RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 013130
(449 letters)
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS)
{Escherichia coli [TaxId: 562]}
Length = 315
Score = 191 bits (486), Expect = 5e-58
Identities = 125/244 (51%), Positives = 152/244 (62%), Gaps = 1/244 (0%)
Query: 1 MQIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHM-EQIKDMITQIIN 59
+II+RAN+ GE+ +++ +R E D L L P +PR + H+ E I+ I
Sbjct: 72 DKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAK 131
Query: 60 NDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGE 119
GDV F V P YG LS Q L+ +AG RV V KRNP DF LWK +K GE
Sbjct: 132 GHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGE 191
Query: 120 PSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNV 179
PSW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+FPHHENEIAQS A V
Sbjct: 192 PSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYV 251
Query: 180 SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDS 239
+YWMH+G V + EKMSKSLGNFFT+R + + Y +R+FL+S HYRS LNYS L
Sbjct: 252 NYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQ 311
Query: 240 ASDA 243
A A
Sbjct: 312 ARAA 315
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 317
Score = 126 bits (315), Expect = 2e-33
Identities = 25/236 (10%), Positives = 58/236 (24%), Gaps = 7/236 (2%)
Query: 2 QIIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINND 61
I D S + + +++ ++ L + + I
Sbjct: 86 MPISEVPDPWGCHESYAEHFMRKFEEEVEKLGIEVDLLYASELYKRGEYSEEIRLAFEKR 145
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPS 121
+ + + + K + R + + + +K + E
Sbjct: 146 DKIMEILNKYREIAKQ-PPLPENWWPAMVYCPEHRREAEIIEWDGGWKVKYKCPEGHEGW 204
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCA-ACQDSNVS 180
D G + W ++ + D G D + + +
Sbjct: 205 VDIRSGNVKLRWRVDWPM---RWSHFGVDFEPAGKDHLVAGSSYDTGKEIIKEVYGKEAP 261
Query: 181 YWMHNGHVTNNNE--KMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSV 234
+ V + KMS S GN + + E P +R + +
Sbjct: 262 LSLMYEFVGIKGQKGKMSGSKGNVILLSDLYEVLEPGLVRFIYARHRPNKEIKIDL 317
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase
(MetRS) {Pyrococcus abyssi [TaxId: 29292]}
Length = 361
Score = 106 bits (265), Expect = 4e-26
Identities = 23/155 (14%), Positives = 44/155 (28%), Gaps = 11/155 (7%)
Query: 90 NNRAGERVAVDSRKRNPADFALWKAAKAG-EPSWDSPWGPGRPGWHIECSAMSAHYLSSK 148
+ V + + L+ +A + R G E +
Sbjct: 195 TRDLNWGIPVPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWKKYWLNIDGQT 254
Query: 149 FDIHGGGIDLIFPHHENEIAQSCAACQDSN---------VSYWMHNGHVTNNNEKMSKSL 199
IH G D I H A A + + N ++T +K S S
Sbjct: 255 RVIHFIGKDNIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSR 314
Query: 200 GNFFTIRQITERYHPLALRHFLIS-AHYRSPLNYS 233
+ + + + LR++L + ++S
Sbjct: 315 NWAIWVHEFLDVFPADYLRYYLTTIMPETRDSDFS 349
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase
(MetRS) {Escherichia coli [TaxId: 562]}
Length = 350
Score = 98.1 bits (243), Expect = 3e-23
Identities = 40/282 (14%), Positives = 77/282 (27%), Gaps = 52/282 (18%)
Query: 3 IIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQ-IKDMITQIINND 61
I+ +A LG P + QE+ D A Y S+ Q + + +++ N
Sbjct: 55 IMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENG 114
Query: 62 CAYVVEGDVFFAVE-------------------KSPNY-GRLSGQRLENNRAGERVAVDS 101
+ E S ++ L A+
Sbjct: 115 FIKNRTISQLYDPEKGMFLPDRFVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQE 174
Query: 102 RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF------------ 149
+ N + + S D+P+ +
Sbjct: 175 QVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRG 234
Query: 150 ----------------DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNE 193
H G D+++ H A + + ++H G+VT N
Sbjct: 235 DSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVH-GYVTVNGA 293
Query: 194 KMSKSLGNFFTIRQITERYHPLALRHFLIS--AHYRSPLNYS 233
KMSKS G F + +LR++ + + ++ +
Sbjct: 294 KMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLN 335
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS)
{Thermus thermophilus [TaxId: 274]}
Length = 348
Score = 92.0 bits (227), Expect = 4e-21
Identities = 34/282 (12%), Positives = 66/282 (23%), Gaps = 51/282 (18%)
Query: 3 IIRRANDLGENPLSLSNRYCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMIT-QIINND 61
+ R A GE+P + +R + L + + +++ ++ ++
Sbjct: 56 VYRAAQAAGEDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAG 115
Query: 62 CAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKA---- 117
Y E + + V Y G V ++
Sbjct: 116 DIYYGEYEGLYCVSCERFYTEKELVEGLCPIHGRPVERRKEGNYFFRMEKYRPWLQEYIQ 175
Query: 118 ----------------------------GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 149
P PWG P + + L +
Sbjct: 176 ENPDLIRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTFVWFDALLNYV 235
Query: 150 DIHGGGIDLIFPHHENEIAQSCAACQDSNVS-----------------YWMHNGHVTNNN 192
+ + + + +
Sbjct: 236 SALDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKAAGIPMYRHLNVGGFLLGPDG 295
Query: 193 EKMSKSLGNFFTIRQITERYHPLALRHFLIS-AHYRSPLNYS 233
KMSK+LGN + E+Y ALR++L+ Y S
Sbjct: 296 RKMSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVS 337
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase
(IleRS) {Staphylococcus aureus [TaxId: 1280]}
Length = 450
Score = 80.4 bits (197), Expect = 6e-17
Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 7/159 (4%)
Query: 91 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF- 149
+ E + +R D G P+ + + L ++
Sbjct: 291 DLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLETRPE 350
Query: 150 -----DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHV-TNNNEKMSKSLGNFF 203
D++ G D + I S A S + + +G V +KMSKSLGN
Sbjct: 351 LSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVI 410
Query: 204 TIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASD 242
Q+ ++ R ++ S Y + + S L SD
Sbjct: 411 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSD 449
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS)
{Thermus thermophilus [TaxId: 274]}
Length = 425
Score = 75.0 bits (183), Expect = 3e-15
Identities = 39/246 (15%), Positives = 70/246 (28%), Gaps = 26/246 (10%)
Query: 21 YCQEYLVDMADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNY 80
E + +++ P Q + + + GD+ F E+
Sbjct: 177 PRCETTLSDLEVETCSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGDIAFVPERWKKV 236
Query: 81 GR----------LSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGR 130
+S Q ++ D + N + + SP
Sbjct: 237 NMDWLENVKDWNISRQLWWGHQIPAWYCEDCQAVNVPRPERYLEDPTSCEACGSPRLKRD 296
Query: 131 PGWHIECSAMSAHYLSS--------------KFDIHGGGIDLIFPHHENEIAQSCAACQD 176
+ + LS+ D+ G D++F +
Sbjct: 297 EDVFDTWFSSALWPLSTLGWPEETEDLKAFYPGDVLVTGYDILFLWVSRMEVSGYHFMGE 356
Query: 177 SNVSYWMHNGHVTN-NNEKMSKSLGNFFTIRQITERYHPLALRHFLIS-AHYRSPLNYSV 234
+ +G V + +KMSKS GN ++ ERY ALR LI A + +
Sbjct: 357 RPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDL 416
Query: 235 LQLDSA 240
L+ A
Sbjct: 417 RWLEMA 422
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase
(IleRS) {Thermus thermophilus [TaxId: 274]}
Length = 452
Score = 62.3 bits (150), Expect = 5e-11
Identities = 20/116 (17%), Positives = 32/116 (27%), Gaps = 2/116 (1%)
Query: 120 PSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNV 179
W H S D GID +
Sbjct: 327 DVWYDSGAMPFASLHYPFEHEEVFRESFPADFIAEGIDQTRGWFNSLHQLGVMLFGSIAF 386
Query: 180 SYWMHNGHVTN-NNEKMSKSLGNFFTIRQITERYHPLALRHFLIS-AHYRSPLNYS 233
+ +G + + +KMSKS GN I ++ ALR ++ A + +
Sbjct: 387 KNVICHGLILDEKGQKMSKSKGNVVDPWDIIRKFGADALRWYIYVSAPPEADRRFG 442
>d1li5a1 a.27.1.1 (A:316-402) Cysteinyl-tRNA synthetase (CysRS)
{Escherichia coli [TaxId: 562]}
Length = 87
Score = 39.5 bits (92), Expect = 5e-05
Identities = 13/79 (16%), Positives = 24/79 (30%), Gaps = 13/79 (16%)
Query: 273 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 332
A F M DD NT D + +N + +
Sbjct: 15 VAPAGGEAFEARFIEAMDDDFNTPEAY-SVLFDMAREVNRLKA------------EDMAA 61
Query: 333 LRKIENEVKEVLRILGLLP 351
+ + ++++ +LGLL
Sbjct: 62 ANAMASHLRKLSAVLGLLE 80
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS)
{Thermus thermophilus [TaxId: 274]}
Length = 305
Score = 42.1 bits (98), Expect = 8e-05
Identities = 20/200 (10%), Positives = 46/200 (23%), Gaps = 16/200 (8%)
Query: 37 PTYQPRVSDHMEQIKDMITQIINNDCAYV---VEGDVFFAVEKSPNYGRLSGQRLENNRA 93
P R S+ + + +++ AY ++ ++ Y +
Sbjct: 76 PHGPYRQSERLPLYQKYAEELLKRGWAYRAFETPEELEQIRKEKGGYDGRARNIPPEEAE 135
Query: 94 GE---------RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 144
R+ V L G+ A
Sbjct: 136 ERARRGEPHVIRLKVPRPGTTEVKDELRGVVVYDNQEIPDVVLLKSDGYPTYHLANVVDD 195
Query: 145 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 204
+ + + + A ++ + K+SK +
Sbjct: 196 HLMGVTDVIRAEEWLVSTPIHVLL--YRAFGWEAPRFYHMPLLRNPDKTKISKRKS-HTS 252
Query: 205 IRQITER-YHPLALRHFLIS 223
+ + P ALR++L
Sbjct: 253 LDWYKAEGFLPEALRNYLCL 272
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS)
{Thermus thermophilus [TaxId: 274]}
Length = 370
Score = 37.6 bits (86), Expect = 0.003
Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 5/105 (4%)
Query: 109 FALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIA 168
F WK + P PG + SA + K + +D+ H + +
Sbjct: 212 FQFWKMGILEGLRFRPYENPYYPG--LRTSAPEGEAYTPKAEETINVVDVRQSHPQALVR 269
Query: 169 QSCAAC---QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 210
+ A + ++ + V +MS G ++ ++ E
Sbjct: 270 AALALAGYPALAEKAHHLAYETVLLEGRQMSGRKGLAVSVDEVLE 314
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS)
{Thermus thermophilus [TaxId: 274]}
Length = 494
Score = 33.8 bits (76), Expect = 0.037
Identities = 11/103 (10%), Positives = 25/103 (24%)
Query: 122 WDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY 181
+ G G + + + + E+ ++ + +
Sbjct: 373 EEPFQGLFTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRP 432
Query: 182 WMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISA 224
MSKS GN + + R ++ A
Sbjct: 433 HEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFA 475
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 105
Score = 28.7 bits (64), Expect = 0.53
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 329 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLK--DKALKR 369
+IE L + + E+ RIL + G+ +L+ LK K KR
Sbjct: 16 IIELLLEGDYSPSELARILDMRGKGSKKVILEDLKVISKIAKR 58
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase
(CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]}
Length = 448
Score = 28.5 bits (62), Expect = 2.1
Identities = 7/109 (6%), Positives = 25/109 (22%), Gaps = 6/109 (5%)
Query: 328 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLK------DKALKRAELTEEDVLQLI 381
++ + E + GL+P A + + + + L+
Sbjct: 21 GRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQAERYDTGALANAIATAGNSAIPLV 80
Query: 382 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQE 430
+ + T + + + ++ +
Sbjct: 81 KALGKVIATGVPEAERYVHLGATSQDAMDTGLVLQLRDALDLIEADLGK 129
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase
(CMLE) {Acinetobacter calcoaceticus [TaxId: 471]}
Length = 444
Score = 27.4 bits (59), Expect = 3.6
Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 8/94 (8%)
Query: 328 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLK--------DKALKRAELTEEDVLQ 379
+L+ + + E + + +G++P A + + + K D L +
Sbjct: 20 ALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAIDKIDFDALATATGLAGNIAIP 79
Query: 380 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDM 413
+++ A K+ D + + T + I
Sbjct: 80 FVKQLTAIVKDADEDAARYVHWGATSQDILDTAC 113
>d2b97a1 b.138.1.1 (A:1-70) Hydrophobin II, HfbII {Trichoderma
reesei [TaxId: 51453]}
Length = 70
Score = 25.5 bits (56), Expect = 3.7
Identities = 5/29 (17%), Positives = 10/29 (34%)
Query: 22 CQEYLVDMADLQCLPPTYQPRVSDHMEQI 50
C ++D+ + C PT +
Sbjct: 14 CATNVLDLIGVDCKTPTIAVDTGAIFQAH 42
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 26.1 bits (57), Expect = 5.8
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 12/97 (12%)
Query: 326 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDK-ALKRAELTEE--------- 375
QLSL +KI+ E+ E + G+ P + VL LK +LK +E+ E
Sbjct: 10 QLSLQALFQKIQPEMLESMEKQGVTPAQLF--VLASLKKHGSLKVSEIAERMEVKPSAVT 67
Query: 376 DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 412
+ +E++ + + I LT +G +
Sbjct: 68 LMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFE 104
>d2di4a1 a.269.1.1 (A:406-607) Cell division protein FtsH,
C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Length = 202
Score = 26.3 bits (57), Expect = 7.5
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 318 KKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDV 377
P + E R I + ++ I+ Y E L+ + K L++ +T E+
Sbjct: 132 VDTSPDLLREIDEEVKRIITEQYEKAKAIVE-----EYKEPLKAVVKKLLEKETITCEEF 186
Query: 378 LQLIEERAAARKNK 391
+++ + K+K
Sbjct: 187 VEVFKLYGIELKDK 200
>d2c2aa1 a.30.2.1 (A:232-320) Sensor histidine kinase TM0853
{Thermotoga maritima [TaxId: 2336]}
Length = 89
Score = 25.0 bits (54), Expect = 7.7
Identities = 14/69 (20%), Positives = 32/69 (46%)
Query: 278 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 337
I++++ EF A +S +L T A+ + + L++ K+ + + L +
Sbjct: 16 IDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLL 75
Query: 338 NEVKEVLRI 346
NE+ + R+
Sbjct: 76 NELLDFSRL 84
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 301
Score = 26.0 bits (56), Expect = 9.4
Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 107 ADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDL 158
ADF L + + + W S Y +++ D+ G+ L
Sbjct: 182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY-TTESDVWAYGVVL 232
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.391
Gapped
Lambda K H
0.267 0.0624 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,665,245
Number of extensions: 78259
Number of successful extensions: 353
Number of sequences better than 10.0: 1
Number of HSP's gapped: 345
Number of HSP's successfully gapped: 33
Length of query: 449
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 361
Effective length of database: 1,199,356
Effective search space: 432967516
Effective search space used: 432967516
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (24.8 bits)