Sbjct: 257 WMHCGFLDIEGAKMSKSLGNVVRLRDALTRVDAEALRFFFLSTHYRHPLHFSDKAIADSE 316
Query: 242 DAVFYIYQTLQ--DCEVALSPFQE---HGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
+ Y Y+TL+ D V F + HG+ R EF A M DD N
Sbjct: 317 YRLEYFYETLRKVDERVGGKDFGQGPLHGEPGR-----------FLQEFEAAMDDDFNCP 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
L AL + +N L K P + + + +L+ + + V++V +LGL
Sbjct: 366 GAL-----GALSGLFGLMNELTDKPPVKDKALVGRTLQALRDTVRKVSSVLGLFEDDPTQ 420
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L++ +D+A+K + V +L+ ER ARK+K+F+++D++R++L +G+ +MD
Sbjct: 421 WLLRR-RDRAVKERGIDVAQVERLLSERNEARKSKNFAEADRLRSELKGQGVEIMDTVAG 479
Query: 417 TIWR 420
T W+
Sbjct: 480 TSWK 483
>gi|255654140|ref|ZP_05399549.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-23m63]
Length = 465
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 246/419 (58%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+++ G +P ++ +Y +EY VD L T P+V+D+++QI + I ++ +
Sbjct: 72 KIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIEFIKELEDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF LWKA K GEP
Sbjct: 132 YAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 192 WDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEARSGKTFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+N+S L+ A
Sbjct: 252 WMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNFSDEMLNQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y T + E LS E T + ++ ++ R +F M DD+NT+ ++
Sbjct: 312 AGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDGFRQKFIDAMDDDVNTADAVSV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A K INS+++ + S +E +K +E E+ +L ++ +
Sbjct: 371 IFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN---------IVNK 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
KD L ++D+ +LI++R A+KNK+F +D IR L GI L D + W+
Sbjct: 411 KKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGVKWK 463
>gi|302039377|ref|YP_003799699.1| cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
gi|300607441|emb|CBK43774.1| Cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
Length = 486
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 249/425 (58%), Gaps = 35/425 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G + ++ Y Y DM L T +PR ++H+ +I ++ ++
Sbjct: 73 KIIKRAKEQGVSCEHVTTTYINAYYEDMEKLGVRRATLEPRATEHIAEIVRLVDTLLAKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F V++ YGRLS + +++ +AG RV VD RKR+P DFALWK +K GEPS
Sbjct: 133 MAYRVDGDVYFQVDRYAVYGRLSKRNVDDLQAGARVDVDERKRHPMDFALWKGSKPGEPS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ +L FDIHGGG+DLIFPHHENEIAQSC A Y
Sbjct: 193 WDSPWGQGRPGWHIECSAMAMRHLGETFDIHGGGMDLIFPHHENEIAQSCGATGKEFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYH------PLALRHFLISAHYRSPLNYSVL 235
W+HNG V N EKMSKSLGNFFTIR+I ++ LR+FL++ HYRSPL++S
Sbjct: 253 WVHNGFVQINQEKMSKSLGNFFTIREIFQKSEWPDTVTGEMLRYFLLTTHYRSPLDFSDQ 312
Query: 236 QLDSASDAV--FY-IYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDD 292
L A +A+ FY +++ L + SP + + ++ + + R+ F A M DD
Sbjct: 313 SLKEAKNALNGFYDLFERLNESAPVHSPGDQ---------SMQEAMVRTREAFVAAMDDD 363
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK-IENEVKEVLRILGLLP 351
LNT + L ++L ML+ K + L +R+ + E + + +LGLL
Sbjct: 364 LNTPNAL------------AALQMLRGDTNKALEAGLSGEMRQMVRQEFRALGIVLGLLQ 411
Query: 352 PGAYSEVLQQLKDKA----LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 407
+ +QQ + + L++ED+ + R AA+++K++ +DQ+RA+L G
Sbjct: 412 TDTWRFKIQQQQPSSGGAEASTGTLSDEDIADKLAARLAAKRSKNYQLADQLRAELASHG 471
Query: 408 IALMD 412
I + D
Sbjct: 472 ITIED 476
>gi|423089340|ref|ZP_17077700.1| cysteine--tRNA ligase [Clostridium difficile 70-100-2010]
gi|357558276|gb|EHJ39775.1| cysteine--tRNA ligase [Clostridium difficile 70-100-2010]
Length = 467
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 246/419 (58%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+++ G +P ++ +Y +EY VD L T P+V+D+++QI + I ++ +
Sbjct: 74 KIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIEFIKELEDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF LWKA K GEP
Sbjct: 134 YAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPG 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEARSGKTFSKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+N+S L+ A
Sbjct: 254 WMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNFSDEMLNQAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y T + E LS E T + ++ ++ R +F M DD+NT+ ++
Sbjct: 314 AGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDAMDDDVNTADAVSV 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A K INS+++ + S +E +K +E E+ +L ++ +
Sbjct: 373 IFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN---------IVNK 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
KD L ++D+ +LI++R A+KNK+F +D IR L GI L D + W+
Sbjct: 413 KKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGVKWK 465
>gi|336323676|ref|YP_004603643.1| cysteinyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
gi|336107257|gb|AEI15075.1| cysteinyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
Length = 477
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 252/424 (59%), Gaps = 29/424 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II ++ + G + ++ +Y +E+ DM L P Y+P+ +D+++ + ++ +++I
Sbjct: 73 KIINKSKETGISWKEITEKYIREHDYDMNKLNVKKPDYEPKATDYIDDMIELCSKLIEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F V+ YG+LS + +E +AG R+ + K +P DFALWK +K GEP
Sbjct: 133 NAYEIDGDVYFRVKSFQEYGKLSNRDIEELKAGTRIELRDNKEDPLDFALWKKSKEGEPG 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS+ L FDIHGGG DLIFPHHENEIAQS A+C Y
Sbjct: 193 WESPWGKGRPGWHIECSVMSSKILGLPFDIHGGGKDLIFPHHENEIAQSEASCGCQFAKY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V N EKMSKSLGNFFTIR I E + P +LR+FL++ HYRSPL++S +L A
Sbjct: 253 WMHNGFVNINKEKMSKSLGNFFTIRDIIEEFEPESLRYFLLTTHYRSPLDFSEDKLIEAE 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTSH 297
A+ IY TL D V K R D +N +++ F M DD NT+
Sbjct: 313 SALDRIY-TLIDSMVTY-------KAGRKGKNLLDEVNSIKEHFEKDFIEAMDDDFNTAA 364
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR-ILGLLPPGAYS 356
L+ F+ K +N+L + +P ++ +SL+ N++ E++R LG+
Sbjct: 365 ALSVIFEYIRK-----MNVLLENKPDKESF---KSLKNQFNDILEIVRSTLGI------- 409
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ +D + E+++ + I +R RKNK+F K+D+IR +L +KG+ L+D +
Sbjct: 410 -AAKTPEDWFRANLSIPEKELFEKINQRNEYRKNKEFDKADKIRDELEKKGVELLDTPEG 468
Query: 417 TIWR 420
T +R
Sbjct: 469 TKYR 472
>gi|115378641|ref|ZP_01465792.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|115364353|gb|EAU63437.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 458
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 245/424 (57%), Gaps = 22/424 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A++ GE P++L+ R+ + + D L + P P+VS+H+ +I +I ++
Sbjct: 47 KIIKAAHETGEEPVALAGRFVKIFQDDTRALHLVEPDVAPKVSEHLPEILRIIETLVAKG 106
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+V P Y +LS ++L++ AGERV +KR P DFALWKAAK GEPS
Sbjct: 107 VAYESQGDVYFSVSSYPEYAKLSKRKLDDLCAGERVQPGEQKREPLDFALWKAAKPGEPS 166
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQS AA Y
Sbjct: 167 WDSPWGKGRPGWHIECSAMSAKYLGESFDIHGGALDLIFPHHENEIAQSEAASGKPFAKY 226
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + KMSKSLGN +R R ALR F +S HYR PL++S + +
Sbjct: 227 WMHCGFLDIEGAKMSKSLGNVVRLRDALTRVDAEALRFFFLSTHYRHPLHFSDKAIADSE 286
Query: 242 DAVFYIYQTLQ--DCEVALSPFQE---HGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
+ Y Y+TL+ D V F + HG+ R EF A M DD N
Sbjct: 287 YRLEYFYETLRKVDERVGGKDFGQGPLHGEPGR-----------FLQEFEAAMDDDFNCP 335
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
L AL + +N L K P + + + +L+ + + V++V +LGL
Sbjct: 336 GALG-----ALSGLFGLMNELTDKPPVKDKALVGRTLQALRDTVRKVSSVLGLFEDDPTQ 390
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L++ +D+A+K + V +L+ ER ARK+K+F+++D++R++L +G+ +MD
Sbjct: 391 WLLRR-RDRAVKERGIDVAQVERLLSERNEARKSKNFAEADRLRSELKGQGVEIMDTVAG 449
Query: 417 TIWR 420
T W+
Sbjct: 450 TSWK 453
>gi|363890596|ref|ZP_09317922.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
gi|361964885|gb|EHL17890.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
Length = 466
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 251/421 (59%), Gaps = 32/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN+ G P+ L+++Y +EY D + T PRV++++++I D I +I+
Sbjct: 72 KIIIKANEEGITPIQLADKYIEEYFKDAKAIGIRKATVHPRVTENIKEIIDFIQDLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ DV+F V+K YG+LS + +++ +G R+ ++ KR P DFALWK K GE
Sbjct: 132 FAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARIEINDEKRAPIDFALWKGKKEGEIG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS A + +Y
Sbjct: 192 WDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQDLIFPHHENEIAQSEARSSHTFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNFFT+R + + + LR F++SAHYRSP+NYS L+ A
Sbjct: 252 WMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTLRFFMLSAHYRSPINYSKDMLNQAK 311
Query: 242 DAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDC--INKLRDEFHARMSDDLNTSHI 298
++ + +++C+ L+ + KT E+ + + + F +M+DDLNT+
Sbjct: 312 SSL----ERIKNCKNNLNFILTKIDKTDMSEQEKENVAYLQECKTNFIDKMNDDLNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D +KF N+++++ K QQ L ++ NE+ VL I
Sbjct: 368 ITAIF-DLVKFANTNVSIDSSKVFVQQTLDML-------NELTGVLNI------------ 407
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
DKA + ++ + + +LIE+R A+K+KDF+K+D IR +L + GI + D +
Sbjct: 408 ---AMDKADEDVDVAK--IEELIEQRNIAKKSKDFAKADTIRDELKQMGIEIKDTRQGVQ 462
Query: 419 W 419
W
Sbjct: 463 W 463
>gi|226951456|ref|ZP_03821920.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226837804|gb|EEH70187.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 473
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 255/422 (60%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ L+ R+ D ADL C+ P P+ +++++Q+++MI+ ++N
Sbjct: 75 KIIARANENGESIQQLTARFIDAMNEDAADLGCVAPDEAPKATEYIDQMQNMISTLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A +
Sbjct: 195 EPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEATTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + + +Q+ ++ + + + F+ M DD NT+
Sbjct: 315 EAKTALSRFYHSFK-------AYQQVYGQKTVDALEQSFVER----FNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ +Q + L +LR++ N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQAEQAMVLYSTLRQLTN-------ILGLVQHNVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ D+ LI++R A+K KDF+K+D IR L +G+ L D + TI
Sbjct: 412 KSDIGQDALA---LSDTDIEDLIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQGTI 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|15606347|ref|NP_213726.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6831683|sp|O67163.1|SYC_AQUAE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|2983551|gb|AAC07125.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 495
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 169/425 (39%), Positives = 252/425 (59%), Gaps = 14/425 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + +++++RY Y VDM +++ P +PRV++H+ +I ++I +++
Sbjct: 74 KIINRAKQECTDFMTIADRYIARYYVDMENIRVRPADVEPRVTEHIPEIIEVIQKLVEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVVEGDV+F+V+K +YG+LS + +E AG RV +KR+P DFALWKA+KAGEP+
Sbjct: 134 YAYVVEGDVYFSVKKFKDYGKLSKRDIEELIAGARVEPSEKKRDPLDFALWKASKAGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWH EC AM +L DIHGGG+DL+FPHHENEIAQ+ A Y
Sbjct: 194 WDSPWGKGRPGWHTECVAMVFKHLGETIDIHGGGLDLVFPHHENEIAQAEAITGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG VT +KMSKSLGN+ T+R++ +YHP LR ++ HYRSPL++S +++
Sbjct: 254 WMHNGLVTVGGQKMSKSLGNYVTLREVYTKYHPDVLRLLVLFTHYRSPLDFSWEKMEETL 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A + ++D E+ K +P E + + + F+A +SDD NT L+
Sbjct: 314 KAYERLKNAIEDLELLKKLQVVESKEGGTHPLYEQ-VKEFEENFYASLSDDFNTPEALSH 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL----RILGLLPPGAYSE 357
++ + LN +K K + +++ E L E K +L +I GLL Y E
Sbjct: 373 VYK-----LVGELNKVKNKAYSEGKITDRE-LSAYEFASKSLLNTMKKIFGLL-EDLYPE 425
Query: 358 V-LQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
++++ ++ L+ ++ +E ++Q LIE R ARK K F +D IR L GI L D
Sbjct: 426 CKVERVVERELEAGQVFDEKLIQILIEARNIARKEKVFKVADYIRDKLKELGIVLEDTPA 485
Query: 416 ETIWR 420
T W+
Sbjct: 486 GTKWK 490
>gi|326795514|ref|YP_004313334.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
gi|326546278|gb|ADZ91498.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
Length = 461
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 178/419 (42%), Positives = 246/419 (58%), Gaps = 34/419 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE P L+ R + D L LPP +P+ ++ M++I +MI +++
Sbjct: 73 KIIKRAAENGELPSDLTERMIEAQQEDEKALGNLPPDREPKATEFMQEIINMIKTLVDKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDVF+ + +YG+L+ ++LE AG RV V K +PADF LWK K GE
Sbjct: 133 FAYQSDSGDVFYRASRFTDYGKLNNRKLEEMLAGARVEVTESKEHPADFVLWKPVKEGEV 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
WDSPWG GRPGWHIECSAMS + L FDIHGGG DL FPHHENEIAQS AA V+
Sbjct: 193 HWDSPWGKGRPGWHIECSAMSTNCLGDHFDIHGGGPDLKFPHHENEIAQSEAATGKDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V NNEKMSKSLGNFFTIR++ + Y+P LR+ ++S+HYRSP++YS L+ A
Sbjct: 253 YWMHCGAVRVNNEKMSKSLGNFFTIREVLKLYNPEVLRYLMVSSHYRSPIDYSDQSLNDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D ++ P + D R F A ++DD NT L+
Sbjct: 313 KVALERLYNALRD------------QSCSEIPESSD----YRTRFTAALNDDFNTPVALS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N + K + L E+L E+ + +LGLL Y +
Sbjct: 357 VLF-DLVRDLN---------KAKTESAELAETLAA---ELTNLASVLGLL----YQDADY 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
LK+ ++ +D+ +LIEER ARK+K+FS+SD+IR L KGI L+D + T W
Sbjct: 400 FLKNGTFDAEGISADDIEKLIEERKQARKDKNFSRSDEIRDLLAEKGIELLDSREGTSW 458
>gi|284919700|emb|CAX65477.1| hypothetical protein [Enterobacter hormaechei]
Length = 480
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 243/420 (57%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA D GE+ SL+ R E +D A L LPP +PR ++H+ QI MI ++++
Sbjct: 93 KIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQIISMIERLLHRQ 152
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR+P DF LWK AK GEP
Sbjct: 153 FAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEP 212
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHENEIAQS +A V+
Sbjct: 213 VWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQSTSANDGPYVN 272
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SAHYR PLNYS + A
Sbjct: 273 YWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSAHYRKPLNYSEENIHLA 332
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y Q + + S ++H + R F M DD NT L
Sbjct: 333 RASLTRLYTACQFADGSRS--EQH--------------DAWRARFCEAMDDDFNTPQALA 376
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L + +L +L+ + N +LGLL A L+
Sbjct: 377 ILFE-----LTREINRLCGTNDDEAA-ALATTLKDLGN-------VLGLLEQSA-DAFLK 422
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D L AEL + + +LI +R+ AR+ + K+D++R +L +GI L D+G+ T WR
Sbjct: 423 NRSD--LHPAEL--QLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVGENTSWR 478
>gi|403675335|ref|ZP_10937514.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 10304]
Length = 473
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 252/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR +TE++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVTEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|157145196|ref|YP_001452515.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|425075962|ref|ZP_18479065.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425086595|ref|ZP_18489688.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|444350682|ref|YP_007386826.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
gi|157082401|gb|ABV12079.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|204636645|gb|ACI01739.1| putative cysteinyl-tRNA synthetase class Ia [Escherichia coli]
gi|405593466|gb|EKB66907.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405603319|gb|EKB76440.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|443901512|emb|CCG29286.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
Length = 460
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 243/420 (57%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA D GE+ SL+ R E +D A L LPP +PR ++H+ QI MI ++++
Sbjct: 73 KIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQIISMIERLLHRQ 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR+P DF LWK AK GEP
Sbjct: 133 FAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHENEIAQS +A V+
Sbjct: 193 VWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQSTSANDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SAHYR PLNYS + A
Sbjct: 253 YWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSAHYRKPLNYSEENIHLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y Q + + S ++H + R F M DD NT L
Sbjct: 313 RASLTRLYTACQFADGSRS--EQH--------------DAWRARFCEAMDDDFNTPQALA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L + +L +L+ + N +LGLL A L+
Sbjct: 357 ILFE-----LTREINRLCGTN-DDEAAALATTLKDLGN-------VLGLLEQSA-DAFLK 402
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D L AEL + + +LI +R+ AR+ + K+D++R +L +GI L D+G+ T WR
Sbjct: 403 NRSD--LHPAEL--QLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVGENTSWR 458
>gi|410658554|ref|YP_006910925.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|410661541|ref|YP_006913912.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. CF]
gi|409020909|gb|AFV02940.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|409023897|gb|AFV05927.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. CF]
Length = 487
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 249/430 (57%), Gaps = 31/430 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G +P++L+ +Y EY D L LP P+ ++H+ ++ D+I ++
Sbjct: 74 KIINRAAEEGCDPIALAGKYINEYFTDAKALNILPADIHPKATEHIPEMIDIIRRLEEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+FAV+K P YG+LSG+ LE+ +AG RV VD +K NP DFALWK AKAGEP
Sbjct: 134 LAYNIDGDVYFAVDKFPGYGKLSGRTLEDMQAGARVEVDDKKHNPMDFALWKKAKAGEPF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W+SPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENEIAQS + +
Sbjct: 194 WESPWGKGRPGWHIECSAMSLKYLGPGFDIHGGGGDLVFPHHENEIAQSEGCLEGQQFAR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N EKMSKSLGNFF +R +T ++ +R +L+ HYRSPL++ +L A
Sbjct: 254 YWMHNAFITINQEKMSKSLGNFFLVRDVTGKFPGDVIRFYLLGTHYRSPLDFDDEKLVMA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQ-EHGKTARI----------NPAAEDCINKLRDEFHARM 289
S + + +++ + AL Q + G T I N A+ C+ + R+ F M
Sbjct: 314 SKGLDRLKNSVRLAKEALGKAQGKEGMTFGIIAVNRDLKTDNEMAQACL-EARNAFEQAM 372
Query: 290 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL 349
DD N++ F+ A K IN+ L + ESL + + E+ ILG
Sbjct: 373 DDDFNSAQAYAALFELA-KGINTYL---------AKGSIETESLTEAAQTLIELAGILG- 421
Query: 350 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 409
A +E+LQ+ K + EL ++E RA AR+NKD++ +D IR + GI
Sbjct: 422 FDLEAEAEMLQEDSGKLAQVMEL-------VMEIRANARRNKDWTTADLIRDRIKEIGIV 474
Query: 410 LMDMGKETIW 419
+ D + W
Sbjct: 475 IEDTPEGARW 484
>gi|375084700|ref|ZP_09731560.1| cysteine-tRNA ligase [Megamonas funiformis YIT 11815]
gi|374567947|gb|EHR39145.1| cysteine-tRNA ligase [Megamonas funiformis YIT 11815]
Length = 474
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/424 (41%), Positives = 239/424 (56%), Gaps = 28/424 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR AN G N +S RY Y M L P+VS + +I DMI+ +I+
Sbjct: 73 KIIRTANQEGVNWSDISTRYINSYFEVMDKLHVKHADIYPKVSQTIPEIIDMISVLIDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY + GDV+F+VEK YG+LSG++LE+ AG R+ V+ K NP DFALWKAAK GEP
Sbjct: 133 YAYELNGDVYFSVEKFKGYGKLSGRKLEDMMAGARIEVNESKHNPMDFALWKAAKPGEPF 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD--SNV 179
W+SPWG GRPGWHIECS MS YL FD HGGG DLIFPHHENEIAQS A C D S
Sbjct: 193 WESPWGNGRPGWHIECSTMSLKYLGKTFDFHGGGSDLIFPHHENEIAQSQAYCGDDHSFA 252
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N EKMSKSLGNFFT+++I ++Y LR F++S HYRSPL++S +LD
Sbjct: 253 RYWLHNGFITINQEKMSKSLGNFFTVKEILDKYPAEVLRFFIVSTHYRSPLDFSDARLDE 312
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHARMSDDLNTS 296
A+ +L + AL +E K + E+ I K + F M DD NT+
Sbjct: 313 AT-------TSLNRLKNALDNLKELAKNTTDATSGEELIAKAKQCKQNFFEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ F D K IN N + + ++++ +L + E+ I+G+L
Sbjct: 366 LAIANMF-DLSKEINIYYNEVTSGKVACSKVAVDTAL----DVFSEMADIIGILE----- 415
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+D L + + +I+ R ARKNKD++ +D+IR +L GI L D
Sbjct: 416 ------EDDNSADDGLVDNLMNLIIDIRQNARKNKDWATADKIRDELKNIGITLEDSPTG 469
Query: 417 TIWR 420
W+
Sbjct: 470 VRWK 473
>gi|421808496|ref|ZP_16244343.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
gi|410415644|gb|EKP67429.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
Length = 473
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEKY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + N EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVNGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSNIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|402779984|ref|YP_006635530.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402540896|gb|AFQ65045.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
Length = 471
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 243/420 (57%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA D GE+ SL+ R E +D A L LPP +PR ++H+ QI MI ++++
Sbjct: 84 KIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQIISMIERLLHRQ 143
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR+P DF LWK AK GEP
Sbjct: 144 FAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEP 203
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHENEIAQS +A V+
Sbjct: 204 VWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQSTSANDGPYVN 263
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SAHYR PLNYS + A
Sbjct: 264 YWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSAHYRKPLNYSEENIHLA 323
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y Q + + S ++H + R F M DD NT L
Sbjct: 324 RASLTRLYTACQFADGSRS--EQH--------------DAWRARFCEAMDDDFNTPQALA 367
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L + +L +L+ + N +LGLL A L+
Sbjct: 368 ILFE-----LTREINRLCGTN-DDEAAALATTLKDLGN-------VLGLLEQSA-DAFLK 413
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D L AEL + + +LI +R+ AR+ + K+D++R +L +GI L D+G+ T WR
Sbjct: 414 NRSD--LHPAEL--QLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVGENTSWR 469
>gi|212223750|ref|YP_002306986.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229558797|sp|B6YUQ3.1|SYC_THEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212008707|gb|ACJ16089.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 476
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/420 (39%), Positives = 241/420 (57%), Gaps = 22/420 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ GE+P L+ ++ + +L DM L+ P PRV++H++ I D + ++
Sbjct: 74 KIIRRANETGEDPKELAEKFLRYFLEDMKALKVKPADIYPRVTEHIQDIIDFVRKLQEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V K +YG+LSG +LE G RV K+NP DFALWK AK GEP
Sbjct: 134 YAYEGNDGVYFEVRKFKDYGKLSGIKLEELVKGARVEPGEGKKNPEDFALWKKAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 194 WESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQSEACTGHEWVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V + EKMSKSLGNF TIR++ ++Y P +R F++ HYRSPL+Y+ + A
Sbjct: 254 WLHTGFVMVSGEKMSKSLGNFVTIRELLQKYSPEVIRFFVLQKHYRSPLDYTEEGIQHAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ VA+ + + + + R +F+ M DD NT+ L
Sbjct: 314 NNLERLYNTLENIRVAMEKADVAFRWDEEEFELYETVREARKKFYDAMDDDFNTAEALKA 373
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ +++++N K K ++ L ++L E +I+ SEV
Sbjct: 374 VFE-----VSNAVNRYLTKVEKPKESVLRKAL--------EFFKIV--------SEVFGL 412
Query: 362 LKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+D ++ EE +++ L+ RA RK ++F+ +D+IR +L GI L D + TIW+
Sbjct: 413 FEDYFKEQKAGDEEALIELLVSVRAELRKQRNFTLADKIRDELKALGIQLEDTPQGTIWK 472
>gi|342216509|ref|ZP_08709156.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587399|gb|EGS30799.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 461
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 247/422 (58%), Gaps = 37/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP-PTYQPRVSDHMEQIKDMITQIINN 60
+II++AN+ G ++ RY +E+ D L T PR +++M++I I +++
Sbjct: 72 KIIKKANEEGLETKEIAERYIEEFKKDAQGLNLYEYKTINPRATEYMDEIIHFIKDLVDK 131
Query: 61 DCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY ++GDV+F + K+ +YG+LSG+ L+ ++G R+ V+ +K+NP DFALWK K GEP
Sbjct: 132 GAAYELDGDVYFDITKAKDYGKLSGKNLDELQSGARIDVNEKKKNPGDFALWKKKKEGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPW GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS A
Sbjct: 192 AWESPWSQGRPGWHIECSVMAKTLLGKTIDIHTGGEDLEFPHHENEIAQSEAHNGQDFAR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+W+HNG +T ++EKMSKS GNFFT+R I++ Y LR FLIS+HYRSP+N+S +D
Sbjct: 252 FWLHNGMITVDHEKMSKSKGNFFTVRDISKEYDLEVLRLFLISSHYRSPINFSKEVMDQN 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTAR--INPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ +Y T E AL K A+ +P + I +L++EF M DD+NT+
Sbjct: 312 KHALERLYNTKDRLEGAL-------KAAKPGSDPNFDQDIQRLKEEFCQAMEDDMNTADA 364
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L+ F D K IN +N +++ L ESL+ + + ++LGLL
Sbjct: 365 LSKLF-DLSKRINQGIN---------EEIGL-ESLKGAQESYLSLAKVLGLL-------- 405
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K + EE+VL+LI+ER ARKNKDF+++D +R L GIA+ D T
Sbjct: 406 --------YKEEDQAEEEVLKLIKEREEARKNKDFARADALRDQLLEMGIAIEDSRDGTK 457
Query: 419 WR 420
W+
Sbjct: 458 WK 459
>gi|254973704|ref|ZP_05270176.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-66c26]
gi|255091094|ref|ZP_05320572.1| cysteinyl-tRNA synthetase [Clostridium difficile CIP 107932]
gi|255312749|ref|ZP_05354332.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-76w55]
gi|255515509|ref|ZP_05383185.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-97b34]
gi|255648602|ref|ZP_05395504.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-37x79]
gi|306518726|ref|ZP_07405073.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-32g58]
gi|384359372|ref|YP_006197224.1| cysteinyl-tRNA synthetase [Clostridium difficile BI1]
Length = 465
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 245/419 (58%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+++ G +P ++ +Y +EY VD L T P+V+D+++QI + I ++ +
Sbjct: 72 KIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIEFIKELEDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF LWKA K GEP
Sbjct: 132 YAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 192 WDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEARSGKIFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+N+S L+ A
Sbjct: 252 WMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNFSDEMLNQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y T + E LS E T + ++ ++ R +F M DD+NT+ ++
Sbjct: 312 AGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDAMDDDVNTADAVSV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A K INS+++ + S +E +K +E E+ +L ++ +
Sbjct: 371 IFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN---------IVNK 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
KD L ++D+ +LI++R A+KNK+F +D IR L GI L D + W+
Sbjct: 411 KKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGVKWK 463
>gi|260681821|ref|YP_003213106.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260685418|ref|YP_003216551.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
gi|260207984|emb|CBA60138.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260211434|emb|CBE01534.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
Length = 467
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 245/419 (58%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+++ G +P ++ +Y +EY VD L T P+V+D+++QI + I ++ +
Sbjct: 74 KIINRSHEEGISPEEVAAKYIKEYFVDCDGLGIKRATVHPQVTDNIQQIIEFIKELEDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F K YG+LSGQ+ E+ AG R+ V+ +KR+P DF LWKA K GEP
Sbjct: 134 YAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQKRHPMDFVLWKAKKEGEPG 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 194 WDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPHHENEIAQSEARSGKIFSKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ N+EKMSKS GNFFT+R I++ Y +R F++SAHYR+P+N+S L+ A
Sbjct: 254 WMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIVRFFMLSAHYRNPVNFSDEMLNQAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y T + E LS E T + ++ ++ R +F M DD+NT+ ++
Sbjct: 314 AGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE-LDDFRQKFIDAMDDDVNTADAVSV 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A K INS+++ + S +E +K +E E+ +L ++ +
Sbjct: 373 IFELA-KLINSNVD----------ENSSLEFAKKCLDEFNELTGVLN---------IVNK 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
KD L ++D+ +LI++R A+KNK+F +D IR L GI L D + W+
Sbjct: 413 KKDTVL------DKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTRQGVKWK 465
>gi|416148465|ref|ZP_11602376.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB210]
gi|333364986|gb|EGK47000.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB210]
Length = 428
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 30 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 89
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 90 AAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 149
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 150 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 209
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 210 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 269
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 270 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEA 318
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 319 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 366
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 367 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 423
Query: 419 WR 420
WR
Sbjct: 424 WR 425
>gi|242280816|ref|YP_002992945.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
gi|259511828|sp|C6BS23.1|SYC_DESAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|242123710|gb|ACS81406.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
Length = 485
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 244/423 (57%), Gaps = 17/423 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ G L+ ++ E+ VDM L L +P+ ++H+ ++ ++ +I D
Sbjct: 72 KIINRANETGVTSTELAEKFIGEFYVDMDKLNILRADIEPKCTEHIPEMIELTQTLIEKD 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V +YG+LSG+ +E+ ++G R+ K++P DFALWKAAK GEP
Sbjct: 132 HAYATPSGDVYFKVRSFDDYGKLSGRNIEDLQSGARIQPGEEKQDPLDFALWKAAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWH+ECSAMS Y FDIHGGG DL FPHHENEIAQS AA
Sbjct: 192 SWESPWGQGRPGWHLECSAMSEKYFELPFDIHGGGQDLSFPHHENEIAQSEAATGKEMAR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+W+HNG V N+EKMSKSLGNFFTIR I +++ P LR+FL++ HYRSPL++S L+ A
Sbjct: 252 FWVHNGFVQINSEKMSKSLGNFFTIRDILDKFMPETLRYFLLTMHYRSPLDFSFEALEEA 311
Query: 241 SDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ +Y L+ AL S + + + ED D M DD+NT+
Sbjct: 312 EKGIRRVYSALEQTAEALNKSKWSKAALPEEVLAEIEDAEKGWADA----MEDDMNTA-- 365
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK--EVLRILGLLPPGAYS 356
GA I + + ++K ++ + +R +E+ K EVL I P
Sbjct: 366 --GAMGHMFTLIRLAGRIGEEKSWRKSEGGRDAWIRILEDMKKWGEVLGIFTRDP----K 419
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
E L++LK L+R + V +L+ R ARKNKDF++SD+IR +L G+ + D +
Sbjct: 420 EFLEELKLCMLERKGIEVAKVEELVAARQEARKNKDFARSDEIRDELIELGVEVKDTPQG 479
Query: 417 TIW 419
+W
Sbjct: 480 AVW 482
>gi|258513619|ref|YP_003189841.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257777324|gb|ACV61218.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 500
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/438 (39%), Positives = 255/438 (58%), Gaps = 31/438 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + +P +L+ +Y +EY +D L + P+VSDHM +I +++ +++
Sbjct: 72 KIIKRAAEEKLDPSALAFKYTEEYYIDATSLNVMMADIHPKVSDHMAEIIELVEKLVQKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F V + +YG+LSG+ LE+ AG RV V+ +KR+P DFALWKAAK GEPS
Sbjct: 132 FAYQSDGDVYFEVRRFKDYGKLSGRALEDMLAGARVEVNEKKRDPMDFALWKAAKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS YL FD+HGGG DLIFPHHENEIAQS AA + Y
Sbjct: 192 WNSPWGQGRPGWHIECSAMSLKYLGENFDMHGGGADLIFPHHENEIAQSEAATGEPLARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY-----SVLQ 236
W+HNG +T N EKMSKSLGNFF +R+I +++ P +R FL+ HYRSPL++ +V++
Sbjct: 252 WLHNGFITVNQEKMSKSLGNFFLVREILDKFSPEVVRFFLLGTHYRSPLDFDDEKLAVVE 311
Query: 237 --LDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP------AAEDCINKLRDEFHAR 288
LD ++ + + Q V S K AR+ ++ K++ F
Sbjct: 312 KGLDRIRTSIQLLGEACQRAGVDFSMINAKEKPARVTSIIDTRHSSMKAFIKIKTSFEQA 371
Query: 289 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES--LRKIENEVKEVLRI 346
M DD NT+ + G+ + K N + L K +Q++ L+++ L K+ N+V
Sbjct: 372 MEDDFNTA-LAVGSLFELAKETNILVQSLGPKISEQEKACLLQAAELFKLFNQVL----- 425
Query: 347 LGLLPPGAYSEVL---QQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRAD 402
G + E L L + + E V+Q L++ R ARKNK+++ SD+IR
Sbjct: 426 ------GIFKEDLCTGYPLVTPVDESGDGMLEAVMQMLLDIRNEARKNKNWALSDRIRDA 479
Query: 403 LTRKGIALMDMGKETIWR 420
L + L D + T W+
Sbjct: 480 LKDINVILEDTPQGTRWK 497
>gi|445492789|ref|ZP_21460635.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
gi|444762993|gb|ELW87339.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
Length = 473
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ ++++EQ+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIEQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 SAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|291287685|ref|YP_003504501.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884845|gb|ADD68545.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 479
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 240/421 (57%), Gaps = 19/421 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+N+ + L+ + E+ DM L L P + P+ +D+++Q+ M +I
Sbjct: 73 KIIKRSNEKQMDWRELAANFIAEHDADMDSLNILRPDHTPKATDYIKQMIQMCETLIEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GD+++ V+K YG+LS ++LE+ AG R+ V +K NP DF LWKA+K GEPS
Sbjct: 133 FAYESNGDIYYRVQKFEEYGKLSHRKLEDMMAGARIEVSVKKENPYDFVLWKASKPGEPS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS AAC Y
Sbjct: 193 WESPWGQGRPGWHIECSVMSEDLLGLPFDIHGGGKDLVFPHHENEIAQSEAACGCMFSKY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTIR + + + +R+FL++ HYRS L++S L A
Sbjct: 253 WIHNGFVNVNQEKMSKSLGNFFTIRDVLKEFDAEIVRYFLMTTHYRSALDFSQDHLLEAE 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++ IY L + +S F K I AE D+F M DD NT L
Sbjct: 313 KSLNRIYTMLDE----ISRFNAGKKGVDITKEAEKMKETFMDKFQTAMDDDFNTPEALAA 368
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ I + +L K K +L E+++ + + +VL I+ P + L
Sbjct: 369 MFE----VIRETNRLLGSKPNKISFPALQEAVQDVFKVILDVLGIVKYTPEKWFRINLS- 423
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
++EE++ Q I++RA A+K+K+F +D IR +L ++GI L+D TI+R
Sbjct: 424 ----------ISEEELRQKIQDRADAKKDKNFELADSIRQELKQQGIELLDTIDGTIYRA 473
Query: 422 C 422
Sbjct: 474 V 474
>gi|125974555|ref|YP_001038465.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|256004086|ref|ZP_05429071.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281419079|ref|ZP_06250096.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|385779993|ref|YP_005689158.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|419721338|ref|ZP_14248502.1| cysteinyl-tRNA synthetase [Clostridium thermocellum AD2]
gi|419726884|ref|ZP_14253904.1| cysteinyl-tRNA synthetase [Clostridium thermocellum YS]
gi|187629806|sp|A3DH43.1|SYC_CLOTH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125714780|gb|ABN53272.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|255992009|gb|EEU02106.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281407228|gb|EFB37489.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|316941673|gb|ADU75707.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|380769849|gb|EIC03749.1| cysteinyl-tRNA synthetase [Clostridium thermocellum YS]
gi|380782508|gb|EIC12142.1| cysteinyl-tRNA synthetase [Clostridium thermocellum AD2]
Length = 468
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 244/421 (57%), Gaps = 31/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L++++ EY VD L T PR +++++ I +MI ++
Sbjct: 72 KMIKRANEEGITVKELADKFINEYFVDAKGLGIKEATVHPRATENIDAIIEMIKKLEEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+ K YG+LS Q LE+ G R+ VD RK++P DFALWKA K GEP+
Sbjct: 132 FAYNVDGDVYFSARKFTEYGKLSHQSLEDLELGARIDVDERKKDPMDFALWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIAQS AA +
Sbjct: 192 WDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLVFPHHENEIAQSEAANGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + + EKM+KS GNFFT+R I + + +R F++SAHYRSP+N+S L+ A
Sbjct: 252 WLHNGFINVDGEKMAKSKGNFFTVRDIAKTFDYEVIRFFMLSAHYRSPINFSAELLEQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
+ + IY L + E +EH + +I + + N+L + +F M DD+NT+
Sbjct: 312 NGLERIYNCLDNLEY----LKEHAQAEKITDSERELQNRLLGIKAKFIEAMDDDINTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D +K +N+++N + SL SL +KE+ +LG +
Sbjct: 368 IAAIF-DIVKEVNTNINATSNSSKEIIDFSL--SL------IKELGGVLG---------I 409
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q+ + K L ++++ +LIE R ARK KD+ +D+IR L GI L D +
Sbjct: 410 AQKSRQKVL------DKEIEELIERRQKARKEKDWKTADEIRDKLKEMGIILEDTPQGVK 463
Query: 419 W 419
W
Sbjct: 464 W 464
>gi|126641281|ref|YP_001084265.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
Length = 447
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 49 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 108
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 109 AAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 168
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 169 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 228
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 229 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 288
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 289 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEA 337
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 338 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 385
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 386 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 442
Query: 419 WR 420
WR
Sbjct: 443 WR 444
>gi|164686505|ref|ZP_02210533.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
16795]
gi|164604516|gb|EDQ97981.1| cysteine--tRNA ligase [Clostridium bartlettii DSM 16795]
Length = 474
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/419 (39%), Positives = 243/419 (57%), Gaps = 26/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+++ P ++ +Y +EY VD L + P+V+D++EQI + ++ +
Sbjct: 80 KIIKRSHEENITPEEVATKYIKEYFVDADGLGIKRASVHPQVTDNIEQIIAFVKELEDKG 139
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F +K +YG+LSG + E AG R+ V+ +KR+P DF LWKA K GEP
Sbjct: 140 YAYAVNGDVYFDTKKFKDYGKLSGIKQEELEAGARIEVNDQKRHPMDFVLWKAKKEGEPG 199
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS MS YL DIH GG DL FPHHENEIAQS A + +Y
Sbjct: 200 WASPWGEGRPGWHIECSVMSNRYLGETIDIHAGGQDLKFPHHENEIAQSEARSGKNFSNY 259
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HN ++ NNEKMSKSLGNFFT+R+I+E Y +R F++S HYR+P+N+S L+ +
Sbjct: 260 WLHNEYINVNNEKMSKSLGNFFTVREISEIYDLEVVRLFMLSTHYRNPINFSDEILNQSK 319
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y + E ++ E K +D + R +F M DD+NT+ ++
Sbjct: 320 AGLERLYNAKEKAEFTINNL-EDSKMTEEEAKLQDELASFRQKFIDAMDDDVNTADAVSA 378
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A KF+NS++ K+ Q+ L NE+ VL I+
Sbjct: 379 IFELA-KFMNSNITENSSKEFAQKALDEF-------NELTGVLNIVN------------- 417
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
KD K+ ++ +E++ +LIE+R A+KNK+F +D+IR L KGI L D + W+
Sbjct: 418 -KD---KKEDILDEEIEKLIEQRTEAKKNKNFQLADEIRQQLLDKGIVLEDTRQGVKWK 472
>gi|419136924|ref|ZP_13681722.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|377984810|gb|EHV48038.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
Length = 460
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/420 (42%), Positives = 243/420 (57%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA D GE+ SL+ R E +D A L LPP +PR ++H+ QI MI ++++
Sbjct: 73 KIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQIISMIERLLHRQ 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR+P DF LWK AK GEP
Sbjct: 133 FAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ HYL + FDIHGGG DLIFPHHENEIAQS +A V+
Sbjct: 193 VWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQSTSANDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G VT N EKMSKSL +FFT+R I R+ ++R FL+SAHYR PLNYS + A
Sbjct: 253 YWLHTGMVTVNKEKMSKSLNSFFTLRDILNRFDAQSVRFFLLSAHYRKPLNYSEENIHLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y Q + + S ++H + R F M DD NT L
Sbjct: 313 RASLTRLYTACQFADGSRS--EQH--------------DAWRARFCGAMDDDFNTPQALA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L + +L +L+ + N +LGLL A L+
Sbjct: 357 ILFE-----LTREINRLCGTN-DDEAAALATTLKDLGN-------VLGLLEQSA-DAFLK 402
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D L AEL + + +LI +R+ AR+ + K+D++R +L +GI L D+G+ T WR
Sbjct: 403 NRSD--LHPAEL--QLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVGENTSWR 458
>gi|335424982|ref|ZP_08553974.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
gi|334886972|gb|EGM25316.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
Length = 462
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/420 (41%), Positives = 243/420 (57%), Gaps = 33/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE P ++S R+ + D A L P+ +P + H++QI MI ++I N
Sbjct: 73 KIINRANETGETPEAISTRFTEAMREDEAALGLKAPSAEPTATGHVDQIIAMIERLIENG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++ V NYG LSG+RL + RAGER+AV+ K +P DF LWKAAK EP
Sbjct: 133 AAYASDNGDVYYDVSTFDNYGALSGRRLADLRAGERIAVNEAKTDPLDFVLWKAAKPDEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAMS H L + FDIHGGG+DL FPHHENEIAQS AA V+
Sbjct: 193 SWDSPWGQGRPGWHIECSAMSTHCLGASFDIHGGGLDLQFPHHENEIAQSEAATGQRYVT 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG VT ++EKMSKSLGNF TIR + +Y ++R+F++S HYRSPL Y+V +D+A
Sbjct: 253 TWMHNGFVTVDDEKMSKSLGNFLTIRDVLAKYDAESVRYFVLSTHYRSPLAYNVDAMDAA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ A+ +Y L+D ++P N A + + F M+DDLNT +
Sbjct: 313 TSALSRLYTALRD----VAP----------NDAQSEAADAYEARFTDAMADDLNTPAAIA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ M + Q +Q ++ I + + +GLL + Q
Sbjct: 359 VLFE-----------MARDCQRLKQDDC--QAAGAIAARLALLAGRIGLL-----EQSPQ 400
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ + + +++ER AR K+F+++D+IR LT + I L D T+WR
Sbjct: 401 VFLQGHAGEEGLSADTIEAMLQERRDARAAKNFARADEIRDALTAQNIVLEDGPDGTLWR 460
>gi|78044929|ref|YP_361143.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
gi|109894889|sp|Q3A9P1.1|SYC_CARHZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77997044|gb|ABB15943.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 465
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/424 (41%), Positives = 245/424 (57%), Gaps = 37/424 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G +P+ L +Y EY D L T P+V++H+ +I +M+ +I
Sbjct: 72 KIINRALEEGISPIELGQKYIIEYFKDADRLGVKRATVHPKVTEHIPEIIEMVKGLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY VEG+V+FAV+ +YG+LSG+ LE +AG RV VD +K+NP DFALWK AK GEP
Sbjct: 132 YAYEVEGNVYFAVDSFSDYGKLSGRDLEELKAGARVEVDEKKKNPLDFALWKKAKPGEPY 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMS YL FDIHGGG DL+FPHHENE+AQS A Y
Sbjct: 192 WESPWGPGRPGWHIECSAMSLKYLGENFDIHGGGADLVFPHHENEVAQSEAFTGKPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG +T N EKMSKSLGNFF +R+I E++ +R FL+S HYRSPL++ +L+ A
Sbjct: 252 WMHNGFITVNQEKMSKSLGNFFLVREILEKFPGRVVRFFLLSTHYRSPLDFDDKKLNEAK 311
Query: 242 DAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ + +Q+ EV P + ARI E N LRD F+ M DD NT+ +
Sbjct: 312 AALERVDNFVQNLKEVNPLPGE-----ARIE-IQEKITNFLRD-FNEAMEDDFNTAQAMA 364
Query: 301 GAFQDALKFINSSL---NMLK-KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
F+ ++F N+ + N+ K+ ++ L++ + IE V E + + P +
Sbjct: 365 SLFE-LVRFGNTQIASGNLTAGDKKLFEEALNVYTQVFGIEFGVLEKIAGEDITP---FV 420
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
E+ LIE RA +K K + +D IR +L ++GI L D K
Sbjct: 421 EL---------------------LIEVRARLKKEKKYDLADFIRDELKKQGIILEDTPKG 459
Query: 417 TIWR 420
W+
Sbjct: 460 VRWK 463
>gi|417568294|ref|ZP_12219157.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|417578880|ref|ZP_12229713.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|395554589|gb|EJG20591.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|395568018|gb|EJG28692.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
Length = 477
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 79 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 138
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 139 AAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 198
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 199 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 258
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 259 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 318
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 319 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 368 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 415
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 416 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 472
Query: 419 WR 420
WR
Sbjct: 473 WR 474
>gi|184157544|ref|YP_001845883.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|332874278|ref|ZP_08442197.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|384131638|ref|YP_005514250.1| cysS [Acinetobacter baumannii 1656-2]
gi|385236958|ref|YP_005798297.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|387124491|ref|YP_006290373.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407932282|ref|YP_006847925.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|417869475|ref|ZP_12514460.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|417872928|ref|ZP_12517811.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|417878946|ref|ZP_12523538.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|417881912|ref|ZP_12526221.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|421203711|ref|ZP_15660846.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|421533834|ref|ZP_15980114.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|421629211|ref|ZP_16069951.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|421687025|ref|ZP_16126761.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|421703081|ref|ZP_16142548.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|421706801|ref|ZP_16146204.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|421790903|ref|ZP_16227093.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|424052919|ref|ZP_17790451.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|424064410|ref|ZP_17801895.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|425755223|ref|ZP_18873045.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|445464068|ref|ZP_21449451.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
gi|445481109|ref|ZP_21455771.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|187631665|sp|A3M419.2|SYC_ACIBT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558609|sp|B2HX34.1|SYC_ACIBC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|183209138|gb|ACC56536.1| Cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|193076930|gb|ABO11663.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
gi|322507858|gb|ADX03312.1| cysS [Acinetobacter baumannii 1656-2]
gi|323517455|gb|ADX91836.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|332737503|gb|EGJ68411.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|342230338|gb|EGT95178.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|342230714|gb|EGT95540.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|342232733|gb|EGT97504.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|342238444|gb|EGU02876.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|385878983|gb|AFI96078.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|398326755|gb|EJN42898.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|404566489|gb|EKA71635.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|404670997|gb|EKB38866.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|404673146|gb|EKB40945.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|407192917|gb|EKE64090.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|407193200|gb|EKE64368.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|407900863|gb|AFU37694.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|408702925|gb|EKL48332.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|409988287|gb|EKO44460.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|410404321|gb|EKP56389.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|425495265|gb|EKU61454.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|444770795|gb|ELW94937.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|444779964|gb|ELX03936.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
Length = 473
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|333367377|ref|ZP_08459646.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
gi|332978776|gb|EGK15466.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
Length = 508
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 243/421 (57%), Gaps = 12/421 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE L+ R+ D A L C P +PR + H++ + MI + +
Sbjct: 96 KIIARANENGEEIGQLTERFITAMHEDAAALGCESPDAEPRATQHIDDMLQMIGTLEQKE 155
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV+ YG+LS ++LE+ +AG RV VD+ K+NP DF LWKAAKAGEP
Sbjct: 156 HAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDKKNPFDFVLWKAAKAGEP 215
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
WDS WG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 216 QWDSSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFPHHENEIAQSEAATGCTYAN 275
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + + EKMSKSLGNFFTIR++ E++HP +R F++S+HYRS +N+S L A
Sbjct: 276 NWMHVGFINVDGEKMSKSLGNFFTIREVMEKFHPETIRFFILSSHYRSQVNFSDAALKEA 335
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-INKLRDEFHARMSDDLNTSHIL 299
+ +YQ L+ E L A I+ A+ D I F M+DD NT +
Sbjct: 336 HSGLTRVYQALKAAEAVLDTPVNAQSEATIDTASIDSEIRGYSANFIKAMNDDFNTPQAI 395
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F + +N L ++ Q + +++ + L I G + P +E L
Sbjct: 396 SVLFS-----LAKEVNKLARETENDQATAKLKAAAVTLKGLAGTLNI-GQVKP---TEFL 446
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q ++ ++T+E + LI+ER A+ NK+F+++D+IR L + I L D + T W
Sbjct: 447 QA-HIGSVDEEQMTDEQIDTLIQERIDAKANKNFARADEIRNLLQQNNIELEDSKQGTTW 505
Query: 420 R 420
R
Sbjct: 506 R 506
>gi|421694240|ref|ZP_16133865.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
gi|404568242|gb|EKA73346.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
Length = 473
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 252/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|224825711|ref|ZP_03698815.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
gi|224601935|gb|EEG08114.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
Length = 457
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 236/421 (56%), Gaps = 40/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE +L+ R+ D L + P ++PR ++H+ + +I +I N
Sbjct: 73 KIIKRAAENGEPIQALTARFIDAMNEDFDALGVIHPDFEPRATEHVPGMIALIETLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + P YG+LSG+ LE+ RAGERV VD KR+P DF LWKAAK GEP
Sbjct: 133 RAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDVNKRDPFDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEIAQS A V+
Sbjct: 193 SWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFPHHENEIAQSEGAHNHDFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG + +NEKMSKSLGNFFTIR++ E+Y +R F++ AHYRSPLNYS + LD A
Sbjct: 253 YWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSPLNYSDVHLDDA 312
Query: 241 SDAVFYIYQTLQDCEVA-LSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
++ +Y L++ ++ E AR F M DD NT +
Sbjct: 313 KQSLTRLYTALKNVTATDIAIDWEENDYAR--------------RFRQAMDDDFNTVEAM 358
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F A + + Q L+++L +LGLL
Sbjct: 359 AVLFDLAGEV---------NRGESAAQAGLLKALGA----------VLGLL-----QRAP 394
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q+ AEL+ + + LI+ R AR K++++SD+IR +L KG+ L D + T W
Sbjct: 395 QEFLQGGSTAAELSADAIEALIQARRDARTAKNWAESDRIRDELAAKGVILEDGAQGTTW 454
Query: 420 R 420
R
Sbjct: 455 R 455
>gi|254448716|ref|ZP_05062174.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
gi|198261724|gb|EDY86011.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
Length = 463
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA + GE +L+ R+ D L LPP +PR + H++ I D+I +I+
Sbjct: 72 KILKRAEENGEAYDTLTARFIDAMHEDERALGVLPPDREPRATQHIQDIIDLIQVLIDKG 131
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY E GDV+F+V +YG+LS ++LE+ G RV ++S KR+P DFALWK A+ +
Sbjct: 132 AAYTAENGDVYFSVSDFADYGKLSNKKLEDLLEGVRVELESSKRDPRDFALWKGAQQDQV 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W++PWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS AA ++ +
Sbjct: 192 GWEAPWGYGRPGWHIECSAMSTSCLGNHFDIHGGGPDLVFPHHENEIAQSEAATGETYAN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V +NEKMSKSLGNFFTIR++ E+Y P +R+FL+S+HYRSP+NYS L+ A
Sbjct: 252 VWMHAGAVRVDNEKMSKSLGNFFTIREVLEKYQPEVIRYFLLSSHYRSPINYSDNSLEQA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y AL P+ + A A D + F M DD NT L+
Sbjct: 312 RAGLERLY-------TALRPYSD---VAADEAALSD--SSALQAFQQVMDDDFNTREALS 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +Q QQ+ E+ R I ++K + R+LGLL A +
Sbjct: 360 VLFDLA-------------RQLNQQEG---EAARNIAVQLKTLGRVLGLLEGDAQA---- 399
Query: 361 QLKDKAL--KRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK L L+++D+ LI ER A++NKDF+++D IR LT GI L D T
Sbjct: 400 YLKSGGLVSDAGSLSDDDIDALIAERIEAKQNKDFARADDIRDQLTEAGIQLEDGPAGTQ 459
Query: 419 WR 420
WR
Sbjct: 460 WR 461
>gi|347540729|ref|YP_004848154.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643907|dbj|BAK77740.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 457
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 237/421 (56%), Gaps = 40/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE +L+ R+ D L + P ++PR ++H+ + +I +I N
Sbjct: 73 KIIKRAAENGEPIQALTARFIDAMNEDFDALGVIHPDFEPRATEHVPGMIALIETLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + P YG+LSG+ LE+ RAGERV VD KR+P DF LWKAAK GEP
Sbjct: 133 RAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDVNKRDPFDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECS MS H+L FDIHGGG DL FPHHENEIAQS A V+
Sbjct: 193 SWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFPHHENEIAQSEGAHNHDFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG + +NEKMSKSLGNFFTIR++ E+Y +R F++ AHYRSPLNYS + LD A
Sbjct: 253 YWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSPLNYSDVHLDDA 312
Query: 241 SDAVFYIYQTLQDCEVA-LSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
++ +Y L++ ++ E AR F M DD NT +
Sbjct: 313 KQSLTRLYTALKNVTATDIAIDWEENDYAR--------------RFRQAMDDDFNTVEAM 358
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F + +N + Q L+++L +LGLL
Sbjct: 359 AVLFD-----LAGEVN----RGESAAQAGLLKALGA----------VLGLL-----QRAP 394
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q+ AEL+ + + LI+ R AR K++++SD+IR +L KG+ L D + T W
Sbjct: 395 QEFLQGGSTAAELSADAIEALIQARRDARAAKNWAESDRIRDELAAKGVILEDGAQGTTW 454
Query: 420 R 420
R
Sbjct: 455 R 455
>gi|421788727|ref|ZP_16225007.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-82]
gi|410401286|gb|EKP53436.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-82]
Length = 428
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 30 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 89
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 90 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 149
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 150 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 209
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 210 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 269
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 270 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAMCDDFNTAEA 318
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 319 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 366
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 367 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 423
Query: 419 WR 420
WR
Sbjct: 424 WR 425
>gi|387129742|ref|YP_006292632.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
gi|386271031|gb|AFJ01945.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
Length = 464
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/427 (41%), Positives = 246/427 (57%), Gaps = 45/427 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE +L+ RY E D L L P Y+P+ ++ M +I +M+ +I+
Sbjct: 73 KIIKRATENGETIEALTERYIAEMHRDADALGVLKPDYEPKATESMGEILEMVQTLIDKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++ V + P+YG+LSG+ + RAGERVAV+ K +P DF LWKAAKAGEP
Sbjct: 133 LAYTADNGDVYYDVSEFPSYGKLSGRDVNELRAGERVAVNEAKTDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAMSA+ L FDIHGGG DL FPHHENEIAQS A +V+
Sbjct: 193 AWESPWGLGRPGWHIECSAMSANCLGEHFDIHGGGQDLQFPHHENEIAQSEGAHGCQSVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V ++EKMSKSLGNFFT+R++ E Y A+R+F++S+HYRSPLNY+ QL+ A
Sbjct: 253 YWMHNGFVRIDDEKMSKSLGNFFTVREVLELYPAEAVRYFILSSHYRSPLNYAEDQLEQA 312
Query: 241 SDAVFYIYQTLQDC----EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
A+ Y +L++ EV +E G F M DD NT+
Sbjct: 313 KAALTRFYTSLREVQPQEEVRWQEDKEFGP-----------------RFKEAMDDDFNTA 355
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
L+ + + +LN ++ +Q + L LL G
Sbjct: 356 LALS-----VMADVRQALNKAFERGQGIEQAAYYAGL---------------LLSFGDVL 395
Query: 357 EVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
+ QQ D L ++++ + L+ ER AR +K+++++D+IR LT GI L D
Sbjct: 396 GLFQQNADAFLVGDTGSDDEAAEIDALVAERNQARADKNWARADEIRDQLTEMGIVLEDA 455
Query: 414 GKETIWR 420
+T WR
Sbjct: 456 AGKTSWR 462
>gi|445434059|ref|ZP_21439862.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
gi|444756927|gb|ELW81464.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
Length = 473
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 253/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDHSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQAAVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADAIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|421622103|ref|ZP_16063011.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC074]
gi|408696360|gb|EKL41899.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC074]
Length = 428
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 30 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 89
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ER+ V+ K++P DF LWK AK
Sbjct: 90 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEVEKKHPFDFVLWKHAKKN 149
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 150 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEKY 209
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 210 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 269
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 270 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 318
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 319 MAILFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 366
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 367 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 423
Query: 419 WR 420
WR
Sbjct: 424 WR 425
>gi|239503714|ref|ZP_04663024.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB900]
gi|421678924|ref|ZP_16118806.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
gi|410391847|gb|EKP44211.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
Length = 473
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEKY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|312135922|ref|YP_004003260.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311775973|gb|ADQ05460.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 465
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/411 (40%), Positives = 241/411 (58%), Gaps = 28/411 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ R+ +EY D L T PR ++ + + +I ++I+
Sbjct: 72 KMINRANKEGITVFELAERFIKEYYKDADRLNVKRATKNPRATEEIPDMITLIQKLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F K YG+LS + +E AG RV + +K +P DFALWKA K GEP+
Sbjct: 132 YAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDLSEKKEDPLDFALWKAKKEGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWH+ECS M+ YL DIH GG DLIFPHHENEIAQS AA +
Sbjct: 192 WLSPWGEGRPGWHVECSVMAMKYLGETIDIHAGGQDLIFPHHENEIAQSEAATGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP ALR F++ AHYR PLN+S+ ++ A
Sbjct: 252 WLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEALRLFMLQAHYRKPLNFSLDLIEQAE 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ IY+ ++ E + E G + N + + + + +F M DDLNT+ TG
Sbjct: 312 SALKRIYKCYENLEYLIR--NETGSNSS-NSTLKASLEQFKIKFIDAMEDDLNTAEA-TG 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
+ ++ IN+ N K + L + +KE+ ILG+L E +Q
Sbjct: 368 YLFEMVREINTHANTCSK-----------DVLILARDTLKELCGILGIL------EQYEQ 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+D+ ++L+L+E+R ARK K+F+++D+IR +L G ++D
Sbjct: 411 KEDE-------IPLEILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLD 454
>gi|417546818|ref|ZP_12197904.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|421656805|ref|ZP_16097102.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|421664669|ref|ZP_16104805.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|421665433|ref|ZP_16105546.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
gi|421672803|ref|ZP_16112757.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|400384706|gb|EJP43384.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|408503798|gb|EKK05551.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|408711840|gb|EKL57032.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|410378497|gb|EKP31115.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|410390191|gb|EKP42588.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
Length = 473
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|260549524|ref|ZP_05823742.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|424056184|ref|ZP_17793705.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425739726|ref|ZP_18857922.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|260407317|gb|EEX00792.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|407441224|gb|EKF47730.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425496120|gb|EKU62262.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
Length = 473
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 252/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKRAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQGFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRYLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADAIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|384142630|ref|YP_005525340.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
gi|347593123|gb|AEP05844.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
Length = 473
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 252/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQYLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|359396712|ref|ZP_09189763.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
gi|357969390|gb|EHJ91838.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
Length = 468
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 177/424 (41%), Positives = 239/424 (56%), Gaps = 42/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA++ GE+ +L+ R D A L LPP+++PR + H+E I MI +I
Sbjct: 76 KILKRADENGESITALTERMIDAMHEDEARLFVLPPSHEPRATGHIEDIVAMIETLIEKG 135
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++ V K NYG+L+ ++L++ R+G RV VD K +P DF LWKAAK GE
Sbjct: 136 FAYAADNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKEDPLDFVLWKAAKPGEA 195
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA + V+
Sbjct: 196 HWASPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQSEAATGKTYVN 255
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V N EKMSKSLGNFFTIR + + P +R L+++HYRSP+NYSV L A
Sbjct: 256 TWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASHYRSPINYSVDSLTEA 315
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ L P + A D + R+ F M DD NT L
Sbjct: 316 RKSLTRLYTALE----GLEPGE----------ANRDAASAYRERFTQVMDDDFNTPEALA 361
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N K+ QP + K+ E+K++ ILGL LQ
Sbjct: 362 VMFE-----LAREVNRAKQDQPVEAA--------KMAGELKQLGSILGL---------LQ 399
Query: 361 QLKDKALKRAE-----LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
Q+ LK + L+E ++ I +R A+ NKDF+++D IR +L GI L D +
Sbjct: 400 QVPQTFLKGTQQQGMPLSESEIEAKIAQRIEAKTNKDFAQADAIRDELAAMGIILKDSRE 459
Query: 416 ETIW 419
T W
Sbjct: 460 GTSW 463
>gi|381160970|ref|ZP_09870202.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
gi|380879034|gb|EIC21126.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
Length = 466
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 177/421 (42%), Positives = 241/421 (57%), Gaps = 31/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G L+ R+ D A L PPT +PR + H+++I M+ ++I +
Sbjct: 73 KIIARAAEQGIPIDQLTERFIAAMHEDAARLGVRPPTLEPRATAHIDEILAMVQRLIERE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV++ V YGRLSG+ + RAG RV VD KR+P DF LWKAAK GEP
Sbjct: 133 HAYVADKGDVYYQVSSFSGYGRLSGKDPGDLRAGARVDVDQHKRDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHH+NEIAQS A + V+
Sbjct: 193 AWESPWGPGRPGWHIECSAMSTQCLGNHFDIHGGGADLQFPHHDNEIAQSEGATGEPFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V N+EKMSKSLGNFFT+R+I RY P +R+F++++HYRSPLNY L+ A
Sbjct: 253 IWMHNGFVRINDEKMSKSLGNFFTVREILTRYRPEEIRYFILASHYRSPLNYDESNLEQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHARMSDDLNTSHIL 299
A+ +Y L+ A PAAE D + R F M DD NT L
Sbjct: 313 RSALTRLYTALRGLPAA-------------EPAAEPDGGDAHRQRFTDAMDDDFNTPEAL 359
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F + +N L+ S + + E++ + +LGL+ A + L
Sbjct: 360 AVLFD-----LAREINRLRD--------SDLSRAAALGAELRSLGAVLGLVQDQA-DDFL 405
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ D + ++ ++ LI+ R AR++KDF+++D+IR L + GI L D T W
Sbjct: 406 RGGADAQPEGP--SDAEIENLIQRRVQARQDKDFAEADRIRDQLQQAGILLEDGAGGTRW 463
Query: 420 R 420
R
Sbjct: 464 R 464
>gi|417551275|ref|ZP_12202353.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417564947|ref|ZP_12215821.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395556703|gb|EJG22704.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400385730|gb|EJP48805.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 473
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|114048058|ref|YP_738608.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
gi|123030490|sp|Q0HTK4.1|SYC_SHESR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113889500|gb|ABI43551.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
Length = 461
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 238/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L++R E D L + P ++PR + H+ +I DM+ +++
Sbjct: 75 KIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEIIDMVERLLARG 134
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF LWK +K GEP
Sbjct: 135 HAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 195 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS +NYS L A
Sbjct: 255 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLLSGHYRSQINYSEENLKQA 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ ++P AE+ + K F A M DD NT +
Sbjct: 315 RAALERLYTAIKDVDLTVAP-----------APAEEFVAK----FKAAMDDDFNTPEAYS 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + +N LK Q + +K++ +LGL L
Sbjct: 360 VLFD-----MVREINRLKTTDMAQASAMAV--------AMKQLADVLGL---------LH 397
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D A + E ++++V + LI ER AR KD+ +D R L G+ L D T
Sbjct: 398 QAPD-AFFKGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLEDGPSGT 456
Query: 418 IWR 420
WR
Sbjct: 457 TWR 459
>gi|402309177|ref|ZP_10828173.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
gi|400373296|gb|EJP26230.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
Length = 466
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 249/421 (59%), Gaps = 32/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G + + ++++Y EY D + T PRV++++++I I +I+
Sbjct: 72 KIIKKANEEGISAIEVADKYIDEYYKDATAIGIRKATVHPRVTENIKEIIGFIQVLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ GDV+F V+K YG+LS + ++ +G R+ V+ +K++P DFALWK K GE
Sbjct: 132 FAYVLGGDVYFEVKKFDEYGKLSHKNIDELVSGARIDVNEQKKSPLDFALWKEKKEGEIG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL S DIH GG DLIFPHHENEIAQS + +Y
Sbjct: 192 WDSPWGVGRPGWHIECSVMSNKYLGSNIDIHSGGQDLIFPHHENEIAQSECKNGCTFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +N KMSKSLGNFFT+R + + Y LR F++++HYRSP+NYS LDSA
Sbjct: 252 WMHNGYINIDNVKMSKSLGNFFTVRDVLKVYDGDVLRFFMLTSHYRSPINYSKDLLDSAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC---INKLRDEFHARMSDDLNTSHI 298
++ +++C+ +L + + ++ +D + ++ F +M+DDLNT+
Sbjct: 312 SSL----DRIKNCKSSLDFSLQKSQDKEVSQEEKDILENVQAIKSTFIGKMNDDLNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D +K N+S+N K Q LS++ NE+ VL I A +E
Sbjct: 368 ITAIF-DLVKLANTSVNENSSKTFVQSILSML-------NELTAVLNI-------ANNE- 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K E + +LIE R A+K+KDF+K+D+IR +L + GI + D + T
Sbjct: 412 ---------KAEEQDTSKIEELIELRNQAKKSKDFAKADEIREELRKMGIEIKDTRQGTQ 462
Query: 419 W 419
W
Sbjct: 463 W 463
>gi|445406289|ref|ZP_21431727.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
gi|444781577|gb|ELX05494.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
Length = 473
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|421648270|ref|ZP_16088677.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-251]
gi|408515631|gb|EKK17214.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-251]
Length = 428
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 30 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 89
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ER+ V+ K++P DF LWK AK
Sbjct: 90 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEVEKKHPFDFVLWKHAKEN 149
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 150 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 209
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 210 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 269
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 270 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEA 318
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 319 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 366
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 367 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 423
Query: 419 WR 420
WR
Sbjct: 424 WR 425
>gi|421797751|ref|ZP_16233787.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
gi|410395945|gb|EKP48230.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
Length = 473
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ER+ V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEVEKKHPFDFVLWKHAKKN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEKY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAILFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|402758353|ref|ZP_10860609.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 7422]
Length = 473
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 254/422 (60%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ L+ R+ Q D A+L C P P+ +++++Q+++MI +++
Sbjct: 75 KIIARANENGESIQQLTARFIQAMNEDAANLGCAEPDEAPKATEYIDQMQNMIGTLVDKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K NYGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPAANGDVYFEVSKFNNYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + + + Q +G+ E + F+ M DD NT+
Sbjct: 315 EAKTALSRFYHSFKAYQ------QVYGQ-----KTVETLEQGFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ +Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQAEQATMLYSTLRHLTN-------ILGLVQHDVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +ALK L++ ++ I++R A+K KDF+K+D IR L +G+ L D + TI
Sbjct: 412 KSDIGQEALK---LSDTEIENFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQGTI 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|406980236|gb|EKE01868.1| hypothetical protein ACD_21C00032G0011 [uncultured bacterium]
Length = 459
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 180/419 (42%), Positives = 240/419 (57%), Gaps = 36/419 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA +L + +L+ R D L +PP ++PRV++H+ QI D+I +IN D
Sbjct: 73 KIIKRAQELNIDYQTLTQRMIDSMHTDEKSLDVIPPDFEPRVTEHIPQIVDLIQTLINKD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV++ V K YG+L+ Q L + R G RV KR+P DF LWKAAK EP
Sbjct: 133 FAYVTKTGDVYYEVAKFKAYGKLAHQDLNSLRTGIRVETSEDKRDPLDFVLWKAAKPNEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ YL FDIHGGG DL FPHH+NE+AQS AA V+
Sbjct: 193 FWPSPWGNGRPGWHIECSAMAKKYLGENFDIHGGGNDLQFPHHQNELAQSEAANGCCFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V N EKMSKSLGNFF +++ ++YHP LR+F++++HY+SP+N+S L++A
Sbjct: 253 YWMHMGFVQVNQEKMSKSLGNFFVLKEALKKYHPEILRYFVVASHYQSPINFSENNLENA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y TL+D +A N D N+ FHA M DD NT L
Sbjct: 313 HAALQRFYITLRDLPIA-------------NTKDFDPKNQFNKRFHAAMDDDFNTPEALA 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D + IN N QLSL + +K + ILG +LQ
Sbjct: 360 VLF-DLAREINRLRN--------ADQLSLAAQHGAL---LKHLGWILG---------ILQ 398
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+K LK A + E + LI R AARK+K+++++D+IR +LT I L D T W
Sbjct: 399 DDPEKFLK-AGIDENKIQSLINARNAARKDKNWAEADRIRGELTAMRITLEDTPNGTTW 456
>gi|293608603|ref|ZP_06690906.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427426577|ref|ZP_18916628.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
gi|292829176|gb|EFF87538.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425696633|gb|EKU66338.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
Length = 473
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 252/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|421675648|ref|ZP_16115568.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
gi|421693049|ref|ZP_16132696.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|404559102|gb|EKA64374.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|410381910|gb|EKP34471.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
Length = 473
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ + L L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEVLA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|306819816|ref|ZP_07453471.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304552185|gb|EFM40121.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 466
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 250/421 (59%), Gaps = 32/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G + + ++++Y EY D A + T PRV++++++I I +I+
Sbjct: 72 KIIKKANEEGISAIEVADKYIDEYYKDAAAIGIRKATVHPRVTENIKEIIGFIQDLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ GDV+F V+K YG+LS + ++ +G R+ V+ +K++P DFALWK K GE
Sbjct: 132 FAYVLGGDVYFEVKKFDEYGKLSHKNIDELISGARIDVNEQKKSPLDFALWKEKKEGEIG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQS + +Y
Sbjct: 192 WDSPWGVGRPGWHIECSVMSNKYLGANIDIHSGGQDLIFPHHENEIAQSECKNGCTFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +N KMSKSLGNFFT+R + + Y LR F++++HYRSP+NYS LDSA
Sbjct: 252 WMHNGYINIDNVKMSKSLGNFFTVRDVLKVYDGDVLRFFMLTSHYRSPINYSKDLLDSAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC---INKLRDEFHARMSDDLNTSHI 298
++ +++C+ +L + + ++ +D + ++ F +M+DDLNT+
Sbjct: 312 SSL----DRIKNCKSSLDFSLQKSQDKEVSQEEKDILENVQAIKSTFIEKMNDDLNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D +K N+S+N K Q LS++ NE+ VL I A +E
Sbjct: 368 ITAIF-DLVKLANTSVNENSSKTFVQSILSML-------NELTAVLNI-------ANNE- 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K E + +LIE R A+K+KDF+K+D+IR +L + GI + D + T
Sbjct: 412 ---------KAEEQDTSKIEELIELRNQAKKSKDFAKADEIREELRKMGIEIKDTRQGTQ 462
Query: 419 W 419
W
Sbjct: 463 W 463
>gi|417552874|ref|ZP_12203944.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|417561155|ref|ZP_12212034.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|421199231|ref|ZP_15656395.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|421456054|ref|ZP_15905397.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|421632844|ref|ZP_16073487.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|421805171|ref|ZP_16241064.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
gi|395523737|gb|EJG11826.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|395565198|gb|EJG26846.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|400211152|gb|EJO42115.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|400393133|gb|EJP60179.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|408707563|gb|EKL52846.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|410409769|gb|EKP61693.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
Length = 473
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWPSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|294650979|ref|ZP_06728319.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292823080|gb|EFF81943.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 473
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 254/422 (60%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ L+ R+ D A+L C+ P P+ +++++Q+++MI+ ++N
Sbjct: 75 KIIARANENGESIQQLTARFIDAMNEDAANLGCVAPDEAPKATEYIDQMQNMISTLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A +
Sbjct: 195 EPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEATTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + + +Q+ ++ + + + F+ M DD NT+
Sbjct: 315 EAKTALSRFYHSFK-------AYQQVYGQKTVDALEQSFVER----FNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ +Q L +LR++ N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQAEQATVLYSTLRQLTN-------ILGLVQHNVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ D+ LI++R A+K KDF+K+D IR L +G+ L D + TI
Sbjct: 412 KSDIGQDALA---LSDTDIEDLIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQGTI 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|337284525|ref|YP_004623999.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
gi|334900459|gb|AEH24727.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
Length = 476
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 240/422 (56%), Gaps = 26/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+P L+ ++ + +L DMA L+ P PRV++H+ I I ++
Sbjct: 74 KIIKRAQETGEDPKELAEKFIRVFLEDMAALKVKPADVYPRVTEHVNDIIAFIERLEEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V K YG+LSG ++E + G RV K+NP DFALWK AK GEP
Sbjct: 134 YAYEGSDGVYFEVSKFKEYGKLSGIKVEELKKGARVEPGEGKKNPEDFALWKKAKPGEPK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS+ YL FDIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 194 WESPWGEGRPGWHIECSAMSSKYLGESFDIHGGGNDLIFPHHENEIAQSEACFGHEWVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V EKMSKSLGNF T+R++ +RY P +R F++ HYRSPL+Y+ L A
Sbjct: 254 WLHTGFVMVKGEKMSKSLGNFVTVRELLQRYSPEVIRFFVLQKHYRSPLDYTEEGLMHAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +Y TL++ VA+ + + I + R +F+ M DD NT+ L
Sbjct: 314 NNLERLYNTLENIRVAMERVELAYTWGEEEFELYEVIKEGRRKFYEAMDDDFNTAEALKA 373
Query: 302 AFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ +++++N + K ++PK+ LRK K V + GL
Sbjct: 374 VFE-----VSNAVNRYLTKVERPKES------VLRKAWEFFKAVSEVFGL---------- 412
Query: 360 QQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+D ++ EE +++ L++ RA RK K + +D+IR +L + GI L D + T+
Sbjct: 413 --FEDYFKEQKTGNEEALIKLLVDVRAQLRKEKRYDLADKIREELRKLGIQLEDTPQGTV 470
Query: 419 WR 420
W+
Sbjct: 471 WK 472
>gi|372277954|ref|ZP_09513990.1| hypothetical protein PSL1_22904 [Pantoea sp. SL1_M5]
Length = 416
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 243/423 (57%), Gaps = 41/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN GE L R E D L LPP +P+ +DH+ QI MI ++I
Sbjct: 29 KIISRANKTGETWQMLVARMSHEMHKDFVALNVLPPDVEPKPTDHIPQIIAMIERLIQRG 88
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ E DV F+ E + +YG+LSGQ ++N R+G RV+V++ K NP DF LWKAAKAGEP
Sbjct: 89 HAYITREHDVIFSTETARDYGKLSGQNIDNLRSGARVSVNTYKNNPLDFVLWKAAKAGEP 148
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAM++++L + FDIHGGG DLIFPHHENEIAQS +A V+
Sbjct: 149 CWNSPWGVGRPGWHIECSAMNSYHLGTHFDIHGGGSDLIFPHHENEIAQSTSANDGPYVN 208
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G VT EKMSKSL NF T+R + E+Y LR F ++ HYR PLN+S +D+A
Sbjct: 209 YWMHTGMVTVEQEKMSKSLNNFLTLRDMLEQYDGEVLRLFYLTGHYRKPLNFSRCNVDAA 268
Query: 241 SDAVFYIYQTLQDCEVA--LSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
++ +Y C +A LS AR F M DD NT
Sbjct: 269 RSSLTRLYSV---CRLASGLSSMHHEQWQAR---------------FQQAMDDDFNTPKA 310
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L F D +FIN +L +S E + + +K++ +LGL Y E
Sbjct: 311 LAVLF-DLTRFINQTL------------VSDPEEAKALATTLKQLGNLLGLF----YREP 353
Query: 359 LQQLKDKALKRAELTEEDVLQL-IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
L++ L + ++ DV+ ++ER AR+N++++++D +R L +G+ L D G +T
Sbjct: 354 YDWLQNNPL--WDQSQLDVISARVKEREEARQNQEWARADALRQWLEEQGVELEDKGGKT 411
Query: 418 IWR 420
W+
Sbjct: 412 HWK 414
>gi|113970833|ref|YP_734626.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
gi|123029526|sp|Q0HH98.1|SYC_SHESM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113885517|gb|ABI39569.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
Length = 461
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 238/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L++R E D L + P ++PR + H+ +I DM+ +++
Sbjct: 75 KIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHITEIIDMVERLLARG 134
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF LWK +K GEP
Sbjct: 135 HAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 195 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS +NYS L A
Sbjct: 255 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLLSGHYRSQINYSEENLKQA 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ ++P AE+ + K F A M DD NT +
Sbjct: 315 RAALERLYTAIKDVDLTVAP-----------APAEEFVAK----FKAAMDDDFNTPEAYS 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + +N LK Q + +K++ +LGL L
Sbjct: 360 VLFD-----MVREINRLKTTDMAQASAMAV--------AMKQLADVLGL---------LH 397
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D A + E ++++V + LI ER AR KD+ +D R L G+ L D T
Sbjct: 398 QAPD-AFFKGEGSDDEVAEIEALIVERNRARVEKDWPAADVARNRLNELGVVLEDGPSGT 456
Query: 418 IWR 420
WR
Sbjct: 457 TWR 459
>gi|42523767|ref|NP_969147.1| hypothetical protein Bd2317 [Bdellovibrio bacteriovorus HD100]
gi|61216207|sp|Q6MKR7.1|SYC_BDEBA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|39575974|emb|CAE80140.1| cysS [Bdellovibrio bacteriovorus HD100]
Length = 482
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 239/420 (56%), Gaps = 16/420 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+LG +P LS +Y EY D A L P P+V++HM+ I+ M+ +++
Sbjct: 73 KIINRANELGMSPTELSEKYIAEYKKDFASLGLRPHDMNPKVTEHMDDIRSMVESLVSQK 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV +++E +YG+LSG+ ++ AG RV VD +KRNP DFALWKAAK GE S
Sbjct: 133 KAYEAQGDVLYSIESFKDYGKLSGRNTDDLLAGARVEVDEKKRNPMDFALWKAAKPGEVS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWGPGRPGWHIECSAM + + DIHGGG+DLIFPHHENEIAQS + V Y
Sbjct: 193 WPSPWGPGRPGWHIECSAMIKNLFGDQIDIHGGGMDLIFPHHENEIAQSEGCTGKAFVKY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHN + +KMSKSLGN T+R+ E Y+ + ++SAHYR+ ++ ++ A
Sbjct: 253 WMHNNMLNFGGQKMSKSLGNIVTMREFLEMYNAEIYKWMILSAHYRTLSDFGDEAVERAV 312
Query: 242 DAVFYIYQTLQDCEVALSP--FQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
+ +Y L E L+P QE A+I +D K+ + M+ D T
Sbjct: 313 GGLSRVYSALSMAESYLTPEVTQEDAAFAKIT---QDAWKKVEEA----MNHDFGTPDAF 365
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ +F N+ + K P Q +L N V+++ ++ L A++ L
Sbjct: 366 AAMFEVVRQF-NAQVRRGMKANPAIQGKAL-----AFHNFVRKMGSMMSLFQEPAHA-FL 418
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+L D LK+ L V L+ ER AR KDF+KSD++RA +T GI++ D + + W
Sbjct: 419 IKLDDMLLKKMNLERSAVDALVAERGEARAAKDFAKSDELRAKITALGISVSDTPEGSFW 478
>gi|169796523|ref|YP_001714316.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213156364|ref|YP_002318784.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|215483986|ref|YP_002326211.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|301346200|ref|ZP_07226941.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301510179|ref|ZP_07235416.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301594397|ref|ZP_07239405.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|332853945|ref|ZP_08435065.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332870201|ref|ZP_08439096.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|417572308|ref|ZP_12223162.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|421644195|ref|ZP_16084680.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|421657702|ref|ZP_16097952.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|421700456|ref|ZP_16139970.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|421799698|ref|ZP_16235688.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|226735042|sp|B7GWA1.1|SYC_ACIB3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735043|sp|B7IBU3.1|SYC_ACIB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558611|sp|B0VAU1.1|SYC_ACIBY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169149450|emb|CAM87336.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213055524|gb|ACJ40426.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|213985743|gb|ACJ56042.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|332728301|gb|EGJ59682.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332732368|gb|EGJ63625.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|400207876|gb|EJO38846.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|404569987|gb|EKA75070.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|408506006|gb|EKK07722.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|408711688|gb|EKL56889.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|410409239|gb|EKP61172.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
Length = 473
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ER+ V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|298528309|ref|ZP_07015713.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511961|gb|EFI35863.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 485
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 244/428 (57%), Gaps = 27/428 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G + ++ +Y + + +DM +L L +PR + H+E++ + +++
Sbjct: 72 KIIKRAEEEGLDSDQVAEKYIEAFYLDMDELNVLKADVEPRATRHIEEMIQVTKSLLDKG 131
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ G D++F V + P YG+LSG+ +E ++G R+A D K +P DFALWK AK GEP
Sbjct: 132 FAYITSGKDIYFRVRRMPRYGQLSGRNIEELQSGSRIAPDEEKEDPLDFALWKTAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWH+EC+AMS YL FDIHGGG DL FPHHENE AQS AA V
Sbjct: 192 SWDSPWGAGRPGWHLECTAMSEKYLGIPFDIHGGGQDLAFPHHENEKAQSEAAFDREFVK 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V ++EKMSKSLGNF TIR I + +H LR FL++ HYRSPL+YS L+
Sbjct: 252 YWVHNGFVRVDSEKMSKSLGNFITIRDIMKDFHGEVLRFFLLTKHYRSPLDYSDGSLEET 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y + L +E + P A + L ++ M DDLNT+ +
Sbjct: 312 EKALKRVYWAKTGLQKELQ--KEKWSKGQGFPEASQELQDLASKWDQAMQDDLNTAEAVG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP-----GAY 355
F + + ML+ K + RK E + + ++LG+L G +
Sbjct: 370 YVF----GLVRLANRMLEDK-----------TFRKSEAGKEIIQQMLGMLEGWGDALGVF 414
Query: 356 ----SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
E L+QLK R ++ + V +++ +R ARK+KDF +D IR +LT KGI +M
Sbjct: 415 QRSGEEFLEQLKLMRCNRLDIDPQTVQEMVLKRQQARKDKDFETADNIREELTAKGIEVM 474
Query: 412 DMGKETIW 419
D + W
Sbjct: 475 DTPEGPRW 482
>gi|169830402|ref|YP_001716384.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
gi|229558630|sp|B1I0T1.1|SYC_DESAP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169637246|gb|ACA58752.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
Length = 478
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/424 (42%), Positives = 241/424 (56%), Gaps = 24/424 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+ + G +P +L+ +Y EY VD L P+VSDH+ +I +IT II+
Sbjct: 72 KIINRSREEGIDPQTLAAKYVDEYFVDADALNVRRADVHPKVSDHIPEIIALITMIIDRG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV GDV+FAV K YGRLS + L++ AG RV V +KR+P DFALWKAAK GEP
Sbjct: 132 LAYVAGGDVYFAVRKFGGYGRLSKRSLDDLLAGARVEVGEQKRDPLDFALWKAAKPGEPW 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL + FDIHGGG DLIFPHHENEIAQS A + Y
Sbjct: 192 WESPWGRGRPGWHIECSAMALKYLGTGFDIHGGGADLIFPHHENEIAQSEGATGEPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG +T EKMSKSLGN F +R++T Y P ALR FL+S HYR+PL+Y ++++
Sbjct: 252 WIHNGFITIREEKMSKSLGNVFLVRELTRLYPPEALRLFLLSNHYRNPLDYDPEAMEASV 311
Query: 242 DAVFYIYQTLQDCEVAL---SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
AV + L +L +P + G R+ E + L+ F A M DD NT+ +
Sbjct: 312 RAVNRLKTCLGLLRESLDRPAPDGDGGGGNRL----EAVLEVLQGRFEAAMDDDFNTA-L 366
Query: 299 LTGAFQDALKFINSSL--NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
D +N+ L N + Q+ L L ++ R+LG+ P
Sbjct: 367 AQAVMFDLTHEVNTYLHQNDRPSRGALQKALDLFDAFN----------RVLGIFPEHKGR 416
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
VL+ +L++ + LI R AR+NKDF+ +D+IR L GI L D +
Sbjct: 417 IVLE----AGAVSGDLSQGLLDLLIALRQDARRNKDFATADRIRDGLRALGILLEDTPQG 472
Query: 417 TIWR 420
W+
Sbjct: 473 VRWK 476
>gi|366163863|ref|ZP_09463618.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 467
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 242/422 (57%), Gaps = 31/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L++R+ +EY +D L T P+ +++++ I D+I ++ N
Sbjct: 72 KMIKRANEEGITVKDLADRFIKEYFIDAKGLGIDEATVHPKATENIDAIIDLIKKLEENG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F++ K YG+LS LE+ G V VD RK+NP DFA+WKA K GEP+
Sbjct: 132 FAYNVNGDVYFSIGKFKEYGKLSHHSLEDLAIGSSVNVDERKQNPMDFAVWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DLIFPHHENEIAQS AA Y
Sbjct: 192 WDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLIFPHHENEIAQSEAASGKPFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + NNEKMSKS GNFFT+R I E++ +R F++SAHYRSP+N+S L+ A
Sbjct: 252 WMHNGFINVNNEKMSKSAGNFFTVRDIVEKFDYEVIRFFMLSAHYRSPINFSADLLEQAQ 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
+ + IY L + L EH + ++ + ++L + +F M DDLNT+
Sbjct: 312 NGLERIYNCLDN----LVYLGEHAQAKEMSDEEKSLQSRLLEIKGKFIEGMDDDLNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D +K +NS N+ ++ + SL ++E+ +LG +
Sbjct: 368 IAAIF-DIVKEVNS--NITASSNSSKEIIDFSHSL------IRELGGVLG---------I 409
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q+ K+ L + +V LI +R ARK K++ SD+IR L GI L D +
Sbjct: 410 GQKQKENNL------DSEVEALISQRQQARKEKNWKLSDEIRDKLKDMGIVLEDTPQGVK 463
Query: 419 WR 420
W+
Sbjct: 464 WK 465
>gi|260557959|ref|ZP_05830171.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260408469|gb|EEX01775.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452949314|gb|EME54782.1| cysteinyl-tRNA ligase [Acinetobacter baumannii MSP4-16]
Length = 473
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVTKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATMLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|419765672|ref|ZP_14291901.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741410|gb|EJK88639.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 471
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/420 (42%), Positives = 242/420 (57%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA D GE+ SL+ R E +D A L LPP +PR ++H+ QI MI ++++
Sbjct: 84 KIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQIISMIERLLHRQ 143
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ E GDV F+ + YG+LSGQ + RAG R+ V+ KR+P DF LWK AK GEP
Sbjct: 144 FAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEP 203
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ YL + FDIHGGG DLIFPHHENEIAQS +A V+
Sbjct: 204 VWPSPWGEGRPGWHIECSAMNCRYLGTHFDIHGGGSDLIFPHHENEIAQSTSANVGPYVN 263
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G VT N EKMSKSL NFFT+R I R+ ++R FL+SAHYR PLNYS + A
Sbjct: 264 YWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLLSAHYRKPLNYSEENIHLA 323
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y Q + + S ++H + R F M DD NT L
Sbjct: 324 RASLTRLYTACQFADGSRS--EQH--------------DAWRARFCEAMDDDFNTPQALA 367
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L + +L +L+ + N +LGLL A L+
Sbjct: 368 ILFE-----LTREINRLCGTN-DDEAAALATTLKDLGN-------VLGLLEQSA-DAFLK 413
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D L AEL + + +LI +R+ AR+ + K+D++R +L +GI L D+G+ T WR
Sbjct: 414 NRSD--LHPAEL--QLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVGENTSWR 469
>gi|169633852|ref|YP_001707588.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii SDF]
gi|229558610|sp|B0VS71.1|SYC_ACIBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169152644|emb|CAP01639.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii]
Length = 473
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 252/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTMRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YW+H G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWIHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|448747541|ref|ZP_21729198.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
gi|445564821|gb|ELY20936.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
Length = 468
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 239/421 (56%), Gaps = 36/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA++ GE+ +L+ R D A L LPP+++PR + H++ I MI +I
Sbjct: 76 KILKRADENGESITALTERMIDAMHEDEARLFVLPPSHEPRATGHIDDIVAMIETLIEKG 135
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++ V K +YG+L+ ++L++ RAG RV VD K +P DF LWKAAK GE
Sbjct: 136 FAYAADNGDVYYRVRKFADYGKLNNRQLDDMRAGSRVDVDVHKEDPLDFVLWKAAKPGEA 195
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA + V+
Sbjct: 196 HWASPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQSEAATGKTYVN 255
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V N EKMSKSLGNFFTIR + + P +R L+++HYRSP+NYSV L A
Sbjct: 256 TWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASHYRSPINYSVDSLTEA 315
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ E + A D + R+ F M DD NT L
Sbjct: 316 RKSLTRLYTALEGLE--------------LGAANSDDASAYRERFTQVMDDDFNTPEALA 361
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ + +N K++QP + K+ E+K++ +LGLL P + +
Sbjct: 362 VMFE-----LAREVNRAKQEQPNEAA--------KLAGELKQLGSVLGLLQQEPQTFLKG 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
QQ + L+E ++ I +R A+ NKDF+++D IR +L GI L D + T
Sbjct: 409 TQQ------QGMPLSESEIEAKIAQRIEAKANKDFAQADAIRDELAALGIILKDSREGTS 462
Query: 419 W 419
W
Sbjct: 463 W 463
>gi|238022971|ref|ZP_04603397.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
gi|237865779|gb|EEP66917.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
Length = 474
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/434 (40%), Positives = 232/434 (53%), Gaps = 53/434 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE L+ R+ D L P +P+ ++H+ Q+ MI Q+I N
Sbjct: 75 KIIARANENGETIQQLTARFIAAMNEDSDALGVQRPDVEPKATEHIAQMIAMIEQLIANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + P YG+LSG+ L++ RAGERV VD KR+P DF LWKAAK EP
Sbjct: 135 KAYSAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKPEEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ----- 175
W SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQSC A
Sbjct: 195 HWQSPWGNGRPGWHIECSAMGGELFGDTFDIHGGGADLQFPHHENEIAQSCGAHHGISGE 254
Query: 176 ----------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 225
DS+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y +R F++ AH
Sbjct: 255 HAPRAAHKTIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYDAEVVRFFILRAH 314
Query: 226 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 285
YRSPLNYS LD A ++ +Y L + A EH N F
Sbjct: 315 YRSPLNYSDAHLDDAKHSLTSLYNALGNVAPAPFTLSEHA-------------NDYTRRF 361
Query: 286 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 345
+A M DD +T + F+ L K+ K Q L L+ +
Sbjct: 362 YAAMDDDFDTVKAVAVLFE------------LAKEVNKTQSAELSGCLKALAG------- 402
Query: 346 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 405
+LGLL + + D L+ + + LI +R AR NK++++SD+IR +L
Sbjct: 403 VLGLLQREPHEFLQSGAPDNG-----LSADAIEALIAQRNLARANKNWAESDRIRDELAA 457
Query: 406 KGIALMDMGKETIW 419
+G+ L D G ET W
Sbjct: 458 QGVVLRDAGGETTW 471
>gi|373454259|ref|ZP_09546131.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
gi|371935992|gb|EHO63729.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
Length = 481
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/428 (41%), Positives = 237/428 (55%), Gaps = 34/428 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN G + ++S+RY Y M L PRVS+HM+ I M+ +I
Sbjct: 75 KIINKANAEGTDWKTISDRYIDAYFQVMDALHVRRADVYPRVSEHMDDIIHMVETLIQKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ GDV++ + +YGRLSG+++E+ AG R+ V+ KRNP DFALWKAAK GEP
Sbjct: 135 HAYVLGGDVYYDISTFKDYGRLSGRKIEDMLAGARIEVNDEKRNPGDFALWKAAKPGEPF 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS HYL FD HGGG DLIFPHHENEIAQS C C V
Sbjct: 195 WESPWGKGRPGWHIECSAMSIHYLGKTFDFHGGGSDLIFPHHENEIAQSEGCTGCH--FV 252
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+FL+S HYRSPL++S +L+
Sbjct: 253 DYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRSPLDFSDDRLEE 312
Query: 240 ASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
A + L+D V +E + + A E FH M DD NT
Sbjct: 313 AEKNM----DKLKDVIGRVKELSGREGSEVTEASKALEKAAEDDMKVFHEAMDDDFNTG- 367
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ TGA + K IN N + + SL K K +L ILG+L
Sbjct: 368 LATGAMFELAKAINVYYNDVHSGIGFNKA-----SLEKAGKAFKTILDILGIL------- 415
Query: 358 VLQQLKDKALKRAELTEE----DVLQLI-EERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+K K+ E ++ D++ +I R +ARK K + +D+IR L GI + D
Sbjct: 416 ------EKEWKKTEAYDDKDYNDLMNVILAVRQSARKAKQYQLADEIRDKLGEIGIVIED 469
Query: 413 MGKETIWR 420
W+
Sbjct: 470 TPTGARWK 477
>gi|409405694|ref|ZP_11254156.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
gi|386434243|gb|EIJ47068.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
Length = 463
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/431 (43%), Positives = 247/431 (57%), Gaps = 56/431 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+NR+ D A L P ++PR + ++ ++ D+I ++ N
Sbjct: 75 KIIHRAAENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATKYVPKMLDLIGKLEKNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P DF LWKAAK EP
Sbjct: 135 LAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLDFVLWKAAKPSEP 194
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
WDSPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQS A Q +
Sbjct: 195 DEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQFPHHENEIAQSEGAHQHT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P LR F++ AHYRSPLNYS L
Sbjct: 255 FVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRFFILRAHYRSPLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR-----MSDD 292
D A A+ +Y L+D + P A L DE HA+ ++DD
Sbjct: 315 DDARQALTRLYTALKD----------------VPPEAGGL---LADESHAQRFTEALNDD 355
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL-- 350
NT ++ F+ + + +N + + P Q + ++K + ILGLL
Sbjct: 356 FNTPMAVSVLFE-----LANEVN--RDRSPVQAR------------QLKALAGILGLLQR 396
Query: 351 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
P Y LK L + ++ LIE R AA+ KDF+++D++RA LT GI L
Sbjct: 397 APDEY------LKGGVAAADGLGQAEIEALIEARKAAKAGKDFAEADRLRAVLTEAGIIL 450
Query: 411 MDM-GKETIWR 420
D G T WR
Sbjct: 451 EDKPGGLTEWR 461
>gi|344344279|ref|ZP_08775143.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
gi|343804236|gb|EGV22138.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
Length = 462
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 241/420 (57%), Gaps = 33/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ +L+ R+ D A L L PT +PR + H+++I+ M+ +I+
Sbjct: 73 KIIRRAAENGESCAALTERFIAAMHEDAAALGVLAPTSEPRATAHIDEIQTMVATLIDKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++AV + P YG+LSG+ ++ RAG RV VD KR+P DFALWK AK GEP
Sbjct: 133 LAYAADNGDVYYAVSRFPGYGKLSGKDPQDLRAGARVEVDEAKRDPLDFALWKGAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS A +
Sbjct: 193 SWSSPWGEGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQSEGATGEPFAE 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V N EKMSKSLGNFFT+R++ ER+ +R+F++++HYRSPLNY+ QL SA
Sbjct: 253 VWMHNGFVRINEEKMSKSLGNFFTVREVLERFRAEEIRYFILTSHYRSPLNYADEQLQSA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ A +P + T F A M DD NT L
Sbjct: 313 RGALTRLYTALRGLPEAEAPAESAFAT----------------RFTAAMDDDFNTPEALA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N + +Q +L LR++ ++G+L + +
Sbjct: 357 VLFE-----LAREVNRARDAGEPEQAAALGAELRRLGG-------VIGILQ----DDPER 400
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ L + + +I +R AAR +D++++D++R LT GI L D + T WR
Sbjct: 401 YLRGGDGGTDGLDDAAIESMIAQRQAARAARDWAEADRLRDALTEAGIVLEDGAQGTTWR 460
>gi|424060453|ref|ZP_17797944.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
gi|404668405|gb|EKB36314.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
Length = 473
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 250/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVTKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|308273875|emb|CBX30475.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 478
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 256/424 (60%), Gaps = 27/424 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA LG ++ RY +E+ DM L T +P+ ++H+++I +I ++ +
Sbjct: 74 KIINRAVQLGIESHEVAERYIKEFYEDMDALNIKRATIEPKATEHIDKIIALIEILLKKE 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GD++++V+K +YG+LSG++LE+ AG RV +D RK NP DFALWK+ K GEP
Sbjct: 134 IAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEIDERKNNPFDFALWKSQKPGEPY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS+ YL FDIHGGG DLIFPHHENEIAQS A + Y
Sbjct: 194 WESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIFPHHENEIAQSEGAFEKPFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N+EKMSKSLGNF I+ I + YHP ++R FL+S HYRSP++++ ++ +
Sbjct: 254 WVHNGFVNINHEKMSKSLGNFLLIKDILKSYHPDSVRLFLLSNHYRSPIDFTDKAMEESE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---KLRDEFHARMSDDLNTSHI 298
A+ IY +Q E + A I +D IN ++F M DD NT+
Sbjct: 314 AALDKIYSAIQRVE----------EIADI--TGKDFINYPEGYWEKFCESMDDDFNTAKG 361
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYS 356
+ G D+++ IN +L + + ++I S I +++++ ++G+L P Y
Sbjct: 362 I-GYLFDSVRHIN---RLLDENSNSDEIKTIINS---IYADIRKMGDVIGILSEPAEIY- 413
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ K K ++ ++ + L+++R ARK KD+ K+D+IR L+ + + D +
Sbjct: 414 --FNKKKTKFIETKDVDPSLIDALVKQRFEARKAKDWKKADRIRDKLSGIDVIIEDKPEG 471
Query: 417 TIWR 420
+IW+
Sbjct: 472 SIWK 475
>gi|262278507|ref|ZP_06056292.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
gi|262258858|gb|EEY77591.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
Length = 473
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 252/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L C P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 SAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ + +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHDVDAFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|375335611|ref|ZP_09776955.1| cysteinyl-tRNA synthetase [Succinivibrionaceae bacterium WG-1]
Length = 366
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/394 (42%), Positives = 227/394 (57%), Gaps = 34/394 (8%)
Query: 28 DMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQ 86
D L P +P+ + H++ I +++ +I+N AYV GDV F+++ +YGRLSGQ
Sbjct: 4 DFDALGIARPDIEPKATAHIDDIINLVQTLIDNGNAYVASNGDVMFSIDSFKDYGRLSGQ 63
Query: 87 RLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 146
+LE+ +AG RV V+ KRNP DF LWK +K GEP W+SPWG GRPGWHIECSAM++HYL
Sbjct: 64 KLEDLKAGIRVNVEEAKRNPYDFVLWKMSKPGEPMWESPWGQGRPGWHIECSAMNSHYLG 123
Query: 147 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 206
FDIHGGG DL+FPHHENEIAQSC A V YWMH+G V N EKMSKSLGNFFTIR
Sbjct: 124 KVFDIHGGGSDLMFPHHENEIAQSCCAWHTDYVKYWMHSGMVMINKEKMSKSLGNFFTIR 183
Query: 207 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 266
+ +Y LR+FL+SA YR LNYSV ++ + A+ +Y L+D ++P
Sbjct: 184 DLLAKYDGETLRYFLLSAQYRGQLNYSVENIEQSRAALQRLYTALRDLPEGVAPTD---- 239
Query: 267 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 326
F M DD NT + F+ I +N+L++ +
Sbjct: 240 ------------TDYEKRFKEAMDDDFNTPLTYSIFFE-----IAKEINLLRESDITKAA 282
Query: 327 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 386
+L LRK+ +LGLL A S L+ + +L + LI+ER
Sbjct: 283 -NLGALLRKLAG-------VLGLLTHDASS----YLQGASGADDDLDVSKIEALIQERQE 330
Query: 387 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
ARKNKD++++D+ R +LT GI L D + TIWR
Sbjct: 331 ARKNKDWARADKARDELTAMGIVLEDGAQGTIWR 364
>gi|424742026|ref|ZP_18170361.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-141]
gi|422944458|gb|EKU39454.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-141]
Length = 428
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L C P P+ +++++Q+++MI ++N
Sbjct: 30 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYIDQMQNMIGNLVNKG 89
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 90 SAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 149
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 150 EPSWASPWGNGRPGWHIECSAMSTCCLGNLFDIHGGGSDLMFPHHENEIAQSEASTGEQY 209
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 210 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 269
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 270 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTESLDQSFVERFNNAMCDDFNTAEA 318
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 319 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 366
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 367 KSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQGTV 423
Query: 419 WR 420
WR
Sbjct: 424 WR 425
>gi|119774358|ref|YP_927098.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
gi|187631632|sp|A1S4X2.1|SYC_SHEAM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|119766858|gb|ABL99428.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
Length = 459
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 236/420 (56%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L + P+++PR + H+++I DM+T++++
Sbjct: 73 KIIKRANENGESCDSLTERLIGEMHADFDALNMVRPSFEPRATLHIDEIIDMVTRLLDRG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F V YGRLSGQ LE +AG RV VD KRNP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVDENKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHTGMVMVDREKMSKSLGNFFTIRDVLAHYDAQTVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ ++ + A++ +++ F A M DD NT +
Sbjct: 313 RASLERMYTALKGLDLTVEA-----------AGADEFVSR----FMAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K ++ L E+ EVL IL P E
Sbjct: 358 VLF-DMVREIN---------RLKTSDMAAASQLGVALKELAEVLGILSSTP-----EAFL 402
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q + A + AE+ LI ER AR KD+ +D R L G+ L D + T WR
Sbjct: 403 QGEGNADEVAEIE-----ALIVERNRARAEKDWPAADVARDRLNALGVVLEDGPEGTTWR 457
>gi|359428272|ref|ZP_09219308.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
gi|358236288|dbj|GAB00847.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
Length = 473
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 254/422 (60%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE L+ R+ D A+L C+ P P+ +++++Q+++MI+ +++
Sbjct: 75 KIIARANENGETIQQLTARFIDAMNEDAANLGCVAPDEAPKATEYIDQMQNMISTLVDKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPATNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + + + Q +G+ E + F+ M DD NT+
Sbjct: 315 EAKTALSRFYHSFKAYQ------QVYGQ-----KTVETLEQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ +Q +L +LR++ N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQAEQATALYSTLRQLTN-------ILGLVQHDVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + TI
Sbjct: 412 KSDIGQEALT---LSDTEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQGTI 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|299770841|ref|YP_003732867.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
gi|298700929|gb|ADI91494.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
Length = 473
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L C P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 SAYPAANGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QMYGQT-----TTETLDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRYLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|421652216|ref|ZP_16092579.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425750916|ref|ZP_18868870.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|445457362|ref|ZP_21446507.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
gi|408506489|gb|EKK08197.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425484701|gb|EKU51101.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|444776942|gb|ELX00979.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
Length = 473
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 250/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS + +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEVSTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQVTVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|323144957|ref|ZP_08079517.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
gi|322415236|gb|EFY06010.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
Length = 470
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/424 (42%), Positives = 231/424 (54%), Gaps = 46/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA++ + L+ + E D L + P +PR ++ + +I ++ ++I+N
Sbjct: 86 KIIKRAHERKVSAKELAENFIVEMHKDFDALNIMRPDEEPRATETIPEIIALVQRLIDNG 145
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV FA++ YGRLSGQ LE AG R+ ++ KRNP DF LWK +K GEP
Sbjct: 146 NAYVADNGDVMFAIDTFKQYGRLSGQNLEELEAGARIEIEKTKRNPFDFVLWKMSKPGEP 205
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ YL FDIHGGG DLIFPHHENEIAQSC AC V+
Sbjct: 206 SWSSPWGDGRPGWHIECSAMNLKYLGENFDIHGGGSDLIFPHHENEIAQSCCACHSKYVN 265
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V N+EKMSKSL NFFTIR + E Y +R FL+SA YRSPLNY+ LD A
Sbjct: 266 YWMHSGMVMINHEKMSKSLNNFFTIRDVLEHYDAETIRFFLLSAQYRSPLNYTQENLDKA 325
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+D + P + G ED K F M DD NT +
Sbjct: 326 KASLARLYTALRD----VVPVKAEG---------EDEYTK---RFKELMDDDFNTPGAMA 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D K +N E+ K+ + E+ +LG +L
Sbjct: 370 VLF-DLAKAVNKEEG---------------ETKAKLAGRLVELGSVLG---------ILY 404
Query: 361 QLKDKALKRAELTEED----VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
Q LK AE ++ D + LI+ER AR KDF +D R LT GI L D
Sbjct: 405 QNPSSFLKGAESSDNDEVSVIEALIQERKDARARKDFKAADAARDKLTAMGIVLEDGPSG 464
Query: 417 TIWR 420
T WR
Sbjct: 465 TTWR 468
>gi|392392061|ref|YP_006428663.1| cysteinyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523139|gb|AFL98869.1| cysteinyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
51507]
Length = 477
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 234/425 (55%), Gaps = 31/425 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R ++ G +PL L+ +Y +EY D L +P + P+ +DH+ ++ ++I +
Sbjct: 74 KIINRGHEEGRDPLELAEKYIEEYFKDAKALNLMPASIHPKATDHIPEMIEIIKGLEEQG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY VEGDV+FAV+K YG+LSG+ LE+ +AG RV V RKRNP DFALWK AK GEP
Sbjct: 134 LAYAVEGDVYFAVDKLSAYGKLSGRTLEDMQAGARVEVGERKRNPMDFALWKNAKPGEPF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W+SPWG GRPGWHIECSAMS YL S FDIHGGG DL+FPHHENEIAQS +
Sbjct: 194 WESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIAQSEGYLHGETFAR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYRSPL++ L A
Sbjct: 254 YWMHNAFLTFNQQKMSKSLGNFFTVREILEHFPGEVIRFYLLGTHYRSPLDFDDENLRMA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ + +++ + AL + A + D + R EF M DD N++
Sbjct: 314 QKGLERLQTSIRLADEALGRKGQACADAAADEKLRDAAEEARKEFEEAMDDDFNSALAYA 373
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG--LLPPG----A 354
F+ + +N + P E L K + ++ +LG L P A
Sbjct: 374 SLFE-----LGKVINAHVQAYPYSS-----EGLLKARGTLWKLADVLGFDLANPANKVEA 423
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+E L+Q+ D L+E RA ARK KD+ SD IR L GI L D
Sbjct: 424 GNEKLEQVMD--------------LLLEVRAIARKKKDWEMSDLIRDRLKDLGIVLEDTP 469
Query: 415 KETIW 419
+ W
Sbjct: 470 QGARW 474
>gi|375134138|ref|YP_004994788.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325121583|gb|ADY81106.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 473
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+ E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQ-----KTTETLDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALS---LSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|117923730|ref|YP_864347.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
gi|187629846|sp|A0L4P8.1|SYC_MAGSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117607486|gb|ABK42941.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
Length = 490
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 174/427 (40%), Positives = 242/427 (56%), Gaps = 29/427 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ +L+ RY + DMA L P +P+ ++H+ ++ MI +++
Sbjct: 81 KIIKRANERGESIQTLTQRYIDAFHQDMAALGVQPADIEPKATEHLPEMMQMIGTLMDKG 140
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV++AVE+ NYG+LSG+ L+ AG RV VDS K+NP DF LWK AK EP
Sbjct: 141 VAYASGGDVYYAVERFANYGQLSGKVLDEQEAGARVEVDSNKQNPMDFVLWKGAKPEEPQ 200
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + FDIHGGG DLIFPHHENEIAQ+ V+Y
Sbjct: 201 WDSPWGAGRPGWHIECSAMGTKYLGASFDIHGGGRDLIFPHHENEIAQTEGCTGQHAVNY 260
Query: 182 WMHNGHVTNNN-----EKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQ 236
W+HNG V N EKMSKSLGNF TIR + Y LR F++++HYRSPL++S
Sbjct: 261 WIHNGFVNVVNEEGESEKMSKSLGNFHTIRDLLALYPGEVLRFFILNSHYRSPLDFSFSL 320
Query: 237 LDSASDAVFYIYQTLQDCEVALS--PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLN 294
L++A + IY L+ + L P G+ A + A L + + M DD N
Sbjct: 321 LEAAKAGLDRIYTALRSAQALLGKLPGTPIGEPADVPAGAP---QDLVENYLKAMDDDFN 377
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T A+ F+ + ML +Q+ ++I + ++ + L + G P
Sbjct: 378 TPQ--------AIAFLFEAAKMLNTAISEQKDPAVIATWARLIRGLGHHLGLAGQDP--- 426
Query: 355 YSEVLQQLKDKALKRAE--LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+L ++ AE L E + LI ER+AAR K++++SD+IR L ++GI L D
Sbjct: 427 ------ELWFRSGIGAEQGLQAEAIEALIAERSAARAAKNWAESDRIRDTLAQQGIVLED 480
Query: 413 MGKETIW 419
T W
Sbjct: 481 GQHGTQW 487
>gi|445443240|ref|ZP_21442575.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
gi|444762811|gb|ELW87163.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
Length = 473
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 251/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ D A+L CL P P+ +++++Q+++MI ++
Sbjct: 75 KIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVTKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + +++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTETLDQSFVERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQEALA---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|374289282|ref|YP_005036367.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
gi|301167823|emb|CBW27408.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
Length = 487
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 240/422 (56%), Gaps = 8/422 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAND G P+ +S +Y E+ D L T+ P+V++ M++I + + +I ND
Sbjct: 74 KIIKRANDEGVEPIVISEKYIAEFEKDFNRLGLKKHTHNPKVTEFMDEIINYVETLIKND 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++G+VF+A++ +YG+LS + L+ AG+RV VDSRKRNP DF LWK +K GEP
Sbjct: 134 KAYEIDGEVFYAIDNYTDYGKLSKKNLDELNAGQRVEVDSRKRNPYDFVLWKPSKEGEPH 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM L DIHGGGIDLIFPHHENEIAQ +Y
Sbjct: 194 WTSPWGEGRPGWHIECSAMIKAILGETIDIHGGGIDLIFPHHENEIAQGEGCNCTKYCNY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHN + +EKMSKSLGN T R ++YHP L+ ++SAHYRS N + ++
Sbjct: 254 WMHNEFINLKDEKMSKSLGNVITGRAFMDQYHPEVLKFLMLSAHYRSNFNVTDEKIHQVI 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y+TL + L F E ++ ++N + + + + DD +T+ ++
Sbjct: 314 SGLRRVYETLATVDTILDTF-EKSESGKVNKNFQTTLTNSDAKIKKSLDDDFSTAEVVAT 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ F + LN+LKKK + ++ + + ++ ++ +++ L + L
Sbjct: 373 IFEVVRTF--NGLNLLKKK----KDVNSWTTAKAFKDWIQRYGQMMALFQEEP-VQFLSS 425
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
+ D +K L E +L+L++ R AR+NKD+ K+D+ R L GI D + W
Sbjct: 426 IDDIMIKEKNLDREKILELVKMREEARENKDWDKADEARDALHAMGIDFSDTPEGVKWNV 485
Query: 422 CV 423
V
Sbjct: 486 KV 487
>gi|392959715|ref|ZP_10325196.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|421056356|ref|ZP_15519274.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|421070069|ref|ZP_15531206.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392438194|gb|EIW16052.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|392448807|gb|EIW25984.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392456099|gb|EIW32858.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
Length = 481
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 177/429 (41%), Positives = 247/429 (57%), Gaps = 33/429 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN G ++NRY Y M L P VSDHM +I +++ ++
Sbjct: 74 KIIKAANTEGVTWDVIANRYIASYFEVMDKLNIRRADIYPTVSDHMTEIINIVEGLVAKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY+V+GDV+++VEK +YG+LSG+ +E+ +AG RV VD RK +P DFALWK+AK GEP+
Sbjct: 134 YAYIVDGDVYYSVEKFNDYGKLSGRDIEDMKAGARVDVDERKHHPMDFALWKSAKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN--V 179
W+SPWG GRPGWHIEC+AMS YL + FD HGGG DLIFPHHENEIAQS A ++S V
Sbjct: 194 WESPWGKGRPGWHIECTAMSLKYLGNSFDFHGGGSDLIFPHHENEIAQSEAFVEESQPFV 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N EKMSKSLGNFF ++ I E Y P LR F++S HYRSPL++S +L
Sbjct: 254 RYWLHNGFITVNEEKMSKSLGNFFLVKDILEHYSPEVLRFFVLSTHYRSPLDFSDERLSE 313
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGK---TARINPAAE--DCINKLRDEFHARMSDDLN 294
A ++L+ A+ + GK A N A E + ++F M DD N
Sbjct: 314 AQ-------RSLERLRTAVENVLQLGKMPDAANENKADELVKVARQAEEDFCKAMDDDFN 366
Query: 295 TSHILTGAFQDALKFINSSLNML---KKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP 351
T+ ++ F A K IN N + K + + +L E+ + N I+G+
Sbjct: 367 TALAISVMFGLA-KEINVYYNGVIAGKVQHTAKGYTALRETYFMMAN-------IIGIF- 417
Query: 352 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
+Q+ K EL E+ + +IE R AR+NKD++ +D++R L GI L
Sbjct: 418 -------VQEQTGKVDDSQELVEQLMDIIIEIRQHARQNKDWATADKVRDSLGAVGIVLE 470
Query: 412 DMGKETIWR 420
D + W+
Sbjct: 471 DSPQGVRWK 479
>gi|337288279|ref|YP_004627751.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium sp. OPB45]
gi|334902017|gb|AEH22823.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium geofontis OPF15]
Length = 490
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 247/421 (58%), Gaps = 14/421 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+N G L+ +Y +EY L L PTY+PR S+H+ +I +I ++I
Sbjct: 78 KIINRSNKEGIPWKELTQKYIEEYEKVTQALGLLKPTYEPRASEHIPEIISLIEKLIEKG 137
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F V K P+YG+LSG+++E AG R+ V +K+NP DFALWK+AK GEP
Sbjct: 138 LAYQSNGDVYFEVTKFPSYGKLSGRKIEELIAGVRIEVSEKKKNPLDFALWKSAKPGEPF 197
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIHGGG+DLIFPHHENEIAQS A + Y
Sbjct: 198 WESPWGKGRPGWHIECSAMALKYLGETIDIHGGGLDLIFPHHENEIAQSEGATEKQFARY 257
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
++H+G +T EKMSKSLGN+ T+ + + +HP ++ FL+S HYRSPL+Y + +
Sbjct: 258 FIHHGLITVKGEKMSKSLGNYVTMEYLLKTFHPEVIKAFLLSTHYRSPLDYREENIKNME 317
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A++ Y+TL + A P +E G + E + + F + + DD NT+ L
Sbjct: 318 KAIYRFYETLYWLKKA-QPLKE-GLLSEKARKLEKGLKDFENNFISALLDDFNTALALGH 375
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL-RILGL--LPPGAYSEV 358
F F N N + K + L+ L KIE +++++ +ILG+ P +
Sbjct: 376 LFS----FENEIYNFITKTPNLTTEEVLL--LEKIEKKIRDLSGKILGIGEREPDEFWNT 429
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ K K +K+ ED L+++R +ARK K+F +D+IR +L GI L D ET
Sbjct: 430 ERKRKLKIIKKDLKEIED---LVKKRESARKEKNFILADKIRDELKNLGIILKDTRTETF 486
Query: 419 W 419
W
Sbjct: 487 W 487
>gi|421624016|ref|ZP_16064894.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
gi|408702528|gb|EKL47938.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
Length = 473
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 250/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E L+ R+ D A+L CL P P+ +++++Q+++MI ++N
Sbjct: 75 KIIKRANENDETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ Y + + + Q +G+T E + F+ M DD NT+
Sbjct: 315 EAKTSLTRFYHSFKAYQ------QVYGQT-----TTEALDQSFIERFNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ Q L +LR + N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQADQATVLYSTLRHLTN-------ILGLVQHNVDDFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + T+
Sbjct: 412 KSDIGQDALA---LSDAEIENFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|426404249|ref|YP_007023220.1| hypothetical protein Bdt_2270 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860917|gb|AFY01953.1| hypothetical protein Bdt_2270 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 482
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 237/420 (56%), Gaps = 16/420 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+LG P LS +Y EY D A L P P+V++HM+ I+ M+ +++
Sbjct: 73 KIINRANELGMTPTELSEKYIAEYKKDFAMLGLRPHDMNPKVTEHMDDIRSMVENLVSQK 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV +++E +YG+LSG+ ++ AG RV VD +KRNP DFALWKAAK GE S
Sbjct: 133 KAYEAQGDVLYSIESFKDYGKLSGRNTDDLLAGARVEVDEKKRNPMDFALWKAAKPGEVS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWGPGRPGWHIECSAM + + DIHGGG+DLIFPHHENEIAQS + V Y
Sbjct: 193 WPSPWGPGRPGWHIECSAMIKNLFGDQIDIHGGGMDLIFPHHENEIAQSEGCTGKAFVKY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHN + +KMSKSLGN T+R+ E Y+ + ++SAHYR+ ++ ++ A
Sbjct: 253 WMHNNMLNFGGQKMSKSLGNIVTMREFLEMYNAEIYKWMILSAHYRTLSDFGDEAVERAV 312
Query: 242 DAVFYIYQTLQDCEVALSP--FQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
+ +Y L E L+P QE A+I +D K+ + M+ D T
Sbjct: 313 GGLSRVYSALSMAESYLTPEVTQEDAAFAKIT---QDAWKKVEEA----MNHDFGTPDAF 365
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ +F N+ + K P Q +L N V+++ + L A++ L
Sbjct: 366 AAMFEVVRQF-NAQVRRGMKVNPAIQGKAL-----AFHNFVRKMGSTMSLFQEPAHA-FL 418
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+L D LK+ L V L+ ER AR KDF+KSD++RA +T GI++ D + + W
Sbjct: 419 IKLDDMLLKKMNLERSAVDTLVAERGEARAAKDFAKSDELRAKITALGISVSDTPEGSFW 478
>gi|336449929|ref|ZP_08620386.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
gi|336283086|gb|EGN76293.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
Length = 460
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 180/426 (42%), Positives = 236/426 (55%), Gaps = 47/426 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E+ S++ R+ D L + P +PRV+ HM++I D++ Q++
Sbjct: 73 KIIRRAAENNESIDSITERFLGYMHDDFRALNLVEPDIEPRVTTHMQEIIDLVAQLVEKK 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V P YGRLSGQ LE +AG RVAV K++ DF LWK AKA EP
Sbjct: 133 HAYVASSGDVLFDVSSFPEYGRLSGQNLEQLQAGARVAVTEGKQDQMDFVLWKRAKADEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWESPWGAGRPGWHIECSAMNGKHLGKHFDIHGGGSDLMFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V N EKMSKSLGNFFTIR + Y +R FL+S HYRS LNYS LD A
Sbjct: 253 YWMHTGMVQVNQEKMSKSLGNFFTIRDVLASYAAETVRFFLLSGHYRSQLNYSEAHLDQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTS 296
++ IY ++ IN AE +R+ + AR ++DD N
Sbjct: 313 HASLERIYTAMRG----------------IN--AETASASVRESYEARIREALNDDFNVP 354
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
++ F+ I +N + + + SL L + L GA
Sbjct: 355 EAMSVIFE-----ITREVN-----RQRSENKSLAAEL------------VFLLQEYGAIL 392
Query: 357 EVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+LQQ D+ LK +E E + LIE+R +AR+ KD++ +D R +L GI L D
Sbjct: 393 GILQQQPDEFLKGSEDDSEVAKIEALIEQRNSAREAKDWAGADAARDELQALGIVLEDTA 452
Query: 415 KETIWR 420
+ T+WR
Sbjct: 453 EGTLWR 458
>gi|336311084|ref|ZP_08566052.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
gi|335865499|gb|EGM70522.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
Length = 459
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 238/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L+ R E D L L P ++PR + H+E+I DM+ +++
Sbjct: 73 KIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIEEIIDMVERLLERG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ T +PA E +F A M DD NT +
Sbjct: 313 RAALERLYTAIKDVDL----------TVAADPAEE-----FVAKFKAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + + + I + +K++ +LGLL
Sbjct: 358 VLF-DMVREIN------------RLKTTDIAKASALAVAMKQLADVLGLLSQDP------ 398
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
A + E ++++V + LI ER AR KD++ +D R L G+ L D T
Sbjct: 399 ----SAFFKGEGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVVLEDGPSGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|300857267|ref|YP_003782251.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
gi|300437382|gb|ADK17149.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
Length = 465
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 166/424 (39%), Positives = 247/424 (58%), Gaps = 37/424 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++A D L +++ +EY D L T PR + ++ +I + I +I+ D
Sbjct: 72 KMIKKAQDEHITVKELGDKFIKEYYKDADALHIKRATVNPRATLYITKIIEFIGDLIDRD 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K NYG+LSGQ +++ RAG R+ VD RK++P DFA+WK K GEP+
Sbjct: 132 YAYEIDGDVYFSTKKFSNYGKLSGQNIDDLRAGARIDVDERKKDPMDFAVWKGQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS + Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAHDLLGETIDIHAGGSDLMFPHHENEIAQSEGRTGKTFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+ V NN+KMSKSL NFFT+R+I E+Y P +R F++S HYR+ +N+S+ LDS
Sbjct: 252 WMHSAFVNVNNQKMSKSLNNFFTVREILEKYEPDVIRMFMLSGHYRTQINFSMELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALS-----PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
A+ +Y ++ + E L P E+ K R + + K + + +M DD NT+
Sbjct: 312 SALDRLYNSITNLENLLDNKEDIPISENEKEYR------NKLGKYKQRYIEKMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
++ F D +K IN S+N + S +E +R N ++E+ GA
Sbjct: 366 DAISVIF-DLVKDINVSIN----------KDSSVEVIRDSLNLIREL---------GAPL 405
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+LQQ K ++ E+++ LIE+R AR K+++ SD+IR DL +GI L D +
Sbjct: 406 GILQQSKRGSI------EKEIEALIEKRQIARSEKNWALSDKIRDDLKAQGIVLEDTPEG 459
Query: 417 TIWR 420
W+
Sbjct: 460 VRWK 463
>gi|158319520|ref|YP_001512027.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
gi|187629787|sp|A8MLB7.1|SYC_ALKOO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|158139719|gb|ABW18031.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
Length = 464
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 247/422 (58%), Gaps = 34/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ G P +S R+ +EY D L P+V+++M +I + +++
Sbjct: 72 KIIRRANEEGVAPEEISERFIKEYFYDAGTLGIEKADIHPKVTENMAEIIAFVAKLVEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F V K YG+LS Q LE+ +AG R+ ++ K+NP DFALWK+AKAGEPS
Sbjct: 132 HAYESNGDVYFDVSKYEEYGKLSKQSLEDLQAGARIEINEYKKNPLDFALWKSAKAGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIHGGG DL+FPHHENEIAQS A +Y
Sbjct: 192 WESPWGNGRPGWHIECSAMAKRYLGETIDIHGGGGDLVFPHHENEIAQSEACSGKKFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G++ +N+KMSKSL NFFT R+I+E + LR F++SAHYR+P+N+S L++A
Sbjct: 252 WLHVGYLNVDNKKMSKSLNNFFTPREISEEFDLENLRFFMLSAHYRNPINFSRDLLEAAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
+ + +Y + E L E+ ++ ++ I+ L +++F + DD NT+
Sbjct: 312 NGLDRLYTGKNNLEYLL----ENAAEREVSEEEKNFIHGLQSFKNQFIDAVDDDFNTADG 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D ++ INS ++ K+ + L+ E+ +LGLL
Sbjct: 368 IAVIF-DLVREINSHISEKNSKKAVEASYDLL----------MELTGVLGLLK------- 409
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ AE EE++ +LI ER ARK+K+F+ SD+IR DL KGI L D +
Sbjct: 410 ---------REAEDLEEEIERLIAERQQARKDKNFALSDKIRDDLKEKGIVLEDTAQGVK 460
Query: 419 WR 420
WR
Sbjct: 461 WR 462
>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
gi|187629847|sp|A1U1Q7.1|SYC_MARAV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
Length = 463
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/424 (42%), Positives = 243/424 (57%), Gaps = 41/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+RRA++ GE L++R + D A L L P +PR + ++ I MI ++I
Sbjct: 72 KILRRADENGEVYTDLTDRMIRAMHEDEAKLGVLSPNEEPRATAFIDDIIAMIQKLIAGG 131
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV+FAVE P+YG+LS ++LE+ AG RV V KR+PADFALWKAAK GE
Sbjct: 132 HAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQEAKRSPADFALWKAAKPGEV 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQS A + V
Sbjct: 192 SWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFPHHENEIAQSECATGHTFVH 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS ++YS L A
Sbjct: 252 TWMHAGAIRVNKEKMSKSLGNFFTIREILEKYPAEVVRYFLVSSHYRSQVDYSEDNLAEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRD-EFHARMSDDLNTSHI 298
+ +Y L+ I PA E D D F M DD NT+
Sbjct: 312 GRTLTKLYHALRG----------------IVPAKEADVAETDHDRRFAEVMDDDFNTAGA 355
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYS 356
+ L + + +N +++ + E+ ++ + + +LGLL P A+
Sbjct: 356 IA-----VLHAVANDINHYRREGDE-------EAAKRSAAVLVRLGAVLGLLQQNPEAFF 403
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ A +ELT ED+ +I+ RA ARK KDF+++D+IR DL KGI L D +
Sbjct: 404 Q--------ADTGSELTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKGIILDDSREG 455
Query: 417 TIWR 420
T WR
Sbjct: 456 TTWR 459
>gi|345874764|ref|ZP_08826564.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
gi|343970123|gb|EGV38321.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
Length = 470
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/433 (41%), Positives = 242/433 (55%), Gaps = 51/433 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ + D A L + P +P+ ++H++Q+ MI ++I+N
Sbjct: 73 KIIARAAENGETIGELTERFIRAMNEDAAALGVIRPDVEPKATEHVQQMLGMIQRLIDNG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAK GEP
Sbjct: 133 KAYAADNGDVYYAVREFATYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA----CQ- 175
+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQSC A C
Sbjct: 193 AWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQSCGAHGGSCGH 252
Query: 176 --------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 227
+S+V YW+HNG + +NEKMSKSLGNFFTIR++ E+Y +R F++ AHYR
Sbjct: 253 NRSGGKAIESHVKYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYR 312
Query: 228 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 287
SPLNYS L+ A A+ +Y L++ +P E +N A D + F A
Sbjct: 313 SPLNYSDAHLNDAKGALTRLYTALKN-----TPPAEFA----VNENANDYTRR----FFA 359
Query: 288 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 347
M+DD T + F+ A N + K NE+ L+ L
Sbjct: 360 AMNDDFGTVEAIAVLFELA--------NEVNKTNS---------------NELAGCLKAL 396
Query: 348 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 407
G + G Q+ L+ E++ LIE+R AR K++++SD+IR L +
Sbjct: 397 GSI-IGLLQRDPQEFLQGGSVSDGLSNEEIESLIEQRKQARAEKNWAESDRIRDLLNAEN 455
Query: 408 IALMDMGKETIWR 420
I L D T WR
Sbjct: 456 IILEDGAGGTTWR 468
>gi|352101164|ref|ZP_08958587.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
gi|350600648|gb|EHA16709.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
Length = 468
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 239/421 (56%), Gaps = 36/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA++ GE+ +L+ R D A L LPPT++PR + H++ I MI +I
Sbjct: 76 KILKRADENGESITALTERMIAAMHEDEARLFVLPPTHEPRATGHIDDIVAMIETLIAKG 135
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++ V K NYG+L+ ++L++ R+G RV VD K +P DF LWKAAK GE
Sbjct: 136 FAYAADNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKEDPLDFVLWKAAKPGEA 195
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA + V+
Sbjct: 196 HWSSPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQSEAATGKTYVN 255
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V N EKMSKSLGNFFTIR + + P +R L+++HYRSP+NYSV L A
Sbjct: 256 TWMHAGAVRVNKEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASHYRSPINYSVDSLTEA 315
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ + + A + R+ F M DD NT L
Sbjct: 316 RKSLTRLYTALEGVDT--------------DAIASSEASPYRERFTQVMDDDFNTPEALA 361
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ + +N K++QP + ++ E+K++ ILGLL P + +
Sbjct: 362 VMFE-----LAREVNRAKQEQPDEAA--------RLGGELKQLGAILGLLQQAPQIFLKG 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
QQ + L+E ++ I +R A+ NKDF+++D IR +L+ GI L D + T
Sbjct: 409 TQQ------QGMPLSESEIEAKIAQRIEAKANKDFAQADAIRDELSALGIILKDSREGTS 462
Query: 419 W 419
W
Sbjct: 463 W 463
>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|109894926|sp|Q1QC19.1|SYC_PSYCK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 488
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 248/425 (58%), Gaps = 29/425 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE +L+ R+ D L CL P +PR +DH+++++ MI +++ND
Sbjct: 85 KIITRAAENGEEIGTLTQRFITAMHEDATALGCLSPDAEPRATDHIDEMQQMIETLVSND 144
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++AV+ +YG+LS + L++ +AG RV V++ KRNP DF LWKAAK EP
Sbjct: 145 YAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVEVENDKRNPFDFVLWKAAKPDEP 204
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W S WG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS AA
Sbjct: 205 QWASAWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQFPHHENEIAQSEAATGCEYAR 264
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + + EKMSKSLGNFFTIR + +Y P +R FL+S+HYRS +N+S LD +
Sbjct: 265 NWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYLPETVRFFLLSSHYRSQVNFSDSALDES 324
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKT-----ARINPAAEDCINKLRDEFHARMSDDLNT 295
+++ +YQ L+ E Q+ GK A IN A + + +F M+DD N+
Sbjct: 325 HNSLSRLYQALKVAE------QQKGKVLIIDEALINNAYASAVGQ---DFIKAMNDDFNS 375
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
S ++ F + +N K Q +E+ ++ +K + + L +L
Sbjct: 376 STAISVLFG-----LARDINKASKAQD-------VETAWQLAQHLKALAQTLNILQQ-PV 422
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
+ LQ + + + + LT+E + LI ERA A+ NK+F+++D+IR L GI L D
Sbjct: 423 QQFLQAVIGEVAEDS-LTDEAIDGLIIERADAKTNKNFARADEIRVQLKEAGIELEDSRA 481
Query: 416 ETIWR 420
T WR
Sbjct: 482 GTTWR 486
>gi|406892373|gb|EKD37740.1| hypothetical protein ACD_75C01015G0004 [uncultured bacterium]
Length = 490
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 239/422 (56%), Gaps = 14/422 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + + L+ R+ +E+ VDM L P +P+ ++H+ ++ +I ++I+
Sbjct: 74 KIIARAAEQQTSAEELAARFIREFYVDMDKLGINRPDIEPKATEHISEMIALIEELISKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY DV++ V+ P+YG+LS + +E+ +AG R++++ +KRNP DF LWK +K GEP+
Sbjct: 134 KAYPSGNDVYYIVDSFPDYGKLSKRNVEDMQAGARISINEQKRNPLDFVLWKGSKPGEPT 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS + +
Sbjct: 194 WESPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQDLIFPHHENEIAQSEGVHGKAFANL 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+G VT +EKMSKSLGNF TIR I YHP LR F+ S HYR+PL++S + A+
Sbjct: 254 WIHHGFVTIRDEKMSKSLGNFLTIRDILTHYHPEVLRFFIFSTHYRNPLDFSESAMQDAT 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED----CINKLRDEFHARMSDDLNTSH 297
+ +Y+ C A+ A + D + + F M +D NT+
Sbjct: 314 AGLERLYE----CVAAVDRLDPQKSGANVASIFTDNDRQLLESMESRFQQAMDNDFNTAQ 369
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
G F D +K IN L P S +E L+K N ++++ I+G+L A S
Sbjct: 370 -AQGIFFDTVKTINRICRAL----PAVPSASDVEFLKKCANNLRKLADIMGILREDAES- 423
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
L K+K + L + LI ER R K++++SD+IR L + I L D T
Sbjct: 424 FLAAGKNKMISEGGLDVNAIEALIAERNQCRSAKNWARSDEIRDLLLAQNIELKDGPNGT 483
Query: 418 IW 419
W
Sbjct: 484 TW 485
>gi|94265990|ref|ZP_01289713.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
gi|93453456|gb|EAT03872.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
Length = 494
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/431 (39%), Positives = 247/431 (57%), Gaps = 17/431 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + + LS R+ Q + DMA L PPT +P+ ++H+ ++ +I ++I
Sbjct: 74 KIIKRAAEQQTSCQELSQRFIQAFHEDMAALGTEPPTLEPKATEHLPEMIALIEELIAKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F V YG+LS + L+ R+G R+AV+ K +P DF LWK +K EP+
Sbjct: 134 LAYPAGGDVYFRVRNFTEYGKLSHRALDEMRSGARIAVNELKEDPLDFVLWKGSKPEEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAM YL FDIHGGG DL+FPHHENEIAQS A ++
Sbjct: 194 WESPWGPGRPGWHIECSAMGRKYLGETFDIHGGGKDLVFPHHENEIAQSEGATGKPFANF 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+G VT +EKM+KSLGNF TIR + ++Y LR L S HYR+P++YS + A
Sbjct: 254 WIHHGFVTIKDEKMAKSLGNFLTIRDVLKQYPAEVLRLLLFSTHYRNPVDYSEAAMADAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHG---KTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ +Y L A+ G T+ I ++ L +FH M D N++
Sbjct: 314 TALSRLYAAL----AAVGKLPAGGAPEATSVITAKDRQKLDNLESDFHQAMDIDFNSAKA 369
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYS 356
L G F D +K IN +++ P +E LR +++E+ I GLL P AY
Sbjct: 370 L-GRFFDTVKIINK----VRQALPATPATRDLELLRDSAAKLRELGGIFGLLQEDPAAY- 423
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
L + +++ L ++T ++ +L+ +R AR+N D++++D+IR L K IA+ D
Sbjct: 424 --LARRQERLLAGLDITPGEIEKLLAQRQTARQNGDWAEADRIRDLLAAKKIAIKDGPDG 481
Query: 417 TIWRPCVLVEQ 427
T W + V Q
Sbjct: 482 TSWEVQLSVHQ 492
>gi|308450233|ref|XP_003088225.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
gi|308248740|gb|EFO92692.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
Length = 364
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 231/396 (58%), Gaps = 41/396 (10%)
Query: 28 DMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQ 86
D +L CL P PR +++++Q+++MI ++N AY GDV+F VEK NYGRLSG+
Sbjct: 4 DAENLGCLAPDEAPRATNYIDQMQNMIGNLVNKGTAYPSANGDVYFEVEKFENYGRLSGR 63
Query: 87 RLENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 144
+L++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS
Sbjct: 64 KLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCC 123
Query: 145 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 204
L + FDIHGGG DL+FPHHENEIAQS AA + V+YWMH G + + EKMSKSLGNFFT
Sbjct: 124 LGNHFDIHGGGSDLLFPHHENEIAQSEAATDEQYVNYWMHVGFINVDGEKMSKSLGNFFT 183
Query: 205 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 264
IR + E++HP +R+F++S+HYRS +++S L A F ++ + +
Sbjct: 184 IRDVMEKFHPEVIRYFIVSSHYRSRVDFSDFALKEAK-LRFLVF---------IMHLKRI 233
Query: 265 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 324
K+ I P M DD NTS + F+ I LN K++
Sbjct: 234 NKSMAIKP-------------QTSMRDDFNTSEAIAVLFE-----IIKELNRAVKEENAA 275
Query: 325 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 384
Q +LR + N ILGL+ + + +AL L+E D+ I++R
Sbjct: 276 QSTLYYSTLRHLTN-------ILGLVQYNVDDFLKSDIGQEALG---LSEADIEDFIQQR 325
Query: 385 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
A+KNKDF+++D+IR L +G+ L D + TIWR
Sbjct: 326 VDAKKNKDFARADEIRQSLLAQGVVLEDTRQGTIWR 361
>gi|168181842|ref|ZP_02616506.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|237796964|ref|YP_002864516.1| cysteinyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
gi|259511826|sp|C3KVS3.1|SYC_CLOB6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|182674897|gb|EDT86858.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|229261308|gb|ACQ52341.1| cysteine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
Length = 465
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/419 (38%), Positives = 242/419 (57%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G L +R+ +EY D DL T PR ++ M++I ++ +I
Sbjct: 72 KMIKKANEEGTTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMKEIIKFVSDLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA+WK+ K EP+
Sbjct: 132 YAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFAIWKSQKPEEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQSEARTGKQFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +N+S+ LDS
Sbjct: 252 WLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQINFSMELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ +Y ++ + E L + G D + K ++++ +M DD NT+ ++
Sbjct: 312 AALDRLYNSINNLENLLDEVKNEGLRDE-ELKYRDELQKYKEKYIEKMDDDFNTADAISV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D ++ +N+++ + K+ + L LI L G+ +LQ+
Sbjct: 371 IF-DLIRDVNTNITIESSKELVKYALDLIREL-------------------GSPLGILQK 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+L EE++ +LI+ER ARK KD++ +D+IR DL +GI L D + W+
Sbjct: 411 STKASL------EEEIERLIQERQKARKEKDWALADKIRDDLKERGIVLEDTPQGVRWK 463
>gi|262373040|ref|ZP_06066319.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262313065|gb|EEY94150.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 473
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 255/422 (60%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ L+ R+ + D A+L C P P+ +++++Q+++MI+ +++
Sbjct: 75 KIIARANENGESIQQLTARFIEAMNEDAANLGCAAPDEAPKATEYIDQMQNMISNLVDKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPASNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + + +Q+ ++ + + + F+ M DD NT+
Sbjct: 315 EAKTALSRFYHSFK-------AYQQTYGQKTVDALDQSFVER----FNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ +Q L +LR++ N ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQAEQATVLYSTLRQLTN-------ILGLVQHDVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ ++ I++R A+K KDF+K+D IR L +G+ L D + TI
Sbjct: 412 KSDIGQEALT---LSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLDQGVVLEDTRQGTI 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|253995884|ref|YP_003047948.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
gi|253982563|gb|ACT47421.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
Length = 466
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/430 (41%), Positives = 238/430 (55%), Gaps = 45/430 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E L+ R+ D A L L P +P+ ++ ++ + MI +I+
Sbjct: 73 KIIKRANENNETIAQLTQRFIDAMDEDSAKLGVLRPDLEPKATEFVDGMLSMIAALIDKG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDVF++V YG+LSG+ LE+ RAGERV VDS K++P DF LWKAAK GEP
Sbjct: 133 FAYPAANGDVFYSVSSFQGYGKLSGKSLEDLRAGERVEVDSFKKDPMDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA------- 173
SW+SPWG GRPGWHIECSAMS+H+L FDIHGGG DL FPHHENEIAQS AA
Sbjct: 193 SWESPWGKGRPGWHIECSAMSSHHLGQHFDIHGGGQDLQFPHHENEIAQSEAAHSHDGKP 252
Query: 174 CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYS 233
CQ V+YWMHNG V ++EKMSKSLGNFFTIR + E+Y +R F++ AHYRSPLNYS
Sbjct: 253 CQ--MVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLEQYDAEVIRFFILRAHYRSPLNYS 310
Query: 234 VLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDD 292
L+ A A+ +Y L+ +V+ +H AR F M DD
Sbjct: 311 DQHLNDAKLALTRLYTALRGVDVSDDAIDWQHPYAAR---------------FKLAMDDD 355
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT + F D +N K K + L +K + +LGLL
Sbjct: 356 FNTPEAMAVLF-DLANEVN------KTKSTEAAGL------------LKGLASVLGLLSR 396
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+ + + E DV +I +R A++ K+F+++D+IR +L GI L D
Sbjct: 397 KSDEFLQAKTNANGAANDGAAELDVDAMIVKRLEAKQAKNFAEADRIRKELAEAGIILED 456
Query: 413 MGKETIWRPC 422
+ T WR
Sbjct: 457 TPQGTTWRSA 466
>gi|387813875|ref|YP_005429358.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338888|emb|CCG94935.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 463
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/422 (42%), Positives = 243/422 (57%), Gaps = 37/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+RRA++ GE L++R + D A L L P +PR + ++ I MI ++I
Sbjct: 72 KILRRADENGEVYTDLTDRMIRAMHEDEAKLGVLSPNDEPRATAFIDDIIAMIQKLIAGG 131
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV+FAVE P+YG+LS ++LE+ AG RV V KR+PADFALWKAAK GE
Sbjct: 132 HAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQEAKRSPADFALWKAAKPGEV 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQS A + V
Sbjct: 192 SWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFPHHENEIAQSECATGHTFVH 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS ++YS L A
Sbjct: 252 TWMHAGAIRVNKEKMSKSLGNFFTIREILEKYPAEVVRYFLVSSHYRSQVDYSEDNLAEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y L+ + P K A + D F M DD NT+ +
Sbjct: 312 GRTLTKLYHALR----GIVP----AKGADVAETDHD------RRFAEVMDDDFNTAGAIA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
L + + +N +++ + E+ ++ + + +LGLL P A+ +
Sbjct: 358 -----VLHAVANDINHYRREGDE-------EAAKRSAAVLVRLGAVLGLLQQNPEAFFQ- 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
A +ELT ED+ +I+ RA ARK KDF+++D+IR DL KGI L D + T
Sbjct: 405 -------ADTGSELTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKGIILDDSREGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|410454410|ref|ZP_11308349.1| cysteinyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
gi|409932225|gb|EKN69192.1| cysteinyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
Length = 465
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 242/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR AN LGE+ ++++R+ Y D++ L C PRV ++M+ I D I +++ D
Sbjct: 74 KLIRAANQLGEDVPTIADRFINAYFEDVSALGCEKADVHPRVMENMDIIVDFIQKLVEKD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F + YG+LS Q +++ + G R+ V +K++ DFALWKAAK GE
Sbjct: 134 FAYESEGDVYFRTRRFDEYGKLSHQSIDDLQVGARIEVGDKKQDDLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 194 WDSPWGPGRPGWHIECSAMAKKYLGETIDIHAGGQDLTFPHHENEIAQSEALSGKLFSRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD--- 238
WMHNG++ +NEKMSKSLGNF + I +R++P LR F++S HYR+P+NYS L+
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFVLVHDIIKRHNPQVLRFFMLSVHYRNPINYSEELLENTK 313
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+A + + YQ L+ + A + ++ N D I L+ F M DD NT+
Sbjct: 314 AAYERLTTSYQNLKHRKEASTDLTDN------NQEWLDKIAALQGSFVEAMDDDFNTALA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ + + ++ +L+K + IE + N+ +E+ R+LGL
Sbjct: 368 ISVLFELSKQ---ANYYLLEKN-------TAIEVIDAFTNQFEELFRVLGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L E+ +E++ LIE+R ARK+++F SDQIR L I L D + T
Sbjct: 409 -------TLGSEEMLDEEIDALIEKRNQARKDRNFQLSDQIRDQLKEMNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|406040789|ref|ZP_11048144.1| cysteinyl-tRNA ligase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 473
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 250/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE L+ R+ D A L C P P+ +++++Q+++MI ++ N
Sbjct: 75 KIISRANENGETIQQLTARFITAMNEDAASLGCAEPDESPKATEYIDQMQNMIGTLVENG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV++ V K YGRLSG++L++ +AG ERV V+ K++P DF LWK AKA
Sbjct: 135 TAYPSSNGDVYYEVTKFAKYGRLSGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKAN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS AA +
Sbjct: 195 EPSWQSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQSEAATGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDTALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + E Q +G+ ++ ++ + F++ M DD NT
Sbjct: 315 EAKTALTRFYHAFKAYE------QTYGQI-----HSDQLDHEFIERFNSAMRDDFNTPEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F +N LN K+Q +Q +LR + ILGL+ +
Sbjct: 364 MAVLFD-----LNRELNRAVKEQCAEQAALYYATLRHLTT-------ILGLVQHNVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L ++++ LI++R A+K KDF+K+D IR L KG+AL D + T+
Sbjct: 412 KSDIGQQALS---LNDDEIEALIQQRHDAKKAKDFAKADGIRQSLLEKGVALEDTRQGTV 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|431792448|ref|YP_007219353.1| cysteinyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782674|gb|AGA67957.1| cysteinyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 477
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/428 (40%), Positives = 238/428 (55%), Gaps = 37/428 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R N+ G +PL L+ +Y +EY D L + T P+ +DH+ ++ ++I + +
Sbjct: 74 KIINRGNEEGIDPLELAQKYIEEYFKDAKALNLMTATIHPKATDHIPEMIEIIKGLEESG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY VEGDV+FAV+K P+YG+LSG+ E+ +AG RV V+ RK NP DFALWK+AK GEP
Sbjct: 134 LAYAVEGDVYFAVDKLPDYGKLSGRNFEDMQAGARVEVEERKHNPMDFALWKSAKPGEPF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W+SPWG GRPGWHIEC+AMS YL + FDIHGGG DL+FPHHENEIAQS +
Sbjct: 194 WESPWGKGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIAQSEGYLHGETFAR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYRSPL++ L A
Sbjct: 254 YWMHNAFLTINQQKMSKSLGNFFTVREILEHFSGEVIRFYLLGTHYRSPLDFDDENLQMA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL-------RDEFHARMSDDL 293
+ + +++ + AL HG+ PA E KL + EF + M DD
Sbjct: 314 QKGLERLQTSIRLADEALG---RHGE----KPADEANDQKLIAAAEEAQREFESAMDDDF 366
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG--LLP 351
N++ F+ K IN+ + L+K + E+ +LG L
Sbjct: 367 NSALAYASLFELG-KVINAHVQAYPYGSA---------GLQKARATLWELADVLGFDLAH 416
Query: 352 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
P +E + D+ + L+E RA ARK KD+ SD IR L GI L
Sbjct: 417 PANSAEAGNEKLDQVMDL----------LLEVRAIARKKKDWEMSDLIRDRLKDLGIVLE 466
Query: 412 DMGKETIW 419
D + W
Sbjct: 467 DTPQGARW 474
>gi|170727456|ref|YP_001761482.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
gi|229558789|sp|B1KLU0.1|SYC_SHEWM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169812803|gb|ACA87387.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
Length = 459
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 235/420 (55%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ SL+ R E D L P ++PR + HM +I +M+ ++I +
Sbjct: 73 KIIKRAAENKESCDSLTERLIGEMHKDFDSLNMKRPDFEPRATLHMAEIIEMVEKLIEKE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF LWK +K GEP
Sbjct: 133 HAYVSSNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDSKRDPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQSCCAHNTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDAATIRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D ++ + P AAE+ ++K F M DD NT +
Sbjct: 313 KSALARLYTALKDLDLTVEP-----------AAAENFVSK----FKQAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N + +++ + + +KE+ +LG+L S
Sbjct: 358 VLF-DMVREVN------------RLKVTDLAQASALAVRLKELAGVLGILEQDVDSFFKG 404
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ D AE+ E V LI ER AR KD+ +D R L G+ L D + T WR
Sbjct: 405 ESND-----AEVAE--VEALIAERNRARAEKDWPAADIARDGLNALGVILEDGPEGTTWR 457
>gi|397663742|ref|YP_006505280.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395127153|emb|CCD05341.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/425 (41%), Positives = 241/425 (56%), Gaps = 51/425 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ G + L+ +Y D L LPP ++PR + H+E I +I +++ D
Sbjct: 73 KIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF LWK AK GEP
Sbjct: 133 SAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQS AA +
Sbjct: 193 SWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKPFAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSPLNYS L +A
Sbjct: 253 YWLHVGMLQINGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSPLNYSEENLLNA 312
Query: 241 SDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ +YQ ++D + A S E+ +++F+ M+DD NT
Sbjct: 313 KKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQAMNDDFNTPVA 356
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L+ FQ L + K +L +L+ + ILG L
Sbjct: 357 LSVLFQ------------LAHEVNKSNSPALAHTLKNLAG-------ILGFL-------- 389
Query: 359 LQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
Q ++ ++ L EE+ L QLI ER AR ++++K+DQIRADL KGI L D
Sbjct: 390 --QKDPESFLQSGLAEEEKLVIEQLIAERLKARAERNWAKADQIRADLLSKGIELEDGAT 447
Query: 416 ETIWR 420
T WR
Sbjct: 448 GTTWR 452
>gi|15896425|ref|NP_349774.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|337738383|ref|YP_004637830.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
gi|384459893|ref|YP_005672313.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|21264018|sp|Q97ED6.1|SYC_CLOAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|15026246|gb|AAK81114.1|AE007813_1 Cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|325510582|gb|ADZ22218.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|336292051|gb|AEI33185.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
Length = 464
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 242/421 (57%), Gaps = 34/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I +AN+ G + L +RY +EY D L T PR ++++ +I D + + +
Sbjct: 72 KMIAKANNEGVSVKELGDRYIKEYYEDADGLNLERATCNPRATEYIGKIIDFVKGLQDEG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F YG+LSGQ LE+ AG +AVD RK++PADFALWK+ K GEPS
Sbjct: 132 YAYEIDGDVYFNTNAFKEYGKLSGQNLEDRMAGATIAVDDRKKSPADFALWKSEKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH G IDLIFPHHENEIAQS A Y
Sbjct: 192 WESPWGKGRPGWHIECSCMARDLLGDTIDIHAGAIDLIFPHHENEIAQSEARTGKPFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH ++ NNEKMSKSL NF T R I + Y +R FL+SAHYR+PLN++ +++A
Sbjct: 252 WMHAAYLNINNEKMSKSLNNFLTARDILKEYDAEVIRLFLLSAHYRTPLNFTEESIEAAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSHIL 299
++ +Y T+ + L+ TA N +E ++ R++F +M DD NT+ +
Sbjct: 312 TSLERLYNTINNLGSLLN------NTAESNDDSEYLKALDSYREKFIEKMDDDFNTADGI 365
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F D K IN ++N K ++ +SL+ L K P G +L
Sbjct: 366 SVIF-DLAKDINININGKSSKAAVEKAISLMRELGK---------------PLG----IL 405
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q+++ L E+++ LIE+R ARKNKD++ +D+IR DL +GI L D + W
Sbjct: 406 QKVEKHNL------EDEIQNLIEQRQNARKNKDWALADKIRDDLKERGIVLEDTPEGIRW 459
Query: 420 R 420
+
Sbjct: 460 K 460
>gi|423507884|ref|ZP_17484451.1| cysteinyl-tRNA synthetase [Bacillus cereus HD73]
gi|449086756|ref|YP_007419197.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|402442671|gb|EJV74592.1| cysteinyl-tRNA synthetase [Bacillus cereus HD73]
gi|449020513|gb|AGE75676.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 465
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N I K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEIEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL ++++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELSKEELLDKEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|451979646|ref|ZP_21928061.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
gi|451763174|emb|CCQ89258.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
Length = 480
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 235/422 (55%), Gaps = 22/422 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + ++++Y + DM L PT +P ++H+ + MI ++
Sbjct: 74 KIINRAREQNVPWQEVTHKYIDAFYEDMDALNVERPTTEPLATEHIGDMIKMIEGLVKAG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+++V+ P YGRLS + +E+ +AG RV K++P DFALWK +K GEP+
Sbjct: 134 KAYPAEGDVYYSVKAFPEYGRLSKRNIEDMQAGARVEPGEHKKDPMDFALWKKSKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQSC V Y
Sbjct: 194 WDSPWGPGRPGWHIECSAMSYQLLGETFDIHGGGKDLVFPHHENEIAQSCGFTGKPPVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTIR I + +HP LR FL++ HYR P+++S L A
Sbjct: 254 WVHNGFVNINKEKMSKSLGNFFTIRDILKTFHPEVLRLFLLTNHYRGPIDFSDQYLKDAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--LRDEFHARMSDDLNTSHIL 299
+ Y+ E A +G A I AED + L +F M DD NT+ L
Sbjct: 314 KNLDRFYEFFAQAESAQG--SRNGGAAEI---AEDTLRSQPLLKKFDEAMDDDFNTAVAL 368
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSE 357
++ L+ +N L ++ + ++ + ++ ++LGL P Y
Sbjct: 369 ADMMEE-LRRLNKQLG---------EEGTDRDAFHRDAATLRHAGQLLGLFYRTPEEYKT 418
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
++ LK +L + QLI ER AAR +KDF+ +D+ R +L + G+ L D T
Sbjct: 419 EIRALKGGG---QDLDVARIEQLIAERQAARSSKDFATADRCRDELQKMGVVLKDTKTGT 475
Query: 418 IW 419
W
Sbjct: 476 TW 477
>gi|120599417|ref|YP_963991.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|166225307|sp|A1RL92.1|SYC_SHESW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120559510|gb|ABM25437.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
Length = 461
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 236/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L+ R E D L L P ++PR + H+ +I DM+ ++
Sbjct: 75 KIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEIIDMVELLLARG 134
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF LWK +K GEP
Sbjct: 135 HAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDFVLWKMSKPGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 195 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 255 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEDNLKQA 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ T PA E + +F A M DD NT +
Sbjct: 315 RSALERLYTAIKDVDL----------TVAAAPAEEFIV-----KFKAAMDDDFNTPEAYS 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K ++ +L ++ +VL +LG P
Sbjct: 360 VLF-DMVRDIN---------RLKATDIAKASALAVAMKQLADVLGLLGQDP--------- 400
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
A + E ++++V + LI ER AR KD+ +D R L G+ L D T
Sbjct: 401 ----DAFFKGEGSDDEVAEIEALIVERNRARSEKDWPAADVARNRLNELGVVLEDGPSGT 456
Query: 418 IWR 420
WR
Sbjct: 457 TWR 459
>gi|345018555|ref|YP_004820908.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392939598|ref|ZP_10305242.1| cysteinyl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
gi|344033898|gb|AEM79624.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291348|gb|EIV99791.1| cysteinyl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
Length = 466
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 237/422 (56%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + ++ +Y EY D +L T P+ ++H+E I + I +I+
Sbjct: 72 KIIKRAQEENVTTKEVAEKYIDEYFKDADNLGIKRATVHPKATEHIEDIIEFIKILIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV G+V+F K +YG+LS + +E +AG R+ ++ K+NP DF LWKA K GEP+
Sbjct: 132 YAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEEKKNPLDFVLWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL+FPHHENEIAQS AA + Y
Sbjct: 192 WDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPHHENEIAQSEAAYEQPFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G++ NNEKMSKS GNFFT+R+ITE+Y+P LR F++ AHYRSP+N+S+ ++ A+
Sbjct: 252 WMHIGYLNINNEKMSKSKGNFFTVREITEKYNPEVLRLFMLMAHYRSPINFSLDLMEQAN 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR---MSDDLNTSHI 298
A Y+ L + L K +N + + K + M DD NT+
Sbjct: 312 SA----YERLLNAVANLKHLANVCKDGGLNEEEKKLMEKFEEYKKEFEEAMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ A K N++L+ K+ + L + L + +LGL G
Sbjct: 368 ISVLFEMA-KTSNANLSRNSSKKLVEYILDMFLKLSE----------VLGLSYRGV---- 412
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
EL +E++L LIEER ARK K++ +D+IR L KGI L D +
Sbjct: 413 ----------ETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKGIILEDTPEGVR 462
Query: 419 WR 420
W+
Sbjct: 463 WK 464
>gi|342215232|ref|ZP_08707886.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
gi|341588729|gb|EGS32105.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
Length = 482
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/428 (43%), Positives = 242/428 (56%), Gaps = 33/428 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G +S+RY Y M L PRVS HME+I MIT +I+N
Sbjct: 75 KIINTSNGEGVAWNVISDRYIDAYYDVMDALHVRRADVYPRVSTHMEEIISMITTLIDNG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV++ VEK +YG+LSG+ L++ AG RV VD RK NP DFALWKAAK GEP
Sbjct: 135 YAYAVDGDVYYRVEKFEHYGKLSGRTLDDMEAGARVDVDDRKENPMDFALWKAAKPGEPF 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN--V 179
W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS C + + V
Sbjct: 195 WESPWGQGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQS-EGCSEHHPAV 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N EKMSKSL NFF ++ I E+Y ALR FL+S HYRSPL++S +LD
Sbjct: 254 RYWVHNGFITINQEKMSKSLNNFFLVKDILEQYSADALRFFLLSTHYRSPLDFSDERLDE 313
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR---DEFHARMSDDLNTS 296
A+ A+ +QT+ D + L E A + + R +EF A MSDD NT+
Sbjct: 314 ATKAI-ERFQTVIDNLLYLESRPE----GLCELEAAELLKNARNYEEEFEAAMSDDFNTA 368
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ T K IN ++ S I +++I K +L ILGLL G
Sbjct: 369 -LATAPIYGLAKEINIYYQSVQSCDGTVCH-STIGEVKEI---FKMMLDILGLLEEG--- 420
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEE----RAAARKNKDFSKSDQIRADLTRKGIALMD 412
K E + E+ QL+E R AR+ K + +D IR +L GI + D
Sbjct: 421 ----------WKGQETSNEEYNQLMEVILNIRQCAREQKQWGIADSIRDELANIGIIIED 470
Query: 413 MGKETIWR 420
+ W+
Sbjct: 471 SPQGARWK 478
>gi|315649724|ref|ZP_07902808.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
gi|315274912|gb|EFU38288.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
Length = 468
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 235/419 (56%), Gaps = 26/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+A G +++++ Q Y D+ L T PRV+D+ME I + I ++++ D
Sbjct: 74 KMIRKAEQTGTTVPEVADKFIQAYYEDLDGLGIPRATLNPRVTDNMENIIEFIQELVDRD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDVF+ K +YG+LS Q L+ + G R+ VD RK NP DF LWKAAK GE
Sbjct: 134 FAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVDKRKENPEDFVLWKAAKPGEIY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ YL DIHGGG DL FPHHE E+AQS A +Y
Sbjct: 194 WSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQFPHHECEVAQSEALTGKPLANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGN ++++ E+Y A+R+F++S HYR+PLNYS +D A
Sbjct: 254 WMHNGYIRINNEKMSKSLGNGVLVKELREQYTKEAVRYFMLSTHYRNPLNYSDEVMDQAQ 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++V + + E LS K ++ I+ + EFH +M DD NT +T
Sbjct: 314 NSVERLANAAANIEHRLST-AIGSKDDEVSQEVAGKISAVLGEFHQKMQDDFNTPDAITA 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
FQ A S N L K+ L E LR NE+ VLRI+
Sbjct: 373 MFQWA-----SEANQL-LKEASIPAADLHEVLRAF-NEMNGVLRIVN------------- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+L +E++ LI ER ARKNK+++++D+IR L +GI L D + WR
Sbjct: 413 -----TGTGDLLDEEIEALIAERIEARKNKNWARADEIRDKLADEGIVLEDTAQGMRWR 466
>gi|421076448|ref|ZP_15537435.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans JBW45]
gi|392525459|gb|EIW48598.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans JBW45]
Length = 481
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/426 (40%), Positives = 247/426 (57%), Gaps = 27/426 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G ++NRY Y M L P VSDHM +I +++ ++
Sbjct: 74 KIIKAANNEGVTWDVIANRYIASYFEVMDKLNIRRADIYPTVSDHMTEIINIVEGLVAKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY+V+GDVF++VEK +YG+LSG+ +E+ +AG RV VD RK +P DFALWK+AK GEP+
Sbjct: 134 YAYIVDGDVFYSVEKFNDYGKLSGRDIEDMKAGARVDVDERKHHPMDFALWKSAKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN--V 179
W+SPWG GRPGWHIEC+AMS YL + FD HGGG DLIFPHHENEIAQS A ++ V
Sbjct: 194 WESPWGKGRPGWHIECTAMSLKYLGNSFDFHGGGSDLIFPHHENEIAQSEAFVEEGQPFV 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N EKMSKSLGNFF ++ I E Y P LR F++S HYRSPL++S +L
Sbjct: 254 RYWLHNGFITVNEEKMSKSLGNFFLVKDILEHYSPEVLRFFVLSTHYRSPLDFSDERLSE 313
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSH 297
A ++ + L+ + ++ A N A E + ++F M DD NT+
Sbjct: 314 AQRSL----ERLRTAVENVLQLEKLPDAANENKADELVKVAKQAEEDFCKAMDDDFNTAL 369
Query: 298 ILTGAFQDALKFINSSLNML---KKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
++ F A K IN N + K + + ++L ++ + N I+G+
Sbjct: 370 AISVMFGLA-KEINVYYNGVIAGKVQHTTEGYIALRQTYFMMAN-------IIGIF---- 417
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+Q+ K EL E+ + +IE R AR+NKD++ +D++R L GI L D
Sbjct: 418 ----VQEQTGKVDDSQELVEQLMDIIIEIRQHARQNKDWTVADKVRDSLGAVGIILEDSP 473
Query: 415 KETIWR 420
+ W+
Sbjct: 474 QGVRWK 479
>gi|228950638|ref|ZP_04112772.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228808989|gb|EEM55474.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 440
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 49 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 109 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 169 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 229 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 288
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N I K + F M+DD NT++
Sbjct: 289 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEIEKFQTAFEEAMNDDFNTANA 342
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 343 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 383
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL ++++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 384 -------ELSKEELLDKEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 436
Query: 419 WR 420
W+
Sbjct: 437 WK 438
>gi|146292587|ref|YP_001183011.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|166225305|sp|A4Y5H9.1|SYC_SHEPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145564277|gb|ABP75212.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
Length = 461
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 237/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L+ R E D L L P ++PR + H+ +I DM+ ++
Sbjct: 75 KIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEIIDMVELLLARG 134
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF LWK +K GEP
Sbjct: 135 HAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDFVLWKMSKPGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 195 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 255 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEDNLKQA 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ T PA E + +F A M DD NT +
Sbjct: 315 RSALERLYTAIKDVDL----------TVAAAPAEEFIV-----KFKAAMDDDFNTPEAYS 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K ++ +L ++ +VL +LG P
Sbjct: 360 VLF-DMVRDIN---------RLKATDIAKASALAVAMKQLADVLGLLGQDP--------- 400
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
A + E ++++V + LI ER AR KD++ +D R L G+ L D T
Sbjct: 401 ----DAFFKGEGSDDEVAEIEALIVERNRARSEKDWAAADVARNRLDILGVVLEDGPSGT 456
Query: 418 IWR 420
WR
Sbjct: 457 TWR 459
>gi|302390630|ref|YP_003826451.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
gi|302201258|gb|ADL08828.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
Length = 465
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 238/422 (56%), Gaps = 33/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L +R+ +EY D L PR ++H+E I + I +I
Sbjct: 72 KMIKRANEEGVTVKELGDRFIKEYFKDADALNIKRADVHPRATEHIEDIIEFIKVLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+FA K P YG+LSGQ LE AG RV +K++P DFALWKA K GEPS
Sbjct: 132 YAYEVGGDVYFAARKFPGYGKLSGQNLEELEAGARVEPGEKKKDPIDFALWKAKKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ +L DIHGGG DLIFPHHENE+AQS A +
Sbjct: 192 WPSPWGEGRPGWHIECSAMAMKHLGETIDIHGGGPDLIFPHHENEVAQSEAFTGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
+MH G++ NNEKMSKSLGNFFT+R I + Y+P LR ++S+HYRSP+N+S LD +
Sbjct: 252 FMHVGYLNINNEKMSKSLGNFFTVRDILKEYNPEVLRFLMLSSHYRSPINFSRELLDQSK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
A+ +Y L A+ + +N E+ + + +++F M DD NT+
Sbjct: 312 SALERLYNAL----YAMEHLENAAPERPLNGEEEEYLRRQLENKNKFKDAMDDDFNTAGA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D ++ N SLN + S E+++K + V E+ +LG + V
Sbjct: 368 IAVLF-DMIREFNVSLN----------ENSSREAVKKTKEMVLELGGVLGFF--SKFEPV 414
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L +E++ Q I+ER ARK K+++ +D+IR +L +GI L D
Sbjct: 415 -------------LLDEEIEQKIKEREEARKAKNYALADKIRDELRARGIILEDTPAGVR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|282857764|ref|ZP_06266973.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
gi|282584434|gb|EFB89793.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
Length = 474
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 245/421 (58%), Gaps = 25/421 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ + +Y D L ++ PR ++++ +I MI +II+N
Sbjct: 74 KMIARANRDGVTVQQLAEKTIADYYEDADALGIKRASFYPRATEYIPKIIAMIQRIIDNG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV +G VFF V+ P YG+LS Q L++ ++G R+ VD KR+P DF LWK K GEP+
Sbjct: 134 HAYVADGTVFFDVKSFPAYGKLSHQNLDDLQSGARIEVDDVKRSPLDFVLWKPQKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS L DIH GGIDL+FPHHENEIAQ+ AA V Y
Sbjct: 194 WESPWGLGRPGWHIECSAMSTDLLGDTVDIHTGGIDLVFPHHENEIAQTEAATGKPFVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HN ++ N EKMSKSLGNF T R +++ PLA+R F++ AHYRSP+N++ L+ A+
Sbjct: 254 WLHNEYILINAEKMSKSLGNFLTARAARQKFPPLAIRMFMLGAHYRSPINFTPEGLEQAA 313
Query: 242 DAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
AV + L++C ++ + G+T+ A ++ R +F A M DD NT+ +
Sbjct: 314 AAV----ERLRNCWSDLQFAKGGRLGETSAAGAALMAALDTFRADFTAAMDDDFNTAAAI 369
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
G +A+ +N L +K P + + + K ++ V+ I+G +
Sbjct: 370 -GVIFEAVTEVNKYLKGNEKLDP-----AAVAAAEKFFGDIDSVMGIIG---------IE 414
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q+ K+++ A E LI ER AARK +DF +SD IR +L +GI L D + T W
Sbjct: 415 QEKKEESGDEAARIE----PLIAERNAARKARDFKRSDAIRDELAAQGIILEDTPQGTKW 470
Query: 420 R 420
+
Sbjct: 471 K 471
>gi|253681484|ref|ZP_04862281.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
gi|253561196|gb|EES90648.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
Length = 466
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/419 (39%), Positives = 244/419 (58%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ L +R+ EY D L T PR ++ M++I + +I+
Sbjct: 72 KMIKKANEENVTVKELGDRFINEYYKDADGLNIKRATVNPRATEFMDEIISFVKDLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+ +K YG+LSGQ L++ +AG R+ VD RK++P DFA+WK K GEPS
Sbjct: 132 YAYEVDGDVYFSTKKFAEYGKLSGQNLDDLQAGARITVDERKQDPMDFAIWKNEKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS A +Y
Sbjct: 192 WESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQSEARNGKDFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+ ++ NN+KMSKSL NFFT R+I ERY +R F++SAHYR+PLN+S L+SA
Sbjct: 252 WMHSAYLNINNKKMSKSLNNFFTTREILERYDAEVIRLFMLSAHYRTPLNFSDELLESAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y ++ + E L + T + +N ++++ +M DD NT+ +
Sbjct: 312 ASNERLYNSIGNLERLLDEVKIEEMTG-VEKEYIKVLNSYKEKYIEKMDDDFNTADAIAV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K IN+ +N +S +++ N E++R LG +P G +LQ+
Sbjct: 371 IF-DLIKEINTHVNT--------------DSSKELVNYSLELIRELG-MPLG----ILQK 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L ++ LIE+R ARK++D++ +D+IR DL +GI L D + W+
Sbjct: 411 STIVDLN------AEIEGLIEQRQKARKDRDWALADKIRDDLKARGIVLEDTAQGVRWK 463
>gi|288574958|ref|ZP_06393315.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570699|gb|EFC92256.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 469
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 174/426 (40%), Positives = 247/426 (57%), Gaps = 34/426 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN++G L+ + +Y D L T+ PR ++H+E+I D++ ++ +
Sbjct: 74 KMINRANEMGITVQELAEKTIADYFEDADALGIKRATHYPRATEHIEEIIDLVKRLEESG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+G V+F V P YG+LS Q +E ++G R+ V+S KRNP DF LWKA K GEP+
Sbjct: 134 HAYEVDGVVYFDVSSFPEYGKLSRQNIEELQSGSRIEVNSSKRNPLDFVLWKAQKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL + DIH GG DL FPHHENEIAQ+ AA ++ V Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMAMKYLGNTLDIHSGGTDLTFPHHENEIAQAEAATEEVFVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HN ++ + EKMSKSLGNF T R+ + Y PLA+R F++SAHYRSP+N+ L A+
Sbjct: 254 WLHNEYILIDKEKMSKSLGNFMTAREARKHYSPLAIRMFMLSAHYRSPVNFGPEGLQQAT 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED----CINKLRDEFHARMSDDLNTSH 297
A+ + L +C S F+ + R + +D I + RD+F A M DD NT+
Sbjct: 314 AAL----ERLHNC---WSDFR-YAADNRPHSQGQDDIVESIKRHRDDFVAAMDDDFNTAG 365
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A+ +N L LS E ++ IE+ ++V I+GL+ G S+
Sbjct: 366 AIGHIFE-AVSTVNGHLK-------GNDSLSS-EGIKAIEDFFRDVDSIMGLI--GLDSD 414
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D E++ LI +R AR KDF+ SD IR L KG+ L D + T
Sbjct: 415 --GQDDDS---------EEIESLIRKREEARSAKDFATSDAIRDQLAAKGVILEDTPQGT 463
Query: 418 IWRPCV 423
W+ +
Sbjct: 464 KWKKKI 469
>gi|242398167|ref|YP_002993591.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
gi|242264560|gb|ACS89242.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
Length = 468
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 235/423 (55%), Gaps = 28/423 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ GE+P L+ ++ + +L DM L+ P PRV++H++ I + + ++
Sbjct: 66 KIIRRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQDIIEFVRKLEEKG 125
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V K YG+LS LE+ R G RV K+NP DFALWK AK GEP
Sbjct: 126 YAYGSSDGVYFEVRKYEKYGKLSKVNLEDLRKGVRVEPGEGKKNPEDFALWKKAKPGEPK 185
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQ+ A V Y
Sbjct: 186 WESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQTEACTGKEWVKY 245
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W H G V + EKMSKSLGNF TIR++ +RY P +R F++ HYRSPL+Y+ + A
Sbjct: 246 WFHTGFVMVSGEKMSKSLGNFVTIRELLQRYSPEVIRFFVLQKHYRSPLDYTEEGIQHAK 305
Query: 242 DAVFYIYQTLQDCEVALS----PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
+ + +Y T+++ +A+ PF+ + + D KL + M DD NT+
Sbjct: 306 NNLERLYNTIENIRIAMEKVEVPFKWEKEEFELYETIRDAKKKL----YEAMDDDFNTAE 361
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A +N+ L ++K PK+ L +I +EV G + E
Sbjct: 362 AMKPIFEVA-NAVNAYLTKVEK--PKESVLRKALEFFRIISEV-----------FGIFEE 407
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
++ K+ + +V R+A RK K+F +D+IRA L GI L D + T
Sbjct: 408 YFKEAKETKEEELIELLIEV------RSALRKQKNFELADKIRAQLRELGIQLEDTPQGT 461
Query: 418 IWR 420
IW+
Sbjct: 462 IWK 464
>gi|425744739|ref|ZP_18862794.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
gi|425490335|gb|EKU56635.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
Length = 473
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 252/422 (59%), Gaps = 29/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ L+ R+ D A+L C P P+ +++++Q++ MI +++
Sbjct: 75 KIIARANENGESIQQLTARFIDAMNEDAANLGCAAPDEAPKATEYIDQMQSMINTLVDKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F V K YGRLSG++LE+ +AG ERV V+ K++P DF LWK AK
Sbjct: 135 AAYPSSNGDVYFEVSKFDKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S + L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ Y + + +Q+ I ++ + + F+ M DD NT+
Sbjct: 315 EAKTALSRFYHSFK-------AYQQVYGQKTIETLEQNFVER----FNNAMCDDFNTAEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +N LN K++ +Q +L +LR + + ILGL+ +
Sbjct: 364 MAVLFE-----LNKELNRAVKEEQAEQATALYSTLRHLTH-------ILGLVQHDVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ +AL L++ D+ I++R A+K KDF+K+D IR L +G+ L D + TI
Sbjct: 412 KSDIGQEALS---LSDADIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQGTI 468
Query: 419 WR 420
WR
Sbjct: 469 WR 470
>gi|117921105|ref|YP_870297.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
gi|166225306|sp|A0KYM2.1|SYC_SHESA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117613437|gb|ABK48891.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
Length = 461
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 236/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L++R E D L + P ++PR + H+ +I DM+ +++
Sbjct: 75 KIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHIAEIIDMVERLLARG 134
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF LWK +K GEP
Sbjct: 135 HAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 195 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS +NYS L A
Sbjct: 255 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQINYSEENLKQA 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ ++ AE+ + K F A M DD NT +
Sbjct: 315 RAALERLYTAIKDVDLTVTA-----------APAEEFVAK----FKAAMDDDFNTPEAYS 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + +N LK Q + +K++ +LGL L
Sbjct: 360 VLFD-----MVREINRLKTTDMAQASAMAV--------AMKQLADVLGL---------LH 397
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D A + E ++++V + LI ER AR KD+ +D R L G+ L D T
Sbjct: 398 QAPD-AFFKGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLEDGPSGT 456
Query: 418 IWR 420
WR
Sbjct: 457 TWR 459
>gi|190568970|ref|ZP_03021871.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|190559894|gb|EDV13878.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
Length = 465
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ +++NR+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIANRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|389580502|ref|ZP_10170529.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
gi|389402137|gb|EIM64359.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
Length = 480
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 249/425 (58%), Gaps = 26/425 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+++N+ G++ +++ +Y E+ +M L L PT P+ ++H++ I + ++I+
Sbjct: 74 KIIKKSNETGDSCTAITTKYIDEFHNEMDALNVLRPTIAPKATEHIDHIIRFVQRLIDLG 133
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY VEG DV+F++ YG+LS + ++ +AG R+AVD +KR+P DF LWK AK GEP
Sbjct: 134 KAYHVEGGDVYFSISSFSEYGKLSHRNPDDMQAGARIAVDEKKRSPLDFTLWKPAKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS A+ V
Sbjct: 194 YWDSPWGKGRPGWHIECSAMSYEYLGESFDIHGGGKDLIFPHHENEIAQSEASFGVPFVK 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V NNEKMSKSLGNF I+++ Y P +R FL+S HYRSP++YS +
Sbjct: 254 YWIHNGFVDINNEKMSKSLGNFTMIKEVLADYSPEVIRMFLLSKHYRSPIDYSENSMREV 313
Query: 241 SDAVFYIYQTLQDCEVA-LSP----FQEHGKTARINPAAEDCINKLRDEFHARMSDDLNT 295
S A+ IY L+ + A ++P EHG P D + L D+F N+
Sbjct: 314 SVALDRIYGFLERLDKAGITPPDAAGGEHG------PLWADIVEALNDDF--------NS 359
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ + F DA+K N L+ + + + L I +++ ILG+ A
Sbjct: 360 AKAMAEIF-DAVKKGNKLLDDANDAPGESDR----KVLAGIYADIRSASEILGIFMICA- 413
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
++ KD+A+ ++ + LI ERA ARK+K+F+++D+IR L I L D +
Sbjct: 414 ADYFAAKKDRAMADQDVDSAMIDALIVERANARKSKNFARADEIRDQLQAMKIVLEDGPQ 473
Query: 416 ETIWR 420
T WR
Sbjct: 474 GTTWR 478
>gi|400288066|ref|ZP_10790098.1| cysteinyl-tRNA ligase [Psychrobacter sp. PAMC 21119]
Length = 486
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/428 (41%), Positives = 244/428 (57%), Gaps = 35/428 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + E L+ R+ D L C+PP +PR +D++++++D+I ++
Sbjct: 83 KIINRAAENNEPINELTERFITAMHDDELALGCIPPNQEPRATDYIDEMQDIIETLVAGS 142
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV++AV+ YG+LS + L+ +AG RV V++ KRNP DF LWKAAK GEP
Sbjct: 143 YAYAGNKGDVYYAVDSFAGYGKLSKRNLDEMQAGSRVEVENDKRNPFDFVLWKAAKPGEP 202
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS A+
Sbjct: 203 QWASPWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQFPHHENEIAQSEASTGCKYAR 262
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + + EKMSKSLGNFFTIR + +YH +R+FL+S+HYRS +N+S + LD A
Sbjct: 263 NWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYHSETVRYFLLSSHYRSQVNFSDVALDEA 322
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE-----FHARMSDDLNT 295
+++ +Y TL+ E Q+ G+T IN E IN F M+DD NT
Sbjct: 323 HNSLSRLYNTLKIAE------QQKGQTLEIN---EHLINDAYSSDAGYFFIQAMNDDFNT 373
Query: 296 S---HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
S +L G +D K I S + K Q QQ +L + L ++ V + L+ +
Sbjct: 374 SAATSVLFGLARDINKAIKSE-EVDKAWQWAQQLKALAQVLNILQQPVSQFLQAV----- 427
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
Q D LT+ + LI ERA A+ NKDF+++D++R L GI L D
Sbjct: 428 -----AGDQADDG------LTDAVIDGLIIERAEAKANKDFTRADEVREQLKAAGIELED 476
Query: 413 MGKETIWR 420
T WR
Sbjct: 477 SRAGTTWR 484
>gi|253999955|ref|YP_003052018.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
gi|253986634|gb|ACT51491.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
Length = 456
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 240/423 (56%), Gaps = 45/423 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ +L++R+ D A L + P +P+ ++H+ + DMI +I
Sbjct: 73 KIIKRAQENGESIQALTSRFITAMDEDAARLGVMRPDLEPKATEHITGMLDMIAALIEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDVF++V YG+LSG+ LE+ RAGERV +D KR+P DF LWKAAK GEP
Sbjct: 133 FAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQYKRDPMDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAM A +L FDIHGGG DL FPHHENEIAQS AA + V+
Sbjct: 193 SWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFPHHENEIAQSEAANGCTFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG + ++EKMSKSLGNFFTIRQ+ E+Y +R F++ A YRSPLNYS LD A
Sbjct: 253 YWMHNGFIRVDDEKMSKSLGNFFTIRQVLEKYDAEVVRFFILRAQYRSPLNYSDHHLDDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQ---EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
A+ +Y L+ +AL F + + AR F A M DD NTS
Sbjct: 313 RQALTRLYTALRG--LALPTFTIDWQQPQAAR---------------FKAAMDDDFNTSE 355
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
F+ + S +N +L L ++ + E
Sbjct: 356 AFAVLFE-----LASEVNRTASLADAALLKALAGLLGLLQRD----------------PE 394
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q + A R + +++ Q I+ R AR++K+F+++D+IR L +GI L D + T
Sbjct: 395 TFLQGGESAQGR---SADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLEDSPQGT 451
Query: 418 IWR 420
WR
Sbjct: 452 SWR 454
>gi|46579990|ref|YP_010798.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153567|ref|YP_005702503.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
gi|61216247|sp|Q72BQ5.1|SYC_DESVH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|46449406|gb|AAS96057.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234011|gb|ADP86865.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 485
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 235/419 (56%), Gaps = 9/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G ++ +Y + DM L L +P+ + H+ ++ + ++I
Sbjct: 72 KIIKRANEEGLTSQQVAEKYIDTFYEDMDRLNVLRADIEPKATGHILEMIALCEKLIAKG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DFALWKAAK GEP
Sbjct: 132 KAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGEEKEDPLDFALWKAAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS ++ DIHGGG DLIFPHHENEIAQ+ AA V
Sbjct: 192 SWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFPHHENEIAQTEAALDKPFVR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V + EKMSKSLGNF TIR I E Y P LR FL++ HYRSP++++ +D A
Sbjct: 252 YWMHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSPIDFTFDSMDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ IY+ L S + + AE + L F + DDLNT+ L
Sbjct: 312 EKSLKRIYEALSLARTERSRSKWSATPLPADVTAE--FDTLDRAFDEALEDDLNTAAALG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F ++ +N L K + + L+L+E L + + +VL + G P L
Sbjct: 370 HVFG-TIRLVNRLLED-KNLRKSAETLALLERLDGLVAKWMKVLGVFGREPEA----FLS 423
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
LK+ ++R + V L+EER + R KDF+++D IR +L GI + D +W
Sbjct: 424 DLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRDELAALGIEVRDTPSGAVW 482
>gi|403054114|ref|ZP_10908598.1| cysteinyl-tRNA ligase [Acinetobacter bereziniae LMG 1003]
Length = 457
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/391 (42%), Positives = 230/391 (58%), Gaps = 29/391 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L++R+ Q D +L CL P PR +D+++Q+++MI ++N
Sbjct: 75 KIIARANENGESITALTDRFIQAMNEDAENLGCLHPDEAPRATDYIDQMQNMIGHLVNKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV+F VEK YGRLSG++L++ +AG ERV VD K++P DF LWK AK
Sbjct: 135 AAYPSANGDVYFEVEKFARYGRLSGRKLDDMQAGASERVDVDVEKKHPFDFVLWKHAKEN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL+FPHHENEIAQS A+ +
Sbjct: 195 EPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFPHHENEIAQSEASTDEQY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH G + + EKMSKSLGNFFTIR + E++HP +R+F++S+HYRSP+N+S L
Sbjct: 255 VNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDFALK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A + Y A +Q+ + E + + F+ M DD NTS
Sbjct: 315 EAKTTLSRFYH-------AFKAYQQVYADLSTDVLDETFVER----FNIAMRDDFNTSEA 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ I LN K++ +Q +LR + N ILGL+ +
Sbjct: 364 IAVLFE-----IIKELNRAVKEENAEQATLYYSTLRHLTN-------ILGLVQYNVDEFL 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARK 389
+ +AL L+E D+ I++R A+K
Sbjct: 412 KSDIGQEALG---LSEADITDFIQQRVDAKK 439
>gi|257092145|ref|YP_003165786.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044669|gb|ACV33857.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 457
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 181/420 (43%), Positives = 236/420 (56%), Gaps = 38/420 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ L+NR+ D A L P ++PR ++++ Q+ ++I ++ N
Sbjct: 73 KIIKRALENKESIGDLTNRFIAFMNDDAAALGVEKPDHEPRATEYVPQMLELIGRLEKNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY V +GDV F+V K P YG+LSG+ L++ RAGERV VD K +P DF LWK A+ GEP
Sbjct: 133 LAYQVPDGDVNFSVRKFPGYGKLSGKALDDLRAGERVDVDGTKEDPLDFVLWKHAREGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQS A Q V+
Sbjct: 193 SWPSPWGDGRPGWHIECSAMSSVLLGEHFDIHGGGQDLQFPHHENEIAQSEGAHQCRFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V ++EKMSKSLGNF TI++I +Y P LR F++ AHYRSPLNYS LD A
Sbjct: 253 YWMHNGFVRVDDEKMSKSLGNFCTIKEILRKYDPEVLRFFILRAHYRSPLNYSDTHLDDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L +TA +P + D F M DD NT
Sbjct: 313 RQALSRLYTAL--------------RTANTDPPSIDWDEPHALRFRDAMDDDFNTPEACA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + + LN + + +L LR + + + R + A SE
Sbjct: 359 VLFD-----LAAELN-------RSKSATLAGQLRGLAGLLGLLGRDPQVFLQAAPSE--- 403
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
ELT E + LI ERAAA+ KD++ +D+IRADL G+ L D T WR
Sbjct: 404 --------GGELTAEQIESLISERAAAKAQKDYTAADRIRADLLSAGVVLEDGASGTRWR 455
>gi|261855684|ref|YP_003262967.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
gi|261836153|gb|ACX95920.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
Length = 454
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 178/420 (42%), Positives = 233/420 (55%), Gaps = 41/420 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + E+ SL+ RY + D A L CL PT +PR ++ + + MI +I
Sbjct: 73 KIIARAAENKESIRSLTERYIEAMHDDAAALGCLLPTAEPRATESVGDMVAMIESLIERG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V YG LS + ++ RAG RV +D K +P DF LWKA K G+P
Sbjct: 133 HAYRAANGDVYFDVSTFDRYGELSNRNPDDLRAGARVEIDEAKTDPLDFVLWKAEKPGDP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWD+P+GPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS A V+
Sbjct: 193 SWDAPFGPGRPGWHIECSAMSTRALGATFDIHGGGQDLQFPHHENEIAQSECATGHHYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N EKMSKSLGNFFT+ ++ +YHP +R F++S+HYRSPLNYS LD+A
Sbjct: 253 YWMHNGFVRINEEKMSKSLGNFFTVAEVMRQYHPEVIRLFVLSSHYRSPLNYSDQNLDAA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ Y ++D +P NP ++ F M DD NT L
Sbjct: 313 RASLTRWYTAIKDAPQNGTP----------NP-------EVMARFRGVMDDDFNTPEALA 355
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ S LN K + I+++ +I N LG P ++
Sbjct: 356 IVFEQI-----SELNRSKDANCA----ATIKAIGEILN--------LGQHDPESFLRWAP 398
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D +L++E + Q I ERA+AR NKDF+ SD+IR +L GI L D +T WR
Sbjct: 399 SSSD------QLSDEAIEQKIAERASARANKDFAASDRIRDELQAAGIVLEDKAGQTTWR 452
>gi|302390937|ref|YP_003826757.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
gi|302203014|gb|ADL11692.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
Length = 481
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 170/427 (39%), Positives = 249/427 (58%), Gaps = 29/427 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ L++R+ Y D L P+ ++H+ I +++ ++ +
Sbjct: 74 KMIKRANEEEIEIEELADRFITAYFEDTERLNIKQADVYPKATEHISDIIELVKKLEDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDVFFAV K +YG+LS Q LE +G RV V+ +K +P DF LWK +K GEPS
Sbjct: 134 YAYEVDGDVFFAVRKFADYGKLSNQELEELTSGSRVEVNDKKEDPLDFVLWKKSKEGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS YL +FD H GG+DL+FPHHENEIAQ+ A V+Y
Sbjct: 194 WESPWGTGRPGWHIECSAMSMCYLGEEFDFHTGGVDLVFPHHENEIAQNEAGVGSQVVNY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ + EKMSKSLGNFFT R I + Y LR FLIS HYRSP+N+S +LD+A+
Sbjct: 254 WLHNGYINVDGEKMSKSLGNFFTTRDILQDYSAEVLRFFLISKHYRSPINFSDAELDNAA 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL-------RDEFHARMSDDLN 294
++ Q LQ+ L + + A + P ++ + +L R++F M DDLN
Sbjct: 314 KSL----QRLQNTVNKLKDLLDRDR-ADLKPGNKEELQELEKKIKAKREKFEEAMDDDLN 368
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV-LRILGLLPPG 353
T+ + GA + K +N +N + Q ++I L K + KE+ ++LG+
Sbjct: 369 TA-LAIGALHELAKELNIVVN---DADFELNQANII-VLEKAYDTFKELSQQVLGI---- 419
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
L+ + LT + + L+E R AR+N+D+ +DQIR +L+ GI L D
Sbjct: 420 -------NLETEDDISDNLTSDLIGLLLEVRNKARQNQDWELADQIRDELSELGIILEDT 472
Query: 414 GKETIWR 420
+ T W+
Sbjct: 473 PQGTDWK 479
>gi|255527266|ref|ZP_05394147.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296187245|ref|ZP_06855641.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255509051|gb|EET85410.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296048116|gb|EFG87554.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 465
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 249/421 (59%), Gaps = 31/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RA + L +++ +EY D L T PR ++++ +I D + ++I+
Sbjct: 72 KMIKRAKEDNITVKELGDKFIEEYYKDADSLNIERATVNPRATEYINEIVDFVKELIDRG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F +K +YG+LSGQ LE+ +AG R++VD RK++P DFA+WK+ K GEP+
Sbjct: 132 YAYEVDGDVYFHTKKFKDYGKLSGQNLEDLQAGARISVDERKKDPMDFAVWKSQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENE+AQS A + Y
Sbjct: 192 WKSPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLAFPHHENEVAQSEARTGKTFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+ V NNEKMSKSL NFFT R+I E+Y +R F++S HYR+ +N+S+ L+S
Sbjct: 252 WMHSAFVNVNNEKMSKSLNNFFTAREILEKYDSDVIRLFMLSGHYRTQINFSMESLESMK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSHIL 299
A+ +Y ++ + E S +E + ++ E ++ ++++ +M DD NT+ +
Sbjct: 312 AAMDRLYNSISNLE---SLLEETKQEELMDQEVEYIKILDGYKEKYIEKMDDDFNTADAV 368
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F D ++ IN+++ + K+ + L+LI+ L K P G +L
Sbjct: 369 SVIF-DLIRDINTNVKIDSSKKLIKHCLNLIKELGK---------------PLG----IL 408
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q+ K L EE + LIEER ARK+K+++ SD+IR DL +GI L D + W
Sbjct: 409 QKSKKGNL------EEKIEALIEERQQARKDKNWALSDKIRDDLKEQGILLEDTPQGVRW 462
Query: 420 R 420
+
Sbjct: 463 K 463
>gi|376297517|ref|YP_005168747.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
Length = 485
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 248/424 (58%), Gaps = 19/424 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN++G+ ++ ++ E+ VDM L P+ +P+ ++H+ ++ + ++I+
Sbjct: 72 KIIKRANEVGKEASEIAEKFIGEFYVDMDRLNIERPSVEPKCTEHIPEMIALTQRLIDKG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V YG+LSG+ ++ +G R+A K +P DFALWKAAK GEP
Sbjct: 132 HAYATPSGDVYFKVRSFEGYGKLSGRNIDELESGARIAPGEEKEDPLDFALWKAAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWH+ECSAMS Y DIHGGG DL FPHHENE+AQS AA +
Sbjct: 192 FWESPWGKGRPGWHLECSAMSEKYADLPLDIHGGGQDLAFPHHENEVAQSEAATGKPFAN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N+EKMSKSLGNFFTIR I ++ P LR+FL++ HYRSPL++S L+ A
Sbjct: 252 YWVHNGFVQINSEKMSKSLGNFFTIRDILAKFLPETLRYFLLTMHYRSPLDFSFDALEEA 311
Query: 241 SDAVFYIYQTLQ--DCEVALSPFQEHGKTARINPAAEDCINKLRD---EFHARMSDDLNT 295
+ IY L D E+A +++ +P E+ + +L D F M+DDLNT
Sbjct: 312 EKGLKRIYSALNQIDEELARDKWKK-------SPFPEELVKELDDLEKHFAEAMADDLNT 364
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ GA I + + + K ++ + + +I+ ++ + +LG+
Sbjct: 365 A----GALGHVFSAIRLAGRVAEDKNLRKSEGGR-DLFARIKADMADWASVLGIFERKP- 418
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
+E L +L+D RA + V +L++ RA ARK+KDF++SD IR +L + + D +
Sbjct: 419 AEFLLELRDSRAARAGIDPAKVRELLDARAQARKDKDFARSDAIRDELAAMQVEVHDTPQ 478
Query: 416 ETIW 419
W
Sbjct: 479 GATW 482
>gi|313201928|ref|YP_004040586.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
gi|312441244|gb|ADQ85350.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
Length = 470
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 240/423 (56%), Gaps = 45/423 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ +L++R+ D A L + P +P+ ++H+ + DMI +I
Sbjct: 87 KIIKRAQENGESIQALTSRFITAMDEDAARLGVMRPDLEPKATEHITGMLDMIAALIEKG 146
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDVF++V YG+LSG+ LE+ RAGERV +D KR+P DF LWKAAK GEP
Sbjct: 147 FAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQYKRDPMDFVLWKAAKPGEP 206
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAM A +L FDIHGGG DL FPHHENEIAQS AA + V+
Sbjct: 207 SWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFPHHENEIAQSEAANGCTFVN 266
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG + ++EKMSKSLGNFFTIRQ+ E+Y +R F++ A YRSPLNYS LD A
Sbjct: 267 YWMHNGFIRVDDEKMSKSLGNFFTIRQVLEKYDAEVVRFFILRAQYRSPLNYSDHHLDDA 326
Query: 241 SDAVFYIYQTLQDCEVALSPFQ---EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
A+ +Y L+ +AL F + + AR F A M DD NTS
Sbjct: 327 RQALTRLYTALRG--LALPTFTIDWQQPQAAR---------------FKAAMDDDFNTSE 369
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
F+ + S +N +L L ++ + E
Sbjct: 370 AFAVLFE-----LASEVNRTASLADAALLKALAGLLGLLQRD----------------PE 408
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q + A R + +++ Q I+ R AR++K+F+++D+IR L +GI L D + T
Sbjct: 409 TFLQGGESAQGR---SADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLEDSPQGT 465
Query: 418 IWR 420
WR
Sbjct: 466 SWR 468
>gi|386313262|ref|YP_006009427.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
gi|319425887|gb|ADV53961.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
Length = 459
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 237/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L+ R E D L L P ++PR + H+ +I DM+ ++
Sbjct: 73 KIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEIIDMVELLLARG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF LWK +K GEP
Sbjct: 133 HAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDENKQNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ ++ AE+ I K F A M DD NT +
Sbjct: 313 RSALERLYTAIKDVDLTVAA-----------APAEEFIAK----FKAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K ++ +L ++ +VL +LG P
Sbjct: 358 VLF-DMVRDIN---------RLKATDIAKASALAVAMKQLADVLGLLGQDP--------- 398
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
A + E ++++V + LI ER AR KD+ +D R L G+ L D T
Sbjct: 399 ----DAFFKGEGSDDEVAEIEALIVERNRARSEKDWVAADVARNRLDILGVVLEDGPSGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|354558420|ref|ZP_08977675.1| cysteinyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353546898|gb|EHC16345.1| cysteinyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 478
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 166/419 (39%), Positives = 233/419 (55%), Gaps = 19/419 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R + G +PL+LS +Y +EY D L LP T P+ ++H+ ++ ++I +I
Sbjct: 74 KIIKRGLEEGVDPLTLSRKYIEEYFKDAKALHVLPATVHPKATEHIPEMLEIIQGLITKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+FAV+K P YG+LSG+ LE+ +AG RV VD RK +P DFALWK AK EPS
Sbjct: 134 LAYEVDGDVYFAVDKFPQYGKLSGRSLEDMQAGARVDVDERKNHPMDFALWKKAKPDEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W SPWG GRPGWHIEC+AMS YL + FDIHGGG DL+FPHHENEIAQS + +
Sbjct: 194 WKSPWGEGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIAQSEGYLEGKPFAH 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N +KMSKSLGNFFT+R+I + + LR +L+S HYRSPL++ L A
Sbjct: 254 YWMHNAFLTFNQQKMSKSLGNFFTVREILDHFSGEVLRFYLLSTHYRSPLDFDDENLRMA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ + +++ AL+ +N +F A M DD N++
Sbjct: 314 QKGLERLQTSIRLAAEALTKKGPVEIKLEMNEELVKASETAHRDFEAAMDDDFNSALAYA 373
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L + P L K + E+ +LG L+
Sbjct: 374 SLFE-----LGKHINTLLQDYPYASA-----GLAKARETLLELAGVLGF--------DLE 415
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ + + + E + + L+ R AR+ KD+ SD IR L GIAL D + W
Sbjct: 416 HPESQEVAQDEKLTQVMEVLLSVRMKARQKKDWETSDFIRDQLKEIGIALEDTPQGARW 474
>gi|331268391|ref|YP_004394883.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
gi|329124941|gb|AEB74886.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
Length = 472
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 169/425 (39%), Positives = 249/425 (58%), Gaps = 39/425 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ L +R+ +EY D L T PR ++ M++I + +I+
Sbjct: 78 KMIKKANEENITVKELGDRFIEEYYKDSDGLNIKRATVNPRATEFMDEIVAFVKDLIDKG 137
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+ +K YG+LSGQ LE+ +AG R+ VD RK++P DFA+WK K GEPS
Sbjct: 138 YAYKVDGDVYFSTKKFTEYGKLSGQNLEDLQAGARITVDERKQDPMDFAIWKNEKPGEPS 197
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS A + +Y
Sbjct: 198 WESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQSEARNGKAFANY 257
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+ ++ NN+KMSKSL NFFT R+I ERY +R F++SAHYR+PLN+S L+SA
Sbjct: 258 WMHSAYLNINNKKMSKSLNNFFTTREILERYDAEVIRLFMLSAHYRTPLNFSDELLESAK 317
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED------CINKLRDEFHARMSDDLNT 295
+ +Y ++ + E L +I ED +N ++++ +M DD NT
Sbjct: 318 ASNERLYNSIGNLERLLDE-------VKIEKMTEDEKEYTKVLNSYKEKYIEKMDDDFNT 370
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ + F D +K IN+ +N +S +++ N E++R LG +P G
Sbjct: 371 ADAIAVIF-DLIKEINTHVNA--------------DSSKELVNYSLEIIRELG-MPLG-- 412
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
+LQ K L +L E + LIE+R ARK+++++ +D+IR DL +GI L D +
Sbjct: 413 --ILQ--KSTML---DLNAE-IEGLIEQRQQARKDRNWALADKIRDDLKARGIVLEDTPQ 464
Query: 416 ETIWR 420
W+
Sbjct: 465 GVRWK 469
>gi|399889684|ref|ZP_10775561.1| cysteinyl-tRNA ligase [Clostridium arbusti SL206]
Length = 465
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 164/419 (39%), Positives = 238/419 (56%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I +A G L +R+ EY D L T PR ++ ++ I + + +++
Sbjct: 72 RMISKAKQDGITIKELGDRFISEYYKDADGLNIERATANPRATEFIDDIINFVKDLVDKK 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ EK YG+LSGQ LE +G R+ VD RK++P DFA+WK K GEP+
Sbjct: 132 FAYEIDGDVYFSTEKFEKYGKLSGQNLEELESGVRINVDERKKDPMDFAIWKKQKEGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ L DIH GG+DL+FPHHENEIAQS + +Y
Sbjct: 192 WKSPWGFGRPGWHIECSCMAHKLLGDTIDIHAGGMDLVFPHHENEIAQSESRNGKKFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+ ++ NN+KMSKSL NF T R E++ P +R ++SAHYR+ LNYS LDS
Sbjct: 252 WMHSAYLNINNQKMSKSLNNFLTARDALEKFDPEVIRFLMLSAHYRTQLNYSPDLLDSDK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ +Y ++ + E L + + +N RD++ +M DD NT+ ++
Sbjct: 312 SALERLYNSIDNLENLLGEVKFEKLKKEEKEYLNN-LNSYRDKYIEKMDDDFNTADAISV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D K INS++N+ K+ Q L+LI L K P G +LQ+
Sbjct: 371 IF-DLSKDINSNINIESSKEIIQTALNLIRELGK---------------PLG----ILQK 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ K L ++++ +LIEER AR+ K+F+ SD+IR DL KGI L+D + W+
Sbjct: 411 VTKKDL------DKEIEKLIEERQKAREEKNFALSDKIRDDLKAKGIVLLDTPQGVRWK 463
>gi|440785439|ref|ZP_20962196.1| cysteinyl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440218335|gb|ELP57557.1| cysteinyl-tRNA ligase [Clostridium pasteurianum DSM 525]
Length = 465
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 245/424 (57%), Gaps = 33/424 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I +AN G + L +++ EY D L T PR ++ + I + +++
Sbjct: 72 RMINKANQDGISIKELGDKFISEYYKDADGLHIERATANPRATEFIYDIISFVKDLVDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GD++F+ EK +YG+LSGQ LE +G R+ VD RK+NP DFA+WK K GEP+
Sbjct: 132 YAYEVDGDIYFSTEKFKDYGKLSGQDLEQLESGVRINVDERKKNPMDFAIWKKQKDGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECS M+ L DIH GG+DL+FPHHENEIAQS + +Y
Sbjct: 192 WESPWGPGRPGWHIECSCMAHKLLGDTIDIHAGGMDLVFPHHENEIAQSESRNGKKFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+ ++ NN+KMSKSL NF T R E++ +R ++SAHYR+ LNYS L+S+
Sbjct: 252 WMHSAYLNVNNQKMSKSLNNFLTARDALEKFDYEVIRFLMLSAHYRTQLNYSPELLESSK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
A+ +Y ++ + E L E +++ ++ ++ L RD++ +M DD NT+
Sbjct: 312 SALDRVYNSIYNLESLL----EKSTVSKLKDDEKEYLDNLKSYRDKYIEKMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F D ++ +NS+L++ K+ + +SLI L K P G +
Sbjct: 368 ISVIF-DIVRDVNSNLDINSSKEIVEASISLIRELGK---------------PLG----I 407
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ+ L+R ++ +LIEER ARK K+F+ +D+IR DL KGI L+D +
Sbjct: 408 LQKSTKVDLER------EIEKLIEERQKARKEKNFALADKIRDDLKDKGIILLDTPQGVR 461
Query: 419 WRPC 422
W+
Sbjct: 462 WKKA 465
>gi|365157349|ref|ZP_09353622.1| cysteinyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
gi|363625250|gb|EHL76292.1| cysteinyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
Length = 465
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 243/424 (57%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR A +LGE+ +L+NR+ + Y D+ L C PRV+++M+ I + I +
Sbjct: 74 KLIRAARELGEDVPTLANRFIRAYFEDVEALGCKRADIHPRVTENMDIIIEFIRTLEEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV++ K +YG+LS Q ++ + G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYEVDGDVYYRTRKFKDYGKLSHQSIDELKVGARIEVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ HYL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMARHYLGDTIDIHAGGQDLTFPHHENEIAQSEALSGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I +++ P ALR F++S HYR P+NYS L++A
Sbjct: 254 WMHNGYININNEKMSKSLGNFVLVHDIIQKHDPDALRFFMLSVHYRHPINYSEELLENAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKLRDEFHARMSDDLNTS 296
++ + + Q+ +H K A N D I KL DEF M DD NT+
Sbjct: 314 TSLERLKTSYQNL--------KHRKEASTNLTENDHEWIEKIQKLHDEFVKEMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F+ + + ++ +++K ++ +I + K E +++ +LGL
Sbjct: 366 NAISVLFELSRQ---ANYYLMEKHTSEK----VISAFMK---EFEDLFSVLGL------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
L+ E +E++ QLIE+R ARK ++F +D+IR L I L D +
Sbjct: 409 ---------KLEVNEWLDEEIEQLIEKRNQARKERNFQLADEIRDQLKNMNIILEDTPQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|417957999|ref|ZP_12600916.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
gi|343967391|gb|EGV35636.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
Length = 470
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 176/433 (40%), Positives = 243/433 (56%), Gaps = 51/433 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ + D A L + P +P+ ++H++Q+ MI ++I+N
Sbjct: 73 KIIARAAENGETIGELTERFIRAMNEDAAALGVIRPDVEPKATEHVQQMLGMIQRLIDNG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++AV + YG+LSG+ L++ RAGERV VDS KR+P DF LWKAAK GEP
Sbjct: 133 KAYAADNGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDSFKRDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA----CQ- 175
+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQSC A C
Sbjct: 193 AWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQSCGAHGGSCGH 252
Query: 176 --------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR 227
+S+V YW+HNG + +NEKMSKSLGNFFTI ++ E+Y +R F++ AHYR
Sbjct: 253 NRSGGKAIESHVKYWLHNGFIRVDNEKMSKSLGNFFTICEVLEKYDAEVVRFFILRAHYR 312
Query: 228 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA 287
SPLNYS LD A A+ +Y L++ +P E A + N F A
Sbjct: 313 SPLNYSDAHLDDAKGALTRLYTALKN-----TPPAEF--------AVSENANDYTRRFFA 359
Query: 288 RMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL 347
M+DD T + F+ L + K L L+ + ++
Sbjct: 360 SMNDDFGTVEAMAVLFE------------LANEVNKTNSTELAGCLKALGG-------VI 400
Query: 348 GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 407
GLL + L+ L+ ++ L+ E++ LI +R AR K++++SD+IR L +
Sbjct: 401 GLLQ----RDPLEFLQGGSVSDG-LSNEEIESLIAQRKQARAEKNWAESDRIRDLLNAEN 455
Query: 408 IALMDMGKETIWR 420
I L D T WR
Sbjct: 456 IILEDGAGGTTWR 468
>gi|229119752|ref|ZP_04249013.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
gi|228663653|gb|EEL19232.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
Length = 420
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 269 NGLERIKTAYSNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|326391118|ref|ZP_08212664.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325992817|gb|EGD51263.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 466
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 236/422 (55%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + ++ +Y EY D +L T P+ ++H+E I + I +I+
Sbjct: 72 KIIKRAQEENVTTKEVAEKYIDEYFKDADNLGIKRATVHPKATEHIEDIIEFIKILIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV G+V+F K +YG+LS + +E +AG R+ ++ K+NP DF LWKA K GEP+
Sbjct: 132 YAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEEKKNPLDFVLWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL+FPHHENEIAQS A + Y
Sbjct: 192 WDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPHHENEIAQSETAYEQPFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G++ NNEKMSKS GNFFT+R+ITE+Y+P LR F++ AHYRSP+N+S+ ++ A+
Sbjct: 252 WMHIGYLNINNEKMSKSKGNFFTVREITEKYNPEVLRLFMLMAHYRSPINFSLDLMEQAN 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR---MSDDLNTSHI 298
A Y+ L + L K +N + + K + M DD NT+
Sbjct: 312 SA----YERLLNAVANLKHLANVCKDGGLNEEEKKLMEKFEEYKKEFEEAMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ A K N++L+ K+ + L + L + +LGL G
Sbjct: 368 ISVLFEMA-KTSNANLSRNSSKKLVEYILDMFLKLSE----------VLGLSYRGV---- 412
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
EL +E++L LIEER ARK K++ +D+IR L KGI L D +
Sbjct: 413 ----------ETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKGIILEDTPEGVR 462
Query: 419 WR 420
W+
Sbjct: 463 WK 464
>gi|325267558|ref|ZP_08134210.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
gi|324980908|gb|EGC16568.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
Length = 487
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 234/434 (53%), Gaps = 53/434 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE L+ R+ D L L P +P+ ++H+ Q+ MI ++ N
Sbjct: 88 KIIARANENGETIGELTARFIAAMNEDSDALGVLRPDIEPKATEHIGQMIAMIEDLVANG 147
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD+ KR+P DF LWKAAK GEP
Sbjct: 148 KAYPAPNGDVYYAVREFAEYGQLSGKSLDDLRAGERVDVDANKRDPLDFVLWKAAKPGEP 207
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA----CQ- 175
SW+SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQSC A C
Sbjct: 208 SWESPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQSCGAHGGLCGH 267
Query: 176 ----------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAH 225
+S+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y P +R F++ AH
Sbjct: 268 DAPHAAGKRINSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYAPEVVRFFILRAH 327
Query: 226 YRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEF 285
YRSPLNYS LD A +++ +Y TL + + A +E N F
Sbjct: 328 YRSPLNYSDAHLDDAKNSLARLYNTLGNVQAAEFAVREDA-------------NDYTRRF 374
Query: 286 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 345
A M DD NT+ ++ F+ L + K L L+ +
Sbjct: 375 FAAMDDDFNTAEAMSVLFE------------LANEANKTGSAELAGCLKALGG------- 415
Query: 346 ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTR 405
LGLL + Q + L+ +++ LI +R AR+ K++++SD+IR L
Sbjct: 416 TLGLL-----QDDPQHFLQSGGEEGGLSADEIEALITQRKTARETKNWAESDRIRDLLAE 470
Query: 406 KGIALMDMGKETIW 419
I L D T W
Sbjct: 471 HKILLKDGADGTTW 484
>gi|167624689|ref|YP_001674983.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
gi|189082075|sp|B0TLV2.1|SYC_SHEHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167354711|gb|ABZ77324.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
Length = 459
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 180/425 (42%), Positives = 235/425 (55%), Gaps = 46/425 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ SL+ R E D L P +PR + H+ +I DM+ ++I D
Sbjct: 73 KIIKRANENNESCDSLTERLIAEMHKDFDSLNMARPDNEPRATQHIPEIIDMVERLIERD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF LWK +K GEP
Sbjct: 133 HAYVASSGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDTKRDPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMIDKEKMSKSLNNFFTIRDVLAHYDAATVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ IY L+D ++++ +P QE +F M DD NT
Sbjct: 313 KAALERIYTALKDLDLSVEAAPAQE-----------------FVAKFKTAMDDDFNTPEA 355
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D ++ IN + K ++ +L E+ +VL ILG
Sbjct: 356 YSVLF-DMVREIN---------RLKATDMAKASALGVALKELADVLGILG---------- 395
Query: 359 LQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
Q D K E ++++V + LI ER AR KD+ +D R L G+ L D +
Sbjct: 396 --QDVDTFFK-GEGSDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILEDGPE 452
Query: 416 ETIWR 420
T WR
Sbjct: 453 GTTWR 457
>gi|127513439|ref|YP_001094636.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
gi|187631636|sp|A3QFX9.1|SYC_SHELP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126638734|gb|ABO24377.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
Length = 459
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 237/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ +L+ R QE D L P ++PR + HM +I +M+ +++ D
Sbjct: 73 KIIKRATENGESCDALTERLTQEMYHDFDALNMKRPDFEPRATQHMPEIIEMVERLLERD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ + GDV F+V P YGRLSGQ L+ +AG RV VD KR+P DF LWK +K GEP
Sbjct: 133 HAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGARVEVDENKRDPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDASTVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ ++++ PA+E +F M DD NT +
Sbjct: 313 KAALERLYTALKGLDLSVEA----------APASEYVA-----KFKEAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK + + + + +K++ +LG +L+
Sbjct: 358 VLFDMA-----REINRLK--------VDDLAAASALGVSMKQLGDVLG---------ILE 395
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D K E ++++V Q LI ER AR KD++ +D R L G+ L D + T
Sbjct: 396 QDVDGFFK-GEGSDDEVAQIEALIAERNRARTEKDWAAADVARDGLNALGVILEDGPEGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|317152040|ref|YP_004120088.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942291|gb|ADU61342.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 485
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 173/433 (39%), Positives = 240/433 (55%), Gaps = 37/433 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN++G+ +++ ++ E+ VDM L L +P+ ++H+ ++ + ++I D
Sbjct: 72 KIINRANEVGKEAAAIAEQFIGEFYVDMDRLGVLRADVEPKCTEHIPEMIALTARLIGQD 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V YG+LSG+ ++ +G R+ K++P DFALWKAAK GEP
Sbjct: 132 HAYATPSGDVYFRVRSFAGYGKLSGRNIDELESGARIDPGEEKQDPLDFALWKAAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWH+ECSAMS Y DIHGGG DL FPHHENEIAQS AA +
Sbjct: 192 SWESPWGPGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFPHHENEIAQSEAATGKPFAN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+W+HNG V N+EKMSKSLGNFFTIR I +++ P LR+FL++ HYRSPL++S L+ A
Sbjct: 252 FWVHNGFVQINSEKMSKSLGNFFTIRDILDKFLPETLRYFLLTMHYRSPLDFSFDALEEA 311
Query: 241 SDAVFYIYQTLQDCEVAL-------SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDL 293
+ IY L + L SPF E TA + D I + + M DD+
Sbjct: 312 EKGIRRIYAALAQADAELAKTSWKKSPFPEE-MTAEL-----DAIER---HWAEAMEDDM 362
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVK-------EVLRI 346
NT+ L F S L + + + L E R +K EVL I
Sbjct: 363 NTAGALGHVF---------SAIRLAGRVTEDKTLRKAEGGRDFLLRIKADMAAWSEVLGI 413
Query: 347 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 406
G P G L +L+D RA + V L++ R AR++KDF+KSD IR +L
Sbjct: 414 FGRDPAG----FLAELRDNRAARAGIDPTRVQALLDARQQARQDKDFAKSDAIRDELAAM 469
Query: 407 GIALMDMGKETIW 419
+ + D + W
Sbjct: 470 HVEVKDTPQGATW 482
>gi|423399363|ref|ZP_17376561.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|423409861|ref|ZP_17387010.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-3]
gi|401644463|gb|EJS62153.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|401652401|gb|EJS69958.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-3]
Length = 465
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQSAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYIK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|329925602|ref|ZP_08280443.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
gi|328939731|gb|EGG36073.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
Length = 468
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 235/419 (56%), Gaps = 26/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+A G ++ ++ Y D+ L T PRV+D+ME I + I ++I+ D
Sbjct: 74 KMIRKAEQTGTTVPEVAEKFINAYYEDLDGLGIPRATLNPRVTDNMESIIEFIQELIDRD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDVF+ K +YG+LS Q L+ + G R+ VD RK NP DF LWKAAK GE
Sbjct: 134 FAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVDKRKENPEDFVLWKAAKPGEIY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ YL DIHGGG DL FPHHE E+AQS A +Y
Sbjct: 194 WSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQFPHHECEVAQSEALTGKPLANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGN ++++ E+Y A+R+F++S HYR+PLNYS ++ A
Sbjct: 254 WMHNGYIRINNEKMSKSLGNGVLVKELREQYTKEAVRYFMLSTHYRNPLNYSDEVMEQAQ 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++V + + E L K +++ D I+ + EFH +M DD NT +T
Sbjct: 314 NSVERLANAAANVEHRLGT-AIGSKDDQVSQDVADKISAVLVEFHEKMQDDFNTPDAITA 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
FQ A S N L K+ +L E LR NE+ VLRI+
Sbjct: 373 MFQWA-----SEANQL-LKEASIPAANLHEVLRAF-NEMNSVLRIVN------------- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
EL +E++ LI ER ARKNK+++++D+IR L +GI L D + WR
Sbjct: 413 -----TGTDELLDEEIEALIAERVEARKNKNWARADEIRDKLADEGIVLEDTAQGMRWR 466
>gi|160874741|ref|YP_001554057.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|378707994|ref|YP_005272888.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|418023622|ref|ZP_12662607.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
gi|187631635|sp|A9KWH4.1|SYC_SHEB9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160860263|gb|ABX48797.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|315266983|gb|ADT93836.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|353537505|gb|EHC07062.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
Length = 459
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 235/420 (55%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L+ R E D L L P ++PR + H+ +I DM+ ++
Sbjct: 73 KIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF LWK +K GEP
Sbjct: 133 HAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ ++ AE+ I K F A M DD NT +
Sbjct: 313 RSALERLYTAIKDVDLTVAA-----------APAEEFIAK----FKAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN L + Q ++L K++ +LGLL S+ +
Sbjct: 358 VLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGLL-----SQEPE 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
E+ E + LI ER AR KD++ +D R L G+ L D T WR
Sbjct: 400 AFFQGGGSDDEVAE--IEALIVERNRARTEKDWAAADVARNRLNELGVELEDGPSGTTWR 457
>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|109894925|sp|Q4FRZ9.1|SYC_PSYA2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 488
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 248/425 (58%), Gaps = 29/425 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE +L+ R+ D L C P +PR +D++++++ MI +++ND
Sbjct: 85 KIIARAAENGEEIGALTQRFITAMHEDATALGCQSPNAEPRATDYIDEMQQMIETLVSND 144
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++AV+ +YG+LS + L++ +AG RV V++ KRNP DF LWKAAK EP
Sbjct: 145 YAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVEVENDKRNPFDFVLWKAAKPDEP 204
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W S WG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS AA
Sbjct: 205 QWVSSWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQFPHHENEIAQSEAATGCEYAR 264
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + + EKMSKSLGNFFTIR + +Y P +R FL+S+HYRS +N+S LD A
Sbjct: 265 NWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYLPETVRFFLLSSHYRSQVNFSDSALDEA 324
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR-----DEFHARMSDDLNT 295
+++ +YQ L+ E Q+ G+T ++ A IN +F M+DD N+
Sbjct: 325 HNSLSRLYQALKVVE------QQKGQTLIVDDA---LINNAYASAPGQDFIKAMNDDFNS 375
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
S ++ F L + K ++ IES ++ ++K + + L +L
Sbjct: 376 STAISVLFG------------LARDINKASKVEDIESAWQLAQQLKALAQTLNILQQ-PV 422
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
+ LQ + +A + LT+E + LI ERA A+ NK+F+++D+IR L GI L D
Sbjct: 423 QQFLQAVIGEAAEDG-LTDEAIDSLIIERADAKTNKNFARADEIRIQLKDAGIELEDSRA 481
Query: 416 ETIWR 420
T WR
Sbjct: 482 GTTWR 486
>gi|74317920|ref|YP_315660.1| cysteinyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
gi|109894959|sp|Q3SHN1.1|SYC_THIDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|74057415|gb|AAZ97855.1| Cysteinyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
ATCC 25259]
Length = 454
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/420 (42%), Positives = 236/420 (56%), Gaps = 41/420 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA++ E P +L+ R+ E D L LPP ++PR + ++ Q+ +I Q+++
Sbjct: 73 KIIKRAHENKETPAALTERFIAEMHEDERALGVLPPDHEPRATAYVAQMLALIAQLVDRG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY DV+++V P YGRLSG+ L+ RAGERV VD KR+P DF LWKAAK GEP
Sbjct: 133 LAYAAPNADVYYSVRGFPAYGRLSGKSLDELRAGERVEVDPNKRDPMDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAMSA L FDIHGGG DL FPHHENEIAQS A + V+
Sbjct: 193 AWESPWGQGRPGWHIECSAMSAELLGQHFDIHGGGQDLQFPHHENEIAQSEGAHGCTFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V +NEKMSKSLGNFFTIR++ ++Y +R F++ AHYRSPLNYS LD A
Sbjct: 253 YWLHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAEIVRFFILRAHYRSPLNYSDAHLDDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ A G PAA F M DD NT +
Sbjct: 313 RGALTRLYTALKGAPAA-------GPVDWDAPAAA--------RFRGAMDDDFNTPEAIA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A + + ++LR + ++GLL A S+ LQ
Sbjct: 358 VLFELA-------------AEANRGDTGAAQTLRNLGA-------VIGLLQRDA-SDFLQ 396
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
A L ++ I R AARK +DF++SD+IR +L GI L D T WR
Sbjct: 397 ----AGTSEAGLDASEIEARIAARQAARKARDFAESDRIRDELAAAGIVLEDGPGGTTWR 452
>gi|339483845|ref|YP_004695631.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
gi|338805990|gb|AEJ02232.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
Length = 460
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 234/420 (55%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ +L+ R+ Q D + L PTY+PR +D++E + MI +I D
Sbjct: 73 KIIKRAQENNESIGTLTQRFIQAMNEDSSALGVSSPTYEPRATDYVENMIGMIGTLIEKD 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV P+YG+LSG+ L + RAGERV +DS K++P DF LWK+AK GEP
Sbjct: 133 LAYRASNGDVYYAVHNFPSYGQLSGKSLNDLRAGERVEIDSNKKDPLDFVLWKSAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A V+
Sbjct: 193 FWESPWGRGRPGWHIECSAMSEQLLGVHFDIHGGGQDLQFPHHENEIAQSEGAHDHPFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V +NEKMSKSLGNFFT+R+I + Y P +R F++ A YRSPLNYS L
Sbjct: 253 YWMHNGFVRVDNEKMSKSLGNFFTVREILKHYQPEVVRFFILRAQYRSPLNYSDQHLKDT 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L++ + I+ A D N F M DD NT +
Sbjct: 313 KLALDRLYIALKEVK-------------PIDMPAIDWNNLHAQRFKTAMEDDFNTPEAIA 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A S +N K+ L L ++ +E L+ + L
Sbjct: 360 VLFELA-----SDVNKTGSKENAGLLKGLGNLLGLLQQNPQEYLQ------NKVVTSELN 408
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L A++R LI++R +ARK +S +D IR +L +GI L D + T WR
Sbjct: 409 SLPQDAIER----------LIQQRISARKEGRYSDADAIRKNLLEQGIILEDNPQGTTWR 458
>gi|24373357|ref|NP_717400.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
gi|30316159|sp|Q8EG22.1|SYC_SHEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24347617|gb|AAN54844.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
Length = 459
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 239/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L++R E D L P ++PR + H+ +I DM+ +++
Sbjct: 73 KIIKRANENQEDCNTLTDRLIGEMHKDFDALNMKRPDFEPRATLHIAEIIDMVERLLARG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P YGRLSGQ LE +AG RV VD K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS +NYS L A
Sbjct: 253 YWMHTGMVMIDREKMSKSLGNFFTIRDVLSHYDAETVRYFLLSGHYRSQINYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ ++ AE+ + K F A M DD NT +
Sbjct: 313 RAALERLYTAIKDVDLTVAA-----------APAEEFVAK----FKAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + +L+ + + +K++ +LGL L
Sbjct: 358 VLF-DMVREIN------------RLKLTDMAEASALAVSMKQLADVLGL---------LH 395
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D A + E ++++V + LI ER AR KD+ +D R L G+ L D T
Sbjct: 396 QSPD-AFFKGEGSDDEVAEIEALIVERNRARTEKDWPAADVARNRLNELGVVLEDGPSGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|83591300|ref|YP_431309.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
gi|109894909|sp|Q2RFM3.1|SYC_MOOTA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83574214|gb|ABC20766.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
Length = 476
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/424 (41%), Positives = 235/424 (55%), Gaps = 26/424 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RA + + PL ++ RY +E+ D L T PRVS H++ I I ++
Sbjct: 72 KVINRAREEHQAPLVIAERYIEEFFKDADALNVKRATLYPRVSQHIDAIIAAIATLVERG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV +GDV+F VEK P YGRLS + RAG RV V++ KRNP DFALWKAA GEPS
Sbjct: 132 FAYVADGDVYFEVEKFPAYGRLSKRTPGEMRAGARVEVNTSKRNPLDFALWKAACPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECS M+ YL FDIHGGG DLIFPHHENEIAQ+ A + +
Sbjct: 192 WESPWGPGRPGWHIECSTMALKYLGPGFDIHGGGADLIFPHHENEIAQAEAQTGCTFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG +T N EKMSKS GNFF +R I +R+ PLA+R +L++ HYRSP+++ L +A
Sbjct: 252 WLHNGFITVNQEKMSKSKGNFFLVRDILKRFRPLAVRLYLLATHYRSPIDFDDAGLLAAE 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI----NKLRDEFHARMSDDLNTSH 297
+ + T + A G + PA + +LR EF + M DD NT+
Sbjct: 312 RGLERLENTRRLLGEARCQLTGTGAETTV-PARTSALAGRAEELRQEFISAMDDDFNTAR 370
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L A D + INS LN P + + I E EVL G + +
Sbjct: 371 AL-AALYDLAREINSYLNGTTTIDPAALRTAAI----TFEQLGGEVL--------GLFGQ 417
Query: 358 VLQQLKDKALKRAELTEEDVLQLI-EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
QQ+ D+ L ++ LI + R AR+ +D++ +D IR L GI L D +
Sbjct: 418 ARQQVDDELLS-------GLMDLILQVRQEARQRRDWATADTIRDRLKELGIVLEDTPRG 470
Query: 417 TIWR 420
W+
Sbjct: 471 PRWK 474
>gi|167036780|ref|YP_001664358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039500|ref|YP_001662485.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|256752501|ref|ZP_05493358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300915250|ref|ZP_07132565.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307725174|ref|YP_003904925.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|320115202|ref|YP_004185361.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|229558799|sp|B0KCH9.1|SYC_THEP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558800|sp|B0K5F6.1|SYC_THEPX RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166853740|gb|ABY92149.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|166855614|gb|ABY94022.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748636|gb|EEU61683.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300888974|gb|EFK84121.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307582235|gb|ADN55634.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|319928293|gb|ADV78978.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 466
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 239/422 (56%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + ++ +Y +EY +D +L T P+ ++H+E I + I +I+
Sbjct: 72 KIIKRAQEENVTTKEVAEKYIEEYFIDADNLGIKRATVHPKATEHIEDIIEFIKILIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV G+V+F K +YG+LS + +E +AG R+ ++ K+NP DF LWKA K GEP+
Sbjct: 132 YAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEEKKNPLDFVLWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DL+FPHHENEIAQS AA Y
Sbjct: 192 WDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPHHENEIAQSEAAYGQPFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G++ NNEKMSKS GNFFT+R+ITE+Y+P LR F++ AHYRSP+N+S+ ++ A
Sbjct: 252 WMHIGYLNINNEKMSKSKGNFFTVREITEKYNPEVLRLFMLMAHYRSPINFSLDLMEQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR---MSDDLNTSHI 298
A Y+ L + L K +N + K + M DD NT+
Sbjct: 312 SA----YERLLNAVANLKHLLTVCKDRELNEEEKRIKEKFEEYKKEFEDAMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ + K N++++ K+ L+E + I ++ E ILGL G
Sbjct: 368 ISVLFEMS-KTANTNISGNSSKK-------LVEYILDIFLKLSE---ILGLSYRGV---- 412
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
EL +E++L LIEER ARK K++ +D+IR L KGI L D +
Sbjct: 413 ----------ETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKGIILEDTPEGVR 462
Query: 419 WR 420
W+
Sbjct: 463 WK 464
>gi|436840386|ref|YP_007324764.1| cysteinyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169292|emb|CCO22660.1| cysteinyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 485
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/421 (39%), Positives = 245/421 (58%), Gaps = 13/421 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ G + L+ ++ E+ +DM L L +P+ ++H+ ++ ++ +I
Sbjct: 72 KIINRANESGVSAAELAEKFIGEFYMDMDKLNILRADIEPKCTEHIPEMIELTKTLIEKG 131
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V YG+LSG+ +E+ ++G R+ K +P DFALWKAAK GEP
Sbjct: 132 NAYSTASGDVYFKVRSFEGYGKLSGRNIEDLQSGARIKPGEEKEDPLDFALWKAAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWH+ECSAMS YLS FDIHGGG DL FPHHENEIAQS AA
Sbjct: 192 SWESPWGRGRPGWHLECSAMSEKYLSLPFDIHGGGQDLSFPHHENEIAQSEAATGKEMAR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+W+HNG V N+EKMSKSLGNFFTIR I E++ P LR+FL++ HYRSPL++S L+ A
Sbjct: 252 FWVHNGFVQINSEKMSKSLGNFFTIRDILEKFMPETLRYFLLTMHYRSPLDFSFEALEEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y ++ AL + + AE I++ ++ M DD+NT+
Sbjct: 312 EKGIRRVYTAMEQMNEALQKKKWSKAALPADVLAE--IDEAEKGWNEAMEDDMNTA---- 365
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
GA I + + + K ++ + ++ +I +++K +LG+ P +
Sbjct: 366 GAMGHIFTLIRLAGRIAEDKAWRKSEGGR-DAWVRILDDMKTWGTVLGIFTEEPKVF--- 421
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L+ LK L+R + V +L+ R ARK+KDF++SD+IR +L G+ + D +
Sbjct: 422 LENLKLCMLERKGIEVAKVEELVAARQDARKSKDFARSDEIRDELIELGVDVKDTPQGPA 481
Query: 419 W 419
W
Sbjct: 482 W 482
>gi|217973913|ref|YP_002358664.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
gi|254781693|sp|B8E5F2.1|SYC_SHEB2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|217499048|gb|ACK47241.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
Length = 459
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 235/420 (55%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L+ R E D L L P ++PR + H+ +I DM+ ++
Sbjct: 73 KIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF LWK +K GEP
Sbjct: 133 HAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ ++ AE+ + K F A M DD NT +
Sbjct: 313 RSALERLYTAIKDVDLTVAA-----------APAEEFVAK----FKAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN L + Q ++L K++ +LGLL S+ +
Sbjct: 358 VLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGLL-----SQEPE 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
E+ E + LI ER AR KD++ +D R L G+ L D T WR
Sbjct: 400 AFFQGGGSDDEVAE--IEALIVERNRARTEKDWAAADVARNRLNELGVELEDSPSGTTWR 457
>gi|126173835|ref|YP_001049984.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|386340595|ref|YP_006036961.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
gi|187631633|sp|A3D302.1|SYC_SHEB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125997040|gb|ABN61115.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|334862996|gb|AEH13467.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
Length = 459
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/429 (41%), Positives = 235/429 (54%), Gaps = 54/429 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L+ R E D L L P ++PR + H+ +I DM+ ++
Sbjct: 73 KIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF LWK +K GEP
Sbjct: 133 HAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ ++ AE+ + K F A M DD NT +
Sbjct: 313 RSALERLYTAIKDVDLTVAA-----------APAEEFVAK----FKAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--------- 351
F D ++ IN L + Q ++L K++ +LGLL
Sbjct: 358 VLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGLLSQEPEAFFQG 404
Query: 352 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
G+Y EV + + LI ER AR KD++ +D R L G+ L
Sbjct: 405 GGSYDEVAE----------------IEALIVERNRARTEKDWAAADVARNCLNELGVELE 448
Query: 412 DMGKETIWR 420
D T WR
Sbjct: 449 DGPSGTTWR 457
>gi|392423874|ref|YP_006464868.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
gi|391353837|gb|AFM39536.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
Length = 477
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 242/422 (57%), Gaps = 24/422 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R + G +PL+L+ +Y EY D L LP T P+ ++H+ ++ ++I +I
Sbjct: 74 KIIQRGHVEGMDPLALAQKYIDEYFKDAKALNILPATVHPKATEHIPEMIEIIQGLIETG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+FAV+ PNYG+LSG+ LE+ +AG R+ VD RK +P DFALWK AK GEPS
Sbjct: 134 LAYDVDGDVYFAVDHFPNYGKLSGRTLEDMKAGARIEVDERKHHPMDFALWKKAKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W+SPWG GRPGWHIEC+AMS YL + FDIHGGG DL+FPHHENEIAQ+ +
Sbjct: 194 WESPWGLGRPGWHIECTAMSLKYLGAGFDIHGGGGDLVFPHHENEIAQTEGYLNGQTFAH 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N EKMSKSLGNFFT R++ + +R +L+ HYRSPL+++ L A
Sbjct: 254 YWMHNAFLTINQEKMSKSLGNFFTTRELLAKNSGEVIRFYLLGTHYRSPLDFNDENLGMA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHG--KTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + +++ + AL + G + RI + + R+ F M DD N++
Sbjct: 314 QKGLERLQTSVRLAQQAL---ERTGSVRNERIEEGLKKAAQEAREAFEKAMDDDFNSALA 370
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
F+ + ++N ++ P Q + + +K E+ EVL LL P
Sbjct: 371 YAALFE-----LAKTMNGYVQEHPVSSQ--ALATAQKTLIELGEVLG-FDLLHPAQVQVE 422
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+++ K + E VL++ R+ AR+ KD+ SD IR +GI + D +
Sbjct: 423 NEEMLSKVM-------ELVLKI---RSKARQKKDWEMSDFIRDAFKAEGIVIEDTPQGAS 472
Query: 419 WR 420
W+
Sbjct: 473 WK 474
>gi|228925343|ref|ZP_04088439.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931592|ref|ZP_04094498.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228983345|ref|ZP_04143558.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089221|ref|ZP_04220502.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228694060|gb|EEL47742.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228776335|gb|EEM24688.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228828020|gb|EEM73748.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834265|gb|EEM79806.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 420
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|153005356|ref|YP_001379681.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
gi|171769386|sp|A7HDA1.1|SYC_ANADF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152028929|gb|ABS26697.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 482
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/428 (40%), Positives = 238/428 (55%), Gaps = 30/428 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E+P++L+ RY +E+ DM L L P P+VS+H+ QI MI+ ++
Sbjct: 74 KIIRRATERREDPVALAARYAREFDEDMDALGNLRPDVAPKVSEHVPQIVAMISSLVEKG 133
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F+V P+YGRLS + L++ +G RV KR+P DFALWKAAK GEP
Sbjct: 134 FAYAAANGDVYFSVRAFPDYGRLSKRNLDDLLSGARVEPGEAKRDPLDFALWKAAKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWG GRPGWHIECSAM+ +L D+HGGG DL+FPHH NEIAQS AA D +
Sbjct: 194 TWDSPWGGGRPGWHIECSAMTLAHLGVPIDLHGGGKDLVFPHHTNEIAQSAAAVGDGRTA 253
Query: 181 -----YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVL 235
+WMH+G V ++EKMSKSLGNFFT+R + ++ +R F + HYR+P+NYS
Sbjct: 254 ESFCRHWMHHGFVEIDSEKMSKSLGNFFTLRDVLAKFDAEGVRLFYLGTHYRNPINYSDA 313
Query: 236 QLDSASDAVFYIYQTLQDCEV---ALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDD 292
L A + Y Y+TL+ + SP E G ED L DD
Sbjct: 314 ILAEAERRLNYFYETLEKVDALAEGTSPAGEGGGV------VEDARRAL--------DDD 359
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
N +L +A N+ + KK P+ + L +V+E+ LGL+
Sbjct: 360 FNAPQVLA-VLAEAFTAANALADKRGKKTPEDRA-----RLAAFARDVREIGTTLGLVQR 413
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+ A +R + V I ERA AR+ +DF++SD IR L +G+ALMD
Sbjct: 414 RPAEALRAIRARAAARRG-IDPASVEAKIVERAEARRARDFARSDAIRDALLAQGVALMD 472
Query: 413 MGKETIWR 420
+ T W+
Sbjct: 473 GPQGTTWK 480
>gi|345858483|ref|ZP_08810876.1| cysteinyl-tRNA synthetase [Desulfosporosinus sp. OT]
gi|344328502|gb|EGW39887.1| cysteinyl-tRNA synthetase [Desulfosporosinus sp. OT]
Length = 455
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 246/428 (57%), Gaps = 36/428 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R +PL+L +Y +EY D +L LP T P+ ++H+ ++ ++I ++++N
Sbjct: 51 KIIQRGKVEEMDPLALGQKYIEEYFKDAKELNLLPATIHPKATEHIPEMIEIIQELVSNG 110
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+FAV+ PNYG+LSG+ LE+ +AG RV VD RK +P DFALWK AK EP
Sbjct: 111 LAYETDGDVYFAVDHFPNYGKLSGRTLEDMKAGARVEVDERKHHPMDFALWKKAKPEEPF 170
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W+SPWG GRPGWHIEC+AMS YL S FD+HGGG DL+FPHHENEIAQ+ + +
Sbjct: 171 WESPWGNGRPGWHIECTAMSLKYLGSGFDVHGGGEDLVFPHHENEIAQTEGYLKGQTFAH 230
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N EKMSKSLGNFFTIR++ ++ +R +L+ HYRSPL+++ L A
Sbjct: 231 YWMHNAFLTINQEKMSKSLGNFFTIRELLAKFSGEVIRFYLLGTHYRSPLDFNDQNLVMA 290
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSHI 298
+ ++ +++ + AL G ++ AE + R+ F M DD N++
Sbjct: 291 QKGLERLHTSIRLAQEALD---REGSSSNEQIEAELFKAAKEAREAFEKAMDDDFNSALA 347
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL------LPP 352
F+ + ++N ++ P E+L + + E+ +LG+ L P
Sbjct: 348 YAALFE-----LAKTMNGCVQENPAPS-----EALATAQKTLLELGGVLGIDLLHSVLVP 397
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
A E L+Q+ E VLQ+ R+ +R+ KD+ +D IR L KGI + D
Sbjct: 398 AANDETLKQVM-----------EVVLQI---RSRSRQKKDWEMADFIRDALKDKGIVIED 443
Query: 413 MGKETIWR 420
+ W+
Sbjct: 444 TPQGARWQ 451
>gi|229170941|ref|ZP_04298542.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
gi|228612481|gb|EEK69702.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
Length = 420
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEDLLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAELEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAKEELLDEEIEVLIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|153000119|ref|YP_001365800.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|373948991|ref|ZP_09608952.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
gi|386325170|ref|YP_006021287.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|187631634|sp|A6WLP8.1|SYC_SHEB8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151364737|gb|ABS07737.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|333819315|gb|AEG11981.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|373885591|gb|EHQ14483.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
Length = 459
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 235/420 (55%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L+ R E D L L P ++PR + H+ +I DM+ ++
Sbjct: 73 KIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V P+YGRLSGQ L+ +AG RV VD K+NP DF LWK +K GEP
Sbjct: 133 HAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++D ++ ++ AE+ + K F A M DD NT +
Sbjct: 313 RSALERLYTAIKDVDLTVAA-----------APAEEFVAK----FKAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN L + Q ++L K++ +LGLL S+ +
Sbjct: 358 VLF-DMVREIN-RLKLTDMAQASALAVTL-----------KQLADVLGLL-----SQEPE 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
E+ E + LI ER AR KD++ +D R L G+ L D T WR
Sbjct: 400 AFFQGGGSDDEVAE--IEALIVERNRARTEKDWAAADVARNRLNELGVELEDGPSGTTWR 457
>gi|188590724|ref|YP_001919652.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|251778988|ref|ZP_04821908.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|229558624|sp|B2UY90.1|SYC_CLOBA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|188501005|gb|ACD54141.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|243083303|gb|EES49193.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 470
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 242/428 (56%), Gaps = 41/428 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G + ++Y +EY D LQ T PR ++++E I D + Q+I
Sbjct: 72 KMIKKANEEGTTVKEIGDKYIKEYYEDADKLQIERATVNPRATEYIEDIIDFVAQLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAG----ERVAVDSRKRNPADFALWKAAKA 117
AY VEGDV+F +K +YG+LSGQ +E+ + G D RK++P DFA+WK+ K
Sbjct: 132 YAYEVEGDVYFNTKKFNDYGKLSGQSIEDLQMGASNRTSSVADERKKDPMDFAIWKSQKP 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP+W PWG GRPGWHIECS M+ L DIH GG+DL FPHHENE+AQS A
Sbjct: 192 GEPAWKCPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDLTFPHHENEVAQSEALTGVQ 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
+YWMH+ +V NN+KMSKSL NFFT R I + Y +R F++SAHYR +N+S L
Sbjct: 252 FANYWMHSAYVNINNQKMSKSLNNFFTARDILKEYDSDVVRFFMMSAHYRLQINFSKDLL 311
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKLRDEFHARMSDD 292
DSA +V +Y + + E + + +R N E+ +NK R+++ +M DD
Sbjct: 312 DSAKASVERLYNAIGNLENLID------EVSRENMNEEEVRYLNSLNKYREKYIEKMDDD 365
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT+ LT F+ K N+++N+ K+ + L LI L
Sbjct: 366 FNTADALTVLFE-LTKDTNTNINVNSSKELVNKALDLIREL------------------- 405
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
GA +LQ++ +L E+++ LI++R ARKNKDF+ SD+IR DL +GI L D
Sbjct: 406 GAPLGLLQKITKGSL------EDEIESLIQQRQDARKNKDFALSDKIRDDLKDRGIVLED 459
Query: 413 MGKETIWR 420
+ W+
Sbjct: 460 TPQGVRWK 467
>gi|229027937|ref|ZP_04184090.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
gi|228733325|gb|EEL84154.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
Length = 420
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGNGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTELTDH------NEKWLAELEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
Length = 469
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/439 (41%), Positives = 244/439 (55%), Gaps = 64/439 (14%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE L+ R+ + D A L + P +P+ ++ ++ + MI+ +I
Sbjct: 73 KIIKRANENGETIGQLTQRFIEAMDEDSAKLGIIRPDIEPKATEFIDGMIQMISALIEKG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDVF++V YG+LSG+ LE+ RAGERV VD+ K++P DF LWK+ K EP
Sbjct: 133 FAYVAANGDVFYSVNNFEGYGKLSGKSLEDLRAGERVEVDTHKKDPMDFVLWKSVKPNEP 192
Query: 121 SWDSPWG-----PGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA-- 173
SWDSP+G GRPGWHIECSAMS+H+L FDIHGGG DL FPHHENEIAQS AA
Sbjct: 193 SWDSPFGGPNGGKGRPGWHIECSAMSSHHLGEHFDIHGGGQDLQFPHHENEIAQSEAAHS 252
Query: 174 -----CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 228
CQ V+YWMHNG V ++EKMSKSLGNFFTIR + E+Y +R F++ AHYRS
Sbjct: 253 HNGEPCQ--MVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLEKYDAEVVRFFILRAHYRS 310
Query: 229 PLNYSVLQLDSASDAVFYIYQTLQD---CEVALSPFQEHGKTARINPAAEDCINKLRDEF 285
PLNYS LD A A+ +Y +L+ +VA+ Q H +AR A
Sbjct: 311 PLNYSDQHLDDAKLALTRLYTSLRGHVVADVAIDWQQPH--SARFKEA------------ 356
Query: 286 HARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR 345
M DD NT + F L + K + L + L+ +
Sbjct: 357 ---MDDDFNTPEAMAVLFD------------LANEVNKTKSLEVAALLKSLAG------- 394
Query: 346 ILGLLPPGA----YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRA 401
+LGLL A +V QL LK D+ QL+ +R A+K K+F+++D+IR
Sbjct: 395 VLGLLQRDADAFLQGDVAAQLAGTELKI------DIDQLVIQRNEAKKTKNFAEADRIRK 448
Query: 402 DLTRKGIALMDMGKETIWR 420
+L GI L D T WR
Sbjct: 449 ELADAGIVLEDTALGTTWR 467
>gi|30260280|ref|NP_842657.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47525344|ref|YP_016693.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183123|ref|YP_026375.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49481691|ref|YP_034442.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145127|ref|YP_081701.1| cysteinyl-tRNA synthetase [Bacillus cereus E33L]
gi|65317550|ref|ZP_00390509.1| COG0215: Cysteinyl-tRNA synthetase [Bacillus anthracis str. A2012]
gi|165873141|ref|ZP_02217757.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167635089|ref|ZP_02393406.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|167641949|ref|ZP_02400184.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170689572|ref|ZP_02880758.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|170707565|ref|ZP_02898018.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|177655593|ref|ZP_02936974.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|196041797|ref|ZP_03109087.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|218901292|ref|YP_002449126.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
gi|227812763|ref|YP_002812772.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
gi|229601947|ref|YP_002864741.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0248]
gi|254684407|ref|ZP_05148267.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254733756|ref|ZP_05191471.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Western North
America USA6153]
gi|254756312|ref|ZP_05208341.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Vollum]
gi|254758390|ref|ZP_05210417.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
gi|300119599|ref|ZP_07057143.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
gi|386733956|ref|YP_006207137.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. H9401]
gi|421510415|ref|ZP_15957308.1| cysteinyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|421640503|ref|ZP_16081085.1| cysteinyl-tRNA ligase [Bacillus anthracis str. BF1]
gi|423553976|ref|ZP_17530303.1| cysteinyl-tRNA synthetase [Bacillus cereus ISP3191]
gi|33301677|sp|Q81VV1.1|SYC_BACAN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216160|sp|Q63HB0.1|SYC_BACCZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216199|sp|Q6HPS8.1|SYC_BACHK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735045|sp|B7JK97.1|SYC_BACC0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765175|sp|C3P9N5.1|SYC_BACAA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765176|sp|C3LJ62.1|SYC_BACAC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30253601|gb|AAP24143.1| cysteine--tRNA ligase [Bacillus anthracis str. Ames]
gi|47500492|gb|AAT29168.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177050|gb|AAT52426.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49333247|gb|AAT63893.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978596|gb|AAU20146.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus cereus
E33L]
gi|164711121|gb|EDR16682.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167510080|gb|EDR85491.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|167529563|gb|EDR92313.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170127561|gb|EDS96435.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|170666485|gb|EDT17262.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|172080057|gb|EDT65155.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|196027417|gb|EDX66034.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|218537598|gb|ACK89996.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
gi|227004950|gb|ACP14693.1| cysteine--tRNA ligase [Bacillus anthracis str. CDC 684]
gi|229266355|gb|ACQ47992.1| cysteine--tRNA ligase [Bacillus anthracis str. A0248]
gi|298723071|gb|EFI63969.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
gi|384383808|gb|AFH81469.1| Cysteinyl-tRNA synthetase [Bacillus anthracis str. H9401]
gi|401182183|gb|EJQ89322.1| cysteinyl-tRNA synthetase [Bacillus cereus ISP3191]
gi|401819497|gb|EJT18674.1| cysteinyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|403392319|gb|EJY89573.1| cysteinyl-tRNA ligase [Bacillus anthracis str. BF1]
Length = 465
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|229083409|ref|ZP_04215757.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
gi|228699842|gb|EEL52479.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
Length = 440
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 237/422 (56%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++
Sbjct: 49 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV++ ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 109 YAYESEGDVYYKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 169 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTGKTFARY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 229 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 288
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + I K + F M+DD NT++
Sbjct: 289 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLVE------IEKFQLAFEEAMNDDFNTANA 342
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A Q L S IE VK+ + G+L
Sbjct: 343 ITELYNLA-------------NHANQYLLEEHTSKVVIEAYVKQFETLFGILGL------ 383
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 384 -------ELTKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 436
Query: 419 WR 420
W+
Sbjct: 437 WK 438
>gi|168187713|ref|ZP_02622348.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
gi|169294420|gb|EDS76553.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
Length = 466
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 245/425 (57%), Gaps = 39/425 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ L +R+ QEY D L T PR +++M++I + + +I+
Sbjct: 72 KMIKKANEENITVKELGDRFIQEYYKDADGLNIKRATVNPRATEYMDEIIEFVRDLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F ++ YG+LSGQ L++ +AG R+++D RK++P DFA+WK+ K GEPS
Sbjct: 132 YAYEVNGDVYFNTKQFKEYGKLSGQNLDDLQAGARISIDERKKDPMDFAIWKSEKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WD PWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS A + Y
Sbjct: 192 WDCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQSEARNGKAFAHY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+ ++ +N+KMSKSL NFFT R+I E+Y +R F++SAHYR+PLN+S L SA
Sbjct: 252 WMHSAYLNIDNKKMSKSLNNFFTTREILEKYDAEVVRLFMLSAHYRTPLNFSNELLQSAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED------CINKLRDEFHARMSDDLNT 295
+ +Y + + E L +I+ ED +N ++++ +M DD NT
Sbjct: 312 ASNERLYNAIGNLERLLDE-------VKIDKITEDEKEYVKNLNSYKEKYIEKMDDDFNT 364
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ + F D +K IN+++N K+ + L LI +E+ + LG+L
Sbjct: 365 ADAIAVIF-DLVKDINTNINTESSKELVEYSLELI----------RELGKPLGILQKSTI 413
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
++ +++ +LIE+R ARK++D++ +D+IR DL +GI L D +
Sbjct: 414 LDLNTEIE---------------KLIEQRQQARKDRDWALADKIRDDLKARGIVLEDTPQ 458
Query: 416 ETIWR 420
W+
Sbjct: 459 GVRWK 463
>gi|196047745|ref|ZP_03114944.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225862142|ref|YP_002747520.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB102]
gi|376264117|ref|YP_005116829.1| cysteinyl-tRNA synthetase [Bacillus cereus F837/76]
gi|254765177|sp|C1ET19.1|SYC_BACC3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|196021423|gb|EDX60131.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225788057|gb|ACO28274.1| cysteine--tRNA ligase [Bacillus cereus 03BB102]
gi|364509917|gb|AEW53316.1| Cysteinyl-tRNA synthetase [Bacillus cereus F837/76]
Length = 465
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|342218372|ref|ZP_08710986.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
gi|341589784|gb|EGS33046.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
Length = 481
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/425 (41%), Positives = 248/425 (58%), Gaps = 25/425 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II AN G + +++NRY Y M L PRVS+HM+ I MI +IN +
Sbjct: 75 KIINAANGEGVSWDTIANRYIASYFEVMDALHVHRADIYPRVSEHMDAIFTMIQTLINKN 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV++ DV+++VEK YG+LSG+ L++ AG R+ V+ +K++P DFALWK AK GEP+
Sbjct: 135 IAYVLDNDVYYSVEKFDGYGKLSGRCLDDMMAGARIEVNDKKKHPMDFALWKGAKPGEPA 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAAC--QDSNV 179
WDSPWG GRPGWHIECSAMS YL + FD HGGG DLIFPHHENEIAQS AC + V
Sbjct: 195 WDSPWGKGRPGWHIECSAMSHQYLGNSFDFHGGGSDLIFPHHENEIAQS-EACFGHEPMV 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ + Y P A+R FLIS HYRSPL++S +L
Sbjct: 254 RYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYKPDAVRFFLISNHYRSPLDFSDARLKE 313
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
+ ++ + ++ + +AL K+A + +D ++ ++F M DD NT+
Sbjct: 314 MTRSLDRVRTSIVNV-LALLNMPTGSKSAEADNLLQDA-KQIMEDFETAMCDDFNTALAS 371
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR----ILGLLPPGAY 355
G F+ A K +N+ Q QQ ++S + EVK + R ILG+L A+
Sbjct: 372 AGIFELAKK-----VNIY--HQAVAQQKVAVDS--SVVTEVKRIFRTMTDILGILED-AW 421
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
E Q K + A L E +++ R R NK + +D IR LT GI + D +
Sbjct: 422 QE--QSDDVKQTEYAALVE----TILDIRNECRANKQYELADSIRNKLTELGIIIEDSPQ 475
Query: 416 ETIWR 420
W+
Sbjct: 476 GVRWK 480
>gi|228912829|ref|ZP_04076476.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228943896|ref|ZP_04106281.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228815729|gb|EEM61965.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228846765|gb|EEM91770.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 440
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 49 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 109 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 169 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 229 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 288
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 289 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 342
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 343 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 383
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 384 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 436
Query: 419 WR 420
W+
Sbjct: 437 WK 438
>gi|120602598|ref|YP_966998.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|187629811|sp|A1VDQ5.1|SYC_DESVV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120562827|gb|ABM28571.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 485
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 236/423 (55%), Gaps = 17/423 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G ++ +Y + DM L L +P+ + H+ ++ + ++I
Sbjct: 72 KIIKRANEEGLTSQQVAEKYIDTFYEDMDRLNVLRADIEPKATGHILEMIALCEKLIAKG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DFALWK+AK GEP
Sbjct: 132 KAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGEEKEDPLDFALWKSAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS ++ DIHGGG DLIFPHHENEIAQ+ AA V
Sbjct: 192 SWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFPHHENEIAQTEAALDKPFVR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V + EKMSKSLGNF TIR I E Y P LR FL++ HYRSP++++ +D A
Sbjct: 252 YWMHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSPIDFTFDSMDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDC---INKLRDEFHARMSDDLNTS 296
++ IY+ L E G++ P D + L F + DDLNT+
Sbjct: 312 EKSLKRIYEALSLART------ERGRSKWSATPLPADVTAEFDTLDRAFDEALEDDLNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
L F ++ +N L K + + L+L+E L + + +VL + G P
Sbjct: 366 AALGHVFG-TIRLVNRLLED-KNLRKSAETLALLERLDGLVAKWMKVLGVFGREPEA--- 420
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
L LK+ ++R + V L+EER + R KDF+++D IR +L GI + D
Sbjct: 421 -FLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRDELAALGIEVRDTPSG 479
Query: 417 TIW 419
+W
Sbjct: 480 AVW 482
>gi|52841538|ref|YP_095337.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777173|ref|YP_005185610.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|61216153|sp|Q5ZVY1.1|SYC_LEGPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52628649|gb|AAU27390.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364507987|gb|AEW51511.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 456
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/427 (41%), Positives = 241/427 (56%), Gaps = 55/427 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ G + L+ +Y D L LPP ++PR + H+E I +I +++
Sbjct: 73 KIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF LWK AK GEP
Sbjct: 133 NAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQS AA +
Sbjct: 193 SWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKPFAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSPLNYS L +A
Sbjct: 253 YWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSPLNYSEENLLNA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD----EFHARMSDDLNTS 296
A+ +YQ ++D + P ED +KL + +F+ M+DD NT
Sbjct: 313 KKALIRLYQAVKD----------------VPPQTED--SKLDEYWQVQFNQAMNDDFNTP 354
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
L+ FQ L + K +L +L+ + ILG L
Sbjct: 355 VALSVLFQ------------LAHEVNKSNSPALAHTLKNLAG-------ILGFL------ 389
Query: 357 EVLQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
Q ++ ++ L EE+ L QLI ER AR ++++K+DQIRADL KGI L D
Sbjct: 390 ----QKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRADLLSKGIELEDG 445
Query: 414 GKETIWR 420
T WR
Sbjct: 446 ATGTTWR 452
>gi|397666931|ref|YP_006508468.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395130342|emb|CCD08580.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 240/425 (56%), Gaps = 51/425 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ G + L+ +Y D L LPP ++PR + H+E I +I +++
Sbjct: 73 KIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF LWK AK GEP
Sbjct: 133 NAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQS AA +
Sbjct: 193 SWHSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKPFAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSPLNYS L +A
Sbjct: 253 YWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSPLNYSEENLLNA 312
Query: 241 SDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ +YQ ++D + A S E+ +++F+ M+DD NT
Sbjct: 313 KKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQAMNDDFNTPVA 356
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L+ FQ L + K +L +L+ + ILG L
Sbjct: 357 LSILFQ------------LAHEVNKSNSPALAHTLKNLAG-------ILGFL-------- 389
Query: 359 LQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
Q ++ ++ L EE+ L QLI ER AR ++++K+DQIRADL KGI L D
Sbjct: 390 --QKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRADLLSKGIELEDGAT 447
Query: 416 ETIWR 420
T WR
Sbjct: 448 GTTWR 452
>gi|229194480|ref|ZP_04321283.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
gi|228588946|gb|EEK46961.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
Length = 420
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLRSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDHDEKWLAD------LKKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|226940330|ref|YP_002795404.1| Syc [Laribacter hongkongensis HLHK9]
gi|254781683|sp|C1D7F5.1|SYC_LARHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226715257|gb|ACO74395.1| Syc [Laribacter hongkongensis HLHK9]
Length = 457
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/424 (42%), Positives = 238/424 (56%), Gaps = 46/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE L+ R+ D A L P ++PR + + + MI ++I
Sbjct: 73 KIIRRAAENGEPINVLTQRFIDAMDEDAAALGVQKPNFEPRATQFVPDMISMIEELIGKG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAK GEP
Sbjct: 133 RAYAAPNGDVYYAVREFAGYGQLSGKSLDDLRAGERVDVDPNKRDPMDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAM+ HY FDIHGGG DL FPHHENEIAQS A V+
Sbjct: 193 AWPSPWGQGRPGWHIECSAMNEHYFGPHFDIHGGGADLQFPHHENEIAQSEGAHDCKFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG + +NEKMSKSLGNFFTIR++ E+Y +R F++ AHYRSPLNYS L+ A
Sbjct: 253 YWMHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSPLNYSDAHLEDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI----NKLRDEFHARMSDDLNTS 296
A+ +Y L++ PAA+ + N F A M DD NT
Sbjct: 313 RSALSRLYTALKNV-----------------PAADVALDWEANDYARRFRAAMDDDFNTV 355
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ F+ L + K + L L+ + +LGLL
Sbjct: 356 EAVAVLFE------------LAGEANKSRSAELAGWLKTLGG-------VLGLLQ----R 392
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ + L+ +L+ E++ ++V QLI R AAR KD+++SD+IR +L +GI L D
Sbjct: 393 DPVDFLQGGSLE-GEISADEVEQLIAARKAARAGKDWAESDRIRDELIARGIVLEDGAGG 451
Query: 417 TIWR 420
T WR
Sbjct: 452 TTWR 455
>gi|229159263|ref|ZP_04287287.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
gi|228624155|gb|EEK80957.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
Length = 440
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 49 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 109 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 169 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 229 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 288
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 289 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQAAFEEAMDDDFNTANA 342
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 343 ITELYNVA----NHANQYLLEEHTSK---IVIEAYVK---QLETLFDILGL--------- 383
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 384 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 436
Query: 419 WR 420
W+
Sbjct: 437 WK 438
>gi|229153868|ref|ZP_04281998.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|228629549|gb|EEK86246.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
Length = 420
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + H + + + K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTNHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|334143779|ref|YP_004536935.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
gi|333964690|gb|AEG31456.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
Length = 458
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 238/422 (56%), Gaps = 42/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ SL+ R+ D L L P +P+ +D + +I+ ++ +I
Sbjct: 74 KIIKRALENQESVQSLTERFITAMHEDETALNILRPDIEPKATDFIPEIQQLVNTLIEKG 133
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V+ +YGRLSG++ + AG RV V+ K++P DF LWKA+KA EP
Sbjct: 134 HAYAATNGDVYFKVKSFESYGRLSGKKQDELEAGARVEVNPNKQDPMDFVLWKASKANEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDS WG GRPGWHIECSAMS + + DIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 194 AWDSAWGQGRPGWHIECSAMSGSCIGERLDIHGGGMDLQFPHHENEIAQSECAHGEHYVN 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V +NEKMSKSL NFFTIR++ + YHP +R+FL+S+HYRSPLNY++ LD A
Sbjct: 254 TWMHVGFVRVDNEKMSKSLNNFFTIREVLKDYHPEVIRYFLLSSHYRSPLNYTIENLDIA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y L+ A I P + +F+ M DD NT +
Sbjct: 314 KTNLARLYTALE--------------AATIQPGLVAVGTEFEAKFNDAMDDDFNTPQAMA 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ L K+ K QQ L+ L+ + N LGLL P +
Sbjct: 360 VLFE------------LVKEVNKTQQPELVGLLQSLANR-------LGLLTETPEFF--- 397
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K + + L++E + LI ER AR +K++++SD+IR DL KG+ L+D + T
Sbjct: 398 ---FKSQVGQPDGLSDEAIEALIVERTQARADKNWARSDEIRDDLLAKGVELLDSKEGTS 454
Query: 419 WR 420
WR
Sbjct: 455 WR 456
>gi|374992959|ref|YP_004968458.1| cysteinyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
gi|357211325|gb|AET65943.1| cysteinyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
Length = 452
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 243/422 (57%), Gaps = 24/422 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R N G +PL+L +Y +EY D L +P T P+ ++H+ ++ ++I +I+
Sbjct: 49 KIIQRGNVEGMDPLALGQKYIEEYFKDAKALNLMPATVHPKATEHIPEMIEIIQGLIDTG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+FAVE+ P+YG+LSG+ +E+ +AG RV VD RK++P DFALWK AK GEP
Sbjct: 109 LAYEVDGDVYFAVERFPDYGKLSGRTIEDMKAGARVEVDERKKHPMDFALWKKAKPGEPF 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W SPWG GRPGWHIECSAMS YL + FDIHGGG DL FPHHENEIAQ+ + +
Sbjct: 169 WQSPWGEGRPGWHIECSAMSLKYLGAGFDIHGGGEDLSFPHHENEIAQTEGYLKGETFAR 228
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N EKMSKSLGNFFTIR++ E +R +L+ HYRSPL+++ L A
Sbjct: 229 YWMHNAFLTINQEKMSKSLGNFFTIRELLENNPGEVIRFYLLGTHYRSPLDFNDQNLSMA 288
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ + +++ + AL+ K I+ + + R F M DD N++
Sbjct: 289 QKGLERLQTSVRLAQEALNRSGTQ-KNDPIHGGLVEAAQEARKAFEKAMDDDFNSALAYA 347
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG--LLPPGAYSEV 358
F+ A K +N + K+ Q E L + + E+ +LG LL P S
Sbjct: 348 ALFELA-KTMNGHV-----KENSQSS----EGLAVAQKTLIELGGVLGFDLLHPAQVS-- 395
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ EL + + +++ R+ +R+ KD+ +D IR L KGI + D +
Sbjct: 396 --------VENEELLSQVMNVVLQIRSKSRQKKDWEMADFIRDSLKEKGIVIEDTPQGAR 447
Query: 419 WR 420
W+
Sbjct: 448 WQ 449
>gi|110799706|ref|YP_697116.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|168211251|ref|ZP_02636876.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
gi|122958668|sp|Q0TMM4.1|SYC_CLOP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110674353|gb|ABG83340.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|170710753|gb|EDT22935.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
Length = 466
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 237/419 (56%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G + + Y +EY D L T PR ++ + +I + +++
Sbjct: 73 KMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEIIKFVKGLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA+WKA K GEP+
Sbjct: 133 YAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDERKKDPMDFAIWKAQKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS A + Y
Sbjct: 193 WNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQSEALTGEPFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR LN+S L+SA
Sbjct: 253 WLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQLNFSEDLLESAK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+V IY + + E + A + +NK ++++ +M DD NT+ +T
Sbjct: 313 ASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNKYKEKYIEKMDDDFNTADAITA 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K N+++ + K+ Q+ L LI L GA + Q+
Sbjct: 372 IF-DLIKDTNTNITIDSSKELAQKALELIREL-------------------GAPLGMFQK 411
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L EE++ LI +R ARK++DF+ +D+IR +L +GI L D + W+
Sbjct: 412 STKGNL------EEEIEALIAKRQQARKDRDFTLADKIRDELKDRGIVLEDTPQGVRWK 464
>gi|375083186|ref|ZP_09730216.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
gi|374742140|gb|EHR78548.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
Length = 474
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 236/423 (55%), Gaps = 28/423 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ GE+P L+ ++ + +L DM L+ P PRV++H++ I D + ++
Sbjct: 72 KIIRRANETGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQDIIDFVKKLEEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+F V K YG+LS E+ R G RV K+NP DFALWK AK GEP
Sbjct: 132 YAYEGSDGVYFEVRKYQEYGKLSKINPEDLRKGVRVEPGEGKKNPEDFALWKKAKPGEPK 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS YL FDIHGGG DLIFPHHENEIAQ+ A V Y
Sbjct: 192 WESPWGKGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQTEACTGKEWVRY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V EKMSKSLGNF TIR++ +RY +R F++ HYRSPL+Y+ + A
Sbjct: 252 WLHTGFVMVKGEKMSKSLGNFVTIRELLQRYSAEVIRFFVLQKHYRSPLDYTEEGIQHAK 311
Query: 242 DAVFYIYQTLQDCEVAL----SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
+ + +Y TL++ +AL +PF+ + + D R +F+ M DD NT+
Sbjct: 312 NNLERLYNTLENIRIALEKAETPFKWDKEEFELYEVVRDA----RKKFYEAMDDDFNTAE 367
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A +N L ++K PK+ LRK K V + G+ + +
Sbjct: 368 AMKPIFEVA-NAVNRYLEKVEK--PKES------VLRKALEFFKMVSEVFGI-----FED 413
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
++ K+ + +V R+A RK K+F +D+IR++L GI L D + T
Sbjct: 414 YFKEAKETKEEELIELLIEV------RSALRKQKNFELADKIRSELRELGIQLEDTPQGT 467
Query: 418 IWR 420
IW+
Sbjct: 468 IWK 470
>gi|229182484|ref|ZP_04309735.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
gi|228600939|gb|EEK58508.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
Length = 420
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+ +M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTGNMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|228905887|ref|ZP_04069784.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
gi|228853702|gb|EEM98462.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
Length = 420
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWK AK GE
Sbjct: 89 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAELEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|229094812|ref|ZP_04225817.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
gi|228688555|gb|EEL42428.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
Length = 420
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAFEEAMDDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|423578058|ref|ZP_17554177.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-D12]
gi|401203638|gb|EJR10474.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-D12]
Length = 465
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLRSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHDEKWLAD------LKKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKNRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|410464212|ref|ZP_11317669.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409982672|gb|EKO39104.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 485
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/419 (41%), Positives = 236/419 (56%), Gaps = 9/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN G ++ RY + DM L L P +P+ ++++ ++ + ++I++
Sbjct: 72 KIIKKANAEGTTSQEIAERYIATFYEDMDKLGILRPNAEPKATEYIGEMASLAQRLIDSG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DFALWKA+K GEP
Sbjct: 132 HAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDFALWKASKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SP+GPGRPGWH+ECSAMS L DIHGGG DLIFPHHENEIAQS AA
Sbjct: 192 VWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFPHHENEIAQSEAAIGGEFCR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N EKMSKSLGNF TIR I RY P LR FL+S+ YRSPL+YS LD A
Sbjct: 252 YWVHNGFVRINTEKMSKSLGNFITIRDIYARYLPEVLRFFLLSSQYRSPLDYSDQGLDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ IY E AL+ + ++ + +++ + F A M DDLNT+ +
Sbjct: 312 EKGIKRIYTAKVQMEQALA--RAKWSETKLPADVTEELSRHEEGFTAAMDDDLNTAQAMG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F L + L M K K ++ + E LR+I ++G+ A + L
Sbjct: 370 HVF--GLVRLAGRL-MEDKTLVKSRETA--EVLRRILANFAVWAEVIGVFGTDA-AAFLA 423
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+LK L R + V L+ ER ARK KDF++SD IR +L G+ +MD W
Sbjct: 424 ELKACRLTRLGIDATRVDALVAERQDARKAKDFARSDAIRDELAVLGVTVMDTPTGPQW 482
>gi|423405186|ref|ZP_17382359.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|423462636|ref|ZP_17439430.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|423480029|ref|ZP_17456743.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
gi|401130815|gb|EJQ38471.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|401645556|gb|EJS63211.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|402424013|gb|EJV56209.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
Length = 465
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEDLLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + AE + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEVLIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|18311409|ref|NP_563343.1| cysteinyl-tRNA synthetase [Clostridium perfringens str. 13]
gi|168214716|ref|ZP_02640341.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|168217920|ref|ZP_02643545.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|182626995|ref|ZP_02954725.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|21264002|sp|Q8XHQ5.1|SYC_CLOPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|18146093|dbj|BAB82133.1| cysteine-tRNA ligase [Clostridium perfringens str. 13]
gi|170713805|gb|EDT25987.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|177907665|gb|EDT70289.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|182380037|gb|EDT77516.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
Length = 466
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 237/419 (56%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G + + Y +EY D L T PR ++ + +I + +++
Sbjct: 73 KMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEIIKFVKGLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA+WKA K GEP+
Sbjct: 133 YAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDERKKDPMDFAIWKAQKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS A + Y
Sbjct: 193 WNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQSEALTGEPFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR LN+S L+SA
Sbjct: 253 WLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQLNFSEDLLESAK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+V IY + + E + A + +NK ++++ +M DD NT+ +T
Sbjct: 313 ASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNKYKEKYIEKMDDDFNTADAITA 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K N+++ + K+ Q+ L LI L GA + Q+
Sbjct: 372 IF-DLIKDTNTNITIDSSKELAQKALELIREL-------------------GAPLGMFQK 411
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L EE++ LI +R ARK++DF+ +D+IR +L +GI L D + W+
Sbjct: 412 STKGNL------EEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVLEDTPQGVRWK 464
>gi|118475860|ref|YP_893011.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|187629790|sp|A0R8G1.1|SYC_BACAH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118415085|gb|ABK83504.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
Length = 465
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIHELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|289422515|ref|ZP_06424358.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429727475|ref|ZP_19262243.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
gi|289157087|gb|EFD05709.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429152244|gb|EKX95075.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
Length = 467
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 240/421 (57%), Gaps = 29/421 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+++ G +P ++ +Y +EY +D L T P+V+D++++I I +++
Sbjct: 72 KIIKRSHEEGISPEEVAEKYIKEYFIDCDGLGIKRATVHPQVTDNIKEIISFIQDLVDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV F + YG+LS Q +E G R+ VD +K +P DF LWKA K GEP
Sbjct: 132 YAYESNGDVLFRTREFKEYGKLSHQNIEELELGARIDVDDKKEDPLDFVLWKAKKDGEPG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNV-- 179
W SPWG GRPGWHIECS MS+ YL + DIH GG DL FPHHENEIAQS C++ +V
Sbjct: 192 WKSPWGEGRPGWHIECSVMSSRYLGNTIDIHAGGQDLQFPHHENEIAQS--ECRNGHVFA 249
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
+YWMHNG++ + EKMSKSLGNFFT+R+I E+Y +R FL+S HYR+P+N+S LD
Sbjct: 250 NYWMHNGYINVDGEKMSKSLGNFFTVREIAEKYDLGLVRFFLLSTHYRNPVNFSDTILDQ 309
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A + + + E +S E K + D +N + +F M DDLNTS +
Sbjct: 310 AKAGLERLTNARDNAEFMMSKL-EDTKMSPEETGLVDELNSYKTKFIEAMDDDLNTSDAI 368
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F+ A KF+N+++ K+ + L NE+ VL I
Sbjct: 369 SAIFELA-KFMNTNIKDTSSKEFIGLNIDLF-------NELTGVLNI------------- 407
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+K+++ + V ++I +RA A+KNKDF+ +D+IR +L GI + D + W
Sbjct: 408 ---ANKSVEENDDLARTVEEMIAKRAEAKKNKDFALADKIREELLEMGIVIEDTRQGVKW 464
Query: 420 R 420
+
Sbjct: 465 K 465
>gi|160881448|ref|YP_001560416.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
gi|187629805|sp|A9KSM5.1|SYC_CLOPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160430114|gb|ABX43677.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
Length = 470
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 234/423 (55%), Gaps = 30/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G + +S RY +EYL D L LP T +P+ ++ ++ + DMI ++I
Sbjct: 72 KIIKKANEEGVSAHEISERYIKEYLKDTEALNVLPVTTRPKATEEIDGMIDMIEELIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY G V+F YG+LS + +++ AG R+AV K +P DF LWK K GEP+
Sbjct: 132 HAYEKNGTVYFKTRSFKQYGKLSKKNIDDLEAGARIAVADEKDDPMDFVLWKPKKVGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W +PW GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQ+ Y
Sbjct: 192 WSAPWCDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLIFPHHENEIAQTECCTGKEFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + +N+KMSKS GNFFT+R+I Y P LR FL+S +YRSP+N+S ++S+
Sbjct: 252 WMHNGFLNVDNKKMSKSEGNFFTVREIFAEYAPAVLRFFLLSVNYRSPINFSRDIIESSK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK----LRDEFHARMSDDLNTSH 297
+ + I ++ E G+ + +E + K L +F M DD NT+
Sbjct: 312 NGLERIQTAVEQLHFLAKVKAEKGELSTELTESESTLLKEFDALIKKFEDAMDDDFNTAD 371
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
++ F+ M+K S +E ++K+ + + ILGL
Sbjct: 372 AISSIFE-----------MVKLSNTYVTVESSVEMIQKVLSNITTFCDILGL-------- 412
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ K+AE+ +E++ QLI +R +ARK KDF+KSD+IR L KGI L D +
Sbjct: 413 -------ETEKKAEILDEEIEQLIADRQSARKAKDFAKSDEIRNLLLEKGIILEDTREGV 465
Query: 418 IWR 420
W+
Sbjct: 466 KWK 468
>gi|47569824|ref|ZP_00240494.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
gi|47553517|gb|EAL11898.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
Length = 465
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + +L +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEDLLDEEIEALIQKRIEARKNRDFALSDQIRDDLKNRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|251799666|ref|YP_003014397.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
gi|247547292|gb|ACT04311.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
Length = 470
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/420 (38%), Positives = 237/420 (56%), Gaps = 26/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++A LG +++++ + D+A L T PRV++H+ I I +++
Sbjct: 74 KLIKKAEQLGLTVPEVADKFINAFNEDIASLGVHKATLNPRVTEHIPSIIAFIQGLVDTG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV++ K YG+LS Q LE + G R+ V RK NP DF LWK K GE +
Sbjct: 134 YAYASEGDVYYRTSKFEEYGKLSHQNLEELQFGIRIEVGERKENPQDFVLWKGVKPGEIN 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAM+ YL DIHGGG DL FPHHE E+AQS A +Y
Sbjct: 194 WESPWGPGRPGWHIECSAMAREYLGDTLDIHGGGHDLQFPHHECEVAQSEALTGKQLANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGN T+ ++ +R P A+R+F++S HYRSPLN++ + A
Sbjct: 254 WMHNGYIHINNEKMSKSLGNGITVNELVKRVKPAAIRYFILSTHYRSPLNFTDETIAQAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++V I + + LS F + A D I +L+ +F A+M DD NT +T
Sbjct: 314 NSVDRIANCAANLKHRLSTFDGQSEGAAAGELG-DRIAQLKAQFEAKMGDDFNTPDAITA 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQL-SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + + + + + + +L+ +L ++ +LGLLP
Sbjct: 373 VFE----LVTEANQYMNRADASSEGIAALLAALEQMNT-------VLGLLP--------- 412
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+A AEL ++++ LI ER AR K+++++D+IR LT KGIAL D + WR
Sbjct: 413 ----EAGTDAELLDDEIDALIVERTEARAAKNWARADEIRNLLTEKGIALEDTPQGIRWR 468
>gi|422347491|ref|ZP_16428403.1| cysteinyl-tRNA synthetase [Clostridium perfringens WAL-14572]
gi|373223945|gb|EHP46286.1| cysteinyl-tRNA synthetase [Clostridium perfringens WAL-14572]
Length = 466
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 237/419 (56%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G + + Y +EY D L T PR ++ + +I + +++
Sbjct: 73 KMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEIIKFVKGLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA+WKA K GEP+
Sbjct: 133 YAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFAIWKAQKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS A + Y
Sbjct: 193 WNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQSEALTGEPFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR LN+S L+SA
Sbjct: 253 WLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQLNFSEDLLESAK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+V IY + + E + A + +NK ++++ +M DD NT+ +T
Sbjct: 313 ASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNKYKEKYIEKMDDDFNTADAITA 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K N+++ + K+ Q+ L LI L GA + Q+
Sbjct: 372 IF-DLIKDTNTNITIDSSKELAQKALELIREL-------------------GAPLGMFQK 411
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L EE++ LI +R ARK++DF+ +D+IR +L +GI L D + W+
Sbjct: 412 STKGNL------EEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVLEDTPQGVRWK 464
>gi|118442910|ref|YP_877177.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
gi|187629804|sp|A0PXS5.1|SYC_CLONN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118133366|gb|ABK60410.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
Length = 466
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 246/422 (58%), Gaps = 33/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ L +R+ EY D L T PR +++M++I + +I+
Sbjct: 72 KMIKKANEENITVKELGDRFIHEYYKDADGLNIKRATANPRATEYMDEIIQFVKDLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV+F+ ++ YG+LSGQ L++ +AG R++VD RK++P DFA+WK+ K GEPS
Sbjct: 132 YAYEVNGDVYFSTKQFKEYGKLSGQNLDDLQAGARISVDERKKDPMDFAIWKSEKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+ PWG GRPGWHIECS M+ L DIH GG DL+FPHHENEIAQS A + +Y
Sbjct: 192 WNCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPHHENEIAQSEARNGKTFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+ ++ NN+KMSKSL NFFT R+I E+Y +R F++SAHYR+PLN+S L SA
Sbjct: 252 WMHSAYLNINNKKMSKSLNNFFTTREILEKYDAEVIRLFMLSAHYRTPLNFSDDLLQSAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
+ +Y + + E L K ++ ++ + L ++++ +M DD NT+
Sbjct: 312 ASNERLYNAIGNLERLLDEV----KVDKVTENEKEYVKNLESYKEKYIEKMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F D +K IN+++N K+ + L LI +E+ + LG+L ++
Sbjct: 368 ISVIF-DLVKDINTNINTESSKELVEYSLELI----------RELGKPLGILQKSTMLDL 416
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+++ +LIE+R ARK+KD++ +D+IR DL +GI L D +
Sbjct: 417 NAEIE---------------KLIEQRQQARKDKDWALADKIRDDLKARGIVLEDTPQGVR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|254724230|ref|ZP_05186015.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A1055]
Length = 465
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKS+GNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSIGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|423456289|ref|ZP_17433142.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X1-1]
gi|401130888|gb|EJQ38543.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X1-1]
Length = 465
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRHPINFSEDLLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQVAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFSILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R AR+N+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|261409541|ref|YP_003245782.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
gi|261286004|gb|ACX67975.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
Length = 468
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 234/419 (55%), Gaps = 26/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+A G ++ ++ Y D+ L T PRV+D+ME I + I ++I+ D
Sbjct: 74 KMIRKAEQTGTTVPEVAEKFINAYYEDLDGLGIPRATLNPRVTDNMESIIEFIQELIDRD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDVF+ K +YG+LS Q L+ + G R+ VD RK NP DF LWKAAK GE
Sbjct: 134 FAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVDKRKENPEDFVLWKAAKPGEIY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ YL DIHGGG DL FPHHE E+AQS A +Y
Sbjct: 194 WSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQFPHHECEVAQSEALTGKPLANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGN ++++ E+Y A+R+F++S HYR+PLNYS ++ A
Sbjct: 254 WMHNGYIRINNEKMSKSLGNGVLVKELREQYTKEAVRYFMLSTHYRNPLNYSDEVMEQAQ 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++V + + E L K +++ D I+ + EFH +M DD NT +T
Sbjct: 314 NSVERLANAAANVEHRLGT-AIGSKDDQVSQDVADKISAVLVEFHEKMQDDFNTPDAITA 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
FQ A S N L K+ L E LR NE+ VLRI+
Sbjct: 373 MFQWA-----SEANQL-LKEASIPAADLHEVLRAF-NEMNGVLRIVN------------- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
EL +E++ LI ER ARKNK+++++D+IR L +GI L D + WR
Sbjct: 413 -----NGTDELLDEEIEALIAERVEARKNKNWARADEIRDKLADEGIVLEDTAQGMRWR 466
>gi|187932481|ref|YP_001884454.1| cysteinyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
gi|229558625|sp|B2TIF6.1|SYC_CLOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187720634|gb|ACD21855.1| cysteine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
Length = 470
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 244/428 (57%), Gaps = 41/428 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G + ++Y +EY D LQ T PR ++++E I D + Q+I
Sbjct: 72 KMIKKANEEGTTVKEIGDKYIKEYYEDADKLQIERATVNPRATEYIEDIIDFVAQLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVA--VDSRKRNPADFALWKAAKA 117
AY VEGDV+F +K +YG+LSGQ +E+ + G R + D RK +P DFA+WKA K
Sbjct: 132 YAYEVEGDVYFNTKKFNDYGKLSGQSIEDLQMGASNRTSSIADERKNDPMDFAIWKAQKP 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP+W PWG GRPGWHIECS M+ L DIH GG+DL FPHHENE+AQS A
Sbjct: 192 GEPAWKCPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDLTFPHHENEVAQSEALTGMR 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
+YWMH+ +V NN+KMSKSL NFFT R I + Y +R F++SAHYR +N+S L
Sbjct: 252 FANYWMHSAYVNINNQKMSKSLNNFFTARDILKEYDSDVVRFFMMSAHYRLQINFSKDLL 311
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKLRDEFHARMSDD 292
DSA +V +Y + + E + + +R N + E+ + K R+++ +M DD
Sbjct: 312 DSAKASVERLYNAIGNLENLID------EVSRENISEEEVNYLNSLKKYREKYIEKMDDD 365
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT+ LT F+ K N+++N+ K+ + L+LI L
Sbjct: 366 FNTADALTVLFE-LTKDTNTNINVNSSKELVNKALNLIREL------------------- 405
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
GA +LQ++ +L E+++ LI++R ARKNKDF+ SD+IR DL +GI L D
Sbjct: 406 GAPLGLLQKITKGSL------EDEIESLIQQRQDARKNKDFALSDKIRDDLKDRGIVLED 459
Query: 413 MGKETIWR 420
+ W+
Sbjct: 460 TPQGVRWK 467
>gi|373106799|ref|ZP_09521099.1| cysteine-tRNA ligase [Stomatobaculum longum]
gi|371651738|gb|EHO17164.1| cysteine-tRNA ligase [Stomatobaculum longum]
Length = 469
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/429 (39%), Positives = 239/429 (55%), Gaps = 43/429 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + +S RY E DMA + P +Y PR ++ + + +MI ++I+
Sbjct: 72 KIIKAANEEGVDASVISERYIVECKKDMAGMNVRPASYNPRATEEIPGMIEMIQKLIDGG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKA 117
AYV +G V++ VE P+YG+LS + +E N+AG R V + K +P DF LWK K
Sbjct: 132 HAYVAADGTVYYRVESFPDYGKLSHKNVEENQAGLRTLKVRGEEAKEDPNDFVLWKPKKE 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP W+SPW GRPGWHIECS MS YL DIHGGG DL+FPHHENEIAQS A
Sbjct: 192 GEPYWESPWCEGRPGWHIECSVMSKKYLGETIDIHGGGEDLVFPHHENEIAQSEAVSGKK 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V YWMHN + +N KMSKSLGNF T+RQI+E Y LR F++SAHYRSPLN+S +
Sbjct: 252 FVRYWMHNAFLNIDNVKMSKSLGNFKTVRQISEEYDLQVLRFFMLSAHYRSPLNFSREMM 311
Query: 238 DSAS---DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED---CINKLRDEFHARMSD 291
D A D + + L+DC A K + A E+ + LR++F A M D
Sbjct: 312 DGAKASLDRILTAMEHLRDCLAA-------AKAEALTGAEEEELAAFDALREKFEAAMDD 364
Query: 292 DLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP 351
D NT+ ++ F+ M+K+ + S + +++ + ++L +LGLL
Sbjct: 365 DFNTADAISVIFE-----------MVKRANITVTEESSKAYITRVKELLDKLLDVLGLLS 413
Query: 352 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
++ E + V LI ER ARK K+F+++D+IR +LT GI L
Sbjct: 414 E---------------RKEENLDARVEALIAERQTARKEKNFARADEIRNELTEMGILLE 458
Query: 412 DMGKETIWR 420
D + W+
Sbjct: 459 DTKEGVKWK 467
>gi|152973937|ref|YP_001373454.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
gi|187629791|sp|A7GK01.1|SYC_BACCN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152022689|gb|ABS20459.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 465
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ +++ R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIAERFIEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV++ ++ YG+LS Q +E+ R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYYRTKEFEGYGKLSHQAIEDLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLSFPHHENEIAQSEALTGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y+ L+ + + +H N + + + F A M DD NT++
Sbjct: 314 NGLERIKTTYRNLKHRIESSTDLTDH------NEKWLAEMKEFQSAFEAAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ N+++ + RILGL+
Sbjct: 368 ITELYNLA----NHANQYLLEEHTSK---VVIEAYI---NQLEMLFRILGLV-------- 409
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ EL ++++ LI++R ARKN+DF+ +D+IR DL + I L D + T
Sbjct: 410 --------FTKEELLDKEIEALIQKRIEARKNRDFALADKIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|423439732|ref|ZP_17416638.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|423450111|ref|ZP_17426989.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|423467989|ref|ZP_17444757.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|423537389|ref|ZP_17513807.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB2-9]
gi|423543117|ref|ZP_17519505.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|423626968|ref|ZP_17602743.1| cysteinyl-tRNA synthetase [Bacillus cereus VD148]
gi|401126734|gb|EJQ34468.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|401166817|gb|EJQ74117.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|401250163|gb|EJR56467.1| cysteinyl-tRNA synthetase [Bacillus cereus VD148]
gi|402411856|gb|EJV44219.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|402421913|gb|EJV54157.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|402459095|gb|EJV90833.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB2-9]
Length = 465
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|228937392|ref|ZP_04100038.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228976848|ref|ZP_04137260.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228782818|gb|EEM30984.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228822225|gb|EEM68207.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 420
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWK AK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAELEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|423671539|ref|ZP_17646543.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM034]
gi|401291928|gb|EJR97593.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM034]
Length = 465
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEDLLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQVAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A + N L L++ K +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA-NYANQYL--LEEHTSK----VVIEAYVK---QLETLFSILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R AR+N+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|229113766|ref|ZP_04243201.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|228669637|gb|EEL25044.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
Length = 420
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAFEEAMDDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAKEELLDEEIEVLIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|300311195|ref|YP_003775287.1| cysteinyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
gi|300073980|gb|ADJ63379.1| cysteinyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
Length = 463
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 190/431 (44%), Positives = 247/431 (57%), Gaps = 56/431 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+NR+ D A L P ++PR + ++ Q+ D+I ++ N
Sbjct: 75 KIIKRAVENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATQYVPQMLDLIGKLEKNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P DF LWKAAK EP
Sbjct: 135 LAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLDFVLWKAAKPAEP 194
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
WDSPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQS A Q +
Sbjct: 195 DEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQFPHHENEIAQSEGAHQHT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P LR F++ AHYRSPLNYS L
Sbjct: 255 FVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRFFILRAHYRSPLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHA-----RMSDD 292
D A A+ +Y L+D P Q G A DE HA ++DD
Sbjct: 315 DDARQALTRLYTALKDV-----PPQAGGLVA--------------DEAHAVRLADALNDD 355
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL-- 350
NT + F+ A + +N S + ++ +Q +K + ILGLL
Sbjct: 356 FNTPVAIAVLFELANE-VNRSRSPVQARQ------------------LKALAGILGLLQR 396
Query: 351 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
PG Y LK L E ++ LI R AA+ K+F+++D+IRA+LT GI L
Sbjct: 397 EPGEY------LKGGVAAAEGLGEAEIEALIAARKAAKAGKNFAEADRIRAELTEAGIIL 450
Query: 411 MDM-GKETIWR 420
D G T WR
Sbjct: 451 EDKPGGLTEWR 461
>gi|89893193|ref|YP_516680.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
gi|219666466|ref|YP_002456901.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
gi|122997351|sp|Q250Q6.1|SYC_DESHY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781676|sp|B8G1U2.1|SYC_DESHD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|89332641|dbj|BAE82236.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536726|gb|ACL18465.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
Length = 477
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 233/421 (55%), Gaps = 23/421 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R + G +PL L+ Y EY D A L +P + P+ +DH+ ++ ++I +
Sbjct: 74 KIIKRGQEEGRDPLELAQDYIGEYFKDAAALNLMPASIHPKATDHIPEMIEIIKGLEEQG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+FAV+K P YG+LSG+ LE+ +AG RV V RK+NP DFALWK AK GEP
Sbjct: 134 LAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGERKQNPMDFALWKNAKPGEPF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W+SPWG GRPGWHIECSAMS YL S FDIHGGG DL+FPHHENEIAQ+ +
Sbjct: 194 WESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIAQAEGYLHGETFAR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYRSPL++ L A
Sbjct: 254 YWMHNAFLTINQQKMSKSLGNFFTVREILEHFPGEVIRFYLLGTHYRSPLDFDDENLQMA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ + +++ + AL ++ A + R EF M DD N++
Sbjct: 314 QKGLERLQTSIRLADEALGRQGQNSADAASGQKLRAAAEEARREFAEAMDDDFNSALAYA 373
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG--LLPPGAYSEV 358
F+ + ++N + P E L K + E+ +LG L P +E
Sbjct: 374 SLFE-----LGKAINAHVQAYPYSS-----EGLLKARATLWELADVLGFDLAKPANQAEA 423
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D+ ++ L+E RA ARK KD+ SD IR L GI L D +
Sbjct: 424 GNQKLDQVMEL----------LLEVRAIARKKKDWEMSDLIRDRLKDLGIVLEDTPQGAR 473
Query: 419 W 419
W
Sbjct: 474 W 474
>gi|407708038|ref|YP_006831623.1| 10 kDa chaperonin [Bacillus thuringiensis MC28]
gi|407385723|gb|AFU16224.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis MC28]
Length = 465
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|423608085|ref|ZP_17583978.1| cysteinyl-tRNA synthetase [Bacillus cereus VD102]
gi|401238768|gb|EJR45201.1| cysteinyl-tRNA synthetase [Bacillus cereus VD102]
Length = 465
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLRSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHDEKWLAD------LKKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|157374677|ref|YP_001473277.1| cysteinyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
gi|187631638|sp|A8FTH6.1|SYC_SHESH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157317051|gb|ABV36149.1| Cysteine--tRNA ligase [Shewanella sediminis HAW-EB3]
Length = 459
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 236/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ SL+ R E D L P ++PR + H+ +I DM+ ++I +
Sbjct: 73 KIIKRANENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHIPEIIDMVEKLIEKE 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V P YGRLSGQ L+ +AG RV V+ KR+P DF LWK +K GEP
Sbjct: 133 HAYVSGNGDVLFSVSSFPEYGRLSGQNLDQLQAGARVEVEDTKRDPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQSCCAHNTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDKEKMSKSLNNFFTIRDVLEHYDAATVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ ++++ +A++ + K F M DD NT +
Sbjct: 313 KSALERLYTSLKGLDLSVEA-----------ASADEYVAK----FKVAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKK-KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ + +N LK+ K L + ++KE+ +LG +L
Sbjct: 358 VLFE-----MVREINRLKEADNAKASSLGV---------KLKELADVLG---------IL 394
Query: 360 QQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D K T+E ++ LI ER AR KD+ +D R L G+ L D + T
Sbjct: 395 DQDVDTFFKGEGSTDEVAEIEALIAERNRARAEKDWPAADVARDGLNALGVILEDGPEGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|148653067|ref|YP_001280160.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
gi|187629854|sp|A5WEW9.1|SYC_PSYWF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148572151|gb|ABQ94210.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
Length = 505
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 244/421 (57%), Gaps = 15/421 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE L++R+ + D A L C P +PR ++H++++ DMI +
Sbjct: 96 KIIARANENGEPIGELTHRFIKAMHEDAAALGCENPDAEPRATEHIDEMLDMIGTLEQKQ 155
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV+ YG+LS ++LE+ +AG RV VD+ K+NP DF LWKAAKAGEP
Sbjct: 156 HAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDKKNPFDFVLWKAAKAGEP 215
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W S WG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS AA +
Sbjct: 216 QWASSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFPHHENEIAQSEAATGCTYAH 275
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + + EKMSKSLGNFFTIR++ +++HP +R F++S+HYRS +N+S L A
Sbjct: 276 NWMHVGFINVDGEKMSKSLGNFFTIREVMQKFHPETIRFFILSSHYRSQVNFSDAALKEA 335
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ IYQ L+ + L+ ++ I + +F A M+DD NT ++
Sbjct: 336 HSGLTRIYQALKAADAVLNTSVSAAES--IESINAEHAGTHSADFIAAMNDDFNTPQAIS 393
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + +N L + + ++ + +L I G L P +E LQ
Sbjct: 394 VLFS-----LAKEVNKLARDADDADTQAQLQLQAVQLRALAGILNI-GQLNP---AEFLQ 444
Query: 361 -QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q+ + A ++++E + LI+ER ++ NK+F+++D+IR L GI L D T W
Sbjct: 445 AQIGEVA--EDQMSDEQIEALIQERLDSKANKNFARADEIRDLLQNSGIELEDGKLGTTW 502
Query: 420 R 420
R
Sbjct: 503 R 503
>gi|295094035|emb|CBK83126.1| cysteinyl-tRNA synthetase [Coprococcus sp. ART55/1]
Length = 463
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 241/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G + +S RY E DMA L T P+ ++ + + +M+ +I
Sbjct: 72 KIIKRANEEGVDASVISERYIAEVKKDMAALNVREATTHPKATEEIPDMIEMVKTLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY V G V+F K +YG+LS + +++ R+G R V+ K +P DF LWK K G
Sbjct: 132 YAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSGVDEKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWH+ECS MS Y+ DIH GG DL+FPHHENEIAQS AA
Sbjct: 192 EPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLVFPHHENEIAQSEAANGTEF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YWMHNG + NNEKMSKSLGNFFT+R+I E+Y +R F++SAHYRSPLN+S ++
Sbjct: 252 ARYWMHNGFLKINNEKMSKSLGNFFTVREIAEKYPLQVIRFFMLSAHYRSPLNFSADLVE 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
++ + + I T D ++S G ++ A D ++ ++ A M DDLNT+
Sbjct: 312 ASKNGLERIL-TAVDRLKSIS-----GTEGEVDKAVADEMDAFVKKYEAAMDDDLNTADA 365
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ +K+ N +N+ ++ +L L N V ++ ILG++
Sbjct: 366 ISVIFE-LVKYAN--VNVTEESTKATVELVL--------NTVTKLCDILGIITE------ 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K+ E+ + D+ LIEER AARK K+F+++D+IR L+ GI L D +
Sbjct: 409 ---------KKKEILDSDIEALIEERQAARKAKNFARADEIRDQLSDMGIILEDTREGVK 459
Query: 419 WR 420
W+
Sbjct: 460 WK 461
>gi|54297226|ref|YP_123595.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Paris]
gi|61216143|sp|Q5X5P9.1|SYC_LEGPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53751011|emb|CAH12422.1| cysteine tRNA synthetase [Legionella pneumophila str. Paris]
Length = 456
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 240/425 (56%), Gaps = 51/425 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ G + L+ +Y D L LPP ++PR + H+E I +I +++
Sbjct: 73 KIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV + V+ P YG+LS + +E +G RV + KR+P DF LWK AK GEP
Sbjct: 133 NAYVSDNGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQS AA +
Sbjct: 193 SWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKPFAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSPLNYS L +A
Sbjct: 253 YWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSPLNYSEENLLNA 312
Query: 241 SDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ +YQ ++D + A S E+ +++F+ M+DD NT
Sbjct: 313 KKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQAMNDDFNTPVA 356
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L+ FQ L + K +L +L+ + ILG L
Sbjct: 357 LSVLFQ------------LAHEVNKSNSPALAHTLKNLAG-------ILGFL-------- 389
Query: 359 LQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
Q ++ ++ L EE+ L QLI ER AR ++++K+DQIRADL KGI L D
Sbjct: 390 --QKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRADLLSKGIELEDGAT 447
Query: 416 ETIWR 420
T WR
Sbjct: 448 GTTWR 452
>gi|297545336|ref|YP_003677638.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843111|gb|ADH61627.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 466
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 235/422 (55%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + L+ +Y EY D +L T P+ ++H+E I I +I+
Sbjct: 72 KIIKRAQEENVTTKELAEKYIHEYFKDADNLGIKRATVHPKATEHIEDIVKFIKILIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV G+V+F K +YG+LS + +E +AG R+ ++ K+NP DF LWKA K GEP+
Sbjct: 132 YAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEEKKNPLDFVLWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS A Y
Sbjct: 192 WDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEALYGQQFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G++ NNEKMSKS GNFFT+R+ITE+YHP LR F++ AHYR+P+N+S+ +D A+
Sbjct: 252 WMHIGYLNINNEKMSKSKGNFFTVREITEKYHPEVLRLFMLMAHYRNPINFSLDLMDQAN 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR---MSDDLNTSHI 298
A Y+ L + L K +N + + K + M DD NT+
Sbjct: 312 SA----YERLLNAMANLKHLLTVCKERELNEEEKRIVEKFEEYKKEFEEAMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ A K N +L+ K+ + L + L + ILGL Y V
Sbjct: 368 ISVLFEMA-KTANINLSGNSSKELVKYILDMFLKLSE----------ILGLF----YRTV 412
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ ++ +E++L LIE+R ARK K++ +D+IR L KGI L D +
Sbjct: 413 ----------KTDIDDEEILALIEKRQQARKEKNWKLADEIRDRLREKGIILEDTPEGVR 462
Query: 419 WR 420
W+
Sbjct: 463 WK 464
>gi|350564143|ref|ZP_08932962.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
gi|349778143|gb|EGZ32502.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
Length = 456
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 171/421 (40%), Positives = 240/421 (57%), Gaps = 42/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + E+ SL+ R+ + D L L P +P+ +D + +I+ ++ +I
Sbjct: 74 KIINRAFENQESVQSLTERFIKAMHEDETALNILRPDIEPKATDFIPEIQQLVNTLIEKG 133
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V+ +YGRLSG++ E+ AG RV ++ K++P DF LWKA+K EP
Sbjct: 134 HAYAAPNGDVYFKVKSFESYGRLSGKKQEDLEAGARVEINPNKQDPMDFVLWKASKENEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDS WG GRPGWHIECSAMS + + DIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 194 AWDSAWGQGRPGWHIECSAMSGSCIGERLDIHGGGMDLQFPHHENEIAQSECAHGEHYVN 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V +NEKMSKSL NFFTIR++ + YHP +R+FL+S+HYRSPLNY++ LD A
Sbjct: 254 TWMHVGFVRVDNEKMSKSLNNFFTIREVLKDYHPEVIRYFLLSSHYRSPLNYTIENLDIA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y LQ E L AE+ +F+ M DD NT +
Sbjct: 314 KTNLARLYTALQAAEPGL--------------VAENT--DFEAKFNEAMDDDFNTPQAMA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ L K+ K QQ L+ L+ + N LGLL +E Q
Sbjct: 358 VLFE------------LVKEVNKTQQPGLVALLQSLANR-------LGLL-----TETPQ 393
Query: 361 Q-LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
K + + LT++ + LI ER AR +K++++SD+IR +L KG+ L+D + T W
Sbjct: 394 SFFKSQVGQTDGLTDDAIEALIVERTQARADKNWARSDEIRDELLAKGVELLDGKEGTSW 453
Query: 420 R 420
R
Sbjct: 454 R 454
>gi|423381863|ref|ZP_17359146.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|423543577|ref|ZP_17519935.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401187742|gb|EJQ94814.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401628489|gb|EJS46330.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1O-2]
Length = 465
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAKEELLDEEIEVLIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|384184174|ref|YP_005570070.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410672461|ref|YP_006924832.1| cysteine--tRNA ligase CysS [Bacillus thuringiensis Bt407]
gi|452196467|ref|YP_007476548.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326937883|gb|AEA13779.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409171590|gb|AFV15895.1| cysteine--tRNA ligase CysS [Bacillus thuringiensis Bt407]
gi|452101860|gb|AGF98799.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 465
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWK AK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + AE + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|229136936|ref|ZP_04265563.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|228646474|gb|EEL02681.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
Length = 420
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLRSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDHDEKWLAD------LKKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +I++ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTST---VVIQAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|269798076|ref|YP_003311976.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
gi|269094705|gb|ACZ24696.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
Length = 482
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 171/428 (39%), Positives = 245/428 (57%), Gaps = 33/428 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G + +++NRY Y M L PRVS H+E I MI +I+
Sbjct: 75 KIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDIITMIQTLIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD RK+NP DFALWKAAK GEP
Sbjct: 135 YAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPY 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS C+ Q +V
Sbjct: 195 WESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSG-QHPSV 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 254 RYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEE 313
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL-------RDEFHARMSDD 292
A+ ++L+ A+ + P A D +L +EF A MSDD
Sbjct: 314 AN-------KSLERLSTAIENLL---YLEKCEPGACDEAQRLLEKAKEYEEEFEAAMSDD 363
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT+ + F A +N+ + ++ + E++ +++ K + ++G+L
Sbjct: 364 FNTALATSSMFGLA-----KEINIYYQAVTSREGVVCQEAIAEVKRIFKFMTDVIGVLE- 417
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+ + A EE + ++ R A R+ K ++ +D IR L GI + D
Sbjct: 418 -------KAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIGITIED 470
Query: 413 MGKETIWR 420
+ W+
Sbjct: 471 SPQGARWK 478
>gi|226735064|sp|B8CRG0.1|SYC_SHEPW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212557514|gb|ACJ29968.1| Cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
Length = 459
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 180/423 (42%), Positives = 235/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ SL+ R E D L P ++PR + HM +I +M+ ++I +
Sbjct: 73 KIIKRANENNESCDSLTERLIGEMHRDFDSLNMARPDFEPRATLHMPEIIEMVEKLIARE 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF LWK +K GEP
Sbjct: 133 HAYVAANGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRDPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTKYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDKEKMSKSLNNFFTIRDVLNHYDAATVRYFLLSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ IY L+D ++ + AE I +F M DD NT +
Sbjct: 313 KSGLERIYTALKDLDLTVDA-----------APAEAFIA----QFKRAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N LK QQ +L +L+++ +VL ILG
Sbjct: 358 VLFE-----MVREINRLKLTD-MQQASALGVALKQL----ADVLGILG------------ 395
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D K E ++++V + LI ER AR KD+ +D R L G+ L D + T
Sbjct: 396 QDVDTFFK-GEGSDDEVAEIEALIVERNRARTEKDWPAADVARDGLNALGVILEDGPEGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|406897287|gb|EKD41287.1| hypothetical protein ACD_73C00777G0001 [uncultured bacterium]
Length = 482
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 165/414 (39%), Positives = 238/414 (57%), Gaps = 19/414 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +A G + S++ +Y + D+ L PPT +P+ ++H+E++ +I + N
Sbjct: 74 KIINKAIKEGSDWKSVAEKYIATFHRDVTALGLKPPTIEPKATEHIEEMLSLIGTLEKNG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDVF+ V + +YG+LSG+++E +G R+ + K +P DFALWK +K GEPS
Sbjct: 134 FAYPAGGDVFYKVRQKNDYGKLSGKKIEELESGARIEILEAKTDPLDFALWKGSKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W S WG GRPGWHIECSAMS YL FDIHGGG DL FPHHENEIAQS AA Y
Sbjct: 194 WASHWGEGRPGWHIECSAMSMKYLGETFDIHGGGRDLSFPHHENEIAQSEAATGKLFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNF TIR++ E+YHP LR F+++A YRSPL+Y+ +++A
Sbjct: 254 WLHNGFVNINAEKMSKSLGNFLTIREMLEKYHPEVLRLFILAAQYRSPLDYTEANINNAR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHARMSDDLNTSHI 298
++ Y T + +E + + A+D K L +EF M DD NT+ +
Sbjct: 314 QSLIRWYTTTDRIQ------KECRHLEKTDDGAKDLEKKVLGLMNEFQEAMDDDFNTAKV 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
TG D ++ N L+ K P+ ++ E+ K + EVL + G P +
Sbjct: 368 -TGILFDLVREWNRVLDT-KLAVPQ----AVCEAFFKNVARISEVLGLFGAKP----EDF 417
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
L K + ++ ++ + I +R ARKNKD+ K+D IR +L G+ + D
Sbjct: 418 LNDDKKLQFQSVKIDAAEIEKSIADRNMARKNKDWVKADLIRKELKEHGVEIKD 471
>gi|42779170|ref|NP_976417.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|402554324|ref|YP_006595595.1| cysteinyl-tRNA ligase [Bacillus cereus FRI-35]
gi|61216251|sp|Q73FB7.1|SYC_BACC1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|42735085|gb|AAS39025.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|401795534|gb|AFQ09393.1| cysteinyl-tRNA ligase [Bacillus cereus FRI-35]
Length = 465
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +I++ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIQAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|229074151|ref|ZP_04207197.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
gi|228708921|gb|EEL61048.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
Length = 449
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 58 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 117
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 118 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 177
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 178 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 237
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 238 WMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 297
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 298 NGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAFEEAMDDDFNTANA 351
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 352 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 392
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 393 -------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 445
Query: 419 WR 420
W+
Sbjct: 446 WK 447
>gi|423620302|ref|ZP_17596133.1| cysteinyl-tRNA synthetase [Bacillus cereus VD115]
gi|401248862|gb|EJR55183.1| cysteinyl-tRNA synthetase [Bacillus cereus VD115]
Length = 465
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGVRIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGEGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAKEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
Length = 488
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 239/424 (56%), Gaps = 26/424 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN G + ++S+RY Y M + PRVSDHM+ I DM+ +I+
Sbjct: 82 KIINKANAEGSDWKTISDRYIDAYFQVMDAMHVRRADVYPRVSDHMQDIIDMVQGLIDKG 141
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ DV++ + +YG LSG+++++ AG R+ V+ KRNP DFALWK AK GEP
Sbjct: 142 HAYVLGNDVYYDISTFEHYGALSGRKIDDMLAGARIEVNEGKRNPGDFALWKGAKPGEPF 201
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS HYL FD HGGG DLIFPHHENEIAQS C C+ V
Sbjct: 202 WESPWGKGRPGWHIECSAMSVHYLGKTFDFHGGGSDLIFPHHENEIAQSEGCTGCK--FV 259
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
+YW+HNG +T N+EKMSKSL NFF + + + Y ALR+FL+S YR+PL+YS +LD
Sbjct: 260 NYWLHNGFITINSEKMSKSLNNFFLAKDVLKEYSGDALRYFLLSVQYRNPLDYSRDRLDE 319
Query: 240 ASDAVFYIYQTLQDC-EVALSPFQEHGKTAR-INPAAEDCINKLRDEFHARMSDDLNTSH 297
A + + ++ E+A E +R + AAE+ + FH M DD NT
Sbjct: 320 AEKNMERLSGVIRRLKELAAKEGAEKTDASRSLEKAAEESLKA----FHEAMDDDFNTG- 374
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ TGA D K IN + E++ K +K ++ ILG
Sbjct: 375 LATGAMFDLAKAINIYGTAVDGGLSVDH-----EAVEKAYTALKTIMDILG--------- 420
Query: 358 VLQQLKDKALKRAELTEEDVLQLI-EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L+++ +K + + D++ +I R ARK K + +D+IR L GI + D
Sbjct: 421 ILEEVWEKTDSPDDKSYNDLMDIILAVRQTARKEKMYKIADEIRDRLDAAGIVIEDTPTG 480
Query: 417 TIWR 420
W+
Sbjct: 481 ARWK 484
>gi|160933144|ref|ZP_02080533.1| hypothetical protein CLOLEP_01987 [Clostridium leptum DSM 753]
gi|156868218|gb|EDO61590.1| cysteine--tRNA ligase [Clostridium leptum DSM 753]
Length = 470
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 247/425 (58%), Gaps = 37/425 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR+AN+ + L+++ RY QEY D L T PR ++ MEQI ++I+ ++
Sbjct: 72 KIIRKANEEKTDYLTVAERYIQEYKTDARGLNIREATVHPRATETMEQIIEIISDLVKKG 131
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY E GDV+F K YG+LS Q LE AG R+ V K +P DFALWKAAK GEP
Sbjct: 132 YAYPAENGDVYFRTLKFSGYGKLSHQPLEELEAGARIGVGESKEDPMDFALWKAAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
WDSPWG GRPGWHIECSAM+ YL DIH GG DLIFPHHENEIAQS
Sbjct: 192 YWDSPWGKGRPGWHIECSAMARTYLGDTIDIHCGGQDLIFPHHENEIAQSECCNGVPFAH 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG++ +N KMSKSL NFFT+R++ + + +R+ ++++HYRSP+NYSV L
Sbjct: 252 YWMHNGYINVDNRKMSKSLNNFFTVREVAKEFGYEPIRYLMVASHYRSPINYSVDLLKQC 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTS 296
+ A+ +Y ++ E +S + G+ AR ++ I K +E+ R M DDLNT+
Sbjct: 312 TAALERLYTCRENLEFVVSNAKP-GREAR-----DEEIKKRLEEYQNRFCEAMDDDLNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKK--KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
+ F+ A K IN++L+ K+ ++ L+L SL +LGLL
Sbjct: 366 DAIAVLFELA-KDINTNLSTATNPHKEIAEEALTLFNSLAD----------VLGLL---- 410
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
V + KD +E++ LI+ R ARKNK+++++D+IR +L+ + + L D
Sbjct: 411 --YVKKDTKDS-------LDEEIENLIQRRVEARKNKNWAEADRIRDELSARHVVLEDTP 461
Query: 415 KETIW 419
+ T W
Sbjct: 462 QGTKW 466
>gi|422875372|ref|ZP_16921857.1| cysteinyl-tRNA synthetase [Clostridium perfringens F262]
gi|380303641|gb|EIA15940.1| cysteinyl-tRNA synthetase [Clostridium perfringens F262]
Length = 466
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 241/421 (57%), Gaps = 31/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G + + Y +EY D L T PR ++ + +I + +++
Sbjct: 73 KMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEIIKFVKGLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA+WKA K GEP+
Sbjct: 133 YAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFAIWKAQKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS A + Y
Sbjct: 193 WNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQSEALTGEPFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR LN+S L+SA
Sbjct: 253 WLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQLNFSEDLLESAK 312
Query: 242 DAVFYIYQTLQDCEVALSPF--QEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
+V IY + + E + +E + ++ + +NK ++++ +M DD NT+ +
Sbjct: 313 ASVERIYNAIGNLENLIDEVSREEMNEEEKVYL---ESLNKYKEKYIEKMDDDFNTADAI 369
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
T F D +K N+++ + K+ Q+ L LI L GA +
Sbjct: 370 TAIF-DLIKDTNTNITIDSSKELAQKALELIREL-------------------GAPLGMF 409
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q+ L EE++ LI +R ARK++DF+ +D+IR +L +GI L D + W
Sbjct: 410 QKSTKGNL------EEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVLEDTPQGVRW 463
Query: 420 R 420
+
Sbjct: 464 K 464
>gi|294141771|ref|YP_003557749.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
gi|293328240|dbj|BAJ02971.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
Length = 459
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 236/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ SL+ R E D L P ++PR + HM +I DM+ ++I D
Sbjct: 73 KIIKRAAENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHMPEIIDMVEKLIEKD 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V P YGRLSGQ +E +AG RV V+ KR+P DF LWK +K GEP
Sbjct: 133 HAYVSGNGDVLFSVSSFPEYGRLSGQNIEQLQAGARVEVEDTKRDPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWG GRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A S V+
Sbjct: 193 TWDSPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQSCCAHDTSYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMIDKEKMSKSLNNFFTIRDVLNHYDAGTIRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ ++++ + A + + K F A M DD NT +
Sbjct: 313 KSALERLYTSLKGLDLSVE-----------SADASEFVAK----FKAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N +K S I + + ++KE+ +LGL L+
Sbjct: 358 VLFE-----MVREINRVKG--------SDIAAASALGVKLKELAEVLGL---------LE 395
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D K E ++++V Q LI ER AR KD+ +D R L G+ L D T
Sbjct: 396 QDVDTFFK-GEGSDDEVAQIEALIVERNRARAEKDWPAADIARDGLNALGVILEDGPSGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|325288490|ref|YP_004264671.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324963891|gb|ADY54670.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 476
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 177/426 (41%), Positives = 243/426 (57%), Gaps = 34/426 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA++ PL+L+ RY +EY D L P T P+ +DH++++ ++I +
Sbjct: 74 KIIKRASEENCEPLALAGRYIEEYYKDANALNIQPATVHPKATDHIKEMIEIIKGLEKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY VEGDV+FAVE P YGRLSG+ LE+ +AG RV +D +K NP DFALWK AK GEP+
Sbjct: 134 LAYPVEGDVYFAVEHFPQYGRLSGRNLEDLQAGARVEIDDKKLNPMDFALWKKAKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W SPWG GRPGWHIECSAM+ YL FDIHGGG DL+FPHHENEIAQS +
Sbjct: 194 WPSPWGDGRPGWHIECSAMALKYLGPNFDIHGGGGDLVFPHHENEIAQSEGYLDGEQFAR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N EKMSKSLGNFF IR I +++ +R +L+ HYRSPL++ +L+ A
Sbjct: 254 YWMHNAFITVNQEKMSKSLGNFFMIRDILKKFPGEVVRFYLLGTHYRSPLDFDDEKLEMA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---KLRDEFHARMSDDLNTSH 297
+ + + +++ ALS GK+ + +N K R F M DD N++
Sbjct: 314 ARGLDRLKTSVRLAGEALS----KGKSTDSAGTRGELLNASSKARAAFEEAMEDDFNSAQ 369
Query: 298 ILTGAFQDALKFINSSLN--MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
F D K IN++LN Q + + +LI ++ ILG
Sbjct: 370 AYASLF-DLAKEINTALNEGGWTGAQIAEARDTLI-----------DLAGILGF------ 411
Query: 356 SEVLQQLKDKALKRAELTEED-VLQLI-EERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
LQ KD + E + + V++L+ E RA AR +KD+S +D IR L I L D
Sbjct: 412 --DLQ--KDSEVPAGESGKFNAVMELVLELRAKARADKDWSTADLIRDRLKEASIILEDT 467
Query: 414 GKETIW 419
+ + W
Sbjct: 468 AEGSRW 473
>gi|110803392|ref|YP_699686.1| cysteinyl-tRNA synthetase [Clostridium perfringens SM101]
gi|122956489|sp|Q0SQC1.1|SYC_CLOPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110683893|gb|ABG87263.1| cysteine--tRNA ligase [Clostridium perfringens SM101]
Length = 466
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 237/419 (56%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G + + Y +EY D L T PR ++ + +I + +++
Sbjct: 73 KMIKKANEEGITVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEIIKFVKGLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA+WKA K GEP+
Sbjct: 133 YAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDERKKDPMDFAIWKAQKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS A + Y
Sbjct: 193 WNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQSEALTGEPFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR LN+S L+SA
Sbjct: 253 WLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQLNFSEDLLESAK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+V IY + + E + A + +NK ++++ +M DD NT+ +T
Sbjct: 313 ASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNKYKEKYIEKMDDDFNTADAITA 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K N+++ + K+ Q+ L LI L GA + Q+
Sbjct: 372 IF-DLIKDTNTNITIDSSKELAQKALELIREL-------------------GAPLGMFQK 411
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L EE++ LI +R ARK++DF+ +D+IR +L +GI L D + W+
Sbjct: 412 STKGNL------EEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVLEDTPQGVRWK 464
>gi|269468026|gb|EEZ79749.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
Length = 452
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 176/416 (42%), Positives = 244/416 (58%), Gaps = 41/416 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ SL+NR+ D L LPP +PR +D M+Q+ MI +I
Sbjct: 73 KIIKRAVENKEDIYSLTNRFIDAMHEDERALGVLPPDVEPRATDAMDQMFYMIEALIEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV+++V YG+LSG+ L+ AG RV +++ K++P DF LWK AK EP
Sbjct: 133 IAYQAKNGDVYYSVRDFEGYGKLSGKNLDELEAGARVDIETDKKDPLDFVLWKMAKPSEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS H+L + FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 193 SWSSPWGDGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTFPHHENEIAQSEGANGCTFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V N+EKMSKSL NFFTIR + E Y LR+F++S+HYRSPLN+S L+ A
Sbjct: 253 TWMHVGFVNINDEKMSKSLNNFFTIRVVLESYDGETLRYFIMSSHYRSPLNFSDDNLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFHARMSDDLNTSH 297
++ +Y ++ G +A + AA D +++ D F+A + DD NT
Sbjct: 313 KTSLTRLYTAMR------------GLSA--SDAAMDEVSQRFDFESRFNAALDDDFNTPI 358
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L+ F+ A K +N L++ Q Q +L + L+K+ G Y
Sbjct: 359 ALSILFELA-KAVN-----LQRDQDIDQANALSQLLQKL----------------GGYIG 396
Query: 358 VLQQLKDKALKRA-ELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+LQ D LKR +L +ED+ I++R A+ KDF+ SD IR +L + G+ L D
Sbjct: 397 ILQTDADSFLKRGVDLADEDIDAKIKQRDEAKAYKDFALSDHIRGELPKLGLELKD 452
>gi|289579166|ref|YP_003477793.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
gi|289528879|gb|ADD03231.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
Length = 466
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 235/422 (55%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + L+ +Y EY D +L T P+ ++H+E I + I +I+
Sbjct: 72 KIIKRAQEENVTTKELAEKYIHEYFKDADNLGIKRATVHPKATEHIEDIIEFIKILIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV G+V+F K YG+LS + +E +AG R+ ++ K+NP DF LWKA K GEP+
Sbjct: 132 YAYVVNGNVYFETAKFKGYGKLSHKNIEELQAGARIEINEEKKNPLDFVLWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS A Y
Sbjct: 192 WDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEALYGQQFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G++ NNEKMSKS GNFFT+R+ITE+YHP LR F++ AHYR+P+N+S+ +D A+
Sbjct: 252 WMHIGYLNINNEKMSKSKGNFFTVREITEKYHPEVLRLFMLIAHYRNPINFSLDLMDQAN 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR---MSDDLNTSHI 298
A Y+ L + L K +N + + K + M DD NT+
Sbjct: 312 SA----YERLLNAVANLKHLFTVCKERELNEEEKRIVEKFEEYKKEFEEAMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ A K N +L+ K+ + L + L + ILGL Y V
Sbjct: 368 ISVLFEMA-KTANINLSGNSSKELVKYILDMFLKLSE----------ILGLF----YRSV 412
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ ++ +E++L LIE+R ARK K++ +D+IR L KGI L D +
Sbjct: 413 ----------KTDIDDEEILALIEKRQQARKEKNWKLADEIRDRLREKGIILEDTPEGVR 462
Query: 419 WR 420
W+
Sbjct: 463 WK 464
>gi|163938097|ref|YP_001642981.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|423370672|ref|ZP_17348077.1| cysteinyl-tRNA synthetase [Bacillus cereus VD142]
gi|423473115|ref|ZP_17449857.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-2]
gi|423485389|ref|ZP_17462071.1| cysteinyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|423491114|ref|ZP_17467758.1| cysteinyl-tRNA synthetase [Bacillus cereus CER057]
gi|423502090|ref|ZP_17478707.1| cysteinyl-tRNA synthetase [Bacillus cereus CER074]
gi|423514646|ref|ZP_17491153.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-1]
gi|423514942|ref|ZP_17491423.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|423602381|ref|ZP_17578381.1| cysteinyl-tRNA synthetase [Bacillus cereus VD078]
gi|423665397|ref|ZP_17640536.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM022]
gi|423672657|ref|ZP_17647596.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM062]
gi|229558616|sp|A9VNA2.1|SYC_BACWK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|163860294|gb|ABY41353.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|401073408|gb|EJP81830.1| cysteinyl-tRNA synthetase [Bacillus cereus VD142]
gi|401151484|gb|EJQ58935.1| cysteinyl-tRNA synthetase [Bacillus cereus CER074]
gi|401162039|gb|EJQ69398.1| cysteinyl-tRNA synthetase [Bacillus cereus CER057]
gi|401168443|gb|EJQ75706.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|401225920|gb|EJR32464.1| cysteinyl-tRNA synthetase [Bacillus cereus VD078]
gi|401290304|gb|EJR95999.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM022]
gi|401311517|gb|EJS16812.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM062]
gi|402426613|gb|EJV58734.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-2]
gi|402441580|gb|EJV73530.1| cysteinyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|402442046|gb|EJV73990.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-1]
Length = 465
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEDLLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQVAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFSILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R AR+N+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|228970278|ref|ZP_04130937.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228789387|gb|EEM37307.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
Length = 440
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 49 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWK AK GE
Sbjct: 109 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIF 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 169 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR P+N+S L S +
Sbjct: 229 WMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRHPINFSEELLQSTN 288
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + AE + K + F M+DD NT++
Sbjct: 289 NGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--LEKFQTAFEEAMNDDFNTANA 342
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 343 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 383
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 384 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 436
Query: 419 WR 420
W+
Sbjct: 437 WK 438
>gi|423387424|ref|ZP_17364678.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|423526612|ref|ZP_17503057.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB1-1]
gi|401629007|gb|EJS46835.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|402455652|gb|EJV87433.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB1-1]
Length = 465
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWK AK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + AE + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIDALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|350570254|ref|ZP_08938622.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
gi|349797303|gb|EGZ51070.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
Length = 469
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 177/432 (40%), Positives = 237/432 (54%), Gaps = 50/432 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D A L + P +P+ ++H+ Q+ MI ++I+N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMNEDAAALGVIRPDVEPKATEHVRQMLAMIQRLIDNG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY E GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAK EP
Sbjct: 133 KAYPAENGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKPSEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA----CQ- 175
+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQSC A C
Sbjct: 193 AWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPHHENEIAQSCGAHGGSCGH 252
Query: 176 -------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 228
+S+V YW+HNG + + EKMSKSLGNFFTIR + + Y +R F++ AHYRS
Sbjct: 253 NHGGKTIESHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKAYDAEVVRFFILRAHYRS 312
Query: 229 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 288
PLNYS LD A A+ +Y L++ A E+ N F A
Sbjct: 313 PLNYSDAHLDDAKGALTRLYTALKNTPPAECAVSEN-------------TNDYTRRFFAA 359
Query: 289 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 348
M+DD T + F+ L + K L L+ + + I+G
Sbjct: 360 MNDDFGTVEAVVVLFE------------LANEVNKTNNAELAGCLKALSS-------IIG 400
Query: 349 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 408
LL + L+ L+ A L+ E++ LI +R AR K++++SD+IR LT + I
Sbjct: 401 LLE----RDPLEFLQGCAAS-GSLSNEEIENLIAQRKQARAEKNWAESDRIRDLLTAENI 455
Query: 409 ALMDMGKETIWR 420
L D T WR
Sbjct: 456 ILEDGANGTTWR 467
>gi|228989298|ref|ZP_04149289.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
gi|228995481|ref|ZP_04155149.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228764210|gb|EEM13089.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228770376|gb|EEM18949.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
Length = 420
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 237/422 (56%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV++ ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYYKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR P+N+S L + +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRHPINFSEELLQNTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F A M DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMKKFQVAFEAAMDDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A Q L S +E VK+ + G+L
Sbjct: 323 VTELYNLA-------------NHANQYLLEEHTSKAVLEAYVKQFETLFGILGL------ 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELTKEELLDEEIEVLIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|229009599|ref|ZP_04166825.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|229053936|ref|ZP_04195370.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
gi|229131097|ref|ZP_04260009.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|229165078|ref|ZP_04292873.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
gi|228618341|gb|EEK75371.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
gi|228652310|gb|EEL08235.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|228721354|gb|EEL72875.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
gi|228751621|gb|EEM01421.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
Length = 449
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 58 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 117
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 118 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 177
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 178 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 237
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 238 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEDLLQSTN 297
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 298 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQVAFEEAMDDDFNTANA 351
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 352 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFSILGL--------- 392
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R AR+N+DF+ SDQIR DL + I L D + T
Sbjct: 393 -------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDTAQGTR 445
Query: 419 WR 420
W+
Sbjct: 446 WK 447
>gi|433447291|ref|ZP_20410888.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|431999955|gb|ELK20862.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 465
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 240/430 (55%), Gaps = 51/430 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR A +LGE+ +++ R+ + Y D+ L C PRV+++++ I I Q+I
Sbjct: 74 KLIRAARELGEDVPTIAERFIEAYFEDITALGCKKADVHPRVTENIDTIIQFIEQLIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV++ + +YG+LS Q ++ ++G R+ V +K +P DFALWKAAK GE
Sbjct: 134 YAYEVDGDVYYRTRRFSDYGKLSHQSIDELKSGARIEVGEKKEDPLDFALWKAAKEGEIY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I ++ P LR F++S HYR P+NYS L+SA
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFILVHDIIKQVDPQVLRFFMLSVHYRHPINYSQPLLESAR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
L+ + A + + H + N D I +LR+EF M DD NT+
Sbjct: 314 SG-------LERLKTAYANLK-HRLESSTNLTTNDEQWLAKIEELRNEFIREMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES------LRKIENEVKEVLRILGLL 350
+ + F+ A KQ + L+E ++K + +++ +LGL
Sbjct: 366 NGIAVLFELA----------------KQANVYLMEKHTSQAVIQKFLRQFEQLFDVLGL- 408
Query: 351 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
+L++ EL +E++ LI++R ARKN+DF+ +D+IR +L K I L
Sbjct: 409 ---------------SLQQDELLDEEIEALIQQRIEARKNRDFALADRIRDELKAKNIIL 453
Query: 411 MDMGKETIWR 420
D + T WR
Sbjct: 454 EDTPQGTRWR 463
>gi|431929783|ref|YP_007242829.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
gi|431828086|gb|AGA89199.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
Length = 465
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 235/422 (55%), Gaps = 34/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E +L+ R+ D A L LPP+ +PR + H+++I+ M+ ++
Sbjct: 73 KIIRRAGENDEPIAALTERFIAAMHEDAAALGVLPPSDEPRATAHIDEIQAMVATLLERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++AV + P YG+LSG+ + RAG RV + KR+P DF LWKAAK GEP
Sbjct: 133 LAYRADNGDVYYAVGRFPGYGKLSGKDPQELRAGSRVEIGEAKRDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS A + V
Sbjct: 193 AWESPWGPGRPGWHIECSAMSTCALGAHFDIHGGGADLQFPHHENEIAQSEGATGEPFVE 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V N+EKMSKSLGNFFT+R+I RY P +R+F++++HYRSPLNY L A
Sbjct: 253 VWMHNGFVRVNDEKMSKSLGNFFTVREILARYRPEEVRYFILTSHYRSPLNYDEDHLQQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ L P + G A + FHA M DD T L
Sbjct: 313 RGALTRFYTALR----GLPPAEPAGGEA------------FSERFHAAMDDDFATPEALA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ + +N ++ + + E++ + +LG+L P AY
Sbjct: 357 VLFE-----LVREINRVRADDEARAA--------ALGAELRRLGAVLGILQGDPEAYLRG 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ D + D L E R AAR+ + ++++D++R L GI L D + T
Sbjct: 404 EGLVVDAGPAALDDAAIDALI--ERRTAARQARQWAEADRLRDQLQEAGILLEDGPQGTT 461
Query: 419 WR 420
WR
Sbjct: 462 WR 463
>gi|218885586|ref|YP_002434907.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226735052|sp|B8DKL0.1|SYC_DESVM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218756540|gb|ACL07439.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 485
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 233/422 (55%), Gaps = 15/422 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G ++ +Y + DM L L +PR + H+E++ + ++I D
Sbjct: 72 KIITRANQEGLTSQEVAEKYIATFYEDMDRLNVLRADLEPRATTHIEEMISLCVRLIEQD 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DFALWKAAK GEP
Sbjct: 132 KAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGEEKEDPLDFALWKAAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAMS +L DIHGGG DL+FPHHENEIAQ+ AA V
Sbjct: 192 FWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQTEAALGKDFVR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N EKMSKSLGNF TIR I E Y P LR+FL++ HYRSP++++ +D A
Sbjct: 252 YWVHNGFVQVNAEKMSKSLGNFRTIRDILENYLPETLRYFLLTKHYRSPIDFTFESMDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ IY+ L L +E + + + LR F M DD+NT+ L
Sbjct: 312 EKNLKRIYEALGLLHAELE--REKWTSGPLPKDVTEEFEGLRQAFADAMEDDMNTAAALG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL---PPGAYSE 357
F ++ N L+ K Q K + R + +E +LG+ P G
Sbjct: 370 HVFT-MVRLANRILD--NKGQRKTEGARAF--FRAVLDEAATWFAVLGVFGREPAG---- 420
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
L +L+ + R + V +L++ R AR +KDF+++D IR ++ GI + D
Sbjct: 421 FLAELRACRVARKGIDPAKVEELLQARINARADKDFARADAIRDEIAALGIEVRDTPSGA 480
Query: 418 IW 419
+W
Sbjct: 481 VW 482
>gi|325981668|ref|YP_004294070.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
gi|325531187|gb|ADZ25908.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
Length = 459
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 233/420 (55%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ +L+ R+ Q D L PT++P + H++ + MI+ ++ +
Sbjct: 73 KIIKRAQENNESIEALTQRFIQAMNEDSVALGVSSPTHEPCATHHVKSMIGMISTLVEKN 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F+V P YG+LSG+ L + RAGERV +DS K++P DF LWK+AK+GEP
Sbjct: 133 LAYQAHNGDVYFSVHNFPGYGKLSGKSLNDLRAGERVDIDSSKKDPLDFVLWKSAKSGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWGPGRPGWHIECSAM +L FDIHGGG DL FPHHENEIAQS A V+
Sbjct: 193 FWESPWGPGRPGWHIECSAMCEQFLGEHFDIHGGGQDLQFPHHENEIAQSEGAHDHPFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V +NEKMSKSLGNFFT+R+I + Y P +R F++ AHYRSPLNYS L
Sbjct: 253 YWMHNGFVRVDNEKMSKSLGNFFTVREILKLYQPEVVRFFILRAHYRSPLNYSDQHLKDT 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L++ E I+ A D +F M DD NT +
Sbjct: 313 KLALDRLYIALKEVE-------------PISVARVDWNYPYAQKFKRAMDDDFNTPDAIA 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A S +N ++ +L L ++ +E L+ A SE+
Sbjct: 360 LLFDLA-----SDINKTGSREHAGLLKALGGLLGLLQQNPQEYLQ-----NKAASSEL-- 407
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ DV QLI+ER ARK +S +D IR L +GI L D + T WR
Sbjct: 408 ----------NSSAHDVEQLIQERINARKEGRYSDADTIRKQLQEQGIILEDSSQGTTWR 457
>gi|384177995|ref|YP_005563757.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324324079|gb|ADY19339.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 465
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLRSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +I++ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIQAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|239906952|ref|YP_002953693.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|259511829|sp|C4XSW5.1|SYC_DESMR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239796818|dbj|BAH75807.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 485
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 173/419 (41%), Positives = 234/419 (55%), Gaps = 9/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN G ++ RY + DM L L P +P+ ++++ ++ + ++I++
Sbjct: 72 KIIKKANAEGTTSQEIAERYIATFYEDMDKLGILRPNAEPKATEYIGEMASLAQRLIDSG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V YG+LSG+ +E+ R+G RVA K +P DFALWKA+K GEP
Sbjct: 132 HAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGEEKEDPLDFALWKASKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SP+GPGRPGWH+ECSAMS L DIHGGG DLIFPHHENEIAQS AA
Sbjct: 192 VWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFPHHENEIAQSEAAIGGEFCR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N EKMSKSLGNF TIR I RY P LR FL+S+ YRSPL+YS LD A
Sbjct: 252 YWVHNGFVRINTEKMSKSLGNFITIRDIYARYLPEVLRFFLLSSQYRSPLDYSDQGLDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ IY E AL + ++ + +++ + F A M DDLNT+ +
Sbjct: 312 EKGIKRIYAAKVQMEQALG--RAKWSETKLPADVTEELSRHEEGFTAAMDDDLNTAQAMG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F L + L M K K ++ + E L +I + +LG+ A + L
Sbjct: 370 HVF--GLVRLAGRL-MEDKTLAKSRETA--EVLGRILADFGVWAEVLGVFGTDA-TAFLA 423
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
LK L R + V L+ ER ARK KDF++SD IR +L G+ +MD W
Sbjct: 424 DLKACRLTRLGIDAARVDGLVAERQDARKAKDFARSDAIRDELASLGVTVMDTPTGPQW 482
>gi|333985593|ref|YP_004514803.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
gi|333809634|gb|AEG02304.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
Length = 471
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 181/421 (42%), Positives = 237/421 (56%), Gaps = 41/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ +L+ R+ + D L LPP +P+ + + I +MI +I +
Sbjct: 87 KIIQRANENGEDFAALTERFIEAMHEDERALAVLPPDIEPKATQSIADIINMIAALIGRE 146
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDVF+AV + YG+LSG+ +E+ AGERV VD+ KR+P DF LWK AK GEP
Sbjct: 147 YAYVGANGDVFYAVNRFQGYGKLSGKNIEDLNAGERVDVDNAKRDPLDFVLWKMAKPGEP 206
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 207 YWESPWGHGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQSEGATGEPFVN 266
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V N EKMSKSLGNFFT+R + ++Y P +R F++S+HYRSPLNYS QLD A
Sbjct: 267 YWMHNGFVRVNEEKMSKSLGNFFTVRDVLKQYRPEVIRFFILSSHYRSPLNYSDEQLDDA 326
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ ++ I+ + F M DD NT L
Sbjct: 327 GVALTRLYTALRGVDIV---------DVEIDA-------DYKQRFEQAMDDDFNTPVALA 370
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + LN K L + L + + + G L GA SE
Sbjct: 371 VLFD-----LARELNKADDKTVLAATLKQLAGLLGLLQDDPD-----GFLKGGAGSE--- 417
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKETIW 419
L E + QLI R AA+ NKD++++D IR L +GI L D+ G TIW
Sbjct: 418 ----------SLAEAAIEQLIAARKAAKANKDWAQADAIRDQLKGQGIVLEDVAGGNTIW 467
Query: 420 R 420
R
Sbjct: 468 R 468
>gi|329121962|ref|ZP_08250574.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
gi|327467260|gb|EGF12763.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
Length = 481
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 232/421 (55%), Gaps = 20/421 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN + ++S RY Y M L P VS HME I DM+ +I
Sbjct: 75 KIINKANAEKSDWKTVSTRYIDAYFKVMDALHIRRADIYPYVSKHMEDIIDMVKTLIEKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ DV++ + +Y +LSG+++E+ AG RV V++ KRNP DFALWK AK GEP
Sbjct: 135 HAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVNTAKRNPGDFALWKGAKPGEPF 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS HYL + FD HGGG DLIFPHHENEIAQS A V Y
Sbjct: 195 WESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIFPHHENEIAQSEGATGQKFVKY 254
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+FL+S HYRSPL++S +L+ A
Sbjct: 255 WLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRSPLDFSDERLEEAE 314
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHARMSDDLNTSHIL 299
+ L+D + ++ N + + + +EF M+DD NT +
Sbjct: 315 KNM----SKLKDVIARIKEMEKEDGKVETNESVSLKKAAARTIEEFRQAMNDDFNTG-LA 369
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
TG D +K IN N + +++ ++IE+ + K +L ILG+L SE
Sbjct: 370 TGVLFDFVKDINIYYNAVNSGVAIEKE-AVIEA----KETFKTILDILGILE----SEWN 420
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q L E ++ R ARK K + +D+IR L GI + D W
Sbjct: 421 TQESYAGSDYDALME----MILSVRETARKEKQYKLADEIRDKLAELGIIVEDSATGARW 476
Query: 420 R 420
+
Sbjct: 477 K 477
>gi|357012836|ref|ZP_09077835.1| cysteinyl-tRNA synthetase [Paenibacillus elgii B69]
Length = 465
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/419 (38%), Positives = 238/419 (56%), Gaps = 29/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++A ++G +++ + Q+Y D L T PRV+ +M++I I+ ++ D
Sbjct: 74 KLIKKAAEMGVTVPEVADLFVQKYYEDTKGLGVREATLHPRVTQNMDEIIGFISGLVEKD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDVFF K P YG+LS Q LE + G RV VD RK +P DF LWKAAK GE S
Sbjct: 134 YAYEAGGDVFFRTAKFPEYGKLSHQNLEELQYGIRVDVDERKESPQDFVLWKAAKPGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM YL DIHGGG+DL FPHHE EIAQS +Y
Sbjct: 194 WSSPWGEGRPGWHIECSAMIRKYLGDSIDIHGGGLDLTFPHHECEIAQSEGLTGQRMANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V N+EKMSKSLGN + ++ + +R+F++S HYR+PLN+S ++ A
Sbjct: 254 WMHNGFVNVNDEKMSKSLGNGINVHELLKTIPGEVIRYFMLSGHYRNPLNFSDEAVEQAR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++ I ++C AL + + ++P + + +F ++M+DD NT +T
Sbjct: 314 GSLARI----ENCLSALKHRLKSAEAGEVDPEIAAAVRNAQQQFESKMNDDFNTPDAITA 369
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ +N++ + ++Q L L+ L++ E + ++LG+L P A
Sbjct: 370 VFE----LVNAANPYINREQVTAPTLELL--LKQFE----AMDQVLGILAPEA------- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+L +E++ QLI ER AR+ K+++++D+IR LT +GI L D + WR
Sbjct: 413 --------EDLLDEEIEQLIVERTEARQAKNWARADEIRNLLTERGIVLEDTAQGIRWR 463
>gi|365835886|ref|ZP_09377294.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
gi|364565006|gb|EHM42743.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
Length = 469
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 229/422 (54%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+ R E D L P +PR + H+ +I +++ Q+I
Sbjct: 81 KIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPEIIEIVEQLITRG 140
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV FAV+ P+YG LS Q LE +AG RV + KRNP DF LWK +K GEP
Sbjct: 141 HAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEIADVKRNPMDFVLWKMSKPGEP 200
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 201 SWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVN 260
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS LNYS L A
Sbjct: 261 YWMHSGMVMIDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQLNYSEENLKQA 320
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G ++ PA D + F M DD NT +
Sbjct: 321 RSALERLYTALR------------GTDSKAEPAGGD---EFESRFREAMDDDFNTPEAYS 365
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F + +N LK + Q +L LRK+ +ILGLL P + +
Sbjct: 366 ALFD-----LAREVNRLKSEDMAQAN-ALAAELRKLA-------KILGLLEQDPEVFLQG 412
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + + E LI++R AR KD++ +D R L GI L D + T
Sbjct: 413 GAQADDSEVAQIE-------ALIKQRNDARAAKDWAMADSARDQLNALGIVLEDGPQGTT 465
Query: 419 WR 420
WR
Sbjct: 466 WR 467
>gi|254492695|ref|ZP_05105866.1| cysteinyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
gi|224462216|gb|EEF78494.1| cysteinyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
Length = 463
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 246/426 (57%), Gaps = 44/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE +L+ R+ E D L L P +P+ ++ M +I M+ +I
Sbjct: 73 KIIKRAAENGETIQALTERFIAEMHQDADALGVLRPDLEPKATESMPEILAMVETLIGKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++ V K YG+LSG+++++ RAGER+AV+ K +P DF LWKAAK GEP
Sbjct: 133 LAYKADNGDVYYDVSKFEAYGKLSGRQVDDLRAGERIAVNEAKTDPLDFVLWKAAKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAMSAH L FDIHGGG DL FPHHENEIAQS A +V+
Sbjct: 193 AWESPWGMGRPGWHIECSAMSAHCLGEHFDIHGGGQDLQFPHHENEIAQSEGAHDCQSVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V ++EKMSKSLGNFFT+R++ +Y A+R+F++S+HYRSPLNY+ QL+ A
Sbjct: 253 YWMHNGFVRIDDEKMSKSLGNFFTVREVLAQYPAEAVRYFILSSHYRSPLNYAEDQLEQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD-EFHAR----MSDDLNT 295
A+ Y +L+D E P E +N D EF +R M DD NT
Sbjct: 313 KAALTRFYTSLRDVE----------------PQPE--LNWQDDKEFGSRFAEAMDDDFNT 354
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ L+ + + +LN + L L + +LGL A
Sbjct: 355 ALALS-----VMADVRQALNKALENNEADLAAYLAGLLLSFGD-------VLGLFQQDAE 402
Query: 356 SEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ ++ + AE ++ D + LI ER AR +K++S++D IR L+ GI + D
Sbjct: 403 TFLVGDM-------AEDSDADAIDALIVERNQARADKNWSRADDIRDQLSEMGIVIEDAA 455
Query: 415 KETIWR 420
+T WR
Sbjct: 456 GKTSWR 461
>gi|374298149|ref|YP_005048340.1| cysteinyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
gi|359827643|gb|AEV70416.1| cysteinyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
Length = 467
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 245/422 (58%), Gaps = 31/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L+ ++ EY +D L T P+ +++++ I ++I ++ +
Sbjct: 72 KMIKRANEEGITVKELAEKFINEYFIDAEGLGIGKATVHPKATENIDAIIELIKKLEDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
Y V+GDV+F+ +K YG+LS Q L++ G R+ VD RK++P DFA+WKA K GEP+
Sbjct: 132 FVYNVDGDVYFSTKKFKEYGKLSHQSLDDLELGARIDVDERKQDPMDFAVWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIAQS AA Y
Sbjct: 192 WDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLVFPHHENEIAQSEAATGKPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + +N+KMSKS GNFFT+R+I +++ +R F++SAHYRSP+N+S+ L+ A
Sbjct: 252 WMHNGFINVDNKKMSKSEGNFFTVREIAQKFDYEVIRFFMLSAHYRSPINFSLELLEQAQ 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHARMSDDLNTSHI 298
+++ IY +C L +EH + ++ ++ NK L+ +F M DD+NT+
Sbjct: 312 NSLERIY----NCIDNLLYLREHAEDREMSEVEKEFQNKLLGLKGKFIEAMDDDINTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D +K +NS++ K S R I + ++R LG G
Sbjct: 368 IAAIF-DIVKEVNSNITANSK------------SSRAIIDFSHSLIRELG----GVLGIA 410
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+Q +DK + ++ +LI R ARK K++ +D+IR L GI L D +
Sbjct: 411 QKQKEDK-------LDSEIEELINLRQQARKEKNWKLADEIRDKLKDMGIVLEDTPQGVK 463
Query: 419 WR 420
W+
Sbjct: 464 WK 465
>gi|206978367|ref|ZP_03239240.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217957665|ref|YP_002336209.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
gi|222093860|ref|YP_002527910.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
gi|375282187|ref|YP_005102622.1| cysteinyl-tRNA synthetase [Bacillus cereus NC7401]
gi|423357619|ref|ZP_17335214.1| cysteinyl-tRNA synthetase [Bacillus cereus IS075]
gi|423376318|ref|ZP_17353632.1| cysteinyl-tRNA synthetase [Bacillus cereus AND1407]
gi|423572081|ref|ZP_17548295.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A12]
gi|226735048|sp|B7HQS4.1|SYC_BACC7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765178|sp|B9IZH4.1|SYC_BACCQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206743428|gb|EDZ54862.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217066370|gb|ACJ80620.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
gi|221237908|gb|ACM10618.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
gi|358350710|dbj|BAL15882.1| cysteinyl-tRNA synthetase [Bacillus cereus NC7401]
gi|401074485|gb|EJP82885.1| cysteinyl-tRNA synthetase [Bacillus cereus IS075]
gi|401088775|gb|EJP96957.1| cysteinyl-tRNA synthetase [Bacillus cereus AND1407]
gi|401198803|gb|EJR05716.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A12]
Length = 465
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLRSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHDEKWLAD------LKKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +I++ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIQAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|374263848|ref|ZP_09622394.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
gi|363535691|gb|EHL29139.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
Length = 412
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 239/420 (56%), Gaps = 42/420 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ G L+ Y DM L LPP Y+PR ++H+ I +I +++
Sbjct: 30 KIIARANERGIPIDELTAHYIDAMHEDMRALNILPPNYEPRATEHIATIIRLIERLLARG 89
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV + V+ YG+LS + LE +G RV V KR+P DF LWK AK GEP
Sbjct: 90 NAYVSDNGDVCYQVDSFAEYGKLSHKDLEGLMSGARVEVVKEKRSPLDFVLWKKAKPGEP 149
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ L FDIHGGG+DL FPHHENEIAQS AA +
Sbjct: 150 YWASPWGNGRPGWHIECSAMAIEELGEHFDIHGGGLDLQFPHHENEIAQSEAATHKPFAN 209
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + NNEKMSKSLGNFFTI + ++HP +R+FL+S+HYRS LNYS L +A
Sbjct: 210 YWLHVGMLQVNNEKMSKSLGNFFTIADVLAKHHPEVVRYFLLSSHYRSSLNYSEENLFNA 269
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +YQT++D SP +G + N +EF+ M+DD N+ L+
Sbjct: 270 KKALTRLYQTMKD-----SPVTVNG----------ELDNHWINEFNKAMNDDFNSPVALS 314
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
FQ ++ +N K P + +K + ++GLL + +E LQ
Sbjct: 315 VLFQ-----LSHEVN--KNGTP------------VLATTLKHLAGLMGLLQSDS-AEFLQ 354
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D+ K A + QLI ER AR ++++ ++DQIRA+L +GI L D K T WR
Sbjct: 355 AGFDEDDKAA------IEQLIAERLQARADRNWERADQIRAELLNQGIELEDGAKGTTWR 408
>gi|295694815|ref|YP_003588053.1| cysteinyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
gi|295410417|gb|ADG04909.1| cysteinyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
Length = 476
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/428 (40%), Positives = 230/428 (53%), Gaps = 38/428 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + L+ +Y + Y D A L P QPRV+ HM +I DMI +++
Sbjct: 74 KIIRRAAEEHMAVQDLAEKYIRAYFEDAAALGIEPADVQPRVTMHMHEIIDMIQALLDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++ DV+F + P+YG+LSGQ AG RV VD RKR+P DFALWK +K GE +
Sbjct: 134 FAYRIQEDVYFDTSRDPDYGKLSGQDPAALMAGARVEVDERKRHPLDFALWKGSKPGEVA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMS YL DIH GG DLIFPHHENEIAQS Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMSRTYLGDTLDIHAGGQDLIFPHHENEIAQSECVTGHPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ N KMSKSLGN T+R++ +R P A+R +L+SAHYR PLN+S+ L+ A
Sbjct: 254 WMHNGYLQWNRVKMSKSLGNVVTVRELLKRVRPHAIRLYLLSAHYRHPLNFSLELLEQAD 313
Query: 242 DAVFYIYQTLQDCEVALSP--------FQEHGKTARINPAAE-DCINKLRDEFHARMSDD 292
+ I +L+D L P +E G P E D + ++ +++ M DD
Sbjct: 314 RGLERIESSLRDLGDWLGPDSSLTGAVTEESGHV----PGLEVDEVQRIHEKWTEAMDDD 369
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT+ L GA + + N ++ + K Q L R +GL+
Sbjct: 370 FNTAEAL-GALYEGVGLANRAIREQDVTRAKAWQGWLSYH-----------ARFMGLIAD 417
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
G K +E E + LI RA ARK +D++ +D+IR L+ GI L D
Sbjct: 418 GQ-------------KESETEREKIEALIARRAEARKKRDWAAADRIRDQLSEMGIVLED 464
Query: 413 MGKETIWR 420
WR
Sbjct: 465 TPYGVRWR 472
>gi|168206821|ref|ZP_02632826.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
gi|170661739|gb|EDT14422.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
Length = 466
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 238/419 (56%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G + + Y +EY D L T PR ++ + +I + +++
Sbjct: 73 KMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEIIKFVKGLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA+WKA K GEP+
Sbjct: 133 YAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFAIWKAQKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS A + Y
Sbjct: 193 WNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQSEALTGEPFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR LN+S L+SA
Sbjct: 253 WLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQLNFSEDLLESAK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+V IY + + E + A + +NK ++++ +M DD NT+ +T
Sbjct: 313 ASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNKYKEKYIEKMDDDFNTADAITA 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K N+++ + K+ Q+ L LI R LG P G + +
Sbjct: 372 IF-DLIKDTNTNITIDSSKELAQKALELI--------------RELG-APLGMFQKS--- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ L EE + LI +R ARK++DF+ +D+IR +L +GI L D + W+
Sbjct: 413 ------TKGNLAEE-IEALIAKRQQARKDRDFALADKIRDELKDRGIILEDTPQGVRWK 464
>gi|398832797|ref|ZP_10590948.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
gi|398222691|gb|EJN09059.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
Length = 494
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/424 (41%), Positives = 238/424 (56%), Gaps = 44/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA D GE+ L+ R+ D L P ++PR + ++ Q+ ++I ++ N
Sbjct: 108 KIIKRALDNGESIRQLTERFIVAMNEDADALGVQRPDHEPRATQYVPQMLELIGKLQANG 167
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ E GDV +AV + P YGRLSG+ L++ RAGERV V++ KR+P DF LWKAAK GEP
Sbjct: 168 LAYLAEDGDVNYAVREFPGYGRLSGKSLDDLRAGERVDVNTGKRDPLDFVLWKAAKQGEP 227
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
WDS WG GRPGWHIECSAM+ L FDIHGGG DL FPHHENEIAQS A +
Sbjct: 228 DEAKWDSAWGCGRPGWHIECSAMAGDLLGEHFDIHGGGQDLQFPHHENEIAQSEGAHGHA 287
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P +R F++ AHYRSPLNYS L
Sbjct: 288 FVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLQKYDPEVVRFFILRAHYRSPLNYSDAHL 347
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A A+ +Y L++ A S + R A M+DD NT
Sbjct: 348 DDARQALTRLYTALKEVPPAASGSTDEAPARRFAEA---------------MNDDFNTPL 392
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L+ F+ + + +N + +Q L L ++ + + L+ G + G
Sbjct: 393 ALSVLFE-----LANEVNRTRSADASRQLRQLGARLGLLQRDPEAFLK--GGVAAGG--- 442
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKE 416
+ + + LI R+AA+ +DF+ +D+IRA+LT G+ L D G
Sbjct: 443 --------------IDQAAIEALIAARSAAKAGRDFAAADRIRAELTAAGVVLEDKPGGL 488
Query: 417 TIWR 420
T WR
Sbjct: 489 TEWR 492
>gi|317491067|ref|ZP_07949503.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920614|gb|EFV41937.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 461
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 227/422 (53%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+ R E D L P +PR + H+ +I +++ Q+I
Sbjct: 73 KIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPEIIEIVEQLITRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV FAV+ P+YG LS Q LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVADVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSLGNFFTIR + E Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDREKMSKSLGNFFTIRDVLEHYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G + PA D F M DD NT +
Sbjct: 313 RSALERLYTALR------------GTEPQAEPAGGDVFEA---RFREAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F + +N LK + Q +L LRK+ +ILGLL P + +
Sbjct: 358 ALFD-----LAREVNRLKSEDMAQAN-ALAAELRKLA-------KILGLLEQDPEVFLQG 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + + E LI++R AR KD++ +D R L GI L D + T
Sbjct: 405 GAQADDSEVAQIE-------ALIKQRNDARAAKDWAMADSARDQLNALGIVLEDGPQGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|381151336|ref|ZP_09863205.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
gi|380883308|gb|EIC29185.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
Length = 477
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/432 (41%), Positives = 243/432 (56%), Gaps = 42/432 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ L+ R+ D L LPP +PR + + I MI ++
Sbjct: 73 KIIQRANENGEDFNRLTARFIDAMHEDERALAVLPPDIEPRATQSIASIIAMIEALLAKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ GDVF+AVEK +YG+LSG++LE +AGERV VD+ K+NP DF LWK AKA EP
Sbjct: 133 YAYIGSSGDVFYAVEKFRDYGKLSGKKLEELQAGERVDVDAAKQNPFDFVLWKMAKANEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW +PWG GRPGWHIECSAMS L + FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 193 SWPAPWGDGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPHHENEIAQSEGATGEKFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V N EKMSKSLGNFFT+R++ ++Y P +R F++S+HYRSPLNYS QL+ +
Sbjct: 253 LWMHNGFVRVNEEKMSKSLGNFFTVREVLKQYRPEIIRFFILSSHYRSPLNYSDEQLNES 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ A+ +Y + G TA P D R F M+DD NT ++
Sbjct: 313 ATALNRLYTA------------QRGVTAPDAPILPD----YRGRFEQAMNDDFNTPVAVS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL--------LPP 352
F + LN K K +E + +K++ +LG+ L
Sbjct: 357 VLFD-----LARELNKAKTKD--------VEQAGQFAASLKQLGGLLGILQDDPEAWLKS 403
Query: 353 GAY-SEVLQQLKDKALKRAELTEEDVL--QLIEERAAARKNKDFSKSDQIRADLTRKGIA 409
GA+ S V + A++ DV + I+ R A+K K ++ +DQIR L +GI
Sbjct: 404 GAFHSAVYESATAGDWVSADVMRGDVWIERQIQARLDAKKAKSWALADQIRNQLKEQGII 463
Query: 410 LMDMGKETI-WR 420
L D T WR
Sbjct: 464 LEDAPNGTTNWR 475
>gi|377555852|ref|ZP_09785580.1| cysteinyl-tRNA synthetase [endosymbiont of Bathymodiolus sp.]
Length = 434
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/434 (40%), Positives = 243/434 (55%), Gaps = 52/434 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ +L+NR+ D L LPP +PR +D ++Q+ MI +I
Sbjct: 36 KIIQRAVENKEDIYALTNRFIAAMHEDEQALGILPPDIEPRATDAIDQMFYMIESLIEKG 95
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV+++V K NYG+LSG+ L+ AG RV +++ K++P DF LWK AK EP
Sbjct: 96 IAYQGKNGDVYYSVRKFKNYGKLSGKNLDELEAGARVNIETSKQDPLDFVLWKMAKPNEP 155
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS +L FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 156 SWQSPWGDGRPGWHIECSAMSCTHLGKHFDIHGGGMDLAFPHHENEIAQSEGANDCTFVN 215
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V NNEKMSKSL NFFTIR + E Y LR+F++S+HYRSPLN+S LD+A
Sbjct: 216 TWMHVGFVNINNEKMSKSLNNFFTIRGVLENYDGETLRYFIMSSHYRSPLNFSDENLDNA 275
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS----DDLNTS 296
++ +Y + + + +E + R ++ AR++ DD NT
Sbjct: 276 KASLTRLYTATRGLSASAAATEEVSQ---------------RFDYEARLTAALDDDFNTP 320
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
L+ F+ A K +N+ K+K+ Q +L + L+K+ G Y
Sbjct: 321 IALSILFELA-KVVNA-----KRKKDSDQANALGQLLKKL----------------GGYI 358
Query: 357 EVLQQLKDKALKRAE----------LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 406
+LQ D LK L++ + I++R AR NK+F+ SDQIR +L
Sbjct: 359 GILQMEGDVFLKHTSQGSTEKRGVGLSDTQIDAKIDKRNQARNNKNFNLSDQIRDELAEL 418
Query: 407 GIALMDMGKETIWR 420
GI L D T WR
Sbjct: 419 GIILEDNADATTWR 432
>gi|237808667|ref|YP_002893107.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|259511845|sp|C4LG04.1|SYC_TOLAT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|237500928|gb|ACQ93521.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 463
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/430 (40%), Positives = 237/430 (55%), Gaps = 53/430 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ +L+ R + D L+ P +PR + H+ +I ++ +++ +
Sbjct: 73 KIIKRAAENAESCDALTERLIGDMHADFDALKLQRPDIEPRATQHIGEIITLVQSLLDQN 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F+++ P YGRLSGQ +E +AG RV V+ KRNP DF LWK +K GEP
Sbjct: 133 YAYVADSGDVLFSIDSFPEYGRLSGQNIEQLQAGARVDVEESKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
WDSPWG GRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 MWDSPWGAGRPGWHIECSAMNSKHLGHHFDIHGGGSDLQFPHHENEIAQSCCAHHTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRSPLNYS L L A
Sbjct: 253 TWMHSGMVMVDEEKMSKSLGNFFTIRDVLKVYDAETVRYFLMSGHYRSPLNYSDLNLQQA 312
Query: 241 SDAVFYIYQTLQDCE-----VALS-PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLN 294
++ +Y L+ E ALS PF E F A M DD N
Sbjct: 313 RASLERLYTALRGVEDGEEQAALSAPFDE--------------------RFKAAMDDDFN 352
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T + F + LN K+ P ++L LR++ +LGL
Sbjct: 353 TPEAYSVLFD-----LARDLNRAKQDSPA-DAVALAACLRRLGG-------VLGL----- 394
Query: 355 YSEVLQQLKDKALKRAELTEED----VLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
LQQ ++ L+ E D + LI+ R AR +K+++ +D+ R LT GI L
Sbjct: 395 ----LQQQPEQFLQSGAAAETDDVAEIELLIKTRNDARASKNWALADEARNKLTEMGIVL 450
Query: 411 MDMGKETIWR 420
D + T WR
Sbjct: 451 EDGPQGTTWR 460
>gi|423073155|ref|ZP_17061898.1| cysteine--tRNA ligase [Desulfitobacterium hafniense DP7]
gi|361855985|gb|EHL07919.1| cysteine--tRNA ligase [Desulfitobacterium hafniense DP7]
Length = 477
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 233/421 (55%), Gaps = 23/421 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R + G +PL L+ Y EY D A L +P + P+ +DH+ ++ ++I +
Sbjct: 74 KIIKRGQEEGRDPLELAQDYIGEYFKDAAALNLMPASIHPKATDHIPEMIEIIKGLEEQG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+FAV+K P YG+LSG+ LE+ +AG RV V RK+NP DFALWK AK GEP
Sbjct: 134 LAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGERKQNPMDFALWKNAKPGEPF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W+SPWG GRPGWHIECSAMS YL S FDIHGGG DL+FPHHENEIAQ+ +
Sbjct: 194 WESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPHHENEIAQAEGYLHGETFAR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N +KMSKSLGNFFT+R+I E + +R +L+ HYRSPL++ L A
Sbjct: 254 YWMHNAFLTINQQKMSKSLGNFFTVREILEYFPGEVIRFYLLGTHYRSPLDFDDENLRMA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ + +++ + AL ++ A + R EF M DD N++
Sbjct: 314 QKGLERLQTSIRLADEALGRQGQNSADAAPEQKLRAAAEEARREFEEAMDDDFNSALAYA 373
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG--LLPPGAYSEV 358
F+ + ++N + P E L K + E+ +LG L P +E
Sbjct: 374 SFFE-----LGKAINAHVQAYPYSS-----EGLLKARATLWELADVLGFDLAKPANQAEA 423
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D+ ++ L+E RA ARK KD+ SD IR L GI L D +
Sbjct: 424 GNQKLDQVMEL----------LLEVRAIARKKKDWEMSDLIRDRLKDLGIVLEDTPQGAR 473
Query: 419 W 419
W
Sbjct: 474 W 474
>gi|332982044|ref|YP_004463485.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
gi|332699722|gb|AEE96663.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
Length = 467
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 236/422 (55%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN G L +R+ QEY VD L P PR ++H+ + + I ++I+
Sbjct: 73 KMIKRANQEGITVKELGDRFIQEYFVDAKGLNIRPADVHPRATEHITDMIEFIKKLIDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+G+V+F K P YG+LS Q AG RV V+ KRNP DF LWKA K GEP+
Sbjct: 133 VAYVVDGNVYFDTSKFPQYGKLSHQDFNEIEAGARVEVNESKRNPMDFVLWKAQKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWH+ECS MS YL DIHGGG DLIFPHHENEIAQS + +
Sbjct: 193 WDSPWGMGRPGWHMECSVMSMKYLGDTIDIHGGGQDLIFPHHENEIAQSESLTGKPLARF 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ + +KMSKSLGNFFT+R I++ Y +R F++ +HYRSP+N+S L+ A
Sbjct: 253 WLHNGYINVDGQKMSKSLGNFFTVRDISKEYDLETVRIFMLLSHYRSPINFSHQLLEQAK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
+A+ +Y + + L + + ++ IN + R +F M DD+NT+
Sbjct: 313 NALARLY----NVKFRLEDIKNSSDISAVSEQERAFINDMPRYRQKFIEAMDDDMNTASA 368
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F A +N+L + S + + +KE+ ++GLL
Sbjct: 369 MGVIFDLA-----KDVNILMADGASAEFAS------EASDMLKELTGVMGLL-------- 409
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
KD A + + ++ Q+I++R AR N+D++ +D+IR +L GI L D +
Sbjct: 410 ---YKDSACSQ---LDNEIEQMIQKRQQARANRDWATADRIRDELKAMGIVLEDTPQGVR 463
Query: 419 WR 420
W+
Sbjct: 464 WK 465
>gi|452852528|ref|YP_007494212.1| Cysteinyl-tRNA synthetase [Desulfovibrio piezophilus]
gi|451896182|emb|CCH49061.1| Cysteinyl-tRNA synthetase [Desulfovibrio piezophilus]
Length = 485
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/423 (39%), Positives = 243/423 (57%), Gaps = 17/423 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN++G+ ++ ++ E+ VDM L +P+ ++H+ ++ + +I D
Sbjct: 72 KIIKRANEVGKEAGEIAEKFIGEFYVDMDRLSVNRADIEPKCTEHIPEMIALTQHLIETD 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V +YG+LSG+ ++ +G R+A K++P DFALWK AK GEP
Sbjct: 132 HAYATPSGDVYFRVRSFEDYGKLSGRNVDELESGARIAPGEEKQDPLDFALWKGAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWH+ECSAMS Y DIHGGG DL FPHHENEIAQS AA
Sbjct: 192 SWESPWGQGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFPHHENEIAQSEAATGKPFAK 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N+EKMSKSLGNFFTIR I +++ P LR+FL++ HYRSPL++S L+ A
Sbjct: 252 YWVHNGFVQINSEKMSKSLGNFFTIRDILDKFLPETLRYFLLTMHYRSPLDFSFEALEEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTS 296
+ IY L +V L+ Q + +P E+ + +L DE M DD+NT+
Sbjct: 312 EKGIKRIYSALAQADVELAKTQ-----WKKSPFPEELVTEL-DEIEKHWVEAMEDDMNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
GA I + +++ K ++ + + L +I +++K +LG+
Sbjct: 366 ----GALGHVFSAIRLTGRIVEDKNLRKSEGGR-DMLLRIMDDMKTWGAVLGIFECQP-E 419
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ L +L+D R+++ V +L+ R AR NKDF KSD IR +L + + D +
Sbjct: 420 DFLVELRDNRAVRSDIDPVRVQKLLGARKEARANKDFEKSDAIRDELMAMKVEVKDTPQG 479
Query: 417 TIW 419
W
Sbjct: 480 ATW 482
>gi|296106895|ref|YP_003618595.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
gi|295648796|gb|ADG24643.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
Length = 413
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/425 (40%), Positives = 238/425 (56%), Gaps = 51/425 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ + L+ +Y D L LPP ++PR + H+E I +I +++
Sbjct: 30 KIIARASERDVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKG 89
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF LWK AK GEP
Sbjct: 90 SAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEP 149
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQS AA +
Sbjct: 150 SWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKPFAN 209
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSPLNYS L +A
Sbjct: 210 YWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSPLNYSEENLLNA 269
Query: 241 SDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ +YQ ++D + A S E+ +++F+ M+DD NT
Sbjct: 270 KKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQAMNDDFNTPVA 313
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L+ FQ L + K +L +L+ + ILG L
Sbjct: 314 LSVLFQ------------LAHEVNKSNSPALAHTLKNLAG-------ILGFL-------- 346
Query: 359 LQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
Q ++ ++ L EE+ L QLI ER AR ++++K+DQIR DL KGI L D
Sbjct: 347 --QKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRTDLLSKGIELEDGAT 404
Query: 416 ETIWR 420
T WR
Sbjct: 405 GTTWR 409
>gi|338533810|ref|YP_004667144.1| cysteinyl-tRNA synthetase [Myxococcus fulvus HW-1]
gi|337259906|gb|AEI66066.1| cysteinyl-tRNA synthetase [Myxococcus fulvus HW-1]
Length = 489
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 249/421 (59%), Gaps = 16/421 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A + GE P++L+ RY + + D L L P + P+VSDH+ +I +I ++++
Sbjct: 77 KIIKAAAETGEAPVALAARYVEIFREDTRALHLLEPDFAPKVSDHLPEIIAIIQKLVDKG 136
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+V +Y +LS + L++ GERV +KR P DFALWKAAK GEP+
Sbjct: 137 HAYASQGDVYFSVSSDADYAKLSRRNLDDLCVGERVQPGEQKREPLDFALWKAAKPGEPA 196
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQS +A S Y
Sbjct: 197 WDSPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQSESANGVSFARY 256
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + KMSKSLGN +R + P ALR F ++ HYR PL++S L A
Sbjct: 257 WMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLATHYRHPLSFSDKALADAE 316
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ Y Y+TL+ + +S GK P D + EF + M DD NT+ L
Sbjct: 317 TRMEYFYETLRKVDERIS-----GKDFGKGPLHGDP-RRFFTEFESAMDDDFNTAGGL-- 368
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVL 359
AL + +N L K P + + + +L+ + +V+ V +LGL P A+ L
Sbjct: 369 ---GALSGLFGMMNELTDKPPVKDKALVGRTLQALREDVRRVSGVLGLFEDAPDAW---L 422
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ +++A++ + V +L+ ER AAR KDF+ +D++R++L ++G+ +MD T W
Sbjct: 423 LRRRERAVRERGIDVAAVERLLGERTAARAAKDFAAADRVRSELKQQGVEIMDTPAGTTW 482
Query: 420 R 420
+
Sbjct: 483 K 483
>gi|229003104|ref|ZP_04160954.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228758150|gb|EEM07345.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
Length = 440
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 237/422 (56%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++
Sbjct: 49 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV++ ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 109 YAYESEGDVYYKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 169 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y+P +R F++S HYR P+N+S L + +
Sbjct: 229 WMHNGYININNEKMSKSLGNFILVHDIIKQYNPQLIRFFMLSVHYRHPINFSEELLQNTN 288
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F A M DD NT++
Sbjct: 289 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMKKFQVAFEAAMDDDFNTANA 342
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A Q L S +E VK+ + G+L
Sbjct: 343 VTELYNLA-------------NHANQYLLEEHTSKAVLEAYVKQFETLFGILGL------ 383
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 384 -------ELTKEELLDEEIEVLIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 436
Query: 419 WR 420
W+
Sbjct: 437 WK 438
>gi|423526408|ref|ZP_17502857.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA4-10]
gi|401163458|gb|EJQ70804.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA4-10]
Length = 465
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEDLLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQVAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFSILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R AR+N+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDTVQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|423596979|ref|ZP_17572989.1| cysteinyl-tRNA synthetase [Bacillus cereus VD048]
gi|401218156|gb|EJR24840.1| cysteinyl-tRNA synthetase [Bacillus cereus VD048]
Length = 465
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 243/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEDLLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + + + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMERFQVAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFSILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R AR+N+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|54294205|ref|YP_126620.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Lens]
gi|61216142|sp|Q5WX29.1|SYC_LEGPL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53754037|emb|CAH15510.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
gi|307610020|emb|CBW99553.1| cysteine tRNA synthetase [Legionella pneumophila 130b]
Length = 456
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 239/425 (56%), Gaps = 51/425 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ + L+ +Y D L LPP ++PR + H+E I +I +++
Sbjct: 73 KIIARASERDVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF LWK AK GEP
Sbjct: 133 NAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQS AA +
Sbjct: 193 SWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKPFAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSPLNYS L +A
Sbjct: 253 YWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSPLNYSEENLLNA 312
Query: 241 SDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ +YQ ++D + A S E+ +++F+ M+DD NT
Sbjct: 313 KKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQAMNDDFNTPVA 356
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L+ FQ L + K +L +L+ + ILG L
Sbjct: 357 LSVLFQ------------LAHEVNKSNSPALAHTLKNLAG-------ILGFL-------- 389
Query: 359 LQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
Q ++ ++ L EE+ L QLI ER AR ++++K+DQIRADL KGI L D
Sbjct: 390 --QKDPESFLQSGLAEEEKLVIEQLIAERLKARAERNWTKADQIRADLLSKGIELEDGAT 447
Query: 416 ETIWR 420
T WR
Sbjct: 448 GTTWR 452
>gi|430748585|ref|YP_007211493.1| cysteinyl-tRNA synthetase [Thermobacillus composti KWC4]
gi|430732550|gb|AGA56495.1| cysteinyl-tRNA synthetase [Thermobacillus composti KWC4]
Length = 482
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 240/428 (56%), Gaps = 33/428 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+A D+G ++ +Y + D+ L T PRV H+ QI I ++
Sbjct: 77 KLIRKAADIGSTVPEVAEKYIAAFNEDIEALGVRKATVNPRVMHHIPQIIAFIQGLVERG 136
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F K P YG+LS Q E + G R+ V +K NP DFALWKAAK GE
Sbjct: 137 YAYESGGDVYFRTLKFPEYGKLSHQNPEELQYGIRIEVGEKKENPQDFALWKAAKPGEIF 196
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAM+ Y DIHGGG DL FPHHE E+AQS + Y
Sbjct: 197 WESPWGPGRPGWHIECSAMAREYAGDTLDIHGGGHDLQFPHHECEVAQSESFTGKPLARY 256
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGN T++++ +R P A+R+F++S HYRSPLN++ + A
Sbjct: 257 WMHNGYIHINNEKMSKSLGNGITVKELLKRTKPAAVRYFMLSTHYRSPLNFTDETIRQAE 316
Query: 242 DAVFYIYQTLQDCEVALSPFQEHG----KTARIN-----PAAEDCINKLRDEFHARMSDD 292
+++ I + L+ G + AR + P + I ++R FH +MSDD
Sbjct: 317 NSIERIVNCHVNLNHRLAALGSRGAAEAEQARASGSTGEPELDQRIAEIRARFHEKMSDD 376
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT +T F D + N +L K++ LS +R + +E++ + R+LG LPP
Sbjct: 377 FNTPDAVTALF-DLVSEANQAL--------KREVLSG-AVIRVLLDEMEAMDRVLGFLPP 426
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
A+L +E++ +LI ER AR+NK+++++D+IR L +GI L D
Sbjct: 427 A--------------DAAQLEDEEIERLIAERTEARRNKNWARADEIRDLLANRGILLED 472
Query: 413 MGKETIWR 420
+ WR
Sbjct: 473 TPQGVRWR 480
>gi|427414123|ref|ZP_18904313.1| cysteine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
gi|425714499|gb|EKU77502.1| cysteine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
Length = 484
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/424 (42%), Positives = 246/424 (58%), Gaps = 23/424 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G + +++NRY Y M L PRVS+H+++I MI+ +I
Sbjct: 75 KIINTSNGEGVSWDTIANRYIDSYFEVMDALHVRHADVYPRVSEHIDEIIAMISTLIEKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+++VEK +YG+LSG+ L++ AG RV VD RK+NP DFALWK+AK GEP
Sbjct: 135 FAYELDGDVYYSVEKFEDYGKLSGRTLDDMEAGARVDVDDRKQNPMDFALWKSAKPGEPY 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECS MS YL +FD HGGG DLIFPHHENEIAQS C S V
Sbjct: 195 WESPWGNGRPGWHIECSTMSNKYLGEEFDFHGGGSDLIFPHHENEIAQSEGCTGHHPS-V 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N EKMSKSL NFF ++ I + Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 254 RYWLHNGFITINQEKMSKSLNNFFLVKDILKEYSPDALRYFLMSTHYRSPLDFSDERLEE 313
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A+ ++ + +Q+ + QE G+ A D K +EF MSDD NT+ L
Sbjct: 314 ANKSLERMTTAIQN--LLYLENQEEGECDEEAKALLDNARKYAEEFEEAMSDDFNTA--L 369
Query: 300 TGAFQDAL-KFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
GA L K IN ++ K E+L ++ N K + I+G +
Sbjct: 370 AGAPMFGLAKEINIYYQAVQNCNGKVCH----ETLAEVRNIFKMMTDIIG---------I 416
Query: 359 LQQLKDKALKRAELTE-EDVLQLI-EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
L+Q + A E E ++Q+I R AR+ K + +D IR +L GI + D +
Sbjct: 417 LEQAWEGPQSGAGAEEYEKLMQVILNVRQNAREQKLWDLADAIRDELGNIGIVIEDSPQG 476
Query: 417 TIWR 420
W+
Sbjct: 477 ARWK 480
>gi|365873642|ref|ZP_09413175.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
gi|363983729|gb|EHM09936.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
Length = 467
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/419 (39%), Positives = 240/419 (57%), Gaps = 28/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN++G L++++ + Y D L T P+ ++ + I ++I +I
Sbjct: 74 KMINRANEMGITVKELADKFIEAYYQDADALGIKRATVNPKATEEIPHIIELIEILIRKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F V+ P YG+L Q LE +AG R+ VD RKR+P DFALWKA K GEP+
Sbjct: 134 HAYQVDGDVYFDVKSYPAYGKLIRQDLEELQAGARIDVDPRKRHPLDFALWKAQKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM H+L DIHGGG DL+FPHHENEIAQS AA V Y
Sbjct: 194 WESPWGLGRPGWHIECSAMCRHHLGETIDIHGGGCDLVFPHHENEIAQSEAATGKPFVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ + EKMSKSLGNF T R + ++HPLA+R F++SAHYRSP+N+S L A
Sbjct: 254 WVHNGYLMIDKEKMSKSLGNFMTARDVISKFHPLAVRLFMLSAHYRSPINFSEDNLRQAQ 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ + + AL G + + A + R++F M DDLNT+ +
Sbjct: 314 GALERLRNGWAEISFALKRQDSGGISEELRSAVRES----REQFLNAMDDDLNTAEAIGA 369
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F I S+ + + + P +E+L + +++V RI+G++
Sbjct: 370 VF----ALIRSANSHIGSQSPLD-----LEALNEAARFLQDVDRIMGII----------- 409
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
++ A+ + ++ +LI R ARK ++F ++D IR L GI L D + T W+
Sbjct: 410 ----GIENAQALDHEIEELIHRRNQARKERNFKEADAIRDKLLSMGIVLEDTPQGTRWK 464
>gi|423480234|ref|ZP_17456924.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
gi|401149239|gb|EJQ56714.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
Length = 465
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/425 (39%), Positives = 237/425 (55%), Gaps = 41/425 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSANLTDH------NEKWLAEMEKFQAAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A Q L E K+ GAY +
Sbjct: 368 ITELYNVA---------------NHANQYLLEEHTSKV--------------VIGAYVKQ 398
Query: 359 LQQLKD---KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
L+ L D L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D +
Sbjct: 399 LETLFDILGLELAQEELLDEEIETLIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQ 458
Query: 416 ETIWR 420
T W+
Sbjct: 459 GTRWK 463
>gi|297582426|ref|YP_003698206.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
gi|297140883|gb|ADH97640.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
Length = 467
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 246/423 (58%), Gaps = 36/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+L E+ ++++ RY Y D L PRV++ M+ I IT++I+
Sbjct: 74 KIIKAANELDEDVMTVAERYIAAYYNDTEALGVRKADLHPRVTESMDDIITFITRLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F K YG+LS Q L++ +AG R+ V+ +K +P DF LWK AK GE +
Sbjct: 134 YAYESSGDVYFRTRKFDTYGQLSQQSLDDLQAGARIQVEEKKEDPLDFVLWKTAKEGEIA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM +L DIH GG DL FPHHENEIAQS A + +Y
Sbjct: 194 WSSPWGEGRPGWHIECSAMVKKHLGDTIDIHAGGQDLSFPHHENEIAQSEALNEQRMANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSL NF + I ++ P +R F+++AHYRSP+N+S QL++A
Sbjct: 254 WIHNGYINIDNEKMSKSLNNFILVHDIIRQFDPDVVRFFIVNAHYRSPINFSDEQLETAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---FHARMSDDLNTSHI 298
++ I T ++ L G++A + + +R E F A M DD N+++
Sbjct: 314 TSLERIQTTYENLTYRL------GESADLGGGQDKWFALIRKEGERFIASMDDDFNSANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D ++ +++ + +K K+ ++E+ K +++ VL I
Sbjct: 368 VAVMF-DLVR--QANIYLTEKHTSKE----VLEAFLKQFDDMAFVLGI------------ 408
Query: 359 LQQLKDKALKR-AELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
A+KR AEL +EDV QLIEER ARK++DF+++D+IR L +GI L D + T
Sbjct: 409 -------AVKRQAELLDEDVEQLIEERIQARKDRDFARADEIRDSLKDQGIILEDTPQGT 461
Query: 418 IWR 420
W+
Sbjct: 462 RWK 464
>gi|417548036|ref|ZP_12199117.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417566287|ref|ZP_12217161.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395558043|gb|EJG24044.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400388335|gb|EJP51407.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 477
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/428 (39%), Positives = 246/428 (57%), Gaps = 37/428 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +A D E+ L++R+ Q D L CL P +P+ +D ++ I+ +I +I
Sbjct: 75 KIIHKAQDNHESIGELTDRFIQAMHEDFQTLGCLSPDAEPKATDSIQDIQRIIQTLIEKK 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY + GD++F++E P+YGRLSG++L + +AG +RV++++ K +P DF LWKA+K
Sbjct: 135 YAYQIANGDIYFSIESYPDYGRLSGRKLADMQAGASQRVSLETEKHHPFDFVLWKASKPN 194
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP W SPWG GRPGWHIECSAMS +L + FDIHGGG DLIFPHHENEIAQS AA +
Sbjct: 195 EPFWQSPWGNGRPGWHIECSAMSMCHLGNHFDIHGGGGDLIFPHHENEIAQSEAATGEKY 254
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YW+H G + N EKMSKSLGNF TIR + YHP +R ++S+HYRSP+++S L
Sbjct: 255 VNYWLHTGFINVNGEKMSKSLGNFLTIRDAFKSYHPEVIRLLMMSSHYRSPIDFSDHILK 314
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ YQ + + ++ + KT E N +F+ M+DD NT
Sbjct: 315 DTQKVLSRFYQAIYHAQPFIASKDDAIKT-------ELNSNPFIQKFNQAMNDDFNTPEA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L F D LK +N + LK++ P+ K+ + +L I +L +
Sbjct: 368 LVICF-DLLKQLNIA---LKEESPE-----------KVIKNYQLLLWIGNIL------NI 406
Query: 359 LQQLKDKALKRAE------LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
Q +K LK + L+E+++ + I R AR NK ++ +DQIR L + GI L D
Sbjct: 407 FQYDPEKILKHSASEQDSPLSEQEIQEAILARNTARSNKQYALADQIRQKLLQSGILLED 466
Query: 413 MGKETIWR 420
+TIWR
Sbjct: 467 TQTQTIWR 474
>gi|291522471|emb|CBK80764.1| cysteinyl-tRNA synthetase [Coprococcus catus GD/7]
Length = 466
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/423 (38%), Positives = 237/423 (56%), Gaps = 36/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G + +S R+ +E DMAD+ T+ P+ ++ ++ + DMI ++N
Sbjct: 72 KIIKKANEEGVDASVISERFIKEAQKDMADMNVKEATHHPKATEEIDGMIDMIQTLVNKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY V+G V+F +YG+LS + +++ AG R V + K +P DF LWK K G
Sbjct: 132 HAYAVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVNGEEGKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQS AC D
Sbjct: 192 EPSWPSPWGDGRPGWHIECSVMSKKYLGEQIDIHAGGEDLIFPHHENEIAQS-EACNDKE 250
Query: 179 VS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
+ YWMHNG + NN KMSKSLGNFFT+R+I E+Y LR F++SAHYRSPLN+S +
Sbjct: 251 FAHYWMHNGFLNINNVKMSKSLGNFFTVREIAEKYDLQVLRFFMLSAHYRSPLNFSAELM 310
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHARMSDDLNTS 296
+++ + + I + L G T + + L ++ A M DD NT+
Sbjct: 311 EASRNGLERILTAID----RLRTLNLQGDTCTAEENEQMKVFDALVAKYEAAMEDDFNTA 366
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
++ F+ M+K + S +I +E+ + +LG+
Sbjct: 367 DAISAIFE-----------MVKAANIHVTETSTAAFRDQILSEIVRLCDVLGI------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
K K+ EL ++++ LI+ER AARK K+F+++D+IR +L KGI L D +
Sbjct: 409 --------KTEKKEELLDDEIQALIDERQAARKAKNFARADEIRDELLAKGIILKDTREG 460
Query: 417 TIW 419
W
Sbjct: 461 VKW 463
>gi|322833979|ref|YP_004214006.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|384259159|ref|YP_005403093.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
gi|321169180|gb|ADW74879.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|380755135|gb|AFE59526.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
Length = 463
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 235/421 (55%), Gaps = 34/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE ++L++R E D A L LPP +PR + H+ +I D++ ++I+ D
Sbjct: 73 KIIKRAAENGETFMALTDRMIAEMHADFASLNILPPDSEPRATQHIHEIIDIVQKLIDRD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPADFALWKAAKAGE 119
AYV GDV F VE P+YG LS Q L+ +AG RV V++ KRNP DF LWK +K GE
Sbjct: 133 HAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVEANVKRNPMDFVLWKMSKPGE 192
Query: 120 PSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNV 179
PSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V
Sbjct: 193 PSWTSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYV 252
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
+ WMH+G V + EKMSKSL NFFT+R + + Y ++R+FL+S HYRS LNYS L
Sbjct: 253 NTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRSQLNYSEENLKL 312
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A ++ +Y L+ + A +P R F A M DD NT
Sbjct: 313 ARTSMERLYTALRGTDAAATPAGGEAFVTR---------------FRAAMDDDFNTPEAY 357
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F D + IN + K + LS L E++++ +LGLL +
Sbjct: 358 SVLF-DMARDIN---------RLKTEDLSAANGLAA---ELRQLAGVLGLLE----QDPE 400
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q LK A + ++ LI++R AR +KD+ +D+ R L GI L D T W
Sbjct: 401 QFLKSGAQADNDDEVAEIEALIKQRNDARASKDWGMADKARDRLNEMGIVLEDGAAGTTW 460
Query: 420 R 420
R
Sbjct: 461 R 461
>gi|268591223|ref|ZP_06125444.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
gi|291313193|gb|EFE53646.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
Length = 462
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 238/429 (55%), Gaps = 51/429 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ +L+ R E D L L P +PR + H+ +I ++ +I
Sbjct: 73 KIIKRAAENNESVEALTTRMLAEMHKDFDALNILRPDSEPRATRHIGEIIELTQSLIERG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V+ PNYG LS Q LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVADVKRNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS LNY+ L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQLNYTEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTS 296
A+ +Y L+ + + P DEF AR M+DD NT
Sbjct: 313 RSALERMYTALRGTDKSAVPAGG-------------------DEFKARFIEAMNDDFNTP 353
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ F D ++ +N + K + +S + +++E+ +LGL
Sbjct: 354 EAYSVLF-DMVREVN---------RLKSEDMSAANGMAA---QLRELASVLGL------- 393
Query: 357 EVLQQLKDKALKRAELTEED-----VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
L+Q + LK TE+D + LI++R ARKNKD++++D R +LT GI L
Sbjct: 394 --LEQDPEVFLKGGAQTEDDAEVAKIEALIQQRLDARKNKDWAQADAARDELTAMGIVLE 451
Query: 412 DMGKETIWR 420
D + TIWR
Sbjct: 452 DSAQGTIWR 460
>gi|297618406|ref|YP_003703565.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297146243|gb|ADI03000.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 539
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 244/461 (52%), Gaps = 43/461 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+ + G++ ++ +Y EY D L Y PRVSDH+ I +I ++
Sbjct: 73 KIIQRSQEEGKSAAEVAGKYIDEYFRDADALGVKRADYHPRVSDHIPDIIRVIETLVEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY + GDV++ V YG+LSG+ LE AG RV VD RK +P DFALWK AK GEP+
Sbjct: 133 YAYRIGGDVYYRVRAFERYGQLSGRSLEEMLAGARVEVDERKEDPMDFALWKEAKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECS M+ YL DIHGGG DL+FPHHENEIAQS A V Y
Sbjct: 193 WESPWGPGRPGWHIECSVMAMKYLGETLDIHGGGADLVFPHHENEIAQSEAYSGRPFVRY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG +T N EKMSKSLGNFF +R+I +Y +R +L S HYRSPL++ +L+ A
Sbjct: 253 WLHNGFITVNKEKMSKSLGNFFILREILSQYPAEVVRFYLGSTHYRSPLDFDNTKLEEAG 312
Query: 242 DAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A+ + TL+ V + + +T + +++L+++F M DD NT+ +
Sbjct: 313 RALARLNNTLRRLNEVVKNEEVEANDETRDADKGFVSRLHELKEKFEVAMDDDFNTAQAI 372
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRIL-------GLLPP 352
G D + IN+ L+ + + + ++ E+ R +L L G
Sbjct: 373 -GYLFDMAREINAYLDFWEGEGSSKAPAAIKEAYRVFTLLGGNILGFLSEDFEHKGHGIS 431
Query: 353 GAYSEVLQQLKDKALKRAELTE---------------EDVLQ------------------ 379
E+L ++K++AL+ L ED
Sbjct: 432 DKVIEILFEMKEEALESGSLERVERILSCLQSAGIEIEDTFSGSTWRANRPVNVSDLIEP 491
Query: 380 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ R+ AR+NKDF+ +D IR +L + G+ + D + WR
Sbjct: 492 LLSWRSEARRNKDFTTADVIRDNLKKIGVVVEDTREGARWR 532
>gi|94676564|ref|YP_588592.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123081502|sp|Q1LTX2.1|SYC_BAUCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|94219714|gb|ABF13873.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 462
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 237/422 (56%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR+A + GE+ L++R E D+ L L P +PR + H+++I + Q+I+ +
Sbjct: 73 KIIRKAANNGESCQQLTDRMIAEMHHDLDLLNILRPDKEPRATQHIKEIIQLTRQLIDKE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ GDV FA+E + NYG LS Q L + G+RV + + KRNP DF LWK +K GEP
Sbjct: 133 HAYIASNGDVMFAIESANNYGILSSQNLNQLQIGQRVKITTVKRNPMDFVLWKMSKHGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS + V+
Sbjct: 193 TWSSPWGNGRPGWHIECSAMSIKYLGKHFDIHGGGSDLIFPHHENEIAQSTCMENNPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+WMH+G VT NEKMSKSL NFFT+R + + Y +R+FLIS+HYR PLNYS L A
Sbjct: 253 FWMHSGMVTICNEKMSKSLSNFFTVRDVLKYYDAETVRYFLISSHYRKPLNYSEKSLQLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L++ + + P E I ++F M++D NT
Sbjct: 313 RTALKSLYIALRNTKKEVIP-----------SGGEYFI----EQFMMAMNNDFNTPAAHA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
FQ A +N LK K K Q + +LR + N ILGLL P +
Sbjct: 358 VLFQLA-----HEVNRLKTKNIKSAQ-GMAATLRYLAN-------ILGLLEQDPEVF--- 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ+ K L EE L+++R RK + ++D++R L GI L D + TI
Sbjct: 402 LQKQKIVTDLNIALIEE----LVKQRNNIRKKHQWVQADKVREKLAAMGIVLEDTPQGTI 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|423556914|ref|ZP_17533217.1| cysteinyl-tRNA synthetase [Bacillus cereus MC67]
gi|401194229|gb|EJR01221.1| cysteinyl-tRNA synthetase [Bacillus cereus MC67]
Length = 465
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKIFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEDLLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + AE + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKW----LAE--MEKFQVAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFSILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R AR+N+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|212637933|ref|YP_002314453.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
gi|226735044|sp|B7GJ46.1|SYC_ANOFW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212559413|gb|ACJ32468.1| Cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
Length = 465
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 239/424 (56%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR A +LGE+ +++ R+ + Y D+ L C PRV+++++ I I Q+I
Sbjct: 74 KLIRAARELGEDVPTIAERFIEAYFEDITALGCKKADVHPRVTENIDTIIQFIEQLIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV++ + +YG+LS Q ++ ++G R+ V +K +P DFALWKAAK GE
Sbjct: 134 YAYEVDGDVYYRTRRFSDYGKLSHQSVDELKSGARIEVGEKKEDPLDFALWKAAKEGEIY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I ++ P LR F++S HYR P+NYS L+SA
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFILVHDIIKQVDPQVLRFFMLSVHYRHPINYSQPLLESAR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
L+ + A + + H + N D I +LR+EF M DD NT+
Sbjct: 314 SG-------LERLKTAYANLK-HRLESSTNLTTNDEQWLAKIEELRNEFIREMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ + F+ A N+ + QQ+ ++ + +++ +LGL
Sbjct: 366 NGIAVLFELA-----KQANVYLMENHTSQQV-----IQAFLQQFEQLFDVLGL------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L++ EL +E++ LI++R ARKN+DF+ +D+IR +L K I L D +
Sbjct: 409 ---------SLQQDELLDEEIEALIQQRIEARKNRDFALADRIRDELKAKNIILEDTPQG 459
Query: 417 TIWR 420
T WR
Sbjct: 460 TRWR 463
>gi|338999452|ref|ZP_08638095.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
gi|338763601|gb|EGP18590.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
Length = 463
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/424 (41%), Positives = 231/424 (54%), Gaps = 43/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA + GE+ +L+ R Q D A L LPP+++PR + H+ I MI +I D
Sbjct: 72 KILKRAEENGESISALTERMIQAMHEDEARLSVLPPSHEPRATGHIGDIVAMIQTLIEKD 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K +YG+L+ ++L++ R+G RV VD K +P DF LWKAAK GE
Sbjct: 132 FAYAAANGDVYYRVRKFADYGKLNNRQLDDMRSGARVEVDVHKEDPLDFVLWKAAKPGEA 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA + V+
Sbjct: 192 HWHSPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQSEAATGKTYVN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V N EKMSKSLGNFFTIR + + P +R L+++HYRSP+NYSV L A
Sbjct: 252 TWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLVASHYRSPINYSVDSLHEA 311
Query: 241 SDAVFYIYQTLQDCEV-ALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
++ Y L+ EV + E G R A M DD N+ L
Sbjct: 312 RKSLTRFYTALEGVEVLSGGGGDETGYAERFTTA---------------MDDDFNSPEAL 356
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F + LN K ES K ++ E+ R+ G+L +L
Sbjct: 357 AVLFD-----LARDLNRAKS-----------ESSEKAQHLASELTRLAGVLG------LL 394
Query: 360 QQLKDKALK----RAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
QQ LK + L+E ++ I +R A+ NKDF+++D IR +L GI L D +
Sbjct: 395 QQNPQTFLKGNQQQVALSEAEIEAKIAQRKEAKANKDFAQADAIRDELASMGIILKDSRE 454
Query: 416 ETIW 419
T W
Sbjct: 455 GTTW 458
>gi|229015492|ref|ZP_04172490.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
gi|229021701|ref|ZP_04178283.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228739569|gb|EEL89983.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228745779|gb|EEL95783.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
Length = 420
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/425 (39%), Positives = 237/425 (55%), Gaps = 41/425 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQVAFEEAMDDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A Q L E K+ GAY +
Sbjct: 323 ITELYNVA---------------NHANQYLLEEHTSKV--------------VIGAYVKQ 353
Query: 359 LQQLKD---KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
L+ L D L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D +
Sbjct: 354 LETLFDILGLELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQ 413
Query: 416 ETIWR 420
T W+
Sbjct: 414 GTRWK 418
>gi|163816509|ref|ZP_02207873.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
gi|158448209|gb|EDP25204.1| cysteine--tRNA ligase [Coprococcus eutactus ATCC 27759]
Length = 463
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 239/422 (56%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN G + +S RY E DMA L T P+ ++ + + +M+ +I D
Sbjct: 72 KIIKRANAEGVDASVISERYIAEVKKDMAALNVREATTHPKATEEIPDMIEMVKTLIEKD 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY V G V+F K +YG+LS + +++ R+G R V+ K +P DF LWK K G
Sbjct: 132 YAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSGIDEKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWH+ECS MS Y+ DIH GG DLIFPHHENEIAQS AA
Sbjct: 192 EPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLIFPHHENEIAQSEAANGTEF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YWMHNG + NNEKMSKSLGNFFT+R+I E+Y +R F++SAHYRSPLN+S ++
Sbjct: 252 ARYWMHNGFLKINNEKMSKSLGNFFTVREIAEKYPLQVIRFFMLSAHYRSPLNFSAELVE 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
++ + + I + + +G ++ + D ++ ++ M DDLNT+
Sbjct: 312 ASKNGLERILTAVDRLKSI------NGIDGDVDKSVADEMDAFVKKYEDAMDDDLNTADA 365
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ +K+ N +N+ ++ +L L N ++++ ILG++
Sbjct: 366 ISVIFE-LVKYAN--VNVTEESSKATVELVL--------NTIEKLCDILGIITE------ 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K+ E+ + D+ LIEER AARK K+F+++D+IR L+ GI L D +
Sbjct: 409 ---------KKEEILDSDIEALIEERQAARKAKNFARADEIRDQLSSMGIILEDTREGVK 459
Query: 419 WR 420
W+
Sbjct: 460 WK 461
>gi|85058683|ref|YP_454385.1| cysteinyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
gi|109894945|sp|Q2NV45.1|SYC_SODGM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|84779203|dbj|BAE73980.1| cysteinyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
Length = 457
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/426 (42%), Positives = 233/426 (54%), Gaps = 46/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE L+ R E D L L P +PR + +++ I +++ Q+I+ D
Sbjct: 73 KIIRRAAENGETFHQLTERMISEMHSDFDQLNILRPDQEPRATHYIDAIIELVGQLIDRD 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV FAV+ +YG LS Q LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVAANGDVMFAVDSDSDYGLLSRQDLEQLQAGARVEVADVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DLIFPHHENEIAQS A V+
Sbjct: 193 SWPSPWGDGRPGWHIECSAMNGRQLGHHFDIHGGGSDLIFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V + EKMSKSLGNFFT+R + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 VWMHAGMVMVDREKMSKSLGNFFTVRDVLRYYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G A PA D +F A M DD NT +
Sbjct: 313 RSALERLYIALR------------GTDATAVPAGGD---HFVAQFIAAMDDDFNTPKAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F I +N LK +QP Q ++ +LR++ +LGLL P A+
Sbjct: 358 VLFD-----IAREVNRLKSEQPAAQGMA--ATLRQLAG-------VLGLLEQEPAAF--- 400
Query: 359 LQQLKDKALKRAELTEEDVL--QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
LQQ E++V+ LI++R ARK + ++ +D+ R LT GI L D +
Sbjct: 401 LQQ---------GAAEDNVMIEALIQQRNDARKARQWALADEARDKLTALGIVLEDGPQG 451
Query: 417 TIWRPC 422
T WR C
Sbjct: 452 TTWRRC 457
>gi|421566414|ref|ZP_16012164.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
gi|402340327|gb|EJU75529.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
Length = 473
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 237/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K + L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDVHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++SD IR L
Sbjct: 402 -IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAESDHIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|404379151|ref|ZP_10984218.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
gi|294483496|gb|EFG31181.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
Length = 475
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/435 (39%), Positives = 233/435 (53%), Gaps = 52/435 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN GE L+ R+ Q D L L P +P+ ++H+ Q+ MI ++I N
Sbjct: 73 KIIARANQNGETIQQLTERFIQAMNEDSQALGVLRPDIEPKATEHIAQMIQMIEKLIENG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY E GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAK EP
Sbjct: 133 KAYPAENGDVYYAVREFDAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKPEEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA----CQ- 175
SW SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQSC A C
Sbjct: 193 SWASPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQSCGANGGLCGH 252
Query: 176 -----------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
DS+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y P +R F++ A
Sbjct: 253 NKPVSGSLKKIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A +++ +Y TL + + +G N +
Sbjct: 313 HYRSPLNYSDAHLDDAKNSLTRLYNTLNNVKPIEFKLDSNGNN-----------NDYTHK 361
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F M+DD T+ ++ F+ + + K L L+ +
Sbjct: 362 FFNAMNDDFGTAEAVSVLFE------------IANEANKNDSAELSGCLKTLGG------ 403
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
+LGLL +Q L+ +++ +LI +R AR+ K++++SD+IR L
Sbjct: 404 -VLGLLQDNP-----EQFLQGGNNVDGLSADEINKLISQRKIARETKNWAESDRIRDILA 457
Query: 405 RKGIALMDMGKETIW 419
I + D T W
Sbjct: 458 EHKIQVKDSADGTTW 472
>gi|340363807|ref|ZP_08686122.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
gi|339884918|gb|EGQ74673.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
Length = 473
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 237/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K + L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDVHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E++ LI +R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIEDLIAQRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|148358849|ref|YP_001250056.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
gi|187629845|sp|A5IBG0.1|SYC_LEGPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148280622|gb|ABQ54710.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
Length = 456
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 172/425 (40%), Positives = 238/425 (56%), Gaps = 51/425 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ + L+ +Y D L LPP ++PR + H+E I +I +++
Sbjct: 73 KIIARASERDVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV + V+ P YG+LS + +E +G RV + KR+P DF LWK AK GEP
Sbjct: 133 SAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ H L +FDIHGGG+DL FPHHENEIAQS AA +
Sbjct: 193 SWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKPFAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + N EKM+KS+GNF+TI + + +HP +R+FL+S+HYRSPLNYS L +A
Sbjct: 253 YWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRYFLLSSHYRSPLNYSEENLLNA 312
Query: 241 SDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ +YQ ++D + A S E+ +++F+ M+DD NT
Sbjct: 313 KKALIRLYQAVKDVPPQTADSKLDEY----------------WQEQFNQAMNDDFNTPVA 356
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L+ FQ L + K +L +L+ + ILG L
Sbjct: 357 LSVLFQ------------LAHEVNKSNSPALAHTLKNLAG-------ILGFL-------- 389
Query: 359 LQQLKDKALKRAELTEEDVL---QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
Q ++ ++ L EE+ L QLI ER AR ++++K+DQIR DL KGI L D
Sbjct: 390 --QKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRTDLLSKGIELEDGAT 447
Query: 416 ETIWR 420
T WR
Sbjct: 448 GTTWR 452
>gi|238019166|ref|ZP_04599592.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
gi|237863865|gb|EEP65155.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
Length = 497
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/427 (39%), Positives = 244/427 (57%), Gaps = 31/427 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G + +++NRY Y M L PRVS H+E I MI+ +I
Sbjct: 90 KIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDIIAMISTLIEKG 149
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD RK+NP DFALWKAAK GEP
Sbjct: 150 YAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPY 209
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS C+ Q +V
Sbjct: 210 WESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSG-QHPSV 268
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 269 RYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEE 328
Query: 240 ASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDL 293
A+ ++ + L+ CE +H + A E +EF A MSDD
Sbjct: 329 ANKSLERLSTAIENLLYLEKCEPGPCDEAQH----LLEKAKE-----YEEEFEAAMSDDF 379
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPG 353
NT+ + F A +N+ + ++ + E++ +++ K + ++G+L
Sbjct: 380 NTALATSSMFGLA-----KEINIYYQTVTGREGVVCQEAIAEVKRIFKFMTEVIGILE-- 432
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
+ + A EE + ++ R A R K ++ +D IR L GI + D
Sbjct: 433 ------KAWEGNTGANAAEYEELMQVILSVRQACRDQKQWALADCIRDRLAEIGITIEDS 486
Query: 414 GKETIWR 420
+ W+
Sbjct: 487 PQGARWK 493
>gi|421539054|ref|ZP_15985225.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
gi|402315166|gb|EJU50732.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
Length = 473
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 238/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K + L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDVHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|313887550|ref|ZP_07821233.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846428|gb|EFR33806.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 465
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 240/423 (56%), Gaps = 35/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP-PTYQPRVSDHMEQIKDMITQIINN 60
++I +AND G ++ RY +E+ D L T PR ++H+++I D I +I+
Sbjct: 72 KMINKANDEGVKVSDIAERYIKEFKKDAGGLHLYDYETINPRATEHIDEIIDFIQTLIDK 131
Query: 61 DCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV+F + + +YG+LS + LE+ +G RV V+ K+NP DFALWK K GEP
Sbjct: 132 GAAYVSNGDVYFDISHAKDYGKLSKKNLEDLISGHRVDVNDNKKNPQDFALWKNKKEGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W +PWG GRPGWHIECS M+ + DIH GG DL FPHHENEIAQS +
Sbjct: 192 YWQAPWGEGRPGWHIECSVMAKTIIGDNIDIHTGGEDLQFPHHENEIAQSETCNGVPFAN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG +T +NEKMSKS GNFFT+R+I+E + LR FL++ YRSP+N+S ++
Sbjct: 252 YWLHNGMITVDNEKMSKSKGNFFTVREISEEFDLEVLRFFLLTTQYRSPINFSREVMEQT 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI---NKLRDEFHARMSDDLNTSH 297
++ +Y E A+ E ++ E+ + +K ++F M DDLNT+
Sbjct: 312 KNSSKRLYNAKYKLEDAI----EKTSVEKMTEEEENLLKGYDKHIEKFEKAMEDDLNTAD 367
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+T F D +K IN +L+ K+ ++ L L++ L K +LG++
Sbjct: 368 AITAIF-DLVKDINLNLDENSSKEVLEKSLELLKKLTK----------VLGIMEE----- 411
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+R E++ D+ +LI+ER ARKNKDF+++D+IR +L GI + D T
Sbjct: 412 ----------EREEIS-GDIEELIKERNEARKNKDFTRADEIRDELKNMGIEIEDTRSGT 460
Query: 418 IWR 420
W+
Sbjct: 461 TWK 463
>gi|149191898|ref|ZP_01870131.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148834246|gb|EDL51250.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 460
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 241/423 (56%), Gaps = 41/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++ + +I +++ ++I+
Sbjct: 73 KIIKRANENGESCESLTERLIGEMHADFDALNMKRPDVEPRATEFIAEIIELVEKLIDRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V K YG+LS Q L+ +AG RV V+S KR+P DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEVSKFDKYGKLSKQDLDQLQAGARVDVESAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + + Y P +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLDHYDPETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ ++ P E+ + + F A M+DD NT +
Sbjct: 313 RSALERLYTSLRGLDLDAEP-----------TGGEEYVTR----FTAAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQ-QQLSLIESLRKIENEVKEVLRILGLL--PPGAYSE 357
F A +N LK Q QL + ++E+ ++G+L P A+
Sbjct: 358 VLFDMA-----REINRLKTVDLGQASQLGAL---------MRELADVIGILHQDPEAF-- 401
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
LK A E+ E + LI+ R +R +KD++ +D R LT GI L D + T
Sbjct: 402 ----LKGDAGDNDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGT 455
Query: 418 IWR 420
WR
Sbjct: 456 TWR 458
>gi|411008777|ref|ZP_11385106.1| cysteinyl-tRNA ligase [Aeromonas aquariorum AAK1]
Length = 458
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 237/422 (56%), Gaps = 41/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G L+ R + D L + P +PR + H+ +I +++ +++ +
Sbjct: 73 KIIKRAAETGVTCDDLTERLIGDMHADFDALGMVRPDVEPRATQHIGEIIELVQSLLDKE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D A + G ++ D F M DD NT +
Sbjct: 313 RAALERMYTALRDLPAAAAA----GGDEQV------------DRFKEAMDDDFNTPEAYS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K + +++ L ++E+ +LG +LQ
Sbjct: 357 ALF-DLVREIN---------RQKGEDMAVAAGLGA---RLRELGAVLG---------ILQ 394
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + LK E EE ++ +LI ER AR +K+++ +D R LT GI L D +T
Sbjct: 395 QDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLEDSAGKTS 454
Query: 419 WR 420
WR
Sbjct: 455 WR 456
>gi|134045577|ref|YP_001097063.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
gi|132663202|gb|ABO34848.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
Length = 476
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 235/425 (55%), Gaps = 31/425 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G+NP LS ++ +L DMA L+ P P+V++H+ +I I ++I
Sbjct: 73 KIIKRANEKGKNPQELSEQFINVFLNDMATLKVKPADIYPKVTEHIPEIIAFIEKLIEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY E V+F V+K NYG+LS LE+ +G R+ +K+NP DFALWK AK EP
Sbjct: 133 FAYKTENGVYFEVKKFENYGKLSNINLEDLYSGVRIETSEKKKNPEDFALWKTAKPREPK 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SP+G GRPGWHIECSAMS+ YL +FDIHGGG DL FPHHENEIAQS A V+Y
Sbjct: 193 WESPFGEGRPGWHIECSAMSSKYLGKQFDIHGGGRDLSFPHHENEIAQSVAYSGKDWVNY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V N EKMSKSLGNF TI I++ Y P LR F I HYRSP++Y+ +
Sbjct: 253 WLHTGFVMVNGEKMSKSLGNFVTIEDISKEYDPEILRFFFIQRHYRSPIDYTAESMTHVK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + IY +++ ++L ++ G D + + F+ M+ D NT L
Sbjct: 313 NNLEKIYNVIENIRISLEKSKKSGAWGENEFLLYDILKNSKHNFYEAMNSDFNTVEALKS 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIES-----LRKIENEVKEVLRILGLLPPGAYS 356
F+ +++ +N + LSL+E+ L K + K V I GL Y
Sbjct: 373 VFE-----VSNGVN---------KYLSLVETPSEGLLLKAFDFFKIVGEIFGLFE--NYF 416
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ + D EE + LIE R+ R K++ SD+IR L G + D KE
Sbjct: 417 KTSSESND---------EEFIKFLIELRSDLRLQKNYEMSDKIRDGLKNIGYLIEDNPKE 467
Query: 417 -TIWR 420
TI++
Sbjct: 468 GTIFK 472
>gi|319638892|ref|ZP_07993650.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
gi|317399796|gb|EFV80459.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
Length = 473
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 237/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGDLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NDYTSR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K +L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDANLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|150015023|ref|YP_001307277.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
gi|187629800|sp|A6LPP1.1|SYC_CLOB8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|149901488|gb|ABR32321.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 466
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 239/422 (56%), Gaps = 33/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I +AND G L ++Y +EY D L+ T PR ++++ I + ++I
Sbjct: 72 KMINKANDEGITVKELGDKYIKEYYQDADSLKIERATVNPRATEYIHDIIKFVEELIEAG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+++ +K NYGRL GQ L++ + G R++VD RK++P DFA+WKA K GEP+
Sbjct: 132 FAYEVDGDVYYSTKKFDNYGRLVGQNLDDLQVGARISVDERKKDPMDFAVWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECS M+ L DIH GG+DL FPHHENEIAQS A + +Y
Sbjct: 192 WESPWGPGRPGWHIECSCMAKKLLGDTIDIHAGGMDLRFPHHENEIAQSEALTGKTFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H V +N+KMSKSL NFFT R++ E Y A+R ++S HYR +N++ LDSA
Sbjct: 252 WLHAAFVNVDNKKMSKSLNNFFTAREVLEEYSSDAIRFLMLSGHYRIQINFTKELLDSAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE---DCINKLRDEFHARMSDDLNTSHI 298
++ + L +C L ++ ++ A E ++K R++F +M DD NT+
Sbjct: 312 SSI----ERLYNCINNLENLKDEVTKKLMDEAEEKYLKSLDKYREKFIEKMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F ++ K S E K E+ V+E+ LG +
Sbjct: 368 ISVLF-----------DLTKDINNNVNINSSSELCEKAESMVRELGNPLG---------I 407
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ +K L E ++ +LIE+R ARKNKDF+ +D+IR DL + I L D +
Sbjct: 408 LQDRIEKDL------ETEIQELIEKRQQARKNKDFALADKIRDDLKSRNIILEDTPQGVR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|416999202|ref|ZP_11939871.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
gi|333977355|gb|EGL78214.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
Length = 482
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/427 (39%), Positives = 244/427 (57%), Gaps = 31/427 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G + +++NRY Y M L PRVS H+E I MI+ +I
Sbjct: 75 KIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDIIAMISTLIEKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD RK+NP DFALWKAAK GEP
Sbjct: 135 YAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPY 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS C+ Q +V
Sbjct: 195 WESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSG-QHPSV 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 254 RYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEE 313
Query: 240 ASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDL 293
A+ ++ + L+ CE +H + A E +EF A MSDD
Sbjct: 314 ANKSLERLSTAIENLLYLEKCEPGPCDEAQH----LLEKAKE-----YEEEFEAAMSDDF 364
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPG 353
NT+ + F A +N+ + ++ + E++ +++ K + ++G+L
Sbjct: 365 NTALATSSMFGLA-----KEINIYYQTVTGREGVVCQEAIAEVKRIFKFMTEVIGILE-- 417
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
+ + A EE + ++ R A R K ++ +D IR L GI + D
Sbjct: 418 ------KAWEGNTGANAAEYEELMQVILSVRQACRDQKQWALADCIRDRLAEIGITIEDS 471
Query: 414 GKETIWR 420
+ W+
Sbjct: 472 PQGARWK 478
>gi|169344133|ref|ZP_02865116.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|169297744|gb|EDS79843.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
Length = 466
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 238/419 (56%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G + + Y +EY D L T PR ++ + +I + +++
Sbjct: 73 KMIKKANEEGTTVKKIGDTYIKEYYQDADALNIERATVNPRATEFIGEIIKFVKGLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+ +K YG+LSGQ +E+ ++G R++VD RK++P DFA+WKA K GEP+
Sbjct: 133 YAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDERKKDPMDFAIWKAQKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS A + Y
Sbjct: 193 WNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPHHENEIAQSEALTGEPFARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NNEKMSKSL NFFT R+I ERY +R ++SAHYR LN+S L+SA
Sbjct: 253 WLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVIRFLMLSAHYRQQLNFSEDLLESAK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+V IY + + E + A + +N+ ++++ +M DD NT+ +T
Sbjct: 313 ASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLESLNQYKEKYIEKMDDDFNTADAITA 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K N+++ + K+ Q+ L LI R LG P G + +
Sbjct: 372 IF-DLIKDTNTNITIDSSKELAQKALELI--------------RELG-APLGMFQKS--- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ L EE + LI +R ARK++DF+ +D+IR +L +GI L D + W+
Sbjct: 413 ------TKGNLAEE-IEALIAKRQQARKDRDFALADKIRDELKDRGIILEDTPQGVRWK 464
>gi|423614620|ref|ZP_17590477.1| cysteinyl-tRNA synthetase [Bacillus cereus VD107]
gi|401237464|gb|EJR43916.1| cysteinyl-tRNA synthetase [Bacillus cereus VD107]
Length = 465
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 242/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++ DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDILDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQVAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLEILFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|407692004|ref|YP_006816793.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388061|gb|AFU18554.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 459
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 236/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D DL L P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS LNYS+ LD A
Sbjct: 253 YWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSLLNYSLDNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C++++ E + + F A M DD NT L
Sbjct: 313 RSALERLYTSLRGCDLSVEAV-----------GGEQYV----EAFKAAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ I +N LK + + + +KE+ +LGLL P A+
Sbjct: 358 VLFE-----IAREVNKLKTED--------VAKANGLAVRLKELAGVLGLLYQDPEAF--- 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ D E+ E + LI++R A+ K+++ +D++R L I L D T
Sbjct: 402 LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|334129555|ref|ZP_08503359.1| Cysteinyl-tRNA synthetase [Methyloversatilis universalis FAM5]
gi|333445240|gb|EGK73182.1| Cysteinyl-tRNA synthetase [Methyloversatilis universalis FAM5]
Length = 459
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 174/427 (40%), Positives = 240/427 (56%), Gaps = 50/427 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE +L++R+ D L L P ++PR ++ + Q++ +I ++
Sbjct: 73 KIIRRAAENGETMRALTDRFIAAMHEDADALGVLRPDHEPRATEFVPQMQTLIQRLEAKG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV ++V K YG+LSG+ L++ RAGERV V K++P DF LWK AK EP
Sbjct: 133 LAYRAASGDVNYSVRKFDGYGKLSGKSLDDLRAGERVDVIDDKQDPLDFVLWKHAKPAEP 192
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ W SPWG GRPGWHIECSAMS+ L +FDIHGGG DL FPHHENEIAQS A +
Sbjct: 193 AEAKWASPWGDGRPGWHIECSAMSSQLLGDRFDIHGGGADLQFPHHENEIAQSEGAHGHT 252
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V ++EKMSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS L
Sbjct: 253 FVNYWMHNGFVRVDDEKMSKSLGNFFTIREVLQKYDPEVVRFFILRAHYRSPLNYSDAHL 312
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHARMSDDLNT 295
D A A+ +Y TL++ + PAA D F A M DD NT
Sbjct: 313 DDARGALTRLYTTLKN----------------VPPAACQPDWNTPAGSRFRAAMDDDFNT 356
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPG 353
+ L F+ L + + ++ LR + +LGLL P
Sbjct: 357 AEALAVLFE------------LSNEANRGNDAAVAGELRALAG-------VLGLLERSPE 397
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
+ LK +A + L + + LI +R AA+K +DF+ +D++R +L ++GI L D
Sbjct: 398 DF------LKGRA-QAGGLDDAQIEALIAQRVAAKKARDFATADRVRDELKQQGIILEDS 450
Query: 414 GKETIWR 420
T WR
Sbjct: 451 AAGTTWR 457
>gi|296313701|ref|ZP_06863642.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
gi|296839719|gb|EFH23657.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
Length = 475
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 236/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 75 KIIARAAENGETIGELTARFIQAMHEDANALGVLRPDIEPKATENIPQMIAMIETLIQNS 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 135 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + L FDIHGGG DL FPHHENEIAQS A
Sbjct: 195 AWESPWGNGRPGWHIECSAMSENLLGDTFDIHGGGADLQFPHHENEIAQSVGASGHSCGH 254
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 255 NHAQTHYGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 314
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 315 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NGYTRR 361
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 362 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 403
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A+ L+ E++ LI R AR +K++ +SD+IR L
Sbjct: 404 -IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWVESDRIRDLLN 457
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 458 EHKIILEDNAGGTTWR 473
>gi|373468293|ref|ZP_09559550.1| cysteine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371766384|gb|EHO54639.1| cysteine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 469
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/426 (39%), Positives = 244/426 (57%), Gaps = 37/426 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +A + G + +S RY E DMA + LP T P + + ++DMI ++I +
Sbjct: 72 KIINKAIEEGVDAAVISQRYIDECKKDMAAMNVLPATKNPLATQEIGGMEDMIGELIESG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKA 117
AYV +G V+F V+ +YG+LS + ++ ++G R V + K + DF LWK K
Sbjct: 132 HAYVAKDGTVYFRVKSFKDYGKLSHKNIDELQSGFREIKVTGEDGKEDSNDFVLWKPKKD 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP WDSPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENEIAQS +A S
Sbjct: 192 GEPFWDSPWSKGRPGWHIECSVMSKKYLGDQIDIHGGGEDLIFPHHENEIAQSESASGKS 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
+YWMHN + +N+KMSKS GNFFT+R I+E+Y LR F++SAHYRSPLN+S +
Sbjct: 252 FANYWMHNAFLNIDNKKMSKSAGNFFTVRDISEKYDLQVLRFFMLSAHYRSPLNFSADLM 311
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA---EDCINKLRDEFHARMSDDLN 294
++A +++ I + + + A+ + A I+ A + L+D+F A M DD N
Sbjct: 312 EAAKNSLERILTGVDNIKSAI----QRDNKAPISDAELSNLEIAKVLKDKFVAAMDDDFN 367
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T+ ++ F+ +K N++LN + + L +IE L +LG++
Sbjct: 368 TADAISAIFE-LIKLSNTTLNETSTAEYAKGLLKVIEPL----------CDVLGIITE-- 414
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
++AE+ + ++ LIE+R ARKNKDF+ +D+IR DL KGI L D
Sbjct: 415 -------------RKAEILDSEIEDLIEQRTQARKNKDFALADKIRNDLLEKGIVLEDTR 461
Query: 415 KETIWR 420
+ W+
Sbjct: 462 EGVKWK 467
>gi|385858044|ref|YP_005904556.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
gi|325208933|gb|ADZ04385.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
Length = 473
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ +N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN-------------VNDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|423393457|ref|ZP_17370683.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
gi|423421744|ref|ZP_17398833.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|401096863|gb|EJQ04900.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|401629564|gb|EJS47377.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
Length = 465
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 166/425 (39%), Positives = 237/425 (55%), Gaps = 41/425 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N + K + F M DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEMEKFQVAFEEAMDDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A Q L E K+ GAY +
Sbjct: 368 ITELYNVA---------------NHANQYLLEEHTSKV--------------VIGAYVKQ 398
Query: 359 LQQLKD---KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
L+ L D L + EL +E++ LI++R ARKN+DF+ SDQIR DL + I L D +
Sbjct: 399 LETLFDILGLELAQEELLDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQ 458
Query: 416 ETIWR 420
T W+
Sbjct: 459 GTRWK 463
>gi|149376716|ref|ZP_01894474.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
gi|149358955|gb|EDM47421.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
Length = 436
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 245/423 (57%), Gaps = 41/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+RRA++ GE L+ R + D A L L PT +P +D++ I MI ++++
Sbjct: 49 KILRRADENGEVYSDLTQRMIKAMHEDEAKLGVLSPTEEPCATDYINDIVAMIHKLVSGG 108
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV+F+VE +YG+LS ++LE+ AG RV V KR+PADF LWKAAK GE
Sbjct: 109 HAYAADNGDVYFSVESYSDYGKLSKKKLEDLVAGARVDVQEAKRSPADFVLWKAAKEGEV 168
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQS A + V+
Sbjct: 169 SWPSPWGDGRPGWHIECSAMSNRCLGETFDIHGGGPDLLFPHHENEIAQSECANGHTFVN 228
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSLGNFFTIR+I E+Y P +R+FL+S+HYRS ++YS L A
Sbjct: 229 TWMHAGAIRVNKEKMSKSLGNFFTIREIFEKYAPEVVRYFLVSSHYRSQVDYSEDNLAEA 288
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y L+ L P + +T AE M DD NT+
Sbjct: 289 GRTLTRLYHALR----GLVPAKNVAETEHDQRFAE------------AMDDDFNTA---- 328
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
GA L + + +N+ +++ + K + ++R+ G+L +LQ
Sbjct: 329 GATA-VLHAVANEINLHRREGRDE----------KANEQAAVLVRLGGVLG------LLQ 371
Query: 361 QLKD---KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q + +A EL+ +D+ +I+ RA ARK KDF+++D+IR +L KG+ L D + T
Sbjct: 372 QDPEAFFQADTGGELSADDIAAMIQARADARKQKDFAEADRIRDELADKGVILDDSREGT 431
Query: 418 IWR 420
WR
Sbjct: 432 SWR 434
>gi|358066738|ref|ZP_09153228.1| cysteinyl-tRNA synthetase [Johnsonella ignava ATCC 51276]
gi|356695009|gb|EHI56660.1| cysteinyl-tRNA synthetase [Johnsonella ignava ATCC 51276]
Length = 469
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/427 (39%), Positives = 245/427 (57%), Gaps = 35/427 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G + +S RY E DMAD+ +P T P + ++ ++DMI +I
Sbjct: 72 KIINRAKEEGVESIVISTRYIAECKKDMADMNIMPATKHPLATQEIDGMEDMIKTLIEKK 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKA 117
AYV +G V+F VE +YGRLS + ++ ++G R V + K++PADF LWK K
Sbjct: 132 HAYVAKDGTVYFDVESFKDYGRLSNKNIDELQSGFRELQVTGEESKKSPADFVLWKPKKE 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP WDSPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENEIAQS ++
Sbjct: 192 GEPYWDSPWSKGRPGWHIECSVMSRKYLGVQIDIHGGGEDLIFPHHENEIAQSESSSGMK 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
++WMHN + +N+KMSKSLGNFFT+RQI E+Y ALR F++SAHYR+PLN+S+ +
Sbjct: 252 FANFWMHNAFLNIDNKKMSKSLGNFFTVRQIGEKYDLQALRFFMLSAHYRNPLNFSMDLM 311
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDCINKLRDEFHARMSDDLNTS 296
+S+ +A+ I +++ + L Q A + D + KL+++F M DD NT+
Sbjct: 312 ESSKNALDRIITSVERLDEFL--LQSSRDAADDMEKQNLDRLLKLKNKFEVFMDDDFNTA 369
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
++ F+ ++ NS+ + K E + + + + +LG++
Sbjct: 370 DAISTVFE-IVRLANSTADENSSK----------EYINALHEAIDTLCNVLGIIT----- 413
Query: 357 EVLQQLKDKALKRAELT-EEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
KR +L+ +E+V LIE+R ARKNKD+ ++D+IR L GI L D +
Sbjct: 414 -----------KRKQLSIDEEVEALIEKRQEARKNKDYKQADEIRNRLLSMGIVLEDTRE 462
Query: 416 ETIWRPC 422
W+
Sbjct: 463 GVKWKKA 469
>gi|385331930|ref|YP_005885881.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
gi|311695080|gb|ADP97953.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
Length = 462
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 247/423 (58%), Gaps = 39/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+RRA++ GE L++R + D A L L P +PR + ++++I MI ++I
Sbjct: 73 KILRRADENGEPYDELTDRMIKAMHEDEARLGVLSPDEEPRATAYIDEIIAMIHKLIAGG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV+FAV+ +YG+LS ++LE+ AG RV V KR+PADFALWKAAKAGE
Sbjct: 133 HAYAADNGDVYFAVDSFDDYGKLSKKKLEDLLAGARVDVQEAKRSPADFALWKAAKAGEV 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQS A + V+
Sbjct: 193 SWPSPWGDGRPGWHIECSAMSTCCLGETFDIHGGGPDLLFPHHENEIAQSECATGHTFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS ++YS L A
Sbjct: 253 TWMHAGAIRVNKEKMSKSLGNFFTIREIMEKYPAEVVRYFLVSSHYRSQVDYSEENLAEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y L+ + P K A + + D + F M DD NT+
Sbjct: 313 GRTLTRLYHALR----GIVP----AKAADVPESEHD------ERFAEAMDDDFNTA---- 354
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
A+ +++ N + + + + E++ K+ IL L G +LQ
Sbjct: 355 ----GAIAVLHAVANEINQHRRDGR-----------EDDAKQSAAILVRL--GGVLGLLQ 397
Query: 361 QLKD---KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q + +A EL+ ED+ +I+ RA ARK K+F+++D+IR +L KGI L D + T
Sbjct: 398 QDPEAFFQADTGGELSAEDIEAMIQARADARKAKNFAEADRIRDELLEKGIILDDSREGT 457
Query: 418 IWR 420
WR
Sbjct: 458 TWR 460
>gi|153952840|ref|YP_001393605.1| cysteinyl-tRNA synthetase [Clostridium kluyveri DSM 555]
gi|219853505|ref|YP_002470627.1| hypothetical protein CKR_0162 [Clostridium kluyveri NBRC 12016]
gi|187629803|sp|A5N4M6.1|SYC_CLOK5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765185|sp|B9DY88.1|SYC_CLOK1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146345721|gb|EDK32257.1| CysS [Clostridium kluyveri DSM 555]
gi|219567229|dbj|BAH05213.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 465
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 161/419 (38%), Positives = 238/419 (56%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AND L +R+ EY D L T PR + ++ +I + I +I+
Sbjct: 72 KMIKKANDENITVQQLGDRFIDEYYRDADALNIKRATVNPRATLYISKIIEFIQDLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F +K NYG+LSGQ +E ++G R+ +D RK+NP DFA+WK+ K GEPS
Sbjct: 132 YAYSVDGDVYFNAKKFNNYGKLSGQNIEQLQSGARIDIDERKKNPMDFAVWKSEKKGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAYNILGETIDIHAGGSDLKFPHHENEIAQSEGRTGKVFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+ V NN+KMSKSL NFFT R+I ++Y P +R F++S HYR+P+N+S+ LDS
Sbjct: 252 WMHSAFVNINNQKMSKSLNNFFTTREILDKYEPDVIRLFMLSGHYRTPINFSIELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ I ++ + E S + G ++ +N + + +M DD NT+ ++
Sbjct: 312 SALDRICNSIINLEELSSKVKNDG-ILDSEIKYKEHLNSYKQRYIEKMDDDFNTADAISV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D ++ IN++++ + + L+LI L G+ +LQ+
Sbjct: 371 IF-DLIRDINTNIDENSSMEIIKYSLALIREL-------------------GSPLGILQK 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
K ++ E +V LIE+R ARK+K+++ +D+IR DL KGI L D W+
Sbjct: 411 SKRGSI------ETEVELLIEKRQKARKDKNWALADKIRDDLKDKGIILEDTSDGVRWK 463
>gi|108764055|ref|YP_630849.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
gi|108467935|gb|ABF93120.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
Length = 504
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 246/421 (58%), Gaps = 16/421 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A + GE P+ L+ RY + + D L L P + PRVSDH+ +I +I ++++
Sbjct: 92 KIIKAAAETGEAPVELAARYVEIFREDTRALHLLEPDFSPRVSDHLPEIIAIIQKLVDKG 151
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+V +Y +LS + L+ GERV +KR P DFALWKAAK GEP+
Sbjct: 152 HAYASQGDVYFSVSSDEDYAKLSKRNLDELCVGERVQPGEQKREPLDFALWKAAKPGEPA 211
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQS +A + Y
Sbjct: 212 WESPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQSESANGVTFARY 271
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + KMSKSLGN +R + P ALR F ++ HYR PL++S L A
Sbjct: 272 WMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLATHYRHPLSFSDKALADAE 331
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ Y Y+TL+ + +S GK P D + EF + M DD NT+ L
Sbjct: 332 TRMEYFYETLRKVDERIS-----GKDFGKGPLHGDP-QRFFTEFESAMDDDFNTAGGL-- 383
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVL 359
+L + +N L K P + + + +L + +V+ V +LGL P A+ L
Sbjct: 384 ---GSLSGLFGMMNELTDKPPVKDKALVGRTLHALREDVRRVSSVLGLFEDAPDAW---L 437
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ +++A++ + +V +L+ ER AAR KDF+ +D++R++L KG+ +MD T W
Sbjct: 438 LRRRERAVRERGIDVAEVERLLGERTAARAAKDFAAADRVRSELKEKGVEIMDTPAGTTW 497
Query: 420 R 420
+
Sbjct: 498 K 498
>gi|433480605|ref|ZP_20437886.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|433514404|ref|ZP_20471186.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|433520767|ref|ZP_20477475.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|433541958|ref|ZP_20498396.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
gi|432213882|gb|ELK69792.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|432245366|gb|ELL00836.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|432251383|gb|ELL06752.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|432275029|gb|ELL30107.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
Length = 473
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ +N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN-------------VNDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|165976334|ref|YP_001651927.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|307261399|ref|ZP_07543074.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|229558613|sp|B0BPJ8.1|SYC_ACTPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|165876435|gb|ABY69483.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|306869130|gb|EFN00932.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 459
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 238/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D DL L P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS LNYS+ LD A
Sbjct: 253 YWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSLLNYSLNNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C++++ E + + F A M DD NT L
Sbjct: 313 RSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSE 357
F+ I +N LK + K L++ +KE+ +LGLL P A+
Sbjct: 358 VLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLGLLYQDPEAF-- 401
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
LQ D E+ E + LI++R A+ K+++ +D++R L I L D T
Sbjct: 402 -LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|379012779|ref|YP_005270591.1| cysteinyl-tRNA synthetase [Acetobacterium woodii DSM 1030]
gi|375303568|gb|AFA49702.1| cysteinyl-tRNA synthetase CysS [Acetobacterium woodii DSM 1030]
Length = 465
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 246/424 (58%), Gaps = 33/424 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+++ +P +++ +Y QEY D L + P+VS+++ +I +MI +
Sbjct: 72 KIINRSHEENISPEAVAEKYIQEYFADADALGIKRASVHPKVSENITEIIEMIKTLEAKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V G+V++ VE +YG+LS Q +++ R+G R+ V+ K +P DFALWK K GEP
Sbjct: 132 LAYNVSGNVYYRVEAFKDYGKLSKQSIDDLRSGARIEVNDEKHSPLDFALWKKKKDGEPY 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAMS +L + DIHGGG DLIFPHHENEIAQS +C + +Y
Sbjct: 192 WPSPWGDGRPGWHIECSAMSKKHLGATIDIHGGGQDLIFPHHENEIAQSEGSCGKTFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +N+KMSKS GNFFT+R I +++ +R FL+ AHYRSP+N+S + L A+
Sbjct: 252 WVHNGYINIDNQKMSKSKGNFFTVRDIAKKFDLEVVRMFLLMAHYRSPVNFSEVLLQQAA 311
Query: 242 DAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A+ +Y E L +P + +T + +++ + +F A M DD+NT+ +
Sbjct: 312 TALERLYTAKFQMEFLLEKAPLEAATET---EMTWMNTLDQYKHDFIAAMDDDINTADAI 368
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ ++ +NS+L+ K ++ +N E+ +LGL
Sbjct: 369 AVIFE-LVRDLNSNLDANSTKA----------AIMAGQNIFSELTTVLGL---------- 407
Query: 360 QQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
A+K E +D ++ LI +R AARK KDF ++D IR +L KGI L D +
Sbjct: 408 ------AVKAKETNLDDAVEDLIAQRQAARKAKDFKRADAIRDELLAKGIVLEDTREGVK 461
Query: 419 WRPC 422
W+
Sbjct: 462 WKKA 465
>gi|218767348|ref|YP_002341860.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
gi|34222758|sp|Q9JWJ3.1|SYC_NEIMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121051356|emb|CAM07647.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
Length = 699
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 299 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 358
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 359 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 418
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 419 AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 478
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 479 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 538
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ +N
Sbjct: 539 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN-------------VNDYTRR 585
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 586 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 627
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 628 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 681
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 682 EHKIILEDNAGGTTWR 697
>gi|303249127|ref|ZP_07335367.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302489452|gb|EFL49399.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 485
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 176/419 (42%), Positives = 230/419 (54%), Gaps = 9/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++A G ++ RY + DM L L +PR ++++ + DM ++I
Sbjct: 72 KIIKKAASEGATCAGIAERYIAAFYEDMDKLGILRADAEPRATEYVAAMADMAERLIETG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V +YG+LSG+ +E+ RAG RVA K +P DFALWKA+K GEP
Sbjct: 132 HAYRTPSGDVYFRVRSFADYGKLSGRDIEDMRAGARVAPGDEKEDPLDFALWKASKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SP+GPGRPGWH+ECS MS L FDIHGGG DLIFPHHENEIAQS AA
Sbjct: 192 VWESPFGPGRPGWHLECSVMSEKLLGIPFDIHGGGQDLIFPHHENEIAQSEAATGKEFCR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+W+HNG V N EKMSKSLGNF TIR I +RY P LR FL+++HYRSPL+YS LD A
Sbjct: 252 FWVHNGFVRINTEKMSKSLGNFITIRDIYKRYLPEVLRFFLVASHYRSPLDYSDQALDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y E AL+ + G A E + + F A M DD NT+ L
Sbjct: 312 EKGIKRLYAAKGQMEQALTRAKWSGTKLPAEIAEE--LARHEQGFIAAMDDDCNTAQALG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A++ L K K + + I LR+I + + ILG+ + E L
Sbjct: 370 HVFG-AVRLAGRLLE--DKTLAKSAETADI--LRRILADFETWSGILGVCGRDS-REFLD 423
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
LK R + V L+ ER ARK KDF +SD IR +L G+ +MD W
Sbjct: 424 ALKACRAARLGIDPTRVDALVAERQDARKAKDFPRSDAIRDELATLGVTVMDTPTGPQW 482
>gi|317051773|ref|YP_004112889.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316946857|gb|ADU66333.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 465
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 238/419 (56%), Gaps = 28/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE +L+ R+ E+ DMA L LPPT PR ++H+ ++ +I ++++N
Sbjct: 73 KIINRARENGEEWKALAERFISEHDRDMAALYVLPPTIAPRATEHLPEMIALIEKLLDNG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY D+FF V + YG+LS + LE+ ++G RV V+ K NP DF LWK K GEPS
Sbjct: 133 YAYKGGDDIFFRVHRFTEYGKLSHKALEDLQSGSRVEVNPLKENPLDFVLWKGKKEGEPS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W++ +G GRPGWHIECSAM +L FDIHGGG DLIFPHHENEIAQS A + Y
Sbjct: 193 WEASFGAGRPGWHIECSAMGHKHLGRVFDIHGGGKDLIFPHHENEIAQSQAGYGCAPARY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V NNEKMSKSLGNFFTI++I + Y P LR FL HYRSP+++ + A
Sbjct: 253 WIHNGFVNINNEKMSKSLGNFFTIKEILQHYDPEVLRLFLAQTHYRSPIDFCEENMTMAR 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ +Y+ L++ F+ H T R + + ++ + +F M DD N++ L
Sbjct: 313 QALEKLYRFLEN-------FENHEDT-RTSDSIAPVLSDITRKFEEAMDDDFNSALALAS 364
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ ++ L K P + + + +VL I LP ++
Sbjct: 365 LFE--------GVHTLNKLNPSSAD---AKGIYDTYCRLGDVLGIFQSLPSQWFARQ--- 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
++L+ +++ IE R AAR++KDF+ +D+IR +L G+ + D + T WR
Sbjct: 411 ------STSQLSADEIAARIEARNAARRDKDFATADRIRDELLENGVEIKDSKEGTSWR 463
>gi|317131764|ref|YP_004091078.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
gi|315469743|gb|ADU26347.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
Length = 465
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 237/418 (56%), Gaps = 32/418 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IRRAN+ G ++ +Y Y D A L T+ PR ++++ I +I +
Sbjct: 74 KMIRRANEEGVAVAEVAEKYIAAYREDAAGLHVREATFHPRATENIADILALIRTLEQKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F YG+LS Q LE+ AG RV V RK +P DFALWKAAK GEPS
Sbjct: 134 YAYASDGDVYFRAHAFKEYGKLSHQPLEDLEAGARVDVSERKEDPVDFALWKAAKPGEPS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAM+ H+L DIH GG DLIFPHHENEIAQS A Y
Sbjct: 194 WDSPWGPGRPGWHIECSAMARHFLGQTIDIHCGGQDLIFPHHENEIAQSECANDAPFAHY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +N KMSKSLGNFFT+R++ +Y +R ++SA YR+P+N+S ++ +
Sbjct: 254 WMHNGYINIDNRKMSKSLGNFFTVREVAAKYGYEPIRFLMLSAQYRTPINFSDEIMEQSV 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ +Y+ + + AL ++ G+T PA ++ +++F A M DDLNT+ L
Sbjct: 314 AALDRLYRCREALKDAL---RQAGET----PADSAAVSAWQEKFDAAMDDDLNTADALAV 366
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ +K IN+ + + + + L+ +LGL L +
Sbjct: 367 LFE-LVKEINTRV---------AEGTAGADWLKGAAGLFGTFCDVLGL---------LYE 407
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
K++ L + +V LIE+R ARK KDF +D IR +L+ KGI L D + W
Sbjct: 408 RKERTL------DAEVEVLIEKRRQARKAKDFKTADAIRDELSAKGIVLKDTPQGVKW 459
>gi|423202014|ref|ZP_17188593.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
gi|404615625|gb|EKB12587.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
Length = 458
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 239/422 (56%), Gaps = 41/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + L+ R + D L + P +PR + H+E+I +++ +++ +
Sbjct: 73 KIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEIIELVQSLLDKE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + + +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHFDAETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D VA + E + AR A M DD NT +
Sbjct: 313 RAALERMYTALRDLPVAAAAGGEE-QVARFKEA---------------MDDDFNTPEAYS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K + +++ +L ++E+ +LG +LQ
Sbjct: 357 ALF-DLVREIN---------RQKGEDMAVAAALGA---RLRELGAVLG---------ILQ 394
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + LK E EE ++ +LI ER AR +K+++ +D R LT GI L D +T
Sbjct: 395 QDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLEDSAGKTS 454
Query: 419 WR 420
WR
Sbjct: 455 WR 456
>gi|383816533|ref|ZP_09971929.1| cysteinyl-tRNA synthetase [Serratia sp. M24T3]
gi|383294627|gb|EIC82965.1| cysteinyl-tRNA synthetase [Serratia sp. M24T3]
Length = 462
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 232/420 (55%), Gaps = 33/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE LS+R E D L L P +PR + H+ +I +++ Q+I+ D
Sbjct: 73 KIIKRAAENGEGFNDLSDRMIAEMHADFDSLGILRPDLEPRATHHIPEIVEIVQQLIDRD 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV V GDV F+V PNYG LS Q L+ +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVAVNGDVMFSVASDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM+ L S FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWNSPWGNGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSL NFFT+R + + Y ++R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRSQLNYSEENLKLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ G A PA + + F + M DD NT +
Sbjct: 313 RTSMERLYTALR------------GTDANAQPAGGE---EFEARFRSAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK + P ++ + E++ + ILGLL E
Sbjct: 358 VLFDMA-----RDINRLKSENP--------QAANGLAAELRRLAGILGLLAQD--PEQFL 402
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q +A E+ E + LI++R AR +KD++ +DQ R L GI L D T WR
Sbjct: 403 QSGAQADDNDEVAE--IETLIKQRKDARASKDWALADQARDRLNEMGIVLEDGASGTTWR 460
>gi|225017556|ref|ZP_03706748.1| hypothetical protein CLOSTMETH_01483 [Clostridium methylpentosum
DSM 5476]
gi|224949706|gb|EEG30915.1| hypothetical protein CLOSTMETH_01483 [Clostridium methylpentosum
DSM 5476]
Length = 464
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/409 (38%), Positives = 240/409 (58%), Gaps = 28/409 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G +S +Y +EY D L P T P+V+ M+ I D++ +++N
Sbjct: 72 KIIKKANEEGVEASEISEKYIKEYEKDAKGLNVRPATIHPKVTQSMDMIIDIVQHLVDNG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F K YG+LS LE+ AG RV V K +P DFA+WKAAK GEP+
Sbjct: 132 YAYESQGDVYFRTTKFKEYGKLSHMPLEDLEAGNRVEVSDIKEDPMDFAVWKAAKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ +YL D+H GG DLIFPHHENEIAQS A +Y
Sbjct: 192 WDSPWGKGRPGWHIECSAMATNYLGKTIDLHCGGQDLIFPHHENEIAQSECATGAVFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +N KMSKSLGNFFT+R++ E++ +R+ ++ AHYRSP+NY+V ++
Sbjct: 252 WMHNGYINVDNRKMSKSLGNFFTVREVAEKFGYEPIRYMMLQAHYRSPINYNVEVIEQCK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++ +Y ++ ALS ++ ++ I + +F M DD NT+ ++
Sbjct: 312 ASLERMYNFKKNIAFALSKAED----GEFTDKQKEAILARKQQFIDAMEDDFNTADAISA 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ ++ IN ++ + +Q ++L + + E++ +LGLL Y++
Sbjct: 368 VFE-LIRDINPLIS--GETLGSKQHIALAKEI------FDELIGVLGLL----YND---- 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
K E+ E V L+E+RAAARK K+F +D++R + G A+
Sbjct: 411 ------KEEEIPAE-VTALVEQRAAARKEKNFKLADELRDRIGELGYAI 452
>gi|118602151|ref|YP_903366.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567090|gb|ABL01895.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 462
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 242/421 (57%), Gaps = 35/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ +L+NR+ D L LPP +PR ++ M+QI MI +I
Sbjct: 73 KIIKRAIENKEDIYALTNRFIDAMHEDERALGVLPPDVEPRATNAMKQIFYMIKSLIEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+++V NYG+LS + ++ AG R+ ++S K+NP DF LWK +K EP
Sbjct: 133 FAYQAHNGDVYYSVRHFKNYGKLSRKNIDKLEAGARIEIESAKKNPLDFVLWKMSKPNEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAMS H+L + FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 193 SWDSPWGQGRPGWHIECSAMSTHHLGNHFDIHGGGMDLSFPHHENEIAQSEGANNCTFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V ++EKMSKSL NFFTIR I E Y+ LR+F++S+HYRSPLN+S L+ A
Sbjct: 253 TWMHIGFVNIDDEKMSKSLNNFFTIRSILESYNCETLRYFIMSSHYRSPLNFSDDNLNKA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y ++ + + T ++ + + F+ + +D NT L+
Sbjct: 313 KSSLSRLYTAIRGLNTSSTV------TEKVPMYFDYSV-----RFNEALDNDFNTPIALS 361
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A K +N L++K+ Q +L + L+K+ G Y +LQ
Sbjct: 362 ILFELA-KTVN-----LQRKKDVDQANALAQLLKKL----------------GDYIGILQ 399
Query: 361 QLKDKALKRA-ELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
DK LK+ L+ +V I R AR +K+F+ SDQIR L GI L D +T W
Sbjct: 400 MDADKFLKQGISLSNSEVDVKITSRNEARADKNFALSDQIRDKLAELGIVLEDNANDTTW 459
Query: 420 R 420
R
Sbjct: 460 R 460
>gi|386818264|ref|ZP_10105482.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
gi|386422840|gb|EIJ36675.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
Length = 461
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 171/425 (40%), Positives = 239/425 (56%), Gaps = 44/425 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE +L+ R+ D A L L P +PR + ++ ++ MI +++
Sbjct: 73 KIIKRAAENGEPIEALTARFIDAMHEDEAALNVLRPDDEPRATSNIPEMLAMIQTLLDKG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LSG++LE+ RAGERVAVD K +P DF LWKA+K GEP
Sbjct: 133 LAYQGSNGDVYYDVSKFDGYGKLSGRKLEDMRAGERVAVDEIKDDPMDFVLWKASKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WD+PWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS +V+
Sbjct: 193 AWDAPWGAGRPGWHIECSAMSQKLLGDHFDIHGGGSDLQFPHHENEIAQSEGCTGHKHVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG + N+EKMSKSLGNFFTIR++ + Y A+R F++++HYRS LNY+ QLD+A
Sbjct: 253 YWMHNGFIRVNDEKMSKSLGNFFTIREVLQHYRAEAVRFFILNSHYRSQLNYATDQLDAA 312
Query: 241 SDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
+ ++ +Y L+ E + + E+ + F A M DD NT +
Sbjct: 313 NASLSRLYTALRGLPEAGAANYTEYER-----------------RFDAAMDDDFNTPEAI 355
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ A I +R ++E L G +L
Sbjct: 356 AVMFELARD---------------------INRIRTEQSEGAAAPLGALLKLLGKALGIL 394
Query: 360 QQLKDKALKRAE----LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
Q ++ LK + L++ D+ LI++R AAR K++ +SD+IR +L KG+ L D
Sbjct: 395 QDNPEEWLKGSAGADGLSDADIDALIQQRLAARAAKNWGESDRIRDELKTKGVILEDSAG 454
Query: 416 ETIWR 420
T WR
Sbjct: 455 ATSWR 459
>gi|349611156|ref|ZP_08890463.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
gi|348614537|gb|EGY64083.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
Length = 473
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 236/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K + L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDVHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|310659543|ref|YP_003937264.1| cysteinyl-tRNA synthetase [[Clostridium] sticklandii]
gi|308826321|emb|CBH22359.1| cysteinyl-tRNA synthetase [[Clostridium] sticklandii]
Length = 466
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 237/427 (55%), Gaps = 39/427 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G +P+ ++ +Y EY D L T PRV++++E I I +I+
Sbjct: 72 KIIKRANEEGISPIEVAEKYIAEYFKDADALGIKRATVHPRVTENIENIITFIEDLISKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY + GDV+F + YG+LS Q LE G R+ V+ K++P DFALWKA K GE
Sbjct: 132 FAYELNGDVYFNSQAYKEYGKLSKQNLEELNLGARIDVNDEKKHPIDFALWKAKKEGEIG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS MSA YL DIH GG DLIFPHHENEIAQS A Y
Sbjct: 192 WQSPWGEGRPGWHIECSVMSARYLGDTIDIHAGGQDLIFPHHENEIAQSEARSGKQFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYS---VLQLD 238
WMHNG++ +N+KMSKSLGNFFT+R I + +R FL+SAHYR+P+N+S +LQ
Sbjct: 252 WMHNGYINVDNQKMSKSLGNFFTVRDILSEFSGQVIRFFLLSAHYRNPVNFSKELILQAK 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNT 295
+ + L + + L H K ++N + + ++ L RD F M DD+NT
Sbjct: 312 AG-------MERLANSKERLVFTISHAK-GQMNESELELVSALENHRDRFIEAMDDDINT 363
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ ++ F+ A +F N+++ + ++ LSL NE+ VL I+
Sbjct: 364 ADAISIIFELA-RFSNTNVTENSSLEWAEKNLSLF-------NELTGVLNII-------- 407
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
KA E + +LI++R A+KNKDF+ +D IR +L GI + D +
Sbjct: 408 ---------KAEDTDSNDNEQIEKLIKDRVEAKKNKDFALADAIRDELKSMGIEIEDTRQ 458
Query: 416 ETIWRPC 422
T W+
Sbjct: 459 GTKWKKV 465
>gi|46143889|ref|ZP_00133878.2| COG0215: Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208389|ref|YP_001053614.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|187629818|sp|A3N0S3.1|SYC_ACTP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126097181|gb|ABN74009.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 459
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 238/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D DL L P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS LNYS+ LD A
Sbjct: 253 YWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSLLNYSLDNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C++++ E + + F A M DD NT L
Sbjct: 313 RSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSE 357
F+ I +N LK + K L++ +KE+ +LGLL P A+
Sbjct: 358 VLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLGLLYQDPEAF-- 401
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
LQ D E+ E + LI++R A+ K+++ +D++R L I L D T
Sbjct: 402 -LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|254360582|ref|ZP_04976731.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452745743|ref|ZP_21945575.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153091122|gb|EDN73127.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452085882|gb|EME02273.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 458
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 235/423 (55%), Gaps = 43/423 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D L L P +PR + H+ +I M+ ++I+N
Sbjct: 73 KIIKRALENNETCDELVDRMIAEMHKDFDALNILRPDVEPRATKHIPEIIAMVEKLIHNG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +KAGEP
Sbjct: 133 HAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSIKKNPMDFVLWKMSKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS L+YS+ LD A
Sbjct: 253 YWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSLLDYSIDNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ C+V+ EH A F M DD NT L
Sbjct: 313 RSALERLYTALRGCDVSGEAIGEHYVEA----------------FKTAMDDDFNTPGALA 356
Query: 301 GAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ I LN LK + K L++ +KE+ +LGL L
Sbjct: 357 VLFE-----IARELNKLKTEDMAKANGLAV---------RLKELAGVLGL---------L 393
Query: 360 QQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+Q D LK +E ++ LI++R A+ K+++ +D++R L I L D T
Sbjct: 394 EQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTPNGT 453
Query: 418 IWR 420
IWR
Sbjct: 454 IWR 456
>gi|452944310|ref|YP_007500475.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. HO]
gi|452882728|gb|AGG15432.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. HO]
Length = 488
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 240/422 (56%), Gaps = 12/422 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN+ ++ +S++NRY Y +DM + P +PRV++HME+I +I+++I
Sbjct: 74 KIINKANEENKDFMSIANRYIARYYLDMEAINVKPANVEPRVTEHMEEIISLISKLIELG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+++ YG+LS + E AG R+ +KRNP DFALWKA+K+ EP
Sbjct: 134 KAYESDGDVYFSIDSFKEYGKLSKRSPEELEAGARIEPSLKKRNPLDFALWKASKSHEPG 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPW GRPGWH EC AM +L DIH GGIDL+FPHHENEIAQ+ + Y
Sbjct: 194 WESPWSYGRPGWHTECVAMIFKHLGETIDIHAGGIDLVFPHHENEIAQAESITGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG VT +KMSKSLGNF T+++I +YHP LR ++ HYRSPL++S +++
Sbjct: 254 WMHNGLVTVGGKKMSKSLGNFITLKEIYTKYHPDVLRLLVLFTHYRSPLDFSFEKMEETK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A + ++D E L + GK ++ +++F+ +S+D NTS +
Sbjct: 314 KAYERLKSAIEDIE-PLKAIAKEGKPV-VDIDFYSLEKSTQEQFYKALSEDFNTSLAMAQ 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEVKEVLR-ILGLLPPGAYSEV 358
F + LN K + K ++ +E + N +K+ L+ I GLL
Sbjct: 372 VFNAV-----AELNRAKTESFKIGYITPKELEGYLFLANSLKQTLKDIFGLLEENTLQNT 426
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L+ L+ + ++ E + LI+ R A++NKDF +D IR +L GI L D TI
Sbjct: 427 LKTLEPAS--SVNISTEFLEILIKARNLAKENKDFKVADFIRDELLNYGIKLEDTKAGTI 484
Query: 419 WR 420
W+
Sbjct: 485 WK 486
>gi|282882291|ref|ZP_06290922.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
gi|281297841|gb|EFA90306.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
Length = 467
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 166/421 (39%), Positives = 237/421 (56%), Gaps = 29/421 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP-PTYQPRVSDHMEQIKDMITQIINN 60
+II RAN+ + ++ +Y +E+ D + L T PR + ++Q+ I +I+
Sbjct: 72 KIINRANEENKTTEQIAEKYIEEFKKDASALGLYDYQTINPRATHVVDQMISFIQTLIDK 131
Query: 61 DCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV+F V YG+LSG+++E+ RAG RV V KRNP DFALWK K EP
Sbjct: 132 GAAYVSSGDVYFDVNYDKEYGKLSGKKIEDLRAGSRVDVSDLKRNPYDFALWKNKKENEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W +PWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS C D+ +
Sbjct: 192 YWKAPWGEGRPGWHIECSVMAKTLLGDTIDIHTGGEDLKFPHHENEIAQS-ETCNDAPFA 250
Query: 181 -YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
+W+HNG +T NNEKMSKS GNFFT+R++++ Y LR FL++ YR+P+N+S ++
Sbjct: 251 RFWLHNGMITVNNEKMSKSKGNFFTVREVSKEYDLEILRFFLLTTSYRAPINFSREVMNQ 310
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
+A+ +Y E + +E T E+ R F M DDLNT+ +
Sbjct: 311 TKNALERLYNAKYKLEKDIELSKERDLTED-EKKIEEKFQAHRQSFEKAMEDDLNTADAI 369
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
T F D +K IN +L+ K+ ++ +SL+++L K ILG++
Sbjct: 370 TAIF-DLVKDINVNLDENSAKKLLEEGMSLLKTLTK----------ILGIMERE------ 412
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
K + +E++L LI+ER ARKNKDF ++D+IR +L KGI + D K W
Sbjct: 413 --------KNCDDLDEEILNLIKEREDARKNKDFKRADEIRDELLEKGIEIKDTRKGIEW 464
Query: 420 R 420
+
Sbjct: 465 K 465
>gi|161869111|ref|YP_001598277.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
gi|161594664|gb|ABX72324.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
Length = 699
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 299 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 358
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 359 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 418
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 419 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 478
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 479 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 538
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ +N
Sbjct: 539 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSEN-------------VNDYTRR 585
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 586 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 627
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 628 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLN 681
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 682 EHKIILEDNAGGTTWR 697
>gi|157962505|ref|YP_001502539.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
gi|187631637|sp|A8H617.1|SYC_SHEPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157847505|gb|ABV88004.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
Length = 459
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 232/423 (54%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ SL+ R E D L P +PR + HM +I +M+ ++I +
Sbjct: 73 KIIKRANENKESCDSLTERLIAEMHRDFDALNMARPDNEPRATLHMPEIIEMVEKLIERE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V P YGRLSGQ LE +AG RV V+ KR+P DF LWK +K GEP
Sbjct: 133 HAYVASNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRDPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDKEKMSKSLNNFFTIRDVLGHYDATTVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ IY L+D ++ T PA E +F + M DD NT +
Sbjct: 313 KSGLERIYTALKDLDL----------TVEAAPAEE-----FVAKFKSAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K ++ +L ++ +VL ILG
Sbjct: 358 VLF-DMVREIN---------RLKATDMAKASALGVALKQLADVLGILG------------ 395
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D K E +++V + LI ER AR KD+ +D R L G+ L D + T
Sbjct: 396 QDVDTFFK-GEGNDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILEDGPEGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|117617683|ref|YP_857264.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559090|gb|ABK36038.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 458
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 238/422 (56%), Gaps = 41/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G L+ R + D L + P +PR + H+ +I +++ +++ +
Sbjct: 73 KIIKRAAETGVTCDDLTARLIGDMHADFDALGMVRPDVEPRATQHIGEIIELVQSLLDKE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D A + + + AR A M DD NT +
Sbjct: 313 RAALERMYTALRDLPAAAAAGGDE-QVARFKEA---------------MDDDFNTPEAYS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K + +++ +L ++E+ +LG +LQ
Sbjct: 357 ALF-DLVREIN---------RQKGEDMAVAAALGA---RLRELGAVLG---------ILQ 394
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + LK E EE ++ QLI +R AR +K+++ +D R LT GI L D +T
Sbjct: 395 QDPEAFLKGDEADEEVAEIEQLIAQRNQARADKNWAAADAARNRLTEMGIVLEDSAGKTS 454
Query: 419 WR 420
WR
Sbjct: 455 WR 456
>gi|381401996|ref|ZP_09926885.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
gi|380833122|gb|EIC13001.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
Length = 469
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 172/431 (39%), Positives = 233/431 (54%), Gaps = 50/431 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G L+ + D L L P +P+ ++H+ Q+ MI +I N
Sbjct: 73 KIIKRANERGITIQELTEEFITAMNEDSDKLGVLRPDVEPKATEHIPQMIQMIEDLIANG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD+ KR+P DF LWKAAK EP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTNKRDPLDFVLWKAAKPEEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA----CQ- 175
W+SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQSC A C
Sbjct: 193 HWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQSCGAHNSSCNH 252
Query: 176 -------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 228
S+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y P +R F++ AHYRS
Sbjct: 253 NHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQPEVVRFFILRAHYRS 312
Query: 229 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 288
PLNYS LD A +++ +Y TL + VA + F+ T N+ +F A
Sbjct: 313 PLNYSDAHLDDAKNSLARLYNTLNN--VAPAAFELTENT-----------NEYTRKFFAA 359
Query: 289 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 348
M+DD T+ ++ F+ L + K L+ + +LG
Sbjct: 360 MNDDFGTAEAMSVLFE------------LANEANKHNSAEFAGCLKALGG-------VLG 400
Query: 349 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 408
LL + + D L E+ E LI +R AR+ K++++SD+IR L I
Sbjct: 401 LLQEEPQAFLQSGASDDGLSADEINE-----LIAQRKTARETKNWAESDRIRDVLAAHKI 455
Query: 409 ALMDMGKETIW 419
+ D T W
Sbjct: 456 IVKDGADGTTW 466
>gi|313893308|ref|ZP_07826883.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442204|gb|EFR60621.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
Length = 482
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 245/427 (57%), Gaps = 31/427 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G + +++NRY Y M L PRVS H+E I MI+ +I
Sbjct: 75 KIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIEDIIAMISTLIEKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD RK+NP DFALWKAAK GEP
Sbjct: 135 YAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPY 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS C+ Q V
Sbjct: 195 WESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSG-QHPAV 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 254 RYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEE 313
Query: 240 ASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDL 293
A+ ++ + L+ CE P E R+ A++ +EF A MSDD
Sbjct: 314 ANKSLERLSTAIENLLYLEKCEPG--PCDE---AQRLLEKAKE----YEEEFEAAMSDDF 364
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPG 353
NT+ + F A +N+ + ++ + E++ +++ K + ++G+L
Sbjct: 365 NTALATSSMFGLA-----KEINIYYQAVTGREGVVCQEAIAEVKRIFKFMTEVIGILE-- 417
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
+ + A EE + ++ R A R K + +D IR L+ GI + D
Sbjct: 418 ------KAWEGNTGANAAEYEELMQVILSVRQACRDQKQWGLADCIRDRLSEIGITIEDS 471
Query: 414 GKETIWR 420
+ W+
Sbjct: 472 PQGARWK 478
>gi|410666863|ref|YP_006919234.1| cysteinyl-tRNA synthetase [Thermacetogenium phaeum DSM 12270]
gi|409104610|gb|AFV10735.1| cysteinyl-tRNA synthetase CysS [Thermacetogenium phaeum DSM 12270]
Length = 507
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 177/439 (40%), Positives = 242/439 (55%), Gaps = 26/439 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + + L+ +Y EY D L+ T PR S+H+ ++ DM+ +
Sbjct: 73 KIINRAREENTSARELAEKYIGEYFRDADALRVKRATVHPRASEHIPEMIDMVRVLCEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F+V P YG+LSG+ LE AG RV VD RKR+P DF LWKAAK GEP
Sbjct: 133 IAYEYGGDVYFSVRSFPGYGKLSGRTLEEMLAGARVEVDERKRDPLDFVLWKAAKPGEPF 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA-ACQDSNVS 180
W+SPWG GRPGWH+ECS MS YL FDIHGGG DLIFPHHENEIAQ+ A A +
Sbjct: 193 WESPWGAGRPGWHLECSVMSLKYLGFGFDIHGGGSDLIFPHHENEIAQAEAYAGSEPFAR 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG VT + EKMSKSLGNFF +R + + + P LR FL+S HYRSPL+++ L +A
Sbjct: 253 YWVHNGFVTVDEEKMSKSLGNFFLVRGLLQEWAPEILRFFLLSTHYRSPLDFNDAALKNA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFHARMSDDLNTSH 297
+ + TL + Q R+ AE +++ D +F M DD NT+
Sbjct: 313 RKSFNRLGNTLDLLNDTVGDGQGKKTAGRLAREAEAFRSRVADCVAQFEEAMDDDFNTAL 372
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L F + IN +N + QP L L+ +R+ +L +LGL+ PG E
Sbjct: 373 ALAALFNMG-REINGFING-DQFQPTPGVLYLLAQIREY---YLNLLDVLGLV-PGEKRE 426
Query: 358 VLQQ-----------LKDKALKR-----AELTEEDVLQLIEERAAARKNKDFSKSDQIRA 401
+ ++ LKD+A R + E + L++ R AR+ K++ SD +R
Sbjct: 427 LGEEYRQPLIRIALSLKDEAGGRLPDRLPDGPRELLELLLKIRREARQQKNYQLSDALRD 486
Query: 402 DLTRKGIALMDMGKETIWR 420
L +GI + D + T WR
Sbjct: 487 ALREEGIIIEDTPRGTRWR 505
>gi|6899996|emb|CAB71305.1| cysteinyl tRNA synthetase [[Clostridium] sticklandii]
Length = 443
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 237/427 (55%), Gaps = 39/427 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G +P+ ++ +Y EY D L T PRV++++E I I +I+
Sbjct: 49 KIIKRANEEGISPIEVAEKYIAEYFKDADALGIKRATVHPRVTENIENIITFIEDLISKG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY + GDV+F + YG+LS Q LE G R+ V+ K++P DFALWKA K GE
Sbjct: 109 FAYELNGDVYFNSQAYKEYGKLSKQNLEELNLGARIDVNDEKKHPIDFALWKAKKEGEIG 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS MSA YL DIH GG DLIFPHHENEIAQS A Y
Sbjct: 169 WQSPWGEGRPGWHIECSVMSARYLGDTIDIHAGGQDLIFPHHENEIAQSEARSGKQFARY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYS---VLQLD 238
WMHNG++ +N+KMSKSLGNFFT+R I + +R FL+SAHYR+P+N+S +LQ
Sbjct: 229 WMHNGYINVDNQKMSKSLGNFFTVRDILSEFSGQVIRFFLLSAHYRNPVNFSKELILQAK 288
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNT 295
+ + L + + L H K ++N + + ++ L RD F M DD+NT
Sbjct: 289 AG-------MERLANSKERLVFTISHAK-GQMNESELELVSALENHRDRFIEAMDDDINT 340
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ ++ F+ A +F N+++ + ++ LSL NE+ VL I+
Sbjct: 341 ADAISIIFELA-RFSNTNVTENSSLEWAEKNLSLF-------NELTGVLNII-------- 384
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
KA E + +LI++R A+KNKDF+ +D IR +L GI + D +
Sbjct: 385 ---------KAEDTDSNDNEQIEKLIKDRVEAKKNKDFALADAIRDELKSMGIEIEDTRQ 435
Query: 416 ETIWRPC 422
T W+
Sbjct: 436 GTKWKKV 442
>gi|299143767|ref|ZP_07036847.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518252|gb|EFI41991.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 465
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 241/423 (56%), Gaps = 35/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP-PTYQPRVSDHMEQIKDMITQIINN 60
++I +AN G ++ RY +E+ VD L T PR ++H+ QI D I +I+
Sbjct: 72 KLINKANAEGITVAEVAERYIKEFKVDANGLHLYDYETLNPRATEHINQIIDFIQILIDK 131
Query: 61 DCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
+ AYV EGDV+F + + +YG+LS ++LE+ +G RV V K+NPADFALWKA K GEP
Sbjct: 132 NAAYVSEGDVYFDINSAKDYGKLSHKKLEDLISGARVDVSDIKKNPADFALWKAKKEGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W +PWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS
Sbjct: 192 YWTAPWGEGRPGWHIECSVMAKTLLGETIDIHSGGEDLQFPHHENEIAQSETCNGVPFAK 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+W+HNG +T +NEKMSKS GNFFT+R+++E ++ LR FL+ HYRSP+N+S ++
Sbjct: 252 FWLHNGMITVDNEKMSKSKGNFFTVREVSEEFNLEVLRFFLLGCHYRSPINFSREIMEQT 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---FHARMSDDLNTSH 297
+ + IY + + L F E+ + + + + DE F M DD+NT+
Sbjct: 312 KNGLERIY----NAKYKLEEFLENCIDREFSDEDKKQLGIIADEIKFFEESMEDDINTAD 367
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+T A + +KFIN LN + ++L + +I N + + ++LG+L
Sbjct: 368 AIT-AIYNIVKFINIELN-----EDSNKKL-----VDEIYNTLLRLSKVLGILE------ 410
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
L+R + EE V +LI+ER ARKNKDF ++D+IR L K I + D T
Sbjct: 411 ---------LERENIDEE-VERLIKEREDARKNKDFKRADEIRDILASKNILIEDTRTGT 460
Query: 418 IWR 420
W+
Sbjct: 461 KWK 463
>gi|313667586|ref|YP_004047870.1| cysteinyl-trna synthetase [Neisseria lactamica 020-06]
gi|313005048|emb|CBN86480.1| cysteinyl-trna synthetase (ec 6.1.1.16) (cysteine--trna ligase)
(cysrs) [Neisseria lactamica 020-06]
Length = 473
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 173/436 (39%), Positives = 241/436 (55%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGKGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ A + +N + N ++ +K +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------QLAGRLKALG 400
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 401 GIIGLLQ----RDPTEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDTAGGTTWR 471
>gi|229917379|ref|YP_002886025.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
gi|259511833|sp|C4KZR7.1|SYC_EXISA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229468808|gb|ACQ70580.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
Length = 465
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 175/427 (40%), Positives = 237/427 (55%), Gaps = 44/427 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR AN+LGE+ +L+NRY + YL D L P PRV+D ME+I + I Q+
Sbjct: 73 KIIRTANELGEDTETLTNRYIEAYLADTGALNVQPADVHPRVTDTMEEIIEFIRQLETEG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F +K YG+LS Q +E+ RAG RV V +K +P DF LWKAAK EPS
Sbjct: 133 FAYESEGDVYFRTKKFETYGKLSQQSIEDLRAGSRVDVGEKKEDPLDFVLWKAAKPDEPS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ +L + DIH GG DL FPHHENEIAQS A +Y
Sbjct: 193 WDSPWGKGRPGWHIECSAMAKKHLGTTIDIHAGGHDLKFPHHENEIAQSEACNHAKFANY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + NEKMSKSLGNF + + + P+ LR F++S HYR P+NYS ++ A+
Sbjct: 253 WLHNGFINIENEKMSKSLGNFLLVHEALKEVDPMVLRFFMLSVHYRHPINYSRELIEQAA 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
+ I + Q+ E LS TA + A+E KL + F M DD+NT++
Sbjct: 313 NGWSRIKEAYQNIEYRLSV------TAGLGEASESMERKLESIKASFIESMDDDINTANA 366
Query: 299 LTGAFQDALKFINSSLNMLKK-----KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPG 353
+T F A N+ K K +Q LSL + E+ +LGL
Sbjct: 367 VTVLFDLA-----REANIYAKADHVAKATLEQVLSLFD----------ELTGVLGL---- 407
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
+ EL + ++ QLI+ER AR ++F+++D+IR L + I L D
Sbjct: 408 -----------TLAEEKELLDAEIDQLIQERNDARAARNFARADEIRDLLKEQNIQLEDT 456
Query: 414 GKETIWR 420
+ W+
Sbjct: 457 AQGVRWK 463
>gi|261378624|ref|ZP_05983197.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
gi|269144957|gb|EEZ71375.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
Length = 473
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 237/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHSCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 NHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ +N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAKFDLFEN-------------VNDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|418291506|ref|ZP_12903501.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
gi|372199758|gb|EHP13951.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
Length = 473
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 240/436 (55%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ A + +N + N ++ +K +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------QLAGRLKALG 400
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ + L+ E++ LI R AR +K++++SD+IR L
Sbjct: 401 GIIGLLQRDP-TEFLQ----GGVASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|254804107|ref|YP_003082328.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
gi|254667649|emb|CBA03462.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
Length = 475
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 238/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 75 KIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 135 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 195 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 254
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 255 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 314
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ +P E G + N
Sbjct: 315 HYRSPLNYSDAHLDDAKGALTRLYTTLKN-----TPAAEFGLSENANDYTR--------R 361
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 362 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 403
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 404 -IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAESDRIRDLLN 457
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 458 EHKIILEDNAGGTTWR 473
>gi|374578926|ref|ZP_09652020.1| cysteinyl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
gi|374415008|gb|EHQ87443.1| cysteinyl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
Length = 452
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 243/420 (57%), Gaps = 20/420 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R + G +PL+L +Y +EY D L LP T P+ ++H+ ++ ++I +I++
Sbjct: 49 KIIQRGHVEGMDPLALGQKYIEEYFKDAKALNLLPATIHPKATEHIPEMIEIIQGLIDSG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
Y VEGDV+FAV++ P+YG+LSG+ LE+ +AG RV VD RKR+P DFALWK AK GEP+
Sbjct: 109 LGYEVEGDVYFAVDRFPDYGKLSGRTLEDMKAGARVEVDERKRHPMDFALWKKAKPGEPA 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W SPWG GRPGWHIEC+AMS YL + FDIHGGG DL FPHHENEIAQ+ + +
Sbjct: 169 WQSPWGEGRPGWHIECTAMSLKYLGAGFDIHGGGEDLAFPHHENEIAQTEGYLKGRTFAH 228
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHN +T N EKMSKSLGNFFTIR++ +R +L+ HYRSPL+++ L A
Sbjct: 229 YWMHNAFLTINQEKMSKSLGNFFTIRELLVNSPGEVIRFYLLGTHYRSPLDFNDQNLIMA 288
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ + +++ + AL E + + + R+ F M DD N++
Sbjct: 289 QKGLERLQTSVRLAQEALER-SESSQNGQRGTELFKASKEAREAFERAMDDDFNSALAYA 347
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + ++N ++ P + L E+ R + E+ +VL L P + E
Sbjct: 348 ALFE-----LAKTMNGYVQENPLSSE-GLAEAQRTL-VELGDVLGFDLLHPAQVHVE--- 397
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D+ L + E VLQ+ R+ +R+ KD+ +D IR L KGI + D + W+
Sbjct: 398 --NDEILNQ---VMEVVLQI---RSKSRQKKDWEMADFIRDMLKEKGIIIEDTPQGARWQ 449
>gi|406676594|ref|ZP_11083780.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
gi|404626817|gb|EKB23627.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
Length = 458
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 239/422 (56%), Gaps = 41/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + L+ R + D L + P +PR + H+E+I +++ +++ +
Sbjct: 73 KIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEIIELVQSLLDKE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D VA + + + AR A M DD NT +
Sbjct: 313 RAALERMYTALRDLPVAAAAGGDE-QVARFKEA---------------MDDDFNTPEAYS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K + +++ +L ++E+ +LG +LQ
Sbjct: 357 ALF-DLVREIN---------RQKGEDMAVAAALGA---RLRELGAVLG---------ILQ 394
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + LK E EE ++ +LI ER AR +K+++ +D R LT GI L D +T
Sbjct: 395 QDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLEDSTGKTS 454
Query: 419 WR 420
WR
Sbjct: 455 WR 456
>gi|269837621|ref|YP_003319849.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269786884|gb|ACZ39027.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 468
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 235/423 (55%), Gaps = 34/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA LG P L+ R +++L D A L P T PR + ++ I +MI +I
Sbjct: 74 KIIQRAATLGIEPRELAERLIEDWLRDTARLNVKPATIYPRATQEIDTIIEMIKGLIAEG 133
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY VEG DVFF V+ P YG+LS + L+ AG R+ VD RK NP DFALWK AK GEP
Sbjct: 134 HAYAVEGGDVFFRVDSFPGYGKLSHRSLDEMMAGARIEVDPRKENPMDFALWKGAKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAAC-QDSNV 179
+WDSPWGPGRPGWHIECSAM +L + DIHGGG DLIFPHHENEIAQS A Q+
Sbjct: 194 AWDSPWGPGRPGWHIECSAMIYRHLGDRIDIHGGGADLIFPHHENEIAQSEAFTDQEPLA 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
+W+HNG + EKMSKSLGN TIR++ ER A R ++S+HYRSPL +S +DS
Sbjct: 254 RFWVHNGLLQLGGEKMSKSLGNLITIRELLERGDGEAFRFLVLSSHYRSPLTFSDEAMDS 313
Query: 240 ASDAVFYIYQTLQDCEVALSPFQ--EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
A + + ++ + A +P +H ARI ++ R EF A M DDLNT
Sbjct: 314 ARRGLARLQSAVRGFDPATAPATAPDHA-LARIA-------DETRAEFRAAMDDDLNTPV 365
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L+ F+ A + IN + S++ KE+ +LGL E
Sbjct: 366 ALSHLFELA-RAINRERDAGAPAAAVAYAQSVL----------KELAGVLGLT-----LE 409
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D+A+ E V L+E RA RK + + +D+IR L GI + D + +
Sbjct: 410 TTTQRTDEAI------EPFVDLLLEVRAELRKQRLWDLADRIRVRLGELGIRVEDTAQGS 463
Query: 418 IWR 420
WR
Sbjct: 464 TWR 466
>gi|421564183|ref|ZP_16009991.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
gi|402338983|gb|EJU74206.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
Length = 473
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 177/438 (40%), Positives = 236/438 (53%), Gaps = 58/438 (13%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDTHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NGYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 402
I+GLL P A+ L+ A L+ E++ LI +R AR +K++++SD+IR
Sbjct: 402 -IIGLLQRDPTAF------LQGGAASDG-LSNEEIEDLIAQRKQARADKNWAESDRIRDL 453
Query: 403 LTRKGIALMDMGKETIWR 420
L I L D T WR
Sbjct: 454 LNEHKIILEDNAGGTTWR 471
>gi|323526548|ref|YP_004228701.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383550|gb|ADX55641.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 465
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 184/426 (43%), Positives = 241/426 (56%), Gaps = 44/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE SL++R+ D L P +PR +D + Q+ MI + N
Sbjct: 75 KIIRRAVENGETIKSLTDRFIAALHEDADALGIARPDIEPRATDFIPQMLGMIETLEANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV K YG+LSG+ LE+ RAGERVA + K +P DF LWK +KAGEP
Sbjct: 135 YAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKEDPLDFVLWKRSKAGEP 194
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ WDS +G GRPGWHIECSAM L FDIHGGG DL FPHHENEIAQS AA
Sbjct: 195 ADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQDLQFPHHENEIAQSEAATGQP 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG+V +NEKMSKSL NFFTIR++ +Y +R F+ AHYRSPLNYS + +
Sbjct: 255 FVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAHYRSPLNYSDVHI 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A +A+ +Y L D ++P + AA D F A M+DD NT
Sbjct: 315 DDARNALGRLYTALTD----VAP----------DGAALDWNEAHAQRFQAAMNDDFNTPV 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAY 355
++ F+ L + + + +L LR + +LGLL P AY
Sbjct: 361 AVSVLFE------------LATEVNRTRDPALARQLRSLGA-------VLGLLGREPRAY 401
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-G 414
LQQ A++ A L + I ERAAA++ KD++ +D+IRA+L G+AL D G
Sbjct: 402 ---LQQAAGAAVEGA-LEPAAIEAKIAERAAAKQAKDYAAADRIRAELLEAGVALEDKPG 457
Query: 415 KETIWR 420
T WR
Sbjct: 458 GLTEWR 463
>gi|347731165|ref|ZP_08864267.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
gi|347520052|gb|EGY27195.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
Length = 485
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 165/419 (39%), Positives = 234/419 (55%), Gaps = 9/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G + ++ +Y + DM L L +PR + H+ ++ + ++I
Sbjct: 72 KIITRANQEGLSSQEVAEKYIATFYEDMDRLNVLRADIEPRATTHIAEMISLCERLIEQG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V P YG+LSG+ +++ R+G RVA K +P DFALWK AK GEP
Sbjct: 132 KAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGEEKEDPLDFALWKGAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAMS +L DIHGGG DL+FPHHENEIAQ+ AA V
Sbjct: 192 YWESPWGRGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQTEAALGKDFVR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N EKMSKSLGNF TIR I E Y P LR+FL++ HYRSP++++ +D A
Sbjct: 252 YWVHNGFVQVNAEKMSKSLGNFRTIRDILENYLPETLRYFLLTKHYRSPIDFTFESMDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ IY+ L L +E + + + LR F M DD+NT+ L
Sbjct: 312 EKNLKRIYEALGLLHAELQ--REKWTSGPLPKDVTEEFEGLRQAFADAMEDDMNTAAALG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F ++ N L+ K Q K + E R++ +E + +LG+ +E L
Sbjct: 370 HVFT-MVRLANRILD--NKGQRKTEGAR--ELFRRVLDEARAWTAVLGVFGRDP-AEFLA 423
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+L+ + R + V +L++ R AR +KDF+++D IR ++ GI + D +W
Sbjct: 424 ELRACRVARKSIDPARVEELMQARINARADKDFARADAIRDEIAALGIEVRDTPSGAVW 482
>gi|307256969|ref|ZP_07538746.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306864544|gb|EFM96450.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 459
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 237/421 (56%), Gaps = 38/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D DL L P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS LNYS+ LD A
Sbjct: 253 YWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSLLNYSLNNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C++++ E + + F A M DD NT L
Sbjct: 313 RSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ I +N LK + K L++ +KE+ +LGLL Y +
Sbjct: 358 VLFE-----IAREVNKLKTEDMAKANGLAVC---------LKELAAVLGLL----YQDPE 399
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
L+ A E+ E + LI++R A+ K+++ +D++R L I L D T W
Sbjct: 400 AFLQGDA-NNDEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTTW 456
Query: 420 R 420
R
Sbjct: 457 R 457
>gi|421555761|ref|ZP_16001686.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
gi|402328737|gb|EJU64103.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
Length = 473
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NGYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ + L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|154485049|ref|ZP_02027497.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
27560]
gi|149734002|gb|EDM50121.1| cysteine--tRNA ligase [Eubacterium ventriosum ATCC 27560]
Length = 470
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 169/425 (39%), Positives = 248/425 (58%), Gaps = 36/425 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++A + G +S RY +E DM DL P T P + ++ + +MI +I+
Sbjct: 72 KIIKKAIEEGTTAEEISQRYIKECKKDMHDLNIEPATTHPLATQEIDGMIEMIKTLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY +G V++ K +YG+LS + +++ AG R VA + K +P DF LWK K G
Sbjct: 132 YAYDADGTVYYRTRKFKDYGKLSKKNIDDLEAGHRDIKVAGEESKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPW GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQS AA
Sbjct: 192 EPSWPSPWSDGRPGWHIECSVMSKKYLGDEIDIHAGGEDLIFPHHENEIAQSEAANGCEF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YWMHNG + NN+KMSKSLGNFFT+R I+E+Y LR F++SAHYRSPLN+S ++
Sbjct: 252 SKYWMHNGFLNINNKKMSKSLGNFFTVRDISEKYDLQVLRFFMLSAHYRSPLNFSDDLME 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFHARMSDDLNT 295
SA + + I + +S +GK ++ A +++ ++ +F M DD NT
Sbjct: 312 SAKNGLERIITSGAKIRDIIS----NGKDGKVTDAEAKLLDEAKEYITKFEEAMDDDCNT 367
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
++ ++ F+ +KF NS+LN + K+ + E L K+ N +LG+
Sbjct: 368 ANAISAVFE-LVKFANSNLN---EGSTKEFAAGVYEILDKLCN-------VLGI------ 410
Query: 356 SEVLQQLKDKALKRAELTEEDVL-QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+L++ ++K + +ED + ++I +RA A+K++DF+ +DQIR +L KGI L D
Sbjct: 411 --ILEKEEEK------VGDEDYIEEMIAKRAQAKKDRDFAMADQIRDELAAKGIVLKDTR 462
Query: 415 KETIW 419
+ T W
Sbjct: 463 EGTKW 467
>gi|310826702|ref|YP_003959059.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
gi|308738436|gb|ADO36096.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
Length = 465
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 165/421 (39%), Positives = 235/421 (55%), Gaps = 27/421 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II R+ + G ++++Y EY D L PRVSDHM +I +MI ++
Sbjct: 72 KIINRSIEEGITAAEVADKYIAEYFKDADALGIRRADVHPRVSDHMPEIIEMIKELEARG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+G+V++ V+ +YG+LS Q +++ ++G R+ V+ KR+P DFALWK K GEP
Sbjct: 132 LAYNVDGNVYYQVDHFHDYGKLSKQSIDDLKSGARIDVNDEKRSPLDFALWKKKKDGEPY 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS +L DIHGGG DLIFPHHENEIAQS +C +Y
Sbjct: 192 WESPWGQGRPGWHIECSAMSRKHLGESIDIHGGGQDLIFPHHENEIAQSEGSCGCKFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ NNEKMSKS GNFFT+R I + Y +R F++ AHYRSP+N+S L A
Sbjct: 252 WVHNGYININNEKMSKSKGNFFTVRDIAKHYDLEVVRMFMLMAHYRSPVNFSDELLGQAQ 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+A+ +Y E L + + D + + + F M+DDLNT+ +
Sbjct: 312 NALERLYNAKYQMEYLLENNKSEA-ASEDEKTWMDNLAQYKKGFIDAMNDDLNTADAIAA 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ ++ NS+L+ ++ + L L KE+ ++GL
Sbjct: 371 IFE-LVRDTNSNLSEASSREAVKAALDLF----------KELTGVIGL------------ 407
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
A ++ E +V LI +R ARKNKDFS +D+IR L KGI L D + W+
Sbjct: 408 ---AAKEKETDLEAEVEALIAQRQEARKNKDFSLADEIRDALLAKGIILEDTREGVKWKK 464
Query: 422 C 422
Sbjct: 465 A 465
>gi|421562116|ref|ZP_16007952.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
gi|254671629|emb|CBA09335.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha153]
gi|402335505|gb|EJU70770.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
Length = 473
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 240/436 (55%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ A + +N + N ++ +K +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------QLAGRLKALG 400
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ + L+ E++ LI R AR +K++++SD+IR L
Sbjct: 401 GIIGLLQRDP-TEFLQ----GGVASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|333376196|ref|ZP_08467988.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
gi|332968931|gb|EGK07978.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
Length = 469
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 230/431 (53%), Gaps = 50/431 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G L+ + D L L P +P+ ++H+ Q+ MI +I N
Sbjct: 73 KIIKRANERGITIQELTEEFITAMNEDSDKLGVLRPDVEPKATEHIPQMIQMIEDLIANG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD+ KR+P DF LWKAAK EP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTNKRDPLDFVLWKAAKPEEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA----CQ- 175
W+SPWG GRPGWHIECSAM FDIHGGG DL FPHHENEIAQSC A C
Sbjct: 193 HWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQSCGAHNSSCNH 252
Query: 176 -------DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRS 228
S+V YW+HNG + +NEKMSKSLGNFFTIR + ++Y P +R F++ AHYRS
Sbjct: 253 NHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVLKKYQPEVVRFFILRAHYRS 312
Query: 229 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 288
PLNYS LD A +++ +Y TL + A E+ N+ +F A
Sbjct: 313 PLNYSDAHLDDAKNSLARLYNTLNNVAPAAFELTEN-------------TNEYTRKFFAA 359
Query: 289 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 348
M+DD T+ ++ F+ L + K L+ + +LG
Sbjct: 360 MNDDFGTAEAMSVLFE------------LANEANKHNSAEFAGCLKALGG-------MLG 400
Query: 349 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 408
LL + + D L E+ E LI +R AR+ K++++SD+IR L I
Sbjct: 401 LLQEEPQAFLQSGASDDGLSADEINE-----LIAQRKTARETKNWAESDRIRDVLAAHKI 455
Query: 409 ALMDMGKETIW 419
+ D T W
Sbjct: 456 IVKDSADGTTW 466
>gi|385852162|ref|YP_005898677.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
gi|325206985|gb|ADZ02438.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
Length = 473
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 233/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|303253060|ref|ZP_07339211.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247903|ref|ZP_07529938.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|302648092|gb|EFL78297.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306855594|gb|EFM87762.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
Length = 459
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 238/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D DL L P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS LNYS+ LD A
Sbjct: 253 YWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSLLNYSLDNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C++++ E + + F A M DD NT L
Sbjct: 313 RSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSE 357
F+ + +N LK + K L++ +KE+ +LGLL P A+
Sbjct: 358 VLFE-----VAREVNKLKTEDMAKANGLAV---------RLKELAGVLGLLYQDPEAF-- 401
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
LQ D E+ E + LI++R A+ K+++ +D++R L I L D T
Sbjct: 402 -LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|421907821|ref|ZP_16337690.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
gi|393291136|emb|CCI73697.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
Length = 699
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 177/438 (40%), Positives = 236/438 (53%), Gaps = 58/438 (13%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 299 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 358
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 359 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 418
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 419 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 478
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 479 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 538
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 539 HYRSPLNYSDTHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NGYTRR 585
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 586 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 627
Query: 345 RILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 402
I+GLL P A+ L+ A L+ E++ LI +R AR +K++++SD+IR
Sbjct: 628 -IIGLLQRDPTAF------LQGGAASDG-LSNEEIEDLIAQRKQARADKNWAESDRIRDL 679
Query: 403 LTRKGIALMDMGKETIWR 420
L I L D T WR
Sbjct: 680 LNEHKIILEDNAGGTTWR 697
>gi|358450731|ref|ZP_09161184.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
gi|357225107|gb|EHJ03619.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
Length = 462
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 247/423 (58%), Gaps = 39/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+RRA++ GE L++R + D A L L P +PR + ++++I MI ++I
Sbjct: 73 KILRRADENGEPYDELTDRMIKAMHEDEARLGVLSPDEEPRATAYIDEIIAMIHKLIAGG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV+F+V+ +YG+LS ++LE+ AG RV V KR+PADFALWKAAKAGE
Sbjct: 133 HAYAADNGDVYFSVDSFDDYGKLSKKKLEDLLAGARVDVQEAKRSPADFALWKAAKAGEV 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQS A + V+
Sbjct: 193 SWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLLFPHHENEIAQSECATGHTFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSLGNFFTIR+I E+Y +R+FL+S+HYRS ++YS L A
Sbjct: 253 TWMHAGAIRVNKEKMSKSLGNFFTIREIMEKYPAEVVRYFLVSSHYRSQVDYSEENLAEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y L+ + P K A + + D + F M DD NT+
Sbjct: 313 GRTLTRLYHALR----GIVP----AKAADVPESEHD------ERFAEAMDDDFNTA---- 354
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
A+ +++ N + + + + E++ K+ IL L G +LQ
Sbjct: 355 ----GAIAVLHAVANEINQHRRDGR-----------EDDAKQSAAILVRL--GGVLGLLQ 397
Query: 361 QLKD---KALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q + +A EL+ ED+ +I+ RA ARK K+F+++D+IR +L KGI L D + T
Sbjct: 398 QDPEAFFQADTGGELSAEDIEAMIQARADARKAKNFAEADRIRDELLEKGIILDDSREGT 457
Query: 418 IWR 420
WR
Sbjct: 458 TWR 460
>gi|341926027|dbj|BAK53927.1| cysteinyl-tRNA synthetase [Chitiniphilus shinanonensis]
Length = 459
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 238/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ +L+ R+ D L L P ++PR ++ + + MI ++I+N
Sbjct: 73 KIIKRALENGESINALTQRFIDAMNEDADALGVLRPDHEPRATEFVGAMHQMIGRLIDNG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV K YG+LSG+ L++ RAGERV VD K++P DF LWKAAKA EP
Sbjct: 133 LAYSAPNGDVYYAVRKFDGYGKLSGKSLDDLRAGERVDVDPNKQDPLDFVLWKAAKADEP 192
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ WDSPWG GRPGWHIECSAMS H+L + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 ADAKWDSPWGAGRPGWHIECSAMSCHHLGAHFDIHGGGADLQFPHHENEIAQSEGASGQR 252
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG + +NEKMSKSLGNFFTIR++ ++Y +R F++ AHYRSPLNYS + L
Sbjct: 253 YVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLKKYDAEVVRFFILRAHYRSPLNYSDMHL 312
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A +A+ +Y L K + D + F A M DD NT+
Sbjct: 313 DDARNALTRLYTAL--------------KAVPADAVTLDWQSPYAARFKAAMDDDFNTTE 358
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F L + +QQ +L L+ + VL +LG P
Sbjct: 359 AVAVLFD------------LAHEANRQQSPALAGELKALAG----VLGLLGREP------ 396
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q + E + E + I R AAR K++++SD+IR +L G+ L D + T
Sbjct: 397 --QAFLQAEVGEGEWSAERIEAAIAARKAARAAKNWAESDRIRDELAAAGVVLEDGAQGT 454
Query: 418 IWR 420
WR
Sbjct: 455 GWR 457
>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 461
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 180/424 (42%), Positives = 241/424 (56%), Gaps = 43/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ GE +L+ R+ Q D L LPPT +PR + H+ +I M+ +I+
Sbjct: 73 KIIRRANENGEPFQALTERFIQAMREDSEALGVLPPTDEPRATAHIGEILAMVQTLIDKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV++AV + P+YG+LSG+ + RAG RV + KR+P DFALWKAAK GEP
Sbjct: 133 LAYVADNGDVYYAVSRFPDYGKLSGKDPADLRAGSRVEIGESKRDPLDFALWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS A + V+
Sbjct: 193 AWDSPWGPGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQSEGATGEPFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V N EKMSKSLGNFFT+R+I Y P +R+F++++HYRSPLNY L A
Sbjct: 253 VWMHNGFVRVNEEKMSKSLGNFFTVREILRLYRPEEVRYFILTSHYRSPLNYDDSALQKA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ A PA + R F A M DD NT L
Sbjct: 313 RAALTRLYTALRGLPEA-------------APAEGEA---FRARFQAAMDDDFNTPEALA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L+ Q +LR L GA +LQ
Sbjct: 357 VLFE-----LAREINRLRSDGSDQAAAH------------GALLREL-----GAALGLLQ 394
Query: 361 QLKDKALKRAE----LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
++ L+ ++ ++ +I +R AAR N+D++++D++R LT GI L D +
Sbjct: 395 DDPERYLRGGADADGPSDAEIEAMIAQRRAARANRDWAEADRLREALTAAGIVLEDGPQG 454
Query: 417 TIWR 420
T WR
Sbjct: 455 TTWR 458
>gi|416165303|ref|ZP_11607427.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|433474412|ref|ZP_20431764.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|433482842|ref|ZP_20440092.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|433484856|ref|ZP_20442070.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|433487087|ref|ZP_20444274.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|433537689|ref|ZP_20494180.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
gi|325127358|gb|EGC50293.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|432207068|gb|ELK63063.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|432213680|gb|ELK69591.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|432219093|gb|ELK74941.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|432220072|gb|ELK75899.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|432270438|gb|ELL25576.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
Length = 473
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ + L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|195953483|ref|YP_002121773.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|229558710|sp|B4U9I4.1|SYC_HYDS0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|195933095|gb|ACG57795.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 488
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 241/422 (57%), Gaps = 12/422 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN+ ++ +S++NRY Y +DM + P +PRV++HME+I +I+++I
Sbjct: 74 KIINKANEENKDFMSIANRYIARYYLDMEAINVKPANVEPRVTEHMEEIISLISKLIELG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GD++F+++ +YG+LS + E AG R+ +KRNP DFALWKA+K+ EP
Sbjct: 134 KAYESDGDIYFSIDSFKDYGKLSKRSPEELEAGARIEPSLKKRNPLDFALWKASKSHEPG 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPW GRPGWH EC AM +L DIH GGIDL+FPHHENEIAQ+ + Y
Sbjct: 194 WESPWSYGRPGWHTECVAMIFKHLGETIDIHAGGIDLVFPHHENEIAQAESITGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG VT +KMSKSLGNF T+++I +YHP LR ++ HYRSPL++S +++
Sbjct: 254 WMHNGLVTVGGKKMSKSLGNFVTLKEIYTKYHPDVLRLLVLFTHYRSPLDFSFEKMEETK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A + ++D E L + GK ++ +++F+ +S+D NTS +
Sbjct: 314 KAYERLKSAIEDIE-PLKAIAKEGKPV-VDIDFYSLEKSTQEQFYKALSEDFNTSLAIAH 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEVKEVLR-ILGLLPPGAYSEV 358
F + LN K + K ++ +E + N +K+ L+ I GLL
Sbjct: 372 IFNAV-----AELNKAKTESFKIGYITPKELEGYLFLANSLKQTLKDIFGLLEENTLQNT 426
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L+ L+ + ++ E + LI+ R A++NKDF +D IR +L GI L D TI
Sbjct: 427 LKTLEPAS--SVNISTEFLEILIKARNLAKENKDFKVADFIRDELLNYGIKLEDTKAGTI 484
Query: 419 WR 420
W+
Sbjct: 485 WK 486
>gi|406894538|gb|EKD39329.1| hypothetical protein ACD_75C00439G0007 [uncultured bacterium]
Length = 490
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 160/418 (38%), Positives = 234/418 (55%), Gaps = 6/418 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + + L+ R+ E+ VDM L P +P+ ++H+ ++ D+I +++
Sbjct: 74 KIIARAKEQQTSSEELAARFINEFYVDMDRLGINRPDIEPKATEHITEMIDLIGELVGKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY DV++ V+ P YG+LS + + +AG R++V+ +KRNP DF LWK +K GEP+
Sbjct: 134 KAYPSGNDVYYVVDSFPGYGKLSKRNPADMQAGARISVNEQKRNPMDFVLWKGSKPGEPT 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS A +
Sbjct: 194 WASPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQDLIFPHHENEIAQSEGANGKPFATT 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+G VT +EKMSKSLGNF TIR I YHP LR F+ S HYR+PL++S + A+
Sbjct: 254 WIHHGFVTIRDEKMSKSLGNFLTIRDILSHYHPEILRFFIFSTHYRNPLDFSESAMQDAT 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y+ L + S ++ + + + + F M +D NT+ G
Sbjct: 314 AGLERLYECLAAVDRLDSGKRDSALPSVLTENDLRQLKGMETRFQQAMDNDFNTAQA-QG 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K S+N + +K P I+ L+ ++++ I+G+L A + L
Sbjct: 373 VFFDTVK----SINRICRKLPATPSAGDIQFLKNGAETLRKLADIMGILREDA-NTFLAA 427
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
K+K + L + LI ER R K++++ D+IR L + I L D T W
Sbjct: 428 GKNKKISEGGLNVAAIETLIAERYECRLAKNWARGDEIRDLLLAQNIELKDGPAGTTW 485
>gi|303251228|ref|ZP_07337406.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307252540|ref|ZP_07534436.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302649770|gb|EFL79948.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306860132|gb|EFM92149.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 459
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 238/423 (56%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D DL + P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS LNYS+ LD A
Sbjct: 253 YWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSLLNYSLDNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C++++ E + + F A M DD NT L
Sbjct: 313 RSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSE 357
F+ I +N LK + K L++ +KE+ +LGLL P A+
Sbjct: 358 VLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLGLLYQDPEAF-- 401
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
LQ D E+ E + LI++R A+ K+++ +D++R L I L D T
Sbjct: 402 -LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|416214986|ref|ZP_11623197.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
gi|325143495|gb|EGC65816.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
Length = 473
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ + L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|190150242|ref|YP_001968767.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263581|ref|ZP_07545196.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|229558612|sp|B3GXR0.1|SYC_ACTP7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189915373|gb|ACE61625.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871224|gb|EFN02953.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 459
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 236/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D DL L P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNEMCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS LNYS+ LD A
Sbjct: 253 YWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSLLNYSLNNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C++++ E + + F A M DD NT L
Sbjct: 313 RSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ I +N LK + + + +KE+ +LGLL P A+
Sbjct: 358 VLFE-----IAREVNKLKTEDMAKAN--------GLAARLKELAGVLGLLYQDPEAF--- 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ D E+ E + LI++R A+ K+++ +D++R L I L D T
Sbjct: 402 LQGDADN----DEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|421560018|ref|ZP_16005883.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
gi|402334103|gb|EJU69397.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
Length = 473
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NGYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ + L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|78357164|ref|YP_388613.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
gi|109894898|sp|Q30ZH8.1|SYC_DESDG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78219569|gb|ABB38918.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
Length = 485
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 241/422 (57%), Gaps = 15/422 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G ++ +Y + DM L CL +PR + H+ ++ + +I+
Sbjct: 72 KIIKRAGETGLTSTEVAEKYMAAFHEDMDRLGCLRADIEPRCTQHIGEMIALCEDLISKG 131
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V +YG+LSG+ +++ R+G RVA K +P DFALWK+AK GEP
Sbjct: 132 KAYSTASGDVYFRVRSFASYGKLSGRDVDDMRSGARVAPGEEKEDPLDFALWKSAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAMS +L DIHGGG DL+FPHHENEIAQ+ AA
Sbjct: 192 YWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQTEAATGKEFAR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N EKMSKSLGNF TIR I + Y P LR+FL++ HYRSP++++ +D A
Sbjct: 252 YWVHNGFVQVNAEKMSKSLGNFSTIRDILQGYLPETLRYFLLTKHYRSPIDFTFDGMDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---FHARMSDDLNTSH 297
+ IYQTL E L + P E+ ++++ + ++ M DDLNT+
Sbjct: 312 EKNLRRIYQTLNLVENELQKTKWSAA-----PLPEEVLSEMDETERAWNEAMEDDLNTAA 366
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L F ++ +N + ++ Q + ++L ++++ + +LGL +E
Sbjct: 367 ALGHIF-GLVRLVNRIIEDKTMRKSAQAR----DALLRMQSMMARWGAVLGLFTRQP-AE 420
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
L++++D R ++ V L+ ER ARK KDF +SD IR +L R G+ + D
Sbjct: 421 FLREMRDCRAARRDVDTARVETLLLERQEARKAKDFERSDAIREELARMGVEVQDTPAGA 480
Query: 418 IW 419
W
Sbjct: 481 AW 482
>gi|255067745|ref|ZP_05319600.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
gi|255047956|gb|EET43420.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
Length = 483
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 236/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 83 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 142
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 143 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 202
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 203 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 262
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 263 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 322
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 323 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFELSENA-------------NDYTRR 369
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 370 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAYLAGCLKALGG------ 411
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E++ LI +R AR +K++++SD+IR L
Sbjct: 412 -IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIEDLIAQRKQARSDKNWAESDRIRDLLN 465
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 466 EHKIILEDNAGGTTWR 481
>gi|432328526|ref|YP_007246670.1| cysteinyl-tRNA synthetase [Aciduliprofundum sp. MAR08-339]
gi|432135235|gb|AGB04504.1| cysteinyl-tRNA synthetase [Aciduliprofundum sp. MAR08-339]
Length = 458
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 235/421 (55%), Gaps = 43/421 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN+LG++P+ +++ Y QEYL DM L+ P P+ + HME+I +++ +I
Sbjct: 75 KIINKANELGKDPIEMAHYYAQEYLKDMDSLRVRRPNIIPKATRHMEEIINLVKTLIEKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F+VEK NYG+LS +++E+ AG RV V +KRNP DFALWKAAK GEP
Sbjct: 135 YAYESGGDVYFSVEKFKNYGKLSHRKMEDMLAGARVEVSDKKRNPLDFALWKAAKPGEPH 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWGPGRPGWHIECSAMS YL S DIHGGG DLIFPHHENEIAQS AA Y
Sbjct: 195 WPSPWGPGRPGWHIECSAMSMTYLGSTLDIHGGGADLIFPHHENEIAQSEAATGKPFARY 254
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G V EKMSKS+GN F IR ++Y P LR +++HYR P ++S
Sbjct: 255 WMHVGLVRFEKEKMSKSIGNVFLIRDFLKKYPPEVLRLMYLNSHYRKPYDFSEKN----- 309
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFHARMSDDLNTSHI 298
I T+ E S +Q K+A A+E ++R+ + +SDD NT
Sbjct: 310 -----ITDTIPLLEKIWSTYQILKKSASGGDASEQTKMRIRNAKRSIISALSDDFNTRE- 363
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
A + L F+N + ++ P + + +E L +++ I LLP G +
Sbjct: 364 ---ALAEYLNFVNYAKDL---HGPDAR--AALEFLGEMD-------YIFDLLPRGTGGDK 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++L + L+E R R+ K++ +D IR L + GI + D + T
Sbjct: 409 EEKL--------------IGLLLEVRNEERRRKNYDIADYIREQLEKMGIKIEDTKEGTR 454
Query: 419 W 419
W
Sbjct: 455 W 455
>gi|389606841|emb|CCA45752.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha522]
Length = 699
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 233/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 299 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 358
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 359 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 418
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 419 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 478
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 479 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 538
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 539 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NDYTRR 585
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 586 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 627
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 628 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 681
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 682 EHKIILEDNAGGTTWR 697
>gi|52078589|ref|YP_077380.1| cysteinyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|404487458|ref|YP_006711564.1| cysteinyl-tRNA ligase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|61216165|sp|Q65PC8.1|SYC_BACLD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52001800|gb|AAU21742.1| cysteinyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52346452|gb|AAU39086.1| cysteinyl-tRNA ligase CysS [Bacillus licheniformis DSM 13 = ATCC
14580]
Length = 467
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 232/423 (54%), Gaps = 37/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE ++ R+ + Y D+ L C PRV+++M++I D I +I+
Sbjct: 74 KLIKAANELGEEVPVIAERFIKAYFEDVGSLGCTKADCHPRVTENMDEIIDFIQTLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV++ YG+LS Q ++ R+G R+ V +K + DF LWKAAK E S
Sbjct: 134 YAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVGEKKEDALDFTLWKAAKDNEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAFPHHENEIAQSEALTGKPFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I + + P LR F++S HYR P+NYSV L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKEHDPQVLRFFMLSVHYRHPINYSVELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDCINKL---RDEFHARMSDDLNTSH 297
+A + A S Q K++ + + + K+ R F M DD NT++
Sbjct: 314 NA-------FGRLKTAYSNLQHRLKSSTNLTEGDSEWLEKIEEQRKAFQTAMDDDFNTAN 366
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
++ F D K N L Q K +I++ ++ +E+ VL
Sbjct: 367 AISVLF-DLAKHANYYL------QEKNTAEHVIQAFIQLFDEICSVLGF----------- 408
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+LK EL ++D+ +LIE+R AR+N+DF+ SDQIR L I L D + T
Sbjct: 409 --------SLKEQELLDKDIEELIEKRNEARRNRDFATSDQIRDQLKSMNIILEDTPQGT 460
Query: 418 IWR 420
W+
Sbjct: 461 RWK 463
>gi|386742349|ref|YP_006215528.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
gi|384479042|gb|AFH92837.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
Length = 462
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 234/422 (55%), Gaps = 37/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E SL+ R E D L L P +PR + H+++I ++ +I
Sbjct: 73 KIIKRAAENNETVDSLTTRMLAEMHKDFDALNILRPDSEPRATQHIDEIIEITDLLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V+ NYG+LS Q LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEVADSKRNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + E Y P +R+FL+S HYRS LNY+ L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDPETVRYFLLSGHYRSQLNYTEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G + PA + K F M+DD NT +
Sbjct: 313 RTALERLYTALR------------GTDKSVAPAGGEIFKK---RFEDAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F A +N LK + + ++ +E++++ +LGLL P A+
Sbjct: 358 VLFDMA-----REINRLKSENKV--------AANELASELRKLAGVLGLLEQDPEAF--- 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L+ A + + LI++R ARKNK+++ +D R +LT GI L D + T
Sbjct: 402 ---LQGNAQGEGDEEVAKIEALIKQRNDARKNKEWALADAARDELTAMGIVLEDGAQGTT 458
Query: 419 WR 420
WR
Sbjct: 459 WR 460
>gi|50122074|ref|YP_051241.1| cysteinyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
gi|61216191|sp|Q6D2E4.1|SYC_ERWCT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49612600|emb|CAG76050.1| cysteinyl-RNA synthetase [Pectobacterium atrosepticum SCRI1043]
Length = 461
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 227/422 (53%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+ R E D L L P +PR + H+ I +M+ +I
Sbjct: 73 KIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADIIEMVETLITRR 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V+ + YG LS Q L+ RAG RV + KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSVDTASGYGVLSRQDLDQLRAGARVEITEVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 HWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + ++ + HG ++ FH M DD NT +
Sbjct: 313 RAALERLYIALRGTDPSV---EAHGG------------DEFEARFHDAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F A +N L K + Q L +LRK+ +LGLL P + +
Sbjct: 358 VLFDMA-----REVNRL-KAEDVQAANQLASTLRKLSG-------VLGLLEQDPEQFLQN 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q+ D +K E LI++R AR KD++ +DQ R L GI L D + TI
Sbjct: 405 GAQVNDDEVKEIE-------ALIQQRKDARATKDWALADQARDRLNEMGIVLEDGPQGTI 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|261400776|ref|ZP_05986901.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
gi|269209376|gb|EEZ75831.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
Length = 473
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/436 (39%), Positives = 241/436 (55%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ A + +N + N ++ +K +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------QLAGRLKALG 400
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 401 GIIGLLQ----RDPTEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDTAGGTTWR 471
>gi|433522782|ref|ZP_20479461.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
gi|432257297|gb|ELL12600.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
Length = 473
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 239/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ A + +N + N ++ +K +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------QLAGRLKALG 400
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ + L+ E++ LI R AR +K++++SD+IR L
Sbjct: 401 GIIGLLQRDP-TEFLQ----GGVASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|188026279|ref|ZP_02961521.2| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
gi|188022312|gb|EDU60352.1| cysteine--tRNA ligase [Providencia stuartii ATCC 25827]
Length = 494
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 234/422 (55%), Gaps = 37/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E SL+ R E D L L P +PR + H+++I ++ +I
Sbjct: 105 KIIKRAAENNETVDSLTTRMLAEMHKDFDALNILRPDSEPRATQHIDEIIEITDLLIKRG 164
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V+ NYG+LS Q LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 165 HAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEVADSKRNPMDFVLWKMSKEGEP 224
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 225 SWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVN 284
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + E Y P +R+FL+S HYRS LNY+ L A
Sbjct: 285 YWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDPETVRYFLLSGHYRSQLNYTEENLKQA 344
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G + PA + K F M+DD NT +
Sbjct: 345 RTALERLYTALR------------GTDKSVAPAGGEIFKK---RFEDAMNDDFNTPEAYS 389
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F A +N LK + + ++ +E++++ +LGLL P A+
Sbjct: 390 VLFDMA-----REINRLKSENKV--------AANELASELRKLAGVLGLLEQDPEAF--- 433
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L+ A + + LI++R ARKNK+++ +D R +LT GI L D + T
Sbjct: 434 ---LQGNAQGEGDEEVAKIEALIKQRNNARKNKEWALADAARDELTAMGIVLEDGAQGTT 490
Query: 419 WR 420
WR
Sbjct: 491 WR 492
>gi|407007122|gb|EKE22871.1| hypothetical protein ACD_6C00698G0001, partial [uncultured
bacterium]
Length = 354
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 221/377 (58%), Gaps = 29/377 (7%)
Query: 47 MEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRK 103
++Q++DMI ++N AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K
Sbjct: 1 IDQMQDMIGNLVNKGTAYPSNNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEK 60
Query: 104 RNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHH 163
++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHH
Sbjct: 61 KHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLTFPHH 120
Query: 164 ENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLIS 223
ENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTI + E++HP +R+F++S
Sbjct: 121 ENEIAQSEASTGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIHDVIEKFHPEVVRYFIVS 180
Query: 224 AHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD 283
+HYRSP+NYS + L A + + Y + + + + E +
Sbjct: 181 SHYRSPVNYSDVALKEAKNTLSRFYHSFKTYQAVYG-----------DHLIETLDEAFVE 229
Query: 284 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 343
F+ M DD NT + F+ IN LN K++ +Q +LR + N
Sbjct: 230 RFNTAMCDDFNTPEAIAVLFE-----INKELNRAVKEENAEQAAIYYATLRHLTN----- 279
Query: 344 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 403
ILGL+ + + +AL L+ E + LI++R A+K K+F+++D+IR L
Sbjct: 280 --ILGLVQQDVEEFLKSDIGQEALG---LSPEQIEDLIQQRQDAKKAKEFARADEIRQSL 334
Query: 404 TRKGIALMDMGKETIWR 420
+G+ L D + T+WR
Sbjct: 335 LDQGVVLEDTRQGTVWR 351
>gi|227329459|ref|ZP_03833483.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 461
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 179/426 (42%), Positives = 231/426 (54%), Gaps = 46/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+ R E D L L P +PR + H+ I +M+ +I
Sbjct: 73 KIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADIIEMVETLIARR 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A S V+
Sbjct: 193 HWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQSSCAHDGSYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTS 296
A+ +Y L+ + +++ HG DEF AR M DD NT
Sbjct: 313 RAALDRLYTALRGTDASVAA---HGG----------------DEFEARFREAMDDDFNTP 353
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGA 354
+ F A +N L K + Q L +LRK+ +LGLL P
Sbjct: 354 EAYSVLFDMA-----REVNRL-KTEDVQAANQLASALRKLSG-------VLGLLEQDPEQ 400
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ + Q+ D+ +K E LI++R AR KD++ +DQ R L GI L D
Sbjct: 401 FLQNGAQVDDEEVKEIE-------ALIQQRKDARAAKDWALADQARDRLNEMGIVLEDGP 453
Query: 415 KETIWR 420
+ TIWR
Sbjct: 454 QGTIWR 459
>gi|421863184|ref|ZP_16294884.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379306|emb|CBX22079.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 483
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/436 (39%), Positives = 241/436 (55%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 83 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 142
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 143 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 202
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 203 AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 262
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 263 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 322
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 323 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 369
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ A + +N + N ++ +K +
Sbjct: 370 FYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------QLAGRLKALG 410
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 411 GIIGLLQ----RDPTEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAESDRIRDLLN 465
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 466 EHKIILEDTAGGTTWR 481
>gi|261364077|ref|ZP_05976960.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
gi|288568121|gb|EFC89681.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
Length = 473
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 236/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKVLGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E++ LI +R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIDDLIAQRKQARADKNWAESDRIRNLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNADGTTWR 471
>gi|138893764|ref|YP_001124217.1| cysteinyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
gi|196251125|ref|ZP_03149804.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
gi|166200148|sp|A4IJG8.1|SYC_GEOTN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134265277|gb|ABO65472.1| Cysteine-tRNA ligase [Geobacillus thermodenitrificans NG80-2]
gi|196209366|gb|EDY04146.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
Length = 467
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 238/423 (56%), Gaps = 37/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR A +LGE+ +++ R+ + Y D+ L C PRV++++E I + I +I+
Sbjct: 75 KLIRAARELGESVPAIAERFIEAYFEDIEALGCKKADIHPRVTENIETIIEFIQALIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV++ K YG+LS Q ++ +AG R+ V +K +P DFALWKAAK GE S
Sbjct: 135 YAYEVDGDVYYRTRKFDGYGKLSHQSIDELQAGARIEVGEKKDDPLDFALWKAAKEGEIS 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 195 WDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKY 254
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ NNEKMSKSLGNF + I + P LR F++S HYR P+NYS L+SA
Sbjct: 255 WLHNGYLNINNEKMSKSLGNFVLVHDIIRQIDPQVLRFFMLSVHYRHPINYSEELLESAR 314
Query: 242 DAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINKLRD---EFHARMSDDLNTSH 297
+ L+ A Q G + + + +++L D F M DD NT++
Sbjct: 315 -------RGLERLRTAYGNLQHRLGASTNLTDNDGEWLSRLADIRASFIREMDDDFNTAN 367
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A K N L Q K ++I + + E ++++ +LGL
Sbjct: 368 GIAVLFELA-KQANLYL------QEKTTSENVIHAFLR---EFEQLMDVLGL-------- 409
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
LK+ EL +E++ LI +R ARKN+DF+ +D+IR +L K I L D + T
Sbjct: 410 --------TLKQEELLDEEIEALIRQRNEARKNRDFALADRIRDELKAKNIILEDTPQGT 461
Query: 418 IWR 420
W+
Sbjct: 462 RWK 464
>gi|365921978|ref|ZP_09446221.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
gi|364575078|gb|EHM52496.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
Length = 451
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 223/420 (53%), Gaps = 48/420 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE +L+ R+ D A L CLPP +PR +D + + +I +I
Sbjct: 75 KIIVRAAENGEPIAALTERFTAAMHEDEAALGCLPPDEEPRATDAVPGMIALIETLIKKG 134
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++AV P YG+L+ + L++ RAGER+AV+ K +P DF LWKAAK GEP
Sbjct: 135 HAYAADNGDVYYAVRSFPGYGKLANRSLDDLRAGERIAVNEAKNDPLDFVLWKAAKPGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECS MSA L FDIHGGG+DL FPHHE EIAQS AC +V+
Sbjct: 195 SWDSPWGQGRPGWHIECSVMSAAALGEHFDIHGGGMDLKFPHHECEIAQSEGACGHQHVN 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N+EKMSKSLGNFFT+R + + Y LR F++ +HYR PLNYS L A
Sbjct: 255 YWLHNGFVQINDEKMSKSLGNFFTVRDVLKHYDGETLRTFILGSHYRGPLNYSDTALAEA 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y L P TA + F M+DD+NT
Sbjct: 315 KKMLTRLYTALDK-----QPLDGALDTAAVAA------------FEEAMNDDINTPKAFA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D + INS + + L+ L G +LQ
Sbjct: 358 VLF-DLARRINSG-----------------------DAHLAATLKTL-----GGRLGILQ 388
Query: 361 QLKDKALK-RAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q LK L E + I ER AA+ KD++++D IR +L +GI L D T W
Sbjct: 389 QAPAVFLKGEGSLDEATITARIAERNAAKAAKDYARADAIRNELAAQGIILKDTAGGTEW 448
>gi|262039625|ref|ZP_06012919.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
gi|261746382|gb|EEY33927.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
Length = 505
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 244/426 (57%), Gaps = 29/426 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G +P ++ +Y Q + D L L +P+V+++M +I + I ++I N
Sbjct: 83 KIIKRANEEGISPKEVTEKYIQGFFEDTELLNILQDIKRPKVTENMPEIIETIEKLIENG 142
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++G+VFF V+K +YG+LS Q+++ G RV + K NP DFALWK K GEP
Sbjct: 143 YAYEIDGNVFFDVKKYEDYGKLSNQKIDELEIGARVDIMEIKNNPLDFALWKKKKEGEPY 202
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS A Y
Sbjct: 203 WDSPWGQGRPGWHIECSAMSKKYLGETFDIHGGGQDLIFPHHENEIAQSKCAYHGHFAKY 262
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N +KMSKS GNFF +R+I ++ +R F++S HYR P+N+S +++
Sbjct: 263 WVHNGFVQVNGDKMSKSTGNFFLLREILGKFSGNVIRLFILSTHYRKPVNFSFEDMENTK 322
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE--------FHARMSDDL 293
+ + +++ E +L K+ ++ + INK+ E F M +D+
Sbjct: 323 KTLQNVISSIRRFEKSLEKLSSGIKSEDVSDEKINEINKVFKEKIKSFDVKFIGAMDEDM 382
Query: 294 NTSHILTGAFQDALKFINSSLNMLKK---KQPKQQQLSLIESL----RKIENEVKEVLRI 346
NT L+ F D ++ N + ++K K+ L E+L + ++ ++++VL +
Sbjct: 383 NTPQALSTIF-DQIRETNRFCDDIEKILDKERNDSSFLLFEALELSYKNLKTKIEDVLGV 441
Query: 347 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 406
L + +K + +L++ + LI+ R ARK K+FS SD+IR +L +
Sbjct: 442 L-------------LMDEKKENKDDLSKNLIELLIKIRTEARKEKNFSLSDEIRDELKKI 488
Query: 407 GIALMD 412
G+ + D
Sbjct: 489 GVEIKD 494
>gi|330830124|ref|YP_004393076.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|423209170|ref|ZP_17195724.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
gi|328805260|gb|AEB50459.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|404619015|gb|EKB15935.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
Length = 458
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 234/422 (55%), Gaps = 41/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + L+ R + D L + P +PR + H+E+I +++ ++ +
Sbjct: 73 KIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEIIELVQSLLEKE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D VA + + + AR A M DD NT +
Sbjct: 313 RAALERMYTALRDLPVAAAAGGDE-QVARFKEA---------------MDDDFNTPEAYS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN +K + +L LR++ GA +LQ
Sbjct: 357 ALF-DLVREINR-----QKAEDMVVAAALGARLREL----------------GAVLGILQ 394
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + LK E EE ++ +LI ER AR +K+++ +D R LT GI L D +T
Sbjct: 395 QDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLEDSAGKTS 454
Query: 419 WR 420
WR
Sbjct: 455 WR 456
>gi|383191176|ref|YP_005201304.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371589434|gb|AEX53164.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 463
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 234/421 (55%), Gaps = 34/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE ++L++R E D A L LPP +PR + H+ +I D++ +I+ D
Sbjct: 73 KIIKRAAENGETFMALTDRMIGEMHADFAALNILPPDSEPRATQHIHEIIDIVQTLIDRD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPADFALWKAAKAGE 119
AYV GDV F VE P+YG LS Q L+ +AG RV V++ KRNP DF LWK +K GE
Sbjct: 133 HAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVEANVKRNPMDFVLWKMSKPGE 192
Query: 120 PSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNV 179
PSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V
Sbjct: 193 PSWTSPWGKGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYV 252
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
+ WMH+G V + EKMSKSL NFFT+R + + Y ++R+FL+S HYRS LNYS L
Sbjct: 253 NTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLMSGHYRSQLNYSEENLKL 312
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A ++ +Y L+ + A +P R F A M DD NT
Sbjct: 313 ARTSMERLYTALRGTDAAATPAGGEAFVTR---------------FRAAMDDDFNTPEAY 357
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F D + IN + K + LS L E++++ +LGLL +
Sbjct: 358 SVLF-DMARDIN---------RLKTEDLSAANGLAA---ELRQLAGVLGLLE----QDPE 400
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q LK A + ++ LI++R AR +KD+ +D+ R L GI L D T W
Sbjct: 401 QFLKSGAQADNDDEVAEIEALIKQRNDARASKDWGMADKARDRLNEMGIVLEDGPAGTTW 460
Query: 420 R 420
R
Sbjct: 461 R 461
>gi|258544752|ref|ZP_05704986.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258520023|gb|EEV88882.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 473
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 229/423 (54%), Gaps = 50/423 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ GE +L+ R+ D A L C P +PR + + + +++ +I
Sbjct: 95 KIIARAHENGEPIDALTARFITAMHEDEAALGCQRPDVEPRATAAVSGMIELVQTLIAKG 154
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++AV P YG+L+ + L++ RAGER+AV+ K++P DF LWKAAK GEP
Sbjct: 155 HAYAADNGDVYYAVRSFPAYGKLANRSLDDLRAGERIAVNEAKKDPLDFVLWKAAKPGEP 214
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWG GRPGWHIECS M A L FDIHGGG+DL FPHHE EIAQS AC +V+
Sbjct: 215 AWDSPWGKGRPGWHIECSVMGAETLGEHFDIHGGGMDLKFPHHECEIAQSEGACGHPHVN 274
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V +NEKMSKSLGNFFT+R + ++Y LR F++S+HYR PLNYS LD A
Sbjct: 275 YWIHNGFVQIDNEKMSKSLGNFFTVRDVLKKYDGETLRAFILSSHYRGPLNYSDAALDEA 334
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L PA F M+DD NT
Sbjct: 335 KKALTRLYSALDKA-----------------PADGAMDADAVAAFDEAMNDDFNTPKAFA 377
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D + +NS + +L +L+ + LGL LQ
Sbjct: 378 VLF-DLARRLNSG------------ETALAATLKTLSGR-------LGL---------LQ 408
Query: 361 QLKDKALK---RAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q LK L+E D+L I RA A+ KD++++D IRA+L +GI + D
Sbjct: 409 QNPADWLKGENSGSLSEADILARIHARAEAKAAKDYARADAIRAELAAQGIIIKDTAGGV 468
Query: 418 IWR 420
WR
Sbjct: 469 EWR 471
>gi|307245827|ref|ZP_07527913.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307254800|ref|ZP_07536627.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259241|ref|ZP_07540971.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306853529|gb|EFM85748.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306862326|gb|EFM94293.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866908|gb|EFM98766.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 459
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 237/421 (56%), Gaps = 38/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D DL + P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS LNYS+ LD A
Sbjct: 253 YWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSLLNYSLNNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C++++ E + + F A M DD NT L
Sbjct: 313 RSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ I +N LK + K L++ +KE+ +LGLL Y +
Sbjct: 358 VLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLGLL----YQDPE 399
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
L+ A E+ E + LI++R A+ K+++ +D++R L I L D T W
Sbjct: 400 AFLQGDA-NNDEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTTW 456
Query: 420 R 420
R
Sbjct: 457 R 457
>gi|85713337|ref|ZP_01044354.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
gi|85692839|gb|EAQ30820.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
Length = 460
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/420 (42%), Positives = 235/420 (55%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE +L+ RY E D A L L P +PRV+ HM+ I MI ++
Sbjct: 74 KIIKRAAENGEPFDALTQRYIDEMHRDFAALNLLEPDVEPRVTQHMDDIIRMIESLVTQG 133
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV F V +YGRLS Q LE +AG RV V++ K +P DF LWK AKAGEP
Sbjct: 134 YAYQADNGDVLFDVSTFDDYGRLSRQNLEQLQAGARVDVEASKLDPLDFVLWKKAKAGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAM+ +L FDIHGGG DL FPHHENEIAQSC A Q + V+
Sbjct: 194 SWDSPWGEGRPGWHIECSAMNKAHLGETFDIHGGGSDLTFPHHENEIAQSCCANQTNYVN 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V ++ KMSKSLGNFFTIR + Y +R+FL+S+HYRS LNY+ L+ A
Sbjct: 254 YWMHSGMVQVDDVKMSKSLGNFFTIRDVLNAYDAETVRYFLLSSHYRSQLNYTQDNLEQA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ L+P Q E+ ++F M+DD N ++
Sbjct: 314 HAALERLYTALR----GLTPEQPD----------ENLRLPYWNQFTDAMNDDFNAPEAMS 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ ++ IN + + + QL+ + + E+ +LGLL S LQ
Sbjct: 360 VLFE-LVREINKARD---NDAERAAQLAHV---------LVELADVLGLLQQSPES-FLQ 405
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D + E LI +R AR KD++ +D+ R LT GI L D T WR
Sbjct: 406 GGADDEVALIE-------ALIAQRNKARAEKDWAAADEARDRLTEMGIVLEDGANGTQWR 458
>gi|319649137|ref|ZP_08003345.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
gi|317388837|gb|EFV69656.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
Length = 463
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 232/423 (54%), Gaps = 37/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE ++ R+ + Y D+ L C PRV+++M++I D I +I+
Sbjct: 70 KLIKAANELGEEVPVIAERFIKAYFEDVGSLGCTKADCHPRVTENMDEIIDFIQTLIDKG 129
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV++ YG+LS Q ++ R+G R+ V +K + DF LWKAAK E S
Sbjct: 130 YAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVGEKKEDALDFTLWKAAKDNEIS 189
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 190 WDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAFPHHENEIAQSEALTGKPFAKY 249
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I + + P LR F++S HYR P+NYSV L++
Sbjct: 250 WLHNGYINIDNEKMSKSLGNFVLVHDIIKEHDPQVLRFFMLSVHYRHPINYSVELLENTK 309
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDCINKL---RDEFHARMSDDLNTSH 297
+A + A S Q K++ + + + K+ R F M DD NT++
Sbjct: 310 NA-------FGRLKTAYSNLQHRLKSSTNLTEGDSEWLEKIEEQRKAFQTAMDDDFNTAN 362
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
++ F D K N L Q K +I++ ++ +E+ VL
Sbjct: 363 AISVLF-DLAKHANYYL------QEKNTAEHVIQAFIQLFDEICSVLGF----------- 404
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+LK EL ++D+ +LIE+R AR+N+DF+ SDQIR L I L D + T
Sbjct: 405 --------SLKEQELLDKDIEELIEKRNEARRNRDFATSDQIRDQLKSMNIILEDTPQGT 456
Query: 418 IWR 420
W+
Sbjct: 457 RWK 459
>gi|145636711|ref|ZP_01792377.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
gi|145270009|gb|EDK09946.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
Length = 459
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 235/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWSSPWGTGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVAF-----------GGENFVATFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + +E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD+S +D R +LT GI L D T
Sbjct: 396 QEPEKFLQAGSDDDEVAKIEALIKQRNEARVAKDWSAADSARNELTAMGIVLEDGANGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|402312548|ref|ZP_10831472.1| cysteine--tRNA ligase [Lachnospiraceae bacterium ICM7]
gi|400369006|gb|EJP22009.1| cysteine--tRNA ligase [Lachnospiraceae bacterium ICM7]
Length = 469
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/426 (38%), Positives = 246/426 (57%), Gaps = 37/426 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +A + G + +S RY E DM + LP T P ++ + +++MI+ +I+N
Sbjct: 72 KIINKAIEEGVDASVISTRYINECKKDMEAMNVLPATKNPLATEEIGGMEEMISTLIDNG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKA 117
AYV +G V+F V+ YG+LS + ++ ++G R V + K + DF LWK K
Sbjct: 132 HAYVAKDGTVYFRVKSFDGYGKLSHKNIDELQSGFREIKVTGEDGKEDSNDFVLWKPKKD 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP WDSPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENEIAQS +A S
Sbjct: 192 GEPYWDSPWSKGRPGWHIECSVMSKKYLGDQIDIHGGGEDLIFPHHENEIAQSESASGKS 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
+YWMHN + +N+KMSKSLGNFFT+R I+E+Y LR F++SAHYRSPLN+S +
Sbjct: 252 FANYWMHNAFLNIDNKKMSKSLGNFFTVRDISEKYDLQVLRFFMLSAHYRSPLNFSAELM 311
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHARMSDDLN 294
+++ +++ I +++ L Q+ ++ I A + L+D+F A M DD N
Sbjct: 312 EASKNSLERILTGVEN----LKDVQKKNNSSPITDAELSNLEMAKVLKDKFVAAMDDDFN 367
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T+ ++ F+ +K N+SLN + S +E + N ++ + +LG++
Sbjct: 368 TADAISAIFE-LIKLSNTSLN----------ENSTLEYANGLLNIIEPLCDVLGIITE-- 414
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
++ E+ + ++ LIE+R ARKNKDF+ +D+IR DL +GI L D
Sbjct: 415 -------------RKTEILDSEIEDLIEQRTQARKNKDFALADKIRNDLLDRGIVLEDTR 461
Query: 415 KETIWR 420
+ W+
Sbjct: 462 EGVKWK 467
>gi|385341075|ref|YP_005894946.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|416175060|ref|ZP_11609368.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|416189388|ref|ZP_11615301.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|433489259|ref|ZP_20446405.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
gi|325129292|gb|EGC52130.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|325135312|gb|EGC57933.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|325201281|gb|ADY96735.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|432220189|gb|ELK76014.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
Length = 473
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NGYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPIEFLQGGAASDG-LSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|307250157|ref|ZP_07532117.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857822|gb|EFM89918.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 459
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 237/421 (56%), Gaps = 38/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D DL + P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS LNYS+ LD A
Sbjct: 253 YWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSLLNYSLDNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C++++ E + + F A M DD NT L
Sbjct: 313 RSALERLYTSLRGCDLSVEV-----------AGGEQYV----EAFKAAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ I +N LK + K L++ +KE+ +LGLL Y +
Sbjct: 358 VLFE-----IAREVNKLKTEGMAKANGLAV---------RLKELAGVLGLL----YQDPE 399
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
L+ A E+ E + LI++R A+ K+++ +D++R L I L D T W
Sbjct: 400 AFLQGDA-NNDEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTTW 456
Query: 420 R 420
R
Sbjct: 457 R 457
>gi|433654077|ref|YP_007297785.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292266|gb|AGB18088.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 464
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/419 (37%), Positives = 244/419 (58%), Gaps = 28/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+R+++ L++RY +EY D L T PR +++++ I + + ++I+
Sbjct: 72 KLIKRSHEENTTVKELADRYIEEYFKDADSLGIKRATVHPRATENIDDIINFVKKLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ GDV++ K YG+LS + ++ +AG R+ V+ K+NP DF LWKAAK GEP
Sbjct: 132 FAYVLNGDVYYDTTKFKEYGKLSHKNIDELKAGARIEVNEDKKNPTDFVLWKAAKEGEPY 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS AA +
Sbjct: 192 WDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEAANDAEFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G++ NNEKMSKS NFFT+R IT +Y P LR F++++HYR+P+N+S L+ +
Sbjct: 252 WMHIGYLNINNEKMSKSKNNFFTVRDITSQYDPEVLRFFMLTSHYRNPINFSHDLLEQSK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ T+ + L + + + A ++ ++ + F M DD NT+ ++
Sbjct: 312 SGFLRLSNTVDNLRHLLDDALDR-ELSDEEKAYKEKYDEYKKRFEEAMDDDFNTADAISV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ ++ IN++++ PK+ LIE + I ++ VL I
Sbjct: 371 LFE-MVRDINTNID---GNSPKE----LIEYILDIFLKLSSVLGI--------------- 407
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ K+ +L ++++ +LIE+R ARK K+++++D+IR +L ++GIAL D W+
Sbjct: 408 ----SYKKRDLLDDEIKKLIEKREEARKAKNWAEADKIRDELKKQGIALEDTPSGVRWK 462
>gi|402570816|ref|YP_006620159.1| cysteinyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
gi|402252013|gb|AFQ42288.1| cysteinyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
Length = 452
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 246/425 (57%), Gaps = 30/425 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R N G +PL+L +Y EY D +L LP T P+ ++H+ ++ ++I +I++
Sbjct: 49 KIIQRGNVEGMDPLALGQKYIDEYFKDAKELNLLPATVHPKATEHIPEMIEIIQGLIDSG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
Y VEGDV+FAV+ P+YG+LSG+ L++ +AG RV VD RKR+P DFALWK AK GEP+
Sbjct: 109 LGYEVEGDVYFAVDHFPDYGKLSGRTLDDMKAGARVEVDERKRHPMDFALWKKAKPGEPA 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
W+SPWG GRPGWHIEC+AMS YL + FDIHGGG DL FPHHENEIAQ+ + +
Sbjct: 169 WESPWGEGRPGWHIECTAMSLKYLGAGFDIHGGGEDLSFPHHENEIAQTEGYLKGKTFAR 228
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+WMHN +T N EKMSKSLGNFFTIR++ +R +L+ HYRSPL+++ L A
Sbjct: 229 HWMHNAFLTINQEKMSKSLGNFFTIRELLVNSPGEVIRFYLLGTHYRSPLDFNDQNLIMA 288
Query: 241 SDAVFYIYQTLQDCEVALS---PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
+ + +++ + AL+ + + ++ A+++ R+ F M DD N++
Sbjct: 289 QKGLERLQTSVRLAQEALAREGAVKNDQGSLELSRASKEA----REAFEKAMDDDFNSAL 344
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG--LLPPGAY 355
F+ + ++N L + P E L + N + ++ +LG LL P
Sbjct: 345 AYAALFE-----LAKTMNGLVQANPVPS-----EGLAEAHNTLVKLGDVLGFDLLHPAKI 394
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
++ E+ E + +++ R+ +R+ KD+ +D IR L KGI + D +
Sbjct: 395 D----------VENNEILNEVMEVVLQIRSKSRQKKDWEMADFIRDGLKEKGIVIEDTPQ 444
Query: 416 ETIWR 420
W+
Sbjct: 445 GARWQ 449
>gi|288554704|ref|YP_003426639.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
gi|288545864|gb|ADC49747.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
Length = 465
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/419 (37%), Positives = 237/419 (56%), Gaps = 29/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR A++LGE+ +++NR+ +EY D L PRV++ + +I + + ++I +
Sbjct: 74 KIIRAAHELGEDVFAVANRFIEEYHNDTCALGVKKANKHPRVTETIPEIIEFVAKLIEKE 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F +K YG+LS Q +++ R+G R+ VD RK +P DF LWKAAK GE S
Sbjct: 134 YAYESGGDVYFRTKKFEGYGKLSSQSIDDLRSGARIEVDERKEDPLDFVLWKAAKEGEVS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM YL DIH GG DL FPHHENEIAQS A + +Y
Sbjct: 194 WESPWGDGRPGWHIECSAMVKKYLGDTIDIHAGGKDLSFPHHENEIAQSEALTGKTMANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + NNEKMSKSLGNF I ++ +R F+++AHYRSP+N+S LD A
Sbjct: 254 WMHNGFININNEKMSKSLGNFVLAHDIIRQHSAEVVRFFMLTAHYRSPINFSDELLDGAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + + + E L ++G+ A I++L++ F M DD N+++ +
Sbjct: 314 NGLERLRTAVSSLEHRLGESADYGEKAEWLTK----ISQLKEAFIKEMDDDFNSANGIAV 369
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D K N L + +Q ++ + + +E+ +VL I+
Sbjct: 370 MF-DLAKEANRYL------REEQTSKEVLHAFIDLFDELADVLGIV-------------- 408
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+AEL + ++ LIEER R++++F ++D+IR L +GI L D + W+
Sbjct: 409 ----VRTQAELLDTEIEALIEERNETRRSRNFKRADEIRDQLKDQGILLEDTAQGVRWK 463
>gi|418289253|ref|ZP_12901614.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
gi|372199990|gb|EHP14134.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
Length = 473
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NGYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ + L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|167837113|ref|ZP_02463996.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|424903636|ref|ZP_18327149.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|390931509|gb|EIP88910.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
Length = 465
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/424 (41%), Positives = 245/424 (57%), Gaps = 40/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE SL++R+ + VD L P +PR +D + Q+ MI ++ N
Sbjct: 75 KIIRRAVENGETIQSLTSRFTRAMNVDFDALGVERPDIEPRATDFIPQMLGMIEKLEANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V K NYG+LSG+ LE+ RAGERVA + K +P DF LWK AK +P
Sbjct: 135 YAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERVAANDAKEDPLDFVLWKRAKPQDP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
SW+S +G GRPGWHIECSAM L FDIHGGG DL FPHHENEIAQS A +
Sbjct: 195 AGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENEIAQSEGATGQT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V ++EKMSKSLGNFFTIR++ E++ +R F++ HYRSPLNYS + L
Sbjct: 255 FVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIVRTHYRSPLNYSDVHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A ++ +Y L+D ++P AR F A M+DD NT+
Sbjct: 315 DDARASLTRLYTALKDATPDVAPLDWSEAHAR--------------RFAAAMNDDFNTAV 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ + + +N + ++P +L L+++ VL +LG P E
Sbjct: 361 AVAVLFE-----LATEVN--RTREP-----ALARQLKRLAG----VLGLLGREP----RE 400
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKE 416
LQQ A + L E++ I R AA++ K+++++D+IRA+L GIAL D G
Sbjct: 401 FLQQAA-GAARAGALEPEEIEAKIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGS 459
Query: 417 TIWR 420
T WR
Sbjct: 460 TEWR 463
>gi|385329332|ref|YP_005883635.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
gi|308390183|gb|ADO32503.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
Length = 699
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 233/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 299 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 358
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 359 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 418
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 419 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 478
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 479 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 538
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 539 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NGYTRR 585
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 586 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 627
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 628 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 681
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 682 EHKIILEDNAGGTTWR 697
>gi|322514668|ref|ZP_08067696.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119366|gb|EFX91475.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 459
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 238/421 (56%), Gaps = 38/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D DL L P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + DV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K GEP
Sbjct: 133 HAYVAADDDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHSGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T ++EKMSKSLGNFFTIR + E+Y LR+F ++AHYRS LNYS+ LD A
Sbjct: 253 YWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFLTAHYRSLLNYSLDNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C++++ Q G + + F A M DD NT L
Sbjct: 313 RSALERLYTSLRGCDLSV---QVAGSEQYV------------EAFKAAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ I +N LK + K L++ +KE+ +LGLL Y +
Sbjct: 358 VLFE-----IAREVNKLKTEDMAKANGLAV---------RLKELAGVLGLL----YQDPE 399
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
L+ A E+ E + LI++R A+ K+++ +D++R L I L D T+W
Sbjct: 400 AFLQGDA-NNDEVAE--IEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTMW 456
Query: 420 R 420
R
Sbjct: 457 R 457
>gi|433476514|ref|ZP_20433845.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|433516605|ref|ZP_20473363.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|433518715|ref|ZP_20475449.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|433524927|ref|ZP_20481579.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|433529189|ref|ZP_20485794.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|433531364|ref|ZP_20487941.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|433533398|ref|ZP_20489954.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|433535558|ref|ZP_20492083.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
gi|432207372|gb|ELK63362.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|432250791|gb|ELL06171.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|432250876|gb|ELL06253.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|432257429|gb|ELL12729.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|432263543|gb|ELL18760.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|432263814|gb|ELL19025.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|432264712|gb|ELL19911.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|432269148|gb|ELL24311.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
Length = 473
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 238/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ + +N Q + +K +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFE-----LAGEVNKTNDAQ--------------LAGRLKALG 400
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 401 GIIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|404483021|ref|ZP_11018246.1| cysteine-tRNA ligase [Clostridiales bacterium OBRC5-5]
gi|404344111|gb|EJZ70470.1| cysteine-tRNA ligase [Clostridiales bacterium OBRC5-5]
Length = 492
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/426 (38%), Positives = 245/426 (57%), Gaps = 37/426 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +A + G + +S RY E DM + LP T P ++ + +++MI+ +I N
Sbjct: 95 KIINKAIEEGVDASVISTRYINECKKDMEAMNVLPATKNPLATEEIGGMEEMISTLIENG 154
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKA 117
AYV +G V+F V+ YG+LS + ++ ++G R V + K + DF LWK K
Sbjct: 155 HAYVAKDGTVYFRVKSFDGYGKLSHKNIDELQSGFREIKVTGEDGKEDSNDFVLWKPKKD 214
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP WDSPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENEIAQS +A S
Sbjct: 215 GEPYWDSPWSKGRPGWHIECSVMSKKYLGDQIDIHGGGEDLIFPHHENEIAQSESASGKS 274
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
+YWMHN + +N+KMSKSLGNFFT+R I+E+Y LR F++SAHYRSPLN+S +
Sbjct: 275 FANYWMHNAFLNIDNKKMSKSLGNFFTVRDISEKYDLQVLRFFMLSAHYRSPLNFSAELM 334
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHARMSDDLN 294
+++ +++ I +++ L Q+ ++ I A + L+D+F A M DD N
Sbjct: 335 EASKNSLERILTGVEN----LKDVQKKNNSSPITDAELSNLEMAKVLKDKFVAAMDDDFN 390
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T+ ++ F+ +K N+SLN + S +E + N ++ + +LG++
Sbjct: 391 TADAISAIFE-LIKLSNTSLN----------ENSTLEYANGLLNIIEPLCDVLGIITE-- 437
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
++ E+ + ++ LIE+R ARKNKDF+ +D+IR DL +GI L D
Sbjct: 438 -------------RKTEILDSEIEDLIEQRTQARKNKDFALADKIRNDLLDRGIVLEDTR 484
Query: 415 KETIWR 420
+ W+
Sbjct: 485 EGVKWK 490
>gi|227112835|ref|ZP_03826491.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 461
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 179/426 (42%), Positives = 230/426 (53%), Gaps = 46/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+ R E D L L P +PR + H+ I +M+ +I
Sbjct: 73 KIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADIIEMVETLIARR 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A S V+
Sbjct: 193 HWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQSSCAHDGSYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTS 296
A+ +Y L+ + +++ HG DEF AR M DD NT
Sbjct: 313 RAALDRLYTALRGTDASVAA---HGG----------------DEFEARFREAMDDDFNTP 353
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGA 354
+ F A +N L K + Q L +LRK+ +LGLL P
Sbjct: 354 EAYSVLFDMA-----REVNRL-KTEDVQAANQLASALRKLSG-------VLGLLEQDPEQ 400
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ + Q+ D +K E LI++R AR KD++ +DQ R L GI L D
Sbjct: 401 FLQNGAQVDDDEVKEIE-------ALIQQRKDARAAKDWALADQARDRLNEMGIVLEDGP 453
Query: 415 KETIWR 420
+ TIWR
Sbjct: 454 QGTIWR 459
>gi|268600169|ref|ZP_06134336.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268685235|ref|ZP_06152097.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
gi|268584300|gb|EEZ48976.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268625519|gb|EEZ57919.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
Length = 476
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 76 KIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 135
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 136 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 195
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 196 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 255
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 256 DHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 315
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 316 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NGYTRR 362
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 363 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 404
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 405 -IIGLLQ----RNPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAESDRIRDLLN 458
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 459 EHKIILEDSAGGTTWR 474
>gi|238027920|ref|YP_002912151.1| cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
gi|237877114|gb|ACR29447.1| Cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
Length = 464
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 239/429 (55%), Gaps = 51/429 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE SL++R+ D+ L P ++PR +D + Q+ MI + N
Sbjct: 75 KIIRRAVENGETIGSLTSRFIAAMHEDLDALGVARPEHEPRATDFVPQMLGMIETLEANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV K NYGRLSG+ L++ RAGERVA + K++P DF LWK+AK GEP
Sbjct: 135 YAYQASDGDVNYAVRKFANYGRLSGKSLDDLRAGERVAANDAKQDPLDFVLWKSAKPGEP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
SWDS +G GRPGWHIECSAM L FDIHGGG DL FPHHENEIAQS A ++
Sbjct: 195 ADTSWDSKYGRGRPGWHIECSAMGCTLLGHHFDIHGGGQDLQFPHHENEIAQSEGATGET 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V ++EKMSKSLGNFFTIR++ RY +R F++ HYRSPLNYS + L
Sbjct: 255 FVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLARYDAEVMRFFIVRTHYRSPLNYSEVHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR-----MSDD 292
D A ++ +Y L+D +P RDE HAR M+DD
Sbjct: 315 DDARASLTRLYTALKDVTPDAAPLD-------------------RDEPHARRFAAAMNDD 355
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT+ ++ F+ A + +N + +Q KQ L R+ P
Sbjct: 356 FNTALAVSVLFELAGE-VNRTREPALARQLKQLGGLLGLLGRE----------------P 398
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
AY + AL+ + + I R AA++ K+++++D+IRA L G+AL D
Sbjct: 399 RAYLQQASGAASGALEAGAIEAQ-----IAARVAAKQAKNYAEADRIRAALLEAGVALED 453
Query: 413 M-GKETIWR 420
G T WR
Sbjct: 454 KPGGLTEWR 462
>gi|254492720|ref|ZP_05105891.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268595732|ref|ZP_06129899.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268597919|ref|ZP_06132086.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268600306|ref|ZP_06134473.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268602538|ref|ZP_06136705.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268681087|ref|ZP_06147949.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268685567|ref|ZP_06152429.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291044895|ref|ZP_06570604.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|293397970|ref|ZP_06642176.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
gi|226511760|gb|EEH61105.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268549121|gb|EEZ44539.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268551707|gb|EEZ46726.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268584437|gb|EEZ49113.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268586669|gb|EEZ51345.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268621371|gb|EEZ53771.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268625851|gb|EEZ58251.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291011789|gb|EFE03785.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|291611916|gb|EFF40985.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
Length = 476
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 76 KIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 135
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 136 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 195
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 196 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 255
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 256 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 315
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 316 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NGYTRR 362
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 363 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 404
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 405 -IIGLLQ----RNPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAESDRIRDLLN 458
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 459 EHKIILEDSAGGTTWR 474
>gi|406879047|gb|EKD27781.1| hypothetical protein ACD_79C00582G0003 [uncultured bacterium]
Length = 492
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/439 (38%), Positives = 244/439 (55%), Gaps = 45/439 (10%)
Query: 2 QIIRRA----NDLGENPLS----LSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDM 53
+II RA D NP LS R+ +E+L DM L LP + +P+ + H+++I DM
Sbjct: 74 KIINRAREQIQDFSTNPNKSCEILSTRFYKEFLDDMKALNLLPASIEPKATMHIKEIIDM 133
Query: 54 ITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWK 113
I +IN AY V+G+V+F + K NYG+LSG+ +E+ R+ D+ K+NP DFALWK
Sbjct: 134 IEGLINKGYAYNVDGNVYFNITKFLNYGKLSGRNIEDTELHSRIDQDANKKNPLDFALWK 193
Query: 114 AAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA 173
+P W+SP+G GRPGWHIECSAMS YL +FDIHGGG DLIFPHHENEIAQS A
Sbjct: 194 KHVNDDPYWESPFGKGRPGWHIECSAMSMKYLGEEFDIHGGGQDLIFPHHENEIAQSAAY 253
Query: 174 CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYS 233
YW+HNG +T N+EKMSKSL NF TIR++T Y+PL ++ +L+S HYRSPL+++
Sbjct: 254 SGKGFARYWIHNGFITVNHEKMSKSLKNFKTIRELTAVYNPLNIKFYLLSTHYRSPLDFN 313
Query: 234 VLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDL 293
+ + ++ +F I TL ++ L ++ D KL +F M DD+
Sbjct: 314 DNLIKNCAEGLFKIENTLSRAKLVLE-----------ESSSIDNTKKLPADFIDAMCDDI 362
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP-- 351
NT L+ F + L +K+ +++ SLI ++ L+ILGL P
Sbjct: 363 NTPKALSVIFNECTGLNKILEGNLPEKEAIKEKYSLIINM----------LQILGLEPEI 412
Query: 352 -----------PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 400
GA ++ +K LK +L E+ + +L+ R A+ K+F+ +D+IR
Sbjct: 413 EKMHVVPKKKWAGANEAIIALMK---LKPQKLNEDQISRLVSARGMAKIEKNFTLADEIR 469
Query: 401 ADLTRKGIALMDMGKETIW 419
L I + D W
Sbjct: 470 NYLKTLNIEIRDKADACHW 488
>gi|385325019|ref|YP_005879458.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
gi|261393406|emb|CAX51042.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
Length = 473
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 239/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ A + +N + N ++ +K +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFELAGE-VNKTNNA------------------QLAGRLKALG 400
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 401 GIIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|257126844|ref|YP_003164958.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
gi|257050783|gb|ACV39967.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
Length = 483
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 245/423 (57%), Gaps = 34/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II ++ + G + +S +Y + + D++ L L +P+V+++M ++ ++I ++I+N
Sbjct: 72 KIINKSMEEGTSASEVSEKYIKYFFEDISKLNILESVKRPKVTENMSEVIEIIQKLIDNG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F V+K +YG+LS Q++E G R+ V K+NP DFALWK K GEP
Sbjct: 132 FAYEKDGDVYFEVKKYKDYGKLSNQKIEELELGARIDVSEIKKNPVDFALWKKKKDGEPF 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL FDIHGGG DL+FPHHENEIAQS A + +Y
Sbjct: 192 WESPWGQGRPGWHIECSAMAKKYLGDTFDIHGGGQDLVFPHHENEIAQSKCAYHGNFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + N +KMSKSLGNFF +R+I E++ +R F++S HYR P+N+S ++
Sbjct: 252 WLHNGFIQINGDKMSKSLGNFFLLREILEKFSGNVIRLFILSTHYRKPINFSFENMEDTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ I +++ E + ++ N I++ +F M++D+NT L
Sbjct: 312 KALQNIIKSMNKFENIVEKYKNEKIENVKNSEFSQKIDEFDKKFEEAMAEDMNTPQALAT 371
Query: 302 AF---QDALKFINSSLNMLKKKQPKQQQLSLI--------ESLR-KIENEVKEVLRILGL 349
F ++ KFI+++ + + S I +SL+ KIEN + G+
Sbjct: 372 IFDQIRETNKFISTN----------ESEFSTIYYEIKKSYDSLKAKIEN-------VFGI 414
Query: 350 LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIA 409
EV +K++ + ELT++ + LI+ R+ AR K+F SD+IR +L G+
Sbjct: 415 AI-----EVENAVKEEDGENMELTKKLIELLIKLRSEARSEKNFKLSDEIRDELKVLGVE 469
Query: 410 LMD 412
+ D
Sbjct: 470 IKD 472
>gi|212703175|ref|ZP_03311303.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
gi|212673441|gb|EEB33924.1| cysteine--tRNA ligase [Desulfovibrio piger ATCC 29098]
Length = 483
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 247/423 (58%), Gaps = 19/423 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ + + Y + DM L + ++PR +++++Q++D+ +++I
Sbjct: 72 KIIRRANEEKRDWREVGQTYIDAFHEDMDRLNVVRADHEPRATEYIQQMQDLCSELIAQG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY V GDV+F V P YG+LSG+ L+ +AG RVA K++P DFALWKAAK GEP
Sbjct: 132 KAYAVPSGDVYFRVRAYPPYGKLSGRSLDELQAGARVAPGEEKQDPLDFALWKAAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAMS YL DIHGGG DLIFPHHENEIAQ+ AAC
Sbjct: 192 FWESPWGKGRPGWHIECSAMSKEYLP--LDIHGGGQDLIFPHHENEIAQTEAACSCQLAR 249
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+W+HNG V N EKMSKSLGNF TIR I Y P LR FL+ HYRSP++++ +D +
Sbjct: 250 FWVHNGFVQVNAEKMSKSLGNFKTIRDILASYLPETLRFFLLGKHYRSPIDFTADIMDES 309
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE----FHARMSDDLNTS 296
A+ IY+ C++ E K +++ A+ I K DE F+A + DD+NT+
Sbjct: 310 EKALQRIYE----CQLEAGKALERAKWKKVDLPAD--ILKEWDEHGQGFNAALDDDVNTA 363
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
L F ++ +N L K + + L+E + N+ L + G P +
Sbjct: 364 QALGHIFSQ-VRLVNRVLED-KALRAGEGARRLLEEFFERHNDWSAQLGLFGQDP----A 417
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
L L+D+ R + V L++ERAAAR KDF++SD++RA L G+A+ D +
Sbjct: 418 TFLLALRDQRAARLNIDVPRVQTLLDERAAARAAKDFARSDELRAALAELGVAVRDTVEG 477
Query: 417 TIW 419
+W
Sbjct: 478 QVW 480
>gi|417842975|ref|ZP_12489052.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
gi|341950209|gb|EGT76798.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
Length = 459
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 235/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVAF-----------GGENFVATFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + +E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD+S +D R +LT GI L D T
Sbjct: 396 QEPEKFLQAGSDDDEVAKIETLIKQRNEARAAKDWSAADAARNELTAMGIVLEDGANGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|256829728|ref|YP_003158456.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256578904|gb|ACU90040.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 485
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/423 (41%), Positives = 237/423 (56%), Gaps = 17/423 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G + S++ Y + DM L L +P+ ++H++++ ++ +I
Sbjct: 72 KIINRANREGTDFESIARSYIDAFYTDMDRLGILRADIEPKATEHIKEMIELCENLIAKK 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V +YG+LSG+ +E+ +G R+ K +P DFALWK AK GEP
Sbjct: 132 HAYSTPSGDVYFRVRSYADYGKLSGRNIEDLMSGARIEPGEEKEDPLDFALWKGAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWGPGRPGWHIECSAMS YL FDIHGGG DL FPHHENE AQ+ AA V
Sbjct: 192 SWPSPWGPGRPGWHIECSAMSERYLPLPFDIHGGGQDLAFPHHENERAQTEAATDKQFVR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N+EKMSKSL NF TIR I Y P LR FLI+ HYRSPL+Y+ L+ +
Sbjct: 252 YWVHNGFVQINSEKMSKSLNNFVTIRDILANYLPEVLRFFLITKHYRSPLDYTSDALEES 311
Query: 241 SDAV--FYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A+ Y+ +T + VA + + A I A K D M+DD+NT+
Sbjct: 312 ERALKRIYLTKTAAEAHVAGTKWTATPLPAEIVVEATALEAKWDDS----MADDMNTAAA 367
Query: 299 LTGAFQDALKFINSSL--NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
L F +K +N L LKK +Q +I K+ EVL + L+P S
Sbjct: 368 LGHVFV-LMKIVNRILEDKTLKK---SEQGRDMIRHALKLFERWGEVLGLF-LMPS---S 419
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ L QLK+ + R ++ + V ++ER AR KDF++SD IR +L G+ + D +
Sbjct: 420 DFLTQLKESRVLRRKIDTDLVQTKLQERKEARAAKDFARSDAIRDELLALGVTIQDTAQG 479
Query: 417 TIW 419
W
Sbjct: 480 VQW 482
>gi|342904069|ref|ZP_08725871.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|342904629|ref|ZP_08726428.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341953050|gb|EGT79564.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341954078|gb|EGT80572.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
Length = 459
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 235/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVAF-----------GGENFVETFRES----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + IE + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTED--------IEKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD+S +D R +LT GI L D T
Sbjct: 396 QEPEKFLQAGSNDDEVAKIEALIKQRNEARVAKDWSAADAARNELTAMGIVLEDGPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|304315919|ref|YP_003851064.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777421|gb|ADL67980.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 464
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/419 (37%), Positives = 244/419 (58%), Gaps = 28/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+R+++ L++RY +EY D L T PR +++++ I + + ++I+
Sbjct: 72 KLIKRSHEENTTVKELADRYIEEYFKDADSLGIKRATVHPRATENIDDIINFVKKLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ GDV++ K YG+LS + ++ +AG R+ V+ K+NP DF LWKAAK GEP
Sbjct: 132 FAYVLNGDVYYDTTKFKEYGKLSHKNIDELKAGARIEVNEDKKNPTDFVLWKAAKEGEPY 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS AA +
Sbjct: 192 WDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEAANDAEFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G++ NNEKMSKS NFFT+R IT +Y P LR F++++HYR+P+N+S L+ +
Sbjct: 252 WMHIGYLNINNEKMSKSKNNFFTVRDITSQYDPEVLRFFMLTSHYRNPINFSHDLLEQSK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ T+ + L + + + A ++ ++ + F M DD NT+ ++
Sbjct: 312 SGFLRLSNTVDNLRHLLDDALDR-ELSDEEKAYKEKYDEYKRRFEEAMDDDFNTADAISV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ ++ IN++++ PK+ LIE + I ++ VL I
Sbjct: 371 LFE-MVRDINTNID---GNSPKE----LIEYILDIFLKLSSVLGI--------------- 407
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ K+ +L ++++ +LIE+R ARK K+++++D+IR +L ++GIAL D W+
Sbjct: 408 ----SYKKRDLLDDEIKKLIEKREEARKAKNWAEADKIRDELKKQGIALEDTPSGVRWK 462
>gi|148244266|ref|YP_001218960.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
gi|146326093|dbj|BAF61236.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
Length = 462
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 238/421 (56%), Gaps = 35/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ +L+NR+ D L LPP +PR ++ MEQI MI +I
Sbjct: 73 KIIKRAVENKEDIYTLTNRFINAMHEDEHALGILPPDVEPRATNTMEQIFCMIKSLIEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+++V NYG+ S + L G R+ V+S K++P DF LWK +K EP
Sbjct: 133 FAYQAHNGDVYYSVRHFKNYGKFSRKNLNKLEIGARIKVESAKKDPLDFVLWKMSKPNEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS H+L + FDIHGGG+DL FPHHENEIAQS A + V+
Sbjct: 193 SWSSPWGKGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTFPHHENEIAQSEGANNCTFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V NN+KMSKSL NFFTIR + + Y+ LR+F++S+HY SPLN+S L+ A
Sbjct: 253 IWMHVGFVNINNKKMSKSLNNFFTIRNVLKNYNGEILRYFIMSSHYHSPLNFSDENLNKA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y T++ + + +T I+ + + F+ + DD NT L+
Sbjct: 313 KSSLSRLYTTIRGLNTS------NVRTEEISIHFDYSV-----RFNEALDDDFNTPIALS 361
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A K +N ++++ Q +L + L+K+ G Y +LQ
Sbjct: 362 VLFELA-KIVN-----IQRENNTDQAKTLAQLLKKL----------------GGYIGILQ 399
Query: 361 QLKDKALKRA-ELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
DK LK+ L++E + I R AR NKDF+ SD IR +L + I L D T W
Sbjct: 400 MNADKFLKQGISLSDEQINIKITNRNKARINKDFTLSDYIRDELAKFDIILEDNINGTTW 459
Query: 420 R 420
R
Sbjct: 460 R 460
>gi|405373480|ref|ZP_11028253.1| Cysteinyl-tRNA synthetase [Chondromyces apiculatus DSM 436]
gi|397087739|gb|EJJ18769.1| Cysteinyl-tRNA synthetase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 489
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/426 (40%), Positives = 249/426 (58%), Gaps = 26/426 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A + GE P++L+ R+ + + D L L P PRVSDH+ +I +I ++++
Sbjct: 77 KIIKAAAETGEAPVALAARFVELFREDAKALHLLEPDVAPRVSDHLPEIIAIIQKLVDKG 136
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+V +Y +LS + L++ G+RV +KR P DFALWKAAK GEP+
Sbjct: 137 HAYASQGDVYFSVSSDADYAKLSKRNLDDLCVGDRVQPGEQKREPLDFALWKAAKPGEPA 196
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMSA YL FDIHGG +DLIFPHHENEIAQS +A + Y
Sbjct: 197 WDSPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPHHENEIAQSESANGVTFARY 256
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + KMSKSLGN +R + P ALR F +S HYR PL +S L A
Sbjct: 257 WMHCGFLDLEGAKMSKSLGNVVRLRDALTKVDPEALRFFFLSTHYRHPLAFSDKALADAE 316
Query: 242 DAVFYIYQTLQ--DCEVALSPFQE---HGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
+ Y Y+TL+ D VA F + HG+ R EF + M DD N++
Sbjct: 317 ARMEYFYETLRKVDERVAGKDFGKGPLHGEPHR-----------FFGEFESAMDDDFNSA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGA 354
L +L + +N L K P + + + +L+ + +V+ V +LGL P A
Sbjct: 366 GGLG-----SLSGLFGMMNELADKPPVKDKALMGRTLQALREDVRRVSGVLGLFEDAPDA 420
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ L + +++A++ + DV +L+ ER AAR KDF+ +D++R++L +KG+ +MD
Sbjct: 421 W---LLRRRERAVRERGIDVADVERLLGERTAARAAKDFAAADRVRSELKQKGVEIMDTP 477
Query: 415 KETIWR 420
T W+
Sbjct: 478 AGTTWK 483
>gi|59802301|ref|YP_209013.1| hypothetical protein NGO1993 [Neisseria gonorrhoeae FA 1090]
gi|240013127|ref|ZP_04720040.1| CysS [Neisseria gonorrhoeae DGI18]
gi|240015570|ref|ZP_04722110.1| CysS [Neisseria gonorrhoeae FA6140]
gi|240120198|ref|ZP_04733160.1| CysS [Neisseria gonorrhoeae PID24-1]
gi|81311142|sp|Q5F5D6.1|SYC_NEIG1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|59719196|gb|AAW90601.1| putative cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
Length = 473
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NGYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RNPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDSAGGTTWR 471
>gi|237745445|ref|ZP_04575925.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
gi|229376796|gb|EEO26887.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
Length = 462
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 239/424 (56%), Gaps = 43/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE+ SL+ R+ Q D + L LPP ++PR ++++ ++ ++I ++ N
Sbjct: 75 KIINRAGENGESISSLTARFTQYMHEDTSALGILPPDHEPRATEYVPEMLELIAKLEKNG 134
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY E GDV ++V YG+LSG+ L++ RAGERV V++ KR+P DF LWK+AK EP
Sbjct: 135 LAYQSEDGDVNYSVRDFRGYGKLSGKSLDDLRAGERVDVNTGKRDPLDFVLWKSAKPSEP 194
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
W S WG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQS A
Sbjct: 195 DEAKWSSRWGAGRPGWHIECSAMSSKLLGDHFDIHGGGADLQFPHHENEIAQSEGASGHP 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR + + Y LR F+I +HYRSPLNYS L
Sbjct: 255 FVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKNYDAEVLRFFIIRSHYRSPLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A A+ +Y L+D +V P ++ E + F M+DD NT
Sbjct: 315 DDARSALTRLYTALKDIDVQDKP---------VDWQEEHAV-----RFSRAMNDDFNTPE 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ + + +N + Q +L L +E + ++ L+ G +
Sbjct: 361 AVAVLFE-----LANEVNRTHSVEVASQLKALGSVLGLLERDPRQFLQGNGTVD------ 409
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKE 416
E E+ + I+ R A+K +DF+K+D+IR +L KGI L D G +
Sbjct: 410 -------------ENEEKWIEAQIQARREAKKTRDFAKADKIRNELLEKGIVLEDKPGGK 456
Query: 417 TIWR 420
T WR
Sbjct: 457 TEWR 460
>gi|403071329|ref|ZP_10912661.1| cysteinyl-tRNA ligase [Oceanobacillus sp. Ndiop]
Length = 466
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 235/424 (55%), Gaps = 38/424 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A +LGE+ L++++ Q YL D+ L T+ PRV + M+ I I ++
Sbjct: 74 KIIKTARELGEDVPELADKFIQAYLEDVGALGVKKATHNPRVMETMDDIIAFIDALVQKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K +P DFALWK AK GE S
Sbjct: 134 FAYEAEGDVYFKPRAFNGYGKLSHQSIDELRSGARIQVGEKKNDPLDFALWKKAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL DIH GG DL FPHHENEIAQS A + +Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDTIDIHAGGQDLAFPHHENEIAQSEAMTGHTFANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF R + + P LR F++S HYR+P+N++ L+SA
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFVLTRDLVAHHDPQVLRFFMLSVHYRNPINFTEELLESAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
++ I + EH K + ++ + I+ L++ F A M DD NT+
Sbjct: 314 NSYDRIKTAYHNL--------EHRKQSSMDLINDTDVWIPLIDGLKNRFEAEMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L Q KQ ++I+ +K + +L++LG+
Sbjct: 366 NAISVLF-DLSKEANVYL------QSKQTSAAVIDHFQKT---IMTLLQVLGI------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ EL +E + LI ER ARKN+DF+++D+IR L + I L D +
Sbjct: 409 --------NLAETEELLDETIEALIVERNEARKNRDFARADEIRDLLKERAIILEDTPQG 460
Query: 417 TIWR 420
W+
Sbjct: 461 VRWK 464
>gi|194099737|ref|YP_002002872.1| protein CysS [Neisseria gonorrhoeae NCCP11945]
gi|385336681|ref|YP_005890628.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|193935027|gb|ACF30851.1| CysS [Neisseria gonorrhoeae NCCP11945]
gi|317165224|gb|ADV08765.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 475
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 75 KIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 135 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 195 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 254
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 255 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 314
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 315 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NGYTRR 361
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 362 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 403
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 404 -IIGLLQ----RNPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAESDRIRDLLN 457
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 458 EHKIILEDSAGGTTWR 473
>gi|348026620|ref|YP_004766425.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341822674|emb|CCC73598.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
Length = 481
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 238/425 (56%), Gaps = 25/425 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II AN G ++SNRY Y M L PRVS+HM++I M+ +I+
Sbjct: 75 KIINAANGEGVTWDTISNRYIASYFEVMDKLHIRRADKYPRVSEHMDEIIHMVQTLIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV++ DV+++VEK +YG LSG+ L++ AG R+ VD RK NP DFALWK AK GEPS
Sbjct: 135 YAYVIDHDVYYSVEKFNDYGELSGRSLDDMMAGARIEVDDRKHNPMDFALWKGAKPGEPS 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA-ACQDSNVS 180
WDSPWG GRPGWHIECSAMS YL FD HGGG DLIFPHHENEIAQS A + V
Sbjct: 195 WDSPWGKGRPGWHIECSAMSNKYLGDTFDFHGGGSDLIFPHHENEIAQSEAFTGKKPMVK 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG +T N+EKMSKSL NFF ++ + E Y P ALR FLIS HYRSPL++S +L+
Sbjct: 255 YWLHNGFITINSEKMSKSLNNFFLVKDVLEHYSPDALRFFLISNHYRSPLDFSDERLEEM 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ ++ + T D + L K+ E +K + F M DD NT+ + +
Sbjct: 315 TRSLERL-GTAIDNVLELLAMPAGAKSPEAQQLLETA-HKDEEAFENAMCDDFNTA-LAS 371
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
A D K +N N + +L +EVK V + ++++L
Sbjct: 372 AAMFDLAKNVNIFKNAVVNNGVPVDSAAL--------SEVKRVFK--------TFTDILG 415
Query: 361 QLKDKALKRAELTE----EDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
L+D+ + E +D++Q +++ R R K ++ +D IR L GI + D +
Sbjct: 416 ILEDRWTGKKEDASSKDYDDLMQAILDIRQECRAQKQYALADAIRDKLAALGITIEDSPQ 475
Query: 416 ETIWR 420
W+
Sbjct: 476 GARWK 480
>gi|385337194|ref|YP_005891067.1| cysteinyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
gi|319409608|emb|CBY89907.1| cysteinyl-tRNA synthetase (cysteine-tRNA ligase; CysRS) [Neisseria
meningitidis WUE 2594]
Length = 699
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 238/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 299 KIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 358
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 359 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 418
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 419 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 478
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 479 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 538
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 539 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 585
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ + +N Q + +K +
Sbjct: 586 FYVAMNDDFDTVKAVAVLFE-----LAGEVNKTNDAQ--------------LAGRLKALG 626
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 627 GIIGLLQ----RDPIEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAESDRIRDLLN 681
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 682 EHKIILEDNAGGTTWR 697
>gi|153855861|ref|ZP_01996836.1| hypothetical protein DORLON_02858 [Dorea longicatena DSM 13814]
gi|149751829|gb|EDM61760.1| cysteine--tRNA ligase [Dorea longicatena DSM 13814]
Length = 468
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/425 (38%), Positives = 235/425 (55%), Gaps = 36/425 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++A + G +S RY E DM + P T P ++ + + DMI +I+
Sbjct: 72 KIIKKAIEEGVTADEISKRYIAECKKDMDGMNIKPATKNPLATEEICGMVDMIQTLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY G V+++ K +YG+LS + L++ R+GER V+ + K +P DF LWK K G
Sbjct: 132 FAYEKNGTVYYSTRKFKDYGKLSHKNLDDLRSGERSLLVSGEDEKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W+SPW GRPGWHIECS MS YL + DIH GG DL+FPHHENEIAQS AA
Sbjct: 192 EPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLVFPHHENEIAQSEAANGKEF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YWMHN + +N KMSKSLGNF T+R+I+E+Y LR F++SAHYRSPLN+S ++
Sbjct: 252 ARYWMHNAFLNIDNRKMSKSLGNFRTVREISEQYDLQVLRFFMLSAHYRSPLNFSADLME 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFHARMSDDLNT 295
++ + + I + L E+ K I A + K + F M DD NT
Sbjct: 312 ASKNGLERIVNAADN----LKFLMENAKAEAITDAEAENFAKTEEFVAGFEKAMDDDFNT 367
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ + F D +K+IN++ + K+ Q+ L+ L +LGL+
Sbjct: 368 ADAVAAIF-DLVKYINTTTDAESSKEYLQKLFDLLVKLTG----------VLGLIVD--- 413
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
K+ E+ +ED+ +LIEER AARK KDF+++D IR +L KGI L D +
Sbjct: 414 ------------KKEEILDEDIEKLIEERQAARKAKDFARADAIRDELLEKGIILKDTRE 461
Query: 416 ETIWR 420
W+
Sbjct: 462 GVQWK 466
>gi|261252446|ref|ZP_05945019.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260935837|gb|EEX91826.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 436
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 236/420 (56%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++++++I +++ +I
Sbjct: 49 KIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEIIELVETLIERG 108
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F + K YG+LSGQ LE +AG RV ++S KR+ DF LWK +K GEP
Sbjct: 109 FAYVADNGDVMFEIAKYDEYGKLSGQDLEQLQAGARVEIESAKRSSLDFVLWKMSKPGEP 168
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 169 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQYVN 228
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 229 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 288
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ ++ +S AR N A M+DD NT +
Sbjct: 289 RSALERLYTSLRGLDLTVSAVGGEEYVARFNDA---------------MNDDFNTPEAYS 333
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D + IN + K + ++ SL ++ +V+ IL P
Sbjct: 334 VLF-DMAREIN---------RLKAEDVAAASSLGVTMRQLADVIGILHQDPEAF------ 377
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
LK A E+ E + LI+ R +R +KD++ +D R LT GI L D + T WR
Sbjct: 378 -LKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTTWR 434
>gi|417954102|ref|ZP_12597142.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342816142|gb|EGU51047.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 460
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 236/420 (56%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++++++I +++ +I
Sbjct: 73 KIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEIIELVETLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F + K YG+LSGQ LE +AG RV ++S KR+ DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEIAKYDEYGKLSGQDLEQLQAGARVEIESAKRSSLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ ++ +S AR N A M+DD NT +
Sbjct: 313 RSALERLYTSLRGLDLTVSAVGGEEYVARFNDA---------------MNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D + IN + K + ++ SL ++ +V+ IL P
Sbjct: 358 VLF-DMAREIN---------RLKAEDVAAASSLGVTMRQLADVIGILHQDPEAF------ 401
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
LK A E+ E + LI+ R +R +KD++ +D R LT GI L D + T WR
Sbjct: 402 -LKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|325295505|ref|YP_004282019.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065953|gb|ADY73960.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 472
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 248/420 (59%), Gaps = 24/420 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+ + G ++ +Y + Y DM L PTY+P+V++H+E+I +MI +I
Sbjct: 73 KIIKRSKEEGIPWYEVAKKYIESYEEDMKALNIKEPTYKPKVTEHIEEIIEMIKGLIAKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F+VEK YG+LS ++ E AG R+ +K+NP DFALWK +K GEP
Sbjct: 133 YAYESEGDVYFSVEKFSEYGKLSKRKTEELIAGARIEPGEKKKNPLDFALWKKSKEGEPG 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIHGGG+DLIFPHHENEIAQS A S V Y
Sbjct: 193 WESPWGIGRPGWHIECSAMAMKYLGRTMDIHGGGLDLIFPHHENEIAQSEAYTGKSFVRY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V N EKMSKSLGNFFTI+ I + + LR FL+S HYRSP+++S +L A
Sbjct: 253 WLHNGFVMVNKEKMSKSLGNFFTIKDILKEFSSDVLRLFLLSTHYRSPIDFSFERLKDAE 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + ++ E+ E T N D N + +F + M DD NT+ L
Sbjct: 313 RSFGRLLNFIESKEII-----EKLPTFEKNSEIFDVEN-YKLQFESAMDDDFNTARALGV 366
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ + N++K K K+ ++S E + +L+ +G++ +Y ++L
Sbjct: 367 IFE-----LVKEANLIKDKAIKENKIS--------NKEKETILKAIGIVE--SYLKLLGF 411
Query: 362 LKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+K K+ E E+++++ LI+ R+ RK K F +D+IR L GI L D+ TI++
Sbjct: 412 KLEK--KKQEGIEDELIKLLIDVRSELRKRKAFDLADKIRDGLKDLGIILEDLPSGTIYK 469
>gi|150392183|ref|YP_001322232.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
gi|187629786|sp|A6TWK5.1|SYC_ALKMQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|149952045|gb|ABR50573.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
Length = 464
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 238/422 (56%), Gaps = 34/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++A + + +S R+ EY D A L P+V++++ +I I +++ +
Sbjct: 72 KIIKKAQEEAVSAKEISERFIVEYFKDAATLGVDQADIHPKVTENVPEIIAFIQELLEKN 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV++ V + +YG+LS Q LE ++G R+ V+ KRN DF LWK AK GEPS
Sbjct: 132 VAYEVNGDVYYDVSRFEDYGKLSKQNLEELQSGARIEVNEAKRNSLDFVLWKTAKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIHGGG DL+FPHHENEIAQS A + +Y
Sbjct: 192 WESPWGSGRPGWHIECSAMAKKYLGETIDIHGGGGDLVFPHHENEIAQSEACTGKTFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G++ +N+KMSKSL NFFT R+I E Y +LR F++SAHYR+P+N+S L+SA
Sbjct: 252 WIHVGYLNIDNKKMSKSLDNFFTPREIAEEYDLESLRFFMLSAHYRTPVNFSRELLESAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR---DEFHARMSDDLNTSHI 298
+ +Y E L E+ K + ++ I+ L +EF+ M DD NT+
Sbjct: 312 SGLERLYNAKNHLEHIL----ENTKVEEMKETEKEWIDSLTHYSEEFNRVMDDDFNTADG 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D ++ +N+ + K+ + ++ E+ +LGLL
Sbjct: 368 IAVIF-DLVRDMNTYITGEASKEAVKAAYGML----------VELTGVLGLLR------- 409
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K E ++++ +LIE R AR K+F+KSD+IR L KGI L D +
Sbjct: 410 ---------KEEESLDKEIGRLIEARQQARIEKNFTKSDEIRDYLKEKGIVLEDTSQGVK 460
Query: 419 WR 420
WR
Sbjct: 461 WR 462
>gi|407713995|ref|YP_006834560.1| cysteinyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
gi|407236179|gb|AFT86378.1| cysteinyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
Length = 465
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/426 (42%), Positives = 240/426 (56%), Gaps = 44/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE SL++R+ D L P +PR +D + Q+ MI + N
Sbjct: 75 KIIRRAVENGETIKSLTDRFIAALHEDADALGIARPDIEPRATDFIPQMLGMIETLEANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV K YG+LSG+ LE+ RAGERVA + K +P DF LWK +KAGEP
Sbjct: 135 YAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKEDPLDFVLWKQSKAGEP 194
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ WDS +G GRPGWHIECSAM L FDIHGGG DL FPHHENEIAQS AA
Sbjct: 195 ADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQDLQFPHHENEIAQSEAATGQP 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG+V +NEKMSKSL NFFTIR++ +Y +R F+ AHYRSPLNYS + +
Sbjct: 255 FVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAHYRSPLNYSDVHI 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A +A+ +Y L D ++P + AA D F A M+DD NT
Sbjct: 315 DDARNALGRLYTALTD----VAP----------DGAALDWNEAHAQRFQAAMNDDFNTPV 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAY 355
++ F+ L + + + +L LR + +LGLL P AY
Sbjct: 361 AVSVLFE------------LATEVNRTRDPALARQLRSLGA-------VLGLLGREPRAY 401
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-G 414
LQQ A++ A L + I ER AA++ KD++ +D+IRA+L G+AL D G
Sbjct: 402 ---LQQAAGAAVEGA-LDPAAIEAKIAERVAAKQAKDYAAADRIRAELLEAGVALEDKPG 457
Query: 415 KETIWR 420
T WR
Sbjct: 458 GLTEWR 463
>gi|315652374|ref|ZP_07905363.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485348|gb|EFU75741.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 469
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 243/426 (57%), Gaps = 37/426 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +A + G + +S RY E DMA + LP T P + +E ++DMI ++I +
Sbjct: 72 KIINKAIEEGVDAAVISQRYINECKKDMAAMNVLPATKNPLATQEIEGMEDMIGKLIKSG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKA 117
AYV +G V+F V+ +YG+LS + ++ ++G R V + K + DF LWK K
Sbjct: 132 HAYVAKDGTVYFRVKSFKDYGKLSHKNIDELQSGFREIKVTGEDGKEDSNDFVLWKPKKE 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP W+SPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENEIAQS +A S
Sbjct: 192 GEPYWESPWSKGRPGWHIECSVMSKKYLGEQIDIHGGGEDLIFPHHENEIAQSESASGKS 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
+YWMHN + +N+KMSKS GNFFT+R I+E+Y LR F++SAHYRSPLN+S +
Sbjct: 252 FANYWMHNAFLNIDNKKMSKSAGNFFTVRDISEKYDLQVLRFFMLSAHYRSPLNFSAELM 311
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA---EDCINKLRDEFHARMSDDLN 294
++A +++ I + + + ++ TA I A + L+D+F M DD N
Sbjct: 312 EAAKNSLERILTGMDNIKTVIA----RNNTAPITDAELSNLEIAKVLKDKFADAMDDDFN 367
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T+ ++ F+ +K N++LN + S +E + + N ++ + +LG++
Sbjct: 368 TADAVSAIFE-LVKLSNTTLN----------ENSTVEYAKGLLNVIEPLCDVLGIITE-- 414
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
++ E+ + ++ LI R ARKNKDF+ +D+IR DL KGI L D
Sbjct: 415 -------------RKTEILDSEIEDLIARRTQARKNKDFALADKIRNDLLEKGIVLEDTR 461
Query: 415 KETIWR 420
+ W+
Sbjct: 462 EGVKWK 467
>gi|241758928|ref|ZP_04757040.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
gi|241320749|gb|EER56982.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
Length = 477
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 236/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY V DV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAVNDDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|423207191|ref|ZP_17193747.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|404620258|gb|EKB17155.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
Length = 458
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 237/422 (56%), Gaps = 41/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + L+ R + D L + P +PR + H+E+I +++ ++ +
Sbjct: 73 KIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEIIELVQSLLEKE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D A + + + AR A M DD NT +
Sbjct: 313 RAALERMYTALRDLPAAAAAGGDE-QVARFKEA---------------MDDDFNTPEAYS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K + +++ +L ++E+ +LG +LQ
Sbjct: 357 ALF-DLVREIN---------RQKGEDMAVAAALGA---RLRELGAVLG---------ILQ 394
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + LK E EE ++ +LI ER AR +K+++ +D R LT GI L D +T
Sbjct: 395 QDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLEDSAGKTS 454
Query: 419 WR 420
WR
Sbjct: 455 WR 456
>gi|427828191|ref|ZP_18995209.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|316983974|gb|EFV62953.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
Length = 587
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/436 (39%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 187 KIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 246
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 247 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 306
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 307 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 366
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 367 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 426
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 427 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 473
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ + +N Q + +K +
Sbjct: 474 FYVAMNDDFDTVKAVAVLFE-----LAGEVNKTNDAQ--------------LAGRLKALG 514
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 515 GIIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 569
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 570 EHKIILEDNAGGTTWR 585
>gi|289548117|ref|YP_003473105.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289181734|gb|ADC88978.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 490
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 242/421 (57%), Gaps = 8/421 (1%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +A + + ++++NRY Y DM + P +PRV++H+++I +I +I+
Sbjct: 74 KIINKAREECTHFMTVANRYIASYYRDMEAIGVRPADVEPRVTEHIQEIIQLIQGLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV GDV+F+V+ P YG+LS + E AG RV +KR+P DFALWKAAKAGEP+
Sbjct: 134 YAYVSGGDVYFSVKAFPEYGKLSRRNPEELEAGARVEPSEKKRDPLDFALWKAAKAGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWH EC AM +L + DIHGGG+DL+FPHHENEIAQ+ A Y
Sbjct: 194 WDSPWGPGRPGWHTECVAMIFKHLGTTIDIHGGGLDLVFPHHENEIAQAEALTGRPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT +KMSKSLGN+ T+R++ RYHP LR ++ HYRSPL++S +++
Sbjct: 254 WVHNGLVTVGGQKMSKSLGNYVTLREVYSRYHPDVLRLLVLMTHYRSPLDFSWDKMEETK 313
Query: 242 DAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ + + D E+ P +E R D I ++F A ++DD NT L
Sbjct: 314 RSYERLKNAITDAELLKELPSEE----VREKHPLLDKIRDAEEKFFADLADDFNTPSALG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + +L++++ K +L + + E +K + I GL ++
Sbjct: 370 RLFTLVSEMGKLKKEVLERRRVKTSELDAYQ--QASETLLKHLRGIFGLFEDLYPVCSVR 427
Query: 361 QLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
++ +K ++ + +E +++ LIE R+ AR+ K ++ +D IR L GI L D T W
Sbjct: 428 RVVEKEMEAGHVLDERLIELLIEVRSKARQEKAYAIADLIRDRLRELGIILEDTPAGTKW 487
Query: 420 R 420
+
Sbjct: 488 K 488
>gi|288818363|ref|YP_003432711.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|384129119|ref|YP_005511732.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787763|dbj|BAI69510.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|308751956|gb|ADO45439.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
Length = 490
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 243/426 (57%), Gaps = 18/426 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + + ++++NRY Y +DM ++ P +PRV++H+++I D+I ++
Sbjct: 74 KIINRAKEENTDFMTIANRYIASYYIDMESIKVKPADVEPRVTEHLQEIIDVIKGLVEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F+V+ P YG+LS + E G RV +KR+P DFALWK+AKAGEP+
Sbjct: 134 YAYESGGDVYFSVKAFPEYGKLSKRSTEELEVGARVEPSEKKRDPLDFALWKSAKAGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWH EC AM +L DIHGGG+DL+FPHHENEIAQ+ A Y
Sbjct: 194 WESPWGLGRPGWHTECVAMVFKHLGKTIDIHGGGLDLVFPHHENEIAQAEALTGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG VT +KMSKSLGN+ T+R++ RYHP LR ++ HYRSPL++S +++ A
Sbjct: 254 WMHNGLVTVGGQKMSKSLGNYVTLREVYRRYHPDVLRLLVLFTHYRSPLDFSWEKMEEAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQ--EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A I ++D ++ L Q E K +++ + + + + F +S+D NT L
Sbjct: 314 RAYERIRHAIEDLDM-LKNLQVVEENKISQLY----EKVKEAEEAFFEDLSEDFNTPSAL 368
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLR----ILGLLPPGAY 355
+ F + L +K + ++++S + L E V +LR I GL
Sbjct: 369 SHIFA-----LVGELGKVKSRAISERRISR-QDLSAYEFAVSSILRHMRGIFGLFEDIYP 422
Query: 356 SEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ ++++ + L+ ++ +E ++ L++ R AR K F +D IR L GI L D
Sbjct: 423 EKPVREVVRRELEAGQVLDERLIDILVDVRNQARAEKVFKIADYIRDRLKEVGIVLEDTP 482
Query: 415 KETIWR 420
T WR
Sbjct: 483 AGTKWR 488
>gi|336435108|ref|ZP_08614826.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 1_4_56FAA]
gi|336002001|gb|EGN32128.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 1_4_56FAA]
Length = 468
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 230/422 (54%), Gaps = 30/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G +S RY E DMAD+ LP T P ++ + + ++I +I
Sbjct: 72 KIIKKANEEGVTAEEISKRYIAECKKDMADMNVLPATTHPLATEEIGGMIELIGTLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY G V+F + +YG+LS + L++ R+G R V+ + K +P DF LWK K G
Sbjct: 132 YAYAKNGTVYFRTRQFKDYGKLSHKNLDDLRSGNRALLVSGEDEKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W+SPWG GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQS AA
Sbjct: 192 EPAWESPWGEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLIFPHHENEIAQSEAANGKEF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YWMHNG + +N KMSKSLGNFFT+R+I E+Y LR F++SAHYRSPLN+S ++
Sbjct: 252 SKYWMHNGFLNIDNRKMSKSLGNFFTVREIGEKYDLQVLRFFMLSAHYRSPLNFSAELME 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+A + + I + L T E +++ F M DD NT+
Sbjct: 312 AAKNGLDRIVTATDNLRFLLGKASVDTLTEEEQAQMEKAQGFVKN-FENAMEDDFNTADA 370
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D +K N++ + K Q L LI L +LG++
Sbjct: 371 VAAIF-DLVKHANTTASAESSKAYLQGVLDLIVKLSD----------VLGIITE------ 413
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ +L + D+ LI ER AARK ++F+++D+IR +L KGI L D +
Sbjct: 414 ---------RKEDLLDADIEALIAERQAARKERNFARADEIRDELLAKGIILEDTREGVK 464
Query: 419 WR 420
W+
Sbjct: 465 WK 466
>gi|15677904|ref|NP_275072.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|385854125|ref|YP_005900639.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|416198682|ref|ZP_11619049.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|433466065|ref|ZP_20423533.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|433491440|ref|ZP_20448549.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|433505933|ref|ZP_20462861.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|433508075|ref|ZP_20464969.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|433510233|ref|ZP_20467087.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|433512288|ref|ZP_20469096.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
gi|30316184|sp|Q9JXE6.1|SYC_NEIMB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|7227346|gb|AAF42401.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|325139404|gb|EGC61944.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|325201129|gb|ADY96584.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|432200267|gb|ELK56364.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|432225192|gb|ELK80945.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|432238457|gb|ELK94023.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|432238657|gb|ELK94222.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|432244477|gb|ELK99965.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|432244649|gb|ELL00134.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
Length = 473
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/436 (39%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ + +N Q + +K +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFE-----LAGEVNKTNDAQ--------------LAGRLKALG 400
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 401 GIIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|403059410|ref|YP_006647627.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402806736|gb|AFR04374.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 461
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 179/426 (42%), Positives = 230/426 (53%), Gaps = 46/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+ R E D L L P +PR + H+ I +M+ +I
Sbjct: 73 KIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADIIEMVETLIARR 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A S V+
Sbjct: 193 HWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQSSCAHDGSYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTS 296
A+ +Y L+ + + + HG DEF AR M DD NT
Sbjct: 313 RAALDRLYTALRGTDASAAA---HGG----------------DEFEARFREAMDDDFNTP 353
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGA 354
+ F A +N L K + Q L +LRK+ +LGLL P
Sbjct: 354 EAYSVLFDMA-----REVNRL-KTEDVQAANQLASALRKLSG-------VLGLLEQDPEQ 400
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ + Q+ D+ +K E LI++R AR KD++ +DQ R L GI L D
Sbjct: 401 FLQNGAQVDDEEVKEIE-------ALIQQRKDARAAKDWALADQARDRLNDMGIVLEDGP 453
Query: 415 KETIWR 420
+ TIWR
Sbjct: 454 QGTIWR 459
>gi|421556545|ref|ZP_16002460.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
gi|402337218|gb|EJU72468.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
Length = 473
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 232/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKA KAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKATKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|261345727|ref|ZP_05973371.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
gi|282566216|gb|EFB71751.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
Length = 462
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 238/422 (56%), Gaps = 37/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ L+ R E D L L P +PR + H+ +I ++ +I
Sbjct: 73 KIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEIIELTESLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V+ PNYG LS Q L+ +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L S FDIHGGG DL+FPHHENEIAQS A + V+
Sbjct: 193 SWESPWGLGRPGWHIECSAMNSKTLGSHFDIHGGGSDLMFPHHENEIAQSTCAHEGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS LNY+ L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTIRDVLQYYDAETVRYFLLSGHYRSQLNYTEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ + +++P AR A M+DD NT +
Sbjct: 313 RTALERLYTSLRGTDKSVAPAGGEAFKARFCEA---------------MNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F I +N LK + + + + +++E+ ++LGLL P A+ +
Sbjct: 358 VLFD-----IAREINRLKTED--------MAAANGMAAQLRELAKVLGLLEQEPEAFLQG 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +D AE+ + + LI++R AR++KD++ +DQ R LT G+ L D T
Sbjct: 405 GAQGEDD----AEVAK--IEALIKQRNDARQSKDWALADQARDALTAMGVVLEDSSAGTT 458
Query: 419 WR 420
WR
Sbjct: 459 WR 460
>gi|225077094|ref|ZP_03720293.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
gi|224951651|gb|EEG32860.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
Length = 473
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPATAFELSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|421545409|ref|ZP_15991472.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|421547458|ref|ZP_15993493.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|421549491|ref|ZP_15995504.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|421551603|ref|ZP_15997590.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|421553643|ref|ZP_15999602.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|421567919|ref|ZP_16013650.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|433472311|ref|ZP_20429687.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|433478638|ref|ZP_20435944.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|433527099|ref|ZP_20483716.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|433539845|ref|ZP_20496309.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
gi|402320768|gb|EJU56249.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|402320956|gb|EJU56436.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|402323198|gb|EJU58644.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|402326610|gb|EJU62009.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|402327463|gb|EJU62851.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|402342864|gb|EJU78020.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|432206264|gb|ELK62273.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|432212918|gb|ELK68849.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|432257916|gb|ELL13208.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|432270890|gb|ELL26023.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
Length = 473
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/436 (39%), Positives = 236/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ + +N Q + +K +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFE-----LAGEVNKTNDAQ--------------LAGRLKALG 400
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ + L+ E++ LI R AR +K++++SD+IR L
Sbjct: 401 GIIGLLQRDP-TEFLQ----GSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|17228587|ref|NP_485135.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
gi|21264005|sp|Q8YXW5.1|SYC_NOSS1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|17130438|dbj|BAB73049.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 486
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/431 (40%), Positives = 249/431 (57%), Gaps = 34/431 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+ RA + G +SNR+ Y D+ L L PRV++H+ +I +I +
Sbjct: 74 KILNRAKEQGLTMAEVSNRFIDAYFADIRRLNVLDADEYPRVTEHIPEIHQLIQILEEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS-----RKRNPADFALWKAAK 116
AY V GDV++ VE+ P+YG+LSG+ LE +AG VD+ +K++P DFALWKAAK
Sbjct: 134 LAYAVGGDVYYRVERFPSYGKLSGRELEQMQAGASGRVDAEDSEPKKQHPFDFALWKAAK 193
Query: 117 AGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD 176
GEP+WDSPWG GRPGWHIECSAM L + DIHGGG DLIFPHHENEIAQS AA
Sbjct: 194 PGEPAWDSPWGAGRPGWHIECSAMIRSKLGATIDIHGGGGDLIFPHHENEIAQSEAAMNQ 253
Query: 177 SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER--------YHPLALRHFLISAHYRS 228
YW HNG V N +KMSKSLGNF TIR++ + +P+A+R F++ AHYR
Sbjct: 254 PLARYWTHNGMVMVNGQKMSKSLGNFITIRELLDGVGSWKEDPVNPMAVRLFVLQAHYRK 313
Query: 229 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 288
PL+++ + +A ++ ++TL+ E L +Q K +A I +L F
Sbjct: 314 PLDFTEEAIATAENS----WKTLK--EGLLFGYQYGEKLGWGQESA--IIPELATRFQEL 365
Query: 289 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 348
DD N S L F+ A K + N+L + + + + L++ N + + +ILG
Sbjct: 366 GDDDFNFSGGLAVLFELA-KELRREGNILVHEGTTK---TPSDELQRQWNTLVTLAKILG 421
Query: 349 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 408
L +L D+ +A L++ D+ LIE+R AARKNK+FS+SD+IR +L +G+
Sbjct: 422 LEA---------KLDDETQTQAGLSDTDIEALIEQRQAARKNKNFSESDRIRNELQAQGV 472
Query: 409 ALMDMGKETIW 419
L+D + T W
Sbjct: 473 TLIDSPQGTRW 483
>gi|261379506|ref|ZP_05984079.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
gi|284797969|gb|EFC53316.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
Length = 473
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAK GEP
Sbjct: 133 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKVGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + ++ L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPIEFLQGGAVSDG-LSNEEIEDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|428218169|ref|YP_007102634.1| cysteinyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
gi|427989951|gb|AFY70206.1| cysteinyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
Length = 485
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/414 (39%), Positives = 239/414 (57%), Gaps = 15/414 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA G +S+RY Y DMA L +P PR ++ +E I D+I + D
Sbjct: 74 KILKRAQQEGVTMQEISDRYIATYNEDMARLNIMPADEYPRATESIEAIIDLIKALEAQD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAV-DSRKRNPADFALWKAAKAG 118
AY GDV++AV+K P YG+LSG++L + +AG RVAV + KR P DFALWKAAK G
Sbjct: 134 YAYAAGGDVYYAVQKFPTYGKLSGRKLADMQAGASGRVAVGEELKRYPFDFALWKAAKPG 193
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP W SPWG GRPGWHIECSAM L + DIH GG DL FPHHENEIAQS A
Sbjct: 194 EPFWQSPWGEGRPGWHIECSAMVRSRLGDQIDIHAGGADLQFPHHENEIAQSEGATHQPL 253
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YW+HNG V + EKMSKSLGNF TIR++ + Y P+A+R F++ +HYR P++++ ++
Sbjct: 254 ARYWLHNGFVNIDGEKMSKSLGNFTTIRELLKHYDPMAIRLFILQSHYRQPIDFTEEAIN 313
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+A+ ++T++D + F + R+ A + L D FH M DD NTS
Sbjct: 314 AATRG----WETIRDGLLFKHDFGDQLGWDRLAVALDQLDQNLLDRFHGAMDDDFNTSIA 369
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ A K + + N L +++ + + + +VL + P A S
Sbjct: 370 ISLLFELA-KPLKAEANKLVHSGKSDLASAVLAQTWQTLSYLSDVLGFIA--DPEARSNA 426
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+ + A ++++ + ++++R AARK KDF+ SD++R L GI L+D
Sbjct: 427 -----NHSNDSATVSDDQIETMVQQRCAARKAKDFAASDRLRDQLKELGITLID 475
>gi|296333091|ref|ZP_06875545.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672793|ref|YP_003864464.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149707|gb|EFG90602.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411036|gb|ADM36154.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 466
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 228/424 (53%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+ I D + Q++
Sbjct: 74 KLIKAANELGEDVPAISERFIKAYFEDVGALGCRKADLHPRVMENMDAIIDFVDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
A + A S Q H + N +D + + R F M DD NT+
Sbjct: 314 SA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRKAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L K + IE +I + +LG
Sbjct: 366 NAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI-------VSVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|298369710|ref|ZP_06981027.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282267|gb|EFI23755.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
Length = 473
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAVAFELSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIEDLIARRKQARSDKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|294671003|ref|ZP_06735859.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307490|gb|EFE48733.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 473
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAG+RV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGKRVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAHLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQ----RDPTEFLQGGAVSDG-LSNEEIDDLIARRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|312862597|ref|ZP_07722838.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
gi|311101857|gb|EFQ60059.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
Length = 447
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 229/421 (54%), Gaps = 52/421 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + LS+++ ++ D A L P T PRV ++M++I ++ +I+
Sbjct: 73 KIIKAANEAGISTKELSDKFITAFMEDTAQLGIKPATQNPRVINYMDEIIAFVSTLIDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK NP DFALWKAAK G
Sbjct: 133 FAYVAEGDVYFRVAKSKNYAKLANKTLEDLEIGASGRTDAETDRKENPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SW+SPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + D EV L + + +D + D F M DD NT++
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTDQVNQDELQTYLDAFQVAMDDDFNTANG 358
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K+INS +++ +++L++ G+ V
Sbjct: 359 VTVLF-DMAKWINSG-----------------NYDETVKDAFEKMLQVFGI--------V 392
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ E+ +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 393 FEE---------EVLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVR 443
Query: 419 W 419
W
Sbjct: 444 W 444
>gi|118595239|ref|ZP_01552586.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
gi|118441017|gb|EAV47644.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
Length = 456
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 234/422 (55%), Gaps = 43/422 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + G L+ ++ E D L + P +P+ ++ ++ + MI +I
Sbjct: 73 KIITRAAEQGVTYGVLTKQFIDEMNADAEALGVISPDAEPKATESIDAMIIMIQGLIEKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV DVF+AV K YG+LSG+ LE+ RAG RV VD K+N DF LWK+AK GEP
Sbjct: 133 YAYVGSNNDVFYAVSKFNGYGKLSGKSLEDLRAGNRVEVDKFKKNSFDFVLWKSAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA--ACQDSN 178
W+SPWG GRPGWHIECSAMS +L FDIHGGG DL FPHHENEIAQS A CQ +N
Sbjct: 193 CWNSPWGKGRPGWHIECSAMSNKFLGKNFDIHGGGQDLQFPHHENEIAQSEAFNGCQMAN 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YW+HNG V +NEKMSKSLGNFFTIR+I Y P +R F++ A YRSPLNYS L+
Sbjct: 253 --YWLHNGFVKVDNEKMSKSLGNFFTIREILNHYEPEIVRFFVLKAQYRSPLNYSDTHLE 310
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A + +Y ++ G RI+ D N +F + DD NTS
Sbjct: 311 DAKQGLTRLYLAIR------------GNDTRIDQEI-DWKNNFASQFKDALDDDFNTS-- 355
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+A+ + S N + K Q++ LI ++ ILG+L E+
Sbjct: 356 ------EAISILFSLANEVNKSNQDQEKQLLI-----------QLANILGIL------EM 392
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+L + ++ + D+ LI +R +A+KNKD+ K+D+IR L I L D TI
Sbjct: 393 DPELFLRGNIKSSDNDIDIDLLISDRLSAKKNKDYQKADEIRIFLEGHDILLEDTPNGTI 452
Query: 419 WR 420
WR
Sbjct: 453 WR 454
>gi|398813150|ref|ZP_10571852.1| cysteinyl-tRNA synthetase [Brevibacillus sp. BC25]
gi|398039311|gb|EJL32449.1| cysteinyl-tRNA synthetase [Brevibacillus sp. BC25]
Length = 468
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 239/425 (56%), Gaps = 38/425 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR AN G +++RY Y D+ L PP QPRV + +I + + +I
Sbjct: 74 KLIRVANQEGVTVKEVADRYTDAYNADLKSLNVTPPDIQPRVMQTIPEIIEFVQGLIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F + YG+LS Q L++ +AG RV ++ +K +P DF LWKAAK GE +
Sbjct: 134 FAYESEGDVYFRTGRFQEYGKLSHQPLDDLQAGARVEINEKKEHPLDFVLWKAAKTGEVT 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ +L + DIH GG DL+FPHHENEIAQS Y
Sbjct: 194 WDSPWGDGRPGWHIECSAMALKFLGEEIDIHAGGTDLVFPHHENEIAQSECFTGKVFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + +NEKMSKSLGNF R ++E++ +R F++ HYR+P+N+S ++ A+
Sbjct: 254 WLHNGMLNIDNEKMSKSLGNFLLARDLSEKFGGQLIRFFMLQGHYRNPINFSEELIEQAA 313
Query: 242 DAVFYI---YQTLQ---DCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNT 295
+ + I Y L D A P + + ARI I +LR+ F A M DD+NT
Sbjct: 314 NGLDRIKTAYTNLSHRLDTVRAEEPNDQAQEQARI-------IGELRERFIAEMDDDINT 366
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
++ +T F D +K N L + Q + E +R + + E+ +LGL
Sbjct: 367 ANAITVIF-DIVKEANLYL--------RHQNVGETE-VRAYMDLLVELTEVLGL------ 410
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
E+ ++ EL + ++ LIEER ARK +DF++SD+IR L KGI L D +
Sbjct: 411 -EIAEE--------QELLDSEIDALIEERTEARKARDFARSDEIRDLLAAKGIVLEDTPQ 461
Query: 416 ETIWR 420
WR
Sbjct: 462 GVRWR 466
>gi|229846997|ref|ZP_04467103.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|229810081|gb|EEP45801.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
Length = 459
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 235/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVVF-----------GGENFVETFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + +E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKAED--------VEKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD++ +D R +LT GI L D T
Sbjct: 396 QEPEKFLQAGSNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLEDGANGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|260655864|ref|ZP_05861333.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|424844377|ref|ZP_18268988.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
gi|260629480|gb|EEX47674.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|363985815|gb|EHM12645.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
Length = 467
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/419 (38%), Positives = 235/419 (56%), Gaps = 28/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I RAN G L+ + +Y D L +Y PR +++M QI ++ ++I+
Sbjct: 74 KMIDRANRDGITVAQLAEKTIADYYEDADALGIKRASYNPRATEYMPQIIQLVQKLIDRG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V G V+F V+ P YGRLS Q ++ AG R+ VD K+ P DF LWK K GEP+
Sbjct: 134 HAYAVGGTVYFDVKSFPQYGRLSKQNMDELLAGARIEVDDAKKCPLDFVLWKPQKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS L DIH GG+DL FPHHENEIAQ+ AA V++
Sbjct: 194 WDSPWGKGRPGWHIECSVMSTALLGDTIDIHSGGVDLTFPHHENEIAQAEAATGKPFVNF 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HN ++ + EKMSKSLGNF T R+ + Y PLA+R F++SAHYRSP+N+S L+ A
Sbjct: 254 WLHNEYILIDKEKMSKSLGNFLTAREARKHYSPLAIRAFMLSAHYRSPVNFSPEGLEQAG 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
V + L++C L + + + + + + + R++F M DD NT+ L G
Sbjct: 314 AMV----ERLRNCWSDLQFAKSRRDLSYDDASLSEAVRQGREDFEEAMDDDFNTAGAL-G 368
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A + +K +N+ L K ++ K +++EV+ +LG
Sbjct: 369 AVFEVVKAVNTHLKSSGALSGKG-----LDDAEKFFRDIEEVMGLLG------------- 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L + ++ L+E+R AARK K+F++SD++R +L +GI L D + T W+
Sbjct: 411 -----LSHETDGDAEIDALVEQRNAARKAKNFAESDRLRDELAARGIVLEDTPQGTKWK 464
>gi|322517683|ref|ZP_08070546.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
gi|322123671|gb|EFX95263.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
Length = 447
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 230/421 (54%), Gaps = 52/421 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + LS+++ ++ D A L P T PRV ++M++I ++ +I+
Sbjct: 73 KIIKAANEAGISTKELSDKFITAFMEDTAQLGIKPATQNPRVINYMDEIIAFVSTLIDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK NP DFALWKAAK G
Sbjct: 133 FAYVAEGDVYFQVAKSKNYAKLANKTLEDLEIGASGRTDAETDRKENPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SW+SPWGPGRPGWHIECS M+ L + DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EISWESPWGPGRPGWHIECSVMATEILGNTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + D EV L + + +D + D F M DD NT++
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTDQVNQDELQTYLDAFQVAMDDDFNTANG 358
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K+INS +++ +++L++ G+ V
Sbjct: 359 VTVLF-DMAKWINSG-----------------NYDETVKDAFEKMLQVFGI--------V 392
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ E+ +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 393 FEE---------EVLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTREGVR 443
Query: 419 W 419
W
Sbjct: 444 W 444
>gi|16272052|ref|NP_438251.1| cysteinyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
gi|260580618|ref|ZP_05848445.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
gi|1174501|sp|P43816.1|SYC_HAEIN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|1573026|gb|AAC21753.1| cysteinyl-tRNA synthetase (cysS) [Haemophilus influenzae Rd KW20]
gi|260092680|gb|EEW76616.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
Length = 459
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 235/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWASPWGAGRPGWHIECSAMNCKQLGEYFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVAF-----------GGENFVATFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + +E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD+S +D R +LT GI L D T
Sbjct: 396 QEPEKFLQAGSNDDEVAKIEALIKQRNEARTAKDWSAADSARNELTAMGIVLEDGPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|282850303|ref|ZP_06259682.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294793811|ref|ZP_06758948.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
gi|282579796|gb|EFB85200.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294455381|gb|EFG23753.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
Length = 482
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 243/428 (56%), Gaps = 33/428 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G + +++NRY Y M L PRVS H++ I MI +I+
Sbjct: 75 KIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHIDDIIAMIQTLIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD RK+NP DFALWKAAK GEP
Sbjct: 135 YAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPY 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS C+ Q V
Sbjct: 195 WESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSG-QHPAV 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 254 RYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEE 313
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL-------RDEFHARMSDD 292
A+ ++L+ A+ + P + D +L +EF MSDD
Sbjct: 314 AN-------KSLERLSTAIENLL---YLEKCEPGSCDEAQRLLEKAKAYEEEFEDAMSDD 363
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT+ + F A +N+ + ++ + E++ +++ K + ++G+L
Sbjct: 364 FNTALATSSMFGLA-----KEINIYYQAVTSREGVVCQEAIAEVKRIFKFMTDVIGVLE- 417
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+ + A EE + ++ R A R+ K ++ +D IR L GI + D
Sbjct: 418 -------KAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIGITIED 470
Query: 413 MGKETIWR 420
+ W+
Sbjct: 471 SPQGARWK 478
>gi|385800588|ref|YP_005836992.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 483
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 246/426 (57%), Gaps = 31/426 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA + P +L+N+Y +L D+ + P RVS+++ +I +M+T +I
Sbjct: 73 KIVQRAAEEDLKPAALANKYANAFLEDLREFNVKPADKYLRVSENVAEIIEMVTTLIEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V G+V+F+VE +YG+LSG+ L+ +AG R+AV+ KRNP DF LWK ++ E
Sbjct: 133 YAYEVNGNVYFSVESFADYGKLSGRNLDEMQAGARIAVNKEKRNPLDFGLWKKVES-ETG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG G PGWHIECSAMS L S FDIHGGG+DLIFPHHENEIAQS A V+Y
Sbjct: 192 WDSPWGEGWPGWHIECSAMSMKRLGSTFDIHGGGVDLIFPHHENEIAQSEAYSDQKFVNY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V + EKMSKS GNFFT R++ + + +R+FL++ HYRSP+++S +L+ A+
Sbjct: 252 WLHNGTVNLSGEKMSKSQGNFFTSREVLKEFSAEVVRYFLLTRHYRSPIDFSYEKLEEAA 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK--------LRDEFHARMSDDL 293
++ I T + LS IN AAE+ I + + EF A + DD
Sbjct: 312 TSLTRIKNTRKQLAKVLS--------LDINSAAENKIEQEFFENIISKKKEFIAALKDDF 363
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPG 353
NT+ + G D INS +N K+ ++ +L+ KI E++ ILGL
Sbjct: 364 NTAEAI-GVIHDLAGEINSYINR-KEFDLNEKNFALLTKTEKI---FLELIEILGLEF-- 416
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
+L+ + +EL V LI+ R AR+NK++ ++D IR L GI ++D
Sbjct: 417 -------KLESASESESELVSPLVNLLIKLRNKARENKNWQEADLIRDQLEEIGIEVIDS 469
Query: 414 GKETIW 419
T W
Sbjct: 470 PHGTEW 475
>gi|421541345|ref|ZP_15987471.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
gi|402314868|gb|EJU50436.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
Length = 473
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 236/436 (54%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ T +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKN-------------TPPADPMPSEADDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ L + K L L+ +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI +R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIAQRKQARADKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|319775019|ref|YP_004137507.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|329123076|ref|ZP_08251646.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
gi|317449610|emb|CBY85816.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|327471631|gb|EGF17073.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
Length = 459
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 235/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGSRIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVVF-----------GGENFVETFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + +E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD++ +D R +LT GI L D T
Sbjct: 396 QDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLEDGANGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|260913075|ref|ZP_05919557.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632662|gb|EEX50831.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
Length = 467
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 237/430 (55%), Gaps = 36/430 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA E+ L +R E D L L P +PR + H+ +I ++ ++I
Sbjct: 73 KIIKRALKNRESCDQLVDRMVAEMYKDFDMLNVLRPDVEPRATHHIAEIITLVEKLIQRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F VE YG+LS Q LE +AG RV + K+NP DF LWK +K EP
Sbjct: 133 HAYVSSNGDVMFNVESFKEYGKLSRQNLEQLQAGARVEIVHIKKNPMDFVLWKMSKPEEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWGPGRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A + V+
Sbjct: 193 SWDSPWGPGRPGWHIECSAMNYKVLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGNQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G + + EKMSKSLGNFFT+R + Y ++R+FL++AHYRSPLNYS L+ A
Sbjct: 253 YWMHSGMIMVDREKMSKSLGNFFTLRDVLNIYDAESVRYFLLNAHYRSPLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + K+A I E+ IN F M+DD NT + ++
Sbjct: 313 HTALERLYTALRGTD----------KSA-IACGGENYINA----FKEAMNDDFNTPNAVS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ I +N LK + +E + ++E+ ILGLL +
Sbjct: 358 VLFE-----IAREVNKLKNED--------MEKANSLAARLRELADILGLLYQDPEEFLQS 404
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L D+ +K E LI++R AR KD++ +D R L++ + L D T WR
Sbjct: 405 GLDDEEVKLIE-------SLIKQRNEARAAKDWATADAAREQLSKMKVVLEDGANGTTWR 457
Query: 421 PCVLVEQEQE 430
+ E E E
Sbjct: 458 KDIQTESEAE 467
>gi|237747642|ref|ZP_04578122.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
gi|229379004|gb|EEO29095.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
Length = 462
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 175/424 (41%), Positives = 244/424 (57%), Gaps = 43/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE SL++R+ Q D L LPP ++PR ++++ ++ ++I ++ N
Sbjct: 75 KIINRAAENGEPISSLTSRFTQYMHEDTCALGILPPDHEPRATEYVPEMLELIGKLEKNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V YG+LSG+ L++ RAGERV +++ KR+P DF LWK+AK EP
Sbjct: 135 LAYQSTDGDVNYSVRDFEGYGKLSGKSLDDLRAGERVDINTGKRDPLDFVLWKSAKPTEP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
W S WG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQS A
Sbjct: 195 EEAKWPSRWGTGRPGWHIECSAMSSKLLGEHFDIHGGGADLQFPHHENEIAQSEGASHHP 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR + + Y LR F+I +HYRSPLNYS L
Sbjct: 255 FVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKSYDAEVLRFFIIRSHYRSPLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A +A+ +Y L+D +V A D ++ F + M+DD NT
Sbjct: 315 DDAKNALTRLYTALKDVDV--------------KDQAVDWDSEYAKRFASAMNDDFNTPE 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A N + + L ++ +++K + +LGLL +
Sbjct: 361 AVAVLFELA--------NEVNRTH-----------LAELGSQLKALAGVLGLLERDP-RQ 400
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKE 416
LQ D A+ E E+ + I+ R A+K K+F+++D+IR++L KGI L D G
Sbjct: 401 FLQ--GDGAVDEGE--EKWIESQIQARIDAKKAKNFAEADKIRSELLEKGIVLEDKPGGL 456
Query: 417 TIWR 420
T WR
Sbjct: 457 TEWR 460
>gi|270157070|ref|ZP_06185727.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
gi|269989095|gb|EEZ95349.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
Length = 464
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 233/420 (55%), Gaps = 42/420 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ L+ +Y D L LPP +PR +DH+ I +I +++
Sbjct: 83 KIIARAHERAIPIDELTAQYIAAMNEDTQALNILPPDVEPRATDHIHSIIHLIERLLAKG 142
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ + GDV + V +YG+LS + LE AG RV + KR+P DF LWK AK GEP
Sbjct: 143 NAYLSDNGDVCYQVNSFADYGKLSNKDLEGLMAGARVEIVKEKRSPLDFVLWKKAKQGEP 202
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L +FDIHGGG+DL FPHHENEIAQS AA + +
Sbjct: 203 SWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDLQFPHHENEIAQSEAATEKPFAN 262
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + NNEKMSKSLGNFFTI + ++HP +R+FL+S+HYRS LNYS L +A
Sbjct: 263 YWLHVGMLQVNNEKMSKSLGNFFTIADVLAKHHPEVVRYFLLSSHYRSSLNYSEENLANA 322
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +YQT++D S F G + N +EF+ M+DD NT L+
Sbjct: 323 KKALTRLYQTIKD-----SRFIADG----------ELDNHWINEFNQAMNDDFNTPVALS 367
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
FQ L + K L +L+ + N + L L P ++ +
Sbjct: 368 VMFQ------------LSHEVNKSNSPILAATLKYLGNTMG-----LLLTDPSSFLQSGL 410
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+DKA + QLI ER AR +++ ++DQIRADL +GI L D T WR
Sbjct: 411 DDEDKA---------SIEQLINERLQARTERNWERADQIRADLLSRGIELEDGANGTTWR 461
>gi|340356801|ref|ZP_08679442.1| cysteine--tRNA ligase [Sporosarcina newyorkensis 2681]
gi|339620139|gb|EGQ24710.1| cysteine--tRNA ligase [Sporosarcina newyorkensis 2681]
Length = 473
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 240/422 (56%), Gaps = 34/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+L E L+NR+ + Y D+ L C T PRV++H+ I I +I
Sbjct: 81 KIIKAANELNEEVGELTNRFIEAYFEDVGALGCEKATAHPRVTEHIGDIVQFIQLLIEKG 140
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F + YG+LS Q ++ + G R+ ++ K +P DFALWKAAK GE S
Sbjct: 141 YAYESNGDVYFHTREFDGYGKLSHQSIDELKVGARIEENAIKSDPLDFALWKAAKEGEIS 200
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS AA + +Y
Sbjct: 201 WDSPWGKGRPGWHIECSVMARELLGDTIDIHAGGQDLTFPHHENEIAQSEAATGKTFANY 260
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++ P LR F++S HYR P+N++ +++A+
Sbjct: 261 WMHNGYINIDNEKMSKSLGNFILVHDIRKQIDPQVLRFFMLSVHYRHPVNFAQDLVENAA 320
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---FHARMSDDLNTSHI 298
+ + I + + LS +A + + ++++ ++ F M DD NT++
Sbjct: 321 NGLERIRTAYHNVQHRLS------MSADLAEDPQSWLSRIDEQITAFENAMDDDFNTANA 374
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ A + +++ +L+K +Q +E+ +++ +LGL + V
Sbjct: 375 IAAIFELAKQ---ANVYLLEKNTDRQVLERFLEAF-------DQLMGVLGL----PFESV 420
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
EL +E+V LI+ER ARKN+DF+++D+IR L KGI L D + T
Sbjct: 421 -----------DELVDEEVDALIQERLDARKNRDFARADEIRDQLKAKGIVLEDTAQGTR 469
Query: 419 WR 420
W+
Sbjct: 470 WK 471
>gi|313891890|ref|ZP_07825492.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
gi|313119665|gb|EFR42855.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
Length = 481
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 230/421 (54%), Gaps = 20/421 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN + ++S RY Y M L P VS HM I DM+ +I
Sbjct: 75 KIINKANAEKSDWKTVSTRYIDAYFKVMDALHIRRADIYPYVSKHMGDIIDMVKTLIEKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYV+ DV++ + +Y +LSG+++E+ AG RV V++ KRNP DFALWK AK GEP
Sbjct: 135 HAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVNTAKRNPGDFALWKGAKPGEPF 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS HYL + FD HGGG DLIFPHHENEIAQS A V Y
Sbjct: 195 WESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIFPHHENEIAQSEGATGQKFVKY 254
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+FL+S HYRSPL++S +L+ A
Sbjct: 255 WLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYFLLSTHYRSPLDFSDERLEEAE 314
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHARMSDDLNTSHIL 299
+ L+D + ++ N + + + +EF M+DD NT +
Sbjct: 315 KNM----SKLKDVIARIKEMEKEDGKVETNESVSLKKAAARTIEEFRQAMNDDFNTG-LA 369
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
TG D +K IN N + ++ ++IE+ + K +L ILG+L +E
Sbjct: 370 TGVLFDFVKDINIYYNAVNSGVAIDKE-AVIEA----KETFKTILDILGILE----NEWN 420
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q L E ++ R ARK K + +D+IR L GI + D W
Sbjct: 421 IQESHAGSDYDALME----MILSVREIARKEKQYKLADEIRDKLAELGITVEDSATGARW 476
Query: 420 R 420
+
Sbjct: 477 K 477
>gi|386712445|ref|YP_006178767.1| cysteinyl-tRNA synthetase [Halobacillus halophilus DSM 2266]
gi|384072000|emb|CCG43490.1| cysteinyl-tRNA synthetase [Halobacillus halophilus DSM 2266]
Length = 466
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/424 (39%), Positives = 237/424 (55%), Gaps = 38/424 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE ++NR+ Y D+ L PRV+++M++I D + +I+
Sbjct: 74 KLIKAANELGEEVPDIANRFIDAYKEDVGALGVKEAVDHPRVTENMDEIIDFVKGLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F NYG+LS Q + R+G R+ V +K +P DF LWK AK E S
Sbjct: 134 YAYEAKGDVYFRTRSFDNYGKLSHQSVNELRSGARIEVGDKKEDPLDFTLWKEAKPDEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A S Y
Sbjct: 194 WESPWGNGRPGWHIECSAMAKKYLGETIDIHAGGQDLTFPHHENEIAQSEAHNDQSFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NEKMSKSLGNF + +++ P +R F++S YR P+N+S L A
Sbjct: 254 WMHNGYINIENEKMSKSLGNFILAHDLVKKHDPQVIRFFMLSVQYRHPINFSDELLKGAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKLRDEFHARMSDDLNTS 296
+ I ++ +H K+A +N + I +++F M DD NT+
Sbjct: 314 SSFDRIRNAYENL--------KHRKSASMNLQNDSDRWIKEIEAHKEQFIQEMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L Q +Q S++E+ EN +KE++ +LGL
Sbjct: 366 NAISVLF-DLTKSANLYL------QEEQTHTSVLETY---ENTLKELMMVLGL------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
E+ Q AEL +E+V LIEER ARK+++F ++DQIR +L + I L D +
Sbjct: 409 EIETQ--------AELLDEEVDALIEERKQARKDRNFERADQIRDELKDRNIILEDTSQG 460
Query: 417 TIWR 420
T W+
Sbjct: 461 TRWK 464
>gi|433497645|ref|ZP_20454670.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|433499690|ref|ZP_20456691.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|433501759|ref|ZP_20458738.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
gi|432231584|gb|ELK87243.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|432232373|gb|ELK88018.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|432232760|gb|ELK88396.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
Length = 473
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 235/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 HHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA-------------DPMPSEAGDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ L + K L L+ +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFE------------LAGEVNKTNNAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|289164517|ref|YP_003454655.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
gi|288857690|emb|CBJ11533.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
Length = 454
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 233/420 (55%), Gaps = 42/420 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ L+ +Y D L LPP +PR +DH+ I +I +++
Sbjct: 73 KIIARAHERAIPIDELTAQYIAAMNEDTQALNILPPDVEPRATDHIHSIIHLIERLLAKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ + GDV + V +YG+LS + LE AG RV + KR+P DF LWK AK GEP
Sbjct: 133 NAYLSDNGDVCYQVNSFADYGKLSNKDLEGLMAGARVEIVKEKRSPLDFVLWKKAKQGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L +FDIHGGG+DL FPHHENEIAQS AA + +
Sbjct: 193 SWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDLQFPHHENEIAQSEAATEKPFAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + NNEKMSKSLGNFFTI + ++HP +R+FL+S+HYRS LNYS L +A
Sbjct: 253 YWLHVGMLQVNNEKMSKSLGNFFTIADVLAKHHPEVVRYFLLSSHYRSSLNYSEENLANA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +YQT++D S F G+ N +EF+ M+DD NT L+
Sbjct: 313 KKALTRLYQTIKD-----SRFIADGELD----------NHWINEFNQAMNDDFNTPVALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
FQ L + K L +L+ + N + L L P ++ +
Sbjct: 358 VMFQ------------LSHEVNKSNSPILAATLKYLGNTMG-----LLLTDPSSFLQSGL 400
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+DKA + QLI ER AR +++ ++DQIRADL +GI L D T WR
Sbjct: 401 DDEDKA---------SIEQLINERLQARTERNWERADQIRADLLSRGIELEDGANGTTWR 451
>gi|377821178|ref|YP_004977549.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
gi|357936013|gb|AET89572.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
Length = 465
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 241/426 (56%), Gaps = 44/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E +L++R+ DM L +PR +D + Q+ MI + N
Sbjct: 75 KIIRRAVENNEPIKALTHRFIDAMHEDMDALGVARADIEPRATDFIPQMLGMIDALQANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV K +YG+LSG+ +E+ RAGERVA + K +P DF LWK AK GEP
Sbjct: 135 YAYHAKDGDVNYAVRKFADYGKLSGKSIEDLRAGERVAANDAKEDPLDFVLWKQAKPGEP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
WDS WG GRPGWHIECSAM L +FDIHGGG+DL FPHHENEIAQS A +
Sbjct: 195 VDSGWDSKWGRGRPGWHIECSAMGCTLLGDQFDIHGGGMDLQFPHHENEIAQSEGATGKT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V ++EKMSKSLGNFFTIR++ E++ +R F+ AHYRSPLNYS + +
Sbjct: 255 FVNYWMHNGFVQIDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIARAHYRSPLNYSDVHI 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A +A+ +Y L+D E + A+ F + M+DD NT
Sbjct: 315 DDAKNALTRLYTALKDVEPDNQQLDWNEANAQ--------------RFQSAMNDDFNTPV 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAY 355
++ F + S +N + +Q +KE+ +LGLL P A+
Sbjct: 361 AVSVLFD-----LASEVNRTRDSALARQ--------------LKELAGVLGLLQREPRAF 401
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-G 414
LQQ + LT +++ I ER AA++ K+++++D+IRA+L GIAL D G
Sbjct: 402 ---LQQAGGTGSQEG-LTPQEIEAKIAERIAAKQAKNYAEADRIRAELLEAGIALEDKPG 457
Query: 415 KETIWR 420
T WR
Sbjct: 458 GSTEWR 463
>gi|333896167|ref|YP_004470041.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111432|gb|AEF16369.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 464
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 243/419 (57%), Gaps = 28/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+R+++ L++RY +EY D L T+ PR ++++++I + + ++I+
Sbjct: 72 KLIKRSHEENTTVKELADRYIEEYFKDADSLGIKRATFHPRATENIKEIIEFVKKLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +G+V++ K +YG+LS + ++ +AG R+ V+ K+NP DF LWKAAK GEP
Sbjct: 132 FAYEKDGNVYYDTTKFKDYGKLSHKNIDELKAGARIEVNEDKKNPTDFVLWKAAKEGEPY 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS +L DIH GG DLIFPHHENEIAQS AA Y
Sbjct: 192 WDSPWGKGRPGWHIECSTMSTKFLGKTLDIHAGGPDLIFPHHENEIAQSEAANDAEFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G++ NNEKMSKS NFFT+R + +Y P LR F++ +HYR+P+NYS ++ A
Sbjct: 252 WMHIGYLNINNEKMSKSKNNFFTVRDVISQYDPEVLRFFMLMSHYRNPINYSQDLIEQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + T+ + + L E + + A ++ + R +F M DD NT+ ++
Sbjct: 312 NGYLRLSNTVYNLQHLLD-VAEDRQLSDEEKAYKEKYEEYRRKFEEAMDDDFNTADAISV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ ++ INS+++ PK+ LI+ + + + VL I
Sbjct: 371 IFE-MVRDINSNID---GNSPKE----LIKYILDVFLNLSSVLGI--------------- 407
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
K+ EL ++++ +LIE+R ARK K+++++D+IR +L ++GI L D W+
Sbjct: 408 ----TYKKKELLDDEIKELIEKRQEARKAKNWAEADRIRDELKKQGIVLEDTPNGVRWK 462
>gi|423692284|ref|ZP_17666804.1| cysteine--tRNA ligase [Pseudomonas fluorescens SS101]
gi|388002211|gb|EIK63540.1| cysteine--tRNA ligase [Pseudomonas fluorescens SS101]
Length = 460
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 230/420 (54%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ R D A L L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWKA K GEP
Sbjct: 133 YAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDFVLWKATKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSAINYSEDNLKDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A++P AR F M+DD T
Sbjct: 313 KGALERFYHALKGLP-AVAPAGGEAFVAR---------------FTEVMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ I++ + +KE+ +LG+L E
Sbjct: 357 VLFE-----MVREINRLRETD--------IDAAAGLAARLKELASVLGVLQ----MEADD 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ A R + E D LI+ R AAR NKD+++SD+IR LT G+ L D T WR
Sbjct: 400 FLQAGAEGRVDAAEVDA--LIQARLAARSNKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|294791947|ref|ZP_06757095.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
gi|294457177|gb|EFG25539.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
Length = 482
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 243/428 (56%), Gaps = 33/428 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G + +++NRY Y M L PRVS H++ I MI +I+
Sbjct: 75 KIINTSNGEGVSWDTIANRYIDSYFEVMDVLGVQRADIYPRVSTHIDDIIAMIQTLIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD RK+NP DFALWKAAK GEP
Sbjct: 135 YAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKHGEPY 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIFPHHENEIAQS C+ Q V
Sbjct: 195 WESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSG-QHPAV 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 254 RYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEE 313
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL-------RDEFHARMSDD 292
A+ ++L+ A+ + P + D +L +EF MSDD
Sbjct: 314 AN-------KSLERLSTAIENLL---YLEKCEPGSCDEAQRLLEKAKAYEEEFEDAMSDD 363
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT+ + F A +N+ + ++ + E++ +++ K + ++G+L
Sbjct: 364 FNTALATSSMFGLA-----KEINIYYQAVTSREGVVCQEAIAEVKRIFKFMTDVIGVLE- 417
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+ + A EE + ++ R A R+ K ++ +D IR L GI + D
Sbjct: 418 -------KAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIGITIED 470
Query: 413 MGKETIWR 420
+ W+
Sbjct: 471 SPQGARWK 478
>gi|443635010|ref|ZP_21119181.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443345201|gb|ELS59267.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 466
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 229/424 (54%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++S+R+ + Y D+ L C PRV ++M+ I + + Q++
Sbjct: 74 KLIKAANELGEDVPTISDRFIKAYFEDVGALGCRKADLHPRVMENMDAIIEFVDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-----INKLRDEFHARMSDDLNTS 296
A + A S Q H + N +D + + R F M DD NT+
Sbjct: 314 SA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDGQWLEKVEEQRKAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L K + IE +I + +LG
Sbjct: 366 NAISVLF-DLAKHANYYLQ--KDHTADHVIKAFIEMFDRI-------VSVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|326790451|ref|YP_004308272.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
gi|326541215|gb|ADZ83074.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
Length = 472
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/416 (38%), Positives = 243/416 (58%), Gaps = 31/416 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G + + +Y +E L D+ +L P T+ PRV++ M++I +MI ++I
Sbjct: 73 KIIKKANEEGRSTNEVVTQYIEETLKDVNNLNVTPATHHPRVTEEMDRIIEMIKELIEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAGE 119
AY + G V+F YG+LS + LE AG ERVA+ K+N DF LWK K GE
Sbjct: 133 YAYEINGTVYFDTAAFEQYGKLSKKVLEELEAGRSERVALTEEKKNHMDFVLWKPKKEGE 192
Query: 120 PSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNV 179
P W+SPW GRPGWHIECSAM+ YL DIH GG DL+FPHHENEIAQS A
Sbjct: 193 PYWESPWSNGRPGWHIECSAMAKRYLGDTIDIHAGGEDLVFPHHENEIAQSECANGKEFA 252
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YWMHN + +N+KMSKSLGNF T+R + E Y +R F+++AHYRSPLN+S ++S
Sbjct: 253 HYWMHNAFLNIDNKKMSKSLGNFKTLRDVGEMYGYDVVRFFMLNAHYRSPLNFSAELIES 312
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFHARMSDDLNTS 296
A +++ + +++ + LS EH + A + + + +L D FH M DD NT+
Sbjct: 313 AKNSL----ERIKNAKATLSFALEHSQIADLTEEEKALLKELDDFKARFHEHMEDDFNTA 368
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
++ F+ +KF N+ K+ Q +E++ K+ NE+ + ILGL+
Sbjct: 369 DAISIIFE-LVKFANTY-----AKEGASQ--PFVEAVLKLFNELTD---ILGLI------ 411
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
K L++E++ + IE+R AA+K +DF+++D+IR L +G+ + D
Sbjct: 412 -----YDRKGNNEDGLSDEEIKEYIEKRTAAKKARDFAEADRIRDFLKDQGVLIED 462
>gi|163783157|ref|ZP_02178151.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881491|gb|EDP75001.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 489
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 242/426 (56%), Gaps = 17/426 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + + ++++NRY Y DM ++ P +PRV++HM++I D+I +I
Sbjct: 72 KIINRAKEECTDFMTIANRYIASYYRDMEAIRVKPADVEPRVTEHMKEIVDVIQSLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+V +YG+LS + E AG RV +KR+P DFALWK+AKAGEPS
Sbjct: 132 YAYESDGDVYFSVRSFKDYGKLSKRSPEEMEAGARVEPSEKKRDPLDFALWKSAKAGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWH EC AM +L DIHGGG+DL+FPHHENEIAQ+ A Y
Sbjct: 192 WDSPWGKGRPGWHTECVAMIFKHLGETIDIHGGGLDLVFPHHENEIAQAEAVTGKPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG VT +KMSKSLGN+ T+++I +YHP LR ++ HYRSPL++S +++
Sbjct: 252 WMHNGLVTVGGQKMSKSLGNYVTLKEIYTKYHPDILRLLVLFTHYRSPLDFSWEKMEETQ 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A + ++D EV L + +P D + ++ + F +SDD NT L+
Sbjct: 312 RAYDRLKGAIEDYEV-LKELEVIPGKGGAHPLY-DKVKEVEESFFESLSDDFNTPEALSH 369
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIE------SLRKIENEVKEVLRILGLLPPGAY 355
F + S L +K + + ++ E + R + N +K++ +L L P
Sbjct: 370 IFS-----LVSELGKVKNRTYSEGKIDESELGAYEYASRFLLNTLKKIFGLLEDLYPEC- 423
Query: 356 SEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
++++ ++ L+ E+ + ++ LIE R AR+ K F +D IR L GI L D
Sbjct: 424 --EVRRVVERELEAGEVLDTKLVDLLIEVRTLARQEKQFRIADLIRDRLKELGIELEDTP 481
Query: 415 KETIWR 420
T W+
Sbjct: 482 AGTRWK 487
>gi|423565552|ref|ZP_17541828.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A1]
gi|401193754|gb|EJR00757.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A1]
Length = 465
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 246/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ +++NR+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIANRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + I K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLVE------IEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELTQEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKGRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|260772517|ref|ZP_05881433.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
gi|260611656|gb|EEX36859.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
Length = 397
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 240/420 (57%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA++ E+ SL+ R QE D L L P +PR + ++E+I ++ ++I+
Sbjct: 10 KIIKRASENQESCDSLTERLIQEMYTDFDALNILRPDVEPRATAYIEEIIALVERLIDRG 69
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V K YGRLS Q L +AG RV +++ KR+P DF LWK +K GEP
Sbjct: 70 FAYVADNGDVMFEVSKFKEYGRLSKQDLTQLQAGARVDIETAKRSPLDFVLWKMSKPGEP 129
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 130 TWQSPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQYVN 189
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + + Y P +R+FL+S HYRS LNYS L A
Sbjct: 190 TWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDPETVRYFLMSGHYRSQLNYSEENLTQA 249
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ ++ ++ E+ +++ F + M+DD NT +
Sbjct: 250 RASLERLYTALRGLDMTVAA-----------AGGEEYVSR----FTSAMNDDFNTPEAYS 294
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D + +N + K Q S + +L ++E+ ++G+L Y E +
Sbjct: 295 VLF-DMAREVN------RLKTEDMLQASALGAL------MRELADVIGIL----YQEPER 337
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ + E++ LI+ R +R NKD++ +D R LT GI L D T WR
Sbjct: 338 FLQSSVANDDQ--AEEIEALIKLRNDSRANKDWANADLARHKLTEMGIILEDGPNGTTWR 395
>gi|422009692|ref|ZP_16356675.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
gi|414093510|gb|EKT55182.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
Length = 462
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 175/429 (40%), Positives = 236/429 (55%), Gaps = 51/429 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ L+ R E D L L P +PR + H+ +I ++ +I
Sbjct: 73 KIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIGEIIELTQSLIERG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V+ PNYG LS Q LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVADVKRNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS LNY+ L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQLNYTEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTS 296
A+ +Y L+ + + P DEF AR M+DD NT
Sbjct: 313 RTALERMYTALRGTDKSAVPAGG-------------------DEFKARFIEAMNDDFNTP 353
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ F D ++ +N + K + +S ++ +++E+ +LGL
Sbjct: 354 EAYSVLF-DMVREVN---------RLKSEDMSAANAMAA---QLRELAGVLGL------- 393
Query: 357 EVLQQLKDKALKRAELTEED-----VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
L+Q + LK TE+D + LI++R AR+NKD++++D R +LT G+ L
Sbjct: 394 --LEQDPESFLKGGAQTEDDAEVAKIEALIQQRLDARQNKDWAQADAARDELTAMGVVLE 451
Query: 412 DMGKETIWR 420
D T WR
Sbjct: 452 DGATGTTWR 460
>gi|385340928|ref|YP_005894800.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|416180165|ref|ZP_11611350.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|416185171|ref|ZP_11613345.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|416193715|ref|ZP_11617271.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|416209140|ref|ZP_11621220.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|421543337|ref|ZP_15989432.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|433468080|ref|ZP_20425527.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|433470229|ref|ZP_20427634.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|433493523|ref|ZP_20450604.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|433495574|ref|ZP_20452632.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|433503920|ref|ZP_20460871.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
gi|254671915|emb|CBA04234.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha275]
gi|325131324|gb|EGC54035.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|325133259|gb|EGC55925.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|325137353|gb|EGC59941.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|325141357|gb|EGC63840.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|325199172|gb|ADY94628.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|402314983|gb|EJU50550.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|432200763|gb|ELK56852.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|432200991|gb|ELK57078.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|432225583|gb|ELK81324.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|432227143|gb|ELK82855.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|432238194|gb|ELK93770.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
Length = 473
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 253 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ T +P + +
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKN-------------TPPADPMPSEADDDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ L + K L L+ +
Sbjct: 360 FYVAMNDDFDTVKAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 402 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLN 455
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 456 EHKIILEDNAGGTTWR 471
>gi|163751990|ref|ZP_02159201.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
gi|161328148|gb|EDP99315.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
Length = 459
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 235/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ SL+ R E D L P ++PR + HM +I DM+ ++I +
Sbjct: 73 KIIKRAAENNESCKSLTERLIGEMHRDFDALNMKRPDFEPRATQHMPEIIDMVEKLIEKE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F+V YGRLSGQ +E +AG RV V+ KR+P DF LWK +K GEP
Sbjct: 133 YAYVSDNGDVLFSVSSFAEYGRLSGQNIEQLQAGARVEVEDTKRDPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMIDKEKMSKSLNNFFTIRDVLKHYDAGTIRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ ++ + P A+E + +F A M DD NT +
Sbjct: 313 KSALDRLYTSLKGLDLNVEPAD----------ASEFVV-----KFKAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K Q S + ++KE+ +LGL L
Sbjct: 358 VLF-DMVREIN------RVKGSDLAQASAMGV------KLKELAGVLGL---------LD 395
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q D K E ++++V Q LI ER AR KD+ +D R L G+ L D T
Sbjct: 396 QDVDIFFK-GEGSDDEVAQIEALIVERNRARAEKDWPAADVARDGLNALGVILEDGPSGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|423062587|ref|ZP_17051377.1| cysteinyl-tRNA synthetase [Arthrospira platensis C1]
gi|406715922|gb|EKD11074.1| cysteinyl-tRNA synthetase [Arthrospira platensis C1]
Length = 486
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 244/428 (57%), Gaps = 25/428 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+ RA + ++S R+ Y D+ L PRV+DH+++I +I Q+
Sbjct: 74 KILNRAKEQESTMEAVSQRFIDAYFEDLRRLNVRDAKAYPRVTDHIKEIHQLIDQLTATG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----RKRNPADFALWKAA 115
AY V+GDV++ V P+YG+LS ++LE+ + G RVAV +K+NPADFALWKAA
Sbjct: 134 HAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLKKKNPADFALWKAA 193
Query: 116 KAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ 175
K GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPHHENEIAQS AA
Sbjct: 194 KPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPHHENEIAQSEAATG 253
Query: 176 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFLISAHYRSPLNYSV 234
+ YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F++ HYR PL+++
Sbjct: 254 KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFILQGHYRKPLDFTD 313
Query: 235 LQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINKLRDEFHARMSDDL 293
+ SA + ++TL+D + + G +A +P+ D F M DD
Sbjct: 314 EAIASAKNG----WETLKDGLLFAEQYGARLGWSADSSPSKYDTTEDALQRFRVAMDDDF 369
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPG 353
NT L F+ A K + N+L + I + K + E+ + GL
Sbjct: 370 NTPGGLAVLFELA-KELRRQGNLLAHEGKTDTPSDRIYATWKT---LVELAGVFGL---- 421
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
E + Q + A + +++ ++ L+++R +ARK K++++ D+IR L G+ L+D
Sbjct: 422 ---EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARKAKNYAEGDRIRDQLQANGVTLIDR 477
Query: 414 -GKETIWR 420
G ET+WR
Sbjct: 478 PGGETLWR 485
>gi|209527155|ref|ZP_03275668.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|376001627|ref|ZP_09779490.1| cysteinyl-tRNA synthetase [Arthrospira sp. PCC 8005]
gi|209492404|gb|EDZ92746.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|375330014|emb|CCE15243.1| cysteinyl-tRNA synthetase [Arthrospira sp. PCC 8005]
Length = 486
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 244/428 (57%), Gaps = 25/428 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+ RA + ++S R+ Y D+ L PRV+DH+++I +I Q+
Sbjct: 74 KILNRAKEQESTMEAVSQRFIDAYFEDLRRLNVRDAKAYPRVTDHIKEIHQLIEQLTATG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----RKRNPADFALWKAA 115
AY V+GDV++ V P+YG+LS ++LE+ + G RVAV +K+NPADFALWKAA
Sbjct: 134 HAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLKKKNPADFALWKAA 193
Query: 116 KAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ 175
K GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPHHENEIAQS AA
Sbjct: 194 KPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPHHENEIAQSEAATG 253
Query: 176 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFLISAHYRSPLNYSV 234
+ YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F++ HYR PL+++
Sbjct: 254 KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFILQGHYRKPLDFTD 313
Query: 235 LQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINKLRDEFHARMSDDL 293
+ SA + ++TL+D + + G +A +P+ D F M DD
Sbjct: 314 EAIASAKNG----WETLKDGLLFAEQYGARLGWSADSSPSKYDTTEDALQRFRVAMDDDF 369
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPG 353
NT L F+ A K + N+L + I + K + E+ + GL
Sbjct: 370 NTPGGLAVLFELA-KELRRQGNLLAHEGKTDTPSDRIYATWKT---LVELAGVFGL---- 421
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
E + Q + A + +++ ++ L+++R +ARK K++++ D+IR L G+ L+D
Sbjct: 422 ---EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARKAKNYAEGDRIRDQLQANGVTLIDR 477
Query: 414 -GKETIWR 420
G ET+WR
Sbjct: 478 PGGETLWR 485
>gi|86157699|ref|YP_464484.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
gi|109894880|sp|Q2IQG7.1|SYC_ANADE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|85774210|gb|ABC81047.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 481
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 181/425 (42%), Positives = 249/425 (58%), Gaps = 25/425 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+P++L++R+ + DM L L P +PRVS H+ +I +I +++
Sbjct: 74 KIIQRANERGEDPIALASRFADAFHEDMDALGNLRPDVEPRVSGHIPEIVALIARLVERG 133
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV K P YGRLS + L++ AG RV KR+P DFALWKAAK GEP
Sbjct: 134 FAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEPGEAKRDPLDFALWKAAKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS--- 177
+WDSPWG GRPGWHIECSAM+ +L + D+H GG DL+FPHH NEIAQS AA D
Sbjct: 194 AWDSPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLVFPHHTNEIAQSVAATSDGLHA 253
Query: 178 --NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVL 235
YWMHNG V ++EKMSKSLGNFFTIR + R+ ALR FL+ HYR N+S
Sbjct: 254 EDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLARFDGEALRFFLLGTHYRRDFNFSDQ 313
Query: 236 QLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNT 295
L A + +Y+T++ E A + P AE + A + DD NT
Sbjct: 314 VLAEAERRLSALYETVEKAERL---------GAGVEPGAEPA---FVERARAALDDDFNT 361
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+L G +A N+ + KK P+++ + + + + V VL ILG P
Sbjct: 362 PQVL-GIVAEAFTEANALADRKGKKSPEEK--ARLAAFARGARAVGAVLGILGRPP---- 414
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
++ L ++D+A R + +V +LI ERAAAR KDF++SD IR L +G+ LMD +
Sbjct: 415 AQALSAIRDRAAARRGIDGSEVERLIAERAAARAAKDFARSDAIRDGLLARGVVLMDGPQ 474
Query: 416 ETIWR 420
T W+
Sbjct: 475 GTTWK 479
>gi|291567546|dbj|BAI89818.1| cysteinyl-tRNA synthetase [Arthrospira platensis NIES-39]
Length = 486
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 246/431 (57%), Gaps = 31/431 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+ RA + +S R+ Y D+ L PRV+DH+++I +I +
Sbjct: 74 KILNRAKEHDSTMEEVSQRFIDAYFEDLRRLNVRDANAYPRVTDHIQEIHQLIDTLTATG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----RKRNPADFALWKAA 115
AY V+GDV+++V P+YG+LS ++LE+ + G RVAV +K+NPADFALWKAA
Sbjct: 134 HAYAVDGDVYYSVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLKKKNPADFALWKAA 193
Query: 116 KAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ 175
K GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPHHENEIAQS AA
Sbjct: 194 KPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPHHENEIAQSEAATG 253
Query: 176 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFLISAHYRSPLNYSV 234
+ YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F++ HYR PL+++
Sbjct: 254 KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFILQGHYRKPLDFTD 313
Query: 235 LQLDSASDAVFYIYQTLQDCEVALSPFQEHGK----TARINPAAEDCINKLRDEFHARMS 290
+ SA++ ++TL+D L Q++G + +P D F M
Sbjct: 314 EAIASANNG----WETLKD---GLLFAQQYGAPLGWSDDSSPGKYDTTEDALQRFRVAMD 366
Query: 291 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 350
DD NT L F+ A K + N+L + Q I ++ K + E+ + GL
Sbjct: 367 DDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTQSDRIYAIWKT---LVELAGVFGL- 421
Query: 351 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
E + Q + A + +++ ++ L+++R +ARK K++++ D+IR L G+ L
Sbjct: 422 ------EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARKAKNYAEGDRIRDQLQASGVTL 474
Query: 411 MDM-GKETIWR 420
+D G ET+WR
Sbjct: 475 IDRPGGETLWR 485
>gi|16077162|ref|NP_387975.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221307906|ref|ZP_03589753.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221312227|ref|ZP_03594032.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317161|ref|ZP_03598455.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321424|ref|ZP_03602718.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|402774337|ref|YP_006628281.1| cysteinyl-tRNA synthetase [Bacillus subtilis QB928]
gi|452916597|ref|ZP_21965219.1| cysteine--tRNA ligase [Bacillus subtilis MB73/2]
gi|549024|sp|Q06752.1|SYC_BACSU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|289284|gb|AAA21798.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
gi|467482|dbj|BAA05328.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
gi|499303|emb|CAA52167.1| cysteine--tRNA ligase [Bacillus subtilis subsp. subtilis str. 168]
gi|2632361|emb|CAB11870.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|402479523|gb|AFQ56032.1| Cysteinyl-tRNA synthetase [Bacillus subtilis QB928]
gi|407955785|dbj|BAM49025.1| cysteinyl-tRNA synthetase [Bacillus subtilis BEST7613]
gi|407963056|dbj|BAM56295.1| cysteinyl-tRNA synthetase [Bacillus subtilis BEST7003]
gi|452114506|gb|EME04906.1| cysteine--tRNA ligase [Bacillus subtilis MB73/2]
Length = 466
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 228/424 (53%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+ I + + Q++
Sbjct: 74 KLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMDAIIEFVDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
A + A S Q H + N +D + + R F M DD NT+
Sbjct: 314 SA-------FSRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRKAFEEEMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L K + IE +I + +LG
Sbjct: 366 NAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI-------VSVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|304388715|ref|ZP_07370773.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
gi|304337279|gb|EFM03455.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
Length = 699
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 299 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 358
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 359 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 418
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 419 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 478
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 479 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 538
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ T +P + +
Sbjct: 539 HYRSPLNYSDAHLDDAKGALTRLYTTLKN-------------TPPADPMPSEADDDYTRR 585
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ L + K L L+ +
Sbjct: 586 FYVAMNDDFDTVKAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 627
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 628 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLN 681
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 682 EHKIILEDNAGGTTWR 697
>gi|296113612|ref|YP_003627550.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|416218561|ref|ZP_11624975.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|416234182|ref|ZP_11629731.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|416238906|ref|ZP_11631589.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|416243700|ref|ZP_11634035.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|416247920|ref|ZP_11636012.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|416255849|ref|ZP_11639418.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|421780418|ref|ZP_16216907.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295921307|gb|ADG61658.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BBH18]
gi|326559609|gb|EGE10023.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|326565528|gb|EGE15699.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|326567711|gb|EGE17817.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|326568652|gb|EGE18723.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|326568779|gb|EGE18849.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|326575029|gb|EGE24958.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|407812574|gb|EKF83359.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
Length = 480
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 242/422 (57%), Gaps = 28/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA D GE L++R+ D L C P +PR ++H+E ++ +I ++ +
Sbjct: 82 KIIQRAYDNGETITELTDRFITAMHQDEQFLGCQSPNIEPRATEHIENMQHLIDVLLTKN 141
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY G DV++A+EK PNYG+LS + +++ +AG ERV+ KR+P DF LWK AK
Sbjct: 142 LAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASERVSTAEDKRHPFDFVLWKTAKPS 201
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A +
Sbjct: 202 EPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGHDLQFPHHENEIAQSEGATGKTY 261
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
++WMH G + + EKMSKSLGNFFTIR++ +++HP +R FL+S+HYRSP+N+S L
Sbjct: 262 ANHWMHMGFINIDGEKMSKSLGNFFTIREVVDKFHPETIRFFLLSSHYRSPVNFSDTALK 321
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ A+ IYQ+L+ E+ I P A + ++ F M+DD NT
Sbjct: 322 ESHTALSRIYQSLKSA--------ENFGVISIMPNAWE--SEAGQAFAKAMNDDFNTPKA 371
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F + IN ++ + Q Q+ S +++L + N + + E
Sbjct: 372 VSVLF-SVVTEINRAMKA-GEYQKATQEASTLKTLASVLN-----------IAQSSPHEF 418
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ + K L++ ++ I +R A+ K+F+K+D IR +L R+GI L D T
Sbjct: 419 LQ--ANIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELEDGRMGTT 476
Query: 419 WR 420
WR
Sbjct: 477 WR 478
>gi|416052811|ref|ZP_11578446.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347991603|gb|EGY33066.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 469
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 234/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D L L P ++PR + H+ +I D++ ++I
Sbjct: 83 KIIKRALENKETCDQLVDRIVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVQKLIQRR 142
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 143 HAYVADNGDVMFDVESFKGYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEP 202
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A + V+
Sbjct: 203 SWDSPWGKGRPGWHIECSAMNGKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGNQYVN 262
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS LNYS L+ A
Sbjct: 263 YWLHSGMIMVDKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQLNYSEENLNLA 322
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + D F M DD NT + L+
Sbjct: 323 HGALERLYTALRGTDKSAVAF-----------GGENFV----DTFREAMDDDFNTPNALS 367
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A LN LK + + + ++E+ ILGLL
Sbjct: 368 VLFEMA-----RELNKLKTED--------MAKANGLAARLRELAAILGLL---------- 404
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
QL + +A E++V + LI++R AR KD++ +D R LT GI L D T
Sbjct: 405 QLDPEQFLQAGSNEDEVAKIEALIKQRNEARAAKDWAVADAARNALTEMGIVLEDGPNGT 464
Query: 418 IWR 420
WR
Sbjct: 465 TWR 467
>gi|345872177|ref|ZP_08824115.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
gi|343919258|gb|EGV30008.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
Length = 463
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 237/422 (56%), Gaps = 37/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE L+ R+ Q D L LPP+ +PR + HM +I M+ +++
Sbjct: 73 KIIRRAAENGETFQELTERFIQAMREDGDALGVLPPSQEPRATGHMSEILAMVETLVDKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV++AV + YG+LSG+ ++ RAG RV + KR+P DFALWK+AK GEP
Sbjct: 133 MAYVADNGDVYYAVGQFTGYGKLSGKDPQDLRAGARVEIGESKRDPLDFALWKSAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS A + V+
Sbjct: 193 AWESPWGMGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQSEGATGEPFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V N EKMSKSLGNFFT+R+I +RY +R+F++++HYRSPLNY L +A
Sbjct: 253 VWMHNGFVRVNEEKMSKSLGNFFTVREILQRYQAEEVRYFILTSHYRSPLNYDDENLQNA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ F E R+ F A M DD NT L
Sbjct: 313 RGALTRLYTALRGLPEVEPAFGE----------------TYRERFSAAMDDDFNTPVALA 356
Query: 301 GAFQDALKFIN--SSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
F D ++ IN +M + + L E L ++ + + LR G S
Sbjct: 357 VLF-DLVREINRVRPTDMARAAALGAELRRLGEMLGILQGDAEVYLR-------GGPSST 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L D ++ LI+ER AR ++D++ +D+IR +L G+ L D + T
Sbjct: 409 EDDLSDARIE----------ALIQERTQARADRDWAAADRIRKELADAGVQLDDGPQGTT 458
Query: 419 WR 420
WR
Sbjct: 459 WR 460
>gi|420155520|ref|ZP_14662380.1| cysteine--tRNA ligase [Clostridium sp. MSTE9]
gi|394759006|gb|EJF41818.1| cysteine--tRNA ligase [Clostridium sp. MSTE9]
Length = 467
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 244/422 (57%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR+AN+ + L++S +Y +EY D L P T P ++ ME I +I ++
Sbjct: 72 KIIRKANEEETDYLTVSRKYIEEYKTDAKGLNVRPATVHPLATESMEDILQIIQTLVEKG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F +K YG+LS Q L++ +AG R++VD K + DFA+WK+AK GEP
Sbjct: 132 YAYAAPNGDVYFRTKKFDEYGKLSHQPLDDLQAGARISVDEVKEDAMDFAVWKSAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAM+ H+L + DIH GG DLIFPHHENEIAQS
Sbjct: 192 SWDSPWGKGRPGWHIECSAMARHFLGNTIDIHCGGQDLIFPHHENEIAQSECCNGVPFAH 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG++ +N KMSKSL NFFT+R++ Y +R ++S+ YRSP+NYS+ ++
Sbjct: 252 YWMHNGYINVDNHKMSKSLNNFFTVREVANVYGYEPIRFLMVSSQYRSPINYSIEIIEQC 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSHI 298
A+ +Y +C L+ +++ + E D ++ R F M DDLNT+
Sbjct: 312 KSALDRLY----NCRDNLTFARDNAPEGLKDGEQEQIDALDSFRQRFITAMDDDLNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F D + IN++L P ++ L + K+ E+ +V LGL
Sbjct: 368 ISVLF-DLAREINTNL------IPGEKSKELYNAALKLYGELADV---LGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L Q KD++L +E++ LI++R ARKNKD++ +D+IR +L + + L D +
Sbjct: 409 LYQRKDQSL------DEEIEALIQQRTDARKNKDWATADRIRDELKARHVVLEDTPQGIK 462
Query: 419 WR 420
W+
Sbjct: 463 WK 464
>gi|395649608|ref|ZP_10437458.1| cysteinyl-tRNA ligase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 462
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 232/420 (55%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ R D A L L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGESFDALTARMIAAMHEDEARLNILKPDMEPRATDHIPGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWK K GEP
Sbjct: 133 YAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDFVLWKGTKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSAINYSEDNLKDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A++P AR F M+DD T
Sbjct: 313 KGALERFYHALKGLP-AVAPAGGEAFVAR---------------FTEVMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ S +++ + +KE+ +LG+L E
Sbjct: 357 VLFE-----MVREINRLRE--------SDLDAAAGLAARLKELASVLGVLQ----MEADD 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ A R + TE D LI+ R AAR NKD+++SD+IR LT G+ L D T WR
Sbjct: 400 FLQAGAEGRVDATEVDA--LIQARLAARVNKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|374307676|ref|YP_005054107.1| cysteine--tRNA ligase [Filifactor alocis ATCC 35896]
gi|291166310|gb|EFE28356.1| cysteine--tRNA ligase [Filifactor alocis ATCC 35896]
Length = 466
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 244/422 (57%), Gaps = 33/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ G +PL ++++Y +EY VD L + PRV++ +E I + I ++I
Sbjct: 72 KIINRANEEGISPLEVADKYIKEYFVDADGLGIRRASVHPRVTECIEDIIEFIEELIQKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV++ + YG+LS Q +E AG R+ VD RK++P+DFALWK K GE
Sbjct: 132 HAYEIDGDVYYDTKSFDGYGKLSRQNMEELNAGARIDVDDRKKSPSDFALWKKKKEGEIG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS Y
Sbjct: 192 WISPWGEGRPGWHIECSVMSRKYLGDTIDIHSGGQDLIFPHHENEIAQSEGRSGKEFAHY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ NN+KMSKSL NFFT+R+I+E +R FL+SA YR+P+N+S LD+A
Sbjct: 252 WLHNGYININNQKMSKSLNNFFTVREISEVIDLEIVRFFLLSAQYRNPVNFSQDLLDAAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
+ +Y T E L Q I ++ ++KL R+ F M DDLNT+
Sbjct: 312 SGMERLYNTKHKVEFLLEQAQ-----GMIKEDEKEFVSKLPSYRELFIEAMDDDLNTADG 366
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ + KFIN++++ K+ Q+ +++ L + N +
Sbjct: 367 ISAIFELS-KFINTTVSEKSSKEYLQECMNIFCELTNVLN-------------------I 406
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+Q+ K E+ + +LIE+R+ A+K K+F+++D+IR L G+ ++D + T
Sbjct: 407 IQKKKSDG-----FDEDKINELIEQRSLAKKEKNFAEADRIRGQLHDMGVEVLDTRQGTT 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|374335348|ref|YP_005092035.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
gi|372985035|gb|AEY01285.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
Length = 459
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 180/423 (42%), Positives = 235/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ +L+ R E D L P +P+ + H+ +I M+ +I +
Sbjct: 73 KIIKRAAENGESCDALTERLTAEMYRDFDALNIARPDIEPKATGHIPEIIAMVDTLIKDG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V +YGRLSGQ LE +AG RV V+ KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVLFEVNSFADYGRLSGQNLEQLQAGARVEVEQSKRNPLDFVLWKQSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWGPGRPGWHIECSAM+ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 SWDSPWGPGRPGWHIECSAMNGKHLGKHFDIHGGGSDLQFPHHENEIAQSCCANHSPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDQEKMSKSLGNFFTIRDVLKHYDGETIRYFLLSGHYRSQLNYSDENLKQA 312
Query: 241 SDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A+ +Y L+D EVA + ED + + F A M DD NT
Sbjct: 313 RTALERLYTALRDLPEVAAA-------------GGEDFVAR----FTAAMDDDFNTPEAY 355
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSE 357
+ F + +N K K + + ++E+ +LGLL P A+
Sbjct: 356 SVLFD-----LAREINRQKGKDDA--------AAAGLGGRLRELAGVLGLLTQEPEAF-- 400
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
L+ A E+ D+ +LI+ R AR+NKD++ +D R LT GI L D + T
Sbjct: 401 ----LRGDAGADDEVA--DIERLIQARLDARQNKDWAAADAARDQLTAMGIVLEDGPEGT 454
Query: 418 IWR 420
WR
Sbjct: 455 RWR 457
>gi|388456175|ref|ZP_10138470.1| cysteinyl-tRNA ligase [Fluoribacter dumoffii Tex-KL]
Length = 454
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 240/423 (56%), Gaps = 48/423 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA++ L+ +Y D L LPP +PR ++H+E I +I +++
Sbjct: 73 KIIARAHERAIPIDDLTAQYIAAMNEDTKALNILPPDVEPRATEHIESIIRLIERLLEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ + GDV + V+ +YG+LS + LE AG RV V KR+P DF LWK AK GEP
Sbjct: 133 NAYLSDNGDVCYQVDSFADYGKLSHKDLEGLVAGARVEVVKEKRSPLDFVLWKKAKQGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L +FDIHGGG+DL FPHHENEIAQS AA + +
Sbjct: 193 SWPSPWGEGRPGWHIECSAMAMGELGEQFDIHGGGLDLQFPHHENEIAQSEAATEKPFAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G + NNEKMSKSLGNF+TI + ++HP +R+FL+S+HYRS LNYS L ++
Sbjct: 253 YWLHVGMLQVNNEKMSKSLGNFYTIADVLAKHHPEVVRYFLLSSHYRSSLNYSEENLLNS 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +YQ L+D +V P E N EF+ M+DD NT L+
Sbjct: 313 RKALARLYQALKDSQVI--------------PDGE-MDNHWISEFNQAMNDDFNTPVALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
FQ + + IN S +++ + N +K + I+G+L
Sbjct: 358 VLFQLSHE-INKSRSVI------------------LANTLKYLAGIMGIL---------- 388
Query: 361 QLKDKALKRAELTEED---VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q + ++ EED + +LI ER AR +K++ ++DQIRADL ++GI L D T
Sbjct: 389 QEDPASFLQSGFAEEDKTEIEELIAERLQARADKNWGRADQIRADLLKRGIELEDGPNGT 448
Query: 418 IWR 420
WR
Sbjct: 449 TWR 451
>gi|226309785|ref|YP_002769679.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
gi|254765181|sp|C0ZIF7.1|SYC_BREBN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226092733|dbj|BAH41175.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
Length = 468
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 236/425 (55%), Gaps = 38/425 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR AN G +++RY Y D+ L PP QPRV + +I + + +I
Sbjct: 74 KLIRVANQEGVTVKEVADRYTDAYNADLKSLNVSPPDIQPRVMQTIPEIIEFVQGLIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F + YG+LS Q L++ +AG RV ++ +K +P DF LWKAAK GE +
Sbjct: 134 FAYESEGDVYFRTGRFQEYGKLSHQPLDDLQAGARVEINEKKEHPLDFVLWKAAKTGEVT 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ +L + DIH GG DL+FPHHENEIAQS Y
Sbjct: 194 WDSPWGEGRPGWHIECSAMALKFLGEEIDIHAGGTDLVFPHHENEIAQSECFTGKVFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYS---VLQLD 238
W+HNG + +NEKMSKSLGNF R ++E++ +R F++ HYR+P+N+S + Q
Sbjct: 254 WLHNGMLNIDNEKMSKSLGNFLLARDLSEKFGGQLIRFFMLQGHYRNPINFSEELIEQAA 313
Query: 239 SASDAVFYIYQTLQ---DCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNT 295
+ D + Y L D A P + + ARI I +LR+ F A M DD+NT
Sbjct: 314 NGLDRITTAYTNLSHRLDTARAEEPNDQAQEQARI-------IGELRERFIAEMDDDINT 366
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
++ +T F D +K N L + Q + E +R + + E+ +LGL
Sbjct: 367 ANAITVIF-DVVKEANLYL--------RHQNVGETE-VRAYMDLLVELTEVLGL------ 410
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
D A + EL + ++ LIEER ARK ++F++SD+IR L KGI L D +
Sbjct: 411 --------DIA-EEQELLDSEIDALIEERTEARKARNFARSDEIRDLLAAKGIVLEDTPQ 461
Query: 416 ETIWR 420
WR
Sbjct: 462 GVRWR 466
>gi|308050311|ref|YP_003913877.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
gi|307632501|gb|ADN76803.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
Length = 460
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 238/421 (56%), Gaps = 37/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E+ +L R+ + D L L P +P V+ HM +I D+I ++N
Sbjct: 73 KIIRRAAENNESCEALVARFTEAMYQDFDALNLLRPDIEPTVTGHMAEIIDIIQTLVNKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV+F V+ +YG+LS Q LE ++G RV VD KRNP DFALWK+AK GEP
Sbjct: 133 HAYVTDAGDVWFEVKTFDDYGKLSRQDLEQLQSGARVEVDESKRNPMDFALWKSAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENE+AQSC A + V+
Sbjct: 193 SWTSPWGEGRPGWHIECSAMNGKHLGKVFDIHGGGSDLMFPHHENEVAQSCCAHDTNYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G V N EKMSKSL NFFTIR++ ++Y ++R+FL+S+HYRS LNYS L+ A
Sbjct: 253 YWVHSGMVQVNKEKMSKSLNNFFTIREVLKQYQAESVRYFLLSSHYRSQLNYSEENLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-DCINKLRDEFHARMSDDLNTSHIL 299
A+ +Y L+ + PA E + N F A M+DD NT+ L
Sbjct: 313 HAALERLYTALRG----------------VTPATELNLDNDHVARFQAAMNDDFNTAEAL 356
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F + LN+ K+ +Q L +R + ++GLL + +
Sbjct: 357 PVLFD-----LARELNITKEDGESEQAAQLAGLMRYLGG-------VMGLLEQAPEAFLQ 404
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
D + + E LI+ R AR +KD++ +D R +LT GI L D T W
Sbjct: 405 GGGDDDEVAKIE-------GLIKARNDARASKDWAAADAARDELTAMGIVLEDGAGGTSW 457
Query: 420 R 420
R
Sbjct: 458 R 458
>gi|416231107|ref|ZP_11628689.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
gi|326560050|gb|EGE10445.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 480
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 242/422 (57%), Gaps = 28/422 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA D GE L++R+ D L C P +PR ++H+E ++ +I ++ +
Sbjct: 82 KIIQRAYDNGETITELTDRFITAMHQDEQFLGCQSPNIEPRATEHIENMQHLIDVLLTKN 141
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY G DV++A+EK PNYG+LS + +++ +AG ERV+ KR+P DF LWK AK
Sbjct: 142 LAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASERVSTAEDKRHPFDFVLWKTAKPS 201
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A +
Sbjct: 202 EPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGHDLQFPHHENEIAQSEGATGKTY 261
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
++WMH G + + EKMSKSLGNFFTIR++ +++HP +R FL+S+HYRSP+N+S L
Sbjct: 262 ANHWMHMGFINIDGEKMSKSLGNFFTIREVMDKFHPETIRFFLLSSHYRSPVNFSDTALK 321
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ A+ IYQ+L+ E+ I P A + ++ F M+DD NT
Sbjct: 322 ESHTALSRIYQSLKSA--------ENFGVISIMPNAWE--SEAGQAFAKAMNDDFNTPKA 371
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F + IN ++ + Q Q+ S +++L + N + + E
Sbjct: 372 VSVLF-SVVTEINRAMKA-GEYQKATQEASTLKTLASVLN-----------IAQSSPHEF 418
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ + K L++ ++ I +R A+ K+F+K+D IR +L R+GI L D T
Sbjct: 419 LQ--ANIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELEDGRMGTT 476
Query: 419 WR 420
WR
Sbjct: 477 WR 478
>gi|311070741|ref|YP_003975664.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
gi|419823194|ref|ZP_14346754.1| cysteinyl-tRNA ligase [Bacillus atrophaeus C89]
gi|310871258|gb|ADP34733.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
gi|388472725|gb|EIM09488.1| cysteinyl-tRNA ligase [Bacillus atrophaeus C89]
Length = 466
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 233/424 (54%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR A++LGE+ ++S R+ + Y D+ L C PRV+++M+ I D + ++I
Sbjct: 74 KLIRAADELGEDVPTISERFIKAYFEDVGALGCKKADLHPRVTENMDAIIDFVQELIKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESDGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKDGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WD+PWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDAPWGKGRPGWHIECSAMVKKYLGEQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKKHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
+A + A S H + N A+D I + R F M DD NT+
Sbjct: 314 NA-------FNRLKTAYSNLL-HRLNSSTNLTADDDEWLKKIEEHRTAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F+ A K N L + + + IE +I + +LGL
Sbjct: 366 NAISILFELA-KHANYYLQ--EDNTADKVINAFIEMFDRIAS-------VLGL------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ EL ++DV +LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------TMGEQELLDQDVEELIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|225024891|ref|ZP_03714083.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
gi|224942349|gb|EEG23558.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
Length = 473
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 178/435 (40%), Positives = 235/435 (54%), Gaps = 54/435 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDVEPKATENIPQMIAMIEALIRNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSDKLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHVCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR + ++Y P +R F++ A
Sbjct: 253 EHAHTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYDPEIVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A +A+ +Y TL + V FQ + A D +
Sbjct: 313 HYRSPLNYSDAHLDDAKNALTRLYNTLAN--VPPVEFQ-------VASEANDYTRR---- 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F A M+DD +T + F+ L + K Q L L+ + +
Sbjct: 360 FFAAMNDDFDTVQAVAVLFE------------LAGEANKTQSAELSGCLKALAGTI---- 403
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 404 ---GLLQRNP-TEFLQ----GGATANGLSNEEIEALIARRKQARADKNWAESDRIRDLLA 455
Query: 405 RKGIALMDMGKETIW 419
+GI L D T W
Sbjct: 456 EQGITLRDGADGTSW 470
>gi|121635739|ref|YP_975984.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
gi|120867445|emb|CAM11217.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
Length = 699
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 299 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 358
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 359 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 418
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 419 AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 478
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ A
Sbjct: 479 DHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRA 538
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ T +P + +
Sbjct: 539 HYRSPLNYSDAHLDDAKGALTRLYTTLKN-------------TPPADPMPSEADDDYTRR 585
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+ M+DD +T + F+ L + K L L+ +
Sbjct: 586 FYVAMNDDFDTVKAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 627
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR L
Sbjct: 628 -IIGLLQRDP-TEFLQ----GGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLN 681
Query: 405 RKGIALMDMGKETIWR 420
I L D T WR
Sbjct: 682 EHKIILEDNAGGTTWR 697
>gi|419718461|ref|ZP_14245778.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
gi|383305296|gb|EIC96664.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
Length = 469
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 245/426 (57%), Gaps = 37/426 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +A + G + +S RY E DMA + LP T P + +E ++DMI ++I +
Sbjct: 72 KIINKAIEEGVDAAVISQRYINECKKDMAAMNVLPATKNPLATQEIEGMEDMIGKLIESG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKA 117
AYV +G V+F V+ +YG+LS + ++ ++G R V + K + DF LWK K
Sbjct: 132 HAYVAKDGTVYFRVKSFKDYGKLSHKNIDELQSGFREIKVTGEDGKEDSNDFVLWKPKKE 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP W+SPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENEIAQS +A S
Sbjct: 192 GEPYWESPWSKGRPGWHIECSVMSKKYLGEQIDIHGGGEDLIFPHHENEIAQSESASGKS 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
+YWMHN + +N+KMSKS GNFFT+R I+E+Y LR F++SAHYRSPLN+S +
Sbjct: 252 FANYWMHNAFLNIDNKKMSKSAGNFFTVRDISEKYDLQVLRFFMLSAHYRSPLNFSAELM 311
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPA--AEDCINK-LRDEFHARMSDDLN 294
++A +++ I + + + ++ TA I A A I K L+D+F M DD N
Sbjct: 312 EAAKNSLERILTGMDNIKTVIA----RNNTAPITDAELANLEIAKVLKDKFADAMDDDFN 367
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T+ ++ F+ +K N++L+ + S +E + + N ++ + +LG++
Sbjct: 368 TADAVSAIFE-LIKLSNTTLS----------ENSTVEYAKGLLNVIEPLCDVLGIITE-- 414
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
++ E+ + ++ LI R ARKNKDF+ +D+IR DL KGI L D
Sbjct: 415 -------------RKTEILDSEIEDLIARRTQARKNKDFALADKIRNDLLEKGIVLEDTR 461
Query: 415 KETIWR 420
+ W+
Sbjct: 462 EGVKWK 467
>gi|321313765|ref|YP_004206052.1| cysteinyl-tRNA synthetase [Bacillus subtilis BSn5]
gi|418034772|ref|ZP_12673241.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|320020039|gb|ADV95025.1| cysteinyl-tRNA synthetase [Bacillus subtilis BSn5]
gi|351468426|gb|EHA28646.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SC-8]
Length = 466
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 229/424 (54%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++S R+ + Y D++ L C PRV ++M+ I + + Q++
Sbjct: 74 KLIKAANELGEDVPTISERFIKAYFEDVSALGCRKADLHPRVMENMDAIIEFVDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
A + A S Q H + N +D + + R F M DD NT+
Sbjct: 314 SA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRKAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L K + IE +I + +LG
Sbjct: 366 NAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI-------VSVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|322374189|ref|ZP_08048722.1| cysteine--tRNA ligase [Streptococcus sp. C150]
gi|321276894|gb|EFX53966.1| cysteine--tRNA ligase [Streptococcus sp. C150]
Length = 447
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 227/421 (53%), Gaps = 52/421 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + LS+++ ++ D A L P T PRV ++M++I ++ +++
Sbjct: 73 KIIKAANEAGISTKELSDKFIAAFMEDTAQLGVKPATQNPRVINYMDEIIAFVSTLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLEN---NRAGERVAVDSRKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ +G A +RK NP DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVAKSKNYAKLANKTLEDLEIGASGRTDAETARKENPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SWDSPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EISWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + D EV L + + + D F M DD NT++
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTGQVDQAELQTYLDAFQEAMDDDFNTANG 358
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K+INS + +++ ++VL++ G++
Sbjct: 359 VTVLF-DMAKWINSG-----------------HYDQTVKDAFEKVLQVFGIVF------- 393
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ E+ +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D
Sbjct: 394 ----------KEEVLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKDGVR 443
Query: 419 W 419
W
Sbjct: 444 W 444
>gi|114563765|ref|YP_751278.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
gi|122299286|sp|Q07ZX5.1|SYC_SHEFN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114335058|gb|ABI72440.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
Length = 460
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 237/424 (55%), Gaps = 43/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ SL+ R E D L P ++PR + H+E+I DM+ ++++ D
Sbjct: 73 KIIKRAAENNESCESLTERLIAEMHQDFDALNMKRPDFEPRATLHIEEIIDMVQRLLDRD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V P YG+LSGQ L+ +AG RV +D+ KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVLFSVASFPEYGQLSGQNLDQLQAGARVEIDNAKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSL NFFTIR + + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDREKMSKSLDNFFTIRDVLKHYDAETVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ ++ + AE + K F + M DD NT +
Sbjct: 313 RAALERLYTALKGLDLTVDA-----------APAEAFVAK----FKSAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N LK + +L SL+++ + +LGL+
Sbjct: 358 VLFE-----MVREINRLKTTDMAEAS-ALGVSLKQLAD-------VLGLISQTP------ 398
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE- 416
+A + E ++++V + LI ER AR KD+ +D R L G+ L D G
Sbjct: 399 ----EAFFKGEGSDDEVAEIEALIVERNRARTEKDWPAADVARDRLNELGVELEDGGPSG 454
Query: 417 TIWR 420
T WR
Sbjct: 455 TTWR 458
>gi|428277509|ref|YP_005559244.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
gi|430755604|ref|YP_007211165.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Bacillus
subtilis subsp. subtilis str. BSP1]
gi|291482466|dbj|BAI83541.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
gi|430020124|gb|AGA20730.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Bacillus
subtilis subsp. subtilis str. BSP1]
Length = 466
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 228/424 (53%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+ I + + Q++
Sbjct: 74 KLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMDAIIEFVDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
A + A S Q H + N +D + + R F M DD NT+
Sbjct: 314 SA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRKAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L K + IE +I + +LG
Sbjct: 366 NAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI-------VSVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|86147083|ref|ZP_01065400.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
gi|85835148|gb|EAQ53289.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
Length = 461
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 239/422 (56%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++ + +I +++ ++I
Sbjct: 73 KIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEIIELVEKLIQRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V+K YG+LS Q LE +AG RV +DS KR+P DF LWK +K GEP
Sbjct: 133 FAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDIDSAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ +V +P E+ + + F M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDVTAAP-----------AGGEEYVTR----FSTAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ A +N +K + IE + ++E+ I+G+L P A+ +
Sbjct: 358 VLFEMA-----REINRIKTES--------IEKASALGALMRELADIIGILHQDPEAFLQ- 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
D A E+ E + LI+ R +R +KD++ +D R L GI L D + T
Sbjct: 404 ----GDAAGNDDEVAE--IEGLIKLRNDSRASKDWANADLARDKLNELGIVLEDGPEGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|386343692|ref|YP_006039856.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus thermophilus JIM 8232]
gi|387908885|ref|YP_006339191.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus thermophilus MN-ZLW-002]
gi|339277153|emb|CCC18901.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus thermophilus JIM 8232]
gi|387573820|gb|AFJ82526.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus thermophilus MN-ZLW-002]
Length = 447
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 230/421 (54%), Gaps = 52/421 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN++G + LS+++ ++ D A L P T PRV ++M++I ++ +I+
Sbjct: 73 KIIKAANEVGISTKELSDKFITAFMEDTAQLGIKPATQNPRVINYMDEIIAFVSILIDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK +P DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDAETDRKEDPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SW+SPWGPGRPGWHIECS M+ L DIHGGG+DL FPHH NEIAQS A +
Sbjct: 193 EISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGVDLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + D EV L + ++ + D F A M DD NT++
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQTYLDAFQAAMDDDFNTANG 358
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K+INS +++ +++L++ G+ V
Sbjct: 359 VTVLF-DMAKWINSG-----------------NYDETVKDAFEKILQVFGI--------V 392
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ E +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 393 FEE---------ETLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVR 443
Query: 419 W 419
W
Sbjct: 444 W 444
>gi|410727955|ref|ZP_11366148.1| cysteinyl-tRNA synthetase [Clostridium sp. Maddingley MBC34-26]
gi|410597515|gb|EKQ52126.1| cysteinyl-tRNA synthetase [Clostridium sp. Maddingley MBC34-26]
Length = 466
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 243/422 (57%), Gaps = 33/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I +AND G + L ++Y +EY D L+ T PR ++++ I + ++I
Sbjct: 72 KMINKANDEGVSVKELGDKYIKEYYQDADALRIERATINPRATEYITDIIKFVEELIAAG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+++ +K YG+L GQ LE+ +AG R++VD RK++P DFA+WKA K GEP+
Sbjct: 132 FAYEVDGDVYYSTKKFSGYGKLVGQNLEDLQAGARISVDERKKDPMDFAVWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG+DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGLGRPGWHIECSCMAKKLLGDTIDIHAGGMDLKFPHHENEIAQSEAVTGKPFAHY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V +N+KMSKSL NFFT R+I E Y ++R ++S HYR +N++ LDSA
Sbjct: 252 WIHSAFVNVDNKKMSKSLNNFFTAREILEEYDADSIRFLMLSGHYRIQINFTKELLDSAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINP---AAEDCINKLRDEFHARMSDDLNTSHI 298
++ + L +C L ++ K I+ ++K RD F +M DD NT+
Sbjct: 312 SSI----ERLYNCINNLENLKDEVKKKAIDEEELKYLKSLDKYRDRFIEKMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F D + IN++++ I S ++ ++ E++R LG P G +
Sbjct: 368 ISVLF-DLTRDINNNVD--------------INSSAELCDKANELIRELG-KPLG----I 407
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ K L E ++ +LIE+R ARKNKDF+ +D+IR DL + I L D +
Sbjct: 408 LQSHMKKDL------ETEIQELIEKRQQARKNKDFALADKIRDDLKSRNIILEDTPQGVR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|398309196|ref|ZP_10512670.1| cysteinyl-tRNA ligase [Bacillus mojavensis RO-H-1]
Length = 466
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 229/424 (54%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+ I D I Q++
Sbjct: 74 KLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMDAIIDFIDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
A + A S Q H + N +D I + R F M DD NT+
Sbjct: 314 SA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDKWVAKIEEHRTAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F A N++ + + + I+ +I + +LG
Sbjct: 366 NAISVLFDLAK---NANYYLQEDHTADHVITAFIDMFDRI-------VSVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|329117979|ref|ZP_08246692.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465867|gb|EGF12139.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
Length = 494
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ D L L P +P+ ++++ Q+ MI +I
Sbjct: 94 KIIARAAENGETIGELTARFIAAMHEDADALGVLRPDLEPKATENIPQMIAMIESLIQKG 153
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + P YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 154 KAYPAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 213
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 214 AWESPWGQGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 273
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR + ++Y P +R F++ A
Sbjct: 274 DHTLTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYDPEVVRFFILRA 333
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y L++ A A + N
Sbjct: 334 HYRSPLNYSDAHLDDAKGALARLYTALKNTPPA-------------GFALSETANNYTRR 380
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K + +L L+ +
Sbjct: 381 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTRDAALSGCLKALGG------ 422
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL +E LQ L+ E++ LI R AR +K++++SD+IR LT
Sbjct: 423 -IIGLLQRDP-TEFLQ----GGTASDGLSNEEIENLIAMRKQARADKNWAESDRIRDLLT 476
Query: 405 RKGIALMDMGKETIWR 420
+ I L D T WR
Sbjct: 477 AQNIILEDSAGITTWR 492
>gi|423680487|ref|ZP_17655326.1| cysteinyl-tRNA synthetase [Bacillus licheniformis WX-02]
gi|383441593|gb|EID49302.1| cysteinyl-tRNA synthetase [Bacillus licheniformis WX-02]
Length = 467
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 231/423 (54%), Gaps = 37/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+ GE ++ R+ + Y D+ L C PRV+++M++I D I +I+
Sbjct: 74 KLIKAANEHGEEVPVIAERFIKAYFEDVGSLGCTKADCHPRVTENMDEIIDFIQTLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV++ YG+LS Q ++ R+G R+ V +K + DF LWKAAK E S
Sbjct: 134 YAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVGEKKEDALDFTLWKAAKDNEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAFPHHENEIAQSEALTGKPFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I + + P LR F++S HYR P+NYSV L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKEHDPQVLRFFMLSVHYRHPINYSVELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDCINKL---RDEFHARMSDDLNTSH 297
+A + A S Q K++ + + + K+ R F M DD NT++
Sbjct: 314 NA-------FGRLKTAYSNLQHRLKSSTNLTEGDSEWLEKIEEQRKAFQTAMDDDFNTAN 366
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
++ F D K N L Q K +I++ ++ +E+ VL
Sbjct: 367 AISVLF-DLAKHANYYL------QEKNTAEHVIQAFIQLFDEICSVLGF----------- 408
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+LK EL ++D+ +LIE+R AR+N+DF+ SDQIR L I L D + T
Sbjct: 409 --------SLKEQELLDKDIEELIEKRNEARRNRDFATSDQIRDQLKSMNIILEDTPQGT 460
Query: 418 IWR 420
W+
Sbjct: 461 RWK 463
>gi|387771057|ref|ZP_10127229.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386902976|gb|EIJ67797.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 459
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 228/420 (54%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L R E D L L P +PR + HM +I M+ +I
Sbjct: 73 KIIKRALENNETCDQLVERMIAEMHKDFDALNILRPDVEPRATKHMPEIIAMVEALIKRG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE NYGRLS Q LE +AG RV + S K+NP DF LWK +K EP
Sbjct: 133 HAYVAADGDVMFDVESYQNYGRLSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKPNEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWESPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFPHHENEIAQSCCAHDGEYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T N EKMSKSL NFFTIR I +Y ++R+F ++A YRS L+YS + A
Sbjct: 253 YWLHTGMLTINEEKMSKSLNNFFTIRDILTKYDSESVRYFFLTAQYRSLLDYSEENIGLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ C+ + P ++ + + F M DD NT L
Sbjct: 313 RKALERLYTALRGCDFNVKM-----------PESDQYV----EAFKEAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK + I ++ + +K++ +LGLL S +
Sbjct: 358 VLFDLA-----REINKLKTEN--------INEANRLSSRLKQLAGVLGLLEQDPESFLQG 404
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D + + E QLI++R AR KD++++D R +LT GI L D T WR
Sbjct: 405 DTADDEVAKIE-------QLIKQRNEARAAKDWAQADAARNELTAMGIVLEDGANGTTWR 457
>gi|218895225|ref|YP_002443636.1| cysteinyl-tRNA synthetase [Bacillus cereus G9842]
gi|226735046|sp|B7ISZ9.1|SYC_BACC2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218541053|gb|ACK93447.1| cysteinyl-tRNA synthetase [Bacillus cereus G9842]
Length = 465
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 247/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + I K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLVE------IEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A + N L L++ K +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA-NYANQYL--LEEHTSK----VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELTQEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKGRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|110834996|ref|YP_693855.1| cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
gi|123050340|sp|Q0VML5.1|SYC_ALCBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110648107|emb|CAL17583.1| Cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
Length = 460
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 232/419 (55%), Gaps = 35/419 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A D GE +L+ R+ Q + DMA L P+ P+ +DH+ ++ MI ++
Sbjct: 74 KIIKAAADNGEAISTLTERFTQAFADDMASLNAKTPSIIPKATDHIPEMIQMIAILVEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +G V FAVE P+YG+LSG++LE+ AG RV V KR+P DF LWK + +P
Sbjct: 134 HAYEADGQVLFAVESMPDYGKLSGRKLEDMLAGARVEVADYKRHPGDFILWKPSTDEQPG 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM +L DIHGGG DLIFPHHENEIAQ C A V Y
Sbjct: 194 WDSPWGRGRPGWHIECSAMIHKHLGDVIDIHGGGQDLIFPHHENEIAQGCCAHGTDYVRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ + EKMSKSLGNF +R + +YH LR L+S+HYRSPLN+S LD+A
Sbjct: 254 WLHNGYINIDGEKMSKSLGNFRLVRDLLTQYHGETLRFALLSSHYRSPLNFSADVLDNAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ +Y L ++P E G N D + DDLNTS ++
Sbjct: 314 KGLDTLYYALLGRGETVAP--EAGYQLPDNHPVLDA-----------LKDDLNTSEAVS- 359
Query: 302 AFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
AL I LN + +PK + L + V+ P A+
Sbjct: 360 ----ALHAIAGELNKAELDDKPKLKAELLAAADLLGLLTVE----------PTAW----- 400
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
++K + L+ + + L+EER A+K+K+F+++D+IR LT+ GI L D + T W
Sbjct: 401 -FQNKNVSEDGLSNDAIDALVEERTQAKKDKNFARADEIRQQLTKAGIQLEDTREGTRW 458
>gi|429744209|ref|ZP_19277714.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
gi|429163425|gb|EKY05652.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
Length = 473
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 234/436 (53%), Gaps = 54/436 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ D L L P +P+ ++++ ++ MI +I D
Sbjct: 73 KIIARAAENGETIGDLTARFIAAMHEDADALGVLRPDLEPKATENIAEMIAMIENLIARD 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGNGRPGWHIECSAMSEKLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHACGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR + ++Y P +R F++ A
Sbjct: 253 DHAVTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLKQYDPEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y L+ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTALKHTPPAEFALSENA-------------NDYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K Q L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTQSAELAGCLKALGG------ 401
Query: 345 RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLT 404
I+GLL + + L+ A+ L+ E+V LI +R AR +K++++SD+IR LT
Sbjct: 402 -IIGLLQ----RDPTEFLQGGAVADG-LSNEEVEALIAQRKQARADKNWAESDRIRDLLT 455
Query: 405 RKGIALMDMGKETIWR 420
+ I L D T WR
Sbjct: 456 AQNIILEDGAGGTSWR 471
>gi|171463666|ref|YP_001797779.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229470557|sp|B1XUY8.1|SYC_POLNS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171193204|gb|ACB44165.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 473
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/438 (40%), Positives = 236/438 (53%), Gaps = 58/438 (13%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE +L+NR+ D +L + P +PR +D++ Q++ MI ++I N+
Sbjct: 73 KIINRAIENGEPISALTNRFVDAMHADSDELGLMHPDQEPRATDYIAQMQGMIGKLIENE 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV FAV P YG+LSG+ L+ AGERVAV KR+P DF LWK+AK EP
Sbjct: 133 LAYQANDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAVGDGKRDPLDFVLWKSAKPEEP 192
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 ADTRWKSPWGEGRPGWHIECSAMSCDLLGEHFDIHGGGADLQFPHHENEIAQSEGALYGK 252
Query: 178 N--------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 229
+ V+YWMHNGH+ N EKMSKSLGNFF IR + + + P +R F++ HYRSP
Sbjct: 253 DRKVDDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDPEVIRFFMLKTHYRSP 312
Query: 230 LNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARM 289
+NYS QL+ A + +Y L A + NP A+ F M
Sbjct: 313 INYSDAQLEEARSGLVRLYTALAQGSKAQTI-----SLGSSNPWAK--------RFADAM 359
Query: 290 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL-RILG 348
+DD NT + F ++ + + + E K+VL IL
Sbjct: 360 NDDFNTPEAIAVLF------------------------DIVSEVNRAQGEEKQVLANILK 395
Query: 349 LLPPGAYSEVLQQ-----LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 403
L GA LQ+ L+ A +A L+ E + + I R AA++ KDF+K+D IR L
Sbjct: 396 AL--GASLNFLQRDPTVFLQSSAKDQAGLSPEQIEEQIAARVAAKQAKDFAKADAIRKAL 453
Query: 404 TRKGIALMDM-GKETIWR 420
+GI L D G T WR
Sbjct: 454 LEQGIVLEDKPGGLTGWR 471
>gi|422017177|ref|ZP_16363745.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
gi|414105882|gb|EKT67436.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
Length = 462
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 235/420 (55%), Gaps = 33/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ L+ R E D L L P +PR + H+ +I ++ +I
Sbjct: 73 KIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEIIELTESLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V+ PNYG LS Q L+ +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS LNY+ L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQLNYTEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + +P A I K R F M+DD NT +
Sbjct: 313 RTALERLYTALRGTDKSATP-------------AGGEIYKSR--FCEAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A LN LK + +++ + +++E+ ++LGLL E
Sbjct: 358 ALFDMA-----RELNRLKTEN--------MDAANGMAAQLRELAKVLGLLEQD--PETFL 402
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q ++ AE+ + + LI++R AR++KD++ +DQ R LT GI L D T WR
Sbjct: 403 QGGAQSEDDAEVAK--IEALIKQRNDARQSKDWALADQARDALTAMGIVLEDSSAGTTWR 460
>gi|225026000|ref|ZP_03715192.1| hypothetical protein EUBHAL_00238 [Eubacterium hallii DSM 3353]
gi|224956650|gb|EEG37859.1| cysteine--tRNA ligase [Eubacterium hallii DSM 3353]
Length = 464
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 231/419 (55%), Gaps = 28/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G +S R+ E DM L P T+ P+ ++ ++ + MI+ +I
Sbjct: 72 KIIKKANEEGVPASEISERFIAECKKDMEGLNIEPATHNPKATEEIDGMIAMISTLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY G V+F K NYG+LS + L++ RAG R+AV K + DF LWK K GEP+
Sbjct: 132 YAYEKNGTVYFRTRKFKNYGQLSKKNLDDMRAGIRIAVSDEKEDAMDFVLWKPKKEGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS MS Y+ DIH GG DL+FPHHENEIAQS A + +Y
Sbjct: 192 WVSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLVFPHHENEIAQSEACNDEKFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHN + +N+KMSKS GNFFT+R+I+E+Y +R F++SAHYRSPLN+S ++++
Sbjct: 252 WMHNAFLNIDNKKMSKSAGNFFTVREISEKYPLQVIRFFMLSAHYRSPLNFSDTLVEASK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + I + ++ E E+ N L+ ++ A M DD NT+ +
Sbjct: 312 NGLERILTAIDHLREVIAAAPEGELNVEDQKNLEEA-NALKAKYEAAMEDDFNTADAIAA 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ +K N + K QQ L +I L ILG++
Sbjct: 371 IFE-LVKLANVTAES-GSKAYAQQLLDIIVQL----------CDILGIITE--------- 409
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
K+ EL ++D+ LIEER AARK K+F+++D+IR L KGI L D W+
Sbjct: 410 ------KKEELLDDDIEALIEERQAARKAKNFARADEIRDLLADKGIILEDTRAGVKWK 462
>gi|167758881|ref|ZP_02431008.1| hypothetical protein CLOSCI_01226 [Clostridium scindens ATCC 35704]
gi|167663621|gb|EDS07751.1| cysteine--tRNA ligase [Clostridium scindens ATCC 35704]
Length = 468
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 230/424 (54%), Gaps = 30/424 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G + +S RY E DM + P T P ++ + + DMI +I+
Sbjct: 72 KIIKRAIEEGVSSDEISKRYIAECKKDMDGMNIKPATKNPMATEEICGMVDMIQTLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY G V++ K YG+LS + L++ R+GER V + K +P DF LWK K G
Sbjct: 132 YAYEKNGTVYYRTRKFEEYGKLSHKNLDDLRSGERSLLVTGEDEKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W+SPW GRPGWHIECS MS YL + DIH GG DL+FPHHENEIAQS AA
Sbjct: 192 EPAWESPWSDGRPGWHIECSEMSKKYLGEQIDIHAGGEDLVFPHHENEIAQSEAANGKEF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YWMHN + +N KMSKSLGNF T+R+I+++Y LR F++SAHYRSPLN+S ++
Sbjct: 252 AKYWMHNAFLNIDNRKMSKSLGNFRTVREISQQYDLQILRFFMLSAHYRSPLNFSADLME 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
++ + I + + L + T A ++ EF M DD NT+
Sbjct: 312 ASKSGLERIVNAADNLKFLLGNAKSESMTQEEEAAFAKTAEYVQ-EFERAMDDDFNTADA 370
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D +K+IN++ + K K+ Q L+ L +LGL+
Sbjct: 371 IASVF-DLVKYINTTADADKSKEFLQNLFDLLVKLTD----------VLGLIVD------ 413
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K+ E+ ED+ ++IEER AARK KDF+++D IR +L KGI L D +
Sbjct: 414 ---------KKEEMLAEDIEKMIEERQAARKAKDFARADAIRDELLAKGIVLEDTREGVK 464
Query: 419 WRPC 422
W+
Sbjct: 465 WKKA 468
>gi|438003406|ref|YP_007273149.1| Cysteinyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|432180200|emb|CCP27173.1| Cysteinyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 419
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 237/422 (56%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAND G L R+ EY D L PR ++H+++I D+I ++
Sbjct: 25 KMIKRANDEGITVKELGERFIGEYFHDADTLGITRADVHPRATEHIDEIIDLIKILVEKG 84
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV++ + +YG+LS Q ++ +AG R+ +K++P DFALWKA K GEP+
Sbjct: 85 YAYEVNGDVYYKTSRFKDYGKLSHQNIDELKAGARIEPGEQKKDPIDFALWKAQKPGEPA 144
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS M+ YL DIHGGG DLIFPHHENEIAQS AA +
Sbjct: 145 WDSPWGKGRPGWHIECSVMAMKYLGETIDIHGGGPDLIFPHHENEIAQSEAATGKPFARF 204
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
+MH G++ NN+KMSKSLGNFFT+R I + Y P LR F++S+HYR+P+N+S ++ A
Sbjct: 205 FMHVGYLNINNQKMSKSLGNFFTVRDILKTYDPEVLRFFMLSSHYRNPINFSQDLMEQAK 264
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
+++ + L + ++ + + + E +NKL ++EF M DD NT+
Sbjct: 265 NSL----ERLHNAIYSMEHLESVAQDKDLAEDDEKYLNKLETNKNEFIKAMDDDFNTADA 320
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F I NM + S +K+ + K+ + LG + G + +
Sbjct: 321 IASLFN-----IVREYNMFVDEN----------SPKKLIVDTKDAILTLGSV-LGLFRKF 364
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+++ L +E++ Q I ER ARK K+++ +D+IR DL +GI L D
Sbjct: 365 MEKT---------LLDEEIEQKIIEREQARKEKNYALADKIRDDLKAQGIILEDTPAGVR 415
Query: 419 WR 420
W+
Sbjct: 416 WK 417
>gi|228919040|ref|ZP_04082419.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228956531|ref|ZP_04118327.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229040995|ref|ZP_04189758.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH676]
gi|229107776|ref|ZP_04237412.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|229125607|ref|ZP_04254639.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|229142896|ref|ZP_04271337.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|229148499|ref|ZP_04276755.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1550]
gi|296500924|ref|YP_003662624.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis BMB171]
gi|228634915|gb|EEK91488.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1550]
gi|228640517|gb|EEK96906.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|228657799|gb|EEL13605.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|228675625|gb|EEL30833.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|228727292|gb|EEL78486.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH676]
gi|228803096|gb|EEM49918.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228840565|gb|EEM85827.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296321976|gb|ADH04904.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis BMB171]
Length = 420
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N I K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEIEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELSKEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|172056119|ref|YP_001812579.1| cysteinyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
gi|229558633|sp|B1YGS9.1|SYC_EXIS2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171988640|gb|ACB59562.1| cysteinyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
Length = 465
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 227/422 (53%), Gaps = 34/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR AN+LGE+ +L+ R+ + Y D L P V++ M+ I I ++
Sbjct: 73 KIIRTANELGEDYHALTKRFIEAYHADTGALNVQKADIHPLVTETMDDIIAFIEVLVKKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F +YG+LS Q ++ R+G R+ V +K +P DF LWKAAK GEP+
Sbjct: 133 NAYASSGDVYFRTRSFKDYGQLSQQSIDELRSGARIEVGEKKEDPLDFVLWKAAKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A +Y
Sbjct: 193 WTSPWGEGRPGWHIECSAMAKKYLGDTIDIHAGGQDLKFPHHENEIAQSEACNSQKFANY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + NEKMSKSLGNF T+ + + P+ LR F++S YR P+NYS +D A+
Sbjct: 253 WMHNGFLNIENEKMSKSLGNFLTVHEAIQAVDPMVLRFFMLSVQYRHPINYSRDLIDQAA 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHARMSDDLNTSHI 298
+ + I +++ + E L+ TA + A E +N+ ++ F M DD NT++
Sbjct: 313 NGLARIRESVANVEHRLT------MTADLGTATEKWLNRIEEIKQHFVTSMDDDFNTANA 366
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K N L Q ++E + E+ VL + + G
Sbjct: 367 VTDLF-DLSKEANLYLG------EDQVAKEVLERFLAVFQELSTVLGVTLTIEKG----- 414
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L +E+V QLI +R ARK +DF+++D IR L +GI L D +
Sbjct: 415 -------------LLDEEVEQLIRDRDTARKERDFARADAIRDQLRDQGILLEDTAQGMR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|417839754|ref|ZP_12485924.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
gi|341951855|gb|EGT78407.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
Length = 459
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 234/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTVQSAVAF-----------GGENFVATFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + +E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD+S +D R +LT GI L D T
Sbjct: 396 QEPEKFLQSGSDDDEVAKIEALIKQRNDARAAKDWSAADAARNELTAMGIVLEDGPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|336421767|ref|ZP_08601922.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_57FAA]
gi|336009616|gb|EGN39607.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_57FAA]
Length = 468
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 230/424 (54%), Gaps = 30/424 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G + +S RY E DM + P T P ++ + + DMI +I+
Sbjct: 72 KIIKRAIEEGVSSDEISKRYIAECKKDMDGMNIKPATKNPLATEEICGMVDMIQTLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY G V++ K YG+LS + L++ R+GER V + K +P DF LWK K G
Sbjct: 132 YAYEKNGTVYYRTRKFEEYGKLSHKNLDDLRSGERSLLVTGEDEKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W+SPW GRPGWHIECS MS YL + DIH GG DL+FPHHENEIAQS AA
Sbjct: 192 EPAWESPWSDGRPGWHIECSEMSKKYLGEQIDIHAGGEDLVFPHHENEIAQSEAANGKEF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YWMHN + +N KMSKSLGNF T+R+I+++Y LR F++SAHYRSPLN+S ++
Sbjct: 252 AKYWMHNAFLNIDNRKMSKSLGNFRTVREISQQYDLQILRFFMLSAHYRSPLNFSADLME 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
++ + I + + L + T A ++ EF M DD NT+
Sbjct: 312 ASKSGLERIVNAADNLKFLLGNAKSESMTQEEEAAFAKTAEYVQ-EFERAMDDDFNTADA 370
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D +K+IN++ + K K+ Q L+ L +LGL+
Sbjct: 371 IASVF-DLVKYINTTADADKSKEFLQNLFDLLVKLTD----------VLGLIVD------ 413
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K+ E+ ED+ ++IEER AARK KDF+++D IR +L KGI L D +
Sbjct: 414 ---------KKEEMLAEDIEKMIEERQAARKAKDFARADAIRDELLAKGIVLEDTREGVK 464
Query: 419 WRPC 422
W+
Sbjct: 465 WKKA 468
>gi|333373148|ref|ZP_08465064.1| cysteine--tRNA ligase [Desmospora sp. 8437]
gi|332970727|gb|EGK09707.1| cysteine--tRNA ligase [Desmospora sp. 8437]
Length = 462
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/407 (39%), Positives = 229/407 (56%), Gaps = 34/407 (8%)
Query: 17 LSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEK 76
L+ RY + Y DM L P+ ++H+ ++++ I +I+ AY EGDV++ +
Sbjct: 85 LAERYIRAYFDDMDALGVQRADVHPKATEHIPEMQEAILTLIDKGYAYEREGDVYYRALR 144
Query: 77 SPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIE 136
+YG+LSGQ +E AG RV V+ +K P DFALWK AK GE SW+SPWG GRPGWHIE
Sbjct: 145 KEDYGKLSGQSVEELNAGARVEVNEKKETPLDFALWKKAKPGEISWESPWGRGRPGWHIE 204
Query: 137 CSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMS 196
CSAMS YL D+H GG+DL FPHHENEIAQS A + V YW+HNG++ NEKMS
Sbjct: 205 CSAMSRKYLGDTLDVHAGGMDLCFPHHENEIAQSEAWTEKPFVRYWLHNGYINMGNEKMS 264
Query: 197 KSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEV 256
KSLGN + ++ E+Y P ALR+FL+SAHYR+P+++S +A+ I +L+ +
Sbjct: 265 KSLGNVVRVHELREQYAPRALRYFLLSAHYRNPISFS-------HEAIRQIEGSLERFDT 317
Query: 257 ALSPFQEHGKTAR---INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSS 313
A++ A+ P + + L EF A M DDLNT++ ++ +A+KF N +
Sbjct: 318 AVTNLHHRMGAAQEGEAEPEVRERLASLTGEFEAAMDDDLNTANGIS-VLHEAVKFANET 376
Query: 314 LNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELT 373
+ + PK L++ + + E ILGL+ G + +++
Sbjct: 377 V--ARSVVPKGSLAMLLDWIHRFGGE------ILGLVTAGEEDSLAGEIE---------- 418
Query: 374 EEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
LIEER AR +DF ++D IR L +GI L D + WR
Sbjct: 419 -----ALIEERQQARAARDFKRADAIRDRLAAQGIILEDTPQGVRWR 460
>gi|261493400|ref|ZP_05989926.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496665|ref|ZP_05993045.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261307868|gb|EEY09191.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311044|gb|EEY12221.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 469
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/424 (41%), Positives = 235/424 (55%), Gaps = 44/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D L L P +PR + H+ +I M+ ++I+N
Sbjct: 83 KIIKRALENNETCDELVDRMIAEMHKDFDALNILRPDVEPRATKHIPEIIAMVEKLIHNG 142
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +KAGEP
Sbjct: 143 HAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSIKKNPMDFVLWKMSKAGEP 202
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 203 SWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 262
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS L+YS+ LD A
Sbjct: 263 YWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSLLDYSIDNLDLA 322
Query: 241 SDAVFYIYQTLQDCEVALSPF-QEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A+ +Y L+ C+V+ EH A F M DD NT L
Sbjct: 323 RSALERLYTALRGCDVSGEAIGGEHYVEA----------------FKTAMDDDFNTPGAL 366
Query: 300 TGAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
F+ I LN LK + K L++ +KE+ +LGL
Sbjct: 367 AVLFE-----IARELNKLKTEDMAKANGLAV---------RLKELAGVLGL--------- 403
Query: 359 LQQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
L+Q D LK +E ++ LI++R A+ K+++ +D++R L I L D
Sbjct: 404 LEQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTPNG 463
Query: 417 TIWR 420
TIWR
Sbjct: 464 TIWR 467
>gi|204930486|ref|ZP_03221416.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|452121220|ref|YP_007471468.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|204320420|gb|EDZ05623.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|451910224|gb|AGF82030.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 461
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 229/422 (54%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ ++L +R E D L L P +PR + H+++I ++ +I
Sbjct: 73 KIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEIIELTRTLIEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V P YG+LS Q LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGEYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ + + +P AR A M+DD NT +
Sbjct: 313 RASLERLYTALRGTDKSAAPAGGEAFEARFVEA---------------MNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F A +N LK + ++ LRKI +LGLL P + +
Sbjct: 358 VLFDMA-----REVNRLKGEDMTAAN-AMASHLRKISG-------VLGLLEQEPDVFLQS 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + E LI++R ARK KD++ +D R LT GI L D + T
Sbjct: 405 GAQADDGEVAEIE-------ALIQQRLDARKAKDWTAADAARDRLTEMGIILEDGPQGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|384173755|ref|YP_005555140.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349592979|gb|AEP89166.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 466
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 228/424 (53%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+ I + + Q++
Sbjct: 74 KLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMDAIIEFVDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
A + A S Q H + N +D + + R F M DD NT+
Sbjct: 314 SA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRKAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L K + IE +I + +LG
Sbjct: 366 NAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI-------VSVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMKIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|116627043|ref|YP_819662.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|386085793|ref|YP_006001667.1| Cysteinyl-tRNA synthetase, putative [Streptococcus thermophilus
ND03]
gi|116100320|gb|ABJ65466.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|312277506|gb|ADQ62163.1| Cysteinyl-tRNA synthetase, putative [Streptococcus thermophilus
ND03]
Length = 447
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 229/421 (54%), Gaps = 52/421 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN++G + LS+++ ++ D A L P T PRV ++M++I ++ +I+
Sbjct: 73 KIIKAANEVGISTKELSDKFITAFMEDTAQLGIKPATQNPRVINYMDEIIAFVSILIDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK +P DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDAETDRKEDPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SW+SPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + D EV L + ++ + D F A M DD NT++
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQAYLDAFQAAMDDDFNTANG 358
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K+INS ++N +++L++ G+ V
Sbjct: 359 VTVLF-DMAKWINSG-----------------NYDETVKNAFEKILQVFGI--------V 392
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ E +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 393 FEE---------ETLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVR 443
Query: 419 W 419
W
Sbjct: 444 W 444
>gi|295702329|ref|YP_003595404.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
gi|294799988|gb|ADF37054.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
Length = 465
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 242/421 (57%), Gaps = 33/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ A +LGE+ +++NR+ Y D + L C PRV+++M+ I + I +++ +
Sbjct: 74 KLIKAAKELGEDVPTIANRFIDAYFEDTSALGCKHADVHPRVTENMDIIIEFIDELVKKE 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV++ K YG+LS Q ++ ++G R+ V +K +P DF LWKA K GE +
Sbjct: 134 YAYESEGDVYYRTRKFEGYGKLSHQSIDELQSGARIEVGEKKEDPLDFTLWKATKDGEIA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A S Y
Sbjct: 194 WDSPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKSFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NY+ L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKKHDPSLLRFFILSVHYRHPINYNEEILENTR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSHIL 299
++ LQ L+ E T A+E + + +LR+ F M DD NT++ +
Sbjct: 314 KG----FERLQTAYGNLTHRLE-AATNLQEDASEWFEKLKELRETFVEEMDDDFNTANAI 368
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F+ A + ++L +L++ +IE+ K E KE+ +G+
Sbjct: 369 SVLFELAKQ---ANLYLLEQTTST----DVIEAFIK---EFKELGTAIGI---------- 408
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
AEL +E++ QLI++R ARK+++F +DQIR +L K I L D + T W
Sbjct: 409 ------TFGEAELLDEEIDQLIQDRIQARKDRNFQLADQIRDELKAKNIILEDTAQGTRW 462
Query: 420 R 420
+
Sbjct: 463 K 463
>gi|206972194|ref|ZP_03233141.1| cysteinyl-tRNA synthetase [Bacillus cereus AH1134]
gi|206732768|gb|EDZ49943.1| cysteinyl-tRNA synthetase [Bacillus cereus AH1134]
Length = 465
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N I K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLSEIEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELSKEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|384136752|ref|YP_005519466.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290837|gb|AEJ44947.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 487
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 232/423 (54%), Gaps = 31/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA +LG +P L+ + Y D L P T PRV++ +++I I +I+
Sbjct: 87 RIIQRAQELGVSPRELAEENIRYYFEDAGKLFIRPATVHPRVTECVDEIIRFIQDLIDRG 146
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY G V+F P YG+LS Q E+ RAG R+ V K +P DFALWKAAK GE
Sbjct: 147 HAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGYRIEVQDEKDDPTDFALWKAAKPGEEW 206
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWGPGRPGWHIECS M+ YL + DIH GG DLIFPHHENEIAQS A + Y
Sbjct: 207 WPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGGRDLIFPHHENEIAQSEAHSGKTFARY 266
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + N EKMSKS GNF R + ER P A+R FL+SAHYR+PLNY+ LD A
Sbjct: 267 WLHNGTLNINGEKMSKSTGNFIMARDLLERRDPRAVRFFLLSAHYRNPLNYTEEALDQAE 326
Query: 242 DAVFYIYQTLQDCE---VALSPFQEHGKTARINPAAEDC--INKLRDEFHARMSDDLNTS 296
A+ I + ++D + AL Q A P+A+ + ++R F M DD NT+
Sbjct: 327 QALSRIDRLIRDLDHRAEALKAMQGALDRADEVPSAQAHADVEQIRRAFIEAMDDDFNTA 386
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ F D ++ +N+ L K + LR + E+L +LG+
Sbjct: 387 DGMAAIF-DGVRLVNTRLEEGGVK---------LGDLRLYRDLFVELLGVLGI------- 429
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
K E E+++ +LI ERA ARK +DF+++D+IR L +GI L D
Sbjct: 430 ---------PKKEEERLEDEIERLIAERAEARKRRDFARADEIRDHLRHRGIVLEDTPYG 480
Query: 417 TIW 419
T W
Sbjct: 481 TRW 483
>gi|145589043|ref|YP_001155640.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|187629841|sp|A4SX62.1|SYC_POLSQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145047449|gb|ABP34076.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 473
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/433 (40%), Positives = 239/433 (55%), Gaps = 48/433 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E +L+NR+ D +L + P +PR +D+++Q++ MI ++I N+
Sbjct: 73 KIIKRALENSEPISALTNRFIAAMHADSDELGLMHPDQEPRATDYIQQMQGMIGKLIENE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY E GDV FAV P YG+LSG+ L+ AGERVA+ KR+P DF LWK+AK EP
Sbjct: 133 LAYQGEDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAIGGGKRDPLDFVLWKSAKPEEP 192
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ W+SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 ADTRWNSPWGEGRPGWHIECSAMSCDLLGAHFDIHGGGADLQFPHHENEIAQSEGALYGQ 252
Query: 178 N--------VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSP 229
N V+YWMHNGH+ N EKMSKSLGNFF IR + + + P +R F++ AHYRSP
Sbjct: 253 NRQENDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDPEVVRFFMLKAHYRSP 312
Query: 230 LNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 288
+NYS QL+ A + +Y L EV P D N F
Sbjct: 313 INYSDAQLEEARSGLTRLYTALTHIPEVDTVPI--------------DLQNPWAKRFADA 358
Query: 289 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 348
M+DD NT + F + S +N + + KQ L++SL N ++
Sbjct: 359 MNDDFNTPEAIAVLFD-----LASEVNRAQGAE-KQMLAGLLKSLGGTLNFLQR------ 406
Query: 349 LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 408
P + L+ + ++ L+ E + + I R AA++ KDF+K+D IR L +G+
Sbjct: 407 --DPTNF------LQAGSKDQSGLSSEQIEEHIAARVAAKQAKDFAKADGIRKALLEQGV 458
Query: 409 ALMDM-GKETIWR 420
L D G T WR
Sbjct: 459 VLEDKPGGITEWR 471
>gi|387894410|ref|YP_006324707.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens A506]
gi|387159469|gb|AFJ54668.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens A506]
Length = 460
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 229/420 (54%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ R D A L L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWK K GEP
Sbjct: 133 YAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDFVLWKGTKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSAINYSEDNLKDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A++P AR F M+DD T
Sbjct: 313 KGALERFYHALKGLP-AVAPAGGEAFVAR---------------FTEVMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ I++ + +KE+ +LG+L E
Sbjct: 357 VLFE-----MVREINRLRETD--------IDAAAGLAARLKELASVLGVLQ----MEADD 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ A R + E D LI+ R AAR NKD+++SD+IR LT G+ L D T WR
Sbjct: 400 FLQAGAEGRVDAAEVDA--LIQARLAARSNKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|372270883|ref|ZP_09506931.1| cysteinyl-tRNA synthetase [Marinobacterium stanieri S30]
Length = 463
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/424 (42%), Positives = 232/424 (54%), Gaps = 42/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E L+ R D L L P +PR + HM I DM+ ++
Sbjct: 73 KIIRRAAENDEQVDQLTERMIAAMHEDEERLFVLRPDQEPRATAHMGDIIDMVQSLVEKG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ VE+ NYGRL+ + +E+ R+G RV V+ K +P DF LWKAAK GE
Sbjct: 133 YAYPASNGDVYYRVERFANYGRLTNKVIEDLRSGARVEVEEAKESPLDFVLWKAAKPGEV 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA + V
Sbjct: 193 SWDSPWGKGRPGWHIECSAMSKCCLGETFDIHGGGPDLPFPHHENEIAQSEAANGCTYVH 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V EKMSKSLGNFFTIR + E Y +R+FL S HYRS ++YS L A
Sbjct: 253 YWMHAGPVRMGTEKMSKSLGNFFTIRDVLEHYDAEVVRYFLSSVHYRSYIDYSEDGLKEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ YQ LQ ++ A ++ + F A M DD NT L
Sbjct: 313 RSALERFYQALQ-------------AAGDLSTAEGGVGSEYEERFFAAMDDDFNTPRALA 359
Query: 301 GAFQDALKFINSSLNMLKKKQ-PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ + S LN ++Q P + L+L E+K + ++GL L
Sbjct: 360 VLFE-----LASELNKAVREQLPIAKPLAL---------ELKRLAGMIGL---------L 396
Query: 360 QQLKDKALK----RAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
QQ D LK EL E + LI++R ARK+++F+++D+IR +L +GI L D +
Sbjct: 397 QQDPDAFLKGEAAEGELDAEAIDSLIDKRNQARKDRNFAEADRIRDELLEQGIVLKDSRE 456
Query: 416 ETIW 419
T W
Sbjct: 457 GTNW 460
>gi|332800102|ref|YP_004461601.1| cysteinyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332697837|gb|AEE92294.1| cysteinyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 466
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 237/422 (56%), Gaps = 32/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAND G L R+ EY D L PR ++H+++I D+I ++
Sbjct: 72 KMIKRANDEGITVKELGERFIGEYFHDADTLGITRADVHPRATEHIDEIIDLIKILVEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V GDV++ + +YG+LS Q ++ +AG R+ +K++P DFALWKA K GEP+
Sbjct: 132 YAYEVNGDVYYKTSRFKDYGKLSHQNIDELKAGARIEPGEQKKDPIDFALWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS M+ YL DIHGGG DLIFPHHENEIAQS AA +
Sbjct: 192 WDSPWGKGRPGWHIECSVMAMKYLGETIDIHGGGPDLIFPHHENEIAQSEAATGKPFARF 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
+MH G++ NN+KMSKSLGNFFT+R I + Y P LR F++S+HYR+P+N+S ++ A
Sbjct: 252 FMHVGYLNINNQKMSKSLGNFFTVRDILKTYDPEVLRFFMLSSHYRNPINFSQDLMEQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
+++ + L + ++ + + + E +NKL ++EF M DD NT+
Sbjct: 312 NSL----ERLHNAIYSMEHLESVAQDKDLAEDDEKYLNKLETNKNEFIKAMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F I NM + S +K+ + K+ + LG + G + +
Sbjct: 368 IASLFN-----IVREYNMFVDEN----------SPKKLIVDTKDAILTLGSV-LGLFRKF 411
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+++ L +E++ Q I ER ARK K+++ +D+IR DL +GI L D
Sbjct: 412 MEKT---------LLDEEIEQKIIEREQARKEKNYALADKIRDDLKAQGIILEDTPAGVR 462
Query: 419 WR 420
W+
Sbjct: 463 WK 464
>gi|228898843|ref|ZP_04063125.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
gi|228963190|ref|ZP_04124359.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228796448|gb|EEM43887.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228860743|gb|EEN05121.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
Length = 420
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 246/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + I K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLVE------IEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELTQEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKGRNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|354585447|ref|ZP_09004334.1| cysteinyl-tRNA synthetase [Paenibacillus lactis 154]
gi|353188716|gb|EHB54236.1| cysteinyl-tRNA synthetase [Paenibacillus lactis 154]
Length = 468
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/424 (39%), Positives = 234/424 (55%), Gaps = 36/424 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+A G +++++ + Y D+ L T PRV+D+M+ I + I +++
Sbjct: 74 KMIRKAEQTGTTVPEVADKFIKAYYEDLDGLGIPRATLNPRVTDNMDNIIEFIQDLVDRG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDVFF K YG+LS Q L+ + G R+ VD RK NP DF LWKAAK GE
Sbjct: 134 FAYENGGDVFFRTRKFDGYGKLSQQNLDELQFGIRIEVDKRKENPEDFVLWKAAKPGEIY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ YL DIHGGG DL FPHHE E+AQS A +Y
Sbjct: 194 WSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQFPHHECEVAQSEALTGKPLANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGN ++ + E+Y A+R+F++S HYR+PLN+S ++ A
Sbjct: 254 WMHNGYIRINNEKMSKSLGNGVLVKDLREQYTKEAVRYFMLSTHYRNPLNFSEEVMNQAQ 313
Query: 242 DAVFYIYQTLQDCEVAL-----SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
++V + + + L SP E G+ R + ++ + EFH +M DD NT
Sbjct: 314 NSVERLANAAANVKHRLSAAVGSPDAEAGEEIR------NKMSAVLAEFHQKMQDDFNTP 367
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+T FQ A S N L ++P L E L NE+ VLRI+
Sbjct: 368 DAITAMFQWA-----SEANQL-LQEPSIPAADLREVLDAF-NEMNGVLRIVN-------- 412
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
E+ +E++ +LI ER ARKNK++ ++D+IR L KGI L D +
Sbjct: 413 ----------TGEDEMLDEEIERLIAERVEARKNKNWGRADEIRDLLAAKGIVLEDTAQG 462
Query: 417 TIWR 420
W+
Sbjct: 463 MRWK 466
>gi|419845824|ref|ZP_14369087.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
gi|386414862|gb|EIJ29404.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
Length = 477
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 234/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 91 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIARG 150
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q L+ +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 151 HAYVADNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKNPMDFVLWKMSKENEP 210
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 211 SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 270
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 271 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 330
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + D F M DD NT + L+
Sbjct: 331 QGALERLYTALRGTDQSAVAF-----------GGENFV----DAFREAMDDDFNTPNALS 375
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + E + ++E+ +LGL LQ
Sbjct: 376 VLFEMA-----REINKLKTEYA--------EKANGLAARLRELAGVLGL---------LQ 413
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD++ +D R +LT GI L D T
Sbjct: 414 QDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMGIVLEDGSNGTT 473
Query: 419 WR 420
WR
Sbjct: 474 WR 475
>gi|387902615|ref|YP_006332954.1| cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
gi|387577507|gb|AFJ86223.1| Cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
Length = 465
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/424 (42%), Positives = 238/424 (56%), Gaps = 40/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ SL++R+ D A L P +PR + + Q+ MI Q+ N
Sbjct: 75 KIIRRAVENGESIKSLTDRFIGAMHDDEAALGIQRPDIEPRATQFIPQMLGMIEQLEANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V K NYG+LSG+ L++ RAGERVA + K +P DF LWK AKA +P
Sbjct: 135 YAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDFVLWKRAKAEDP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
SW S +G GRPGWHIECSAM L FDIHGGG DL FPHHENEIAQS A +
Sbjct: 195 EGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENEIAQSEGATGQT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY +R F++ HYRSPLNYS + L
Sbjct: 255 FVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTHYRSPLNYSDVHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A ++ +Y L+D E + A D F A M+DD+NT
Sbjct: 315 DDARASLTRLYTALKDVEP--------------DALALDWNEPYAQRFAAAMNDDINTPV 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A + +N + + +Q KQ L R+ P A+
Sbjct: 361 AVATLFELAGE-VNRTRDASLARQLKQLAGLLGLLGRE----------------PRAF-- 401
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKE 416
LQQ A + L +++ I R AA++ KD++++D+IRA+L GIAL D G
Sbjct: 402 -LQQGAGSA-QAGALAADEIEARIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGS 459
Query: 417 TIWR 420
T WR
Sbjct: 460 TEWR 463
>gi|402299373|ref|ZP_10818984.1| cysteinyl-tRNA ligase [Bacillus alcalophilus ATCC 27647]
gi|401725411|gb|EJS98696.1| cysteinyl-tRNA ligase [Bacillus alcalophilus ATCC 27647]
Length = 465
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/420 (38%), Positives = 237/420 (56%), Gaps = 31/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR A++LGE+ ++NR+ Q Y D L + PRV++ + +I D I Q+++
Sbjct: 74 KIIRAAHELGEDVFEVANRFIQAYHEDTCALGVKEADHHPRVTETIPEIIDFIKQLVDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F K YG+LS Q +++ R+G RV VD+RK +P DFALWK AKAGE S
Sbjct: 134 YAYEADGDVYFRTRKFKGYGKLSSQSIDDLRSGSRVEVDARKEDPLDFALWKDAKAGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM YL DIH GG DL FPHHENEIAQS A + +Y
Sbjct: 194 WKSPWGDGRPGWHIECSAMVKKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTGKTMANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + +NEKMSKSLGNF + +++ P +R F+++AHYRSP+N+S L+ A
Sbjct: 254 WLHNGFINIDNEKMSKSLGNFVLAHDMIQQHSPEVIRFFMLTAHYRSPINFSDELLEGAK 313
Query: 242 DAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ + L+ +L F++ + E I K + F M DD N+++ ++
Sbjct: 314 RGL----ERLKGARESLEHRFKQSADFGEVGDWLEK-IEKAKGRFIEEMDDDFNSANGIS 368
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D K N L + +Q ++++ ++ +E+ VL I
Sbjct: 369 VLF-DLAKEANRYL------REEQTSKKILQAFIEMLDELSAVLGI-------------- 407
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ AE+ + ++ LIEER AR ++F+++D+IR L KGI L D + W+
Sbjct: 408 ----SLAEEAEMLDAEIDDLIEERNEARIARNFARADEIRDFLKEKGIILEDTAQGVRWK 463
>gi|409992104|ref|ZP_11275315.1| cysteinyl-tRNA ligase [Arthrospira platensis str. Paraca]
gi|409937048|gb|EKN78501.1| cysteinyl-tRNA ligase [Arthrospira platensis str. Paraca]
Length = 486
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 245/431 (56%), Gaps = 31/431 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+ RA + +S R+ Y D+ L PRV+DH+++I +I +
Sbjct: 74 KILNRAKEHDSTMEEVSQRFIDAYFEDLRRLNVRDANAYPRVTDHIQEIHQLIDTLTATG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVAVDS----RKRNPADFALWKAA 115
AY V+GDV++ V P+YG+LS ++LE+ + G RVAV +K+NPADFALWKAA
Sbjct: 134 HAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVADPETLKKKNPADFALWKAA 193
Query: 116 KAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ 175
K GEP+WDSPWGPGRPGWHIECSAM L DIHGGG DL+FPHHENEIAQS AA
Sbjct: 194 KPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGGDLVFPHHENEIAQSEAATG 253
Query: 176 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YHPLALRHFLISAHYRSPLNYSV 234
+ YWMHNG VT EKMSKSLGNF TIR++ +R P+ +R F++ HYR PL+++
Sbjct: 254 KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVDPMVVRLFILQGHYRKPLDFTD 313
Query: 235 LQLDSASDAVFYIYQTLQDCEVALSPFQEHGK----TARINPAAEDCINKLRDEFHARMS 290
+ SA++ ++TL+D L Q++G + +P D F M
Sbjct: 314 EAIASANNG----WETLKD---GLLFAQQYGAPLGWSDDSSPGKYDTTEDALQRFRVAMD 366
Query: 291 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 350
DD NT L F+ A K + N+L + Q I ++ K + E+ + GL
Sbjct: 367 DDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTQSDRIYAIWKT---LVELAGVFGL- 421
Query: 351 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
E + Q + A + +++ ++ L+++R +ARK K++++ D+IR L G+ L
Sbjct: 422 ------EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARKAKNYAEGDRIRDQLQASGVTL 474
Query: 411 MDM-GKETIWR 420
+D G ET+WR
Sbjct: 475 IDRPGGETLWR 485
>gi|381208309|ref|ZP_09915380.1| cysteinyl-tRNA synthetase [Lentibacillus sp. Grbi]
Length = 470
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/420 (38%), Positives = 235/420 (55%), Gaps = 30/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II AN+L E ++NR+ + YL D+ L TY PRV++ M+ I I+ +I+
Sbjct: 74 KIINAANELNEQVPDVANRFIEAYLSDVEALGVKKATYNPRVTETMDDIIRFISNLISKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F +YG+LS Q ++ R+G R+ V +K +P DFALWK AK E +
Sbjct: 134 YAYEVDGDVYFKPRSFDDYGKLSHQSIDELRSGARIQVGEKKEDPLDFALWKKAKDDEIA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + +Y
Sbjct: 194 WDSPWGQGRPGWHIECSAMAKKYLGETIDIHAGGQDLTFPHHENEIAQSEAMTEKPFANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++ P +R F++S HYR+P+N++ L A
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFVLTKDIISQHDPQVIRFFMLSVHYRNPINFTEELLQGAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+++ I + E Q + A + I++L ++F A M DD NT++ ++
Sbjct: 314 NSLDRIKNAWTNLE---HRSQSSMDLTDKSNAWLEKISQLHNQFEAAMDDDFNTANAISV 370
Query: 302 AFQDALKFINSSLNM-LKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + N+ L++KQ +R + + VL +LG+
Sbjct: 371 LFE-----LTKEANVYLEEKQTDTH------VIRAFQESMNTVLDVLGI----------- 408
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ L +ED+ L++ R ARKN+DF ++D+IR L K I L D + T W+
Sbjct: 409 ----RMETEEPLLDEDIEALLKARTEARKNRDFGRADEIRDALKGKNIILEDTPQGTRWK 464
>gi|229176690|ref|ZP_04304094.1| Cysteinyl-tRNA synthetase [Bacillus cereus 172560W]
gi|228606733|gb|EEK64150.1| Cysteinyl-tRNA synthetase [Bacillus cereus 172560W]
Length = 420
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 244/422 (57%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I I +++N
Sbjct: 29 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIKFIQELVNKG 88
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 89 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 148
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 149 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 208
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 209 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 268
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N I K + F M+DD NT++
Sbjct: 269 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLSEIEKFQTAFEEAMNDDFNTANA 322
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 323 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 363
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 364 -------ELSKEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 416
Query: 419 WR 420
W+
Sbjct: 417 WK 418
>gi|145298606|ref|YP_001141447.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418360744|ref|ZP_12961412.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142851378|gb|ABO89699.1| Cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356688048|gb|EHI52617.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 458
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 238/422 (56%), Gaps = 41/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + L+ R + D L + P +PR + H+ +I +++ +I D
Sbjct: 73 KIIKRAAETNVTCDDLTERLIGDMHQDFDALGMVRPDVEPRATQHISEIIELVESLIAQD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVGVVDAKRNPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y ++R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAESVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D VA + + + AR A M DD NT +
Sbjct: 313 RAALERMYTALRDLPVAAAAGGDE-QVARFVDA---------------MDDDFNTPEAYS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K + +S+ L ++E+ +LG +LQ
Sbjct: 357 ALF-DLVREIN---------RQKAEDMSVAAGLGA---RLRELGAVLG---------ILQ 394
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D LK E EE ++ +LI ER AR +K+++ +D RA LT GI L D +T
Sbjct: 395 QDPDAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARARLTEMGIVLEDSAGKTS 454
Query: 419 WR 420
WR
Sbjct: 455 WR 456
>gi|84391753|ref|ZP_00991655.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
gi|84376466|gb|EAP93345.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
Length = 461
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 239/422 (56%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++ + +I +++ ++I
Sbjct: 73 KIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEIVELVEKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF LWK +K GEP
Sbjct: 133 FAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ +V +P E+ + + F M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDVTAAP-----------AGGEEYVTR----FSTAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ A +N +K + +E + ++E+ I+G+L P A+ +
Sbjct: 358 VLFEMA-----REINRIKTES--------VEKASALGALMRELADIIGILHQDPEAFLQ- 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
D A E+ E + LI+ R +R +KD++ +D R L GI L D + T
Sbjct: 404 ----GDAAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNELGIVLEDGPEGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|443470479|ref|ZP_21060579.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|443473065|ref|ZP_21063090.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442900156|gb|ELS26408.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442903628|gb|ELS28919.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
Length = 462
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 230/422 (54%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE L +R D A L L P +PR + H+ + +MI +I+
Sbjct: 75 KIIRRAQENGEPFEVLVDRMIAAMHEDEARLSVLRPDIEPRATGHIAGMHEMIQTLIDKG 134
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V + YG+LS +R++ + G R+ VD K +P DF LWK AK GEP
Sbjct: 135 FAYAPGNGDVYYRVGRFEGYGKLSRRRIDELKIGARIEVDESKEDPLDFVLWKGAKPGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS AA
Sbjct: 195 SWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATGKLYAK 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYRSP+NYS L A
Sbjct: 255 AWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSPINYSEESLKEA 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A++P AR F A M DD N+
Sbjct: 315 KGALERFYNGLKGLP-AVAPAGGEAFVAR---------------FGAAMDDDFNSPEACA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ + +N L++ ++ + ++K + +LG+L P A+
Sbjct: 359 VLFE-----MIREVNRLREVD--------VQVAAGLAAQLKSMAAVLGVLQLEPDAF--- 402
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L+ A + + E D L I+ R AAR K++++SD+IR LT G+ L D T
Sbjct: 403 ---LQAGAAGKVDAAEVDAL--IQARLAARAEKNWAESDRIRDRLTAMGVVLEDGKGGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|134296083|ref|YP_001119818.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|166200137|sp|A4JFD0.1|SYC_BURVG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134139240|gb|ABO54983.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 465
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/424 (42%), Positives = 238/424 (56%), Gaps = 40/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ SL++R+ D A L P +PR + + Q+ MI Q+ N
Sbjct: 75 KIIRRAVENGESIKSLTDRFIGAMHDDEAALGIQRPDIEPRATQFIPQMLGMIEQLEANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V K NYG+LSG+ L++ RAGERVA + K +P DF LWK AKA +P
Sbjct: 135 YAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDFVLWKRAKAEDP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
SW S +G GRPGWHIECSAM L FDIHGGG DL FPHHENEIAQS A +
Sbjct: 195 EGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENEIAQSEGATGQT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY +R F++ HYRSPLNYS + L
Sbjct: 255 FVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRFFIVRTHYRSPLNYSDVHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A ++ +Y L+D E + A D F A M+DD+NT
Sbjct: 315 DDARASLTRLYTALKDVEP--------------DALALDWNEPYAQRFAAAMNDDINTPV 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A + +N + + +Q KQ L R+ P A+
Sbjct: 361 AVATLFELAGE-VNRTRDASLARQLKQLAGLLGLLGRE----------------PRAF-- 401
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKE 416
LQQ A A L +++ I R AA++ KD++++D+IRA+L GIAL D G
Sbjct: 402 -LQQGAGSAHAGA-LAADEIEARIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGS 459
Query: 417 TIWR 420
T WR
Sbjct: 460 TEWR 463
>gi|423638093|ref|ZP_17613745.1| cysteinyl-tRNA synthetase [Bacillus cereus VD156]
gi|401271817|gb|EJR77820.1| cysteinyl-tRNA synthetase [Bacillus cereus VD156]
Length = 465
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N I K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEIEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELSKEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|30018360|ref|NP_829991.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|218235383|ref|YP_002364939.1| cysteinyl-tRNA synthetase [Bacillus cereus B4264]
gi|365164064|ref|ZP_09360150.1| cysteinyl-tRNA synthetase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423416010|ref|ZP_17393130.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3O-2]
gi|423428196|ref|ZP_17405200.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4O-1]
gi|423439455|ref|ZP_17416393.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X12-1]
gi|423590623|ref|ZP_17566685.1| cysteinyl-tRNA synthetase [Bacillus cereus VD045]
gi|423631999|ref|ZP_17607745.1| cysteinyl-tRNA synthetase [Bacillus cereus VD154]
gi|423645091|ref|ZP_17620707.1| cysteinyl-tRNA synthetase [Bacillus cereus VD166]
gi|423646225|ref|ZP_17621795.1| cysteinyl-tRNA synthetase [Bacillus cereus VD169]
gi|423653024|ref|ZP_17628323.1| cysteinyl-tRNA synthetase [Bacillus cereus VD200]
gi|33301673|sp|Q81J59.1|SYC_BACCR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735047|sp|B7HJ28.1|SYC_BACC4 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|29893900|gb|AAP07192.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|218163340|gb|ACK63332.1| cysteine--tRNA ligase [Bacillus cereus B4264]
gi|363613365|gb|EHL64882.1| cysteinyl-tRNA synthetase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401094457|gb|EJQ02538.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3O-2]
gi|401112809|gb|EJQ20683.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X12-1]
gi|401127118|gb|EJQ34847.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4O-1]
gi|401220260|gb|EJR26902.1| cysteinyl-tRNA synthetase [Bacillus cereus VD045]
gi|401262718|gb|EJR68856.1| cysteinyl-tRNA synthetase [Bacillus cereus VD154]
gi|401267786|gb|EJR73842.1| cysteinyl-tRNA synthetase [Bacillus cereus VD166]
gi|401287854|gb|EJR93621.1| cysteinyl-tRNA synthetase [Bacillus cereus VD169]
gi|401303132|gb|EJS08695.1| cysteinyl-tRNA synthetase [Bacillus cereus VD200]
Length = 465
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N I K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEIEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELSKEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|358638097|dbj|BAL25394.1| cysteinyl-tRNA synthetase [Azoarcus sp. KH32C]
Length = 437
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/425 (39%), Positives = 235/425 (55%), Gaps = 44/425 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ L++R+ D L P ++PR ++ + Q++ +I ++ +
Sbjct: 49 KIIRRAQENGESIRDLTDRFIAAMHEDADALGVQRPNHEPRATEFVPQMQSLIGRLYDKG 108
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E DV +AV K YG+LSG+ L+ RAGERV + KR+P DF LWK A+ EP
Sbjct: 109 LAYVAENRDVCYAVRKFEGYGKLSGKTLDELRAGERVEIVGEKRDPLDFVLWKHARVEEP 168
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ W+SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENE+AQS A +
Sbjct: 169 AEVKWNSPWGDGRPGWHIECSAMSSQLLGEHFDIHGGGQDLQFPHHENEVAQSEGAHGHA 228
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y P +R F++ AHYRSPLNYS L
Sbjct: 229 FVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKQYDPEVVRFFILRAHYRSPLNYSDAHL 288
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A ++ +Y L++ + A D F A M DD NT+
Sbjct: 289 DDARQSLTRLYTALRNVKTA--------------GGGVDWTESHAQRFRAAMDDDFNTAE 334
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAY 355
+ F + + +N + Q +K + +LGLL P +
Sbjct: 335 AVAVLFD-----LANEVNRTGSESTAAQ--------------LKGLAGVLGLLEREPQVF 375
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
+ + A + + I +RA A+K ++F+++D+IRA+L +G+ L D +
Sbjct: 376 LQGGIGGQGGDADTAAIEAQ-----IAQRAEAKKARNFAEADRIRAELLAQGVVLEDSAQ 430
Query: 416 ETIWR 420
TIWR
Sbjct: 431 GTIWR 435
>gi|402562819|ref|YP_006605543.1| cysteinyl-tRNA ligase [Bacillus thuringiensis HD-771]
gi|434378732|ref|YP_006613376.1| cysteinyl-tRNA ligase [Bacillus thuringiensis HD-789]
gi|401791471|gb|AFQ17510.1| cysteinyl-tRNA ligase [Bacillus thuringiensis HD-771]
gi|401877289|gb|AFQ29456.1| cysteinyl-tRNA ligase [Bacillus thuringiensis HD-789]
Length = 465
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 246/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + I K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLVE------IEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELTQEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKGRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
Length = 459
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 234/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D L L P ++PR + H+ +I ++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEITAIVEKLIQRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A + V+
Sbjct: 193 SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGNQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + D F M DD NT + L+
Sbjct: 313 HGALERLYTALRGTDKSAVAF-----------GGENFV----DAFREAMDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ I LN LK + + + ++E+ ILGLL
Sbjct: 358 VLFE-----IARELNKLKTQD--------MAKANGLAARLRELAAILGLL---------- 394
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
QL + +A E++V + LI++R AR KD+ +D R LT+ GI L D T
Sbjct: 395 QLDPEQFLQASSDEDEVAKIEALIKQRNEARVAKDWPAADAARNALTQMGIVLEDGPNGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|145639628|ref|ZP_01795231.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145642163|ref|ZP_01797732.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|145271185|gb|EDK11099.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145273154|gb|EDK13031.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
gi|309750601|gb|ADO80585.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2866]
Length = 459
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 234/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGADQSAVVF-----------GGENFVETFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + +E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD+ +D R +LT GI L D T
Sbjct: 396 QDPEKFLQAGSNDDEVAKIEALIKQRNEARAAKDWPAADAARNELTAMGIVLEDGPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|423422323|ref|ZP_17399354.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
gi|401120040|gb|EJQ27841.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
Length = 465
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N I K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEIEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELSKEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|303228928|ref|ZP_07315738.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|302516342|gb|EFL58274.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
Length = 482
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 239/429 (55%), Gaps = 35/429 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G ++NRY Y M L PRVS H+ I MI +I+
Sbjct: 75 KIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDILKMIETLIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFALWKAAK GEP
Sbjct: 135 YAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPF 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS C+ S V
Sbjct: 195 WESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQSEGCSGHHPS-V 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 254 KYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEE 313
Query: 240 ASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDL 293
A+ ++ + L+ CE P + R+ A++ +EF A MSDD
Sbjct: 314 ANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YEEEFEAAMSDDF 364
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLIESLRKIENEVKEVLRILGLLP 351
NT+ + F A K IN ++ ++ Q ++ ++ + K EV VL
Sbjct: 365 NTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAEVKRIFKFMTEVIGVLEKAWEGN 423
Query: 352 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
GA + +QL D L R A R+ K ++ +D IR L GI +
Sbjct: 424 TGADAAEYEQLMDVILSV--------------RQACREQKQWALADCIRDRLAEIGITIE 469
Query: 412 DMGKETIWR 420
D W+
Sbjct: 470 DSPTGARWK 478
>gi|148827229|ref|YP_001291982.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|187629826|sp|A5UFP3.1|SYC_HAEIG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148718471|gb|ABQ99598.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
Length = 459
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 234/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGADQSAVVF-----------GGENFVETFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + +E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD+ +D R +LT GI L D T
Sbjct: 396 QDPEKFLQAGSDDDEVAKIEVLIKQRNEARAAKDWPVADAARNELTAMGIVLEDGPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|386756675|ref|YP_006229891.1| cysteinyl-tRNA synthetase [Bacillus sp. JS]
gi|384929957|gb|AFI26635.1| cysteinyl-tRNA synthetase [Bacillus sp. JS]
Length = 466
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 228/424 (53%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+ I + + Q++
Sbjct: 74 KLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMDAIIEFVDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
A + A S Q H + N +D + + R F M DD NT+
Sbjct: 314 SA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRKAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L K + I+ +I + +LG
Sbjct: 366 NAISVLF-DLAKHANYYLQ--KDHTADHVITAFIQMFDRI-------VSVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|344199257|ref|YP_004783583.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
gi|343774701|gb|AEM47257.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
Length = 462
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/421 (42%), Positives = 236/421 (56%), Gaps = 40/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ SL+ R+ D A L C P +PR ++H+ ++ +I ++IN
Sbjct: 78 KIIRRAVERGESIQSLTARFIDAMHEDEAALLCQRPDQEPRATEHVGAMQTLIGELINRG 137
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV P YGRLSG+ ++ +G RV V KR+P DFALWKAAK GEP
Sbjct: 138 HAYAAANGDVYYAVRSFPEYGRLSGKSIDELTSGARVDVGEDKRDPLDFALWKAAKPGEP 197
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS-CAACQDSNV 179
SW SPWG GRPGWHIECSAMSA L FDIHGGG DL FPHHENEIAQS A C ++
Sbjct: 198 SWPSPWGEGRPGWHIECSAMSADALGCAFDIHGGGADLQFPHHENEIAQSQGAGCAFAH- 256
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YWMHNG V N+EKMSKSL NFFT+R++ RY LR F++S+HYRSPLNY L+
Sbjct: 257 -YWMHNGFVRINDEKMSKSLNNFFTVRELLPRYSGEVLRFFILSSHYRSPLNYGEEALEQ 315
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A + +Y L+ G+ + +E R+ FHA MSDD +T L
Sbjct: 316 AKAGLTRLYTALRGMP---------GRKIVVELGSE-----WRERFHAAMSDDFHTPAAL 361
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F + +N L+ + E + ++E+ +LGL L
Sbjct: 362 AVLFD-----LAREMNRLRDEGS--------EVAAPLATLLRELAGVLGL---------L 399
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
QQ + L+ + + I RAAAR+ +DF+ +D IR +LT G+ L D T W
Sbjct: 400 QQDAEDFLRGDATNTHWIEERIAARAAARRTRDFAGADGIRQELTAAGVILEDGPGGTTW 459
Query: 420 R 420
R
Sbjct: 460 R 460
>gi|89093601|ref|ZP_01166548.1| Cysteinyl-tRNA synthetase, class Ia [Neptuniibacter caesariensis]
gi|89081997|gb|EAR61222.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
Length = 461
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/421 (40%), Positives = 235/421 (55%), Gaps = 39/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE P L+ R D A L L PT +PR + H+ I ++ +I
Sbjct: 73 KIIKRAAENGEEPHELTERMIAAMHEDEARLSVLRPTQEPRATAHIGDIISLVETLIEKG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ VEK +YG+L+ + ++ + G R+ V+ K +P DF LWK+AK GE
Sbjct: 133 FAYPAANGDVYYRVEKFADYGKLTNKNVDELKTGARIEVEEAKESPLDFVLWKSAKEGEV 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAMS L + FDIHGGG DL FPHHENEIAQS AA + V+
Sbjct: 193 SWDSPWGKGRPGWHIECSAMSKCCLGNTFDIHGGGPDLPFPHHENEIAQSEAANGCTYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V N+EKMSKSLGNFFTIR + E+Y+ +R FL HYR+ ++YS L A
Sbjct: 253 TWMHAGPVRVNSEKMSKSLGNFFTIRDVLEKYNAEVVRFFLARVHYRTYIDYSEDSLKEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ YQ L+ + P + N + F A M+DD NT ++
Sbjct: 313 RVMLERFYQALRGVDAVEGPLE----------------NDFEERFIAAMNDDFNTPKAVS 356
Query: 301 GAFQDALKFINSSLNMLKK--KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
F+ +N L K ++ + +L LRK+ +LGLL A E
Sbjct: 357 VMFE--------LVNELNKATREGASEAPALAAQLRKLGG-------MLGLLQQNA-DEF 400
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ ++ L+ E++ QLI +RA A+K K+F+++D+IR DL +GI L D + T
Sbjct: 401 LQGESEE----GGLSNEEIEQLIVDRAEAKKAKNFAEADKIRDDLASQGIILKDSREGTS 456
Query: 419 W 419
W
Sbjct: 457 W 457
>gi|419801786|ref|ZP_14327000.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
gi|385193165|gb|EIF40546.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
Length = 459
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 234/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIARG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q L +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLNQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVAF-----------GGENFVEAFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK ++ E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTEEA--------EKANGLAARLRELAGILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD++ +D R +LT GI L D T
Sbjct: 396 QDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMGIVLEDGANGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|390934101|ref|YP_006391606.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569602|gb|AFK86007.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 464
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 238/419 (56%), Gaps = 28/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+R+++ L++RY EY D L T+ PR ++++E+I + + ++I+
Sbjct: 72 KLIKRSHEENTTVKELADRYIDEYFKDADSLGIKRATFHPRATENIEEIIEFVKKLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +G+V++ K +YG+LS + ++ +AG R+ V+ K+NP DF LWKAAK GEP
Sbjct: 132 FAYEKDGNVYYDTTKFKDYGKLSHKNIDELKAGARIEVNEDKKNPTDFVLWKAAKEGEPY 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL DIH GG DLIFPHHENEIAQS AA Y
Sbjct: 192 WDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEAANDAEFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G++ NNEKMSKS NFFT+R + +Y P LR F++ +HYR+P+NYS ++ A
Sbjct: 252 WMHIGYLNINNEKMSKSKNNFFTVRDVISQYDPEVLRFFMLMSHYRNPINYSQDLIEQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ T+ + L E + A ++ + + +F M DD NT+ ++
Sbjct: 312 GGFLRLSNTVYNLRHLLD-VAEDRQLRDEEKAYKEKYEEYKRKFEEAMDDDFNTADAISV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ ++ INS+++ K+ + L + SL +LG+
Sbjct: 371 IFE-MVRDINSNIDGNSPKELIKYILDVFLSLSS----------VLGI------------ 407
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
K+ +L ++++ +LIE+R ARK K+++++D+IR +L ++GI L D W+
Sbjct: 408 ----TYKKKDLLDDEIKELIEKRQEARKAKNWAEADRIRDELKKQGIVLEDTPNGVRWK 462
>gi|421896923|ref|ZP_16327318.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
gi|206588088|emb|CAQ18668.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
Length = 465
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 238/426 (55%), Gaps = 44/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE +L++R+ D L P ++PR ++++ Q+ MI ++ N
Sbjct: 75 KIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQMLSMIGKLQANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P DF LWK+AKA EP
Sbjct: 135 LAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLDFVLWKSAKADEP 194
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHENEIAQ+ A +
Sbjct: 195 AESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHENEIAQAEGANGST 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +HYRS LNYS L
Sbjct: 255 FVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSHYRSDLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A A+ +Y L+D A+ A D F M+DD NT
Sbjct: 315 DDARHALTRLYTALKDVPAAVG-------------AKPDWSESHGQRFREAMNDDFNTPV 361
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAY 355
+ F+ + S +N K + P + N++ + ++GLL P A+
Sbjct: 362 AMAVLFE-----LASEVN--KTRSP------------ALVNQLAALGGVMGLLGRDPHAF 402
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-G 414
LQ A + E V IE R A+ +DF+++D IRADL GI L D G
Sbjct: 403 ---LQGGVGAAADGLDTVE--VEARIEARRVAKAARDFARADGIRADLLAAGIVLEDKPG 457
Query: 415 KETIWR 420
T WR
Sbjct: 458 GVTEWR 463
>gi|92114173|ref|YP_574101.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
gi|123084029|sp|Q1QVV6.1|SYC_CHRSD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91797263|gb|ABE59402.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
Length = 461
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 228/419 (54%), Gaps = 35/419 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA + E +L+ R D L L P +PR + H++ I M+ ++I+
Sbjct: 72 KILKRAEENDEPIAALTERMIAAMHEDEGRLGVLRPDREPRATAHVDDIVAMVQRLIDKG 131
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V + YG+LS + L++ RAG RV V++ K +P DF LWKAAK GE
Sbjct: 132 YAYPAANGDVYYRVRRFEGYGKLSNRDLDDMRAGSRVEVETAKEDPLDFVLWKAAKPGEA 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS L FDIHGGG DL+FPHHENEIAQS AA V+
Sbjct: 192 SWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLVFPHHENEIAQSEAATGRPYVN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V + EKMSKSLGNFFTIR++ E + P +R+ L+++HYRSP+NY+ L A
Sbjct: 252 TWMHAGAVRVDQEKMSKSLGNFFTIREVLEAHAPEVVRYLLLASHYRSPINYAPDALSDA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ Y LQ + P A + R+ F A M DD NT+ L
Sbjct: 312 RRSLERFYNALQG----------------VAPVAGEVAAGYRERFIAAMDDDFNTAEALA 355
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + LN K++ P +E+KE+ +LGL + + +
Sbjct: 356 VLFD-----LARELNRAKQEAPAHAPAL--------AHELKELGGVLGL-----FGQDPE 397
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
R ++EED+ IE RA A+K KDF+ +D IR +L GI L D T W
Sbjct: 398 GFLQAGAGRLPMSEEDIEARIEARAQAKKAKDFATADGIRDELAALGIVLKDGRDGTTW 456
>gi|303231487|ref|ZP_07318217.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
gi|302513830|gb|EFL55842.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
Length = 482
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 239/429 (55%), Gaps = 35/429 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G ++NRY Y M L PRVS H+ I MI +I+
Sbjct: 75 KIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDILKMIETLIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFALWKAAK GEP
Sbjct: 135 YAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPF 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS C+ S V
Sbjct: 195 WESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQSEGCSGHHPS-V 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 254 KYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEE 313
Query: 240 ASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDL 293
A+ ++ + L+ CE P + R+ A++ +EF A MSDD
Sbjct: 314 ANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YEEEFEAAMSDDF 364
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLIESLRKIENEVKEVLRILGLLP 351
NT+ + F A K IN ++ ++ Q ++ ++ + K EV VL
Sbjct: 365 NTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAEVKRIFKFMTEVIGVLEKAWEGN 423
Query: 352 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
GA + +QL D L R A R+ K ++ +D IR L GI +
Sbjct: 424 TGADAAEYEQLMDVILSV--------------RQACREQKQWALADCIRDRLAEIGITIE 469
Query: 412 DMGKETIWR 420
D W+
Sbjct: 470 DSPAGARWK 478
>gi|218709995|ref|YP_002417616.1| cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
gi|254781698|sp|B7VGZ1.1|SYC_VIBSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218323014|emb|CAV19191.1| Cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
Length = 461
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 239/422 (56%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++ + +I +++ ++I
Sbjct: 73 KIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEIIELVEKLIQRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V+K YG+LS Q L+ +AG RV +DS KR+P DF LWK +K GEP
Sbjct: 133 FAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDIDSAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ +V +P E+ + + F M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDVTAAP-----------AGGEEYVTR----FSTAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ A +N +K + IE + ++E+ I+G+L P A+ +
Sbjct: 358 VLFEMA-----REINRIKTES--------IEKASALGALMRELADIIGILHQDPEAFLQ- 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
D A E+ E + LI+ R +R +KD++ +D R L GI L D + T
Sbjct: 404 ----GDAAGNDDEVAE--IEGLIKLRNDSRASKDWANADLARDKLNELGIVLEDGPEGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|385856089|ref|YP_005902602.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
gi|325205030|gb|ADZ00484.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
Length = 473
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/438 (40%), Positives = 234/438 (53%), Gaps = 58/438 (13%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE L+ R+ Q D L L P +P+ ++++ Q+ MI +I N
Sbjct: 73 KIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV + YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP
Sbjct: 133 KAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD---- 176
+W+SPWG GRPGWHIECSAMS + FDIHGGG DL FPHHENEIAQS A
Sbjct: 193 AWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGH 252
Query: 177 ------------SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
S+V YW+HNG + + EKMSKSLGNFFTIR++ ++Y +R F++ A
Sbjct: 253 NHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDLEVVRFFILRA 312
Query: 225 HYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE 284
HYRSPLNYS LD A A+ +Y TL++ A E+ N
Sbjct: 313 HYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENA-------------NGYTRR 359
Query: 285 FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVL 344
F+A M+DD T + F+ L + K L L+ +
Sbjct: 360 FYAAMNDDFGTVEAVAVLFE------------LAGEVNKTNDAQLAGCLKALGG------ 401
Query: 345 RILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRAD 402
I+GLL P A+ L+ A L+ E++ LI R AR +K++++SD+IR
Sbjct: 402 -IIGLLQRDPTAF------LQGSAASDG-LSNEEIEDLIARRKQARADKNWAESDRIRDL 453
Query: 403 LTRKGIALMDMGKETIWR 420
L I L D T WR
Sbjct: 454 LNEHKIILEDNAGGTTWR 471
>gi|390456401|ref|ZP_10241929.1| cysteinyl-tRNA ligase [Paenibacillus peoriae KCTC 3763]
Length = 467
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/419 (38%), Positives = 242/419 (57%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+A +L +++ ++ Y D+ L + PRV++ ME I D I ++++ D
Sbjct: 74 KLIRKARELDMEVPAVAEKFIAAYHEDLTGLNVPAASINPRVTESMELIIDFIKELVDKD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDVF+ +K +YG+LSGQ LE + G R+ VD RK N DF LWKAAK GE
Sbjct: 134 YAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRIHVDERKENAEDFVLWKAAKPGEIY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ HYL DIHGGG DL FPHHE E AQS A Y
Sbjct: 194 WSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPHHECECAQSEAITGKPLARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGN ++ + R+ P ALR+F++S HYR+PLNY+ + A
Sbjct: 254 WMHNGYIRIDNEKMSKSLGNGILVKDLRARHKPEALRYFMLSTHYRNPLNYNQETMSQAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++V I + + + L+ + + ++ + ++ + +F +M DD NT +T
Sbjct: 314 NSVERIANAVANVKHRLANALKGDE--EVSAELQTKLDGILQQFGEKMDDDFNTPDAITA 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ +++ + ++L++ Q +L +++ + +VLRI YSE +++
Sbjct: 372 VFE----WVSEANHLLQRDVVNQAEL---KAVLHTFYSMNKVLRI--------YSEPVEE 416
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L D +++ QLI ER ARK K++ ++D+IR L KGI L D + WR
Sbjct: 417 LLD----------DEIEQLIAERVEARKTKNWGRADEIRDLLAAKGIVLEDTAQGMRWR 465
>gi|416893541|ref|ZP_11924691.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
gi|347813831|gb|EGY30484.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
Length = 469
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 234/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D L L P ++PR + H+ +I ++ ++I
Sbjct: 83 KIIKRALENKETCDQLVDRMVVEMYKDFDSLNILRPDFEPRATHHIPEIIAIVEKLIQRG 142
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 143 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEP 202
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A + V+
Sbjct: 203 SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGNQYVN 262
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + N EKMSKSLGNFFTIR + Y ++R+FL++AHYRS LNYS L+ A
Sbjct: 263 YWLHSGMIMVNKEKMSKSLGNFFTIRDVLSHYDAESVRYFLLTAHYRSQLNYSEENLNLA 322
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ ++ RD M DD NT + L+
Sbjct: 323 HGALERLYTALRGIDKSAVAF-----------GGENFVDAFRDA----MDDDFNTPNALS 367
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A LN LK + + + ++E+ ILGLL
Sbjct: 368 VLFEMA-----RELNKLKTED--------MAKANGLAARLRELAGILGLL---------- 404
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
QL + +A +++V + LI++R AR KD+ +D R LT GI L D T
Sbjct: 405 QLDPEQFLQAGSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTEMGIVLEDGPNGT 464
Query: 418 IWR 420
WR
Sbjct: 465 TWR 467
>gi|170760749|ref|YP_001788843.1| cysteinyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
Maree]
gi|229558627|sp|B1KTA5.1|SYC_CLOBM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169407738|gb|ACA56149.1| cysteine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
Length = 465
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 241/420 (57%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L +R+ +EY D DL T PR ++ ME+I ++ +I
Sbjct: 72 KMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEIIKFVSDLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA+WK K GEP+
Sbjct: 132 YAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGSRINVDERKKDPMDFAIWKNQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQSEARTGKQFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +N+S+ LDS
Sbjct: 252 WLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQINFSMELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++ + E L + E + + E + K ++++ +M DD NT+ ++
Sbjct: 312 AALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKMDDDFNTADAIS 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N+++ + K+ + L LI +E+ LG+L + + +
Sbjct: 370 VIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGNPLGILQESTKASLEE 418
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+++ +R + ARK K+++ +D+IR DL +GI L D + W+
Sbjct: 419 EIEKLIEERQK---------------ARKEKNWALADKIRDDLKERGIVLEDTPQGVRWK 463
>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 482
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/425 (40%), Positives = 245/425 (57%), Gaps = 31/425 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA D GE+ L++R+ + D +L C P +P+ +D + Q++ +I + + +
Sbjct: 81 KIINRAKDNGESIYELTDRFIKAMHEDADNLGCERPNSEPKATDFIPQMQHLIQTLESKN 140
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRKRNPADFALWKAAKAG 118
AY GDV++AVE YG+LS +RL + +AG ERV V++ K+NP DF LWK+AK
Sbjct: 141 LAYQGATGDVYYAVENFAEYGKLSKRRLADMQAGASERVNVETDKKNPFDFVLWKSAKQT 200
Query: 119 EPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ 175
EPS W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A
Sbjct: 201 EPSETKWQSPWGVGRPGWHIECSAMSTCCLGDTFDIHGGGHDLQFPHHENEIAQSEGATG 260
Query: 176 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVL 235
+ + WMH G + + EKMSKSLGNFFTIR + ++HP +R F++S+HYRSP+N+S
Sbjct: 261 KTYANNWMHVGFINVDGEKMSKSLGNFFTIRDVMGQFHPETIRFFILSSHYRSPVNFSDS 320
Query: 236 QLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNT 295
L A ++ +YQ L+ E P E +T P F+ M DD N+
Sbjct: 321 ALKEAQTSLTRLYQALKSVESLTEPAGEIDETPFETP------------FNQAMCDDFNS 368
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ ++ F A + IN ++N+ + + +L + ++ + L IL L P
Sbjct: 369 AGAVSVLFSLARE-INKAVNL-----ETVEGNAQALALATLLKDLAQPLNILQLNP---- 418
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
++ LQ K + L++ ++ IE R A+ +KDF+K+DQIR+DL +GI L D
Sbjct: 419 TDFLQA---KVGETTGLSDSEIEAFIEARKQAKADKDFAKADQIRSDLKAQGIELEDGKN 475
Query: 416 ETIWR 420
T WR
Sbjct: 476 GTTWR 480
>gi|333908247|ref|YP_004481833.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
gi|333478253|gb|AEF54914.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
Length = 460
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 236/419 (56%), Gaps = 35/419 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E +L+ R D L P +P+ ++ M+QI DM+ +I+
Sbjct: 73 KIIKRAEENNETTQALTERMIAAQREDELRLGNKMPDREPKATEFMQQIIDMVQVLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ YG+L+ ++LE+ AG R+ V++ K +PADF LWK AK GE
Sbjct: 133 FAYQGTSGDVYYRATAFKEYGKLNNRKLEDMLAGARIDVETAKEHPADFVLWKQAKVGEV 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAMS + L S FDIHGGG DL FPHHENEIAQS AA V+
Sbjct: 193 AWESPWGLGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFPHHENEIAQSEAATGKDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V NNEKMSKSLGNFFT+R + E+Y+P +R+ ++S+ YRSP++YS L+ A
Sbjct: 253 YWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPEVVRYLMVSSQYRSPIDYSDQSLNEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ VA + TAR F M DD NT ++
Sbjct: 313 KVALERLYTALRQQSVA-EEWVASEYTAR---------------FEEAMQDDFNTPVAVS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + LN K ++ + + E+K + +LGLL +V +
Sbjct: 357 VLFE-----LVRELNKAKAEESDKAA--------NLAAELKSLASLLGLL-----DQVPE 398
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ A L E + LI+ER ARK+K+F++SD+IR L +GI L+D + T W
Sbjct: 399 YFLQNSTITAGLDESAIQALIDERTQARKDKNFARSDEIRDQLADQGIELLDSREGTTW 457
>gi|387819784|ref|YP_005680131.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
gi|322807828|emb|CBZ05403.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
Length = 465
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 242/420 (57%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L +R+ +EY D DL T PR ++ ME+I ++ +I
Sbjct: 72 KMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEIIKFVSDLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA+WK+ K GEP+
Sbjct: 132 YAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFAIWKSQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQSEARTGKQFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NN+KMSKSL NFFT RQI E+Y LR F++S HYR+ +N+S+ LDS
Sbjct: 252 WLHSAFVNVNNQKMSKSLNNFFTARQILEKYDADVLRMFMLSGHYRTQINFSMELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++ + E L + E + + E + K ++++ +M DD NT+ ++
Sbjct: 312 AALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKMDDDFNTADAIS 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N+++ + K+ + L LI +E+ LG+L + + +
Sbjct: 370 VIF-DLIRDVNTNVTIESSKEIVKYTLDLI----------RELGSPLGILQESTKASLEE 418
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+++ +R + ARK K+++ +D+IR +L +GI L D + W+
Sbjct: 419 EIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIVLEDTPQGVRWK 463
>gi|429759537|ref|ZP_19292035.1| cysteine--tRNA ligase [Veillonella atypica KON]
gi|429179498|gb|EKY20745.1| cysteine--tRNA ligase [Veillonella atypica KON]
Length = 488
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 239/429 (55%), Gaps = 35/429 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G ++NRY Y M L PRVS H+ I MI +I+
Sbjct: 81 KIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDILKMIETLIDKG 140
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFALWKAAK GEP
Sbjct: 141 YAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPF 200
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS C+ S V
Sbjct: 201 WESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQSEGCSGHHPS-V 259
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 260 KYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEE 319
Query: 240 ASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDL 293
A+ ++ + L+ CE P + R+ A++ +EF A MSDD
Sbjct: 320 ANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YEEEFEAAMSDDF 370
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLIESLRKIENEVKEVLRILGLLP 351
NT+ + F A K IN ++ ++ Q ++ ++ + K EV VL
Sbjct: 371 NTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAEVKRIFKFMTEVIGVLEKAWEGN 429
Query: 352 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
GA + +QL D L R A R+ K ++ +D IR L GI +
Sbjct: 430 TGADAVEYEQLMDVILSV--------------RQACREQKQWALADCIRDRLAEIGITIE 475
Query: 412 DMGKETIWR 420
D W+
Sbjct: 476 DSPAGARWK 484
>gi|257464496|ref|ZP_05628867.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
gi|257450156|gb|EEV24199.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
Length = 459
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 235/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D L L P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENKETCDQLVDRMIAEMHKDFDALNILRPDVEPRATKHIPEIIAMVEKLIANG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K EP
Sbjct: 133 HAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS L+YSV LD A
Sbjct: 253 YWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSLLDYSVENLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ C+V S E G+ + F M DD NT L
Sbjct: 313 RSALERLYTSLRGCDV--SGVAEGGE-------------HYVEAFKTAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLK-KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ I LN LK + K L++ +KE+ +LGL L
Sbjct: 358 VLFE-----IARELNKLKIEDMAKANGLAV---------RLKELAGVLGL---------L 394
Query: 360 QQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+Q + L+ ++E ++ LI++R A+ NK+++ +D++R L I L D T
Sbjct: 395 EQEPESFLQGDTNSDEAAEIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVLEDTPNGT 454
Query: 418 IWR 420
IWR
Sbjct: 455 IWR 457
>gi|225848506|ref|YP_002728669.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644318|gb|ACN99368.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 487
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 239/426 (56%), Gaps = 21/426 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + +S++Y +EY D + P +PRV+ H+ I I ++I+
Sbjct: 74 KIINRAKNECVPFTVISDKYIKEYFDDAEKFRIEPADIEPRVTTHIPDIIKFIQELIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+V K +YG+LS + ++ AG R+ +K++P DFALWK+AKAGEP
Sbjct: 134 YAYEVDGDVYFSVRKFKDYGKLSKRSIDELLAGARIEPGEKKKDPLDFALWKSAKAGEPY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWH EC AM +L DIHGGG+DL FPHHENEIAQ+ + Y
Sbjct: 194 WESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENEIAQAESLTGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT N +KMSKSLGN+ T+++I +Y P LR ++S HYRSPL++S +++
Sbjct: 254 WIHNGLVTVNGQKMSKSLGNYVTLKEIYSKYEPDILRLLVLSVHYRSPLDFSWDKMEETK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A + +Q+ E+ Q+ I K + F++ MSDD NT L
Sbjct: 314 KAYERLKNAIQEYEI----LQKLPTDENFEEDLYTEIQKAQSGFYSAMSDDFNTPEALAS 369
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEVKEVLR-ILGL---LPPGAY 355
F + +N+LK K KQ +S ++S ++ + + + R I GL L P
Sbjct: 370 LFG-----LVRQMNILKDKAIKQGGISKKALQSYKEAADTLHNICRDIFGLFDSLQPCVK 424
Query: 356 SEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+E + K K+ E +ED++ LIE R ARK K FS +D IR L KGI + D
Sbjct: 425 TEEI-----KVEKQEEKLDEDLINILIEVRDKARKEKQFSIADTIRDKLAEKGIVIEDTP 479
Query: 415 KETIWR 420
T W+
Sbjct: 480 FGTKWK 485
>gi|334705447|ref|ZP_08521313.1| cysteinyl-tRNA synthetase [Aeromonas caviae Ae398]
Length = 458
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 234/422 (55%), Gaps = 41/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + L+ R + D L + P +PR + H+ +I ++ ++
Sbjct: 73 KIIKRAAETHVTCDDLTERLIGDMHQDFDALGMVRPDIEPRATQHIGEIIALVETLLEKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE +YG+LSGQ LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D +A + + + AR A M DD NT +
Sbjct: 313 RAALERMYTALRDLPLAAAAGGDE-QVARFKEA---------------MDDDFNTPEAYS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K + +++ L ++E+ +LG +LQ
Sbjct: 357 ALF-DLVREIN---------RQKAEDMAVAAGLGA---RLRELGAVLG---------ILQ 394
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + LK E EE ++ +LI ER AR +K+++ +D R LT GI L D +T
Sbjct: 395 QDPEAFLKGDEADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLEDSAGKTS 454
Query: 419 WR 420
WR
Sbjct: 455 WR 456
>gi|423578497|ref|ZP_17554608.1| cysteinyl-tRNA synthetase [Bacillus cereus VD014]
gi|401221222|gb|EJR27846.1| cysteinyl-tRNA synthetase [Bacillus cereus VD014]
Length = 465
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N I K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEIEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + + L D + T
Sbjct: 409 -------ELSKEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKERNVILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|375310827|ref|ZP_09776092.1| translation initiation factor if-1 [Paenibacillus sp. Aloe-11]
gi|375077195|gb|EHS55438.1| translation initiation factor if-1 [Paenibacillus sp. Aloe-11]
Length = 467
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/419 (37%), Positives = 241/419 (57%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+A +L +++ ++ Y D+ L + PRV++ ME I D I ++++
Sbjct: 74 KLIRKARELDMEVPAVAEKFIAAYHEDLTGLNVPAASINPRVTESMELIVDFIKELVDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDVF+ +K +YG+LSGQ LE + G R+ VD RK N DF LWKAAK GE
Sbjct: 134 YAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRIHVDERKENAEDFVLWKAAKPGEIY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ HYL DIHGGG DL FPHHE E AQS A Y
Sbjct: 194 WSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPHHECECAQSEAITGKPLARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGN ++ + R+ P ALR+F++S HYR+PLNY+ + A
Sbjct: 254 WMHNGYIRIDNEKMSKSLGNGILVKDLRARHKPEALRYFMLSTHYRNPLNYNQETMSQAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++V I + + + L+ + + ++ + ++ + +F +M DD NT +T
Sbjct: 314 NSVERIANAVANVKHRLANALKGNE--EVSAGLQTKLDGILQQFGEKMDDDFNTPDAITA 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ +++ + ++L++ Q +L +++ + + +VLRI YSE
Sbjct: 372 VFE----WVSEANHLLQRDVVNQAEL---QAVLHTFDSMNKVLRI--------YSE---- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ EL ++++ QLI ER ARK K++ ++D+IR L KGI L D + WR
Sbjct: 413 ------PKEELLDDEIEQLIAERVEARKTKNWGRADEIRDLLAAKGIVLEDTAQGMRWR 465
>gi|229067855|ref|ZP_04201172.1| Cysteinyl-tRNA synthetase [Bacillus cereus F65185]
gi|229188375|ref|ZP_04315423.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10876]
gi|228595049|gb|EEK52820.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10876]
gi|228715214|gb|EEL67073.1| Cysteinyl-tRNA synthetase [Bacillus cereus F65185]
Length = 440
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 49 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 108
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 109 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 168
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 169 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 228
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 229 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 288
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H N I K + F M+DD NT++
Sbjct: 289 NGLERIKTAYGNLKHRMESSTDLTDH------NEKWLAEIEKFQTAFEEAMNDDFNTANA 342
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 343 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 383
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 384 -------ELSKEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILEDTAQGTR 436
Query: 419 WR 420
W+
Sbjct: 437 WK 438
>gi|410690165|ref|YP_006963884.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
gi|389597466|gb|AFK90217.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
Length = 463
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 231/424 (54%), Gaps = 40/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ ++L +R E D L L P +PR + H+ +I ++ +I
Sbjct: 73 KIIKRANENGESFVALVDRMITEMHKDFDALNILRPELEPRATHHISEIINITETLIRRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPADFALWKAAKAG 118
AY+ E GDV F+V P+YG+LS Q LE ++G+RV D KRN DF LWK +K G
Sbjct: 133 HAYIAENGDVMFSVSTDPDYGKLSRQDLEQLQSGDRVRTDVVDVKRNSMDFVLWKMSKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQS A
Sbjct: 193 EPSWPSPWGEGRPGWHIECSAMNCKHLGHHFDIHGGGSDLMFPHHENEIAQSTCAHDGEY 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS LNYS L
Sbjct: 253 VNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQLNYSEENLK 312
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ +Y +L+ + +++P AR A M DD NT
Sbjct: 313 QARSALERLYTSLRGTDKSVAPAGGEAFEARFIEA---------------MDDDFNTPEA 357
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYS 356
+ F A +N LK + + LRK+ +LGLL P A+
Sbjct: 358 YSVLFDMA-----REVNRLKSVDMAEAN-GMASHLRKLSG-------VLGLLEQEPEAFL 404
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ + D + EL LI++R ARK K++S +D R L GI L D +
Sbjct: 405 QSGVKTGDAEVAEIEL-------LIQQRLDARKAKNWSAADSARDRLNEMGIVLEDGPQG 457
Query: 417 TIWR 420
T WR
Sbjct: 458 TTWR 461
>gi|182420105|ref|ZP_02951339.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237666779|ref|ZP_04526764.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376142|gb|EDT73729.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237657978|gb|EEP55533.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 466
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 244/419 (58%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I +AN G L +++ EY D LQ T PR +++++++ + + +I+
Sbjct: 72 KMINKANAEGITVKELGDKFIDEYYQDADGLQVKRATINPRATEYIDEVVEFVKDLIDRG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K YG+L GQ LE+ ++G R++VD RK++P DFA+WK+ K GEP+
Sbjct: 132 FAYEIDGDVYFSTKKFEEYGKLCGQNLEDLQSGARISVDERKKDPMDFAVWKSQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIHGGG+DL FPHHENEIAQS A +Y
Sbjct: 192 WESPWGLGRPGWHIECSCMAKKLLGDTIDIHGGGMDLKFPHHENEIAQSEAVTGQKFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH V +N+KMSKS NF T R+ ++Y+ +R ++S HYR+ +N+S LDSA
Sbjct: 252 WMHAAFVNVDNKKMSKSENNFVTAREALKKYNSDVIRFLMLSGHYRTQINFSAELLDSAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+V +Y + + E ++ + A ++K R++F +M DD NT+ ++
Sbjct: 312 SSVERLYNCVNNLENLINEVNRK-EANDSEKAYLKSLDKHREKFIEKMDDDFNTADGISV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K IN+++++ + + L+LI L G+ +LQ+
Sbjct: 371 IF-DLIKDINNNVSIDSSSELCEGTLNLIREL-------------------GSPLGILQK 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
++K+L E ++ +LI++R ARKN+DF+ +D+IR DL + I L D + W+
Sbjct: 411 TEEKSL------EVEIQELIDKRQEARKNRDFALADKIRDDLKARNIILEDTPQGVRWK 463
>gi|392551107|ref|ZP_10298244.1| cysteinyl-tRNA ligase [Pseudoalteromonas spongiae UST010723-006]
Length = 458
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 233/423 (55%), Gaps = 43/423 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE +L+ R + D L LP +P V+ HM++I +MI ++I+
Sbjct: 73 KIIKRANENGEAIDALTVRMTKAMHEDFDALNMLPADIEPTVTGHMDEIIEMIERLIDKK 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V YG LS Q L+ +AG RV V K +P DF LWK AK EP
Sbjct: 133 HAYVASNGDVLFDVSTFEQYGSLSQQDLDMLQAGARVDVAEGKDDPLDFVLWKKAKVDEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS +L + FDIHGGG DL FPHHENEIAQSC A + V+
Sbjct: 193 SWSSPWGEGRPGWHIECSAMSNKHLGAHFDIHGGGSDLQFPHHENEIAQSCCATGEKYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
W+H G V N EKMSKSLGNFFT+R + + Y ++R FLI+ HYRS LNYS L+ A
Sbjct: 253 TWIHTGMVQVNKEKMSKSLGNFFTLRDVLKEYDRESVRFFLINGHYRSQLNYSTENLEQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ IY L+ EV + E+ AR N A M+DD NT L
Sbjct: 313 RAAMERIYTALRGVEVVETSL-ENDYVARFNTA---------------MNDDFNTPEALP 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ + +N LK + Q QL+ I +K + ILG +
Sbjct: 357 VIFE-----LAKEINRLKDEDANQAGQLAFI---------LKTLGEILG---------IA 393
Query: 360 QQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
QQ + L+ + +E ++ LI +R AR +K+++ +D+ R LT G+ L D +T
Sbjct: 394 QQDPESFLQGEQADDEVAEIEALILQRNQARADKNWALADEARDKLTALGVVLEDSAGKT 453
Query: 418 IWR 420
WR
Sbjct: 454 TWR 456
>gi|225851008|ref|YP_002731242.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
gi|254781689|sp|C0QRE6.1|SYC_PERMH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|225645417|gb|ACO03603.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
Length = 487
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/425 (38%), Positives = 235/425 (55%), Gaps = 19/425 (4%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + +++RY +EY D + + P +PRV+ H+ I D I ++I+
Sbjct: 74 KIINRAKNECLPFTVIADRYIKEYFQDAENFRIEPADVEPRVTTHIPDIIDFIQRLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY VEGDV+F+V K YG+LS + ++ AG RV +KR+P DFALWKA+KAGEP+
Sbjct: 134 YAYEVEGDVYFSVRKFKEYGKLSKRSVDELIAGARVEPGEKKRDPLDFALWKASKAGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWH EC AM +L DIHGGG+DL FPHHENE+AQ+ A Y
Sbjct: 194 WDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPHHENELAQAEALSDKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG VT N +KMSKSLGN+ T+++I +Y P LR ++S HYRSPL++S +++
Sbjct: 254 WIHNGLVTVNGQKMSKSLGNYITLKEIYSKYDPDVLRLLVLSVHYRSPLDFSWEKMEETK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A Y+ L+ ++ + + D I K F+A MSDD NT L
Sbjct: 314 KA----YERLKGAIDEYEILKKLPENPDFDEHLYDEIAKAEQGFYAAMSDDFNTPEALAS 369
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLS--LIESLRKIENEV----KEVLRILGLLPPGAY 355
F + +N+L+ K K +S +ES ++ + + KE+ + L P
Sbjct: 370 LFT-----LVREMNILRDKAVKSGGISKKALESYKEASDVLHSIGKEIFGLFDSLQPCIE 424
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
E ++ K + +L E LIE R ARK K F +D IR L++ GI + D
Sbjct: 425 VEEIKVEKAEEKIDTQLVE----ALIEVRNKARKEKQFEIADYIREKLSQLGIVIEDTPV 480
Query: 416 ETIWR 420
T W+
Sbjct: 481 GTKWK 485
>gi|365175135|ref|ZP_09362573.1| cysteine-tRNA ligase [Synergistes sp. 3_1_syn1]
gi|363614000|gb|EHL65505.1| cysteine-tRNA ligase [Synergistes sp. 3_1_syn1]
Length = 468
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 239/420 (56%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L+ R+ EY D L T PR + + I ++I +I
Sbjct: 74 KMIKRANEDGITVAELAERFIAEYYKDADALGIRRATVNPRATHEIAAIIEIIEALIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F+V YG+LS Q ++ +G R+ VD RK+ P DFALWK+AK GEP+
Sbjct: 134 HAYEVDGDVYFSVASFSEYGKLSKQSVDELLSGARIDVDERKQQPLDFALWKSAKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAMS YL DIHGGG DLIFPHHENEIAQS A V Y
Sbjct: 194 WDSPWGPGRPGWHIECSAMSTKYLGKTIDIHGGGSDLIFPHHENEIAQSECANNAQFVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HN ++ + EKMSKSLGNF T+R ++++ +PL LR FL S HYRSPLN+S L+ A
Sbjct: 254 WLHNAYLLIDKEKMSKSLGNFLTVRDVSQKVNPLVLRFFLASVHYRSPLNFSPEGLEQAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ + L +C + E+ + A + + F A M DD NT+ + G
Sbjct: 314 AAL----ERLNNCYADMLFALENRAAGEADEALRAAVKGSEEGFTAAMDDDFNTAGAV-G 368
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESL-RKIENEVKEVLRILGLLPPGAYSEVLQ 360
+ ++ +N +++ + ++ ++ L+ ++L K +N ILG L Y E
Sbjct: 369 CIFEMVRAVN--VHLTEHQEIDKEALTEAKALFEKTDN-------ILGYL----YEE--- 412
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
K A E ++ L+ ER ARK K+F +SD+IR L KG+ + D + W+
Sbjct: 413 -------KEAGDEESEIDALVAERTEARKAKNFKRSDEIRDLLAAKGVVIEDTPQGPRWK 465
>gi|350566003|ref|ZP_08934716.1| cysteine--tRNA ligase [Peptoniphilus indolicus ATCC 29427]
gi|348663210|gb|EGY79810.1| cysteine--tRNA ligase [Peptoniphilus indolicus ATCC 29427]
Length = 464
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 238/423 (56%), Gaps = 36/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP-PTYQPRVSDHMEQIKDMITQIINN 60
++I +AN ++ R+ +E+ D L T PR ++H+++I D I ++
Sbjct: 72 KLINKANQEDTTVKEVAERFIKEFKTDANGLHLYDYNTMNPRATEHIQEIIDFIAGLVEK 131
Query: 61 DCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV+F VE YG+LS ++LE+ +G RV + S K NPADFALWK K GEP
Sbjct: 132 GAAYESDGDVYFKVESFTEYGKLSHKKLEDLISGARVDISSLKENPADFALWKKKKEGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPW GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS + +
Sbjct: 192 YWESPWSEGRPGWHIECSVMAKSLLGDTIDIHSGGEDLQFPHHENEIAQSETLNEKPFAN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG +T +NEKMSKS GNFFT+R++ E + LR FL+S+HYRSP+N+S +
Sbjct: 252 YWLHNGMITVDNEKMSKSKGNFFTVREVAEEFDLEVLRFFLLSSHYRSPINFSRDVMVQT 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---FHARMSDDLNTSH 297
+++ IY L E K ++ + +N + +E F M +D+NT+
Sbjct: 312 KNSLERIYNGRD----KLVDLLEVTKEVELSDKDREFLNSIEEEVKFFETSMENDINTAD 367
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+T F + +K IN+ LN + K+ S ++L K+ ++LG+L E
Sbjct: 368 AITAVF-NIVKKINTGLN---ENSNKKIVSSTFDTLLKL-------TKVLGIL------E 410
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ Q+ T+ +V +LIEER ARKNKDF+++D+IR +L G+ + D T
Sbjct: 411 MSQE-----------TDIEVERLIEERVQARKNKDFNRADEIRQELLDMGVVIEDTRAGT 459
Query: 418 IWR 420
W+
Sbjct: 460 KWK 462
>gi|154502843|ref|ZP_02039903.1| hypothetical protein RUMGNA_00658 [Ruminococcus gnavus ATCC 29149]
gi|336431208|ref|ZP_08611062.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153796726|gb|EDN79146.1| cysteine--tRNA ligase [Ruminococcus gnavus ATCC 29149]
gi|336020130|gb|EGN49847.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 468
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/425 (38%), Positives = 234/425 (55%), Gaps = 36/425 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G +S RY +E DM + P T P ++ + + DMI +I+
Sbjct: 72 KIIKKANEEGVTAEEISKRYIEECKKDMEGMNVKPATKNPLATEEIGGMIDMIQTLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY G V++ K YG+LS + L++ ++G R V + K + DF LWK K G
Sbjct: 132 YAYEKNGTVYYRTRKFEGYGKLSHKNLDDLQSGGRSLLVTGEDEKEDSLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W+SPW GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQS AA
Sbjct: 192 EPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLIFPHHENEIAQSEAANGKDF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YW+HNG + +N KMSKSLGNFFT+R+I E+Y LR F++SAHYRSPLN+S ++
Sbjct: 252 SKYWLHNGFLNIDNRKMSKSLGNFFTVREIGEKYDLQVLRFFMLSAHYRSPLNFSAELME 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFHARMSDDLNT 295
+A + + I + + L E KT + + I K ++ +F M DD NT
Sbjct: 312 AAKNGLERIVTAAEHLKFLL----EGAKTENMTEKEQAKIVKSQEFTRKFEKAMDDDFNT 367
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ + F D +KFIN++ + K+ Q LS + +L +LG++
Sbjct: 368 ADAIAAVF-DLVKFINTNTDGESSKEYLQNLLSQLVALTD----------VLGIIVE--- 413
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
K E+ +D+ LI ER AARK ++F+++D+IR +L KGI L D +
Sbjct: 414 ------------KEQEMLADDIEALIAERQAARKERNFARADEIRDELLAKGIILEDTRE 461
Query: 416 ETIWR 420
W+
Sbjct: 462 GVKWK 466
>gi|240949657|ref|ZP_04753992.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295915|gb|EER46591.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 459
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 230/421 (54%), Gaps = 38/421 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D L L P +PR + H+ +I M+ ++I N
Sbjct: 73 KIIKRALENKETCDQLVDRMIAEMHKDFDALNILRPDVEPRATKHIPEIVAMVEKLIANG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV F VE YG LS Q LE +AG RV + S K+NP DF LWK +K EP
Sbjct: 133 HAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS L+YSV LD A
Sbjct: 253 YWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSLLDYSVENLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ C+V+ A + + F M DD NT L
Sbjct: 313 RSALERLYTALRGCDVS---------------GAAEGGEHYVEAFKTAMDDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKK-QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ I LN LK + K L++ +KE+ +LGLL E
Sbjct: 358 VLFE-----IARELNKLKTEDMAKANGLAV---------RLKELAGVLGLLEQD--PESF 401
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q + + AE+ LI++R A+ NK+++ +D++R L I L D TIW
Sbjct: 402 LQGDTNSDEAAEIE-----ALIKQRNEAKANKNWAVADEVRDKLKAMNIVLEDTPNGTIW 456
Query: 420 R 420
R
Sbjct: 457 R 457
>gi|401679837|ref|ZP_10811761.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
gi|400218964|gb|EJO49835.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
Length = 482
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/433 (39%), Positives = 241/433 (55%), Gaps = 43/433 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +N G ++NRY Y M L PRVS H+ I MI+ +I+
Sbjct: 75 KIINTSNGEGVAWDVIANRYIDSYFEVMDALGVERADVYPRVSTHIPDILKMISTLIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD RK+NP DFALWKAAK GEP
Sbjct: 135 FAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPF 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSNV 179
W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIFPHHENEIAQS C+ S V
Sbjct: 195 WESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIFPHHENEIAQSEGCSGHHPS-V 253
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR+FL+S HYRSPL++S +L+
Sbjct: 254 KYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHYRSPLDFSDERLEE 313
Query: 240 ASDAVFYIYQT------LQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDL 293
A+ ++ + L+ CE P + R+ A++ +EF MSDD
Sbjct: 314 ANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLEKAKE----YEEEFEVAMSDDF 364
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP-- 351
NT+ + F + +N+ + ++ + E++ +++ K + ++G+L
Sbjct: 365 NTALATSSMFG-----LAKEINIYYQAVTGREGVVCQEAIAEVKRIFKFMTEVIGVLEKA 419
Query: 352 ----PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 407
GA + +QL D L R A R+ K ++ +D IR L G
Sbjct: 420 WEGNTGADAVEYEQLMDVILSV--------------RQACREQKQWALADCIRDRLAEIG 465
Query: 408 IALMDMGKETIWR 420
I + D W+
Sbjct: 466 ITIEDSPTGARWK 478
>gi|397904926|ref|ZP_10505801.1| Cysteinyl-tRNA synthetase [Caloramator australicus RC3]
gi|397162020|emb|CCJ33135.1| Cysteinyl-tRNA synthetase [Caloramator australicus RC3]
Length = 467
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 232/419 (55%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IRRAN+ G ++ +Y +EY D L+ T PR ++ + +I + +++
Sbjct: 74 KLIRRANEEGTTVKEVAEKYIKEYYKDADGLKIKRATVNPRATEFIGEIIAFVKDLVDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F K YG+LS Q +E+ AG R+ +D RKRNP DFALWKA K GEP+
Sbjct: 134 YAYVVDGDVYFDTTKFKEYGKLSHQSIEDLEAGARIEIDERKRNPMDFALWKAKKEGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIHGGG DLIFPHHENEIAQS A +Y
Sbjct: 194 WESPWGEGRPGWHIECSTMACSLLGETIDIHGGGADLIFPHHENEIAQSEARNGKPFANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH ++ NN+KMSKSL NFFT R+I E+Y +R F++S HYR+P+N+S+ LD A
Sbjct: 254 WMHVAYLNVNNQKMSKSLNNFFTAREILEKYDAEVVRLFMLSGHYRNPINFSIELLDQAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
A+ +Y + + E + ++ TA + ++ R+ + M DD NT+ ++
Sbjct: 314 AALERLYNAIANLEHVIETSEDRELTAE-ELEFFNRLDSFRERYIEVMDDDFNTADGISV 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D ++ +N+++ K+ Q+ L LI L G+ +L++
Sbjct: 373 IF-DLVREVNTNIKEGSPKKLAQKALDLIREL-------------------GSPLGILEK 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+L + Q ARK K+++ +D+IR L GI L D + W+
Sbjct: 413 STKGSLDEEIERLIEERQ------KARKEKNYALADKIRDQLKEMGIILEDTPQGVRWK 465
>gi|417840824|ref|ZP_12486932.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
gi|341950635|gb|EGT77222.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
Length = 459
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 234/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++A YRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAQYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVAF-----------GGENFVEAFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + +E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTED--------VEKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD+S +D R +LT GI L D T
Sbjct: 396 QEPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWSAADAARNELTVMGIVLEDGPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|386265553|ref|YP_005829045.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
gi|309972789|gb|ADO95990.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
Length = 459
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 234/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + F M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVVF-----------GGEN----FAETFREAMDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + +E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTED--------VEKANGLAVRLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD++ +D R +LT GI L D T
Sbjct: 396 QDPEKFLQAGSNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLEDGPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|410690076|ref|YP_006963796.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
gi|389597196|gb|AFK89949.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
Length = 463
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 230/424 (54%), Gaps = 40/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ ++L +R E D L L P +PR + H+ +I ++ +I
Sbjct: 73 KIIKRANENGESFVALVDRMITEMHKDFDALNILRPELEPRATHHISEIINITETLIRRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD--SRKRNPADFALWKAAKAG 118
AY+ E GDV F+V P YG+LS Q LE ++G+RV D KRN DF LWK +K G
Sbjct: 133 HAYIAENGDVMFSVSTDPGYGKLSRQDLEQLQSGDRVRTDVVDVKRNSMDFVLWKMSKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EPSW SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQS A
Sbjct: 193 EPSWPSPWGEGRPGWHIECSAMNCKHLGHHFDIHGGGSDLMFPHHENEIAQSTCAHDGEY 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
V+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS LNYS L
Sbjct: 253 VNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLMSGHYRSQLNYSEENLK 312
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A A+ +Y +L+ + +++P AR A M DD NT
Sbjct: 313 QARSALERLYTSLRGTDKSVAPAGGEAFEARFIEA---------------MDDDFNTPEA 357
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYS 356
+ F A +N LK + + LRK+ +LGLL P A+
Sbjct: 358 YSVLFDMA-----REVNRLKSVDMAEAN-GMASHLRKLSG-------VLGLLEQEPEAFL 404
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ + D + EL LI++R ARK K++S +D R L GI L D +
Sbjct: 405 QSGVKTGDAEVAEIEL-------LIQQRLDARKAKNWSAADSARDRLNEMGIVLEDGPQG 457
Query: 417 TIWR 420
T WR
Sbjct: 458 TTWR 461
>gi|399910862|ref|ZP_10779176.1| cysteinyl-tRNA synthetase [Halomonas sp. KM-1]
Length = 476
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 227/423 (53%), Gaps = 30/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA++ GE SL+ R D A L L P +PR + H+ +I M+ +I+
Sbjct: 72 KILKRADENGETIASLTERMIAAMHEDEARLGVLRPDREPRATGHVSEIIAMVETLIDKG 131
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
Y GDV++ V K YG+L+ + L+ RAG RV VD K +P DF LWKAAK GE
Sbjct: 132 YGYPAANGDVYYRVRKFEGYGKLNNRNLDEMRAGARVDVDEHKEDPLDFVLWKAAKPGEA 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA V+
Sbjct: 192 SWPSPWGEGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQSEAATGKPYVN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V N EKMSKSLGNFFTIR++ E + P +R+ L+++HYRSP+NY+ L A
Sbjct: 252 TWMHAGAVRVNQEKMSKSLGNFFTIREVLEVHDPEVVRYLLVASHYRSPINYAPESLADA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ Y L V ++ + A+ D F M DD NT+ L+
Sbjct: 312 RKSLERFYNALDGVGVG---GKDEKTIQKERALAKAVYGDFEDRFIVAMDDDFNTAEALS 368
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + LN KK+ K + +E+K + +LGL LQ
Sbjct: 369 VLFD-----LARELNRAKKEATKLAP--------GLAHELKRLGGVLGL---------LQ 406
Query: 361 QLKDKALKRAE----LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
Q + LK L+E ++ I RA A+K +DF+ +D IR +L GI L D +
Sbjct: 407 QQPEAFLKGGAGELPLSESEIEAKIVARAEAKKARDFAAADGIRDELATLGIVLKDSREG 466
Query: 417 TIW 419
T W
Sbjct: 467 TSW 469
>gi|90407713|ref|ZP_01215892.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
gi|90311182|gb|EAS39288.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
Length = 460
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 178/421 (42%), Positives = 237/421 (56%), Gaps = 37/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ E+ +L+ R+ + D L L P +PRV++HM + MI +I
Sbjct: 73 KIIKRANENNESCDALTARFTKAMHRDFDALNILRPDLEPRVTEHMPDVIAMIKTLIEKQ 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V YG+LSGQ L+ +AG RV V+ K +P DF LWK +K EP
Sbjct: 133 HAYVASNGDVLFSVSSFDGYGKLSGQNLDMLQAGARVDVEESKHDPLDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAMS +L FDIHGGG DL FPHHENEIAQSC A + +
Sbjct: 193 SWESPWGAGRPGWHIECSAMSFKHLGPIFDIHGGGSDLTFPHHENEIAQSCCAHDATYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + KMSKSL NFFTI+ + E Y ++R+FLIS HYRS LNYS L A
Sbjct: 253 TWMHSGMVQVDKVKMSKSLNNFFTIKDVLEAYDAESVRYFLISGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+D +++ +P A+D N F M DD NT L
Sbjct: 313 RASLERLYTALRDVDISDAPI------------AKD--NSHYQAFCKAMDDDFNTPEALA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A K +N + K P +L+L+ LR + N +LGLL A + LQ
Sbjct: 359 VLFELA-KALNKAKLSADKSAP---ELALL--LRTLGN-------VLGLLDQSA-DDFLQ 404
Query: 361 QLKDKA-LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ A +++ EL LI++R AR NKD++ +D RA L+ I L D T W
Sbjct: 405 GDESSAEVEKIEL-------LIKQRNDARANKDWASADDARAQLSALNIVLEDGANGTTW 457
Query: 420 R 420
R
Sbjct: 458 R 458
>gi|55820186|ref|YP_138628.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
gi|55822074|ref|YP_140515.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
gi|61216120|sp|Q5M1W6.1|SYC_STRT1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216121|sp|Q5M6F6.1|SYC_STRT2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|55736171|gb|AAV59813.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
gi|55738059|gb|AAV61700.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
Length = 447
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 229/421 (54%), Gaps = 52/421 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN++G + LS+++ ++ D A L P T PRV ++M++I ++ +I+
Sbjct: 73 KIIKAANEVGISTKELSDKFITAFMEDTAQLGIKPATQNPRVINYMDEIIAFVSILIDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK +P DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDAETDRKEDPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SW+SPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + D EV L + ++ + D F A M DD NT++
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQAYLDAFQAAMDDDFNTANG 358
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K+INS +++ +++L++ G+ V
Sbjct: 359 VTVLF-DMAKWINSG-----------------NYDETVKDAFEKILQVFGI--------V 392
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ E +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 393 FEE---------ETLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVR 443
Query: 419 W 419
W
Sbjct: 444 W 444
>gi|150402240|ref|YP_001329534.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
gi|166200151|sp|A6VG07.1|SYC_METM7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150033270|gb|ABR65383.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
Length = 476
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 235/421 (55%), Gaps = 23/421 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+ + G+NP LS + +L DMA L+ P P+V++H+ +I I ++I
Sbjct: 73 KIIKRSQEKGKNPKELSETFVNVFLNDMATLKVKPADIYPKVTEHIPEIIAFIEKLIEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY E V+F V+K NYG+LS LE+ +G R+ K+NP DFALWK AK GEP
Sbjct: 133 FAYKTENGVYFEVKKFENYGKLSNINLEDLISGARIEPSDEKKNPEDFALWKTAKPGEPK 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SP+G GRPGWHIECSAMS+ YL +FDIHGGG DL FPHHENEIAQS A V+Y
Sbjct: 193 WESPFGEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIAQSVAYSGKDWVNY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V N EKMSKSLGNF TI I++ Y P LR F I HYRSP++Y+ +
Sbjct: 253 WLHTGFVMVNGEKMSKSLGNFITIEDISKEYDPEILRFFFIQRHYRSPIDYTAESMSHVK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + IY +++ ++L ++ G D + + F+ M+ D NT L
Sbjct: 313 NNLEKIYNVIENIRISLEKSEKSGIWNENEFLLYDILKNSKHNFYEAMNSDFNTVEALKS 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ + +N L+++ K P + L L+ + +I+G E+
Sbjct: 373 VFEVS-NGVNKYLSLV--KTPSEGLL-----LKAF-----DFFKIVG--------EIFGL 411
Query: 362 LKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE-TIW 419
++ + +E +E ++ LIE R+ R K++ SD+IR L G + D KE T++
Sbjct: 412 FENYFKESSESNDEGFVKFLIELRSDLRLQKNYEMSDKIRDGLKELGYQIEDNPKEGTVF 471
Query: 420 R 420
+
Sbjct: 472 K 472
>gi|170717373|ref|YP_001783468.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
gi|189082066|sp|B0UVH6.1|SYC_HAES2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|168825502|gb|ACA30873.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
Length = 459
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 235/420 (55%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E L +R E D L L P ++PR + H+ +I ++ ++I
Sbjct: 73 KIIRRALENKETCEQLVDRMVVEMYKDFDALNVLRPDFEPRATHHIAEIIALVEKLIARG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q L +AG RV + K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQSC A + V+
Sbjct: 193 SWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGADLMFPHHENEIAQSCCAHGNRYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS LNYS LD A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQLNYSEENLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F A+ A M+DD NT + ++
Sbjct: 313 HGALERLYTALRGTDKSAVSFGGENFIAQFTEA---------------MNDDFNTPNAIS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N L K + K L LR E+ ILGLL + LQ
Sbjct: 358 VLFEMA-----REINRL-KNEDKLLADGLAARLR-------ELASILGLLDQDP-EDFLQ 403
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D AE+ + + +LI++R AR+ KD++++D R +LT G+ L D T+WR
Sbjct: 404 AGSDD----AEIAK--IEELIKQRNDARQAKDWARADAARNELTTMGVILEDSSNGTMWR 457
>gi|168178810|ref|ZP_02613474.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
gi|182669931|gb|EDT81907.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
Length = 465
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 242/420 (57%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L +R+ +EY D DL T PR ++ ME+I ++ +I
Sbjct: 72 KMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEIIKFVSDLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA+WK+ K GEP+
Sbjct: 132 YAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFAIWKSQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQSEARTGKQFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +N+S+ LDS
Sbjct: 252 WLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQINFSMELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++ + E L + E + + E + K ++++ +M DD NT+ ++
Sbjct: 312 AALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKMDDDFNTADAIS 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N+++ + K+ + L LI +E+ LG+L + + +
Sbjct: 370 VIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGSPLGILQESTKASLEE 418
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+++ +R + ARK K+++ +D+IR +L +GI L D + W+
Sbjct: 419 EIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIVLEDTTQGVRWK 463
>gi|350264194|ref|YP_004875501.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349597081|gb|AEP84869.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 466
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 228/424 (53%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+ I + + Q++
Sbjct: 74 KLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMDAIIEFVDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
A + A S Q H + N +D + + R F M DD NT+
Sbjct: 314 SA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWLEKVEEHRKAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L+K ++ + ++ +LG
Sbjct: 366 NAISVLF-DLAKHANY---YLQKDHTADHVITAFIGM------FDRIVSVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|385809061|ref|YP_005845457.1| cysteinyl-tRNA synthetase [Ignavibacterium album JCM 16511]
gi|383801109|gb|AFH48189.1| Cysteinyl-tRNA synthetase [Ignavibacterium album JCM 16511]
Length = 469
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/426 (39%), Positives = 245/426 (57%), Gaps = 36/426 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G++ ++ Y +E+ D+ L+ P TY PR ++ M + +MI ++
Sbjct: 73 KIIKKANEEGKSAKEVAEFYIREFFTDIEKLRIKPATYYPRATEFMNDMIEMIKRLEEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+G+VF+ V K +YG+LSG++ E AG RV V+ +K++P DFALWK AK GEP
Sbjct: 133 IAYNVDGNVFYDVSKFMDYGKLSGKKTEELEAGARVEVNEQKKHPLDFALWKKAKEGEPY 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS L FDIH GG DLIFPHHENEIAQS AA + Y
Sbjct: 193 WESPWGKGRPGWHIECSAMSCKLLGESFDIHAGGHDLIFPHHENEIAQSEAANEKPFAKY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G + N EKMSKSLGNFFT R+I ++Y A+R F + AHYR PLN+S L +A
Sbjct: 253 WLHFGFLNINEEKMSKSLGNFFTAREILKKYSAEAIRLFFVQAHYRGPLNFSDELLQAAE 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTA---RINPAAEDCINKLRDEFHARMSDDLNTSHI 298
V + +Q+ L+ +E KT+ ++N E K F M DD N++
Sbjct: 313 KGV----EKIQNLADKLN--EELNKTSEGKKVNFNFEQWYKK----FEEAMDDDFNSAQA 362
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES-LRKIENEVKEVLRILGLLPPGAYSE 357
T D + +N + + + P +Q L+ +S L+K +EV V+ E
Sbjct: 363 -TAVLFDFTREVNRLI--AESENPDKQFLTEAKSFLKKTADEVLGVVNF-------EKKE 412
Query: 358 VLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
L L E D+++ LI+ R A++NK+++ SD+IR +L G+ L D +
Sbjct: 413 DLPSL-----------ENDLIELLIKIRTEAKQNKNYALSDKIRDELKNLGVILQDTKEG 461
Query: 417 TIWRPC 422
T ++
Sbjct: 462 TSFKKV 467
>gi|225574357|ref|ZP_03782967.1| hypothetical protein RUMHYD_02424 [Blautia hydrogenotrophica DSM
10507]
gi|225038413|gb|EEG48659.1| cysteine--tRNA ligase [Blautia hydrogenotrophica DSM 10507]
Length = 484
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 164/427 (38%), Positives = 241/427 (56%), Gaps = 38/427 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN+ G +S RY +E DM + P T P ++ +E + +MI +I+
Sbjct: 86 KIIAKANEEGVTADEISKRYIEECKKDMEGMNVRPATTHPLATEEIEGMVEMIQTLIDKG 145
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKA 117
AY V +G V+F V+K YG+LS + L++ ++G R V+ + +K +P DF LWK K
Sbjct: 146 FAYPVADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRALQVSGEEQKEDPLDFVLWKPRKE 205
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP+W SPW GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQS
Sbjct: 206 GEPAWPSPWCEGRPGWHIECSVMSKKYLGEEIDIHAGGEDLIFPHHENEIAQSECCNGKV 265
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
YWMHNG + +N+KMSKSLGNFFT+R+I E+Y LR F+++AHYRSPLN+S +
Sbjct: 266 FARYWMHNGFLNIDNKKMSKSLGNFFTVREIAEQYDLQVLRFFMLNAHYRSPLNFSRDLM 325
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR----DEFHARMSDDL 293
+++ +++ I + L + K I+P ++ +N+ + +F M DD
Sbjct: 326 EASKNSLERILNGAE----RLRFLADGAKKIEISPQEQESLNEAKKIYVSKFEEAMDDDF 381
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPG 353
NT+ L F+ +KF N+ +N K + +++ K++ +LGL+
Sbjct: 382 NTADALAAVFE-LVKFANTQINEESSKGYVVEVYAIL----------KQLCDVLGLIIE- 429
Query: 354 AYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
K E+ +ED+ +LI ER AARK K+F+K+D+IR LT GI L D
Sbjct: 430 --------------KEKEVLDEDIERLIAERQAARKMKNFAKADEIRDQLTNMGIILEDT 475
Query: 414 GKETIWR 420
+ W+
Sbjct: 476 REGVKWK 482
>gi|423094541|ref|ZP_17082337.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
gi|397886248|gb|EJL02731.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
Length = 460
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 227/420 (54%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE +L+ R Q D A L L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRARENGEPYDALTERMIQAMHEDEARLNILKPDLEPRATDHIPGMLSMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K +P DF LWK AK GEP
Sbjct: 133 YAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKEDPLDFVLWKGAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + ++YHP +R+ L+S+HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVSSHYRSAINYSEDNLKDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A+ P G AR F M+DD T
Sbjct: 313 KGALERFYHALKGLP-AVPPAGGEGFVAR---------------FTEVMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ S + + + +KE+ +LG+L E
Sbjct: 357 VLFE-----MVREINRLRE--------SDLNAAAGLAARLKELASVLGVLQ----LEADD 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ A R + E D LI+ R AR NKD+++SD+IR LT G+ L D T WR
Sbjct: 400 FLQAGAEGRVDAAEVDA--LIQARLTARTNKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|254252008|ref|ZP_04945326.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
gi|124894617|gb|EAY68497.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
Length = 465
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 178/427 (41%), Positives = 239/427 (55%), Gaps = 46/427 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE SL++R+ D L P +PR + + Q+ MI Q+ +N
Sbjct: 75 KIIRRAVENGETIKSLTDRFIGAMHEDEDALGIQRPDIEPRATQFIPQMLGMIEQLESNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V K NYG+LSG+ L++ RAGERVA + K +P DF LWK AK +P
Sbjct: 135 YAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDAKEDPLDFVLWKRAKPEDP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
SW+S +G GRPGWHIECSAM L FDIHGGG DL FPHHENEIAQS A +
Sbjct: 195 EGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENEIAQSEGATGQT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY +R F++ HYRSPLNYS + L
Sbjct: 255 FVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRFFIVRTHYRSPLNYSDVHL 314
Query: 238 DSASDAVFYIYQTLQDCE---VALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLN 294
D A ++ +Y L+D E +AL + H + F A M+DD N
Sbjct: 315 DDARASLTRLYTALKDVEPDALALDWSEPHAQ-----------------RFAAAMNDDFN 357
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T + F+ A + +N + + +Q KQ L R+ P A
Sbjct: 358 TPVAIATLFELAGE-VNRTRDASLARQLKQLAGLLGLLGRE----------------PRA 400
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM- 413
+ LQQ A + L +++ I R AA++ KD++++D+IRA+L GIAL D
Sbjct: 401 F---LQQASGAA-RDGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKP 456
Query: 414 GKETIWR 420
G T WR
Sbjct: 457 GGSTEWR 463
>gi|169335260|ref|ZP_02862453.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
17244]
gi|169257998|gb|EDS71964.1| cysteine--tRNA ligase [Anaerofustis stercorihominis DSM 17244]
Length = 468
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 240/422 (56%), Gaps = 33/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +A + +++++Y +EY D L T PRVS+ + I D+I+ + N
Sbjct: 72 KIINKAKEEHTTSKAVADKYIKEYFTDAKGLGIKEATVHPRVSECIGDIIDLISDLEKNG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKA-GEP 120
AY V+G+V++ V K +YG+LS + ++ +G RV V+ K +P DFALWK K E
Sbjct: 132 YAYNVDGNVYYRVSKFKDYGKLSKKPIDELISGARVEVNDEKESPLDFALWKKQKEDSEI 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
++DSPWG GRPGWHIECSAMS YL S DIHGGG DLIFPHHENEIAQS A V
Sbjct: 192 AFDSPWGKGRPGWHIECSAMSRKYLGSTIDIHGGGEDLIFPHHENEIAQSEGANGKDFVH 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
Y++HNG++ NNEKMSKS GNFF +R I++ + +R F++SAHY++P+N+S L
Sbjct: 252 YFVHNGYININNEKMSKSKGNFFMVRDISKDFDLEVVRLFMLSAHYKTPVNFSFDILKQT 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN---KLRDEFHARMSDDLNTSH 297
+ +Y T ++ L + K + ++ IN K R+EF M DD+NT++
Sbjct: 312 QSGLNRLYNTKENLLYLL----DKAKDKDLKEDEKEFINSLPKYREEFKNAMEDDINTAN 367
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
++ + D K INS++N K+ + + L +LGLL E
Sbjct: 368 AVSTIY-DLSKDINSNVNENSSKEMIMKSYEMYMELNG----------VLGLLTKEKEDE 416
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+L E+++++LIE+R ARKNKDF+ +D+IR DL KGI L D +
Sbjct: 417 IL--------------EDEIIELIEKRQNARKNKDFALADKIRDDLLDKGIVLEDTREGV 462
Query: 418 IW 419
W
Sbjct: 463 KW 464
>gi|226950955|ref|YP_002806046.1| cysteinyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto]
gi|254781234|sp|C1FMX3.1|SYC_CLOBJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226842951|gb|ACO85617.1| cysteine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
Length = 465
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 242/420 (57%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L +R+ +EY D DL T PR ++ ME+I ++ +I
Sbjct: 72 KMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEIIKFVSDLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA+WK+ K GEP+
Sbjct: 132 YAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFAIWKSQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQSEARTGKQFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +N+S+ LDS
Sbjct: 252 WLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQINFSMELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++ + E L + E + + E + K ++++ +M DD NT+ ++
Sbjct: 312 SALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKMDDDFNTADAIS 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N+++ + K+ + L LI +E+ LG+L + + +
Sbjct: 370 VIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGSPLGILQESTKASLEE 418
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+++ +R + ARK K+++ +D+IR +L +GI L D + W+
Sbjct: 419 EIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIVLEDTPQGVRWK 463
>gi|403238385|ref|ZP_10916971.1| cysteinyl-tRNA ligase [Bacillus sp. 10403023]
Length = 465
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 238/419 (56%), Gaps = 29/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ Y D++ L C PRV+++ME I D I +I+
Sbjct: 74 KLIKAANELGEDVPTIADRFINAYFEDVSALGCKKADVHPRVTENMEIIIDFIQALIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV++ + YG+LS Q ++ R G R+ V +K++ DF LWK+AK GE
Sbjct: 134 FAYESEGDVYYRTREFKEYGKLSHQSIDELRVGARIEVGDKKQDALDFVLWKSAKPGEIY 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + +Y
Sbjct: 194 WESPWGEGRPGWHIECSAMAKRYLGDTIDIHAGGQDLAFPHHENEIAQSEAVNGKTFANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I + P LR F++S HYR P+NYS+ L+S
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFVLVHDIMKDVDPQVLRFFMLSVHYRHPINYSLELLESTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+A+ + + + + L Q + A + I R++F M DD NT++ ++
Sbjct: 314 NALERLRTSYSNLKHRL---QSSTNLTNDDSAWLEKITAFRNDFIEAMDDDFNTANAISV 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ + K N L Q K +IE+ + E + + LGL +
Sbjct: 371 LFELS-KQANYYL------QEKNTSEKVIEAFLQ---EFEVLFSTLGL-----------R 409
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+D+ +L +E++ LI +R ARKN+DF+ SDQIR L I L D + T W+
Sbjct: 410 LEDE-----QLLDEEIEDLIAKRNQARKNRDFALSDQIRDQLKAMNIILEDTPQGTRWK 463
>gi|359410050|ref|ZP_09202515.1| cysteinyl-tRNA synthetase [Clostridium sp. DL-VIII]
gi|357168934|gb|EHI97108.1| cysteinyl-tRNA synthetase [Clostridium sp. DL-VIII]
Length = 466
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 234/421 (55%), Gaps = 31/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I +AND G L ++Y +EY D L+ T PR ++++ I I Q+I N
Sbjct: 72 KMINKANDEGITVKELGDKYIKEYYQDADALKIERATVNPRATEYINDIIKFIEQLIKNG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+++ +K NYG+L GQ L++ + G R++VD RKR+P DFA+WKA K GEP+
Sbjct: 132 FAYEIDGDVYYSTKKFTNYGKLGGQNLDDLQVGARISVDERKRDPMDFAVWKAKKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG+DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGLGRPGWHIECSCMAKKLLGDTIDIHAGGMDLKFPHHENEIAQSEAVTGKPFAHY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH V +N+KMSKSL NFFT R+I E Y A+R ++S HYR +N++ LDSA
Sbjct: 252 WMHAAFVNVDNKKMSKSLNNFFTAREILEEYDADAIRFLMLSGHYRIQINFTKELLDSAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSHIL 299
++ +Y + + E + E K + E ++K R+ F +M DD NT+ +
Sbjct: 312 SSIERLYNCINNLE---NLKNEVSKKTLDDKEREYLKSLDKYRENFIEKMDDDFNTADAI 368
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F ++ K S E K E ++E+ LG +L
Sbjct: 369 SVLF-----------DLAKDLNNNINISSSSELCEKAEALMRELANPLG---------IL 408
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
Q +K L E ++ +LI++R ARK++DF+ +D+IR DL + I L D + W
Sbjct: 409 QNHMEKDL------ESEIQELIDKRQQARKDRDFALADKIRDDLKSRNIVLEDTPQGVRW 462
Query: 420 R 420
+
Sbjct: 463 K 463
>gi|423197293|ref|ZP_17183876.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
gi|404630981|gb|EKB27617.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
Length = 458
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 239/423 (56%), Gaps = 43/423 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + G L+ R + D L + P +PR + H+ +I +++ +++ +
Sbjct: 73 KIIKRAAETGVTCDDLTERLIGDMHADFDALGMVRPDVEPRATQHIGEIIELVQSLLDKE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V+ +YG+LSGQ LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRNPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A+ +Y L+D E A + E + AR A M DD NT
Sbjct: 313 RAALERMYTALRDLPEAAAAGGDE--QVARFKEA---------------MDDDFNTPEAY 355
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F D ++ IN + K + +++ L ++E+ +LG +L
Sbjct: 356 SALF-DLVREIN---------RQKGEDMAVAAGLGA---RLRELGAVLG---------IL 393
Query: 360 QQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
QQ D LK E +E ++ +LI ER AR +K+++ +D RA LT GI L D +T
Sbjct: 394 QQDPDAFLKGDEADDEVAEIERLITERNQARADKNWAAADAARARLTEMGIVLEDSAGKT 453
Query: 418 IWR 420
WR
Sbjct: 454 SWR 456
>gi|359440396|ref|ZP_09230316.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|359456073|ref|ZP_09245267.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
gi|392534096|ref|ZP_10281233.1| cysteinyl-tRNA ligase [Pseudoalteromonas arctica A 37-1-2]
gi|358037709|dbj|GAA66565.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|358046880|dbj|GAA81516.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
Length = 459
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 231/423 (54%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ L+ R + D L L P +P V+ HM++I M+ ++I
Sbjct: 73 KIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEIIVMVKRLIEKG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F V YG LS Q L ++G RV V K +P DF LWK AKAGEP
Sbjct: 133 HAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVLWKKAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSCCANNGKYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
W+H G V N EKMSKSL NFFT+R++ + Y P ++R+FLIS HYRS LNYS LD A
Sbjct: 253 TWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDPESVRYFLISGHYRSQLNYSQENLDQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ IY L+D E + N+ +F M+DD NT L
Sbjct: 313 RSSLERIYTALRDVEPVECDLEG---------------NEFVAKFRKAMNDDFNTPEALP 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ + LN +K+ Q QL+ I LR I N +LG V
Sbjct: 358 VLFE-----LAKELNRVKESDAVQAGQLAFI--LRSIGN-------VLG---------VA 394
Query: 360 QQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
QQ + L+ + +E + LI +R AR +K+++ +D+ R L G+ L D +T
Sbjct: 395 QQAPEAFLQGGQDDDEVATIEALIVKRNEARASKNWAAADEARDALNALGVILEDSAGKT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|407475972|ref|YP_006789849.1| cysteinyl-tRNA synthetase [Exiguobacterium antarcticum B7]
gi|407060051|gb|AFS69241.1| cysteinyl-tRNA synthetase [Exiguobacterium antarcticum B7]
Length = 465
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 226/422 (53%), Gaps = 34/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR AN+LGE+ L+ R+ Y D L P V++ M+ I I ++
Sbjct: 73 KIIRTANELGEDYHELTKRFIDAYHADTGALNVQKADIHPLVTETMDDIIAFIEVLVEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F NYG+LS Q ++ R+G R+ V +K +P DF LWKAAK GEP+
Sbjct: 133 NAYASSGDVYFRTRSFENYGQLSQQSIDELRSGARIEVGEKKEDPLDFVLWKAAKPGEPA 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A +Y
Sbjct: 193 WTSPWGEGRPGWHIECSAMAKKYLGDTIDIHAGGQDLKFPHHENEIAQSEACNSQKFANY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + NEKMSKSLGNF T+ + + P+ LR F++S YR P+NYS +D A+
Sbjct: 253 WMHNGFLNIENEKMSKSLGNFLTVHEAIQAVDPMVLRFFMLSVQYRHPINYSRELIDQAA 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHARMSDDLNTSHI 298
+ + I +++ + E L+ TA + + E + + ++ F M DD NT++
Sbjct: 313 NGLTRIRESVANVEHRLT------MTANLGTSNEKWLKRIEAIKQHFVTSMDDDFNTANA 366
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K N L Q ++E + +E+ VL + + G
Sbjct: 367 VTDLF-DLSKEANLYLG------EDQVATEVLERFLAVFDELSTVLGVTLTVDKG----- 414
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L +E+V QLI +R ARK++DF+++D IR L +GI L D +
Sbjct: 415 -------------LLDEEVEQLIRDRDTARKDRDFARADAIRDQLRDQGILLEDTAQGMR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|399055784|ref|ZP_10743434.1| cysteinyl-tRNA synthetase [Brevibacillus sp. CF112]
gi|433543315|ref|ZP_20499725.1| cysteinyl-tRNA synthetase [Brevibacillus agri BAB-2500]
gi|398046647|gb|EJL39241.1| cysteinyl-tRNA synthetase [Brevibacillus sp. CF112]
gi|432185444|gb|ELK42935.1| cysteinyl-tRNA synthetase [Brevibacillus agri BAB-2500]
Length = 468
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 167/425 (39%), Positives = 237/425 (55%), Gaps = 38/425 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR AN G +++RY Y D+ L LPP QPRV + +I + +I
Sbjct: 74 KLIRVANQEGTTVKEVADRYTDAYNEDLRALNVLPPDIQPRVMQTIPEIISFVEGLIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F + YG+LS Q L++ +AG RV ++ +K +P DFALWK+AK GE +
Sbjct: 134 YAYESEGDVYFRTGRFQEYGKLSHQPLDDLQAGARVEINEKKEHPLDFALWKSAKEGEVT 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ +L + DIH GG DL+FPHHENEIAQS Y
Sbjct: 194 WSSPWGEGRPGWHIECSAMALKFLGEQIDIHAGGTDLVFPHHENEIAQSECFTGKVFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + +NEKMSKSLGNF R +++++ +R F++ HYR+P+N+S L+ A+
Sbjct: 254 WLHNGMLNIDNEKMSKSLGNFLLARDLSKKFGGQLIRFFMLQGHYRNPINFSEELLEQAA 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARI---NPAAED---CINKLRDEFHARMSDDLNT 295
+ L+ + A + TAR N AE+ IN+LR+ F M DDLNT
Sbjct: 314 NG-------LERIKTAYTNLSHRLDTARDEEPNGQAEEQQRIINELRERFITEMDDDLNT 366
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
++ +T F D +K N L + Q + E +R + E+ +LGL
Sbjct: 367 ANAITVIF-DVVKEANLYL--------RHQNVGAGE-VRAYMELLVELTEVLGL------ 410
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
E+ ++ EL + ++ LI ER ARK K+F++SD+IR L KGI L D +
Sbjct: 411 -EIAEE--------QELVDSEIDALIAERTEARKAKNFARSDEIRDLLAAKGIVLEDTPQ 461
Query: 416 ETIWR 420
WR
Sbjct: 462 GVRWR 466
>gi|428301159|ref|YP_007139465.1| cysteinyl-tRNA synthetase [Calothrix sp. PCC 6303]
gi|428237703|gb|AFZ03493.1| cysteinyl-tRNA synthetase [Calothrix sp. PCC 6303]
Length = 488
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 246/433 (56%), Gaps = 35/433 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+ RA + G +SNR+ EY D+ L PR ++H++ I+D+I +++ D
Sbjct: 74 KILNRAKEQGSTMEVVSNRFIDEYFTDIRRLNVTDADDYPRATEHIQDIQDLIQILVDKD 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD------SRKRNPADFALWKAA 115
AY GDV++ VEK P YG+LSG+ L + +AG V+ ++K+ P DFALWK A
Sbjct: 134 LAYSAGGDVYYRVEKFPTYGKLSGRNLSDMQAGASGRVEAETSENTKKQYPLDFALWKGA 193
Query: 116 KAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQ 175
K GEP+WDSPWG GRPGWHIECSAM L DIHGGG DL+FPHHENEIAQS A
Sbjct: 194 KPGEPAWDSPWGQGRPGWHIECSAMIRSRLGETIDIHGGGGDLVFPHHENEIAQSEGAIN 253
Query: 176 DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT----ERY----HPLALRHFLISAHYR 227
YW HNG V + +KMSKSLGNF TIR++ E+Y HP+A+R F++ AHYR
Sbjct: 254 KPLARYWTHNGMVMVDGQKMSKSLGNFITIRELLDGKWEKYPEPVHPMAVRLFVLQAHYR 313
Query: 228 SPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINPAAEDCINKLRDEFH 286
PL+++ + S+ ++ ++TLQ+ V F E G T N ++ I + F
Sbjct: 314 KPLDFTEDAIASSVNS----WKTLQEGLVFGEQFGEKLGFTEDGNQLDKNLIER----FE 365
Query: 287 ARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRI 346
+ DD N S L F+ A + ++ + + K L ++ + + ++
Sbjct: 366 SFGDDDFNFSGSLAVLFELAKELRREGNILVHEGKTKTNTAELQQAWYTLVT----LAQV 421
Query: 347 LGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRK 406
LGL L+ ++D + A ++ D+ LIE+R AARK+KDF++SD+IR L +
Sbjct: 422 LGLEAK------LEAVEDNS--SAGFSDADIETLIEQRNAARKSKDFAESDRIRNQLQAQ 473
Query: 407 GIALMDMGKETIW 419
G+ L+D + T W
Sbjct: 474 GVTLIDSKEGTRW 486
>gi|212711245|ref|ZP_03319373.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
gi|212685974|gb|EEB45502.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
Length = 462
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 235/420 (55%), Gaps = 33/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ L+ R E D L L P +PR + H+ +I ++ +I
Sbjct: 73 KIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEIIELTESLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V+ P+YG LS Q L+ +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVADNGDVMFEVKTDPSYGLLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKEGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + E Y +R+FL+S HYRS LNY+ L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLLSGHYRSQLNYTEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + +P A I K R F M+DD NT +
Sbjct: 313 RTALERLYTALRGTDKSATP-------------AGGEIYKSR--FCEAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A LN LK + +++ + +++E+ ++LGLL E
Sbjct: 358 ALFDMA-----RELNRLKTEN--------MDAANGMAAQLRELAKVLGLLEQD--PETFL 402
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q ++ AE+ + + LI++R AR++KD++ +DQ R LT GI L D T WR
Sbjct: 403 QGGAQSEDDAEVAK--IEALIKQRNDARQSKDWALADQARDALTAMGIVLEDSSAGTTWR 460
>gi|152980026|ref|YP_001353798.1| cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
gi|166200150|sp|A6SZV1.1|SYC_JANMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151280103|gb|ABR88513.1| Cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
Length = 464
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 240/426 (56%), Gaps = 45/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ +L+ R+ D A L P ++PR ++++ Q+ +I + N
Sbjct: 75 KIIKRAAENGESISALTQRFIDAMDEDAAALGVQKPDHEPRATNYVPQMLGLIEALERNG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V P YG+LSG+ L++ RAGERV V++ KR+P DF LWK++K EP
Sbjct: 135 LAYKSSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTGKRDPLDFVLWKSSKEAEP 194
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
W S WG GRPGWHIECSAM+ L +FDIHGGG DL FPHHENEIAQS A Q +
Sbjct: 195 DEVKWASKWGSGRPGWHIECSAMACELLGQQFDIHGGGADLQFPHHENEIAQSEGASQHT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR++ +Y +R F++ AHYRS LNYS L
Sbjct: 255 FVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLAKYDSEVVRFFILRAHYRSQLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A +A+ +Y L+ ++P Q AA D F M+DD NT
Sbjct: 315 DDARNALTRMYTALK----GVAPDQ----------AALDMTEAHALRFAEAMNDDFNTPL 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ + + +N K +Q + L I+GLL A
Sbjct: 361 AVAVLFE-----LANEINKTKSPALARQLVGLAG--------------IVGLLQRPA--- 398
Query: 358 VLQQLKDKALKRAELTEED--VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-G 414
QQ L E E + V++ IE R A+K K+F+++D+IRA+L KGI L D G
Sbjct: 399 --QQFLHAGLANGEDGEMETFVVEQIEARVNAKKAKNFAEADRIRAELLEKGIILEDKPG 456
Query: 415 KETIWR 420
T WR
Sbjct: 457 GLTEWR 462
>gi|383753596|ref|YP_005432499.1| putative cysteinyl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365648|dbj|BAL82476.1| putative cysteinyl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 475
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 234/422 (55%), Gaps = 24/422 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIR AN+ G +S RY Y M L PRVS+ + I M+ ++++
Sbjct: 73 KIIRTANEEGVKWSDISGRYIDAYFKAMDALNVKRADIYPRVSETIPDIIAMVQKLVDKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY V+ GDVF+ VEK YG+LSG++LE+ +AG R+ VD RK +P DFALWKAAK GEP
Sbjct: 133 YAYAVDNGDVFYRVEKFAGYGKLSGRKLEDMQAGARIDVDERKEHPMDFALWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS--CAACQDSN 178
SWDSPWG GRPGWHIECS MS YL KFD HGGG DLIFPHHENEIAQS C + S
Sbjct: 193 SWDSPWGKGRPGWHIECSTMSLKYLGEKFDFHGGGSDLIFPHHENEIAQSQACIGDEHSF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YW+HNG +T +NEKMSKS NFFT++ I Y +R F++ HYRSPL++S +L
Sbjct: 253 AQYWLHNGFITIHNEKMSKSKNNFFTVKDILAEYPGEVVRFFILQTHYRSPLDFSDERLK 312
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ + Q+ + L+ + GK+ A+ ++ EFH M DD NT+
Sbjct: 313 EAQTSLNRLAQSKGFMDELLA---KAGKSDTAKELADKAAGYVK-EFHEAMDDDFNTALA 368
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F ++ +N+ + + E+ K+ K + I+G+
Sbjct: 369 ISQIFA-----LSKDINIYYQDVMNKGTAFDSENFAKVAEAYKLMTGIIGIFEQ------ 417
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ D L + +I R ARK K+++ +D+IR +L G+ L D +
Sbjct: 418 -EEAADDGLANKLMD-----LIINIRQDARKEKNWALADKIRDELKEAGVILEDTPQGVR 471
Query: 419 WR 420
W+
Sbjct: 472 WK 473
>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 459
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 235/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D L L P ++PR + H+ +I ++ ++I
Sbjct: 73 KIIKRALENKETCEQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEIIAIVEKLIQRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A + V+
Sbjct: 193 SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGNQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL+SAHYRS LNYS L+ A
Sbjct: 253 YWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLSAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + D F M DD NT + L+
Sbjct: 313 HGALERLYTALRGTDKSAVAF-----------GGENFV----DTFREAMDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A LN LK + ++ + ++E+ ILGLL
Sbjct: 358 VLFEMA-----RELNKLKTED--------MDKANGLAARLRELAGILGLL---------- 394
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
QL + +A +++V + LI++R AR KD+ +D R LT+ GI L D T
Sbjct: 395 QLDPEQFLQAGSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTQMGIVLEDGLNGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|258404670|ref|YP_003197412.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
gi|257796897|gb|ACV67834.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
Length = 485
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 231/421 (54%), Gaps = 13/421 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + ++ +Y Y DM L P ++P+ ++H++ + + +I
Sbjct: 72 KIIKRAAEEHLEADEVAQKYIAAYYEDMERLGVQPANFEPKATEHIQDMIGLAENLIAKG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V P+YG LSG+ L+ RAG R+A K +P DFALWK AK EP
Sbjct: 132 HAYATASGDVYFRVRSLPSYGSLSGRELDTMRAGARIAPGEEKEDPLDFALWKRAKPEEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWH+ECSAMS +L DIHGGG DL FPHHENE AQS AA
Sbjct: 192 SWPSPWGNGRPGWHLECSAMSERFLGLPLDIHGGGQDLAFPHHENERAQSLAASGKELAR 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
+W+HNG V EKMSKSLGNF TIR I Y P LR+FL++ HYRSPL+++ +D A
Sbjct: 252 FWVHNGFVQVEAEKMSKSLGNFITIRDILSYYLPEVLRYFLVTKHYRSPLDFNWEVMDEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +YQT Q ALS + + + I+ L ++ M DDLNT+ L
Sbjct: 312 EKGLRRLYQTRQHIAEALS--RSNWSKTELPSELSAEIDDLDAKWRQNMEDDLNTAGALG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F +N N + + + ++ + + L +I++ + + +LGL P A+
Sbjct: 370 HVFT-----LNRLANRILEDKTWRKAEAGGKLLERIQSIFEHIGNVLGLFQQTPDAF--- 421
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L L+ + KR + V QLI +R AR+ KDF+ +D +R L GI + D + +
Sbjct: 422 LDDLRTQKAKRKGIDTSAVAQLITKRQEARRAKDFTTADSVRQQLEEMGIEVQDTPQGPV 481
Query: 419 W 419
W
Sbjct: 482 W 482
>gi|56418620|ref|YP_145938.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261417586|ref|YP_003251268.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|319765244|ref|YP_004130745.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
gi|61216117|sp|Q5L429.1|SYC_GEOKA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56378462|dbj|BAD74370.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261374043|gb|ACX76786.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|317110110|gb|ADU92602.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
Length = 466
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 168/424 (39%), Positives = 235/424 (55%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ A +LGE+ +++ R+ + Y D+ L C PRV+++++ I + I +I+
Sbjct: 75 KLIKAARELGESVPAIAERFIEAYFEDIQALGCKKADIHPRVTENIDTIIEFIQALIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV++ K YG+LS Q ++ +AG R+ + +K +P DFALWKAAK GE
Sbjct: 135 YAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEIGEKKDDPLDFALWKAAKEGEIC 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 195 WDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKY 254
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ NNEKMSKSLGNF + I P LR F++S HYR P+NYS L+SA
Sbjct: 255 WLHNGYLNINNEKMSKSLGNFVLVHDIIREIDPQVLRFFMLSVHYRHPINYSEELLESAR 314
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
+ L+ + A S Q H A N D I +R F M DD NT+
Sbjct: 315 -------RGLERLKTAYSNLQ-HRLQASTNLTDNDEEWVSRIADIRASFIREMDDDFNTA 366
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ + F+ A K N L Q K +I + + E +++ +LGL
Sbjct: 367 NGIAVLFELA-KQANLYL------QEKTTSEKVIHAFLR---EFEQLADVLGL------- 409
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
LK+ EL +E++ LI++R ARKN+DF+ +D+IR +L K I L D +
Sbjct: 410 ---------TLKQDELLDEEIEALIQKRNEARKNRDFALADRIRDELRAKNIILEDTPQG 460
Query: 417 TIWR 420
T W+
Sbjct: 461 TRWK 464
>gi|170754736|ref|YP_001783143.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|429246816|ref|ZP_19210112.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001628]
gi|229558626|sp|B1IGH6.1|SYC_CLOBK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169119948|gb|ACA43784.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|428756150|gb|EKX78726.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001628]
Length = 465
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 242/420 (57%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L +R+ +EY D DL T PR ++ ME+I ++ +I
Sbjct: 72 KMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEIIKFVSDLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA+WK+ K GEP+
Sbjct: 132 YAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFAIWKSQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQSEARTGKQFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +N+S+ LDS
Sbjct: 252 WLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQINFSMELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++ + E L + E + + E + K ++++ +M DD NT+ ++
Sbjct: 312 AALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKMDDDFNTADAIS 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N+++ + K+ + L LI +E+ LG+L + + +
Sbjct: 370 VIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGNPLGILQESTKASLEE 418
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+++ +R + ARK K+++ +D+IR +L +GI L D + W+
Sbjct: 419 EIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIVLEDTPQGVRWK 463
>gi|388467470|ref|ZP_10141680.1| cysteine--tRNA ligase [Pseudomonas synxantha BG33R]
gi|388011050|gb|EIK72237.1| cysteine--tRNA ligase [Pseudomonas synxantha BG33R]
Length = 460
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 230/420 (54%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ R D A L L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWK K GEP
Sbjct: 133 YAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDFVLWKGTKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSAINYSEDNLKDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ ++P AR F M+DD T
Sbjct: 313 KGALERFYHALKGLP-CVAPAGGEAFVAR---------------FTEVMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ S +++ + +KE+ +LG+L E
Sbjct: 357 VLFE-----MVREINRLRE--------SDLDAAAGLAARLKELASVLGVLQ----MEADD 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ A R + E D LI+ R AAR NKD+++SD+IR LT G+ L D T WR
Sbjct: 400 FLQAGAEGRVDAAEVDA--LIQARLAARANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|359785387|ref|ZP_09288539.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
gi|359297316|gb|EHK61552.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
Length = 482
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 174/427 (40%), Positives = 238/427 (55%), Gaps = 31/427 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA++ GE +L+ R D A L LPP+ +PR + H+ I MI +I+
Sbjct: 72 KILKRADENGETISALTERMIDAMHDDEARLNVLPPSREPRATGHIGDIIAMIETLIDKG 131
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY + GDV++ V K NYG+L+ ++L++ R+G RV VD K +P DF LWKAAK E
Sbjct: 132 FAYPAKNGDVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKEDPLDFVLWKAAKPTEA 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA + V+
Sbjct: 192 HWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPHHENEIAQSEAATGKTYVN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V N EKMSKSLGNFFTIR + + P +R+ L+++HYRS +NYSV L A
Sbjct: 252 TWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRYLLVASHYRSAINYSVDSLVEA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQE--HGKTARIN-PAAEDCINKLRDEFHARMSDDLNTSH 297
++ Y L+ EV S +E T+ + A+++ + + F M DD NT
Sbjct: 312 RKSLTRFYTALEGVEVQESVGEELQQAPTSEVAFIASKEEVAAYSERFTTAMDDDFNTPE 371
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L F + +N K + P++ L +E R +LGL
Sbjct: 372 ALAVLFD-----LAREVNRAKGESPQKALLLALELKRLAS--------VLGL-------- 410
Query: 358 VLQQLKDKALKRAE-----LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
LQQ D LK A+ L+E ++ I +R A+ +KDF+++D IR +L GI L D
Sbjct: 411 -LQQSPDTFLKGAQQHGVALSETEIEAKIAQRKEAKASKDFAQADAIRDELAALGIILKD 469
Query: 413 MGKETIW 419
+ T W
Sbjct: 470 SREGTTW 476
>gi|294496962|ref|YP_003560662.1| cysteinyl-tRNA synthetase [Bacillus megaterium QM B1551]
gi|294346899|gb|ADE67228.1| cysteinyl-tRNA synthetase [Bacillus megaterium QM B1551]
Length = 465
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 240/421 (57%), Gaps = 33/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ A +LGE+ +++NR+ Y D + L C PRV+++M+ I + I +++
Sbjct: 74 KLIKAAKELGEDVPTIANRFIDAYFEDTSALGCKHADVHPRVTENMDIIIEFIDELVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV++ K YG+LS Q ++ ++G R+ V +K +P DF LWKA K GE +
Sbjct: 134 YAYESEGDVYYRTRKFEGYGKLSHQSIDELQSGARIEVGEKKEDPLDFTLWKATKDGEIA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A S Y
Sbjct: 194 WDSPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKSFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NY+ L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKKHDPSLLRFFILSVHYRHPINYNEEILENTR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSHIL 299
++ LQ L+ E T A+E + + +LR+ F M DD NT++ +
Sbjct: 314 KG----FERLQTAYGNLTHRLE-AATNLQEDASEWFEKLKELRETFVEEMDDDFNTANAI 368
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F+ A + ++L +L++ +IE+ K E KE+ +G+
Sbjct: 369 SVLFELAKQ---ANLYLLEQTTST----DVIEAFIK---EFKELGAAIGI---------- 408
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
AEL +E++ QLI+ R ARK+++F +DQIR +L K I L D + T W
Sbjct: 409 ------TFGEAELLDEEIDQLIQGRIQARKDRNFQLADQIRDELKAKNIILEDTAQGTRW 462
Query: 420 R 420
+
Sbjct: 463 K 463
>gi|417846323|ref|ZP_12492331.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
gi|341952725|gb|EGT79246.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
Length = 459
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 233/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ +R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAETVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVVF-----------GGENFVATFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N LK + E + ++E+ ILGL LQ
Sbjct: 358 VLFE-----MVREINKLKTEDA--------EKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD+S +D R +LT GI L D T
Sbjct: 396 QDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWSAADAARNELTAMGIVLEDGPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|156742112|ref|YP_001432241.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
gi|156233440|gb|ABU58223.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
Length = 478
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 234/433 (54%), Gaps = 49/433 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA+ LG +P L+ Y E+L D+ L PR ++ M +I+ I+++I
Sbjct: 74 KIINRAHALGRDPKELAESYIAEFLEDLEALNVKRAHIYPRATETMPEIQRFISRLIETG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AYVV+GDV+F V +P+YG+LS + L++ AG R+ +D RK NPADFALWKAAK GEP
Sbjct: 134 HAYVVDGDVYFRVSTAPDYGKLSRRSLDDMIAGNRIGIDERKENPADFALWKAAKPGEPF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWGPGRPGWHIECSAM+ +L + DIHGGG DLIFPHHENEIAQ+ + + Y
Sbjct: 194 WDSPWGPGRPGWHIECSAMNLAHLGEQIDIHGGGTDLIFPHHENEIAQTESLTGKTFARY 253
Query: 182 WMHNGHV---------TNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNY 232
WMHNG + T EKMSKSLGN TIR+ RYHP LR ++S+ YRSPL +
Sbjct: 254 WMHNGMLQIQTRLADGTYKLEKMSKSLGNVVTIREFLARYHPDVLRLTVLSSSYRSPLAF 313
Query: 233 SVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE---DCINKLRDEFHARM 289
+ A+D + L AL P T PA E + R+ F A M
Sbjct: 314 GE---EIAADQ----ERKLARLRSALEP---PIGTIEAGPAVEVLLAAVRTARERFIAAM 363
Query: 290 SDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG- 348
DD NT+ L F D ++ IN++ + P + + +E++ +LG
Sbjct: 364 DDDFNTAGALAALF-DLVRSINTARDAGVGGAP----------FAEAQATFRELVDVLGL 412
Query: 349 -LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 407
L+ P ++ D L+E R+ RK K F+ +D +R L + G
Sbjct: 413 TLIAPRPVTQQAAPFID--------------LLVEVRSELRKAKQFALADMVRDRLAQLG 458
Query: 408 IALMDMGKETIWR 420
+ L D + T W+
Sbjct: 459 VMLEDTPQGTRWK 471
>gi|421838079|ref|ZP_16272066.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001627]
gi|409739613|gb|EKN40247.1| cysteinyl-tRNA ligase [Clostridium botulinum CFSAN001627]
Length = 465
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 242/420 (57%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L +R+ +EY D DL T PR ++ ME+I ++ +I
Sbjct: 72 KMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEIIKFVSDLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA+WK+ K GEP+
Sbjct: 132 YAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFAIWKSQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQSEARTGKQFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +N+S+ LDS
Sbjct: 252 WLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQINFSMELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++ + E L + E + + E + K ++++ +M DD NT+ ++
Sbjct: 312 AALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKMDDDFNTADAIS 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N+++ + K+ + L LI +E+ LG+L + + +
Sbjct: 370 VIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGSPLGILQESTKASLEE 418
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+++ +R + ARK K+++ +D+IR +L +GI L D + W+
Sbjct: 419 EIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIVLEDTPQGVRWK 463
>gi|423364486|ref|ZP_17341976.1| cysteinyl-tRNA synthetase [Bacillus cereus VD022]
gi|401072905|gb|EJP81359.1| cysteinyl-tRNA synthetase [Bacillus cereus VD022]
Length = 465
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 246/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + I K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLVE------IEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ + +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTSK---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN++F+ SDQIR DL + I L D + T
Sbjct: 409 -------ELTQEELLDEEIEELIQKRIEARKNRNFALSDQIRDDLKGRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|399924308|ref|ZP_10781666.1| cysteinyl-tRNA synthetase [Peptoniphilus rhinitidis 1-13]
Length = 465
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 234/423 (55%), Gaps = 35/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP-PTYQPRVSDHMEQIKDMITQIINN 60
++I +AND G ++ RY +E+ D L T PR ++H+ +I + +I+
Sbjct: 72 KMINKANDEGVKVSDIAERYIKEFKKDANGLHLYDYETLNPRATEHIGEIISFVGTLIDK 131
Query: 61 DCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV+F + + +YG+LS + LE+ +G RV ++ K+NP DFALWK K GEP
Sbjct: 132 GAAYVSNGDVYFDISYAKDYGKLSKKNLEDLISGHRVDINDNKKNPQDFALWKNKKEGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W +PWG GRPGWHIECS M+ + DIH GG DL FPHHENEIAQS +
Sbjct: 192 FWSAPWGEGRPGWHIECSVMAKTLIGDNIDIHTGGEDLQFPHHENEIAQSETCNGVPFAN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG +T +NEKMSKS GNFFT+R+I + + LR FL++ YRSP+N+S ++
Sbjct: 252 YWLHNGMITVDNEKMSKSKGNFFTVREIADEFDLEVLRFFLLTTQYRSPINFSREVMEQT 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR---DEFHARMSDDLNTSH 297
+A +Y E A+ E +I+ ++ N ++F M DDLNT+
Sbjct: 312 KNASKRLYNAKYKLEDAI----EKSSVEKISDEEKNLYNSFDKHIEKFENAMEDDLNTAD 367
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+T F D +K IN +L+ K+ L L+ K++ R+LG++
Sbjct: 368 AITAIF-DLIKDINLNLDENNSKEMLNNTLELL----------KKLTRVLGIMEN----- 411
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
R EL+ D+ +LI+ER ARKNKDF+++D+IR +L GI + D T
Sbjct: 412 ----------DREELS-HDIDKLIKERNDARKNKDFARADEIRDNLKEMGIEIEDTRSGT 460
Query: 418 IWR 420
W+
Sbjct: 461 TWK 463
>gi|297528461|ref|YP_003669736.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
gi|297251713|gb|ADI25159.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
Length = 466
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 168/424 (39%), Positives = 235/424 (55%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ A +LGE+ +++ R+ + Y D+ L C PRV+++++ I + I +I+
Sbjct: 75 KLIKAARELGESVPAIAERFIEAYFEDIQALGCKKADIHPRVTENIDAIIEFIQALIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV++ K YG+LS Q ++ +AG R+ + +K +P DFALWKAAK GE
Sbjct: 135 YAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEIGEKKDDPLDFALWKAAKEGEIC 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 195 WDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKY 254
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ NNEKMSKSLGNF + I P LR F++S HYR P+NYS L+SA
Sbjct: 255 WLHNGYLNINNEKMSKSLGNFVLVHDIIREIDPQVLRFFMLSVHYRHPINYSEELLESAR 314
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
+ L+ + A S Q H A N D I +R F M DD NT+
Sbjct: 315 -------RGLERLKTAYSNLQ-HRLQASTNLTDNDEEWVSRIADIRASFIREMDDDFNTA 366
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ + F+ A K N L Q K +I + + E +++ +LGL
Sbjct: 367 NGIAVLFELA-KQANLYL------QEKTTSEKVIHAFLR---EFEQLADVLGL------- 409
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
LK+ EL +E++ LI++R ARKN+DF+ +D+IR +L K I L D +
Sbjct: 410 ---------TLKQDELLDEEIEALIQKRNEARKNRDFALADRIRDELRAKNIILEDTPQG 460
Query: 417 TIWR 420
T W+
Sbjct: 461 TRWK 464
>gi|228477775|ref|ZP_04062403.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
gi|228250467|gb|EEK09681.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
Length = 447
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 231/424 (54%), Gaps = 58/424 (13%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + LS+++ ++ D L P T PRV ++M++I ++ +++
Sbjct: 73 KIIKAANEAGISTKELSDKFIAAFMEDTGQLGIKPATQNPRVINYMDEIITFVSTLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK NP DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVAKSNNYAKLANKTLEDLEIGASGRTDAETERKENPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SWDSPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGK---TARINPAAEDCINKLRDEFHARMSDDLNT 295
+ + D EV L + T ++N A + D F M DD NT
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTEQVNQAE---LQTYLDAFQEAMDDDFNT 355
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
++ +T F D K+INS + +++ +++L++ G++ +
Sbjct: 356 ANGVTVLF-DMAKWINSG-----------------NYDQTVKDAFEKMLQVFGIV----F 393
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
E E+ +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 394 EE-------------EVLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKE 440
Query: 416 ETIW 419
W
Sbjct: 441 GVRW 444
>gi|83748223|ref|ZP_00945249.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|207743491|ref|YP_002259883.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
gi|83725064|gb|EAP72216.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|206594889|emb|CAQ61816.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
Length = 465
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 239/426 (56%), Gaps = 44/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE +L++R+ D L P ++PR ++++ Q+ MI ++ N
Sbjct: 75 KIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQMLSMIGKLQANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV K P YG+LSG+ LE+ RAGERVA + K++P DF LWK+AKA EP
Sbjct: 135 LAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDAKQDPLDFVLWKSAKADEP 194
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHENEIAQ+ A ++
Sbjct: 195 AESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHENEIAQAEGANGNT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +HYRS LNYS L
Sbjct: 255 FVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSHYRSDLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A A+ +Y L+D A+ A D F M+DD NT
Sbjct: 315 DDARHALTRLYTALKDVPAAVG-------------AKPDWSESHGQRFREAMNDDFNTPV 361
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAY 355
+ F+ + S +N K + P + N++ + ++GLL P A+
Sbjct: 362 AMAVLFE-----LASEVN--KTRSP------------ALVNQLAALGGVMGLLGRDPHAF 402
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-G 414
LQ A + E V IE R A+ +DF+++D IRADL GI L D G
Sbjct: 403 ---LQGGVGAAADGLDAAE--VEARIEARRVAKAERDFARADGIRADLLAAGIVLEDKPG 457
Query: 415 KETIWR 420
T WR
Sbjct: 458 GVTEWR 463
>gi|373859609|ref|ZP_09602335.1| cysteinyl-tRNA synthetase [Bacillus sp. 1NLA3E]
gi|372450604|gb|EHP24089.1| cysteinyl-tRNA synthetase [Bacillus sp. 1NLA3E]
Length = 465
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 162/425 (38%), Positives = 239/425 (56%), Gaps = 41/425 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ A LGE+ +++NR+ Y D++ L C PRV+++M+ I D I+++++
Sbjct: 74 KLIKAAKTLGEDVPTIANRFIDAYFEDVSALGCKQANVHPRVTENMDIIIDFISELVDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F K YG+LS Q ++ + G R+ V +K++ DFALWKAAKAGE +
Sbjct: 134 FAYESAGDVYFRTRKFEGYGKLSHQSIDELKVGARIDVGEKKQDDLDFALWKAAKAGEIA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 194 WESPWGMGRPGWHIECSAMAKKYLGDTIDIHAGGQDLTFPHHENEIAQSEALSGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I +++ P +R F++S HYR+P+NYS L++
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFVLVHDIIKKHAPEVVRFFMLSVHYRNPINYSDELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
A+ + + Q+ +H A N D I+ L+ EF M DD+NT+
Sbjct: 314 AALERLKTSYQNL--------KHRIDASTNLTENDQEWIGKISDLQGEFIREMDDDINTA 365
Query: 297 HILTGAFQDALKFINSSLN-MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ ++ F+ ++ N L +K + ++ SL +++ +LGL
Sbjct: 366 NGISVLFE-----LSKQANYYLLEKNTSTEVINAFTSL------FEKLFGVLGL------ 408
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
+L+ EL + ++ LIE+R ARKN+DF SDQIR L I L D +
Sbjct: 409 ----------SLENQELLDIEIETLIEQRIEARKNRDFQLSDQIRDQLKDMNIILEDTPQ 458
Query: 416 ETIWR 420
T W+
Sbjct: 459 GTRWK 463
>gi|307243392|ref|ZP_07525549.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
gi|306493202|gb|EFM65198.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
Length = 467
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 235/422 (55%), Gaps = 31/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+R+++ G +P ++ +Y +EY +D L T P+V+D+++ I + +I+
Sbjct: 72 KIIKRSHEEGISPEEVAEKYIKEYFIDCDGLGIKRATVHPQVTDNIDNIIVFVQDLIDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV F K YG+LS Q +E G R+ VD +K +P DF LWKA K GEP
Sbjct: 132 YAYEAGGDVLFRTRKFKEYGKLSHQNIEELELGARIDVDDKKEDPLDFVLWKAKKEGEPG 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS MS YL + DIH GG DL FPHHENEIAQS + Y
Sbjct: 192 WQSPWGEGRPGWHIECSVMSNRYLGNTIDIHAGGQDLQFPHHENEIAQSECRNGHTFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ + EKMSKSLGNFFT+R I+ +Y +R FL++ YR+P+N+S L+ A
Sbjct: 252 WMHNGYINVDGEKMSKSLGNFFTVRDISNKYDLGLVRFFLLATQYRNPVNFSDTVLEQAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI---NKLRDEFHARMSDDLNTSHI 298
+ + + E L + + + +D + +K R+ F M DDLNT+
Sbjct: 312 AGLERLTNARDNAEFILGNLAD----SSLRDEEKDMVAGLDKYRERFIEAMDDDLNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ A KF+N++++ K+ Q L + NE+ VL I
Sbjct: 368 ISVIFELA-KFMNTNISDQSSKEFVQLNLDIF-------NELTGVLNI------------ 407
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+K+++ + + V LI +RA A+K K+F+ +DQIR +LT GIA+ D +
Sbjct: 408 ----ANKSVEEDDSLSQKVEDLIAKRAQAKKEKNFALADQIRDELTAMGIAIEDTRQGVK 463
Query: 419 WR 420
W+
Sbjct: 464 WK 465
>gi|386825986|ref|ZP_10113101.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
gi|386377168|gb|EIJ17990.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
Length = 461
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 226/422 (53%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ L+ R E D L P +PR + H+ +I ++ ++I+ D
Sbjct: 73 KIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEIIEITQRLIDRD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G A PA + F M DD NT +
Sbjct: 313 RTALERLYTALR------------GTNANAQPAGGEAFEA---RFREAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F + +N LK + + + + E++++ ++LGLL P + +
Sbjct: 358 ALFD-----LARDVNRLKGED--------MAAANGLAAELRKLAKVLGLLQQEPEQFLQS 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + E LI++R ARK KD++ +D R L I L D + T
Sbjct: 405 GAQADDGEVAEIE-------ALIKQRNDARKAKDWALADAARDRLNEMSIVLEDGSQGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|449092807|ref|YP_007425298.1| cysteinyl-tRNA synthetase [Bacillus subtilis XF-1]
gi|449026722|gb|AGE61961.1| cysteinyl-tRNA synthetase [Bacillus subtilis XF-1]
Length = 466
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 228/424 (53%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++S R+ + Y D+ L C PRV ++M+ + + Q++
Sbjct: 74 KLIKAANELGEDVPTISERFIKAYFEDVGALGCRKADLHPRVMENMDANIEFVDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPQLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED--CINKL---RDEFHARMSDDLNTS 296
A + A S Q H + N +D I K+ R F M DD NT+
Sbjct: 314 SA-------FNRLKTAYSNLQ-HRLNSSTNLTEDDDQWIEKVEEHRKAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L K + IE +I + +LG
Sbjct: 366 NAISVLF-DLAKHANYYLQ--KDHTADHVITAFIEMFDRI-------VSVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|407071860|ref|ZP_11102698.1| cysteinyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
Length = 461
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 238/422 (56%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++ + +I +++ ++I
Sbjct: 73 KIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEIIELVEKLIQRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF LWK +K GEP
Sbjct: 133 FAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ ++ +P E+ + + F M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDLTAAP-----------AGGEEYVTR----FSTAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ A +N +K + IE + ++E+ I+G+L P A+ +
Sbjct: 358 VLFEMA-----RDINRIKTES--------IEKASALGALMRELADIIGILHQDPEAFLK- 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
D A E+ E + LI+ R +R +KD++ +D R L GI L D + T
Sbjct: 404 ----GDAAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNELGIVLEDGPEGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|152996132|ref|YP_001340967.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
gi|189082069|sp|A6VX53.1|SYC_MARMS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150837056|gb|ABR71032.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
Length = 460
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 240/419 (57%), Gaps = 35/419 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ SL+ R D L P +P+ ++ M++I DM+ +I+
Sbjct: 73 KIIKRAEENNESTQSLTERMIAAQREDELRLGNKMPDREPKATEFMQEIIDMVQVLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ K +YG+L+ ++LE+ AG R+ V+ K +PADF LWK AKAGE
Sbjct: 133 FAYQGTSGDVYYRATKFKDYGKLNNRKLEDMLAGARIDVEVAKEHPADFVLWKQAKAGEV 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS + L S FDIHGGG DL FPHHENEIAQS AA V+
Sbjct: 193 SWSSPWGEGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFPHHENEIAQSEAATGKEYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V NNEKMSKSLGNFFT+R + +++P +R+ ++S+ YRS ++YS L A
Sbjct: 253 YWMHCGAVRVNNEKMSKSLGNFFTVRDVLAKFNPEVVRYLMVSSQYRSAIDYSDQSLLEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ +VA S P + F M DD NT+ ++
Sbjct: 313 KVALERLYTALRQQQVAES----------FEPTV------FTERFEEAMKDDFNTAVAVS 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + LN K K + SL+ + E++ + +LGLL Y +
Sbjct: 357 VLFE-----LVRELN--KAKTEDANKASLLAA------ELRSLAELLGLL----YQDPEY 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
L++ + L E + LI+ER ARK+K+F++SD+IR +L +GI L+D + T W
Sbjct: 400 FLQNSTVSEG-LGEVAIQALIDERTQARKDKNFARSDEIRDELASQGIELLDSREGTTW 457
>gi|383763829|ref|YP_005442811.1| cysteinyl-tRNA synthetase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381384097|dbj|BAM00914.1| cysteinyl-tRNA synthetase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 469
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 230/419 (54%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + G +PL L+N Y EYL + DL +P T PRVS M+ I MI +
Sbjct: 74 KIIRRAAEQGRDPLELANHYANEYLRHLKDLNVMPATVYPRVSTEMDWITQMIAGLEEEG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F V K +YG+LSG+RLE AG R+ D+RK +PADFALWK+AK GEP+
Sbjct: 134 YAYRLDGDVYFRVTKDEDYGKLSGRRLEEALAGVRIEEDARKEHPADFALWKSAKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSP+GPGRPGWHIECSAM H+L DIHGGG DLIFPHHENEIAQS + Y
Sbjct: 194 WDSPFGPGRPGWHIECSAMCLHHLGEVVDIHGGGNDLIFPHHENEIAQSESYTGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+G + EKMSKSLGN TI + +++ ALR + + HYR P+ YS ++SA
Sbjct: 254 WMHHGMLQLAGEKMSKSLGNLITIDEFLKKHSADALRLLIFTGHYRKPVVYSEEAIESAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++L AL P Q T A R F M DD NT+ +
Sbjct: 314 -------RSLARLRSALRPPQGSVTTGEAADALRIATENARVAFVEAMDDDFNTAGAIAA 366
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ A + INS+ + + + ++ ++E+ +LGL + +
Sbjct: 367 LFELA-RAINSA------RSAGVAGPFFVAA----QHTLRELAGVLGL-------TLAEP 408
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D + A D+ L+ R+ R+ K ++ +D++R L G+ L D + T WR
Sbjct: 409 TADAGVNVAAQPFIDL--LVSVRSELRQAKQWALADKVRDGLRALGVVLEDTPEGTRWR 465
>gi|442320001|ref|YP_007360022.1| cysteinyl-tRNA synthetase [Myxococcus stipitatus DSM 14675]
gi|441487643|gb|AGC44338.1| cysteinyl-tRNA synthetase [Myxococcus stipitatus DSM 14675]
Length = 492
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 244/419 (58%), Gaps = 12/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A++ GE P++L++RY + + D L + P P+VS+H+ +I +I +++
Sbjct: 80 KIIKAAHETGEAPVALASRYVEYFREDAKALHMVEPDVAPKVSEHLPEIVRIIQTLVDKG 139
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F+V +Y +LS + L++ GERV +KR P DFALWKAAK GEPS
Sbjct: 140 FAYESQGDVYFSVRADKDYAKLSKRNLDDLSVGERVQPGDQKREPLDFALWKAAKPGEPS 199
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAMS YL FDIHGG +DLIFPHHENEIAQS +A Y
Sbjct: 200 WESPWGLGRPGWHIECSAMSEKYLGETFDIHGGALDLIFPHHENEIAQSESAHGKDLAKY 259
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH G + KMSKSLGN +R E+ ALR F +S HYR PL++S L A
Sbjct: 260 WMHCGFLDLEGAKMSKSLGNVVRLRDALEKVDAEALRFFFLSTHYRHPLSFSDKALADAE 319
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ Y Y+TL+ + L+ GK P + ++ EF M DD N++ L
Sbjct: 320 ARMEYFYETLRKVDERLA-----GKDFGAGPVHGEP-HRFLGEFECAMDDDFNSAGALG- 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
AL + +N L K P + + + +L + ++V++V +LGL A + +L++
Sbjct: 373 ----ALSGLFGMMNELTDKPPVKDKPLVGRTLLALRDDVRKVSGVLGLFEDDAGAWLLRR 428
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ +R + +V +L+ ER AAR KDF+ +D++RA L KG+ +MD T W+
Sbjct: 429 RERAVRERG-IDVAEVERLLSERTAARAAKDFAAADRVRATLKEKGVEIMDTAGGTSWK 486
>gi|419797368|ref|ZP_14322854.1| cysteine--tRNA ligase, partial [Neisseria sicca VK64]
gi|385698247|gb|EIG28621.1| cysteine--tRNA ligase, partial [Neisseria sicca VK64]
Length = 387
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 228/421 (54%), Gaps = 54/421 (12%)
Query: 17 LSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVE 75
L+ R+ Q D L L P +P+ ++++ Q+ MI +I N AY GDV++AV
Sbjct: 2 LTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVR 61
Query: 76 KSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHI 135
+ YG+LSG+ L++ RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHI
Sbjct: 62 EFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHI 121
Query: 136 ECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD----------------SNV 179
ECSAMS + FDIHGGG DL FPHHENEIAQS A S+V
Sbjct: 122 ECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHV 181
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YW+HNG + + EKMSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD
Sbjct: 182 KYWLHNGFIRVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDD 241
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A A+ +Y TL++ A E+ N F+A M+DD T +
Sbjct: 242 AKGALTRLYTTLKNTPAAEFELSENA-------------NDYTRRFYAAMNDDFGTVEAV 288
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ L + K L L+ + I+GLL +
Sbjct: 289 AVLFE------------LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RDPT 325
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ L+ A+ L+ E++ LI +R AR +K++++SD+IR L I L D T W
Sbjct: 326 EFLQGGAVSDG-LSNEEIEDLIAQRKQARADKNWAESDRIRDLLNEHKIILEDNADGTTW 384
Query: 420 R 420
R
Sbjct: 385 R 385
>gi|422336724|ref|ZP_16417697.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
gi|353346036|gb|EHB90323.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
Length = 459
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 234/423 (55%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D L L P ++PR + H+ +I ++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEITAIVEKLIQRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A + V+
Sbjct: 193 SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGNQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ ++ RD M DD NT + L+
Sbjct: 313 HGALERLYTALRGTDKSAVAF-----------GGENFVDAFRDA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A LN LK + + + ++E+ ILGLL
Sbjct: 358 VLFEMA-----RELNKLKTED--------MAKANGLAARLRELAGILGLL---------- 394
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
QL + +A +++V + LI++R AR KD+ +D R LT GI L D T
Sbjct: 395 QLDPEQFLQAGSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTEMGIVLEDGPNGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|340397950|ref|YP_004726975.1| cysteinyl-tRNA synthetase [Streptococcus salivarius CCHSS3]
gi|338741943|emb|CCB92448.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus salivarius CCHSS3]
Length = 447
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 231/424 (54%), Gaps = 58/424 (13%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + LS+++ ++ D L P T PRV ++M++I ++ +++
Sbjct: 73 KIIKAANEAGISTKELSDKFIAAFMEDTGQLGIKPATQNPRVINYMDEIIAFVSTLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK NP DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVAKSNNYAKLANKTLEDLEIGASGRTDAETERKENPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SWDSPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGK---TARINPAAEDCINKLRDEFHARMSDDLNT 295
+ + D EV L + T ++N A + D F M DD NT
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTEQVNQAE---LQTYLDAFQEAMDDDFNT 355
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
++ +T F D K+INS + +++ +++L++ G++ +
Sbjct: 356 ANGVTVLF-DMAKWINSG-----------------NYDQTVKDAFEKMLQVFGIV----F 393
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
E E+ +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 394 EE-------------EVLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKE 440
Query: 416 ETIW 419
W
Sbjct: 441 GVRW 444
>gi|75909922|ref|YP_324218.1| cysteinyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
gi|109894882|sp|Q3M6R3.1|SYC_ANAVT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|75703647|gb|ABA23323.1| cysteinyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
Length = 486
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 174/432 (40%), Positives = 247/432 (57%), Gaps = 36/432 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+ RA + G +SNR+ Y D+ L L PRV++H+ +I +I +
Sbjct: 74 KILNRAKEQGSTMAEVSNRFIDAYFADIRRLNVLDADEYPRVTEHIPEIHQLIQILEEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD-----SRKRNPADFALWKAAK 116
AY V GDV++ VE+ P+YG+LSG+ LE +AG VD +K++P DFALWKAAK
Sbjct: 134 LAYAVGGDVYYRVERFPSYGKLSGRELEQMQAGASGRVDVEDSEPKKQHPFDFALWKAAK 193
Query: 117 AGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD 176
GEP+WDSPWG GRPGWHIECSAM L + DIHGGG DLIFPHHENEIAQS AA
Sbjct: 194 PGEPAWDSPWGQGRPGWHIECSAMIRSKLGATIDIHGGGGDLIFPHHENEIAQSEAAMNQ 253
Query: 177 SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER--------YHPLALRHFLISAHYRS 228
YW HNG V N +KMSKSLGNF TIR++ + +P+A+R F++ AHYR
Sbjct: 254 PLARYWTHNGMVMVNGQKMSKSLGNFITIRELLDGVGSWKGDPVNPMAVRLFVLQAHYRK 313
Query: 229 PLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR 288
PL+++ + +A ++ ++TL+ E L +Q K +A I +L F
Sbjct: 314 PLDFTEEAIANAENS----WKTLK--EGLLFGYQYGEKLGWGQESA--IIPELATRFQEL 365
Query: 289 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 348
DD N S L F+ A K + N+L + + + + L++ N + + ++LG
Sbjct: 366 GDDDFNFSGGLAVLFELA-KELRREGNILVHEGTTK---TPSDELQRQWNTLVTLGKVLG 421
Query: 349 L-LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKG 407
L P D+ L + L++ D+ LIE+R AARKNK+FS+SD+IR +L +G
Sbjct: 422 LEATP----------DDETLTQPGLSDTDIEALIEQRQAARKNKNFSESDRIRNELQAQG 471
Query: 408 IALMDMGKETIW 419
+ L+D + T W
Sbjct: 472 VTLIDSPQGTRW 483
>gi|394989192|ref|ZP_10382026.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
gi|393791611|dbj|GAB71665.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
Length = 463
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 182/420 (43%), Positives = 235/420 (55%), Gaps = 32/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E +L+ R+ D L P ++PR + ++ + MI +++N
Sbjct: 73 KIIKRAAENHEPIDALTGRFIAAMDEDATKLGVEKPEHEPRATQYVPGMIAMIQALMDNG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV ++V K P YG+LSG+ L++ RAGERV V K +P DF LWK+AK GEP
Sbjct: 133 LAYVARSGDVCYSVHKFPGYGKLSGKSLDDLRAGERVDVAVGKDDPLDFVLWKSAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
WDSPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS +V+
Sbjct: 193 QWDSPWGQGRPGWHIECSVMSDALLGEHFDIHGGGADLQFPHHENEIAQSEGTHGHQHVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V +NEKMSKSLGNFFTIR++ ERY +R F++ AHYRSPLNYS LD A
Sbjct: 253 YWIHNGFVRVDNEKMSKSLGNFFTIREVLERYDAEVVRFFILRAHYRSPLNYSDQHLDDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L++ SP HG A D + F A M DD NT+ +
Sbjct: 313 KGALTRLYTALKNVPPHPSPLTPHG-------VAIDWHDPYAAAFKAAMEDDFNTAEAVA 365
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A N K KQ L LR + +LGLL G SE LQ
Sbjct: 366 VLFDLA--------NEANKTHDKQ----LASLLRTLGG-------VLGLLQRGP-SEFLQ 405
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ T E + Q I R AA+K KD++ +D+IR +L +G+ L D + T+WR
Sbjct: 406 ----GGAGESGCTPEQIEQRIAARIAAKKAKDYAAADRIRKELLDQGVVLEDTPQGTVWR 461
>gi|387783222|ref|YP_006069305.1| cysteine--tRNA ligase (Cysteinyl-tRNA synthetase) (CysRS)
[Streptococcus salivarius JIM8777]
gi|338744104|emb|CCB94470.1| cysteine--tRNA ligase (Cysteinyl-tRNA synthetase) (CysRS)
[Streptococcus salivarius JIM8777]
Length = 447
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 231/424 (54%), Gaps = 58/424 (13%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + LS+++ ++ D L P T PRV ++M++I ++ +++
Sbjct: 73 KIIKAANEAGISTKELSDKFIAAFMEDTGQLGIKPATQNPRVINYMDEIIAFVSTLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK NP DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVAKSNNYAKLANKTLEDLEIGASGRTDAETERKENPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SWDSPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGK---TARINPAAEDCINKLRDEFHARMSDDLNT 295
+ + D EV L + T ++N A + D F M DD NT
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTEQVNQAE---LQTYLDTFQEAMDDDFNT 355
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
++ +T F D K+INS + +++ +++L++ G++ +
Sbjct: 356 ANGVTVLF-DMAKWINSG-----------------NYDQTVKDAFEKMLQVFGIV----F 393
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
E E+ +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 394 EE-------------EVLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKE 440
Query: 416 ETIW 419
W
Sbjct: 441 GVRW 444
>gi|387762186|ref|YP_006069163.1| cysteinyl-tRNA synthetase [Streptococcus salivarius 57.I]
gi|339292953|gb|AEJ54300.1| cysteinyl-tRNA synthetase [Streptococcus salivarius 57.I]
Length = 440
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 231/424 (54%), Gaps = 58/424 (13%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + LS+++ ++ D L P T PRV ++M++I ++ +++
Sbjct: 66 KIIKAANEAGISTKELSDKFIAAFMEDTGQLGIKPATQNPRVINYMDEIIAFVSTLVDKG 125
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK NP DFALWKAAK G
Sbjct: 126 FAYVSEGDVYFRVAKSNNYAKLANKTLEDLEIGASGRTDAETERKENPLDFALWKAAKEG 185
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SWDSPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 186 EVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 245
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 246 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTVDGQVLRFFLATQQYRKPINFT----- 300
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGK---TARINPAAEDCINKLRDEFHARMSDDLNT 295
+ + D EV L + T ++N A + D F M DD NT
Sbjct: 301 ---------EKAIHDAEVNLKYLKNTHSLPLTEQVNQAE---LQTYLDAFQEAMDDDFNT 348
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
++ +T F D K+INS + +++ +++L++ G++ +
Sbjct: 349 ANGVTVLF-DMAKWINSG-----------------NYDQTVKDAFEKMLQVFGIV----F 386
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
E E+ +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 387 EE-------------EVLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKE 433
Query: 416 ETIW 419
W
Sbjct: 434 GVRW 437
>gi|153940395|ref|YP_001392856.1| cysteinyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
gi|384463817|ref|YP_005676412.1| cysteine--tRNA ligase [Clostridium botulinum F str. 230613]
gi|187629802|sp|A7GJ96.1|SYC_CLOBL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152936291|gb|ABS41789.1| cysteine--tRNA ligase [Clostridium botulinum F str. Langeland]
gi|295320834|gb|ADG01212.1| cysteine--tRNA ligase [Clostridium botulinum F str. 230613]
Length = 465
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 242/420 (57%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L +R+ +EY D DL T PR ++ ME+I ++ +I
Sbjct: 72 KMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEIIKFVSDLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K +YG+LSGQ LE + G R+ +D RK++P DFA+WK+ K GEP+
Sbjct: 132 YAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINIDERKKDPMDFAIWKSQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQSEARTGKQFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +N+S+ LDS
Sbjct: 252 WLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQINFSMELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++ + E L + E + + E + K ++++ +M DD NT+ ++
Sbjct: 312 AALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKMDDDFNTADAIS 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N+++ + K+ + L LI +E+ LG+L + + +
Sbjct: 370 VIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGNPLGILQESTKASLEE 418
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+++ +R + ARK K+++ +D+IR +L +GI L D + W+
Sbjct: 419 EIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIVLEDTPQGVRWK 463
>gi|445370707|ref|ZP_21425909.1| cysteinyl-tRNA ligase [Streptococcus thermophilus MTCC 5460]
gi|445385631|ref|ZP_21427618.1| cysteinyl-tRNA ligase [Streptococcus thermophilus MTCC 5461]
gi|444751595|gb|ELW76317.1| cysteinyl-tRNA ligase [Streptococcus thermophilus MTCC 5461]
gi|444751623|gb|ELW76343.1| cysteinyl-tRNA ligase [Streptococcus thermophilus MTCC 5460]
Length = 447
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 229/421 (54%), Gaps = 52/421 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN++G + LS+++ ++ D A L P T PRV ++M++I ++ +I+
Sbjct: 73 KIIKAANEVGISTKELSDKFITAFMEDTAQLGIKPATQNPRVINYMDEIIAFVSILIDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK +P DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDAETDRKEDPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SW+SPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +N+KMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNKKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + D EV L + ++ + D F A M DD NT++
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQAYLDAFQAAMDDDFNTANG 358
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K+INS +++ +++L++ G+ V
Sbjct: 359 VTVLF-DMAKWINSG-----------------NYDETVKDAFEKILQVFGI--------V 392
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ E +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 393 FEE---------ETLDEDIEKLIEERQAARSNKDFATADRIRDELAAQGIKLLDTKEGVR 443
Query: 419 W 419
W
Sbjct: 444 W 444
>gi|307729279|ref|YP_003906503.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307583814|gb|ADN57212.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 479
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/424 (41%), Positives = 238/424 (56%), Gaps = 40/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE SL++R+ Q D L P +PR +D + Q+ MI ++
Sbjct: 89 KIIRRAVENGETIKSLTDRFIQALHEDADALGIARPDMEPRATDFIPQMLGMIEKLEEKG 148
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV K YG+LSG+ LE+ RAGERVA + K +P DF LWK +KA EP
Sbjct: 149 YAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKEDPLDFVLWKQSKADEP 208
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ WDS +G GRPGWHIECSAM L +FDIHGGG DL FPHHENEIAQS AA
Sbjct: 209 ADTGWDSRYGRGRPGWHIECSAMGCTLLGERFDIHGGGQDLQFPHHENEIAQSEAATGQP 268
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG+V +NEKMSKSL NFFTIR++ +Y +R F+ AHYRSPLNYS + +
Sbjct: 269 FVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAHYRSPLNYSDVHI 328
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A +A+ +Y L+D ++P + AA D F A M+DD NT
Sbjct: 329 DDARNALGRLYTALKD----VTP----------DGAALDWNEAHAQRFQAAMNDDFNTPV 374
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
++ F+ L + + + +L LR + VL +LG P +
Sbjct: 375 AVSVLFE------------LATEVNRTRDPALARQLRSL----GAVLGLLGREPRAYLQQ 418
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKE 416
AL+ A + + I ER AA++ KD++ +D+IRA+L G+AL D G
Sbjct: 419 AAGAAVQGALEPAAIEAK-----IAERVAAKQAKDYAAADRIRAELLEAGVALEDKPGGL 473
Query: 417 TIWR 420
T WR
Sbjct: 474 TEWR 477
>gi|258512691|ref|YP_003186125.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479417|gb|ACV59736.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 474
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 231/423 (54%), Gaps = 31/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA +LG +P L+ + Y D L P T PRV++ +++I I +I+
Sbjct: 74 RIIQRAQELGISPRELAEENIRYYFEDAGKLFIRPATVHPRVTECVDEIIRFIQDLIDRG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY G V+F P YG+LS Q E+ RAG R+ V K +P DFALWKAAK GE
Sbjct: 134 HAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGYRIEVQDEKDDPTDFALWKAAKPGEEW 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWGPGRPGWHIECS M+ YL + DIH GG DLIFPHHENEIAQS A + Y
Sbjct: 194 WPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGGRDLIFPHHENEIAQSEAHSGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + N EKMSKS GNF R + ER P A+R FL+SAHYR+PLNY+ LD A
Sbjct: 254 WLHNGTLNINGEKMSKSTGNFIMARDLLERRDPRAVRFFLLSAHYRNPLNYTEEALDQAE 313
Query: 242 DAVFYIYQTLQDCE---VALSPFQEHGKTARINPA--AEDCINKLRDEFHARMSDDLNTS 296
A+ I + ++D + AL + A P+ + ++R F M DD NT+
Sbjct: 314 QALSRIDRLIRDLDHRAEALKAMRGALDRADEVPSTRGRSDVEQIRSAFIQAMDDDFNTA 373
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ F D ++ +N+ L ++ + LR + E+L +LG+
Sbjct: 374 DGMAAIF-DGVRVVNTRL---------EEGGVTLGDLRLYRDLFVELLGVLGI------- 416
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
K E E+++ +LI ERA ARK +DF+++D+IR L +GI L D
Sbjct: 417 ---------PKKEEERLEDEIERLIAERAEARKRRDFARADEIRDQLRHRGIVLEDTPYG 467
Query: 417 TIW 419
T W
Sbjct: 468 TRW 470
>gi|303327042|ref|ZP_07357484.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|345890980|ref|ZP_08841841.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
gi|302863030|gb|EFL85962.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|345048705|gb|EGW52528.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
Length = 483
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 226/419 (53%), Gaps = 11/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G + ++ Y + DM L L +PR ++++ QI+++ ++I
Sbjct: 72 KIINRANKEGRDWQEVAQTYIDAFHEDMDRLGVLRADLEPRATEYIPQIQELCAKLIAEG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V P YG+LSG+ L+ +G RVA K +P DFALWKAAK GEP
Sbjct: 132 TAYATPSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGEEKEDPLDFALWKAAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECSAMS+ YL DIHGGG DL+FPHHENEIAQS A C+
Sbjct: 192 SWDSPWGKGRPGWHIECSAMSSPYLP--LDIHGGGQDLVFPHHENEIAQSEAVCRCELAR 249
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N EKMSKSLGNF TIR I Y P LR FL+ HYRSP++++ +D A
Sbjct: 250 YWVHNGFVQVNAEKMSKSLGNFKTIRDILGSYLPETLRFFLLGKHYRSPIDFTAEGMDEA 309
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A +Y +L + AL +AE L F A + DDLNT+ L
Sbjct: 310 EKAQHRVYSSLMEARKALERASWKKTPLPAELSAE--WAALPQAFEAALDDDLNTAQALG 367
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F ++ +N L K + + L+E + L + G P E L
Sbjct: 368 QIFSQ-VRIVNRLLEE-KNLRAAESTRDLLEDFLARARDWDAQLGLFGRDP----VEFLT 421
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+L+ R L + V L+ +R R KDF++SD +R +L G+ + D + W
Sbjct: 422 ELRAMRAARKNLDMDRVEDLLRQRREVRMQKDFTRSDALRRELLDLGVNVRDTPEGQAW 480
>gi|440229808|ref|YP_007343601.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
gi|440051513|gb|AGB81416.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
Length = 461
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 224/422 (53%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE L+ R E D L P +PR + H+ +I ++ +++ D
Sbjct: 73 KIIRRAAENGETCDQLTGRMLAEMHADFDALLIERPDQEPRATQHIAEIIEITQRLLERD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+++ P YG LS Q LE +AG RV +D KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSIDSDPQYGLLSRQDLEQLQAGARVEIDDVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDREKMSKSLNNFFTIRDVLGYYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ + A P AR F M DD NT +
Sbjct: 313 RASLERLYTALRGTDPAAQPAGGEAFEAR---------------FREAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F + +N LK + E LRK+ N +LGLL P A+ +
Sbjct: 358 ALFD-----LAREVNRLKSEDMAAANAMAAE-LRKLAN-------VLGLLQQEPEAFLQS 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + E LI++R ARK+K+++ +D R L GI L D + T
Sbjct: 405 GAQADDGEVAEIE-------ALIKQRNDARKSKEWALADAARDRLNEMGIVLEDGPQGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|148381443|ref|YP_001255984.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|153933894|ref|YP_001385818.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|153937063|ref|YP_001389225.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. Hall]
gi|187629799|sp|A7FZ91.1|SYC_CLOB1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629801|sp|A5I7M8.1|SYC_CLOBH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148290927|emb|CAL85063.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|152929938|gb|ABS35438.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|152932977|gb|ABS38476.1| cysteine--tRNA ligase [Clostridium botulinum A str. Hall]
Length = 465
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 242/420 (57%), Gaps = 29/420 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L +R+ +EY D DL T PR ++ ME+I ++ +I
Sbjct: 72 KMIKRANEEGSTVKELGDRFIKEYYKDADDLNIERATKNPRATEFMEEIIKFVSDLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F+ +K +YG+LSGQ LE + G R+ VD RK++P DFA+WK+ K GEP+
Sbjct: 132 YAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDERKKDPMDFAIWKSQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPHHENEIAQSEARTGKQFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H+ V NN+KMSKSL NFFT R+I E+Y LR F++S HYR+ +N+S+ LDS
Sbjct: 252 WLHSAFVNVNNQKMSKSLNNFFTAREILEKYDADVLRMFMLSGHYRTQINFSMELLDSTK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQ-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y ++ + E L + E + + E + K ++++ +M DD NT+ ++
Sbjct: 312 AALDRLYNSINNLENLLDEVKNEELRDEELEYKNE--LQKYKEKYIEKMDDDFNTADAIS 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N+++ + K+ + L LI +E+ LG+L + + +
Sbjct: 370 IIF-DLIRDVNTNVTIESSKELVKYTLDLI----------RELGSPLGILQESTKASLEE 418
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+++ +R + ARK K+++ +D+IR +L +GI L D + W+
Sbjct: 419 EIEKLIEERQK---------------ARKEKNWALADKIRDNLKERGIVLEDTPQGIRWK 463
>gi|418481027|ref|ZP_13050077.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|384571373|gb|EIF01909.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 460
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 239/422 (56%), Gaps = 39/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE SL+ R E D L P +PR ++++ +I +++ ++I
Sbjct: 73 KIIKRANENGETCDSLTERLIGEMHADFDALNMKRPDIEPRATEYIAEIIELVQKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F + K +YG+LS Q LE +AG RV ++S KR+ DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEIAKYDDYGKLSRQDLEQLQAGARVEIESAKRSSLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y P +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLMSGHYRSQLNYSEENLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHARMSDDLNTSHI 298
++ +Y +L+ +++ PAA E+ + + F M+DD NT
Sbjct: 313 RASLERLYTSLRGLDLS-------------TPAAGGEEYVKR----FTEAMNDDFNTPEA 355
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D + IN + K + ++ +L + E+ +V+ IL P
Sbjct: 356 YSVLF-DMAREIN---------RVKTEDIATASALGSLMRELADVIGILHQDPEAF---- 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK + E+ E + LI+ R +R KD++ +D R LT GI L D + T
Sbjct: 402 ---LKGDSGSDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGPEGTT 456
Query: 419 WR 420
WR
Sbjct: 457 WR 458
>gi|421617568|ref|ZP_16058556.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
gi|409780556|gb|EKN60185.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
Length = 461
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/424 (40%), Positives = 230/424 (54%), Gaps = 44/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA++ GE +L R D A L L P +PR +DH+ + MI +I
Sbjct: 74 KIIRRASENGEPFQALVERMIAAMHEDEARLNVLRPDLEPRATDHIAGMHAMIQTLIGKG 133
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ + G R+ VD K +P DF LWK AK GEP
Sbjct: 134 FAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPLDFVLWKGAKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS AA +
Sbjct: 194 SWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATGKQYAN 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYRSP+NYS L A
Sbjct: 254 AWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSPINYSEESLKEA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ L Q G A + + F A M DD N+
Sbjct: 314 KGALERFYNGLK----GLPEAQAAGGEAFV------------ERFGAAMDDDFNSPEACA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ S + + + +K++ +LG+L
Sbjct: 358 VLFE-----MIREVNRLRE--------SDVPAAAGLAARLKQLAGVLGVL---------- 394
Query: 361 QLKDKALKRA----ELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
QL+ +A +A ++ +V LI R AR K++++SD+IR L G+ L D
Sbjct: 395 QLEPEAFLQAGAAGKVDAAEVEALIAARLTARVEKNWAESDRIRDQLAAMGVVLEDGKGG 454
Query: 417 TIWR 420
T WR
Sbjct: 455 TTWR 458
>gi|408481226|ref|ZP_11187445.1| cysteinyl-tRNA ligase [Pseudomonas sp. R81]
Length = 462
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 229/423 (54%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ R D A L L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWKA K GEP
Sbjct: 133 YAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDFVLWKATKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSAINYSEDNLKDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A++P AR F M+DD T
Sbjct: 313 KGALERFYHALKGLP-AVAPAGGEAFVAR---------------FTEVMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ S +++ + +KE+ +LG VLQ
Sbjct: 357 VLFE-----MVREINRLRE--------SDLDAAAGLAARLKELASVLG---------VLQ 394
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
D L+ D Q LI+ R AAR NKD+++SD+IR LT G+ L D T
Sbjct: 395 MEADDFLQAGAEGRVDAAQVDALIQARLAARTNKDWAESDRIRDQLTAMGVVLEDGKGGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|418016970|ref|ZP_12656529.1| cysteinyl-tRNA synthetase [Streptococcus salivarius M18]
gi|345527663|gb|EGX30971.1| cysteinyl-tRNA synthetase [Streptococcus salivarius M18]
Length = 447
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 231/424 (54%), Gaps = 58/424 (13%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + LS+++ ++ D L P T PRV ++M++I ++ +++
Sbjct: 73 KIIKAANEAGISTKELSDKFIVAFMEDTGQLGIKPATQNPRVINYMDEIIAFVSTLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK NP DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVAKSNNYAKLANKTLEDLEIGASGRTDAETERKENPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SWDSPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGK---TARINPAAEDCINKLRDEFHARMSDDLNT 295
+ + D EV L + T ++N A + D F M DD NT
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTEQVNQAE---LQTYLDAFQEAMDDDFNT 355
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
++ +T F D K+INS + +++ +++L++ G++ +
Sbjct: 356 ANGVTVLF-DMAKWINSG-----------------NYDQTVKDAFEKMLQVFGIV----F 393
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
E E+ +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 394 EE-------------EVLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKE 440
Query: 416 ETIW 419
W
Sbjct: 441 GVRW 444
>gi|68248628|ref|YP_247740.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|319896490|ref|YP_004134683.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
gi|81336945|sp|Q4QPG7.1|SYC_HAEI8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68056827|gb|AAX87080.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|317431992|emb|CBY80340.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
Length = 459
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 233/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R QE D L L P ++PR + H+ +I +++ ++I
Sbjct: 73 KIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEIIEIVEKLIKRG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q LE +AG R+ ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y+ A+R+FL++AHYRS LNYS L+ A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLLTAHYRSQLNYSEENLNLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F E+ + R+ M DD NT + L+
Sbjct: 313 QGALERLYTALRGTDQSAVVF-----------GGENFVETFREA----MDDDFNTPNALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N LK + E + ++E+ ILGL LQ
Sbjct: 358 VLFEMA-----REINKLKTEDA--------EKANGLAARLRELGAILGL---------LQ 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q +K L+ +E + LI++R AR KD++ +D R +L GI L D T
Sbjct: 396 QDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWATADAARNELIAMGIVLEDGPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|421451477|ref|ZP_15900838.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius K12]
gi|400181908|gb|EJO16170.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius K12]
Length = 447
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 231/424 (54%), Gaps = 58/424 (13%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + LS+++ ++ D L P T PRV ++M++I ++ +++
Sbjct: 73 KIIKAANEAGISTKELSDKFIAAFMEDTGQLGIKPATQNPRVINYMDEIIAFVSTLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK NP DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVAKSNNYAKLANKTLEDLEIGASGRTDAETERKENPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SWDSPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGK---TARINPAAEDCINKLRDEFHARMSDDLNT 295
+ + D EV L + T ++N A + D F M DD NT
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTEQVNQAE---LQTYLDTFQEAMDDDFNT 355
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
++ +T F D K+INS + +++ +++L++ G++ +
Sbjct: 356 ANGVTVLF-DMAKWINSG-----------------NYDQTVKDVFEKMLQVFGIV----F 393
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
E E+ +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 394 EE-------------EVLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKE 440
Query: 416 ETIW 419
W
Sbjct: 441 GVRW 444
>gi|167765721|ref|ZP_02437774.1| hypothetical protein CLOSS21_00209 [Clostridium sp. SS2/1]
gi|167712594|gb|EDS23173.1| cysteine--tRNA ligase [Clostridium sp. SS2/1]
gi|291559857|emb|CBL38657.1| cysteinyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
Length = 467
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 236/421 (56%), Gaps = 31/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G ++ RY +E DM L P T+QPR ++ + + MI +I
Sbjct: 72 KIIKKANEEGVTATEIAERYIKECKQDMEALNIKPATHQPRATEEIGGMIKMIQTLIKKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY V+G V+F +YG+LS + +++ AG R V + K +P DF LWK K G
Sbjct: 132 HAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTGEEGKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E +WDSPWG GRPGWHIECS MS Y+ DIH GG DLIFPHHENEIAQS A +
Sbjct: 192 EIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLIFPHHENEIAQSEACNGEKF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG + NN+KMSKS GNFFT+R+I E+Y +R F++SAHYR+PLN+S ++
Sbjct: 252 ANYWMHNGFLNINNKKMSKSAGNFFTVREIGEKYPLQVIRFFMLSAHYRTPLNFSDTLVE 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
SA + I + C +S +E G ++ I L +F M DD NT+
Sbjct: 312 SAKTGLDRILTAIDLCR-EMSAKEETGSLSKEETEHFANIEVLVKKFEDAMEDDFNTADA 370
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ ++++ + S + +KI ++++ +LG+
Sbjct: 371 VSAIFE-----------IVRESNSTVKDFSA-DYAKKILKVLEDLCSVLGI--------- 409
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ K E+ +E++ +LIEER AARKNKDF+++D+IR L +GI L D +
Sbjct: 410 ------ETTKEEEILDEEIEKLIEERQAARKNKDFARADEIRDQLLEQGIVLKDTREGVK 463
Query: 419 W 419
W
Sbjct: 464 W 464
>gi|386333865|ref|YP_006030036.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
gi|334196315|gb|AEG69500.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
Length = 465
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 239/430 (55%), Gaps = 52/430 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE +L++R+ D L P ++PR ++++ Q+ MI ++ N
Sbjct: 75 KIIRRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYVPQMLSMIGKLQANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV + P YG+LSG+ LE+ RAGERVA + K++P DF LWK+AKA EP
Sbjct: 135 LAYQAADGDVNYAVRRFPGYGKLSGKSLEDLRAGERVAANDAKQDPLDFVLWKSAKADEP 194
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ W SPWG GRPGWHIECSAMS L + FD+HGGG DL FPHHENEIAQ+ A +
Sbjct: 195 AESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQFPHHENEIAQAEGANGST 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y P +R F++ +HYRS LNYS L
Sbjct: 255 FVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRFFILRSHYRSDLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQD--CEVALSP--FQEHGKTARINPAAEDCINKLRDEFHARMSDDL 293
D A A+ +Y L+D E P + HG+ F M+DD
Sbjct: 315 DDARHALTRLYTALKDVPAEAGAQPDWSEPHGQ-----------------RFREAMNDDF 357
Query: 294 NTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP-- 351
NT + F+ + S +N K + P + +++ + ++GLL
Sbjct: 358 NTPVAMAVLFE-----LASEVN--KTRSP------------ALASQLAALGGVMGLLGRD 398
Query: 352 PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
P A+ + L AE+ IE R A+ +DF+++D IRADL GI L
Sbjct: 399 PHAFLQGGVGAAADGLDTAEVEAR-----IEARRVAKAARDFARADGIRADLLAAGIVLE 453
Query: 412 DM-GKETIWR 420
D G T WR
Sbjct: 454 DKPGGVTEWR 463
>gi|418028429|ref|ZP_12666995.1| Cysteine--tRNA ligase [Streptococcus thermophilus CNCM I-1630]
gi|354687259|gb|EHE87359.1| Cysteine--tRNA ligase [Streptococcus thermophilus CNCM I-1630]
Length = 447
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 229/421 (54%), Gaps = 52/421 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN++G + LS+++ ++ D A L P T PRV ++M++I ++ +I+
Sbjct: 73 KIIKAANEVGISTKELSDKFITAFMEDTAQLGIKPATQNPRVINYMDEIIAFVSILIDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDS---RKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ G D+ RK +P DFALWKAAK G
Sbjct: 133 FAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDAETDRKEDPLDFALWKAAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SW+SPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +N+KMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNKKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + D EV L + ++ + D F A M DD NT++
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQAYLDAFQAAMDDDFNTANG 358
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K+INS +++ +++L++ G+ V
Sbjct: 359 VTVLF-DMAKWINSG-----------------NYDETVKDAFEKILQVFGI--------V 392
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
++ E +ED+ +LIEER AAR NKDF+ +D+IR +L +GI L+D +
Sbjct: 393 FEE---------ETLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVR 443
Query: 419 W 419
W
Sbjct: 444 W 444
>gi|431927424|ref|YP_007240458.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
gi|431825711|gb|AGA86828.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
Length = 462
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 229/424 (54%), Gaps = 44/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE +L R D L L P +PR +DH+ + MI +I+
Sbjct: 75 KIIRRAGENGEPFQALVERMIAAMHEDETRLDVLRPDIEPRATDHIAGMHQMIQTLIDKG 134
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ + G R+ VD K++P DF LWK AK GEP
Sbjct: 135 FAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKQDPLDFVLWKGAKPGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS AA +
Sbjct: 195 SWSSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATGKQYAN 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYRSP+NYS L A
Sbjct: 255 AWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSPINYSEDSLREA 314
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ + PA D + F M DD N+
Sbjct: 315 KSALERFYNGLKGL-------------PNVAPAGGD---EFVARFATAMDDDFNSPEACA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ +N L++ P + ++ +KE+ +LG+L
Sbjct: 359 VLF-DMIR----EVNRLRESDPT--------AAAQLAARLKELASVLGVL---------- 395
Query: 361 QLKDKALKRA----ELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
QL+ +A +A ++ +V LI R AR K++++SD+IR LT G+ L D
Sbjct: 396 QLEPEAFLQAGAAGKVDAAEVEALIAARLTARAEKNWAESDRIRDQLTAMGVVLEDGKGG 455
Query: 417 TIWR 420
T WR
Sbjct: 456 TTWR 459
>gi|291543500|emb|CBL16609.1| cysteinyl-tRNA synthetase [Ruminococcus champanellensis 18P13]
Length = 464
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 230/409 (56%), Gaps = 28/409 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G + ++ +Y EY D L + P+V+ M+ I D + ++++
Sbjct: 72 KIIKRANEEGSSAAQVAEKYIAEYKTDAHGLNVMDADVHPQVTTCMQDIIDFVKALVDSG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F P YG+LS +E+ +AG R+ VD RK + DFA+WKAAK GEP
Sbjct: 132 HAYEADGDVYFRTASFPEYGKLSKNSMEDLQAGARIGVDERKESALDFAVWKAAKPGEPY 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAMS YL DIH GG DLIFPHHENEIAQS + +
Sbjct: 192 WDSPWGKGRPGWHIECSAMSRKYLGDTLDIHCGGQDLIFPHHENEIAQSESVTGKPLANL 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +N+KMSKSLGNFFT R++ E+Y +R+ ++ AHYRSP+NY V LD+
Sbjct: 252 WMHNGYINVDNKKMSKSLGNFFTAREVAEKYGYEVVRYMMVQAHYRSPINYCVELLDACK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++ +Y C L + +P + ++ + F M DDLNT+ ++
Sbjct: 312 ASLERLYT----CRDTLDRAIANAPAGAADPDSLALFDQRKQAFITAMDDDLNTADGVSV 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D ++ +N+ N P + +L R + E+ +LGLL Y+
Sbjct: 368 LF-DLVRDLNTRSN-----DPATTKDTLTAGARLFD----ELTGVLGLL----YNR---- 409
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
K+ V +L++ R ARK KDF+++D++R ++ G A+
Sbjct: 410 ------KQGNEIPAQVQELVDARTVARKAKDFAEADRLRDEIAALGYAV 452
>gi|425738224|ref|ZP_18856490.1| cysteinyl-tRNA ligase [Staphylococcus massiliensis S46]
gi|425480234|gb|EKU47402.1| cysteinyl-tRNA ligase [Staphylococcus massiliensis S46]
Length = 467
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 238/411 (57%), Gaps = 27/411 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+R+N+LGE+ ++ RY + + D L T PRV DHM+ I D I ++++
Sbjct: 73 KLIKRSNELGESVPDIAERYIKAFYEDTGALHVKKATSNPRVMDHMDNIIDFIKELVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F K YG+LS Q +++ + G R+ +K + DF LWK AK GE S
Sbjct: 133 YAYESGGDVYFRTRKFDGYGKLSHQSIDDLKVGARIETGEQKEDALDFTLWKKAKPGEIS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSP+G GRPGWHIECS M+ H L DIH GG DL FPHHENEIAQS A ++ +Y
Sbjct: 193 WDSPFGEGRPGWHIECSVMAYHELGPTIDIHAGGSDLQFPHHENEIAQSEAHNCETFANY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + NNEKMSKSLGNF + I + P LR F+IS HYRSP+NY++ +D+A
Sbjct: 253 WMHNGFININNEKMSKSLGNFILVHDIIKEIDPDVLRFFMISVHYRSPINYNLELVDAAR 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + +++ AL E + + A +D +++ +F M+DD NT++ +T
Sbjct: 313 SGL----ERIRNSYEALRTRLETSVDIKSHDAHKDEADQILAQFEKVMNDDFNTANAIT- 367
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
A+ D K N + +Q + ++ L+++ EV E++ S+VL
Sbjct: 368 AWYDLAKLSN---------KYNLEQSTSVDVLKRL-MEVHEII-----------SDVLGV 406
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+KA K EL +E++ LIEER AR+ K+F ++D+IR L K I L D
Sbjct: 407 PLEKASKE-ELLDEEIEALIEERNEARQQKNFERADEIRDLLKEKNIILED 456
>gi|359298707|ref|ZP_09184546.1| cysteinyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304648|ref|ZP_10823714.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
gi|400377443|gb|EJP30320.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
Length = 459
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 230/422 (54%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E +L R E D DL L P +PR + H+ +I M+ ++I
Sbjct: 73 KIIKRALENNETCDALVERMIAEMHKDFDDLNILRPDVEPRATQHIPEIIAMVEKLIAKG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F VE YG LS Q L +AG RV + S K+NP DF LWK +K EP
Sbjct: 133 HAYVAADGDVMFDVESFSQYGALSRQNLAQLQAGARVEIKSVKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM++ L FDIHGGG DL+FPHHENEIAQSC A V+
Sbjct: 193 SWESPWGNGRPGWHIECSAMNSQELGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGEYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T + EKMSKSLGNFF+IR + Y +LR+F ++AHYRS L+YSV LD A
Sbjct: 253 YWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFLTAHYRSLLDYSVDNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ C++ ++P E I+ F M+DD NT L
Sbjct: 313 RSALERLYTALRGCDLTVAP-----------AGGEQYISA----FETAMNDDFNTPGALA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ I +N LK + P Q + +K + +LGL L+
Sbjct: 358 VLFE-----IAREVNKLKAEDPAQAN--------GLAVRLKALAGVLGL---------LE 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + LK +E ++ LI +R A+ K+++ +D++R L I L D T
Sbjct: 396 QDPESFLKGESNADEAAEIEALIAKRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|308070997|ref|YP_003872602.1| cysteinyl-tRNA synthetase [Paenibacillus polymyxa E681]
gi|305860276|gb|ADM72064.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Paenibacillus
polymyxa E681]
Length = 467
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/419 (37%), Positives = 239/419 (57%), Gaps = 27/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+A +L + +++ ++ Y D+A L + PRV++ M+ I D I ++++
Sbjct: 74 KLIRKARELDMDVSAVAEKFIAAYYEDLAGLNVPAASMNPRVTESMDLIIDFIKELVDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDVF+ +K +YG+LSGQ LE + G R+ VD RK N DF LWKAAK GE
Sbjct: 134 YAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRINVDERKENAEDFVLWKAAKPGEIH 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM+ HYL DIHGGG DL FPHHE E AQS Y
Sbjct: 194 WSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPHHECECAQSEVITGKPLSRY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGN ++ + + P ALR+F++S HYR+PLNY+ + A
Sbjct: 254 WMHNGYIRIDNEKMSKSLGNGILVKDLRAHHKPEALRYFMLSTHYRNPLNYNQETMSQAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++V I + + + L+ E ++ + ++ + +F +M+DD NT +T
Sbjct: 314 NSVERIANAVANVKHRLANALE--GNGEVSTELQTKLDGILQQFGEKMNDDFNTPDAITA 371
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F +++ + ++L++ Q +L +++ + + VLRI YSE
Sbjct: 372 VFD----WVSEANHLLQRDVVHQAEL---QAVLHTFHSMNSVLRI--------YSE---- 412
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
EL ++++ QLI ER ARK K++S++D+IR L KGI L D + WR
Sbjct: 413 ------PSEELLDDEIEQLIAERVEARKTKNWSRADEIRDLLAAKGIVLEDTAQGMRWR 465
>gi|410635575|ref|ZP_11346184.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
gi|410144873|dbj|GAC13389.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
Length = 458
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/424 (41%), Positives = 223/424 (52%), Gaps = 45/424 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN GE L+ R D A + L P +PRV+ H+ +I D+I ++I+
Sbjct: 73 KIIQRANQNGETAEQLTQRTIALMHEDFAAINLLEPDIEPRVTTHIPEIIDVIQRLISKG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV F V YG+LS Q LE AGERV V S K +P DF LWK K GEP
Sbjct: 133 HAYQAPSGDVLFDVSTYDQYGKLSKQDLEQLNAGERVEVSSDKTDPLDFVLWKTVKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAM++ +L + FDIHGGG DLIFPHHENE+AQSC A V+
Sbjct: 193 YWESPWGEGRPGWHIECSAMNSKHLGTHFDIHGGGSDLIFPHHENEVAQSCCAFDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G V + EKMSKSLGNFFT+R + + Y LR+FL+SAHYRS L+YS + A
Sbjct: 253 YWIHTGMVQVDQEKMSKSLGNFFTLRDVLKDYDAETLRYFLMSAHYRSQLSYSEENIKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+D + + G + F + M DD NT
Sbjct: 313 KSALERLYTALRDSQPNFDVDMQQGDYLQ--------------RFESAMDDDFNTPEAFA 358
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D +K IN K Q++ L L K+ ILG L
Sbjct: 359 VMF-DLVKDIN--------KSHGQEKSDLAGILLKLG-------AILGFL---------- 392
Query: 361 QLKDKALKRAELTEEDVLQLIE----ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
QL A + + E D + +IE R AR +KD+ +D R LT G+ L D
Sbjct: 393 QLDPNAYLQGGIVESDEVSVIEGLIKARNDARADKDWIAADAARDALTAMGVVLEDGANG 452
Query: 417 TIWR 420
T WR
Sbjct: 453 TTWR 456
>gi|419706820|ref|ZP_14234329.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius PS4]
gi|383283455|gb|EIC81410.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius PS4]
Length = 447
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 226/421 (53%), Gaps = 52/421 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+ G + LS+++ ++ D A L P T PRV ++M++I ++ +++
Sbjct: 73 KIIKAANEAGISTKELSDKFIAAFMEDTAQLGIKPATQNPRVINYMDEIIAFVSTLVDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLEN---NRAGERVAVDSRKRNPADFALWKAAKAG 118
AYV EGDV+F V KS NY +L+ + LE+ +G A +RK NP DFALWK AK G
Sbjct: 133 FAYVSEGDVYFRVAKSKNYAKLANKTLEDLEIGASGRTDAETARKENPLDFALWKTAKEG 192
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E SWDSPWGPGRPGWHIECS M+ L DIHGGG DL FPHH NEIAQS A +
Sbjct: 193 EISWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG V +NEKMSKSLGNF T+ + + LR FL + YR P+N++
Sbjct: 253 ANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFT----- 307
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + D EV L + + + + D F M DD NT++
Sbjct: 308 ---------EKAIHDAEVNLKYLKNTHSLPLTDQVDQAELQTYLDAFQEAMDDDFNTANG 358
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T F D K+INS + +++ +++L++ G++
Sbjct: 359 VTVLF-DMAKWINSG-----------------HYDQTVKDAFEKMLQVFGIVF------- 393
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ E+ +ED+ +LIEER AAR NKDF +D+IR +L +GI L+D
Sbjct: 394 ----------KEEVLDEDIEKLIEERQAARANKDFVTADRIRDELAAQGIKLLDTKDGVR 443
Query: 419 W 419
W
Sbjct: 444 W 444
>gi|317497616|ref|ZP_07955934.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895175|gb|EFV17339.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 467
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 237/421 (56%), Gaps = 31/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G ++ RY +E DM L P T+QPR ++ + + MI +I
Sbjct: 72 KIIKKANEEGVTATEIAERYIKECKQDMEALNIKPATHQPRATEEIGGMIKMIQTLIKKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY V+G V+F +YG+LS + +++ AG R V + K++P DF LWK K G
Sbjct: 132 HAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTGEEGKKDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E +WDSPWG GRPGWHIECS MS Y+ DIH GG DLIFPHHENEIAQS A +
Sbjct: 192 EIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLIFPHHENEIAQSEACNGEKF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG + NN+KMSKS GNFFT+R+I E+Y +R F++SAHYR+PLN+S ++
Sbjct: 252 ANYWMHNGFLNINNKKMSKSAGNFFTVREIGEKYPLQVIRFFMLSAHYRTPLNFSDTLVE 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
SA + I + C ++ +E G ++ I L +F M DD NT+
Sbjct: 312 SAKTGLDRILTAIDLCR-EMAAKEETGSLSKEETEHFANIEVLVKKFEDAMEDDFNTADA 370
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ ++++ + S + +KI ++++ +LG+
Sbjct: 371 VSAIFE-----------IVRESNSTVKDFSA-DYAKKILKVLEDLCSVLGI--------- 409
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ K E+ +E++ +LIEER AARKNKDF+++D+IR L +GI L D +
Sbjct: 410 ------ETTKEEEILDEEIEKLIEERQAARKNKDFARADEIRDQLLEQGIVLKDTREGVK 463
Query: 419 W 419
W
Sbjct: 464 W 464
>gi|238791509|ref|ZP_04635147.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
gi|238729125|gb|EEQ20641.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
Length = 461
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 226/422 (53%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ L+ R E D L P +PR + H+ +I + ++I D
Sbjct: 73 KIIKRALENNESCEQLTTRMLAEMHKDFDALNLKRPDLEPRATHHIPEIIALTERLIARD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWASPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ G A PA + F A M DD NT +
Sbjct: 313 RASLERLYTALR------------GTDANATPAGG---AEFEARFRAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F I +N LK + I + + E++++ +LGLL P + +
Sbjct: 358 ALFD-----IAREVNRLKTED--------ITAANGLAAELRKLAHVLGLLEQDPELFLQS 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + + E LI++R AR +KD++ +D R L GI L D + TI
Sbjct: 405 GAQTNDDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTI 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|392373606|ref|YP_003205439.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Candidatus Methylomirabilis oxyfera]
gi|258591299|emb|CBE67598.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Candidatus Methylomirabilis oxyfera]
Length = 530
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/454 (37%), Positives = 240/454 (52%), Gaps = 37/454 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA +LG++ SL + Y DM L PT +PR + H+ ++ ++I ++
Sbjct: 74 KIIQRAAELGQSRESLVEEQIEAYRRDMDALGLRTPTEEPRATRHIREMIEIIRTLMAKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F V +S +YG+LS + L+ +AG RV VD RKR+P DFALWKA++ GEP+
Sbjct: 134 VAYSVDGDVYFEVRRSSDYGKLSHRGLDELQAGARVEVDPRKRDPLDFALWKASRPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWGPGRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS A Y
Sbjct: 194 WESPWGPGRPGWHIECSAMSMKYLGETFDIHGGGADLIFPHHENEIAQSECATGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG V EKMSKSLGN TIR++ R P A + FL+ HYR+P+ +S L SA+
Sbjct: 254 WIHNGFVNIRAEKMSKSLGNILTIRELLGRISPCAFKLFLLGTHYRAPVEFSEDALISAT 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINP-AAEDCINKLRDEFHARMSDDLNTSHILT 300
A + L++ + +R++ I + E+ M DD NT L
Sbjct: 314 AAAARFHTVLEEVQRFQDVQGSKADRSRMDSLPLSGQIREAEQEYTDAMDDDFNTPRALA 373
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLI-------ESLRKIENEV-------KEVLRI 346
F + +N+ + + SL+ E+LR + + + +EV+
Sbjct: 374 ALFN-----LTKGVNVALRDVDGAPEPSLVYGLSMAGETLRTLGSVLGGLFEGPREVVDR 428
Query: 347 LGLLP------PGAYSEVLQQLKDKALKRAELTE-----------EDVLQLIEERAAARK 389
L + P G + VL+ D K E E E + ++ RA R
Sbjct: 429 LIMTPSAGTSTSGTAASVLRITGDDYCKAREAVESAMASGHTPPTEAIRTIVAYRALCRD 488
Query: 390 NKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 423
KD++ +D IR LT G+ + D G W V
Sbjct: 489 RKDWTTADAIRTWLTNLGVVVDDTGDGVRWYVAV 522
>gi|323494384|ref|ZP_08099494.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
gi|323311367|gb|EGA64521.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
Length = 460
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 239/422 (56%), Gaps = 39/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++ + +I +++ ++I
Sbjct: 73 KIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEIIELVEKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF LWK +K GEP
Sbjct: 133 FAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLNHYDSETVRYFLMSGHYRSQLNYSEENLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHARMSDDLNTSHI 298
++ +Y +L+ ++ PAA E+ +++ F M+DD NT
Sbjct: 313 RASLERLYTSLRGLDLT-------------TPAAGGEEYVSR----FTEAMNDDFNTPEA 355
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D + IN + K + ++ +L + E+ +V+ IL Y +
Sbjct: 356 YSVLF-DMAREIN---------RIKAEDIAAASALGSLMRELADVIGIL-------YQDP 398
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK A E+ E + LI+ R +R +KD++ +D R L GI L D + T
Sbjct: 399 EAFLKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNEMGIVLEDGPEGTT 456
Query: 419 WR 420
WR
Sbjct: 457 WR 458
>gi|317047240|ref|YP_004114888.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
gi|316948857|gb|ADU68332.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
Length = 461
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 231/420 (55%), Gaps = 34/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ +L+NR E D A L LPP +PR + H+++I +++ ++I
Sbjct: 73 KIIKRANENGESIETLTNRMIGEMHKDFAALGILPPDLEPRATRHIDEIIELVGRLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V +YG LS Q LE +AG RV V KRNP DF LWK +KA EP
Sbjct: 133 HAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAEVKRNPMDFVLWKMSKADEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENE+AQS A V+
Sbjct: 193 AWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEVAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS LNY L+ A
Sbjct: 253 YWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLMSGHYRSQLNYGEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ H + + E+ F M DD NT +
Sbjct: 313 RAALERLYTALR-----------HTDVSAVAAGGEE----FEARFRTAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N L K + K +L LR++ EVL IL P + +
Sbjct: 358 VLFDMA-----REVNRL-KTEDKTAADALAAKLRQL----AEVLGILQ-QDPEQFLQSGA 406
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q D + E LI+ R AR+ KD++++D R L GI L D + T WR
Sbjct: 407 QANDDEVAEIE-------ALIKMRNDARQAKDWAQADVARDKLNALGIVLEDGPQGTTWR 459
>gi|28212192|ref|NP_783136.1| cysteinyl-tRNA synthetase [Clostridium tetani E88]
gi|61216342|sp|Q890M4.1|SYC_CLOTE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|28204636|gb|AAO37073.1| cysteinyl-tRNA synthetase [Clostridium tetani E88]
Length = 465
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 234/422 (55%), Gaps = 33/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAND G L R+ EY D L T PR ++ ME+I + ++++
Sbjct: 72 KMIKRANDEGITVKELGERFIGEYYKDADSLNIERATVNPRATEFMEEIIQFVKELVDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY ++GDV+F ++ YG+LSGQ +E+ +AG R+ VD RK++ DFA+WK K GEP+
Sbjct: 132 YAYEIDGDVYFHTKRFNEYGKLSGQNIEDLQAGARINVDERKKDAMDFAIWKKQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ + L DIH GG DLIFPHHENEIAQS Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAHNLLGDTIDIHAGGHDLIFPHHENEIAQSECRTGKPFAKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMH+ + +N+KMSKSL NFFT R+I E+Y +R F++SAHYR+ LN+S L SA
Sbjct: 252 WMHSAFLNIDNKKMSKSLNNFFTAREILEKYDADVVRLFMLSAHYRAQLNFSEELLQSAM 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKL---RDEFHARMSDDLNTSHI 298
AV +Y + + E K +N + I KL R+++ +M DD NT+
Sbjct: 312 SAVERLYNAIYNLE----NLANEVKRNDLNEEEKKYIKKLDEYREKYIEKMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D ++ INS++ K+ + LS+I +E+ LG+L
Sbjct: 368 IAVIF-DMIRDINSNVKSDSSKKIIEYALSII----------RELGSPLGILQKST---- 412
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
E E+++ QLI+ R AR K+++ +D+IR L +GI L D +
Sbjct: 413 -----------EESVEDEIQQLIDRREKARTEKNWALADEIRDGLKERGILLEDTPQGVR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|284006809|emb|CBA72076.1| cysteinyl-tRNA synthetase [Arsenophonus nasoniae]
Length = 504
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 233/420 (55%), Gaps = 32/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E +L++R E D L L P ++P + H+++I + +++
Sbjct: 114 KIIKRAAENNETCDALTSRMLIEMYKDFDALNILRPDFEPNATHHIKEIIALTERLLKRG 173
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ + GDV FA+ P+YG LS Q LE +AG RV V KRNP DF LWK +K EP
Sbjct: 174 HAYIADNGDVMFAINSDPDYGLLSRQDLEQLQAGARVEVADVKRNPLDFVLWKMSKPNEP 233
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 234 SWSSPWGDGRPGWHIECSAMNGKQLGEHFDIHGGGADLMFPHHENEIAQSTCANDGPYVN 293
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNY+ L A
Sbjct: 294 YWMHTGMVMVDREKMSKSLNNFFTIRDVLAHYDAETVRYFLLSGHYRSQLNYTEENLKQA 353
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+D + H K+ A++ I K R F A M+DD NT +
Sbjct: 354 RTSLERLYTALRDTDA------NHVKS------ADNEIFKQR--FMAAMNDDFNTPEAYS 399
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK L LR++ N ILGLL E
Sbjct: 400 VLFDLA-----REINRLKVDDMAMAN-ELAVQLRQLAN-------ILGLLTQN--PEQFL 444
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q + + AE+ E + LI++R ARKNK ++++D R +LTR GI L D + T+WR
Sbjct: 445 QSRAQVSHSAEI--EKIEALIKQRNDARKNKFWAQADSARDELTRMGIILEDSPQGTVWR 502
>gi|254168458|ref|ZP_04875302.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|197622513|gb|EDY35084.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
Length = 455
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/421 (39%), Positives = 238/421 (56%), Gaps = 43/421 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN+LG++P+ +++ Y +EYL DM L+ P+ + H+E+I ++I +++
Sbjct: 72 KIINKANELGKDPIEMAHYYAREYLKDMDALRVRRANIIPKATRHIEEIINLIKTLVDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F+V+K +YG+LS +++E+ AG RV V+ +KR+P DFALWKA+K GEPS
Sbjct: 132 YAYESGGDVYFSVKKFKDYGKLSHRKIEDMVAGARVEVNEKKRDPLDFALWKASKPGEPS 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAMS +YL DIHGGG DLIFPHHENEIAQS AA Y
Sbjct: 192 WQSPWGSGRPGWHIECSAMSMNYLGPTLDIHGGGADLIFPHHENEIAQSEAATGKPFSKY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA- 240
WMH G V EKMSKS+GN F I+ ++Y LR +++HYR P ++S ++ A
Sbjct: 252 WMHVGLVRFEKEKMSKSIGNVFLIKDFLKKYPAEVLRLMYLNSHYRKPYDFSEKNIEEAL 311
Query: 241 --SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ ++ YQ L++ + P +E E I R + A + DD NT
Sbjct: 312 PLLEKIWSTYQILKNSAMQEGPSEE----------VEKRIEDSRKKIIASLEDDFNTRE- 360
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
A ++ L FIN + ++L ++L + N +KE+ I +LP G
Sbjct: 361 ---AMKEYLSFINFA-----------RELKGGDALAAL-NFLKEMDEIFDILPRG----- 400
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
D K EL E L+ R RK K++ +D IR +L + GI + D + T
Sbjct: 401 -----DNEGKERELIE----LLLNVRNEERKRKNYEIADYIRNELEKIGIKIEDTKEGTK 451
Query: 419 W 419
W
Sbjct: 452 W 452
>gi|392541321|ref|ZP_10288458.1| cysteinyl-tRNA synthetase [Pseudoalteromonas piscicida JCM 20779]
Length = 459
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/426 (40%), Positives = 233/426 (54%), Gaps = 48/426 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ L+ R + D L LP +P V+ HM++I +MI ++I
Sbjct: 73 KIIKRAAENNESINDLTVRMTKAMHEDFTALNMLPADIEPTVTGHMDEIIEMIARLIEKG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F V YG+LS Q LE +AG RV V K +P DF LWK AKAGEP
Sbjct: 133 HAYVAKDGDVLFDVSTFEQYGQLSQQDLEMLQAGARVEVAQDKDDPLDFVLWKKAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 AWQSPWGEGRPGWHIECSAMSSKHLGEFFDIHGGGSDLQFPHHENEIAQSCCANNGRYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
W+H G V N EKMSKSLGNFFT+R++ + + +R+FLI+ HYRS LNYS L+ A
Sbjct: 253 TWIHTGMVQVNKEKMSKSLGNFFTVREVLKAFDRETVRYFLINGHYRSQLNYSQENLEQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ IY L+ E L + G N + F M+DD NT L
Sbjct: 313 RSSLERIYTALRGVE--LVEIELKG-------------NAYAERFETAMNDDFNTPEALP 357
Query: 301 GAFQDALKFINSSLNMLKKKQPK---QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
F+ ++ +N LK K + L+ ++ ILG
Sbjct: 358 VIFE-----LSKEVNRLKDSDAKAAGEHAFILV-----------KLAEILG--------- 392
Query: 358 VLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ Q ++ + E +++V Q LIE+R +AR+NKD++ +D+ R LT G+ L D
Sbjct: 393 -IAQQDPESFLQGEQDDDEVAQIEALIEKRRSARENKDWAAADEARDALTALGVVLEDSA 451
Query: 415 KETIWR 420
+T WR
Sbjct: 452 GKTTWR 457
>gi|333925975|ref|YP_004499554.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333930928|ref|YP_004504506.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|386327799|ref|YP_006023969.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
gi|333472535|gb|AEF44245.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|333490035|gb|AEF49197.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333960132|gb|AEG26905.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
Length = 461
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 228/422 (54%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ L+ R E D L P +PR + H+ +I ++ ++I+ D
Sbjct: 73 KIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEIIEITQRLIDRD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G A PA + F M DD NT +
Sbjct: 313 RTALERLYTALR------------GTDANAQPAGGEAFEA---RFREAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F + +N LK + + + + E++++ ++LGLL P + +
Sbjct: 358 ALFD-----LARDVNRLKGED--------MAAANGLAAELRKLAKVLGLLQQEPEQFLQS 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D AE+ E + LI++R ARK KD++ +D R L I L D + T
Sbjct: 405 GAQADD-----AEVAE--IEALIKQRNDARKAKDWALADAARDRLNEMSIVLEDGPQGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|261820651|ref|YP_003258757.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|261604664|gb|ACX87150.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|385870832|gb|AFI89352.1| Cysteinyl-tRNA synthetase [Pectobacterium sp. SCC3193]
Length = 461
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 230/426 (53%), Gaps = 46/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+ R E D L + P +PR + H+ I +M+ +I
Sbjct: 73 KIIKRAIENGETSDQLTTRMIAEMHADFDALNIVHPDAEPRATHHIADIIEMVETLIARR 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V+ +P YG LS Q L+ +AG RV + + KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSVDTAPGYGALSRQDLDQLQAGARVEITAVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 HWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSRCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTS 296
A+ +Y L+ +++++ HG DEF AR M DD NT
Sbjct: 313 RAALERLYIALRGTDLSVAA---HGG----------------DEFEARFREAMDDDFNTP 353
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGA 354
+ F A +N LK + Q L +LRK+ +LGLL P
Sbjct: 354 EAYSVLFDMA-----REVNRLKAEDV-QAANQLASALRKLSG-------VLGLLEQDPEQ 400
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ + Q+ + +K E LI++R AR KD++ +DQ R L GI L D
Sbjct: 401 FLQNGAQVDNDEVKEIE-------ALIQQRKDARAAKDWALADQARDRLNEMGIVLEDGP 453
Query: 415 KETIWR 420
+ TIWR
Sbjct: 454 QGTIWR 459
>gi|291546868|emb|CBL19976.1| cysteinyl-tRNA synthetase [Ruminococcus sp. SR1/5]
Length = 469
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/430 (39%), Positives = 245/430 (56%), Gaps = 45/430 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++A + G + +S RY +E DMAD+ P T P+ + ++ + DMI +I+
Sbjct: 72 KIIKKAIEEGVSAEEISTRYIKECKKDMADMNVKPATTAPQATQEIQGMIDMIQTLIDKG 131
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKA 117
AY +G V+F V+K YG+LS + L++ ++G R V+ + +K +P DF LWK K
Sbjct: 132 YAYPAADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLKVSGEDQKEDPLDFVLWKPKKE 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEPSW SPW GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQS
Sbjct: 192 GEPSWPSPWCDGRPGWHIECSVMSKKYLGEEIDIHAGGEDLIFPHHENEIAQSECCNGKI 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
YWMHNG + +N KMSKSLGNF T+RQI E+Y LR F+++AHYRSPLN+S +
Sbjct: 252 FARYWMHNGFLNIDNRKMSKSLGNFRTVRQIGEQYDLQVLRFFMLNAHYRSPLNFSADLM 311
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN-------PAAEDCINKLRDEFHARMS 290
++A +++ + + + LS +++G I AE + K F A M
Sbjct: 312 EAAKNSL----ERILEAAGKLSDRKDNGAAENITEEELALLKEAEGFVAK----FEAAMD 363
Query: 291 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 350
DD NT+ L F+ +KF N++++ + ++ L E L K+ + +LGL
Sbjct: 364 DDFNTADALAAIFE-LVKFANTNVD---ENSSREFAGGLYEELFKLSD-------VLGL- 411
Query: 351 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 410
K K+ E+ ++++ LI+ER AARK KDF ++D+IR +L +KGI L
Sbjct: 412 --------------KIEKKEEILDKEIEDLIQERQAARKAKDFQRADEIRDELLKKGIIL 457
Query: 411 MDMGKETIWR 420
D + W+
Sbjct: 458 KDTREGVKWQ 467
>gi|409202160|ref|ZP_11230363.1| cysteinyl-tRNA synthetase [Pseudoalteromonas flavipulchra JG1]
Length = 459
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/426 (40%), Positives = 232/426 (54%), Gaps = 48/426 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ L+ R + D L LP +P V+ HM++I +MI ++I
Sbjct: 73 KIIKRAAENKESINDLTVRMTKAMHEDFTALNMLPADIEPTVTGHMDEIIEMIVRLIEKG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F V YG+LS Q LE +AG RV V K +P DF LWK AKAGEP
Sbjct: 133 HAYVAKDGDVLFDVSTFEQYGQLSQQDLEMLQAGARVEVAQDKDDPLDFVLWKKAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 AWQSPWGEGRPGWHIECSAMSSKHLGEFFDIHGGGSDLQFPHHENEIAQSCCANNGRYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
W+H G V N EKMSKSLGNFFT+R++ + + +R+FLI+ HYRS LNYS L+ A
Sbjct: 253 TWIHTGMVQVNKEKMSKSLGNFFTVREVLKAFDRETVRYFLINGHYRSQLNYSQENLEQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ IY L+ E+ + + R F M+DD NT L
Sbjct: 313 RSSLERIYTALRGVELVEVELKGNAYVER---------------FETAMNDDFNTPEALP 357
Query: 301 GAFQDALKFINSSLNMLKKKQPK---QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
F+ ++ +N LK K + L+ ++ EVL I
Sbjct: 358 VIFE-----LSKEVNRLKDSDAKAAGEHAFILV--------KLAEVLGI----------- 393
Query: 358 VLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
Q ++ + E +++V Q LIE+R +AR+NKD++ +D+ R LT G+ L D
Sbjct: 394 --AQQDPESFLQGEQDDDEVAQIEALIEKRRSARENKDWAAADEARDALTALGVVLEDSA 451
Query: 415 KETIWR 420
+T WR
Sbjct: 452 GKTTWR 457
>gi|197301390|ref|ZP_03166471.1| hypothetical protein RUMLAC_00121 [Ruminococcus lactaris ATCC
29176]
gi|197299547|gb|EDY34066.1| cysteine--tRNA ligase [Ruminococcus lactaris ATCC 29176]
Length = 468
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 237/430 (55%), Gaps = 42/430 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G +S RY +E DM + P T P ++ + + MI +I
Sbjct: 72 KIIKKANEEGVTAEEISKRYIEECKKDMEGMNIQPATKNPLATEEIGGMISMIETLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY G V++ K YG+LS + L++ ++G R V+ + K + DF LWK K G
Sbjct: 132 YAYEKNGTVYYRTRKFAEYGKLSHKNLDDLQSGGRALLVSGEDEKEDSLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W SPWG GRPGWHIECS MS YL + DIH GG DLIFPHHENEIAQS AA
Sbjct: 192 EPAWKSPWGEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLIFPHHENEIAQSEAANGKEF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YWMHNG + +N KMSKSLGNFFT+R+I+E+Y LR F++SAHYRSPLN+S ++
Sbjct: 252 AKYWMHNGFLNIDNRKMSKSLGNFFTVREISEKYDLQVLRFFMLSAHYRSPLNFSAELME 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR------DEFHARMSDD 292
+A + + I ++ + ++ AR +ED KL + F M DD
Sbjct: 312 AAKNGLERITTAAENLKFLIN-------NARTEDMSEDERKKLAGSIAYVENFEKAMDDD 364
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT+ ++ F+ +K++N++ + K+ Q +L + L ++ + +LG++
Sbjct: 365 FNTADAISAVFE-LVKYMNTTTDGASSKEYLQ---NLFDCLIRLTD-------VLGIIVD 413
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
K E+ D+ LIEER AARK K+F+++D+IR +L KGI L D
Sbjct: 414 ---------------KEDEILASDIEALIEERQAARKAKNFARADEIRDELLAKGIILKD 458
Query: 413 MGKETIWRPC 422
+ W+
Sbjct: 459 TREGVQWKKA 468
>gi|323499496|ref|ZP_08104466.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
gi|323315369|gb|EGA68410.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
Length = 460
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 239/422 (56%), Gaps = 39/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++++++I +++ +I
Sbjct: 73 KIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEIIELVETLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F + K +YG+LS Q L+ +AG RV ++S KR+ DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEIAKYDDYGKLSRQDLDQLQAGARVEIESAKRSSLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHARMSDDLNTSHI 298
++ +Y +L+ ++++ PAA ED + + D M+DD NT
Sbjct: 313 RASLERLYTSLRGLDISV-------------PAAGGEDYVKRFTDA----MNDDFNTPEA 355
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F D + IN + K + + +L + E+ +V+ IL P
Sbjct: 356 YSVLF-DMAREIN---------RLKTEDVMAASALGALMRELADVIGILHQDPEAF---- 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK A E+ E + LI+ R +R KD++ +D R LT GI L D + T
Sbjct: 402 ---LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGSEGTT 456
Query: 419 WR 420
WR
Sbjct: 457 WR 458
>gi|291613145|ref|YP_003523302.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583257|gb|ADE10915.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
Length = 491
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 179/438 (40%), Positives = 240/438 (54%), Gaps = 40/438 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ +L+ R+ D L P ++PR + ++ Q+ +M+ Q+ N
Sbjct: 73 KIIKRAAENKESIHALTQRFIDAMHEDADTLGVQRPDHEPRATQYVPQMLEMVAQLEQNG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV K YG+LSG+ LE+ RAGERV V S K +P DF LWK AK GE
Sbjct: 133 LAYQAADGDVNYAVRKFDGYGKLSGKSLEDLRAGERVEVVSDKHDPLDFVLWKHAKDGEA 192
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
WDS WG GRPGWH+ECSAM++ L + FDIHGGG DL FPHHENEIAQS A +
Sbjct: 193 DEVKWDSKWGKGRPGWHLECSAMASDILGNHFDIHGGGADLQFPHHENEIAQSEGAHRCQ 252
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V +NEKMSKSLGNFFTIR++ ++Y +R F++ AHYRSPLNYS + L
Sbjct: 253 YVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLKKYDAEVVRFFILRAHYRSPLNYSDVHL 312
Query: 238 DSASDAVFYIYQTLQDCEVA--LSPFQE-------HGKTARINPAAEDCINKLRDEFHAR 288
D A A+ +Y L+ + L P E G+ AR D F +
Sbjct: 313 DDAKGALTRLYTALKSAPSSSILPPEGEGSEFPSPSGRGAR-GEGVIDWDTPHAARFKSA 371
Query: 289 MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILG 348
M DD NT + F D +N S ++ E+K + +LG
Sbjct: 372 MDDDFNTPEAIAVLF-DLANEVNRSQSVTAAA------------------ELKTLAGVLG 412
Query: 349 LLPPGAYSEVLQQLKDKALKRAELTEE------DVLQLIEERAAARKNKDFSKSDQIRAD 402
LL + LQ L T E D+ LIE R AA+K+K+F+++D+IR +
Sbjct: 413 LLQRDP-QDFLQGRASMNLTVPTPTLEASGGALDIDALIEARIAAKKSKNFAEADRIRKE 471
Query: 403 LTRKGIALMDMGKETIWR 420
L GI L D + T WR
Sbjct: 472 LLGAGIVLEDTPQGTTWR 489
>gi|113867241|ref|YP_725730.1| cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
gi|123134207|sp|Q0KCA9.1|SYC_CUPNH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113526017|emb|CAJ92362.1| Cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
Length = 462
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/429 (41%), Positives = 233/429 (54%), Gaps = 53/429 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE L+ R+ Q D A L + P ++PR +D++ Q+ DMI ++
Sbjct: 75 KIIRRAAENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYVPQMLDMIGKLEAKG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V K YG+LSG+ LE+ RAGERV+ + K++P DF LWK+AKA EP
Sbjct: 135 LAYQASDGDVNYSVRKFAGYGKLSGKSLEDLRAGERVSANDAKQDPLDFVLWKSAKASEP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
WDS WG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A
Sbjct: 195 PESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADLQFPHHENEIAQSEGASGKP 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y +R F++ AHYRSPLNYS L
Sbjct: 255 FVNMWMHNGFVRINDEKMSKSLGNFFTIREVLKSYDAEVVRFFILRAHYRSPLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR-----MSDD 292
D A A+ +Y L+D + P C DE HAR M DD
Sbjct: 315 DDARHALTRLYTALKDSQ----------------PGG--CAVDW-DEPHARRFAEAMGDD 355
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT ++ F D IN + + +Q +K + LGLL
Sbjct: 356 FNTPIAMSVLF-DLASEINRTGSTAAARQ------------------LKGLAGTLGLLER 396
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
++ + D ++ E + LI R A+ ++F+++D+IRA L GI L D
Sbjct: 397 DPHTFLQGGRSDDG-----ISPEQIETLIAARKTAKVERNFAEADRIRAQLLEAGIVLED 451
Query: 413 M-GKETIWR 420
G T WR
Sbjct: 452 KPGGATEWR 460
>gi|163801179|ref|ZP_02195079.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
gi|159175528|gb|EDP60325.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
Length = 460
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 238/422 (56%), Gaps = 39/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ SL++R E VD L P +PR + + +I +++ ++I
Sbjct: 73 KIIKRAAENGESCDSLTDRLIGEMHVDFDSLNMKRPDVEPRATQFIAEIIELVEKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V + YG+LS Q L+ +AG RV +++ KR+P DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEVRQFKEYGKLSKQDLDQLQAGARVDIETAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ + +P E+ + + F A M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDSNAAP-----------AGGEEYVTR----FTAAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F A +N LK + +E ++ ++E+ ++G+L P A+
Sbjct: 358 VLFDMA-----REVNRLKTEN--------VEKASELGALMRELADVIGILHQDPEAF--- 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK A E+ E + LI+ R +R KD++ +D R LT GI L D + T
Sbjct: 402 ---LKGDAGDDEEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGSEGTT 456
Query: 419 WR 420
WR
Sbjct: 457 WR 458
>gi|87122362|ref|ZP_01078243.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
gi|86162337|gb|EAQ63621.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
Length = 460
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 240/420 (57%), Gaps = 37/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E P SL+ R + D L P +P+ ++ M++I DMI+ +++
Sbjct: 73 KIIKRAAENDETPESLTLRMIEAQTQDELKLGNKLPDREPKATEFMQEIIDMISVLVDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F EK YG+L+ ++LE+ AG R+ V+S K NPADF LWK+AK GE
Sbjct: 133 FAYQGSTGDVYFRTEKHEAYGKLNNRKLEDMLAGARIDVESAKENPADFVLWKSAKEGEV 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAMS + L FDIHGGG DL FPHHENEIAQS A V+
Sbjct: 193 HWQSPWGIGRPGWHIECSAMSTNCLGPHFDIHGGGPDLKFPHHENEIAQSECANGTDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V NNEKMSKSLGNFFT+R + E+Y+P +R ++S+ YRSP++YS L A
Sbjct: 253 YWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPEVIRFLMVSSQYRSPIDYSEQSLLEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI-NKLRDEFHARMSDDLNTSHIL 299
+ +Y +LQ +D I + + + M DD NT +
Sbjct: 313 KVGLERMYTSLQG-----------------QALTDDYIASSYTERYQQAMDDDFNTPVAI 355
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ F D ++ +N + + S ++ + E+ + +LGLL G E
Sbjct: 356 SVLF-DLVRELNKA------------KASAADNAPILAKELSVLAELLGLL--GQDPEYF 400
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
LK+ L ++E ++ LI ER ARK+K+F++SD+IR +L+ +GI L+D + T W
Sbjct: 401 --LKNSVLNNG-ISEAEIETLIAERIQARKDKNFARSDEIRDELSEQGITLLDSREGTSW 457
>gi|375006897|ref|YP_004980527.1| cysteinyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448236395|ref|YP_007400453.1| cysteinyl-tRNA synthetase [Geobacillus sp. GHH01]
gi|359285743|gb|AEV17427.1| Cysteinyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445205237|gb|AGE20702.1| cysteinyl-tRNA synthetase [Geobacillus sp. GHH01]
Length = 466
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 234/424 (55%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ A +LGE+ +++ R+ + Y D+ L C PRV+++++ I + I +I+
Sbjct: 75 KLIKAARELGESVPAIAERFIEAYFEDIQALGCKKADIHPRVTENIDTIIEFIQALIDKG 134
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV++ K YG+LS Q ++ +AG R+ + +K +P DFALWKAAK GE
Sbjct: 135 YAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEIGEKKDDPLDFALWKAAKEGEIC 194
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 195 WDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKY 254
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ NNEKMSKSLGNF + I P LR F++S HYR P+NYS L+SA
Sbjct: 255 WLHNGYLNINNEKMSKSLGNFVLVHDIIREIDPQVLRFFMLSVHYRHPINYSEELLESAR 314
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED-----CINKLRDEFHARMSDDLNTS 296
+ L+ + A Q H A N D I +R F M DD NT+
Sbjct: 315 -------RGLERLKTAYGNLQ-HRLQASTNLTDNDEEWVSRIADIRASFIREMDDDFNTA 366
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ + F+ A K N L Q K +I + + E +++ +LGL
Sbjct: 367 NGIAVLFELA-KQANLYL------QEKTTSEKVIHAFLR---EFEQLADVLGL------- 409
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
LK+ EL +E++ LI++R ARKN+DF+ +D+IR +L K I L D +
Sbjct: 410 ---------TLKQDELLDEEIEALIQKRNEARKNRDFALADRIRDELRAKNIILEDTPQG 460
Query: 417 TIWR 420
T W+
Sbjct: 461 TRWK 464
>gi|452972575|gb|EME72404.1| cysteinyl-tRNA ligase [Bacillus sonorensis L12]
Length = 467
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 231/423 (54%), Gaps = 37/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE ++ R+ + Y D+ L C PRV+++M+ I D I +I+
Sbjct: 74 KLIKAANELGEEVPVIAERFIKAYFEDVGSLGCSKADCHPRVTENMDDIIDFIQTLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV++ +YG+LS Q ++ R+G R+ V +K + DFALWK+AK E S
Sbjct: 134 YAYEADGDVYYKTRSFKDYGKLSHQSIDELRSGARIQVGEKKEDALDFALWKSAKENEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLTFPHHENEIAQSEALTGKPFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I + + P LR F++S HYR P+NYSV L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKEHDPQVLRFFMLSVHYRHPINYSVELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTA-RINPAAEDCINKL---RDEFHARMSDDLNTSH 297
+A + A S + K++ + + + K+ R F M DD NT++
Sbjct: 314 NA-------FGRLKTAYSNLRHRLKSSTNLTEGDSEWLEKIEEQRKAFETAMDDDFNTAN 366
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
++ F D K N L Q K +I++ N E+ +LG
Sbjct: 367 AISVLF-DLAKHANYYL------QEKNTAEHVIQAFL---NLFDEICSVLGF-------- 408
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+L+ EL + ++ +LIE+R AR+N+DF+ SDQIR L I L D + T
Sbjct: 409 --------SLQEQELLDAEIEELIEKRNEARRNRDFATSDQIRDQLKSMNIILEDTPQGT 460
Query: 418 IWR 420
W+
Sbjct: 461 RWK 463
>gi|222152121|ref|YP_002561281.1| cysteinyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
gi|222121250|dbj|BAH18585.1| cysteinyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
Length = 469
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/417 (38%), Positives = 227/417 (54%), Gaps = 35/417 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE +++R+ + Y D L C T+ PRV DHME I + I ++I
Sbjct: 78 KLIKAANELGETVPEIADRFIEAYFEDTHALNCKTATHHPRVMDHMEDIIEFIDELIKKG 137
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F K YG+LS Q ++ + G R+ K + DFALWK AK GE S
Sbjct: 138 YAYESGGDVYFRTRKFEGYGKLSHQSIDELKVGARIQAGELKDDALDFALWKTAKPGEIS 197
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ +L DIH GG DL FPHHENEIAQS A + +Y
Sbjct: 198 WQSPWGEGRPGWHIECSVMAKKHLGDSIDIHAGGSDLTFPHHENEIAQSEAHNDTTFANY 257
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + +NEKMSKSLGNF + I + P LR F+IS HYR+P+NY++ + SA
Sbjct: 258 WLHNGFINIDNEKMSKSLGNFILVHDIIKEIDPNVLRFFMISVHYRNPINYNMELVASAK 317
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ I YQ +++ + H +T + I+ + +F M DD NT++
Sbjct: 318 AGLERIQNAYQAMKERQAISVDVVNHAETILV-------IDNILKQFETAMDDDFNTANA 370
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T ++ + K+ Q S + K+ N EV + +SEV
Sbjct: 371 ITAWYE-----------LAKQANIYNQNPS---TDLKVINRFIEVFEV--------FSEV 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
L D + L +E+V +LIEER ARKNKDF ++D+IR L + I L D +
Sbjct: 409 LGVKLDTS---DTLLDEEVERLIEERQEARKNKDFKRADEIRDALKAQNIILEDTAQ 462
>gi|384084823|ref|ZP_09995998.1| cysteinyl-tRNA synthetase [Acidithiobacillus thiooxidans ATCC
19377]
Length = 466
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 239/423 (56%), Gaps = 43/423 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ +L+ R+ + D A L C P +PR ++H+ +++MI ++I
Sbjct: 79 KIIRRALEQGESIQALTARFIEAMHADEAALLCQKPDLEPRATEHVGAMQNMIAELIERG 138
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++AV P+YG+LSG+ ++ +G RV + KR+P DFALWKAAK EP
Sbjct: 139 HAYAAANGDVYYAVRSFPDYGKLSGKSIDELNSGARVELGEDKRDPLDFALWKAAKPDEP 198
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS-CAACQDSNV 179
SW SPWG GRPGWHIECSAMSA L FDIHGGG DL FPHHENEIAQS A C ++
Sbjct: 199 SWSSPWGEGRPGWHIECSAMSADALGCTFDIHGGGADLQFPHHENEIAQSQGAGCAFAH- 257
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YWMHNG V N+EKMSKSL NF T+R++ + LR F++S+ YRSPL+YS L+
Sbjct: 258 -YWMHNGFVRINDEKMSKSLNNFLTVRELLPLFSGEVLRFFILSSQYRSPLHYSEEGLEQ 316
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTAR-INPAAEDCINKLRDEFHARMSDDLNTSHI 298
A + +Y L+ G AR I P + ++ R+ FH MSDD +T
Sbjct: 317 ARAGLTRLYTALR------------GMPARQIVP---ELGSEWRERFHNAMSDDFHTPAA 361
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L F + +N L+ +Q E + ++E+ +LG +
Sbjct: 362 LATLFD-----LAREVNRLRDEQS--------EVAAPLATLLRELAAMLG---------I 399
Query: 359 LQQLKDKALKRAELTEED-VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
LQ+ + + + ++ + + I R AAR+ KDF+ +D IRA+L GI L D T
Sbjct: 400 LQEDPESYFRGSNESDNAWIEERIAARLAARQKKDFAGADAIRAELAAAGIILEDGPAGT 459
Query: 418 IWR 420
WR
Sbjct: 460 SWR 462
>gi|354594111|ref|ZP_09012154.1| cysteinyl-tRNA synthetase [Commensalibacter intestini A911]
gi|353673222|gb|EHD14918.1| cysteinyl-tRNA synthetase [Commensalibacter intestini A911]
Length = 544
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/466 (38%), Positives = 248/466 (53%), Gaps = 47/466 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I RA E+ SL+ R Q++ DM + LPP +PR ++H+ +I MI Q+I N
Sbjct: 77 KINARAKLNNESIQSLTERTTQDFHQDMQSMYILPPDVEPRATEHIAEIISMIAQLIENG 136
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EG V F+V NYG LSG+ E AG RV V + K+NP DF LWK + A EP
Sbjct: 137 HAYAAEGHVLFSVPSYKNYGELSGRNPEELIAGARVEVATYKKNPGDFVLWKPSIADEPG 196
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS- 180
WDSPWG GRPGWHIECSAMS YL FDIHGGG DL+FPHHENE AQS S+ +
Sbjct: 197 WDSPWGKGRPGWHIECSAMSYRYLGKNFDIHGGGHDLLFPHHENECAQSLCCFPGSHFAN 256
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
W+HN + + EKMSKSLGNFFTIR+I E+++P A+R L+ AHYRS LN+S L A
Sbjct: 257 VWVHNAMLLVDGEKMSKSLGNFFTIREILEQHNPEAIRFALLQAHYRSVLNFSQSGLKEA 316
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTAR---INPAAEDCINKLRDEFHA-----RMSDD 292
+ Y+ L E L F +G+T R + A D + + + + +M D
Sbjct: 317 KQIMDRFYRALSAFEKELFIFDSYGETVRYLFTDQALIDVCHSINEAENGNQDAIKMVDF 376
Query: 293 LNTSHILTGAFQDALKFINSSLN------MLKKKQPKQQQLSLIESLRKIENEVKEVLR- 345
LN L INS + ++ K K+++ + + S K+ + K V +
Sbjct: 377 LNKIAKKEFFLGQYLYDINSHITKDTWHKLVTKIIDKKRKFTKLRSFLKVLSHKKYVSKS 436
Query: 346 ----ILGLLPPGAYSEVLQQLKDKALK-------RAELTEE------------------- 375
+L L V+ QL D+ALK + + E
Sbjct: 437 FLNAMLDDLNTPKALMVMHQLADQALKGDKEAAFKLKFAGEQLGLFNTLPTQWFQNTDKA 496
Query: 376 -DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
++ LIE+R AA+K +DF+ +D+IR +L +GI L D + TIWR
Sbjct: 497 QEIEALIEQRNAAKKARDFTTADRIRDELKDQGIMLEDSPQGTIWR 542
>gi|148980442|ref|ZP_01816064.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
gi|145961245|gb|EDK26558.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
Length = 461
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 238/422 (56%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++ + +I +++ ++I
Sbjct: 73 KIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEIIELVEKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V+K YG+LS Q L+ +AG RV VDS KR+P DF +WK +K GEP
Sbjct: 133 FAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRSPLDFVVWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDLLAHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ ++ +P E+ + + F M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDLTAAP-----------AGGEEYVTR----FSTAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ A +N +K + IE + ++E+ I+G+L P A+ +
Sbjct: 358 VLFEMA-----REINRIKTES--------IEKASGLGALMRELADIIGILHQDPEAFLQ- 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
D A E+ E + LI+ R +R +KD++ +D R L GI L D + T
Sbjct: 404 ----GDAAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNELGIVLEDGPEGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|301051827|ref|YP_003790038.1| cysteinyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
CI]
gi|300373996|gb|ADK02900.1| cysteinyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
CI]
Length = 465
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 245/422 (58%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LGE+ ++++R+ + Y D+ L C T PRV+++M+ I + I +++N
Sbjct: 74 KLIKAANELGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F ++ YG+LS Q + + R G R+ V +K++P DFALWKAAK GE
Sbjct: 134 YAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I ++Y P +R F++S HYR P+N+S L S +
Sbjct: 254 WMHNGYININNEKMSKSLGNFILVHDIIKQYDPQLIRFFMLSVHYRHPINFSEELLQSTN 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ + I Y L+ + + +H + + + K + F M+DD NT++
Sbjct: 314 NGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD------LEKFQTAFEEAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + A N + L ++ +IE+ K +++ + ILGL
Sbjct: 368 ITELYNVA----NHANQYLLEEHTST---VVIEAYVK---QLETLFDILGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + EL +E++ +LI++R ARKN+DF+ SDQIR DL + I L D + T
Sbjct: 409 -------ELAQEELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKDRNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|406666950|ref|ZP_11074713.1| Cysteine--tRNA ligase [Bacillus isronensis B3W22]
gi|405385233|gb|EKB44669.1| Cysteine--tRNA ligase [Bacillus isronensis B3W22]
Length = 467
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 236/423 (55%), Gaps = 36/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+LGE L++R+ Y D+ L C PRV++HM+ I + I +I+
Sbjct: 74 KIIKAANELGEETSVLTDRFIAAYFEDITALGCQKADAHPRVTEHMDDIIEFIKVLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV++ K YG+LS Q +++ + G R+ +K +P DFALWKAAKAGE
Sbjct: 134 YAYESQGDVYYRTRKFNGYGKLSHQSIDDLKVGARIEAGEKKEDPLDFALWKAAKAGEIK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ +L DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WASPWGEGRPGWHIECSVMAREHLGDTIDIHAGGQDLTFPHHENEIAQSEAHNDKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++ P LR F++S HYR+P+N++ +++A
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFILVNDIRQQIDPQVLRFFMLSVHYRNPINFAQDLVEAAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHARMSDDLNTSHI 298
+ + I + + E L+ +A + +E + K ++ +F M+DD NT++
Sbjct: 314 NGLDRIRTSYTNVEHRLTS------SASLGDNSEQWLEKIGHIKVDFENAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE-NEVKEVLRILGLLPPGAYSE 357
++ F +LS I ++ E N KEVL+ + + +
Sbjct: 368 VSALF----------------------ELSHIANVYLNEANTDKEVLQAILTM----FDT 401
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ L A L +E++ LIEER ARKN+DF++SD+IR L I L D + T
Sbjct: 402 IGNVLGIHIKVEAGLLDEEIEALIEERNQARKNRDFARSDEIRDQLLGMDIVLEDTRQGT 461
Query: 418 IWR 420
W+
Sbjct: 462 RWK 464
>gi|374705751|ref|ZP_09712621.1| cysteinyl-tRNA synthetase [Pseudomonas sp. S9]
Length = 460
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 226/422 (53%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE L R D A L L P +PR + H+ + +MI +I+
Sbjct: 73 KIIRRAQENGEGFEVLVERMIAAMHEDEARLSVLRPDMEPRATSHISGMHEMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWK AK GEP
Sbjct: 133 FAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDESKQDPLDFVLWKGAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS AA +
Sbjct: 193 SWTSPWGEGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATGKLYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+FL+S+ YRSP+NYS L A
Sbjct: 253 AWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYFLVSSQYRSPINYSEDSLKEA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A PA D + F M DD N+
Sbjct: 313 KGALERFYHALKGLPEA-------------APAGGDAYA---ERFAEAMDDDFNSPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL--LPPGAYSEV 358
F+ + +N L+ +E+ + +K++ +LG+ L P ++ +
Sbjct: 357 VLFE-----MVREINRLRDTD--------LEAAAGLAARLKQLASVLGVLQLEPESFLQ- 402
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
A + ++ E V LI R AR K++++SD+IR LT G+ L D T
Sbjct: 403 -------AGAKGKVDAEQVDALIAARLQARSEKNWAESDRIRDQLTAMGVVLEDGKGGTT 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|404372664|ref|ZP_10977959.1| cysteinyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
gi|226911201|gb|EEH96402.1| cysteinyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
Length = 466
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 235/421 (55%), Gaps = 27/421 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I++AN+ G + +RY EY D L + + PR +++++ I + + +I
Sbjct: 72 KMIKKANEEGTTVSDIGDRYIDEYYKDADGLNIMRASINPRATEYIQDIIEFVKGLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F +K +YG+L GQ LE+ +AG R+ VD RK +P DFA+WKA K GEP+
Sbjct: 132 YAYEVDGDVYFRTKKFESYGKLIGQNLEDLQAGARINVDERKEDPMDFAVWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG+DL FPHHENEIAQS A Y
Sbjct: 192 WESPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDLAFPHHENEIAQSEALTGKPFARY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H + NN+KMSKSL NF T R I ++Y +R ++S HYR LN+S L+SA
Sbjct: 252 WLHGAFLNINNQKMSKSLNNFLTARDILKQYDADVVRFLMLSGHYRVQLNFSDDLLESAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+V +Y + + E + ++ + A + ++ R + +M DD NT+ +T
Sbjct: 312 ASVERLYNAVSNLENLIDEVKKESMDDK-EKAYLEFLDVYRQRYIEKMDDDFNTADAITA 370
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F D +K IN+++++ ++ + LSLI L P G +LQ
Sbjct: 371 IF-DLIKDINTNVSIESSRELCEAALSLIRELGN---------------PLG----ILQN 410
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 421
+L EE++ +LI ER ARK+++F+ +D+IR DL + I L D + W+
Sbjct: 411 STKGSL------EEEIERLIAERQQARKDRNFALADKIRNDLKARNIVLEDTPQGVRWKK 464
Query: 422 C 422
Sbjct: 465 V 465
>gi|259909186|ref|YP_002649542.1| cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|387872139|ref|YP_005803519.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
gi|224964808|emb|CAX56330.1| Cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|283479232|emb|CAY75148.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
Length = 462
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 229/423 (54%), Gaps = 39/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ L+NR E D A L LPP +PR + H+ +I +++ ++I +
Sbjct: 73 KIIKRANENGESIERLTNRMIDEMHKDFAALNILPPDLEPRATRHIAEIIELVEKLITRE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPADFALWKAAKAGE 119
AYV GDV F+V+ P YG LS Q L+ +AG RV V + KRNP DF LWK +KA E
Sbjct: 133 HAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAADVKRNPMDFVLWKMSKADE 192
Query: 120 PSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNV 179
P W SPWG GRPGWHIECSAM+ LS FDIHGGG DL+FPHHENEIAQS A V
Sbjct: 193 PGWASPWGNGRPGWHIECSAMNCKQLSEHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYV 252
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS LNY L+
Sbjct: 253 NYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLMSGHYRSQLNYGEDNLNQ 312
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A A+ +Y L++ + +P AR F M DD NT
Sbjct: 313 ARSALERLYIALRNTDTRATPAGGEEFEAR---------------FREAMDDDFNTPEAY 357
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSE 357
+ F + +N +K + P L LR + +LGLL P + +
Sbjct: 358 SALFD-----LAREVNRMKGEDPAAAD-GLAARLRVLGG-------VLGLLEQDPQQFLQ 404
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ D+ + + E LI+ R ARK K+++++D R L GI L D T
Sbjct: 405 SGVNINDEEVAQIE-------ALIQMRIDARKEKNWAQADVARDRLNEMGIVLEDGAGGT 457
Query: 418 IWR 420
WR
Sbjct: 458 RWR 460
>gi|238790851|ref|ZP_04634606.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
gi|238721068|gb|EEQ12753.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
Length = 473
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 227/422 (53%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L++R E D L P +PR + H+ +I ++ ++I D
Sbjct: 85 KIIKRAIENNETCEQLTSRMLAEMHKDFDALNLERPDLEPRATHHIPEIIELTERLIARD 144
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF LWK +K GEP
Sbjct: 145 HAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKPGEP 204
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 205 SWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 264
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 265 YWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQLNYSEENLKQA 324
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ G A PA + F A M DD NT +
Sbjct: 325 RASLERLYTALR------------GTDANATPAGG---AEFEARFRAAMDDDFNTPEAYS 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F I +N LK + I + + E++++ +LGLL P + +
Sbjct: 370 VLFD-----IAREVNRLKTED--------IAAANGLAAELRKLAHVLGLLEQDPELFLQS 416
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + + E LI++R AR +KD++ +D R L GI L D + T
Sbjct: 417 GAQTDDDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTT 469
Query: 419 WR 420
WR
Sbjct: 470 WR 471
>gi|317486410|ref|ZP_07945237.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
gi|316922320|gb|EFV43579.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
Length = 485
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 240/422 (56%), Gaps = 15/422 (3%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAND G + ++ Y + Y DM L + +PR ++H++++ ++ ++I +
Sbjct: 72 KIIKRANDEGVSSTEIAETYIKAYHEDMDRLGVIRADIEPRATEHIQEMLNLTERLIADG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V P YG+LSG+ ++ R+G RV K +P DFALWK+AK GEP
Sbjct: 132 KAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGDEKEDPLDFALWKSAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAMS Y+ DIHGGG+DLIFPHHENEIAQ+ AA +
Sbjct: 192 YWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFPHHENEIAQTEAALGKPLAN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V ++EKMSKSLGNF TIR I E Y LR+FL HYRSP+++S+ +D +
Sbjct: 252 IWMHNGFVQVDSEKMSKSLGNFKTIRDILESYLAETLRYFLAGKHYRSPIDFSLDNMDES 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDE---FHARMSDDLNTSH 297
+ +Y+ L++ + AL+ +E+ K A + + +L+ + F + DD+NT+
Sbjct: 312 ERSQKRVYECLREVDKALA--RENWKPG---AAPAELVEELKQQDQSFMDALEDDVNTAA 366
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F + I + KK + + ++ + R + +L + P G
Sbjct: 367 AMGHLFN--MVRIAGRVLEDKKLRNSEGGRDILRAFRDATAKWDTLLGLFAQKPEG---- 420
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
L L++ +R L V L+ ER AR KDF++SD R +L G+ + D +
Sbjct: 421 FLASLREIRARRRGLDMNKVAGLLRERQEARAAKDFARSDAARDELAALGVEVRDTPEGP 480
Query: 418 IW 419
+W
Sbjct: 481 VW 482
>gi|429763128|ref|ZP_19295486.1| cysteine--tRNA ligase [Anaerostipes hadrus DSM 3319]
gi|429179429|gb|EKY20678.1| cysteine--tRNA ligase [Anaerostipes hadrus DSM 3319]
Length = 467
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 235/421 (55%), Gaps = 31/421 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++AN+ G ++ RY +E DM L P T+QPR ++ + + MI +I
Sbjct: 72 KIIKKANEEGVTATEIAERYIKECKQDMEALNIKPATHQPRATEEIGGMIKMIQTLIKKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY V+G V+F +YG+LS + +++ AG R V + K +P DF LWK K G
Sbjct: 132 HAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTGEEGKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
E +WDSPWG GRPGWHIECS MS Y+ DIH GG DLIFPHHENEIAQS A +
Sbjct: 192 EIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLIFPHHENEIAQSEACNGEKF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHNG + NN+KMSKS GNFFT+R+I E+Y +R F++SAHYR+PLN+S ++
Sbjct: 252 ANYWMHNGFLNINNKKMSKSAGNFFTVREIGEKYPLQVIRFFMLSAHYRTPLNFSDTLVE 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
SA + I + C ++ +E G ++ I L +F M DD NT+
Sbjct: 312 SAKTGLDRILTAIDLCR-EMAAKEETGSLSKEETEHFANIEVLVKKFEDAMEDDFNTADA 370
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ ++++ + S + K+VL++L ++
Sbjct: 371 VSAIFE-----------IVRESNSTVKDFSA--------DYAKKVLKVL--------EDL 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + K E+ +E++ +LIEER AARKNKDF+++D+IR L +GI L D +
Sbjct: 404 CSVLGIETTKEEEILDEEIEKLIEERQAARKNKDFARADEIRDQLLEQGIVLKDTREGVK 463
Query: 419 W 419
W
Sbjct: 464 W 464
>gi|220904715|ref|YP_002480027.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254781675|sp|B8J0S2.1|SYC_DESDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219869014|gb|ACL49349.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 483
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 230/419 (54%), Gaps = 11/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN G + ++ Y + DM L +PR +DH+++I+D+ +++
Sbjct: 72 KIINRANKEGLDWREVAQTYINAFYEDMDRLGVQRADVEPRATDHIQEIQDLCAKLVAEG 131
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V P YG+LSG+ L+ +G RVA K +P DFALWKAAK GEP
Sbjct: 132 KAYATTSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGEEKEDPLDFALWKAAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECSAMS YL DIHGGG DL+FPHHENEIAQ+ A C
Sbjct: 192 SWESPWGPGRPGWHIECSAMSESYLP--LDIHGGGQDLVFPHHENEIAQTEAVCHCHLAR 249
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V N EKMSKSLGNF TIR I E Y P LR FL+ HYRSP++++ +D A
Sbjct: 250 YWVHNGFVQVNAEKMSKSLGNFKTIRDILESYLPETLRFFLLGKHYRSPIDFTAEGMDEA 309
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L + + AL+ +E K + + + + M+DDLNT+ L
Sbjct: 310 EKALHRVYTALLETQKALT--REKWKKSPLPAQLTEDWAAQAEALDEAMNDDLNTAQALG 367
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F ++ +N L K + + L++ + L + G P L
Sbjct: 368 HIFTQ-VRLVNRLLED-KTLRAAEAGRDLLQDFLARAEQWNTRLGLFGQQPEA----FLA 421
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
L+ R + V L++ER AR NKDF++SD +R L G+++ D + W
Sbjct: 422 DLRRIRAARRNIDIPRVEALLQERQEARANKDFARSDALRQALLDLGVSVQDTPEGQNW 480
>gi|430760198|ref|YP_007216055.1| Cysteinyl-tRNA synthetase [Thioalkalivibrio nitratireducens DSM
14787]
gi|430009822|gb|AGA32574.1| Cysteinyl-tRNA synthetase [Thioalkalivibrio nitratireducens DSM
14787]
Length = 469
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/417 (40%), Positives = 225/417 (53%), Gaps = 45/417 (10%)
Query: 17 LSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEK 76
L+ RY + D+A L LPPT +PR + H+ Q+ +I ++I AY+ + +AV
Sbjct: 93 LTARYAHAFHEDVAGLGALPPTLEPRATKHIPQMISLIERLIARGHAYLADHHALYAVHS 152
Query: 77 SPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIE 136
P YGRLSG+ L++ RAG RV V K++PADF LWK +K GEP+W+SPWGPGRPGWH+E
Sbjct: 153 YPGYGRLSGRSLDDMRAGARVEVAEYKKDPADFVLWKPSKPGEPAWESPWGPGRPGWHLE 212
Query: 137 CSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMS 196
CSAM +L DIHGGG DL+FPHHENEIAQ C A +W+HNGHVT + EKMS
Sbjct: 213 CSAMIETHLGDTIDIHGGGHDLVFPHHENEIAQGCGAHGVEYARFWVHNGHVTVDGEKMS 272
Query: 197 KSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEV 256
KSLGNF +R++ Y LR L++ HYR+PLN+S L A +A+ +Y+ L+D
Sbjct: 273 KSLGNFRLLRELLAAYPGEVLRLALLARHYRAPLNFSERGLTQARNALNSMYRVLRD--- 329
Query: 257 ALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQ--DALKFINSSL 314
H T PAAE + F A + DDLNT + + DAL S
Sbjct: 330 -------HAGT----PAAE-ADGRESPVFEALL-DDLNTPEAIAELHRMADALASATSPD 376
Query: 315 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAEL 372
++K E+ LGLL PGA+ A
Sbjct: 377 EAARRK-----------------GELVAAGETLGLLQQDPGAWFHAGADTGPDA------ 413
Query: 373 TEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQ 429
E + Q I ER AARK +DF++SD IR +L G+ L D + T W+ V E+
Sbjct: 414 --EWIEQRIAERQAARKARDFARSDAIRDELAAAGVQLEDTAEGTRWQRTEAVSAEE 468
>gi|71280239|ref|YP_270455.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
gi|109894893|sp|Q47XL5.1|SYC_COLP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71145979|gb|AAZ26452.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
Length = 469
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/432 (40%), Positives = 224/432 (51%), Gaps = 50/432 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ E +L+ R D L P +PRV+ HM +I MI ++ +
Sbjct: 73 KIINRANENNETTEALTERTIAAMHQDFDSLNMARPDLEPRVTTHMNEIIAMIETLVTKE 132
Query: 62 CAYVV--------EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWK 113
AYV +GDV F V +YG+LSGQ LE ++G RV VD K NP DF LWK
Sbjct: 133 HAYVAGANAASTGQGDVLFDVSSYNDYGKLSGQNLEQLQSGSRVEVDQNKNNPLDFVLWK 192
Query: 114 AAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAA 173
+AK GEPSW SPWG GRPGWHIECSAM+A L FDIHGGG DL FPHHENEIAQSC A
Sbjct: 193 SAKPGEPSWSSPWGEGRPGWHIECSAMNAKELGHHFDIHGGGSDLTFPHHENEIAQSCCA 252
Query: 174 CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYS 233
V+YWMH G V + EKMSKSLGNFFTIR + +Y +R FL + HYRS LNYS
Sbjct: 253 LNTPYVNYWMHTGMVQVDQEKMSKSLGNFFTIRDVLAQYDAETVRFFLTTGHYRSQLNYS 312
Query: 234 VLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHARMS 290
L A +V IY +L+D +N ++ INK +F M
Sbjct: 313 TDNLTQARASVERIYTSLRD----------------VNIESDYVINKDSSFVKQFCQAMD 356
Query: 291 DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGL- 349
DD NT L F+ I+ LN+ K + L +L + I+GL
Sbjct: 357 DDFNTPQALAVLFE-----ISKELNVAKAAANNALAIDLASTLVALG-------EIVGLL 404
Query: 350 -LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGI 408
L P A+ + + A+ A LI +R AR +KD++ +D R L I
Sbjct: 405 QLDPAAFLQGDNDNDEVAIIEA---------LIVQRNQARIDKDWAMADDARDKLNAMNI 455
Query: 409 ALMDMGKETIWR 420
L D +T WR
Sbjct: 456 VLEDSAGKTTWR 467
>gi|435852952|ref|YP_007314271.1| cysteinyl-tRNA synthetase [Halobacteroides halobius DSM 5150]
gi|433669363|gb|AGB40178.1| cysteinyl-tRNA synthetase [Halobacteroides halobius DSM 5150]
Length = 476
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 242/421 (57%), Gaps = 22/421 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+ G L+N + + Y D A L PR ++H++++ ++I +I+
Sbjct: 74 KMIKRANEEGITVSELANEFIEAYYKDTAALNIKEADVYPRATEHIDEMIELIKDLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F V+K +YG+LS +++E+ +AG RV V++RK +P DF LWK +K GEP+
Sbjct: 134 YAYESNGDVYFRVDKFSDYGKLSNKKIEDLQAGARVEVNNRKESPIDFVLWKKSKDGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECS MS YL +KFDIH GG+DL FPHHENE+AQS A C + V Y
Sbjct: 194 WDSPWGAGRPGWHIECSVMSTKYLGAKFDIHTGGVDLTFPHHENEVAQSEAHCGNQVVKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ + EKMSKSLGNFFT R+I E Y P +R FLIS HYRSP+N+S L+ A
Sbjct: 254 WLHNGYINIDGEKMSKSLGNFFTTREILEEYSPAVVRFFLISKHYRSPINFSDQALEEAK 313
Query: 242 DAVFYIYQTLQDCEVALS--PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
+ + T+ + L P + + I +++F M+DD NT+ +
Sbjct: 314 AGLERLENTVDKLDHLLKQEPIEGELNGSHIKKVC----KSKKEKFITAMNDDFNTA-LA 368
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
TGA + + +N ++ + ++ +VKE L++ L ++VL
Sbjct: 369 TGALYELARELNRFIS---------------KDDFELTADVKESLQLAKDLFAELATDVL 413
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
L ++ + L V L++ R R +++ +D++R +L I + D + T W
Sbjct: 414 GILTEREVANQGLVGPLVELLLDLREDLRTKQEYQLADKVRDELAELDIEVKDTPQGTEW 473
Query: 420 R 420
+
Sbjct: 474 K 474
>gi|406903893|gb|EKD45834.1| hypothetical protein ACD_69C00115G0004 [uncultured bacterium]
Length = 468
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 236/419 (56%), Gaps = 36/419 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA +L + L+ + D L +PP ++PRV+DH+ +I DMI +I+ +
Sbjct: 73 KIIKRAQELNIDYKELTKQVIASMHADEKLLGNIPPDFEPRVTDHIPEIIDMIQTLIDKN 132
Query: 62 CAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +G DV+++V K YG LS + + G RV V K++P DF LWKAAK+ EP
Sbjct: 133 FAYPTKGGDVYYSVAKFKKYGELSHKDIGGLLLGIRVEVSEDKQDPLDFVLWKAAKSKEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ YL FDIHGGG DL FPHH+NE+AQS AA V+
Sbjct: 193 FWPSPWGNGRPGWHIECSAMAKKYLGKTFDIHGGGSDLQFPHHQNELAQSEAANDCPFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V +N EKMSKSLGNFFT++++ ++Y+P LR+F++ +HYRS +NYS LD+A
Sbjct: 253 YWMHIGFVQSNQEKMSKSLGNFFTLKEVLKKYNPEVLRYFVVISHYRSQINYSQENLDNA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y +++ E T + N+ FHA M DD NT +
Sbjct: 313 QSALQRFYISMRSLPT------EKNITFETD-------NQFYKNFHAAMQDDFNTPKAIA 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D + IN L ++ Q Q +L++ L G +LQ
Sbjct: 360 ILF-DLAREIN-QLRDSSQELKAQNQCALLKHL-------------------GWSLGILQ 398
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+ + LK + E + LI R AR+NK++ ++D+IRA+LT GI L D G T W
Sbjct: 399 ENPETFLKFG-VNIEKIETLIAARNQARQNKNWHEADKIRAELTTMGITLEDTGAGTTW 456
>gi|414161193|ref|ZP_11417454.1| cysteinyl-tRNA synthetase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876455|gb|EKS24361.1| cysteinyl-tRNA synthetase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 466
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/414 (39%), Positives = 229/414 (55%), Gaps = 33/414 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+R+ +L E+ +++RY Q + D L T PRV +HM+ I I ++
Sbjct: 73 KLIKRSKELNESVQEIADRYIQAFYEDTGALNVKKATSNPRVMNHMDDIIAFIQNLVEQG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F K YG+LS Q +++ + G R+ +K + DF LWK AK GE S
Sbjct: 133 YAYESEGDVYFRTRKFEGYGKLSHQSIDDLKVGARIESGEQKEDALDFTLWKKAKPGEIS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSP+G GRPGWHIECS M+ H L DIH GG DL FPHHENEIAQS A + +Y
Sbjct: 193 WDSPFGKGRPGWHIECSVMAYHELGETIDIHAGGSDLQFPHHENEIAQSEAHNHATFANY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + NNEKMSKSLGNF + I + P LR F+IS HYRSP+NY++ ++SA
Sbjct: 253 WMHNGFININNEKMSKSLGNFVLVHDIIKEVDPDVLRFFMISVHYRSPINYNMELVESAK 312
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ I YQ +++ E S ++ + I+ L +F M DD NT++
Sbjct: 313 AGLERIRNSYQAIEEREAIASDIEDQSDYI-------EQIDALLKQFETVMDDDFNTANA 365
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + L L K + S +K+ KEV +I +S+V
Sbjct: 366 ITTWY---------DLAKLANKYVMENTTS-----KKVIERFKEVFQI--------FSDV 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
L + K + EL +ED+ LIEER ARKNKD++++D+IR +L + I L D
Sbjct: 404 L-GVPLKGKQHDELLDEDIEALIEERNQARKNKDYARADEIRDELKAQNIILED 456
>gi|384049289|ref|YP_005497306.1| cysteinyl-tRNA synthetase [Bacillus megaterium WSH-002]
gi|345446980|gb|AEN91997.1| Cysteinyl-tRNA synthetase, class Ia [Bacillus megaterium WSH-002]
Length = 465
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 236/424 (55%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ A +LGE+ +++NR+ Y D + L C PRV+++M+ I + I +++
Sbjct: 74 KLIKAAKELGEDVPTIANRFIDAYFEDTSALGCKHADVHPRVTENMDIIIEFIDELVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV++ K YG+LS Q ++ ++G R+ V +K +P DF LWKA K GE +
Sbjct: 134 YAYESEGDVYYRTRKFEGYGKLSHQSIDELQSGARIEVGEKKEDPLDFTLWKATKDGEIA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A S Y
Sbjct: 194 WDSPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTGKSFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NY+ L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKKHDPSLLRFFILSVHYRHPINYNEEILENTR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTSHIL 299
++ LQ L+ E T A+E + + +LR+ F M DD NT++ +
Sbjct: 314 KG----FERLQTAYGNLTHRLE-AATNLQEDASEWFEKLKELRETFIEEMDDDFNTANAI 368
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIE---SLRKIENEVKEVLRILGLLPPGAYS 356
+ F+ A KQ L L+E S IE VKE LG +
Sbjct: 369 SVLFELA----------------KQANLYLLEQTTSTDVIEAFVKE-FEELGAAIGITFG 411
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
E A L +E++ QLI++R ARK+++F +DQIR +L K I L D +
Sbjct: 412 E------------AGLLDEEIDQLIQDRIQARKDRNFQLADQIRDELKAKNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|159905981|ref|YP_001549643.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
gi|229558715|sp|A9AAN8.1|SYC_METM6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|159887474|gb|ABX02411.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
Length = 476
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/419 (39%), Positives = 228/419 (54%), Gaps = 28/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ G+NP LS ++ +L DM L+ P P+V++H+ +I I ++I
Sbjct: 73 KIIKRANENGKNPKELSEQFITVFLNDMTTLKVKPADIYPKVTEHIPEIIAFIEKLIEKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY E V+F V+K NYG+LS LE+ +G R+ K+NP DFALWK AK GEP
Sbjct: 133 FAYETENGVYFEVKKFENYGKLSNINLEDLFSGVRIETSEEKKNPEDFALWKTAKPGEPK 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SP+ GRPGWHIECSAMS+ YL +FDIHGGG DL FPHHENEIAQS A V+Y
Sbjct: 193 WKSPFVEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIAQSVAYSGKDWVNY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H G V N EKMSKSLGNF TI I++ Y P LR F I HYRSP++Y+ +
Sbjct: 253 WLHTGFVMVNGEKMSKSLGNFVTIEGISKEYDPEILRFFFIQRHYRSPIDYTAESITHVK 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE----DCINKLRDEFHARMSDDLNTSH 297
+ + IY +++ ++L E + +R+ E D + + F+ M+ D NT
Sbjct: 313 NNLEKIYNVIENIRISL----EKSEKSRVWGENEVLLYDILKNSKRNFYEAMNSDFNTVE 368
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L F+ + +N L+++ K P + L KI E I GL Y +
Sbjct: 369 ALKSVFEVS-NGVNKYLSLV--KTPSEGLLLKAFDFFKIVGE------IFGLFE--NYFK 417
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ D EE + LIE R+ R K++ SD+IR L G + D KE
Sbjct: 418 TSSESDD---------EEFIKFLIELRSDLRLQKNYEMSDKIRDGLKNLGYQIEDNPKE 467
>gi|386727442|ref|YP_006193768.1| cysteinyl-tRNA synthetase [Paenibacillus mucilaginosus K02]
gi|384094567|gb|AFH66003.1| cysteinyl-tRNA synthetase [Paenibacillus mucilaginosus K02]
Length = 465
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 230/420 (54%), Gaps = 31/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+A+D+G +++ + Q+Y D L T PRV+ +M +I + I+ +
Sbjct: 74 KLIRKASDMGMTVPEVADLFVQKYYEDTKGLGVREATLHPRVTQNMTEIIEFISGLEEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F P YG+LS Q LE + G RV VD RK NP DF LWKAAK GE S
Sbjct: 134 LAYEAGGDVYFRTRSFPEYGKLSHQNLEELQYGIRVDVDERKENPQDFVLWKAAKPGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAM +L DIHGGG DL FPHHE EIAQS + +Y
Sbjct: 194 WSSPWGEGRPGWHIECSAMVRKFLGDTIDIHGGGQDLAFPHHECEIAQSEGMTGHAMANY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG V NNEKMSKSLGN + ++ E +R+F++S HYR+PLN+S ++ A
Sbjct: 254 WMHNGFVNINNEKMSKSLGNGINVNRLLESIPSQVIRYFMLSGHYRNPLNFSDEAVEQAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
++ L++C L + + ++++F A+M+DD NT +T
Sbjct: 314 GSL----ARLENCIAGLKHRLQSAAEGDAEEEVSAAVQAVKEQFEAKMNDDFNTPDAITA 369
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLS-LIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ +N + ++ + L L+E ++ +LG+L P
Sbjct: 370 MFE----LVNFANPYAARESVRTASLQLLLEQFAAMDG-------VLGILTP-------- 410
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+D+ L ++++ QLI ER ARK+K+++++D+IR LT +GI L D + WR
Sbjct: 411 --EDEG-----LLDDEIEQLIIERTEARKSKNWARADEIRDLLTARGILLEDTAQGIRWR 463
>gi|345888163|ref|ZP_08839277.1| cysteinyl-tRNA synthetase [Bilophila sp. 4_1_30]
gi|345041019|gb|EGW45221.1| cysteinyl-tRNA synthetase [Bilophila sp. 4_1_30]
Length = 485
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/419 (37%), Positives = 239/419 (57%), Gaps = 9/419 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAND G + ++ Y + Y DM L + +P+ ++H++++ ++ ++I +
Sbjct: 72 KIIKRANDEGVSSTEIAETYIKAYHEDMDRLNVIRADIEPKATEHIQEMLNLTERLIADG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V P YG+LSG+ ++ R+G RV K +P DFALWK+AK GEP
Sbjct: 132 KAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGDEKEDPLDFALWKSAKPGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W+SPWG GRPGWHIECSAMS Y+ DIHGGG+DLIFPHHENEIAQ+ AA +
Sbjct: 192 YWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFPHHENEIAQTEAALGKPLAN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMHNG V ++EKMSKSLGNF TIR I E Y LR+FL HYRSP+++S+ +D +
Sbjct: 252 IWMHNGFVQVDSEKMSKSLGNFKTIRDILESYLAETLRYFLAGKHYRSPIDFSLDNMDES 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
+ +Y+ L++ + AL+ +E+ K + + + F + DD+NT+ +
Sbjct: 312 ERSQKRVYECLREVDKALA--RENWKPGAAPAELMEELKQQDQSFMDALEDDVNTAAAMG 369
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + I + KK + + ++++ R + +L + P + L
Sbjct: 370 HLFN--MVRIAGRVLEDKKLRNSEGGRDILKAFRDATAKWDTLLGLFAQKP----EDFLA 423
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
L++ +R L V++L+ ER AR KDF++SD R +L G+ + D + +W
Sbjct: 424 SLREIRARRRGLDMNKVVELLRERQEARAAKDFARSDAARDELAALGVEVRDTPEGPVW 482
>gi|415886300|ref|ZP_11548123.1| cysteinyl-tRNA synthetase [Bacillus methanolicus MGA3]
gi|387588953|gb|EIJ81274.1| cysteinyl-tRNA synthetase [Bacillus methanolicus MGA3]
Length = 465
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 240/422 (56%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+LGE+ +L+ R+ Y D++ L C PRV+++M+ I + I+ +I
Sbjct: 74 KIIKAANELGEDVPTLAERFINAYFEDVSALGCKKADVHPRVTENMDIIIEFISALIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F K YG+LS Q ++ RAG R+ V +K++P DFALWK+AK GE
Sbjct: 134 YAYESEGDVYFRTRKFDGYGKLSHQSIDELRAGARIEVGEKKQDPLDFALWKSAKEGEIF 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WDSPWGKGRPGWHIECSAMVKKYLGDTIDIHAGGQDLTFPHHENEIAQSEAYTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR+P+NYS L++
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFVLVNDIIKKHDPQVLRFFMLSVHYRNPINYSEELLENTK 313
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ I YQ L+ + A + E+ N + I LR++F M DD NT++
Sbjct: 314 AGLERIKTSYQNLKHRKNASTGLTEN------NQEWFNKIKSLREQFIREMDDDFNTANG 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ ++ + N ++ Q++ I+ +KE E
Sbjct: 368 ISVLFE-----LSKAANYYLLEKNTSQEV--------IDAFMKEF-------------EE 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L + L++ EL +E++ LIE+R ARKN+DF +DQIR L I L D + T
Sbjct: 402 LSSVLGLTLEKEELLDEEIEALIEQRIQARKNRDFQLADQIRDQLKDMNIILEDTPQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 459
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 226/420 (53%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L +R E D L P ++PR + H+ +I ++ ++I+N
Sbjct: 73 KIIKRALENHETCEHLVDRMVAEMYKDFDALNIQRPDFEPRATHHIPEIIALVQRLIDNG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V+ P YG+LS Q L +AG RV ++ K+NP DF LWK +K EP
Sbjct: 133 HAYVAQNGDVMFDVDSFPEYGKLSRQDLSQLQAGARVEINDIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A + V+
Sbjct: 193 SWQSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGAYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + + Y ++R+FL++AHYRS LNYS L A
Sbjct: 253 YWLHSGMIMVDKEKMSKSLGNFFTIRDVLQHYDAESVRYFLLTAHYRSQLNYSEENLKLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G A A + + + F A M DD NT L+
Sbjct: 313 HSALERLYTALR------------GTDANATAAGGE---QFIEAFKAAMDDDFNTPGALS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A LN LK +Q Q ++E+ +LGLL + +
Sbjct: 358 VLFDMA-----RELNKLKAEQNPQTD--------AFAARLRELAGVLGLLYQDPETFLQA 404
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ D K E LI +R AR NKD++ +D R L G+ + D T WR
Sbjct: 405 GMDDDETKIIE-------TLIAQRNQARANKDWATADAARDKLAAMGVVIEDGANGTTWR 457
>gi|339325369|ref|YP_004685062.1| cysteinyl-tRNA synthetase [Cupriavidus necator N-1]
gi|338165526|gb|AEI76581.1| cysteinyl-tRNA synthetase CysS [Cupriavidus necator N-1]
Length = 462
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/429 (41%), Positives = 233/429 (54%), Gaps = 53/429 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE L+ R+ Q D A L + P ++PR +D++ Q+ DMI ++
Sbjct: 75 KIIRRAAENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYVPQMLDMIGKLEARG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V K YG+LSG+ LE+ RAGERV+ + K++P DF LWK+AKA EP
Sbjct: 135 LAYQASDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVSANDAKQDPLDFVLWKSAKASEP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
WDS WG GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A
Sbjct: 195 PESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADLQFPHHENEIAQSEGASGKP 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y +R F++ AHYRSPLNYS L
Sbjct: 255 FVNMWMHNGFVRINDEKMSKSLGNFFTIREVLKSYDAEVVRFFILRAHYRSPLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR-----MSDD 292
D A A+ +Y L+D + P C DE HAR M DD
Sbjct: 315 DDARHALTRLYTALKDSQ----------------PGG--CAVDW-DEPHARRFAEAMGDD 355
Query: 293 LNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPP 352
NT ++ F D IN + + +Q +K + LGLL
Sbjct: 356 FNTPIAMSVLF-DLASEINRTGSTAAARQ------------------LKALAGTLGLLER 396
Query: 353 GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
++ + D ++ E + LI R A+ ++F+++D+IRA L GI L D
Sbjct: 397 DPHTFLQGGRSDDG-----ISPEQIETLIAARKTAKLERNFAEADRIRAQLLEAGIVLED 451
Query: 413 M-GKETIWR 420
G T WR
Sbjct: 452 KPGGATEWR 460
>gi|304438773|ref|ZP_07398701.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372775|gb|EFM26353.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 461
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 237/420 (56%), Gaps = 33/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLP-PTYQPRVSDHMEQIKDMITQIINN 60
+II RAN+ + +S RY +E+ D L T PR ++ ++++ + I + +
Sbjct: 72 KIINRANEEHVDFTEISERYIKEFKKDANGLHLYDYETINPRATEMIKEMIEFIKILESK 131
Query: 61 DCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
D AYV++GDV+F + K+ +YG+LS + ++ AG R+ V KRNP DF LWK K GEP
Sbjct: 132 DAAYVLDGDVYFDINKAKDYGKLSKKNIDELMAGARIGVAEGKRNPGDFVLWKKKKEGEP 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPW GRPGWHIECS M+ L DIH GG DL FPHHENEIAQS A + +
Sbjct: 192 SWESPWSEGRPGWHIECSVMAKTILGDTIDIHSGGEDLQFPHHENEIAQSETANGKTFAN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG + +NEKMSKS GNFFTIR++++ Y LR+FL++ HYRSP+N+S +D
Sbjct: 252 YWLHNGMINVDNEKMSKSKGNFFTIREVSKEYDLEVLRYFLLTCHYRSPINFSHEVMDQC 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y + E + E+ ++ ++ ++ F M DD+NT+ LT
Sbjct: 312 KASLERMYNAKEKLEKLI----ENANAGSLDEEVKELVDAEVKYFEDAMEDDINTADALT 367
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + +K IN+ ++ K E+L + + + ++ ++LG+L
Sbjct: 368 AIF-NIVKIINTKVDDSSK-----------ETLEYVRDSLNKLSKVLGIL---------- 405
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ K++ L E L ER ARKNKD++KSD++R L GI + D + T W+
Sbjct: 406 ERKEEGLSPEEEA------LFYERLEARKNKDYAKSDELRDKLLAMGIEVKDSREGTTWK 459
>gi|307544947|ref|YP_003897426.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
gi|307216971|emb|CBV42241.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
Length = 467
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 236/421 (56%), Gaps = 35/421 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I++RA + GE SL++R D L L P +PR + H+++I MI +I+
Sbjct: 72 KILKRAEENGETIASLTDRMIDAMHEDEGRLGVLRPDAEPRATQHVDEIVTMIQTLIDKG 131
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K +YG+L+ + ++ RAG RV V+ K +P DF LWKAAK GE
Sbjct: 132 YAYAASNGDVYYRVRKFADYGKLNNRDPDDMRAGARVDVEELKEDPLDFVLWKAAKPGEA 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWGPGRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS AA V+
Sbjct: 192 DWLSPWGPGRPGWHIECSAMSTCCLGETFDIHGGGPDLTFPHHENEIAQSEAATGKQYVN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V +EKMSKSLGNFFTIR++ E + P +R+ L+++HYRSP+NY+ L A
Sbjct: 252 TWMHAGAVRVQHEKMSKSLGNFFTIREVLEHHDPEVVRYLLVASHYRSPINYAPDSLADA 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ Y L VAL + G+ ++P+ + F M DD NT+ ++
Sbjct: 312 RKSLERFYNALDG--VALEGVETPGE---VDPSFD-------RRFIEAMDDDFNTAGAIS 359
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F + LN +K+ P+Q + E+K + +LGLL P +
Sbjct: 360 VLFD-----LARELNRARKEAPEQAP--------ALAAELKRLGGVLGLLQQEPAVF--- 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK A L+E ++ I ERA A++ +DF+++D IR +L GI L D + T
Sbjct: 404 ---LKGGA-GELPLSEAEIEARISERAEAKQARDFARADAIRDELAALGIVLKDSREGTS 459
Query: 419 W 419
W
Sbjct: 460 W 460
>gi|451817039|ref|YP_007453240.1| cysteine--tRNA ligase CysS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451783018|gb|AGF53986.1| cysteine--tRNA ligase CysS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 466
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 237/422 (56%), Gaps = 33/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I +AND G L ++Y EY D L + PR +++++ I + ++I D
Sbjct: 72 KMINKANDEGITVKELGDKYINEYYQDADALNIERASVNPRATEYIKDIIKFVEELIAAD 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+++ +K NYG+L+GQ LE+ +AG R++VD RK++P DFA+WKA K GEP+
Sbjct: 132 FAYEVDGDVYYSTKKFSNYGQLAGQNLEDLQAGARISVDERKKDPMDFAIWKAQKPGEPA 191
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS M+ L DIH GG+DL FPHHENEIAQS A +Y
Sbjct: 192 WESPWGLGRPGWHIECSCMAKKLLGDTIDIHAGGMDLKFPHHENEIAQSEAVTGKKFANY 251
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+H V +N+KMSKSL NFFT R+I + Y A+R ++S HYR +N++ LDSA
Sbjct: 252 WLHAAFVNVDNKKMSKSLNNFFTAREILQEYDADAIRFLMLSGHYRIQINFTKELLDSAK 311
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED---CINKLRDEFHARMSDDLNTSHI 298
++ + L +C L ++ ++ +D ++K R++F +M DD NT+
Sbjct: 312 ASI----ERLYNCINNLENLKDEVSKKTMDNGEDDYLKSLSKYREKFIEKMDDDFNTADA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F ++ K S E + + V+E+ + LG +
Sbjct: 368 ISVLF-----------DLAKDINNNVNINSSAELCEETKKLVRELGKPLG---------I 407
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LQ K L E ++ +LI+ R ARK++DF+ +D+IR DL + I L D +
Sbjct: 408 LQTYMKKDL------EAEIQELIDRRQQARKDRDFALADKIRDDLKSRNIILEDTPQGVR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|270263639|ref|ZP_06191908.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
gi|270042523|gb|EFA15618.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
Length = 461
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 225/422 (53%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ L+ R E D L P +PR + H+ +I ++ ++I+ D
Sbjct: 73 KIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEIIEITQRLIDRD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G A PA + F M DD NT +
Sbjct: 313 RTALERLYTALR------------GTDANAQPAGGEAFEA---RFREAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F + +N LK + + + + E++++ ++LGLL P + +
Sbjct: 358 ALFD-----LAREVNRLKGED--------MAAANGLAAELRKLAKVLGLLQQEPEQFLQS 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + E LI++R ARK KD++ +D R L I L D + T
Sbjct: 405 GAQADDGEVAEIE-------ALIKQRNDARKAKDWALADAARDRLNEMSIVLEDGPQGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|253689302|ref|YP_003018492.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511839|sp|C6DAX2.1|SYC_PECCP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251755880|gb|ACT13956.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 461
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 223/422 (52%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+ R E D L L P +PR + H+ I +M+ +I
Sbjct: 73 KIIKRAAENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHITDIIEMVETLIARR 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V+ +P YG LS Q L+ +AG RV + KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 HWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + AA ++ F M DD NT +
Sbjct: 313 RAALERLYTALRGTD---------------PDAAAQGGDEFEGRFREAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F A +N L K + Q L +LRK+ +LGLL P + +
Sbjct: 358 VLFDMA-----REVNRL-KTEDAQAANQLASALRKLSG-------VLGLLEQDPEQFLQN 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q+ + +K E LI++R AR KD++ +DQ R L GI L D + TI
Sbjct: 405 GAQVDNDEVKEIE-------ALIQQRKDARAAKDWALADQARDRLNEMGIVLEDGPQGTI 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|238762909|ref|ZP_04623877.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
gi|238698920|gb|EEP91669.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
Length = 461
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 228/422 (54%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L+ R E D L P +PR + H+ +I ++ ++I +
Sbjct: 73 KIIKRAIENNETCEQLTTRMLAEMHKDFDALNLKRPDLEPRATHHIPEIIELTERLIARE 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ G A PA + F A M DD NT +
Sbjct: 313 RASLERLYTALR------------GTDANATPAGG---AEFEARFRAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F I +N LK + + + + E++++ +LGLL P + +
Sbjct: 358 VLFD-----IAREVNRLKAED--------MTAANALAAELRKLAHVLGLLEQDPELFLQS 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + + E LI++R AR +KD++ +D R L GI L D + TI
Sbjct: 405 GAQTDDDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTI 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|421782075|ref|ZP_16218534.1| cysteine--tRNA ligase [Serratia plymuthica A30]
gi|407755631|gb|EKF65755.1| cysteine--tRNA ligase [Serratia plymuthica A30]
Length = 461
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 225/422 (53%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE+ L+ R E D L P +PR + H+ +I ++ ++I+ D
Sbjct: 73 KIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEIIEITQRLIDRD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+++ P YG LS Q L+ +AG RV +D KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ G A PA + F M DD NT +
Sbjct: 313 RTALERLYTALR------------GTDANAQPAGGEAFEA---RFREAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F + +N LK + + + + E++++ ++LGLL P + +
Sbjct: 358 ALFD-----LARDVNRLKGED--------MAAANGLAAELRKLAKVLGLLQQEPEQFLQS 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + E LI++R ARK KD++ +D R L I L D + T
Sbjct: 405 GAQADDGEVAEIE-------ALIKQRNDARKAKDWALADAARDRLNEMNIVLEDGPQGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|350531832|ref|ZP_08910773.1| cysteinyl-tRNA synthetase [Vibrio rotiferianus DAT722]
Length = 460
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 238/422 (56%), Gaps = 39/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ SL+ R E D L P +PR + + +I +++ ++I
Sbjct: 73 KIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEIIELVEKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V K YG+LS Q LE +AG RV +++ KR+P DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ ++ +P E+ +++ F A M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F A +N LK + +E ++ ++E+ ++G+L P A+
Sbjct: 358 VLFDMA-----REVNRLKTEN--------LEKASELGALMRELAEVIGILHQDPEAF--- 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK A E+ E + LI+ R +R KD++ +D R LT GI L D + T
Sbjct: 402 ---LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGPEGTT 456
Query: 419 WR 420
WR
Sbjct: 457 WR 458
>gi|407694735|ref|YP_006819523.1| cysteinyl-tRNA synthetase [Alcanivorax dieselolei B5]
gi|407252073|gb|AFT69180.1| Cysteinyl-tRNA synthetase [Alcanivorax dieselolei B5]
Length = 460
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/420 (39%), Positives = 230/420 (54%), Gaps = 37/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ A D GE+ +L+ R+ + DM L LPPT P+ +DH+ + MI +I
Sbjct: 73 KIIKAAADNGEDIGALTARFTTAFEEDMGRLNALPPTVVPKATDHIGDMLTMIETLIAKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +G V FAVE P+YG+LSG+ LE+ AG RV V KR+P DF LWK + +P
Sbjct: 133 HAYEADGHVLFAVESMPDYGKLSGRNLEDMLAGARVEVADYKRHPGDFVLWKPSSDDQPG 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSPWG GRPGWHIECSAM +L DIHGGG DLIFPHHENEIAQ C A V Y
Sbjct: 193 WDSPWGRGRPGWHIECSAMIHKHLGDVIDIHGGGQDLIFPHHENEIAQGCCAHGTEYVRY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ + EKMSKSLGNF +R++ + Y LR L+S+HYRSPLN+S LD A
Sbjct: 253 WMHNGYINIDGEKMSKSLGNFRLVRELLKEYAGEVLRFALLSSHYRSPLNFSAEVLDQAG 312
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMS--DDLNTSHIL 299
++ +Y L G+ ++ P D +L ++ ++ DDLNT+ +
Sbjct: 313 KSLDGLYYALL------------GRGEQVEP---DTGYRLPEDHPVLLALRDDLNTAEAI 357
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
+ AL + + LN K P++ L + E S+ +
Sbjct: 358 S-----ALHAVAAKLN--KADLPEKPVLKAELLAGAGLLGLLE-------------SDPV 397
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
+++ L +++ L+ ER AA+K +DF+++DQIR L GI L D + T W
Sbjct: 398 AWFQNQGSADDGLANDEIDALVAERTAAKKARDFARADQIRDQLKDAGIQLEDTREGTRW 457
>gi|417951842|ref|ZP_12594927.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
gi|342803794|gb|EGU39143.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
Length = 461
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 237/422 (56%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ SL+ R E D L P +PR ++ + +I +++ ++I
Sbjct: 73 KIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEIIELVEKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F V+K YG+LS Q LE +AG RV V+S KR+P DF LWK +K GEP
Sbjct: 133 FAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDVESAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ ++ +P E+ + + F M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDLTAAP-----------AGGEEYVTR----FSTAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F+ A +N +K + IE + + E+ I+G+L P A+ +
Sbjct: 358 VLFEMA-----REINRIKTES--------IEKASGLGALMCELADIIGILHQDPEAFLQ- 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
D A E+ E + LI+ R +R +KD++ +D R L GI L D + T
Sbjct: 404 ----GDAAGNDDEVAE--IEALIKLRNDSRASKDWANADLARDKLNELGIVLEDGPEGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|421080284|ref|ZP_15541218.1| Cysteine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
gi|401705137|gb|EJS95326.1| Cysteine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
Length = 461
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 175/426 (41%), Positives = 229/426 (53%), Gaps = 46/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+ R E D L + P +PR + H+ I +M+ +I
Sbjct: 73 KIIKRAIENGETSDQLTTRMIAEMHADFDALNIVRPDAEPRATHHIADIIEMVETLIARR 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+V+ +P YG LS Q L+ +AG RV + + KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFSVDTAPGYGALSRQDLDQLQAGARVEITAVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 HWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSRCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFT+R + Y P +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLMSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHAR----MSDDLNTS 296
++ +Y L+ ++ ++ HG DEF AR M DD NT
Sbjct: 313 RASLERLYIALRGTDLNVAA---HGG----------------DEFEARFREAMDDDFNTP 353
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGA 354
+ F A +N L K + Q L +LRK+ +LGLL P
Sbjct: 354 EAYSVLFDMA-----REVNRL-KAEDVQAANQLASALRKLSG-------VLGLLEQDPEQ 400
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
+ + Q+ + +K E LI++R AR KD++ +DQ R L GI L D
Sbjct: 401 FLQNGAQVDNDEVKEIE-------ALIQQRKDARAAKDWALADQARDRLNEMGIVLEDGS 453
Query: 415 KETIWR 420
+ TIWR
Sbjct: 454 QGTIWR 459
>gi|395495078|ref|ZP_10426657.1| cysteinyl-tRNA ligase [Pseudomonas sp. PAMC 25886]
Length = 462
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 229/420 (54%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ R D A L L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWK K GEP
Sbjct: 133 YAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDFVLWKGTKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSAINYSEDNLKDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A++P AR F M+DD T
Sbjct: 313 KGALERFYHALKGLP-AVAPAGGEAFVAR---------------FTEVMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ S +++ + +KE+ +LG+L E
Sbjct: 357 VLFE-----MVREINRLRE--------SDLDAAAGLAARLKELASVLGVLQ----MEADD 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ A R + E D LI+ R AR NKD+++SD+IR LT G+ L D T WR
Sbjct: 400 FLQAGAEGRVDAAEVDA--LIQARLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|312961737|ref|ZP_07776235.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
gi|311283996|gb|EFQ62579.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
Length = 462
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 227/423 (53%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE +L+ R D A L L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGEAFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWK K GEP
Sbjct: 133 YAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDFVLWKGTKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSAINYSEDNLKDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A++P AR F M+DD T
Sbjct: 313 KGALERFYHALKGLP-AVAPAGGEAFVAR---------------FTEVMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ S +++ + +KE+ +LG VLQ
Sbjct: 357 VLFE-----MVREINRLRE--------SDLDAAAGLAARLKELASVLG---------VLQ 394
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
D L+ D Q LI+ R AAR NKD+++SD+IR LT G+ L D T
Sbjct: 395 MEADDFLQAGAEGRVDAAQVEALIQARLAARTNKDWAESDRIRDQLTAMGVVLEDGKGGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|320162457|ref|YP_004175682.1| cysteinyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
gi|319996311|dbj|BAJ65082.1| cysteinyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
Length = 468
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 236/422 (55%), Gaps = 33/422 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA+ LG +P +L+ Y QEY ++ DL LP T PR + ++QI +I +I
Sbjct: 74 KIILRASQLGMDPFALAETYIQEYRKNLEDLNVLPATINPRATQEIDQIIAIIQGLIEKG 133
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV+F V + +YGRLSG++L+ +AG R+ V +K +P DFALWKAAK GEP
Sbjct: 134 YAYPAPNGDVYFRVTRDEDYGRLSGRKLDEMQAGARIEVGEQKEHPMDFALWKAAKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+WDSPWG GRPGWHIECSAM+ H+L + DIHGGG DLIFPHHENEIAQS +
Sbjct: 194 AWDSPWGKGRPGWHIECSAMNLHHLGEQIDIHGGGNDLIFPHHENEIAQSESYTGKPFAR 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG + EKMSKSLGN TI + R+ LR ++++ YR+PL ++
Sbjct: 254 YWVHNGMLQFGGEKMSKSLGNLVTIEEFLARHDADVLRLMVLNSGYRAPLTFN------- 306
Query: 241 SDAVFYIYQTLQDCEVALSPF--QEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
D + + L+ + AL P G +A A E+ R F M DD NT+
Sbjct: 307 DDVIEQTERALERLKSALRPALPGAAGISAEAVKALEEQARAARAGFEEAMDDDFNTAGA 366
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
L+ F+ ++ INS+ + + + E LR ++ ++E+ +LGL
Sbjct: 367 LSHLFE-LVRAINSA----------RTEGATDEQLRVGQDVLRELAGVLGLR-------- 407
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
L+ ++K + A + LIE R RK K ++ SD IR LT G+ L D + T
Sbjct: 408 LRMEEEKPQEAAPFID----LLIEVRTELRKQKLWALSDLIRDRLTALGVTLEDTREGTT 463
Query: 419 WR 420
WR
Sbjct: 464 WR 465
>gi|253577158|ref|ZP_04854478.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843402|gb|EES71430.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 468
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/419 (39%), Positives = 232/419 (55%), Gaps = 26/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+A ++ ++ + + Y D+ L T PRV+++M+ I + I +
Sbjct: 74 KLIRKAEEMNLTVPEVAEMFIKAYYEDLDGLGIPRATANPRVTENMDVIINFIRDLEQKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDVFF K P YG+LSGQ + + G R+ VD RK +P DF LWKAAK GE
Sbjct: 134 FAYESGGDVFFRTHKFPEYGKLSGQNIGELQFGIRIDVDERKEHPEDFVLWKAAKPGEIH 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECSAMS L DIHGGG DL FPHHE E+AQS AA Y
Sbjct: 194 WSSPWGEGRPGWHIECSAMSRQLLGDTLDIHGGGQDLQFPHHECEVAQSEAATGKPLARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ + EKMSKSLGN ++ + +Y A+R+F++S HYR+PLN+S + A
Sbjct: 254 WMHNGYINIDGEKMSKSLGNGVLVKDLRAQYKREAIRYFMLSTHYRNPLNFSEETMQQAE 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+V I + L+ + G+T ++ P + + +R+ FHA+M DD NT +T
Sbjct: 314 RSVERISNAANNLRHRLNTAPQGGET-KVTPEWAEKLETIRNLFHAKMQDDFNTPDAITA 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F+ S +N L +QP + L +L+ E E+ VLRI LPP
Sbjct: 373 VFEWV-----SEVNAL-LQQPVTVRGDLEAALQLFE-EMNGVLRI--ALPP--------- 414
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
EL E++ LI ERA ARK K+++++D+IR L +GI L D + WR
Sbjct: 415 -------ETELPGEEIEALIAERAEARKAKNWARADEIRDLLDARGIVLEDTPQGMRWR 466
>gi|113460388|ref|YP_718450.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|123131947|sp|Q0I1Q1.1|SYC_HAES1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|112822431|gb|ABI24520.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 459
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 234/420 (55%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRR+ + E L +R E D L L P ++PR + H+ +I ++ ++I
Sbjct: 73 KIIRRSLENRETCEQLVDRMVVEMYKDFDALNVLRPDFEPRATHHIAEIIALVEKLIARG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F VE YG+LS Q L +AG RV + K+NP DF LWK +K EP
Sbjct: 133 HAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISEIKKNPMDFVLWKMSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM+ +L FDIHGGG DL+FPHHENEIAQSC A + V+
Sbjct: 193 SWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGNRYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H+G + + EKMSKSLGNFFTIR + Y ++R+FL++AHYRS LNYS LD A
Sbjct: 253 YWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQLNYSEENLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ + + F A+ A M+DD NT + ++
Sbjct: 313 HGALERLYTALRGTDKSAVAFGGENFIAQFTEA---------------MNDDFNTPNAIS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N L K + K L LR E+ ILGLL + LQ
Sbjct: 358 VLFEMA-----REINRL-KNEDKLLADGLAARLR-------ELAGILGLLEQDP-EDFLQ 403
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
D AE+ + + LI++R AR+ KD++++D R +LT G+ L D T+WR
Sbjct: 404 AGSDD----AEIAK--IEALIKQRNDARQAKDWARADAARNELTTMGVILEDGSNGTMWR 457
>gi|409397649|ref|ZP_11248512.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
gi|409117783|gb|EKM94209.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
Length = 461
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 224/420 (53%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ L R D A L L P +PR +DH+ + MI +I+
Sbjct: 74 KIIKRANENGESFQDLVARMIAAMHEDEARLNVLRPDIEPRATDHIAGMHAMIQTLIDKG 133
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ + G R+ VD K +P DF LWK AK GEP
Sbjct: 134 FAYAPGNGDVYYRVGKFAGYGKLSRRKIEDLKIGARIEVDEAKEDPLDFVLWKGAKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS AA +
Sbjct: 194 SWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATGKLYAN 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYRSP+NYS L A
Sbjct: 254 AWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSPINYSEDSLREA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A PA + L + F A M DD N+
Sbjct: 314 KGALERFYNGLKGLPEA-------------APAGGEA---LVERFGAAMDDDFNSPEACA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L+ E+ VL +L L P E
Sbjct: 358 VLFE-----MIREVNRLRDSDLNAAAALAARL-----KELAGVLGVLQLDP-----EAFL 402
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
Q A ++ +V LI R AAR K++++SD+IR LT G+ L D T WR
Sbjct: 403 Q----AGAAGKVDAAEVEALIGARLAARAEKNWAESDRIRDQLTAMGVVLEDGKGGTTWR 458
>gi|414070586|ref|ZP_11406569.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
gi|410807040|gb|EKS13023.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
Length = 459
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 176/423 (41%), Positives = 228/423 (53%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ L+ R + D L L P +P V+ HM++I M+ ++I
Sbjct: 73 KIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEIIVMVKRLIEKG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F V YG LS Q L ++G RV V K +P DF LWK AKAGEP
Sbjct: 133 HAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPLDFVLWKKAKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAMS+ +L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHENEIAQSCCANNGKYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
W+H G V N EKMSKSL NFFT+R++ + Y ++R+FLIS HYRS LNYS LD A
Sbjct: 253 TWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISGHYRSQLNYSQENLDQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ IY L+D E + N+ +F M DD NT L
Sbjct: 313 RSSLERIYTALRDVEPVECDLEG---------------NEFVAKFRKAMDDDFNTPEALP 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQ-QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
F+ + LN +K+ Q QL+ I LR I N +LG V
Sbjct: 358 VLFE-----LAKELNRVKESDVVQAGQLAFI--LRSIGN-------VLG---------VA 394
Query: 360 QQLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
QQ + L+ + E + LI +R AR +KD++ +D+ R L G+ L D +T
Sbjct: 395 QQAPEAFLQGGQDDGEVATIEALIVKRNEARTSKDWAAADEARDALNALGVILEDSAGKT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|89100736|ref|ZP_01173591.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
gi|89084553|gb|EAR63699.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
Length = 465
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 236/422 (55%), Gaps = 35/422 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR A +LGE+ S++ R+ Y D++ L C PRV++ M+ I I +I
Sbjct: 74 KLIRAAKELGEDVPSIAERFIDAYFEDVSALGCKRADVHPRVTESMDLIIQFIEALIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY GDV+F + YG+LS Q ++ R G R+AV +K++ DFALWK AK GE S
Sbjct: 134 FAYESNGDVYFHTRRFDEYGKLSQQSIDELRVGARIAVGEKKQDALDFALWKTAKEGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLSFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ NNEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WMHNGYININNEKMSKSLGNFVLVHDIIKKHDPQVLRFFMLSVHYRHPINYSDELLENTR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD---EFHARMSDDLNTSHI 298
+ I + Q+ L+ +E +A + + + K+ D EF M DD NT++
Sbjct: 314 SGLERITTSYQN----LAHRKE--ASAELTDNNSEWLKKIEDLHGEFIKEMDDDFNTANG 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F+ + + ++ +L+ K + +IE+ K E + + +LGL
Sbjct: 368 ISVLFELSRQ---ANYYLLE----KNTSVEVIEAFMK---EFEILFDVLGL--------- 408
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+L EL ++++ LIE+R ARK ++F SDQIR L I L D + T
Sbjct: 409 -------SLGGEELLDDEIDALIEKRNQARKERNFQLSDQIRDQLKEMNIILEDTAQGTR 461
Query: 419 WR 420
W+
Sbjct: 462 WK 463
>gi|388569689|ref|ZP_10156078.1| cysteinyl-tRNA synthetase [Hydrogenophaga sp. PBC]
gi|388263112|gb|EIK88713.1| cysteinyl-tRNA synthetase [Hydrogenophaga sp. PBC]
Length = 477
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 177/426 (41%), Positives = 233/426 (54%), Gaps = 50/426 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA GE+ +L++R D L PT+ PR +D++ Q+ D++ ++ +
Sbjct: 91 KIIRRAVQNGESVRALTDRMIAAMYEDFDALGIARPTHDPRATDYVPQMLDIVRRLEERN 150
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV + P YG+LSG+ L+ AGERVAV K +P DF LWKAAK EP
Sbjct: 151 LAYRSGDGDVNYAVRRFPGYGKLSGKTLDELNAGERVAVAQGKDDPLDFVLWKAAKPEEP 210
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
+ WDSP+G GRPGWHIECSAMS L FDIHGGG DL FPHHENEIAQS A
Sbjct: 211 ADAQWDSPYGRGRPGWHIECSAMSCALLGETFDIHGGGADLQFPHHENEIAQSEGANGVP 270
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
WMHNG V +NEKMSKSLGNFFTIR++ +RY +R F++ AHYRSPLN+S L
Sbjct: 271 LAKVWMHNGFVNVDNEKMSKSLGNFFTIREVLQRYDAETVRFFMLRAHYRSPLNHSDAHL 330
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A A+ +Y L + A A D + F A M DD NT
Sbjct: 331 DDARAALKRLYTALSAVKAA--------------DVAMDWADPFAARFKAAMDDDFNTPV 376
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L+ F + S +N + K P+Q L LR + +LGL
Sbjct: 377 ALSVLFD-----LASEIN--RGKDPRQAGL-----LRALGG-------VLGL-------- 409
Query: 358 VLQQLKDKALKRAELTEEDVLQLIE----ERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
LQ K L+ ++E V +IE +RA+A+ +DF+++D+IR +L GI L D
Sbjct: 410 -LQADPVKYLQGGGASDELVGAVIEAKIADRASAKLARDFAEADRIRKELLDAGIVLKDS 468
Query: 414 GKETIW 419
T W
Sbjct: 469 AAGTTW 474
>gi|331003582|ref|ZP_08327079.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330412423|gb|EGG91814.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 469
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 239/426 (56%), Gaps = 37/426 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +A + G +S RY E DM + LP T P ++ ++ +++MI +I
Sbjct: 72 KIINKAIEEGVEASVISTRYIDECKKDMEAMNVLPATKNPLATEEIDGMEEMIGSLIEKG 131
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKA 117
AYV +G V+F V+ +YG+LS + ++ ++G R V + K + DF LWK K
Sbjct: 132 HAYVAKDGTVYFRVKSFEDYGKLSHKNIDELQSGFREIKVKGEEDKEDSNDFVLWKPKKD 191
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
GEP WDSPW GRPGWHIECS MS YL + DIHGGG DLIFPHHENEIAQS +A S
Sbjct: 192 GEPYWDSPWSKGRPGWHIECSVMSKKYLGDQIDIHGGGEDLIFPHHENEIAQSESASGKS 251
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
+YWMHN + +N+KMSKSLGNFFT+R I+E+Y LR F++SAHYRSPLN+S +
Sbjct: 252 FANYWMHNAFLNIDNKKMSKSLGNFFTVRDISEKYDLQVLRFFMLSAHYRSPLNFSAELM 311
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA---EDCINKLRDEFHARMSDDLN 294
+++ +++ I +++ + Q+ I A + L+D+F M DD N
Sbjct: 312 EASKNSLERILTGVEN----IKDVQKRNNADAITDAELSNLEIAKVLKDKFVIAMDDDFN 367
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T+ +T F+ +K N+SLN + S +E + N + + LG++
Sbjct: 368 TADAITAIFE-LIKLSNTSLN----------EKSTVEYANGLLNIILPLCDTLGIITE-- 414
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 414
++ E+ + ++ LIE+R +ARKNKDF+ +D+IR +L GI L D
Sbjct: 415 -------------RKVEILDSEIEDLIEQRTSARKNKDFALADKIRNELLEMGIVLEDTR 461
Query: 415 KETIWR 420
+ W+
Sbjct: 462 EGVKWK 467
>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
gi|109894895|sp|Q47HK6.1|SYC_DECAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
Length = 456
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 179/424 (42%), Positives = 244/424 (57%), Gaps = 47/424 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+NR+ D L P Y+PR ++++ ++ D+I ++ N
Sbjct: 73 KIIKRAIENGETIQQLTNRFIAFMHEDADALGVQRPDYEPRATEYVPEMLDLIGKLEANG 132
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV K P YG+LSG+ L++ RAGERV VDS K++P DF LWK AK GEP
Sbjct: 133 LAYQASDGDVNYAVRKFPGYGKLSGKSLDDLRAGERVEVDSAKQDPLDFVLWKHAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAMS+ L FDIHGGG DL FPHHENEIAQS A + V+
Sbjct: 193 AWQSPWGDGRPGWHIECSAMSSKLLGQHFDIHGGGQDLQFPHHENEIAQSEGANCCNFVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG V +NEKMSKSLGNFFTIR + E++ +R F++ AHYRSPLNYS LD A
Sbjct: 253 YWMHNGFVRVDNEKMSKSLGNFFTIRTVLEQFDAEVVRFFILRAHYRSPLNYSDAHLDDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC--INKLRDEFHARMSDDLNTSHI 298
++ +Y L+D + PAA D N+ F A +++D ++
Sbjct: 313 RRSLDSLYFALRD----------------VPPAAADIDWSNEFAGRFAAALNEDFDSHGA 356
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYS 356
+ F+ A + + K LS + +K + ++GLL P AY
Sbjct: 357 IAVLFELAAEV----------NRQKSAGLSCL---------LKGLGGVIGLLEREPSAYL 397
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ L E V Q+I +RAAA+K K+F+++D+IR +L GI L D +
Sbjct: 398 Q-------GGAGVGGLDEAAVGQMIVDRAAAKKAKNFAEADRIRDELKAAGIILDDSPQG 450
Query: 417 TIWR 420
T WR
Sbjct: 451 TTWR 454
>gi|225181302|ref|ZP_03734747.1| cysteinyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225168082|gb|EEG76888.1| cysteinyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 469
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 230/423 (54%), Gaps = 33/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+RAN+LG L+ RY + Y D+ L P P+ ++H+E++ ++I ++
Sbjct: 74 KMIKRANELGITVPELAERYIEAYFEDVEALGVEPADEHPKATEHIEEMVELIQKLEAKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V+GDV+F NYG LS Q L+ +G RV VD RK++P DF LWK K GEP+
Sbjct: 134 MAYEVDGDVYFHTPAFDNYGELSHQPLDELESGARVDVDERKKHPLDFVLWKKQKPGEPA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECS MS+ YL DIH GG DLIFPHHENE AQS A Y
Sbjct: 194 WESPWGKGRPGWHIECSVMSSKYLGDTLDIHAGGPDLIFPHHENEKAQSEGATGQPFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYS---VLQLD 238
W+H G++ N EKMSKSLGNF T+R+I ++ P +R F++SAHYR+P+NYS + Q
Sbjct: 254 WLHAGYLNINQEKMSKSLGNFMTVREIRKQIDPQIVRFFMLSAHYRNPINYSPDLLEQAK 313
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
S D + + L+D L Q A AA + R F M DD NT+
Sbjct: 314 SGLDRLNNVVYNLRDLLEKLPEGQGDSADATERLAA---LEAHRGRFVEAMDDDFNTADG 370
Query: 299 LTGAFQDALKFINSSL-NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
L F D + N+ L N +Q ++ L+L E L +LG
Sbjct: 371 LAVLF-DVARETNAYLKNAQVSRQVVEKTLALFEELGS----------VLGF-------- 411
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q+ D+ L + V ++IE+R AARK KD++ +D IR L GI L D +
Sbjct: 412 -FQKQDDEDL------DATVNEMIEKRQAARKEKDWATADAIRDQLQAMGIVLEDTPQGI 464
Query: 418 IWR 420
WR
Sbjct: 465 RWR 467
>gi|373493798|ref|ZP_09584408.1| cysteinyl-tRNA synthetase [Eubacterium infirmum F0142]
gi|371969503|gb|EHO86948.1| cysteinyl-tRNA synthetase [Eubacterium infirmum F0142]
Length = 468
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 161/415 (38%), Positives = 225/415 (54%), Gaps = 35/415 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA D G + L +S RY +EY D L P+VS+H+++I++ + ++
Sbjct: 72 KIINRAKDEGVSALEISERYIKEYFDDADALNVRRADVHPKVSEHIDEIENFVDTLVGKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKA-GEP 120
AY +GDV+F+ K P YG+LSGQ +E+ AG R+AV K +P DFALWKA K E
Sbjct: 132 FAYEADGDVYFSTRKFPEYGKLSGQNIEDLEAGARIAVGEVKEDPIDFALWKARKTEDEI 191
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAM+ +L DIHGGG DL FPHHENEIAQS S +
Sbjct: 192 AWESPWGMGRPGWHIECSAMARRHLGKTIDIHGGGEDLQFPHHENEIAQSECCNGVSFAN 251
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMHNG + KMSKS GNFFT+R I +Y +R L+S YR P+ +S + +
Sbjct: 252 YWMHNGFINIGGSKMSKSAGNFFTVRDIRRKYTGEEIRFLLLSGQYRGPIEFSEEMMQQS 311
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK---LRDEFHARMSDDLNTSH 297
+ I L D E + G +++ E ++K R F M DDLNT+
Sbjct: 312 RSSFNRIKNCLDDIEFMIKT----GTDEKLSAEEEKSVDKFDDFRQAFIKAMDDDLNTAD 367
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
++ F+ I ML+ K S ++ I NE+ VL I+
Sbjct: 368 GISAVFE----LITEINTMLRGGTSK----SYAKAALDIFNELTGVLGII---------- 409
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+ K+ + + D+ L+EER ARKNKDF+++D+IR +L +G L D
Sbjct: 410 ---KAKETNI------DADIEALVEERQQARKNKDFARADEIRDELKARGYTLKD 455
>gi|340758451|ref|ZP_08695038.1| cysteinyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
gi|251836766|gb|EES65300.1| cysteinyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
Length = 473
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 164/420 (39%), Positives = 241/420 (57%), Gaps = 23/420 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPP-TYQPRVSDHMEQIKDMITQIINN 60
++IRRAN+ G + ++ +Y + Y D + + +P+ ++H+ + ++I +I
Sbjct: 73 KMIRRANEEGVSLKDIAEKYIKAYFEDTSKVNLKEAGMIRPKATEHIGDMIEIIQNLIEK 132
Query: 61 DCAYVVEGDVFFAVEKSPN-YGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGE 119
AY EGDV+F VEK + YG LS Q +E+ ++G R+ V K++P DFALWKAAK GE
Sbjct: 133 GYAYEAEGDVYFNVEKYKDGYGALSKQNVEDLKSGARIEVADIKKSPVDFALWKAAKEGE 192
Query: 120 PSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNV 179
PSWDSPWG GRPGWHIECSAMS YL FDIHGGG DLIFPHHENEIAQS +C
Sbjct: 193 PSWDSPWGKGRPGWHIECSAMSHRYLGDTFDIHGGGQDLIFPHHENEIAQSKCSCGGEFA 252
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
YWMHNG++ N EKMSKS G F +RQ+ E++ +R F++ AHYR P+++S +L+
Sbjct: 253 RYWMHNGYININGEKMSKS-GTFMLLRQVLEQFEGRVIRLFILGAHYRKPMDFSNYELNQ 311
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A ++ I L + AL+ + G A + + ++F M DD NT+ L
Sbjct: 312 AKSSLERIENALLRAKDALAADTKEGGADCAELA--EVLKSSSEKFVTAMDDDFNTAQGL 369
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVL 359
GA + +K +N +L K + + ++ E++ + N ++EVL ++ L +EV
Sbjct: 370 -GAIFELIKELNKALE--GDKLSAKGKETVKETVDYVVNIMQEVLGVILKLD----NEV- 421
Query: 360 QQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 419
LT E V ++E R AR +K+++ SD+IR L GI + D T W
Sbjct: 422 ----------GNLTSELVEFILEMRREARADKNWAMSDKIRDRLAEMGIKIKDGKDTTTW 471
>gi|397687288|ref|YP_006524607.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
gi|395808844|gb|AFN78249.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
Length = 460
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 174/423 (41%), Positives = 227/423 (53%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRAN+ GE +L R D A L L P +PR + H++ + MI +I+
Sbjct: 73 KIIRRANENGEPFEALVERMIAAMHEDEARLNVLRPDVEPRATQHIDGMFAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +R+E+ + G R+ VD K +P DF LWKAAK GEP
Sbjct: 133 YAYAPGNGDVYYRVGKFVGYGKLSRRRIEDLKIGARIEVDEAKEDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS AA +
Sbjct: 193 SWQSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATGKQYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V + EKMSKSLGNFFTIR++ E+Y P +R+ L+S+HYRSP+NYS L A
Sbjct: 253 AWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYQPEVVRYLLVSSHYRSPINYSEDSLKEA 312
Query: 241 SDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A+ Y L+ EVA + E+ + + F A M DD N+
Sbjct: 313 KGALERFYTALRGLPEVAAA-------------GGENFVER----FGAAMDDDFNSPEAC 355
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSE 357
F A +N L+ P+ +KE+ +LG+L P +
Sbjct: 356 AVLFDMA-----REINRLRDADPQAAAAL--------AARLKELGNLLGVLQMNPDVF-- 400
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
LQ + + AE V LI R AR K++++SD+IR LT G+ L D T
Sbjct: 401 -LQAGAEGKVDAAE-----VEALIAARLQARAEKNWAESDRIRDQLTAMGVVLEDGKGGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|385787638|ref|YP_005818747.1| cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
gi|310766910|gb|ADP11860.1| Cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
Length = 462
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 228/423 (53%), Gaps = 39/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RAN+ GE+ L+NR E D A L LPP +PR + H+ +I +++ ++I +
Sbjct: 73 KIIKRANENGESIERLTNRMIDEMHQDFAALNILPPDLEPRATRHIAEIIELVEKLITRE 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSR-KRNPADFALWKAAKAGE 119
AYV GDV F+V+ P YG LS Q L+ +AG RV V + KRNP DF LWK +KA E
Sbjct: 133 HAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAADVKRNPMDFVLWKMSKADE 192
Query: 120 PSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNV 179
P W SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQS A V
Sbjct: 193 PGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYV 252
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
+YWMH+G V + EKMSKSL NFFT+R + + Y +R+FL+S HYRS LNY L+
Sbjct: 253 NYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLMSGHYRSQLNYGEDNLNQ 312
Query: 240 ASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHIL 299
A A+ +Y L++ + +P AR F M DD NT
Sbjct: 313 ARSALERLYIALRNTDTRATPAGGEEFEAR---------------FREAMDDDFNTPEAY 357
Query: 300 TGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSE 357
+ F + +N +K + P L LR + +LGLL P + +
Sbjct: 358 SALFD-----LAREVNRMKGEDPAAAD-GLAARLRVLGG-------VLGLLEQDPEQFLQ 404
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ D+ + + E LI+ R ARK K+++++D R L GI L D T
Sbjct: 405 SGVNINDEEVAQIE-------ALIQMRIDARKEKNWAQADVARDRLNEMGIVLEDGAGGT 457
Query: 418 IWR 420
WR
Sbjct: 458 RWR 460
>gi|395235526|ref|ZP_10413735.1| cysteinyl-tRNA synthetase [Enterobacter sp. Ag1]
gi|394729760|gb|EJF29694.1| cysteinyl-tRNA synthetase [Enterobacter sp. Ag1]
Length = 461
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 229/422 (54%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA++ GE+ ++L +R E D L P +PR + H+ +I +++ Q++ D
Sbjct: 73 KIIKRAHENGEDFVALVDRMVVEMHKDFDALNISRPNSEPRATKHIPEIIEIVEQLLARD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV E GDV F+V PNYG LS Q L+ +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVAENGDVMFSVLTDPNYGLLSRQDLDQLQAGARVDVVDVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 AWTSPWGEGRPGWHIECSAMNCKELGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGEYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +L+ + +++P AR F M DD NT +
Sbjct: 313 RSALERLYTSLRGTDSSVAPAGGEAFEAR---------------FREAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F A +N LK + ++++ ILGLL P + +
Sbjct: 358 VLFDMA-----REVNRLKAEDLAAANGL--------AAALRKLSAILGLLEQDPEQFLQG 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D + E LI++R AR++KD++ +DQ R L GI L D T
Sbjct: 405 GAQADDGEVAEIE-------ALIKQRNDARQSKDWALADQARDRLNEMGIVLEDGAGGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|410092099|ref|ZP_11288640.1| cysteinyl-tRNA ligase [Pseudomonas viridiflava UASWS0038]
gi|409760592|gb|EKN45723.1| cysteinyl-tRNA ligase [Pseudomonas viridiflava UASWS0038]
Length = 460
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 224/420 (53%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA D GE+ +L+ R D A L L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIAGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K +P DF LWK K GEP
Sbjct: 133 YAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDESKDDPLDFVLWKGVKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWGPGRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWDSPWGPGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
W+H G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS +NYS L +
Sbjct: 253 AWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSAINYSEDSLRES 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ V+ P + + F A M+DD T
Sbjct: 313 KAALERFYHALKGLPVS-------------EPVGGEA---FVERFTAAMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ P +K++ +LG+L E
Sbjct: 357 VLFE-----MVREVNRLRETDPAAAAGL--------AARLKQLASVLGVLQ----LEADD 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ A R + E V LI+ R AAR KD+++SD+IR +T G+ L D T WR
Sbjct: 400 FLRAGAEGRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVVLEDGKGGTTWR 457
>gi|255659332|ref|ZP_05404741.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
gi|260848414|gb|EEX68421.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
Length = 477
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 235/422 (55%), Gaps = 22/422 (5%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II AN G +S+RY + Y M L PRVS+ M +I M+ ++I+
Sbjct: 73 KIINAANKEGVTWKDISDRYIKAYFEAMDALNVRHADVYPRVSETMPEIIAMVQKLIDKG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV++ GDV+++VEK +YG+LSG+ L++ +AG R+ V++ K +P DFALWKAAK GEP
Sbjct: 133 YAYVIDNGDVYYSVEKFSHYGKLSGRSLDDMQAGARIEVNTAKHHPMDFALWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQD--SN 178
SWDSPWG GRPGWHIECS MS YL KFD HGGG DLIFPHHENEIAQS A D S
Sbjct: 193 SWDSPWGKGRPGWHIECSTMSLKYLGKKFDFHGGGSDLIFPHHENEIAQSQACIGDDHSF 252
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YW+HNG +T +NEKMSKS NFFT++ I + Y +R F++ HYRSPL++S +L
Sbjct: 253 AQYWLHNGFITIHNEKMSKSKNNFFTVKDILKEYPGEVIRFFILQTHYRSPLDFSDERLK 312
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
A ++ LQ+ + + + +LR F+ M DD NT+
Sbjct: 313 EAQTSL----GRLQNTKAYVDELSAKQGESDTAAELAAKAEELRKAFYEAMDDDFNTALA 368
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
++ F ++ +N+ ++ + +K+ E+ I+G+
Sbjct: 369 ISQMFA-----LSKDINIYYQEVVNGTKAFDAADFKKVAAVYAEMAEIIGIF-------- 415
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
+ ++KA LT++ + +I R ARK K+++ +D+IR L G+ L D
Sbjct: 416 --EQQEKAAADDGLTDKLMEIIITLRQDARKEKNWAVADKIRDALKDAGVVLEDTPSGVR 473
Query: 419 WR 420
W+
Sbjct: 474 WK 475
>gi|148548000|ref|YP_001268102.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
gi|187629852|sp|A5W458.1|SYC_PSEP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148512058|gb|ABQ78918.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
Length = 460
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 224/423 (52%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE +L+ R D L LPP +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWK K GEP
Sbjct: 133 YAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQDPLDFVLWKGVKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA +
Sbjct: 193 SWESPWGPGRPGWHIECSVMSTRCLGESFDIHGGGSDLEFPHHENEIAQSEAATGKQYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+++HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSAINYSEDSLRDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ L G A + + F M+DD T
Sbjct: 313 KGALERFYHALR----GLPRVAAKGGEAFV------------ERFSVAMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F + +N L+ P E+ + ++E+ +LG VLQ
Sbjct: 357 VLFD-----LVREINRLRDSDP--------EAAAGLAGRLRELGDVLG---------VLQ 394
Query: 361 QLKDKALK---RAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
D L+ ++ +V LI+ R AR +K++++SD+IR LT G+ L D T
Sbjct: 395 LEADDFLRAGAEGKVDAAEVEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDSKGTT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|260902702|ref|ZP_05911097.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|308108249|gb|EFO45789.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
Length = 460
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 237/420 (56%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ SL+ R + D L P +PR + + +I +++ ++I
Sbjct: 73 KIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFISEIIELVEKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQSCCAHDTKYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ ++ +P E+ +++ F A M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK + +E ++ ++E+ ++G+L Y +
Sbjct: 358 VLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGIL----YQDPEA 400
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
LK A E+ E + LI+ R +R +KD++ +D R LT GI L D + T WR
Sbjct: 401 FLKGNAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|300721928|ref|YP_003711208.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
gi|297628425|emb|CBJ88990.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
Length = 460
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 231/423 (54%), Gaps = 41/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ L+ R E D L L P +PR + H+++I ++ +I
Sbjct: 73 KIIKRAIENNESCDDLTTRMLAEMHNDFDALNILRPDSEPRATHHIQEIIEITETLIERG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+++ +P+YG LS Q LE +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVAANGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEVADVKRNPMDFVLWKMSKQGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGTGRPGWHIECSAMNGKTLGHHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNY+ L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTIRDVLGYYDAETVRYFLLSGHYRSQLNYTEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ + + P G AR A M+DD NT +
Sbjct: 313 RTSLERLYTSLRGTDKSAQPAGGAGFEARFTEA---------------MNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK + I + + E++++ ILGL L+
Sbjct: 358 VLFDMA-----REINRLKAED--------IVAANGLAAELRKLAGILGL---------LE 395
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
Q + L+ ++DV Q LI++R ARKNK+++ +D R L GI L D + T
Sbjct: 396 QEPEHFLQGGAQVDDDVAQIEALIKQRNDARKNKEWALADAARNQLNELGIELEDGPQGT 455
Query: 418 IWR 420
WR
Sbjct: 456 TWR 458
>gi|223042919|ref|ZP_03612967.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|417907416|ref|ZP_12551189.1| cysteine--tRNA ligase [Staphylococcus capitis VCU116]
gi|222443773|gb|EEE49870.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|341596309|gb|EGS38925.1| cysteine--tRNA ligase [Staphylococcus capitis VCU116]
Length = 466
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 161/414 (38%), Positives = 232/414 (56%), Gaps = 33/414 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I R+ +L E+ ++ +Y + + D+ L T PRV +HM++I D I ++++
Sbjct: 73 KLINRSKELNESVPEIAEKYIKAFYEDVGALNVKKATSNPRVMNHMQEIIDFIKELVDEG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F + YG+LS Q L++ + G R+ +K + DF LWK AK GE S
Sbjct: 133 YAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQKEDALDFTLWKKAKPGEIS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSP+G GRPGWHIECS M+ H L + DIH GG DL FPHHENEIAQS A +Y
Sbjct: 193 WDSPFGKGRPGWHIECSVMAYHELGATIDIHAGGSDLQFPHHENEIAQSEAHNHAPFANY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + +NEKMSKSLGNF + I + P LR F+IS HYRSP+NY++ + +A
Sbjct: 253 WMHNGFINIDNEKMSKSLGNFILVHDIIKEIDPDVLRFFMISVHYRSPINYNLELVGAAR 312
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ I Y+ +++ E + +EH + D I + +F A M DD NT++
Sbjct: 313 SGLERIRNSYKLIEEREAIATDLEEHSEYI-------DQIETILRQFEAVMDDDFNTANA 365
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + L L K + S K+ + KEV +I +S+V
Sbjct: 366 VTAWY---------DLAKLANKYVLENTTST-----KVLHRFKEVYQI--------FSDV 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
L + K EL +ED+ +LIEER ARKNKDF+++D+IR L + I L D
Sbjct: 404 L-GVPLKGKNENELLDEDIEKLIEERNEARKNKDFARADEIRDMLKERNIILED 456
>gi|319654847|ref|ZP_08008922.1| cysteinyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
gi|317393410|gb|EFV74173.1| cysteinyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
Length = 467
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 235/424 (55%), Gaps = 37/424 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR AN+LG + S++ R+ Y D++ L C PRV++ ++ I + I +I+
Sbjct: 74 KLIRVANELGTDVPSIAERFINAYFEDVSALGCRKADVHPRVTESIDIIIEFIQTLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV++ K YG+LS Q ++ R G R+AV +K++ DF LWKAAK GE +
Sbjct: 134 FAYESEGDVYYHTRKFDEYGKLSHQSIDELRVGARIAVGEKKQDSLDFVLWKAAKEGEIA 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ YL DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLSFPHHENEIAQSEALTGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFVLVHDIIQKHDPQVLRFFMLSVHYRHPINYSDELLENTR 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-----DCINKLRDEFHARMSDDLNTS 296
+ I + + +H K A +N D I L ++F M DD NT+
Sbjct: 314 TGLERIKTSYHNL--------QHRKEASVNLTDNNQEWLDKITSLHEQFIQDMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F+ + K N L K + +I++ K E + + +LGL
Sbjct: 366 NAVSILFELS-KLANYYL------MEKNTAVEVIDAFTK---EFETLFDVLGL------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
L++ A+L +E++ QLIE+R ARK ++F +D+IR L I L D +
Sbjct: 409 -SLEE------TNADLLDEEIEQLIEQRQQARKERNFELADKIRDQLKEMNIILEDTPQG 461
Query: 417 TIWR 420
W+
Sbjct: 462 IRWK 465
>gi|254229902|ref|ZP_04923306.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262394608|ref|YP_003286462.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451970383|ref|ZP_21923610.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
gi|151937606|gb|EDN56460.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262338202|gb|ACY51997.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451933897|gb|EMD81564.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
Length = 460
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 237/422 (56%), Gaps = 39/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ SL+ R E D L P +PR + + +I +++ ++I
Sbjct: 73 KIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDIEPRATQFIPEIIELVQKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR+P DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEVRKFDEYGKLSKQDLDQLQAGARVDVETAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFPHHENEIAQSCCAHDTKYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEENLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ ++ +P E+ +++ F A M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEV 358
F A +N LK + +E ++ ++E+ ++G+L P A+
Sbjct: 358 VLFDMA-----REVNRLKTEN--------LEKASELGALMRELADVIGILHQDPEAF--- 401
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
LK A E+ E + LI+ R +R KD++ +D R LT GI L D + T
Sbjct: 402 ---LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGPEGTT 456
Query: 419 WR 420
WR
Sbjct: 457 WR 458
>gi|28897924|ref|NP_797529.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|260364387|ref|ZP_05777025.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|260877081|ref|ZP_05889436.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|260895742|ref|ZP_05904238.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|417320155|ref|ZP_12106701.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
gi|31076996|sp|Q87QJ9.1|SYC_VIBPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|28806138|dbj|BAC59413.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|308088338|gb|EFO38033.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|308093754|gb|EFO43449.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|308115166|gb|EFO52706.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|328473118|gb|EGF43966.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
Length = 460
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 237/420 (56%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ SL+ R + D L P +PR + + +I +++ ++I
Sbjct: 73 KIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFIAEIIELVEKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQSCCAHDTKYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ ++ +P E+ +++ F A M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK + +E ++ ++E+ ++G+L Y +
Sbjct: 358 VLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGIL----YQDPEA 400
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
LK A E+ E + LI+ R +R +KD++ +D R LT GI L D + T WR
Sbjct: 401 FLKGNAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|220930944|ref|YP_002507852.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
gi|219992254|gb|ACL68857.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 484
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 237/428 (55%), Gaps = 29/428 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+I+ RA + G PL L+++Y + YL D+ ++ R +D +++I M+ ++++
Sbjct: 73 KIVARAREEGLRPLELADKYTKAYLEDIEKMKIKRADVYCRATDTIKEIIKMVKKLLDKG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY V G+V+F+VEK +YG+LSG+ LE +AG RV V+ KR+P DFALWK A AGE S
Sbjct: 133 YAYEVNGNVYFSVEKFSDYGKLSGRNLEEMQAGARVEVNEEKRHPMDFALWKKAPAGEIS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQS-CAACQDSNVS 180
WDSPWG G PGWHIECSAMS YL + DIHGGG DLIFPHHENEIAQS + V
Sbjct: 193 WDSPWGKGWPGWHIECSAMSIKYLGKRIDIHGGGTDLIFPHHENEIAQSESCTGEKPFVK 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG V EKMSKSLGNFFT+R+I + + P +R+FL++ HYRSP++++ ++++A
Sbjct: 253 YWLHNGSVNLKGEKMSKSLGNFFTVREILKEFKPDEVRYFLLTKHYRSPIDFNFEEVEAA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI----NKLRDEFHARMSDDLNTS 296
+ + T Q L N E+ I NK EF M DD NT+
Sbjct: 313 RKSWRKLVNTYQVMVQILEKGVITKNKITENTKGENTIISILNKKEKEFEEAMDDDFNTA 372
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
TG + + IN+ +N + + + + L+K +N ILGL
Sbjct: 373 RA-TGVMHELAREINTFVNSPEFELNGETS----KVLKKAQNLFDRFSDILGL------- 420
Query: 357 EVLQQLKDKALKRAELTEEDVLQ-----LIEERAAARKNKDFSKSDQIRADLTRKGIALM 411
D A ++ + ++L ++E R AR+ K++ +D+IR L G +
Sbjct: 421 -------DLAFSSSDEVDNEILNNLVDFILEIRDEARQEKNWQLADRIRDGLEDLGFEIK 473
Query: 412 DMGKETIW 419
D W
Sbjct: 474 DTPHGVRW 481
>gi|404399554|ref|ZP_10991138.1| cysteinyl-tRNA ligase [Pseudomonas fuscovaginae UPB0736]
Length = 460
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 228/423 (53%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ R D A L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGESFEALTERMIAAMHEDEARLNIQKPDMEPRATDHIAGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWKAAK GEP
Sbjct: 133 YAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDESKQDPLDFVLWKAAKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + ++YHP +R+ L+S+HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVSSHYRSAINYSEDNLKDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ L G A + + F M+DD T
Sbjct: 313 KGALERFYHALK----GLPNVPAAGGEAFV------------ERFTQAMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ IE+ + +K++ +LG VLQ
Sbjct: 357 VLFE-----MVREINRLREID--------IEAAAGLAARLKQLADVLG---------VLQ 394
Query: 361 QLKDKALKRAELTEEDVLQ---LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
D+ L+ D Q LI+ R AAR NKD+++SD+IR +T G+ L D T
Sbjct: 395 LEADEFLQAGAAGRVDAAQVEALIQARLAARANKDWAESDRIRDQITAMGVVLEDGKGGT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|218290036|ref|ZP_03494203.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
gi|218239870|gb|EED07058.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
Length = 474
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 230/423 (54%), Gaps = 31/423 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA +LG +P L+ + Y D L P T PRV++ ++ I I +I+
Sbjct: 74 RIIQRAQELGISPRELAEENIRYYFEDAGKLFIRPATVHPRVTECVDDIIRFIQDLIDRG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY G V+F P YG+LS Q E+ RAG R+ V K +P DFALWKAAK GE
Sbjct: 134 HAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGYRIEVQDEKDDPTDFALWKAAKPGEEW 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWGPGRPGWHIECS M+ YL + DIH GG DLIFPHHENEIAQS A + Y
Sbjct: 194 WPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGGRDLIFPHHENEIAQSEAHSGKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG + N EKMSKS GNF R + ER P A+R FL+SAHYR+PLNY+ LD A
Sbjct: 254 WLHNGTLNINGEKMSKSTGNFIMARDLLERRDPRAVRFFLLSAHYRNPLNYTEEALDQAE 313
Query: 242 DAVFYIYQTLQDCE---VALSPFQEHGKTARINPAAE--DCINKLRDEFHARMSDDLNTS 296
A+ I + ++D + AL + A P+ + + ++R F M DD NT+
Sbjct: 314 QALSRIDRLIRDLDHRAEALKAMRGALDRADEVPSTQGRSDVEQIRSAFIQAMDDDFNTA 373
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ F D ++ +N+ L ++ + L + E+L +LG+
Sbjct: 374 DGMAAIF-DGVRLVNTRL---------EEGGVTLGDLHLYRDLFVELLGVLGI------- 416
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
K E E+++ +LI ERA ARK +DF+++D+IR L +GI L D
Sbjct: 417 ---------PKKEEERLEDEIERLIAERAEARKRRDFARADEIRDQLRHRGIVLEDTPYG 467
Query: 417 TIW 419
T W
Sbjct: 468 TRW 470
>gi|146328731|ref|YP_001209134.1| cysteinyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
gi|166200146|sp|A5EWG6.1|SYC_DICNV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146232201|gb|ABQ13179.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
Length = 456
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 231/423 (54%), Gaps = 49/423 (11%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E +L+ R+ D A L CLPP+ +P+ ++++ ++ MI ++I +
Sbjct: 75 KIIRRAAENNEPIQALTQRFINAMHEDEAALGCLPPSIEPKATEYVAEMIAMIGELIAQN 134
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY+ + GDV+++V YG+L+ +RLE+ RAGER+A++ K +P DF LWK AK GEP
Sbjct: 135 HAYIADNGDVYYSVRSFDEYGKLANRRLEDLRAGERIAINEAKNDPLDFVLWKKAKTGEP 194
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECS MS H L FDIHGGG+DL FPHHE EIAQS C +V+
Sbjct: 195 SWESPWGAGRPGWHIECSVMSRHQLGDHFDIHGGGMDLKFPHHECEIAQSEPVCGGKHVN 254
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+HNG + +NEKMSKSLGNFFT+R + + Y +R F++ +HYR P+NYS L+ A
Sbjct: 255 YWLHNGFINIDNEKMSKSLGNFFTVRDVLKNYAGEVIRFFMLQSHYRGPVNYSDAALEEA 314
Query: 241 SDAVFYIYQTLQDCEVA----LSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
+ +Y L+ L P+QE F A M DD NT
Sbjct: 315 KRGLQRLYTALETAPTTGGAILLPYQE--------------------RFVAAMDDDFNTP 354
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ F+ A ML K + +LR + LGLL G
Sbjct: 355 QAIAVLFELA--------KMLNKAAAAEAADIAF-TLRTLAAR-------LGLL-TGDAK 397
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ QQ AL AE+ E I R AA+ KD++ +D IR L+ GI L D
Sbjct: 398 TLFQQ--KGALSAAEIEAE-----IARRQAAKAAKDYATADSIREKLSALGIELKDSATG 450
Query: 417 TIW 419
T W
Sbjct: 451 TQW 453
>gi|445496217|ref|ZP_21463261.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
gi|444792378|gb|ELX13925.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
Length = 463
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 177/429 (41%), Positives = 233/429 (54%), Gaps = 52/429 (12%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE L+ R+ Q D L LP T PR ++++ Q+ +I + + D
Sbjct: 75 KIIKRAVENGETISQLTTRFTQYMDEDTGALGILPATLVPRATEYVPQMLALIETLESKD 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV +AV PNYGRLSG+ L++ RAGERV V++ KR+P DF LWKA+K EP
Sbjct: 135 LAYQGSDGDVNYAVRNFPNYGRLSGKSLDDLRAGERVDVNTGKRDPLDFVLWKASKESEP 194
Query: 121 S---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
WDS WG GRPGWHIECSAM + L FDIHGGG DL FPHHENEIAQS A +
Sbjct: 195 DEVKWDSKWGKGRPGWHIECSAMCSALLGEHFDIHGGGADLQFPHHENEIAQSEGAFGRT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YW+HNG V +NEKMSKSLGNFFTIR + ++Y +R F++ AHYRSPLNYS L
Sbjct: 255 MVNYWVHNGFVRVDNEKMSKSLGNFFTIRDVLKKYDAEVVRFFILRAHYRSPLNYSDAHL 314
Query: 238 DSASDAVFYIYQTLQDCE---VALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLN 294
D A A+ +Y L E +AL + H F M DD N
Sbjct: 315 DDARVALTRLYTALDGVEGDGLALDWQEPHAA-----------------RFAEAMDDDFN 357
Query: 295 TSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA 354
T L F + S LN K K P + ++K + ++GLL
Sbjct: 358 TPVALAVLFD-----LVSELN--KSKSP------------AVARQLKALAGVIGLL---- 394
Query: 355 YSEVLQQLKDKALKRAELTEEDVLQLIEERAA--ARKNKDFSKSDQIRADLTRKGIALMD 412
+ Q+ + A+ + T+ D A+K ++F++SD+IRADL GI L D
Sbjct: 395 -ARTPQEFRQAAVGETD-TDGDAAIAARIAQRIEAKKARNFAESDKIRADLLTAGIILED 452
Query: 413 MGKETI-WR 420
T WR
Sbjct: 453 KPDGTTNWR 461
>gi|153839789|ref|ZP_01992456.1| cysteinyl-tRNA synthetase, partial [Vibrio parahaemolyticus AQ3810]
gi|149746697|gb|EDM57685.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 463
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 237/420 (56%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ SL+ R + D L P +PR + + +I +++ ++I
Sbjct: 76 KIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFISEIIELVEKLIERG 135
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF LWK +K GEP
Sbjct: 136 FAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDFVLWKMSKPGEP 195
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 196 TWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQSCCAHDTKYVN 255
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 256 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 315
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ ++ +P E+ +++ F A M+DD NT +
Sbjct: 316 RASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAMNDDFNTPEAYS 360
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK + +E ++ ++E+ ++G+L Y +
Sbjct: 361 VLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGIL----YQDPEA 403
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
LK A E+ E + LI+ R +R +KD++ +D R LT GI L D + T WR
Sbjct: 404 FLKGNAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTTWR 461
>gi|398303906|ref|ZP_10507492.1| cysteinyl-tRNA ligase [Bacillus vallismortis DV1-F-3]
Length = 466
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 229/424 (54%), Gaps = 39/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I+ AN+LG++ ++S R+ + Y D+ L C PRV ++M+ I + + Q++
Sbjct: 74 KLIKAANELGDDVPAISERFIKAYFEDVGALGCRKADLHPRVMENMDAIIEFVDQLVKKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F YG+LS Q ++ R+G R+ V +K + DFALWKAAK GE S
Sbjct: 134 YAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKDGEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM YL + DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WESPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
W+HNG++ +NEKMSKSLGNF + I +++ P LR F++S HYR P+NYS L++
Sbjct: 254 WLHNGYINIDNEKMSKSLGNFVLVHDIIKQHDPKLLRFFMLSVHYRHPINYSEELLENTK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED--CINKLRDE---FHARMSDDLNTS 296
A + A S + H + N +D + K+ D F M DD NT+
Sbjct: 314 SA-------FNRLKTAYSNLK-HRLNSSTNLTEDDDQWLEKVEDHRKAFEEAMDDDFNTA 365
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ ++ F D K N L K + +E +I + +LG
Sbjct: 366 NAISVLF-DLAKHANYYLQ--KDHTADHVITAFVEMFDRI-------VAVLGF------- 408
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+L EL ++++ LIE+R AR+N+DF+ SDQIR L I L D +
Sbjct: 409 ---------SLGEQELLDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQG 459
Query: 417 TIWR 420
T W+
Sbjct: 460 TRWK 463
>gi|238795438|ref|ZP_04638953.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
gi|238720557|gb|EEQ12358.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
Length = 461
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 226/422 (53%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L+ R E D L P +PR + H+ +I +M ++I D
Sbjct: 73 KIIKRAIENSETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEIIEMTERLIARD 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV FAV+ P+YG LS Q L+ +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWGPGRPGWHIECSAM++ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWQSPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ + +P AR F A M DD NT +
Sbjct: 313 RASLERLYTALRGTDANATPKGGAEFEAR---------------FRAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F I +N LK + I + + E++++ +LGLL P + +
Sbjct: 358 VLFD-----IAREVNRLKTED--------ITAANGLAAELRKLAHVLGLLEQDPELFLQS 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + + + E LI++R AR +KD++ +D R L GI L D + T
Sbjct: 405 GAQTDNDEVAKIE-------ALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTT 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|395794944|ref|ZP_10474258.1| cysteinyl-tRNA ligase [Pseudomonas sp. Ag1]
gi|395340887|gb|EJF72714.1| cysteinyl-tRNA ligase [Pseudomonas sp. Ag1]
Length = 462
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 170/420 (40%), Positives = 229/420 (54%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE+ +L+ R D A L L P +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ R G R+ VD K++P DF LWK K GEP
Sbjct: 133 YAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQDPLDFVLWKGTKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWG GRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA + +
Sbjct: 193 SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATGKTYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+S+HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVSSHYRSAINYSEDNLKDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ +++P AR F M+DD T
Sbjct: 313 KGALERFYHALKGLP-SVAPAGGEAFVAR---------------FTEVMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ S +++ + +KE+ +LG+L E
Sbjct: 357 VLFE-----MVREINRLRE--------SDLDAAAGLAARLKELASVLGVLQ----MEADD 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ A R + E D LI+ R AR NKD+++SD+IR LT G+ L D T WR
Sbjct: 400 FLQAGAEGRVDAAEVDA--LIQARLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|339006566|ref|ZP_08639141.1| cysteinyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
gi|421875251|ref|ZP_16306845.1| cysteinyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
gi|338775775|gb|EGP35303.1| cysteinyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
gi|372455719|emb|CCF16394.1| cysteinyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
Length = 468
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 164/419 (39%), Positives = 230/419 (54%), Gaps = 26/419 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++IR+AN+ L++RY Y D+ + LPP QPRV + + +I I +I
Sbjct: 74 KLIRKANEEQTTVAELADRYTVAYNQDLQGVNVLPPDIQPRVMNTIPEIISFIEGLIEKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY EGDV+F + YG+LS Q L++ +AG R+ V+ +K NP DFALWKAAK E S
Sbjct: 134 FAYESEGDVYFRTNRFNEYGKLSHQPLDDLQAGARIEVNEKKENPLDFALWKAAKPQEIS 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W+SPWG GRPGWHIECSAM+ +L DIH GG DL FPHHENEIAQS Y
Sbjct: 194 WESPWGAGRPGWHIECSAMALRFLGESIDIHAGGTDLTFPHHENEIAQSECFTGKPFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHN + +NEKMSKSLGNF R + +Y +R F++S HYRSP+N+S L+ A+
Sbjct: 254 WMHNAMLNIDNEKMSKSLGNFLLARDLIAKYTGQLIRFFMLSGHYRSPINFSDEMLEQAA 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTG 301
+ + I + L+ +E A+ I LR F M DDLNT++ +T
Sbjct: 314 NGLDRIKNAYVNLGHRLNTAREEEPNGLAQEQAQ-LIESLRKRFEEEMDDDLNTANGITV 372
Query: 302 AFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ 361
F I N+ + + I++ R++ ++E+ +LGL +LQ+
Sbjct: 373 LFD-----IAKEANLYTRHD--NVGATEIKAYRQL---LEELSSVLGL--------ILQE 414
Query: 362 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
A L +E++ LI ER ARK ++F++SD+IR L GI L D + WR
Sbjct: 415 -------EATLLDEEIELLIAERTEARKARNFARSDEIRDQLQEMGIILEDTPQGIRWR 466
>gi|314932753|ref|ZP_07840122.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
gi|313654434|gb|EFS18187.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
Length = 466
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 161/414 (38%), Positives = 232/414 (56%), Gaps = 33/414 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
++I R+ +L E+ ++ +Y + + D+ L T PRV +HM++I D I ++++
Sbjct: 73 KLINRSKELNESVPEIAEKYIKAFYEDVGALNVKKATSNPRVMNHMQEIIDFIKELVDEG 132
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV+F + YG+LS Q L++ + G R+ +K + DF LWK AK GE S
Sbjct: 133 YAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQKEDALDFTLWKKAKPGEIS 192
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
WDSP+G GRPGWHIECS M+ H L + DIH GG DL FPHHENEIAQS A +Y
Sbjct: 193 WDSPFGKGRPGWHIECSVMAYHELGATIDIHAGGSDLQFPHHENEIAQSEAHNHAPFANY 252
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG + +NEKMSKSLGNF + I + P LR F+IS HYRSP+NY++ + +A
Sbjct: 253 WMHNGFINIDNEKMSKSLGNFILVHDIIKEIDPDVLRFFMISVHYRSPINYNLELVGAAR 312
Query: 242 DAVFYI---YQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
+ I Y+ +++ E + +EH + D I + +F A M DD NT++
Sbjct: 313 SGLERIRNSYKLIEEREAIATDLEEHSEYI-------DQIETILRQFEAVMDDDFNTANA 365
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+T + L L K + S K+ + KEV +I +S+V
Sbjct: 366 VTAWY---------DLAKLANKYVLENTTST-----KVLHRFKEVYQI--------FSDV 403
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
L + K EL +ED+ +LIEER ARKNKDF+++D+IR L + I L D
Sbjct: 404 L-GVPLKGENENELLDEDIEKLIEERNEARKNKDFARADEIRDMLKERNIILED 456
>gi|325263764|ref|ZP_08130497.1| cysteine--tRNA ligase [Clostridium sp. D5]
gi|324030802|gb|EGB92084.1| cysteine--tRNA ligase [Clostridium sp. D5]
Length = 468
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 161/427 (37%), Positives = 229/427 (53%), Gaps = 36/427 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++A + G +S RY E DM + P T P ++ + + DMI +I
Sbjct: 72 KIIKKAIEEGVTADEVSKRYIAECKKDMEGMNVKPATKHPLATEEICGMVDMIGTLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY G V++ K YG+LS + L++ ++G R V + K + DF LWK K G
Sbjct: 132 YAYEKNGTVYYRTRKFKEYGKLSHKNLDDLQSGGRSLLVTGEDEKEDSLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+W+SPW GRPGWHIECS MS YL + DIH GG DL+FPHHENEIAQS AA
Sbjct: 192 EPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLVFPHHENEIAQSEAANGKEF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YWMHN + +N KMSKSLGNFFT+R+I+E+Y LR F++SAHYRSPLN+S +D
Sbjct: 252 ARYWMHNAFLNIDNRKMSKSLGNFFTVREISEKYDLQVLRFFMLSAHYRSPLNFSADLMD 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLR---DEFHARMSDDLNT 295
+A + I + L + + K + A ++ K + D F M DD NT
Sbjct: 312 AAKTGLDRIITAADN----LKFLKGNAKVQEMTSAEKEAFTKTQEYIDSFERAMDDDFNT 367
Query: 296 SHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY 355
+ ++ F+ +K+IN+S + + Q L L+ L +LG++
Sbjct: 368 ADAISSVFE-LVKYINTSADGESSAEYLQDLLDLLVKLTD----------VLGIIVE--- 413
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGK 415
K E+ ED+ LIEER AARK K+F+++D+IR +L +GI L D +
Sbjct: 414 ------------KDEEMLAEDIEALIEERQAARKAKNFARADEIRDELLSRGIVLEDTRE 461
Query: 416 ETIWRPC 422
W+
Sbjct: 462 GVKWKKA 468
>gi|161501802|ref|NP_761714.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|30316151|sp|Q8D8R1.2|SYC_VIBVU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319999475|gb|AAO11241.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
Length = 460
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 170/420 (40%), Positives = 237/420 (56%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE SL+ R E D L P +PR + ++++I +++ ++I
Sbjct: 73 KIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEIIELVERLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V K YG+LS Q L+ +AG RV V++ KR P DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRCPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEENLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ + + +P E+ +++ F A M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDFSAAP-----------AGGEEYVSR----FTAAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D + IN + K + L+ +L + E+ +V+ IL P A+
Sbjct: 358 VLF-DMAREIN---------RLKTEDLANASALGALMRELADVIGILH-QDPDAF----- 401
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
LK A E+ E + LI+ R +R KD++ +D R L GI L D + T WR
Sbjct: 402 -LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPEGTTWR 458
>gi|91793850|ref|YP_563501.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
gi|123356646|sp|Q12L98.1|SYC_SHEDO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91715852|gb|ABE55778.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
Length = 459
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 163/420 (38%), Positives = 234/420 (55%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ +L+ R E D L + P ++P+ + HM +I +M+ ++++
Sbjct: 73 KIIKRAAENNESCDALTERLTAEMHKDFDALNMVRPDFEPKATLHMPEIIEMVQRLLDRG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F+V YGRLSGQ ++ +AG RV +D K+NP DF LWK +K GEP
Sbjct: 133 HAYVAPDGDVLFSVASYKEYGRLSGQNIDQLQAGARVEIDHNKQNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWG GRPGWHIECSAM+ +L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGAGRPGWHIECSAMNGKHLGTHFDIHGGGSDLQFPHHENEIAQSCCAHDTPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH G V + EKMSKSLGNFFTIR + + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHTGMVMVDREKMSKSLGNFFTIRDVLKHYDAQTVRYFLLSGHYRSQLNYSEDNLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y +D ++ ++ A++ + K F + M+DD NT +
Sbjct: 313 RSALERLYTAFKDLDLTVTA-----------APADEYVTK----FKSAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + K + +L ++ +VL I+ S ++
Sbjct: 358 VLF-DMVREIN---------RLKTTDMGAASALGVSMKQLADVLGIV--------SVDIE 399
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ E+ E + LI ER AR KD++ +D R L + G+ L D T W+
Sbjct: 400 TFFKGSGSDDEVAE--IEALIVERNRARTEKDWAAADVARDRLNQLGVVLEDGENGTTWK 457
>gi|410671243|ref|YP_006923614.1| cysteinyl-tRNA synthetase [Methanolobus psychrophilus R15]
gi|409170371|gb|AFV24246.1| cysteinyl-tRNA synthetase [Methanolobus psychrophilus R15]
Length = 478
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 166/425 (39%), Positives = 239/425 (56%), Gaps = 28/425 (6%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RA + GE+P LS R+ + ++ DM L+ P QP V+ H+ +I D I +I +
Sbjct: 74 KIINRAKETGEDPFDLSARFTRSFIEDMTSLRVKKPDVQPTVTGHITEIVDAIKLLILRE 133
Query: 62 CAYVV-EGDVFFAVEKSP-NYGRLSGQRLEN--NRAGERVAVDSRKRNPADFALWKAAKA 117
AY EG+V++ + +S G LS Q E +G R+ V+ KR P DF LWK++
Sbjct: 134 FAYPTPEGNVYYDLRRSKEKIGILSHQTEEGLMEGSGARIDVEKDKRYPLDFVLWKSSSE 193
Query: 118 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
G+P WDSPW GRPGWHIECSAMS Y S + DIHGGG DLIFPHHE EI QS
Sbjct: 194 GQPGWDSPWSRGRPGWHIECSAMSMKYGSQQLDIHGGGADLIFPHHEAEIHQSEGCTGKH 253
Query: 178 NVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQ 236
S YWMHNG +T + EKMSKSLGNFFTI+Q+ E + P +R F+++ HYR+ +++S +
Sbjct: 254 PFSKYWMHNGFLTIDKEKMSKSLGNFFTIKQVLEEFPPEVIRFFILNTHYRNTIDFSKMH 313
Query: 237 LDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTS 296
L A A I T+ + A+ E + ++ D I++ RD+F M +D NT
Sbjct: 314 LQEAGRAYERIANTIVNVRYAIENAPEEDNDSGLS----DEISEARDQFTISMDEDFNTR 369
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
L F + K +N+ ++ +P +E++ +E+ EVL + G G
Sbjct: 370 EALANLFIFSRK-VNAIISGSSPGRPA------LEAILDFFSEIDEVLGVFGKDISGVTE 422
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ L DK D+ +I++R AR++KD+ +SD IR +L KGI + D GKE
Sbjct: 423 GTSRGLSDK----------DIDAMIQQREEARRSKDWQRSDAIRDELKEKGIVIED-GKE 471
Query: 417 TI-WR 420
+ WR
Sbjct: 472 GVRWR 476
>gi|393198919|ref|YP_006460761.1| cysteinyl-tRNA synthetase [Solibacillus silvestris StLB046]
gi|327438250|dbj|BAK14615.1| cysteinyl-tRNA synthetase [Solibacillus silvestris StLB046]
Length = 467
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 236/423 (55%), Gaps = 36/423 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+ AN+LGE L++R+ Y D+ L C PRV++HM+ I + I +I+
Sbjct: 74 KIIKAANELGEETSVLTDRFIAAYFEDITALGCQKADAHPRVTEHMDDIIEFIKVLIDKG 133
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
AY +GDV++ K YG+LS Q +++ + G R+ +K +P DFALWKAAKAGE
Sbjct: 134 YAYESQGDVYYRTRKFNGYGKLSHQSIDDLKVGARIEAGEKKEDPLDFALWKAAKAGEIK 193
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
W SPWG GRPGWHIECS M+ +L DIH GG DL FPHHENEIAQS A + Y
Sbjct: 194 WASPWGEGRPGWHIECSVMAREHLGDTIDIHAGGQDLTFPHHENEIAQSEAHNDKTFARY 253
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS 241
WMHNG++ +NEKMSKSLGNF + I ++ P LR F++S HYR+P+N++ +++A
Sbjct: 254 WMHNGYINIDNEKMSKSLGNFILVNDIRQQIDPQVLRFFMLSVHYRNPINFAQDLVEAAK 313
Query: 242 DAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE---DCINKLRDEFHARMSDDLNTSHI 298
+ + I + + L+ +A + +E + I +++ +F M+DD NT++
Sbjct: 314 NGLDRIRTSYTNVAHRLTS------SASLGDNSEQWLEKIGQIKVDFENAMNDDFNTANA 367
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE-NEVKEVLRILGLLPPGAYSE 357
++ F +LS I ++ E N KEVL+ + + +
Sbjct: 368 VSALF----------------------ELSHIANVYLNEANTDKEVLQAILTM----FDT 401
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
+ L A L +E++ LIEER ARKN+DF++SD+IR L I L D + T
Sbjct: 402 IGNVLGIHIKVEAGLLDEEIEALIEERNQARKNRDFARSDEIRDQLLGMDIVLEDTRQGT 461
Query: 418 IWR 420
W+
Sbjct: 462 RWK 464
>gi|238754302|ref|ZP_04615659.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
gi|238707549|gb|EEP99909.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
Length = 463
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 228/420 (54%), Gaps = 32/420 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L++R E D L P +P + H+ +I ++ ++I D
Sbjct: 73 KIIKRAAENNETCDQLTSRMLAEMHKDFDALNLERPDLEPHATHHISEIIQLVQRLIERD 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV FAV+ P+YG LS Q LE +AG RV + KRNP DF LWK +K GEP
Sbjct: 133 HAYVAANGDVMFAVDSDPDYGLLSRQDLEQLQAGARVEIADVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ + T + E+ F A M DD NT +
Sbjct: 313 RASLERLYTALRGMD-----------TNAVAAGGEE----FEARFRAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK + + + + E++++ +LGLL + LQ
Sbjct: 358 VLFDMA-----REVNRLKGED--------MAAANGLAAELRKLAHVLGLLAQDP-EQFLQ 403
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
+ E++E + LI++R AR +KD++ +D R L GI L D + TIWR
Sbjct: 404 SSAQTDVDNNEVSE--IEALIKQRNDARSSKDWALADSARDRLNEMGIVLEDSPQGTIWR 461
>gi|375265152|ref|YP_005022595.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
gi|369840473|gb|AEX21617.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
Length = 460
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 237/420 (56%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ SL+ R E D L P +PR + + +I +++ ++I
Sbjct: 73 KIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFITEIIELVEKLIERG 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF LWK +K GEP
Sbjct: 133 FAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 193 TWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTKYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 253 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ ++ +P E+ +++ F M+DD NT +
Sbjct: 313 RASLERLYTSLRGLDLKAAP-----------AGGEEYVSR----FTNAMNDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK + +E ++ ++E+ ++G+L Y +
Sbjct: 358 VLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGIL----YQDPEA 400
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
LK A E+ E + LI+ R +R +KD++ +D R LT GI L D + T WR
Sbjct: 401 FLKGDAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|33152217|ref|NP_873570.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|38372510|sp|Q7VMA0.1|SYC_HAEDU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|33148439|gb|AAP95959.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 459
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 234/422 (55%), Gaps = 40/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E+ +L R E D L + P +PR ++H+ +I M+ ++I N
Sbjct: 73 KIIKRALENNESCEALVERMIAEMHNDFDALNIMRPDVEPRATEHIAEIIAMVEKLIMNG 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV +GDV F V YG LS Q L+ +AG RV + S K+NP DF LWK +K EP
Sbjct: 133 HAYVAADGDVMFDVTSFNQYGALSRQNLDQLQAGARVEIKSAKKNPMDFVLWKRSKENEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQSC A Q V+
Sbjct: 193 SWLSPWGNGRPGWHIECSAMNNKELGEHFDIHGGGADLMFPHHENEIAQSCCAHQGEYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YW+H G +T + EKMSKS+GNFF+IR + Y +LR+F ++AHYRS L+YS LD A
Sbjct: 253 YWLHTGMLTIDKEKMSKSVGNFFSIRHMLGLYDAESLRYFFLTAHYRSLLDYSTDNLDLA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ +Y L+ C++++ Q +G + F M DD NT L
Sbjct: 313 RSALERLYTALRGCDLSV---QANGGENYVTA------------FKTAMDDDFNTPAALA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ A +N L K + +QQ +L L KE+ +LGLL
Sbjct: 358 VLFEMA-----REVNKL-KTEDQQQANALAVCL-------KELAAVLGLLT--------- 395
Query: 361 QLKDKALKRAELTEE--DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q D LK ++ ++ LI++R A+ NK+++ +DQ+R L I L D T+
Sbjct: 396 QDPDNFLKGEVNIDQTAEIEALIQQRNQAKANKNWAVADQVRGKLKAMNILLEDTPTGTV 455
Query: 419 WR 420
WR
Sbjct: 456 WR 457
>gi|271501481|ref|YP_003334507.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
gi|270345036|gb|ACZ77801.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
Length = 461
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 230/424 (54%), Gaps = 42/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE L+NR E D L L P +PR + ++ +I +++ ++I
Sbjct: 73 KIIRRATENGETIEQLTNRMIDEMHTDFRALNILSPDEEPRATHYIAEIIELVEKLIARR 132
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F+V+ +P YG LS Q LE +AG RV + KRNP DF LWK +KAGEP
Sbjct: 133 HAYVADNGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEITEVKRNPMDFVLWKMSKAGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW SPWG GRPGWHIECSAM+ L FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSTCAHGGDYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFT+R + Y +R+FLIS HYRS LNY+ L A
Sbjct: 253 YWMHSGMVMVDREKMSKSLNNFFTVRDVLSHYDAETIRYFLISGHYRSQLNYTEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCINKLRDEFHARMSDDLNTSHI 298
++ +Y L+ + ++ PAA E ++ RD M DD NT
Sbjct: 313 RASLERLYTALRGTDASV-------------PAAGGEAFEHRFRDA----MDDDFNTPEA 355
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYS 356
+ F A +N LK + ++++ +LGLL P +
Sbjct: 356 YSVLFDMA-----REVNRLKADDAAAASGL--------ASALRQLAGVLGLLEHDPELFL 402
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
+ Q D ++ E LI++R AR++KD++ +D R LT GI L D +
Sbjct: 403 QSGAQADDSEVQEIE-------ALIKQRNDARQSKDWALADAARNRLTEMGIVLEDGPQG 455
Query: 417 TIWR 420
T WR
Sbjct: 456 TTWR 459
>gi|332160825|ref|YP_004297402.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665055|gb|ADZ41699.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860142|emb|CBX70464.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica W22703]
Length = 461
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 227/422 (53%), Gaps = 38/422 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + E L+ R E D L P +PR + H+ +I ++ ++I +
Sbjct: 73 KIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEIIELTERLIARN 132
Query: 62 CAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV GDV F+VE P+YG LS Q L+ +AG RV V KRNP DF LWK +K GEP
Sbjct: 133 HAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V+
Sbjct: 193 SWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
YWMH+G V + EKMSKSL NFFTIR + Y +R+FL+S HYRS LNYS L A
Sbjct: 253 YWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLMSGHYRSQLNYSEENLKQA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y L+ +V +P AR F A M DD NT +
Sbjct: 313 RASLERLYTALRGTDVNAAPAGGAEFEAR---------------FRAAMDDDFNTPEAYS 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEV 358
F I +N LK + I + + E++++ +LGLL P + +
Sbjct: 358 VLFD-----IAREVNRLKAED--------ITAANALAAELRKLAHVLGLLEQDPELFLQS 404
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
Q + + E LI++R AR +KD++ +D R L GI L D + T+
Sbjct: 405 GAQADGDEVAKIE-------ALIKQRNDARTSKDWALADSARDQLNELGIVLEDGPQGTV 457
Query: 419 WR 420
WR
Sbjct: 458 WR 459
>gi|83719803|ref|YP_442471.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|167581386|ref|ZP_02374260.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
gi|167621097|ref|ZP_02389728.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis Bt4]
gi|257138679|ref|ZP_05586941.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|109894888|sp|Q2SX78.1|SYC_BURTA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83653628|gb|ABC37691.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
Length = 465
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 231/424 (54%), Gaps = 40/424 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + GE SL+ R+ D L P +PR +D + Q+ MI ++ N
Sbjct: 75 KIIRRALENGETIQSLTRRFIDAMNADFDALGVERPDIEPRATDFIPQMLGMIEKLEANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V K NYG+LSG+ LE+ RAGERVA K +P DF LWK AK EP
Sbjct: 135 YAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERVAAKDAKDDPLDFVLWKRAKPEEP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
SW+S +G GRPGWHIECSAM L FDIHGGG DL FPHHENEIAQS A +
Sbjct: 195 AGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENEIAQSEGATGQT 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V ++EKMSKSLGNFFTIR++ E+Y +R F++ HYRSPLNYS + L
Sbjct: 255 FVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLEKYDAEVVRFFIVRTHYRSPLNYSDVHL 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A ++ +Y L+D +P D F A M+DD NT+
Sbjct: 315 DDARASLTRLYTALKDVTPDAAPL--------------DWSEAHAQRFAAAMNDDFNTAV 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSE 357
+ F+ A + +N + +Q K+ L R+ E
Sbjct: 361 AVAVLFELATE-VNRTREPALARQLKRLAGLLGLLGREPR-------------------E 400
Query: 358 VLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKE 416
LQQ A + L +++ I R AA++ K+++++D+IRA+L GIAL D G
Sbjct: 401 FLQQAAGAA-RTGALEPDEIEARIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGS 459
Query: 417 TIWR 420
T WR
Sbjct: 460 TEWR 463
>gi|346307951|ref|ZP_08850079.1| cysteinyl-tRNA synthetase [Dorea formicigenerans 4_6_53AFAA]
gi|345904306|gb|EGX74054.1| cysteinyl-tRNA synthetase [Dorea formicigenerans 4_6_53AFAA]
Length = 468
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 234/424 (55%), Gaps = 34/424 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II +AN+ G +S RY +E DMA + P T P + +E + +I +++
Sbjct: 72 KIIAKANEEGVTAEEISQRYIEECKKDMAGMNVKPATTNPLATQEIEGMIQLIQTLMDKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY G V++ + YG+LS + L++ R+GER V+ K +P DF LWK K G
Sbjct: 132 YAYEKNGTVYYRTRQFKEYGKLSHKNLDDLRSGERSLLVSGADEKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP W SPW GRPGWH ECS MS YL + DIH GG DL+FPHHENEIAQS AA +
Sbjct: 192 EPFWKSPWSDGRPGWHTECSEMSKKYLGEQIDIHAGGEDLVFPHHENEIAQSEAANGKTF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
+YWMHN + +N KMSKSLGNF T+R+I+E+Y LR F++SAHYRSPLN+S ++
Sbjct: 252 ANYWMHNAFLNIDNRKMSKSLGNFRTVREISEQYDLQVLRFFMLSAHYRSPLNFSAELME 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINP--AAEDCINKLRDEFHARMSDDLNTS 296
+A ++ I + + + ++ TA A D K F M DD NT+
Sbjct: 312 AAKSSLERIVNAVDNLNFLIKNAKDEPMTAEEAELFAQTDSFVKA---FEDAMDDDFNTA 368
Query: 297 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 356
+ F+ +++ N++ + K K E L KI++ + ++ +LGL+
Sbjct: 369 DAVAAIFE-LVRYSNTNADAKKTK----------EYLGKIKDLIVKLADVLGLIVE---- 413
Query: 357 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 416
K+ E+ ED+ +LIEER AARK KDF+++D IR +L KGI L D +
Sbjct: 414 -----------KKEEILAEDIEKLIEERQAARKAKDFARADAIRDELLEKGIILKDTREG 462
Query: 417 TIWR 420
W+
Sbjct: 463 VQWK 466
>gi|26989624|ref|NP_745049.1| cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
gi|37999406|sp|Q88IU4.1|SYC_PSEPK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24984507|gb|AAN68513.1|AE016483_4 cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
Length = 460
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 227/423 (53%), Gaps = 42/423 (9%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II RAN+ GE +L+ R D L LPP +PR +DH+ + MI +I+
Sbjct: 73 KIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGMHAMIQTLIDKG 132
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +R+E+ R G R+ VD K++P DF LWK K GEP
Sbjct: 133 YAYAPGNGDVYYRVGKFVGYGKLSRKRIEDLRIGARIEVDEAKQDPLDFVLWKGVKPGEP 192
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SW+SPWGPGRPGWHIECS MS L FDIHGGG DL FPHHENEIAQS AA +
Sbjct: 193 SWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPHHENEIAQSEAATGKQYAN 252
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G + N EKMSKSL NFFTIR + E+YHP +R+ L+++HYRS +NYS L A
Sbjct: 253 AWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLVASHYRSAINYSEDSLRDA 312
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ L G A + + F M+DD T
Sbjct: 313 KGALERFYHALR----GLPRVAAKGGEAFV------------ERFSVAMNDDFGTPEACA 356
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F D ++ IN + + S +E+ + ++E+ +LG VLQ
Sbjct: 357 VLF-DLVREIN------------RLRDSDVEAAAGLAGRLRELGDVLG---------VLQ 394
Query: 361 QLKDKALK---RAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKET 417
D L+ ++ +V LI+ R AR +K++++SD+IR LT G+ L D T
Sbjct: 395 LEADDFLRAGAEGKVDAAEVEGLIQARLKARADKNWAESDRIRDQLTAMGVVLEDSKGTT 454
Query: 418 IWR 420
WR
Sbjct: 455 TWR 457
>gi|433657370|ref|YP_007274749.1| Cysteinyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
gi|432508058|gb|AGB09575.1| Cysteinyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
Length = 436
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 237/420 (56%), Gaps = 35/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II+RA + GE+ SL+ R + D L P +PR + + +I +++ ++I
Sbjct: 49 KIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFIAEIIELVEKLIERG 108
Query: 62 CAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AYV + GDV F V K YG+LS Q L+ +AG RV +++ KR+P DF LWK +K GEP
Sbjct: 109 FAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDFVLWKMSKPGEP 168
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
+W+SPWGPGRPGWHIECSAM++ L FDIHGGG DL FPHHENEIAQSC A V+
Sbjct: 169 TWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQSCCAHDTKYVN 228
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH+G V + EKMSKSLGNFFTIR + Y +R+FL+S HYRS LNYS L+ A
Sbjct: 229 TWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQA 288
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
++ +Y +L+ ++ +P E+ +++ F A M+DD NT +
Sbjct: 289 RASLERLYTSLRGLDLNAAP-----------AGGEEYVSR----FTAAMNDDFNTPEAYS 333
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F A +N LK + +E ++ ++E+ ++G+L Y +
Sbjct: 334 VLFDMA-----REVNRLKTES--------VEKASELGALMRELADVIGIL----YQDPEA 376
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
LK A E+ E + LI+ R +R +KD++ +D R LT GI L D + T WR
Sbjct: 377 FLKGNAGNDDEVAE--IEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTTWR 434
>gi|413958323|ref|ZP_11397562.1| cysteinyl-tRNA ligase [Burkholderia sp. SJ98]
gi|413940903|gb|EKS72863.1| cysteinyl-tRNA ligase [Burkholderia sp. SJ98]
Length = 465
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/426 (40%), Positives = 238/426 (55%), Gaps = 44/426 (10%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA + E+ SL+ R+ + DM L +PR ++ + Q+ MI + N
Sbjct: 75 KIIRRAVENNESIKSLTQRFIEAMYEDMDALGVARADIEPRATEFVPQMLGMIDALHANG 134
Query: 62 CAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY +GDV ++V K +YG+LSG+ +E+ RAGERV + K +P DF LWK +KAGEP
Sbjct: 135 YAYQAKDGDVNYSVRKFTDYGKLSGKSIEDLRAGERVTANDAKEDPLDFVLWKQSKAGEP 194
Query: 121 ---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 177
W+S WG GRPGWHIECSAM L +FDIHGGG+DL FPHHENEIAQS A
Sbjct: 195 EDTGWNSKWGRGRPGWHIECSAMGCTLLGEQFDIHGGGMDLQFPHHENEIAQSEGATGKQ 254
Query: 178 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 237
V+YWMHNG V ++EKMSKSLGNFFTIR++ E++ +R F+ AHYRSPLNYS + +
Sbjct: 255 FVNYWMHNGFVQIDSEKMSKSLGNFFTIREVLEKFDAEVVRFFIARAHYRSPLNYSDVHI 314
Query: 238 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 297
D A +A+ +Y L+D E P + + N F + M+DD NT
Sbjct: 315 DDAKNALTRLYTALKDVE----PDNQQLDWSEANA----------QRFQSAMNDDFNTPV 360
Query: 298 ILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAY 355
++ F + S +N + +Q +K + +LGLL P A+
Sbjct: 361 AVSVLFD-----LASEVNRTRDAALARQ--------------LKGLAGVLGLLQREPRAF 401
Query: 356 SEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-G 414
Q A L+ +++ I ER AA++ K+++++D+IRA L GIAL D G
Sbjct: 402 ----LQRASGAGSSEGLSPQEIEAKIAERIAAKRAKNYAEADRIRAALLEAGIALEDKPG 457
Query: 415 KETIWR 420
T WR
Sbjct: 458 GSTEWR 463
>gi|225568316|ref|ZP_03777341.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
15053]
gi|225162845|gb|EEG75464.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
15053]
Length = 468
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 231/424 (54%), Gaps = 30/424 (7%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+II++A + G + +S RY +E DM + P T P ++ + + +MI +I
Sbjct: 72 KIIKKAIEEGVSADEISKRYIKECKKDMEGMNVKPATKHPLATEEICGMVEMIGSLIEKG 131
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER---VAVDSRKRNPADFALWKAAKAG 118
AY G V+F +YG+LS + L++ R GER V + K +P DF LWK K G
Sbjct: 132 YAYEKNGTVYFRTRSFKDYGKLSHKNLDDLRTGERSLLVTGEDEKEDPLDFVLWKPKKEG 191
Query: 119 EPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSN 178
EP+WDSPW GRPGWHIECS MS YL + DIH GG DL+FPHHENEIAQS AA
Sbjct: 192 EPAWDSPWSDGRPGWHIECSVMSRKYLGEQIDIHAGGEDLVFPHHENEIAQSEAANGKEF 251
Query: 179 VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLD 238
YWMHN + +N KMSKSLGNF T+R+I+E+Y LR F++SAHYRSPLN+S ++
Sbjct: 252 AKYWMHNAFLNIDNHKMSKSLGNFRTVREISEQYDLQVLRFFMLSAHYRSPLNFSADLME 311
Query: 239 SASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHI 298
++ + + I + + + + TA+ A ++ F A M DD NT+
Sbjct: 312 ASRNGLERIVNAAGNLKFLMGSAKSEEMTAQEREAFAGSEEFVKG-FEAAMDDDFNTADA 370
Query: 299 LTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEV 358
+ F+ +K+IN++ + + Q LS + L +LGL+
Sbjct: 371 VAAVFE-LVKYINTTADAHSSRAYLQALLSRLVKLTD----------VLGLIVD------ 413
Query: 359 LQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI 418
K+ ++ EE++ +LI ER AARK K+F+++D+IR L KGI L D +
Sbjct: 414 ---------KKEDMLEEEIEKLIAERQAARKEKNFARADEIRGTLLEKGIILEDTREGVK 464
Query: 419 WRPC 422
W+
Sbjct: 465 WKKA 468
>gi|452747914|ref|ZP_21947703.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
gi|452008063|gb|EME00307.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
Length = 461
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 224/420 (53%), Gaps = 36/420 (8%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
+IIRRA++ GE +L R D L L P +PR +DH+ + MI +I+
Sbjct: 74 KIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDIEPRATDHIAGMHTMIQTLIDKG 133
Query: 62 CAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEP 120
AY GDV++ V K YG+LS +++E+ + G R+ VD K++P DF LWK AK GEP
Sbjct: 134 FAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKQDPLDFVLWKGAKPGEP 193
Query: 121 SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS 180
SWDSPWG GRPGWHIECS MS L FDIHGGG DL+FPHHENEIAQS AA +
Sbjct: 194 SWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATGKQYAN 253
Query: 181 YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSA 240
WMH G V + EKMSKSLGNFFTIR++ E+YHP +R+ L+S+HYRSP+NYS L A
Sbjct: 254 AWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSPINYSEDSLREA 313
Query: 241 SDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILT 300
A+ Y L+ A PA D + F A M DD N+
Sbjct: 314 KSALERFYNGLKGLPEA-------------QPAGGD---EFVARFAAAMDDDFNSPEACA 357
Query: 301 GAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 360
F+ + +N L++ E+ +VL +L L P
Sbjct: 358 VLFE-----MIREVNRLRESDLPAAAALAARL-----KELADVLGVLQLEPE-------T 400
Query: 361 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 420
L+ A + + TE V LI R AR K++++SD+IR LT G+ L D T WR
Sbjct: 401 FLQAGAAGKVDATE--VEALIAARLTARAEKNWAESDRIRDQLTAMGVVLEDGKGGTTWR 458
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,967,088,575
Number of Sequences: 23463169
Number of extensions: 287124829
Number of successful extensions: 922862
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5948
Number of HSP's successfully gapped in prelim test: 281
Number of HSP's that attempted gapping in prelim test: 899935
Number of HSP's gapped (non-prelim): 7310
length of query: 449
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 303
effective length of database: 8,933,572,693
effective search space: 2706872525979
effective search space used: 2706872525979
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)