Your job contains 1 sequence.
>013131
MDPEVQGVLTAAQKYWPHIYISDSLVMADTAVKMAKAGCQFITVLGVDFMSENVRAILDQ
AGFQDVGVYRMSGERIGCSLADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHE
LVPTITCTSSNVVQTILQAFAQIPDLNIWYGPDSYMGANITELFQQIAMMSDEEIAEIHP
KHNKDSIKSLLPRLHYYQDGTCIVHHLFGHEVVEKINEMYCDAFLTAHLEVPGEMFSLAM
EAKKRGMGVVGSTKNILDFIKERVQEALDRDVDDHLQFVLGTESGMLTSIVAAVCNLLGS
AKSSGNSKINVEIVFPVSSDSMTKSSISSSSNLKSVTLGDVALPVIPGVASGEGCSTNGG
CASCPYMKMNSLSSLLKVCHQLPHGKNNLKAYEAERFKLQTLQGKSIADVGCEPILHMRH
FQAKKELPEKLVNQVIHPHSGNCKSMSLS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013131
(449 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2157747 - symbol:QS "quinolinate synthase" spe... 1778 2.9e-183 1
TIGR_CMR|APH_0026 - symbol:APH_0026 "quinolinate syntheta... 133 3.6e-09 2
TIGR_CMR|ECH_0036 - symbol:ECH_0036 "quinolinate syntheta... 112 7.1e-09 3
UNIPROTKB|P11458 - symbol:nadA species:83333 "Escherichia... 80 1.0e-06 3
TIGR_CMR|SPO_3243 - symbol:SPO_3243 "quinolinate syntheta... 91 6.0e-06 3
TIGR_CMR|NSE_0969 - symbol:NSE_0969 "quinolinate syntheta... 81 5.0e-05 3
TIGR_CMR|GSU_0021 - symbol:GSU_0021 "quinolinate syntheta... 99 8.0e-05 4
TIGR_CMR|CHY_2374 - symbol:CHY_2374 "quinolinate syntheta... 122 0.00010 2
UNIPROTKB|Q9KR14 - symbol:nadA "Quinolinate synthase A" s... 100 0.00029 2
TIGR_CMR|VC_1833 - symbol:VC_1833 "quinolinate synthetase... 100 0.00029 2
TIGR_CMR|BA_4660 - symbol:BA_4660 "quinolinate synthetase... 117 0.00050 1
TIGR_CMR|CBU_0588 - symbol:CBU_0588 "quinolinate syntheta... 98 0.00051 2
UNIPROTKB|P65497 - symbol:nadA "Quinolinate synthase A" s... 111 0.00072 2
>TAIR|locus:2157747 [details] [associations]
symbol:QS "quinolinate synthase" species:3702
"Arabidopsis thaliana" [GO:0008987 "quinolinate synthetase A
activity" evidence=IEA;IGI;IMP] [GO:0009435 "NAD biosynthetic
process" evidence=IEA;IGI;IMP] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0008047 "enzyme activator activity"
evidence=IDA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0051176 "positive regulation of sulfur metabolic
process" evidence=IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IDA] [GO:0009060 "aerobic respiration"
evidence=IMP] [GO:0051347 "positive regulation of transferase
activity" evidence=IMP] InterPro:IPR003473 Pfam:PF02445
Pfam:PF02657 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0042803 GO:GO:0009435 GO:GO:0051539 GO:GO:0016226
GO:GO:0009060 GO:GO:0008047 GO:GO:0051347 EMBL:AB024031
eggNOG:COG0379 KO:K03517 GO:GO:0008987 InterPro:IPR003808
EMBL:AY035115 EMBL:AY113860 EMBL:AY085553 IPI:IPI00542335
RefSeq:NP_199832.1 UniGene:At.7913 ProteinModelPortal:Q9FGS4
SMR:Q9FGS4 STRING:Q9FGS4 PaxDb:Q9FGS4 PRIDE:Q9FGS4
EnsemblPlants:AT5G50210.1 GeneID:835086 KEGG:ath:AT5G50210
TAIR:At5g50210 HOGENOM:HOG000265746 InParanoid:Q9FGS4 OMA:IADVGCE
PhylomeDB:Q9FGS4 ProtClustDB:PLN02673 ArrayExpress:Q9FGS4
Genevestigator:Q9FGS4 GO:GO:0051176 Uniprot:Q9FGS4
Length = 718
Score = 1778 (630.9 bits), Expect = 2.9e-183, P = 2.9e-183
Identities = 342/436 (78%), Positives = 382/436 (87%)
Query: 1 MDPEVQGVLTAAQKYWPHIYISDSLVMADTAVKMAKAGCQFITVLGVDFMSENVRAILDQ 60
MDPEVQGVLTAAQK+WPHI ISDSLVMAD+AV MAKAGCQFITVLGVDFMSENVRAILDQ
Sbjct: 283 MDPEVQGVLTAAQKHWPHISISDSLVMADSAVTMAKAGCQFITVLGVDFMSENVRAILDQ 342
Query: 61 AGFQDVGVYRMSGERIGCSLADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHE 120
AGF+ VGVYRMS E IGCSLADAA+ PAY+NYLEAAS +PPSLHV+YINTSLETKA+AHE
Sbjct: 343 AGFEKVGVYRMSDETIGCSLADAASAPAYLNYLEAASRSPPSLHVVYINTSLETKAFAHE 402
Query: 121 LVPTITCTSSNVVQTILQAFAQIPDLNIWYGPDSYMGANITELFQQIAMMSDEEIAEIHP 180
LVPTITCTSSNVVQTILQAFAQ+P+L +WYGPDSYMGANI +LFQQ+ +M++EEIA IHP
Sbjct: 403 LVPTITCTSSNVVQTILQAFAQMPELTVWYGPDSYMGANIVKLFQQMTLMTNEEIANIHP 462
Query: 181 KHNKDSIKSLLPRLHYYQDGTCIVHHLFGHEVVEKINEMYCDAFLTAHLEVPGEMFSLAM 240
KH+ DSIKSLLPRLHY+Q+GTCIVHHLFGHEVVE+I MYCDAFLTAHLEVPGEMFSLAM
Sbjct: 463 KHSLDSIKSLLPRLHYFQEGTCIVHHLFGHEVVERIKYMYCDAFLTAHLEVPGEMFSLAM 522
Query: 241 EAKKRGMGVVGSTKNILDFIKERVQEALDRDVDDHLQFVLGTESGMLTSIVAAVCNLLGS 300
EAKKR MGVVGST+NILDFIK++VQEA+DR+VDDHLQFVLGTESGM+TSIVA + +LLGS
Sbjct: 523 EAKKREMGVVGSTQNILDFIKQKVQEAVDRNVDDHLQFVLGTESGMVTSIVAVIRSLLGS 582
Query: 301 AKSSGNSKINVEIVFPVXXXXXXXXXXXXXXXXXXVTLGDVALPVIPGVASGEGCSTNGG 360
S NSK+ VE+VFPV + +GDVALPV+PGVA GEGCS +GG
Sbjct: 583 ---SANSKLKVEVVFPVSSDSMTKTSSDSSNS---IKVGDVALPVVPGVAGGEGCSIHGG 636
Query: 361 CASCPYMKMNSLSSLLKVCHQLPHGKNNLKAYEAERFKLQTLQGKSIADVGCEPILHMRH 420
CASCPYMKMNSLSSLLKVCH+LP +N + AERFK QT QGK IADVGCEPILHMRH
Sbjct: 637 CASCPYMKMNSLSSLLKVCHKLPDLENVYGGFIAERFKRQTPQGKLIADVGCEPILHMRH 696
Query: 421 FQAKKELPEKLVNQVI 436
FQA KELP+KLV+QV+
Sbjct: 697 FQANKELPDKLVHQVL 712
>TIGR_CMR|APH_0026 [details] [associations]
symbol:APH_0026 "quinolinate synthetase complex, A
subunit" species:212042 "Anaplasma phagocytophilum HZ" [GO:0008987
"quinolinate synthetase A activity" evidence=ISS] [GO:0019363
"pyridine nucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00568 InterPro:IPR003473 InterPro:IPR023066 Pfam:PF02445
UniPathway:UPA00253 GO:GO:0005737 GO:GO:0009435 GO:GO:0019805
GO:GO:0046872 GO:GO:0051539 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0016765 eggNOG:COG0379 KO:K03517 ProtClustDB:PRK09375
GO:GO:0008987 TIGRFAMs:TIGR00550 HOGENOM:HOG000222770
RefSeq:YP_504663.1 ProteinModelPortal:Q2GLT8 STRING:Q2GLT8
GeneID:3930881 KEGG:aph:APH_0026 PATRIC:20948588 OMA:CPLADFL
BioCyc:APHA212042:GHPM-66-MONOMER Uniprot:Q2GLT8
Length = 321
Score = 133 (51.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 53/188 (28%), Positives = 94/188 (50%)
Query: 20 YISDSLVMADTAVKMAKAGCQFITVLGVDFMSENVRAILDQAGFQDVGVYRMSGERIGCS 79
++ DSL D + K + I GV FM+E V IL+ + + V + ++ GCS
Sbjct: 39 FVGDSL---DLSQKASTTDADIIVFCGVFFMAE-VAKILNPS--KKVILPDLNA---GCS 89
Query: 80 LADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTILQA 139
LAD+ + + +A S + + V YIN+S E K Y+ I CTSSN V I
Sbjct: 90 LADSCRGEDFKKFRQAHSDH---VSVTYINSSAEVKCYSD-----IICTSSNAVSII--- 138
Query: 140 FAQIP-DLNIWYGPDSYMGAN-ITELFQQIAMMSDEEIAEIHPKHNKDSIKSLLPRLHYY 197
+IP + I + PD Y+G I++ + + + + I +H + +++++ +L+ R +
Sbjct: 139 -NRIPKEKKILFAPDRYLGEFLISKTGRDMLLWNGSCI--VHERFSEEALVNLMVR---H 192
Query: 198 QDGTCIVH 205
+D + H
Sbjct: 193 KDAHVVAH 200
Score = 105 (42.0 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 199 DGTCIVHHLFGHEVVEKINEMYCDAFLTAHLEVPGEMFSLAMEAKKRGMGVVGSTKNILD 258
+G+CIVH F E + + + DA + AH E PG + R VGSTKN+L
Sbjct: 171 NGSCIVHERFSEEALVNLMVRHKDAHVVAHPECPGNLL--------RHAHCVGSTKNLLQ 222
Query: 259 FIKER 263
++K+R
Sbjct: 223 YVKDR 227
Score = 71 (30.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 346 IPGVASGEGCSTNGGCASCPYMKMNSLSSLLK-VCHQLP 383
+ G GC C+ CPYM++N++ L K + +LP
Sbjct: 255 VVGAEHSSGCEY---CSQCPYMRLNTMEKLYKCIAEELP 290
>TIGR_CMR|ECH_0036 [details] [associations]
symbol:ECH_0036 "quinolinate synthetase complex, subunit
A" species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0008987
"quinolinate synthetase A activity" evidence=ISS] [GO:0019363
"pyridine nucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00568 InterPro:IPR003473 InterPro:IPR023066 Pfam:PF02445
UniPathway:UPA00253 GO:GO:0005737 GO:GO:0009435 GO:GO:0019805
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0051539
GO:GO:0016765 eggNOG:COG0379 KO:K03517 ProtClustDB:PRK09375
GO:GO:0008987 TIGRFAMs:TIGR00550 HOGENOM:HOG000222770 OMA:GCPADEF
EMBL:U90899 RefSeq:YP_506869.1 ProteinModelPortal:O05104
STRING:O05104 PRIDE:O05104 GeneID:3927395 KEGG:ech:ECH_0036
PATRIC:20575643 BioCyc:ECHA205920:GJNR-36-MONOMER Uniprot:O05104
Length = 314
Score = 112 (44.5 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 44/140 (31%), Positives = 69/140 (49%)
Query: 20 YISDSLVMADTAVKMAKAGCQFITVLGVDFMSENVRAILDQAGFQDVGVYRMSGERIGCS 79
+I DSL ++ K A I GV FM+E V I++ A + V + ++ GCS
Sbjct: 40 FIGDSLELSR---KAATTTADVIVFCGVYFMAE-VAKIINPA--KKVLLPDLNA---GCS 90
Query: 80 LADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTILQA 139
LAD+ ++ + E + + + YIN+ E KAY+ I CTSS+ + I
Sbjct: 91 LADSCDAESFKKFREL---HKDCVSITYINSLAEVKAYSD-----IICTSSSAEKII--- 139
Query: 140 FAQIPD-LNIWYGPDSYMGA 158
QIP+ I + PD ++GA
Sbjct: 140 -RQIPEEKQILFAPDKFLGA 158
Score = 69 (29.3 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 200 GTCIVHHLFGHEVVEKINEMYCDAFLTAHLEVPGEMFSLAMEAKKRGMGVVGSTKNILDF 259
GTCIVH F + + + A++ AH E PG + A +GST +L F
Sbjct: 173 GTCIVHESFSERELIDMMVRHDKAYVLAHPECPGHLLKYAH--------FIGSTTQLLKF 224
Score = 58 (25.5 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 356 STNGGCASC---PYMKMNSLSSL 375
S +GGC SC P+M++N+L L
Sbjct: 260 SDSGGCVSCSKCPHMRLNTLEKL 282
>UNIPROTKB|P11458 [details] [associations]
symbol:nadA species:83333 "Escherichia coli K-12"
[GO:0008987 "quinolinate synthetase A activity"
evidence=IEA;IDA;IMP] [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0019805 "quinolinate biosynthetic process"
evidence=IEA;IDA;IMP] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0034628 "de novo NAD biosynthetic process from aspartate"
evidence=IMP] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA;IDA;IMP] [GO:0005737 "cytoplasm" evidence=IEA]
HAMAP:MF_00567 InterPro:IPR003473 InterPro:IPR023513 Pfam:PF02445
UniPathway:UPA00253 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0051539 GO:GO:0016765 eggNOG:COG0379 KO:K03517
ProtClustDB:PRK09375 GO:GO:0008987 TIGRFAMs:TIGR00550 OMA:GCPADEF
EMBL:X12713 PIR:F64810 RefSeq:NP_415271.1 RefSeq:YP_489023.1
ProteinModelPortal:P11458 SMR:P11458 DIP:DIP-1027N IntAct:P11458
PRIDE:P11458 EnsemblBacteria:EBESCT00000003282
EnsemblBacteria:EBESCT00000017017 GeneID:12934034 GeneID:945351
KEGG:ecj:Y75_p0723 KEGG:eco:b0750 PATRIC:32116699 EchoBASE:EB0624
EcoGene:EG10630 HOGENOM:HOG000222769
BioCyc:EcoCyc:QUINOLINATE-SYNTHA-MONOMER
BioCyc:ECOL316407:JW0733-MONOMER
BioCyc:MetaCyc:QUINOLINATE-SYNTHA-MONOMER Genevestigator:P11458
GO:GO:0034628 Uniprot:P11458
Length = 347
Score = 80 (33.2 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 39/137 (28%), Positives = 60/137 (43%)
Query: 21 ISDSLVMADTAVKMAKAGCQFITVLGVDFMSENVRAILDQAGFQDVGVYRMSGERIGCSL 80
ISDSL MA AK + V GV FM E + + + + + + + E CSL
Sbjct: 65 ISDSLEMARFG---AKHPASTLLVAGVRFMGETAKILSPE---KTILMPTLQAE---CSL 115
Query: 81 ADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTILQAF 140
+ + +A +P V+Y NTS KA A +V TSS V+ ++
Sbjct: 116 DLGCPVEEFNAFCDA---HPDRTVVVYANTSAAVKARADWVV-----TSSIAVE-LIDHL 166
Query: 141 AQIPDLNIWYGPDSYMG 157
+ + IW PD ++G
Sbjct: 167 DSLGEKIIW-APDKHLG 182
Score = 72 (30.4 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 351 SGEGCSTNGGCASCPYMKMNSLSSLLKVCHQLPHGKNNLKAYEAERFKLQTL 402
+GEG +T CA CP+M MN L ++ + Q G N+ + + ER + + L
Sbjct: 285 AGEG-ATCRSCAHCPWMAMNGLQAIAEALEQ--EGSNH-EVHVDERLRERAL 332
Score = 72 (30.4 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 200 GTCIVHHLFGHEVVEKINEMYCDAFLTAHLEVPGEMFSLAMEAKKRGMGVVGSTKNILDF 259
G CIVH F + + ++ E Y DA + H E P + +A +A VGST ++
Sbjct: 198 GACIVHDEFKTQALTRLQEEYPDAAILVHPESPQAIVDMA-DA-------VGSTSQLIAA 249
Query: 260 IK----ERVQEALDRDV 272
K +R+ A DR +
Sbjct: 250 AKTLPHQRLIVATDRGI 266
>TIGR_CMR|SPO_3243 [details] [associations]
symbol:SPO_3243 "quinolinate synthetase complex, A
subunit" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008987
"quinolinate synthetase A activity" evidence=ISS] [GO:0019363
"pyridine nucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00568 InterPro:IPR003473 InterPro:IPR023066 Pfam:PF02445
UniPathway:UPA00253 GO:GO:0005737 GO:GO:0009435 GO:GO:0019805
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0051539
GO:GO:0016765 KO:K03517 ProtClustDB:PRK09375 GO:GO:0008987
TIGRFAMs:TIGR00550 HOGENOM:HOG000222770 OMA:GCPADEF
RefSeq:YP_168446.1 ProteinModelPortal:Q5LNG2 GeneID:3193531
KEGG:sil:SPO3243 PATRIC:23379931 Uniprot:Q5LNG2
Length = 350
Score = 91 (37.1 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 41/135 (30%), Positives = 58/135 (42%)
Query: 6 QGVLTAAQKYW-PHIYISDSLVMADT---AVKMAKAGCQFITVLGVDFMSENVRAILDQA 61
+G + Y P IY S + D+ A++ + I GV FM+E + IL
Sbjct: 60 RGAVILGHNYMTPEIYHGISDFVGDSLQLAIEATRTDADVIVQCGVHFMAETSK-ILSP- 117
Query: 62 GFQDVGVYRMSGERIGCSLADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHEL 121
D V M GCSLA++ T + + A P V Y+NT+ E KA +
Sbjct: 118 ---DKTVL-MPDMEAGCSLAESI-TAEGIAQMRAKYPGAPV--VSYVNTTAEVKAASD-- 168
Query: 122 VPTITCTSSNVVQTI 136
I CTSSN Q +
Sbjct: 169 ---ICCTSSNAAQIV 180
Score = 75 (31.5 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 26/106 (24%), Positives = 51/106 (48%)
Query: 165 QQIAMMSDEEIAEIHPKHNKDSIKSLLPRLHY-YQDGTCIVHHLFGHEVVEKINEMYCDA 223
Q +A + + I ++ ++ + +P+ + + +G+CIVH + + E
Sbjct: 178 QIVAALPEHTIIMTPDQYLAQNVAAQVPQKNVVWWEGSCIVHEQYSARDLRDFREWNPGT 237
Query: 224 FLTAHLEVPGEMFSLAMEAKKRGMGVVGSTKNILDFI-KERVQEAL 268
L AH E P ++ + EA GST I+D++ +E+ Q+AL
Sbjct: 238 RLIAHPECPPDVVA---EAD-----FSGSTSGIIDYVTREKPQKAL 275
Score = 49 (22.3 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 359 GGCASCPYMKMNSLSSLL 376
G C CPYMK +L +L
Sbjct: 297 GPCNMCPYMKKITLEKVL 314
>TIGR_CMR|NSE_0969 [details] [associations]
symbol:NSE_0969 "quinolinate synthetase complex, subunit
A" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0008987 "quinolinate synthetase A activity" evidence=ISS]
[GO:0019363 "pyridine nucleotide biosynthetic process"
evidence=ISS] InterPro:IPR003473 Pfam:PF02445 UniPathway:UPA00253
GO:GO:0005737 GO:GO:0009435 GO:GO:0019805 GO:GO:0046872
GO:GO:0016740 GO:GO:0051539 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0379 KO:K03517 ProtClustDB:PRK09375 GO:GO:0008987
TIGRFAMs:TIGR00550 HOGENOM:HOG000222770 OMA:GCPADEF
RefSeq:YP_506833.1 ProteinModelPortal:Q2GCG3 STRING:Q2GCG3
GeneID:3931926 KEGG:nse:NSE_0969 PATRIC:22681913
BioCyc:NSEN222891:GHFU-971-MONOMER Uniprot:Q2GCG3
Length = 315
Score = 81 (33.6 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 35/117 (29%), Positives = 52/117 (44%)
Query: 20 YISDSLVMADTAVKMAKAGCQFITVLGVDFMSENVRAILDQAGFQDVGVYRMSGERIGCS 79
++ DSL D + K + + I GV FM E V +L + V V M+ GCS
Sbjct: 38 FVGDSL---DLSKKASNTDAEIIVFCGVTFMGE-VAKLLSPG--KKVIVPDMAA---GCS 88
Query: 80 LADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTI 136
L D+ ++ NP L YIN+S+ KA + + CTSS+ + I
Sbjct: 89 LEDSCKVEHLKKFISPVE-NPFVL--TYINSSVHVKAISDSI-----CTSSSAEKII 137
Score = 79 (32.9 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 77 GCSLADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTI 136
GCSL D+ ++ NP L YIN+S+ KA + + CTSS+ + I
Sbjct: 86 GCSLEDSCKVEHLKKFISPVE-NPFVL--TYINSSVHVKAISDSI-----CTSSSA-EKI 136
Query: 137 LQAFAQIPDLNIWYGPDSYMGA 158
+ + + + NI + PD ++G+
Sbjct: 137 INSIPK--EKNIVFAPDKFLGS 156
Score = 73 (30.8 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 24/65 (36%), Positives = 30/65 (46%)
Query: 200 GTCIVHHLFG--HEVVEKINEMYCDAFLTAHLEVPGEMFSLAMEAKKRGMGVVGSTKNIL 257
GTCIVH F H + K+ DA + AH E P + A VGST IL
Sbjct: 171 GTCIVHESFSEKHAISLKLENP--DAKVVAHPECPDVLIKYA--------DFVGSTSQIL 220
Query: 258 DFIKE 262
+IK+
Sbjct: 221 SYIKK 225
Score = 51 (23.0 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 353 EGCSTNGGCA---SCPYMKMNSLSSL 375
E +++G CA CP+M++N++ L
Sbjct: 256 ESVNSSGTCAMCNKCPHMRLNTMEKL 281
>TIGR_CMR|GSU_0021 [details] [associations]
symbol:GSU_0021 "quinolinate synthetase complex, subunit
A" species:243231 "Geobacter sulfurreducens PCA" [GO:0008987
"quinolinate synthetase A activity" evidence=ISS] [GO:0019363
"pyridine nucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00568 InterPro:IPR003473 InterPro:IPR023066 Pfam:PF02445
UniPathway:UPA00253 GO:GO:0005737 GO:GO:0009435 GO:GO:0019805
GO:GO:0046872 GO:GO:0051539 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0016765 HSSP:O57767 eggNOG:COG0379 KO:K03517
ProtClustDB:PRK09375 GO:GO:0008987 TIGRFAMs:TIGR00550
HOGENOM:HOG000222770 RefSeq:NP_951083.1 ProteinModelPortal:Q74H71
GeneID:2688595 KEGG:gsu:GSU0021 PATRIC:22022779 OMA:DKCLGEN
BioCyc:GSUL243231:GH27-26-MONOMER Uniprot:Q74H71
Length = 304
Score = 99 (39.9 bits), Expect = 8.0e-05, Sum P(4) = 8.0e-05
Identities = 38/123 (30%), Positives = 56/123 (45%)
Query: 35 AKAGCQFITVLGVDFMSENVRAILDQAGFQDVGVYRMSGERIGCSLADAAATPAYMNYLE 94
A+ I GV FM+E+ +IL + V + RM GC +AD A LE
Sbjct: 49 ARTDADVIVFCGVHFMAESA-SILSPD--KTVLLPRMDA---GCPMADMVTAEAL---LE 99
Query: 95 AASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTILQAFAQIPDLNIWYGPDS 154
+ +P V Y+N+S KA V I CTS+N V+ + +PD + + PD
Sbjct: 100 MKARHPDVPVVTYVNSSAAVKA-----VSDICCTSANAVKVV----NSLPDPEVIFVPDR 150
Query: 155 YMG 157
+G
Sbjct: 151 NLG 153
Score = 53 (23.7 bits), Expect = 8.0e-05, Sum P(4) = 8.0e-05
Identities = 14/70 (20%), Positives = 29/70 (41%)
Query: 170 MSDEEIAEIHPKHNKDSIKSLLPRLHYYQDGTCIVHHLFGHEVVEKINEMYCDAFLTAHL 229
+ D E+ + ++ + + ++ DG C H V+++ E + DA H
Sbjct: 139 LPDPEVIFVPDRNLGQFVAKQSDKTFHFWDGFCPTHERLKPADVQRLKEAHPDALFICHP 198
Query: 230 EVPGEMFSLA 239
E + +LA
Sbjct: 199 ECNPLVVALA 208
Score = 40 (19.1 bits), Expect = 8.0e-05, Sum P(4) = 8.0e-05
Identities = 6/11 (54%), Positives = 11/11 (100%)
Query: 277 QFVLGTESGML 287
+F++GTE+G+L
Sbjct: 228 RFIIGTEAGIL 238
Score = 39 (18.8 bits), Expect = 8.0e-05, Sum P(4) = 8.0e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 364 CPYMKMNSLSSLL 376
CP MK+ SL +L
Sbjct: 259 CPNMKLTSLEDVL 271
>TIGR_CMR|CHY_2374 [details] [associations]
symbol:CHY_2374 "quinolinate synthetase complex, A
subunit" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008987 "quinolinate synthetase A activity" evidence=ISS]
[GO:0019363 "pyridine nucleotide biosynthetic process"
evidence=ISS] HAMAP:MF_00568 InterPro:IPR003473 InterPro:IPR023066
Pfam:PF02445 UniPathway:UPA00253 GO:GO:0005737 GO:GO:0009435
GO:GO:0019805 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0051539 GO:GO:0016765 eggNOG:COG0379 KO:K03517
ProtClustDB:PRK09375 GO:GO:0008987 TIGRFAMs:TIGR00550
HOGENOM:HOG000222770 OMA:GCPADEF RefSeq:YP_361171.1
ProteinModelPortal:Q3A9L3 STRING:Q3A9L3 GeneID:3727841
KEGG:chy:CHY_2374 PATRIC:21277815
BioCyc:CHYD246194:GJCN-2373-MONOMER Uniprot:Q3A9L3
Length = 306
Score = 122 (48.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 52/224 (23%), Positives = 97/224 (43%)
Query: 20 YISDSLVMADTAVKMAKAGCQFITVLGVDFMSENVRAILDQAGFQDVGVYRMSGERIGCS 79
Y+ DSL +A TA A + I GV FM+E+ + + + + GC
Sbjct: 40 YVGDSLGLARTA---ANTDAEVIVFAGVHFMAESAKILSPDK------IVLLPEIEAGCP 90
Query: 80 LADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTILQA 139
LAD + + + +P ++ V Y+N+S E KA + I CTS+N V+ ++++
Sbjct: 91 LADTITAESLR---KKKAEHPGAIVVTYVNSSAEVKAESD-----IICTSANAVK-VIES 141
Query: 140 FAQIPDLNIWYGPDSYMGANITELFQQIAMMSDEEIAEIHPKHNKDSIKSLLPRLHYYQD 199
P+ I + PD +G + + + ++ D H + D I+ + +
Sbjct: 142 IP--PEREIIFTPDRNLGDYVAKKTGRKLILWDG-YCNTHQRLTPDDIRQAKAE---HPN 195
Query: 200 GTCIVHHLFGHEVVEKINEMYCDAFLTAHL-EVPGEMFSLAMEA 242
+VH EVV + ++ + ++ PG+ F + EA
Sbjct: 196 AKVLVHPECRPEVVALADGVFSTTGIINYVVNDPGDEFIIGTEA 239
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 5/11 (45%), Positives = 11/11 (100%)
Query: 277 QFVLGTESGML 287
+F++GTE+G++
Sbjct: 232 EFIIGTEAGIM 242
>UNIPROTKB|Q9KR14 [details] [associations]
symbol:nadA "Quinolinate synthase A" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0006734 "NADH metabolic
process" evidence=ISS] [GO:0008987 "quinolinate synthetase A
activity" evidence=ISS] [GO:0019805 "quinolinate biosynthetic
process" evidence=ISS] HAMAP:MF_00567 InterPro:IPR003473
InterPro:IPR023513 Pfam:PF02445 UniPathway:UPA00253 GO:GO:0005737
GO:GO:0009435 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0051539 GO:GO:0016765 GO:GO:0006734 eggNOG:COG0379 KO:K03517
ProtClustDB:PRK09375 GO:GO:0008987 TIGRFAMs:TIGR00550 OMA:GCPADEF
PIR:E82151 RefSeq:NP_231467.1 ProteinModelPortal:Q9KR14
DNASU:2613587 GeneID:2613587 KEGG:vch:VC1833 PATRIC:20082708
Uniprot:Q9KR14
Length = 353
Score = 100 (40.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 31 AVKMAKAGCQF----ITVLGVDFMSENVRAILDQAGFQDVGVYRMSGERIGCSLADAAAT 86
+++MAK G ++ + + GV FM E+ + + + + + + + E CSL D
Sbjct: 68 SLEMAKFGNRYPATTLIIAGVRFMGESAKILTPE---KRILMPTLEAE---CSL-DLGC- 119
Query: 87 PAYMNYLEAASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTILQAFAQIPDL 146
PA + E +P V+Y NTS KA A +V TSS ++ + ++ +
Sbjct: 120 PAD-KFTEFCDAHPDHTVVVYANTSAAVKARADWVV-----TSSIALEIVEHLDSEGKPI 173
Query: 147 NIWYGPDSYMGANITELFQQIAMMSDEEIAEIHPKHNKDSIKSLLPRLHYYQDGTCIVHH 206
IW GPD ++GA I + ++ E +H + + D+++ + Y D +VH
Sbjct: 174 -IW-GPDRHLGAYIAKKTGADMLLWQGECV-VHDEFSADALRKMKA---LYPDAAILVHP 227
Query: 207 LFGHEVVE 214
VVE
Sbjct: 228 ESPASVVE 235
Score = 61 (26.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 345 VIPGVASGEGCSTNGGCASCPYMKMNSLSSLLKVCHQLPHGKNNLKAYEAERFKLQTL 402
+I +G G +T CA CP+M MN L ++ + + GK + + + E ++++L
Sbjct: 279 LIEAPTAGAG-ATCRSCAHCPWMAMNGLQAIAQALRE--GGKQH-EIFVDEALRVKSL 332
>TIGR_CMR|VC_1833 [details] [associations]
symbol:VC_1833 "quinolinate synthetase A" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0006734 "NADH metabolic
process" evidence=ISS] [GO:0008987 "quinolinate synthetase A
activity" evidence=ISS] HAMAP:MF_00567 InterPro:IPR003473
InterPro:IPR023513 Pfam:PF02445 UniPathway:UPA00253 GO:GO:0005737
GO:GO:0009435 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0051539 GO:GO:0016765 GO:GO:0006734 eggNOG:COG0379 KO:K03517
ProtClustDB:PRK09375 GO:GO:0008987 TIGRFAMs:TIGR00550 OMA:GCPADEF
PIR:E82151 RefSeq:NP_231467.1 ProteinModelPortal:Q9KR14
DNASU:2613587 GeneID:2613587 KEGG:vch:VC1833 PATRIC:20082708
Uniprot:Q9KR14
Length = 353
Score = 100 (40.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 31 AVKMAKAGCQF----ITVLGVDFMSENVRAILDQAGFQDVGVYRMSGERIGCSLADAAAT 86
+++MAK G ++ + + GV FM E+ + + + + + + + E CSL D
Sbjct: 68 SLEMAKFGNRYPATTLIIAGVRFMGESAKILTPE---KRILMPTLEAE---CSL-DLGC- 119
Query: 87 PAYMNYLEAASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTILQAFAQIPDL 146
PA + E +P V+Y NTS KA A +V TSS ++ + ++ +
Sbjct: 120 PAD-KFTEFCDAHPDHTVVVYANTSAAVKARADWVV-----TSSIALEIVEHLDSEGKPI 173
Query: 147 NIWYGPDSYMGANITELFQQIAMMSDEEIAEIHPKHNKDSIKSLLPRLHYYQDGTCIVHH 206
IW GPD ++GA I + ++ E +H + + D+++ + Y D +VH
Sbjct: 174 -IW-GPDRHLGAYIAKKTGADMLLWQGECV-VHDEFSADALRKMKA---LYPDAAILVHP 227
Query: 207 LFGHEVVE 214
VVE
Sbjct: 228 ESPASVVE 235
Score = 61 (26.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 345 VIPGVASGEGCSTNGGCASCPYMKMNSLSSLLKVCHQLPHGKNNLKAYEAERFKLQTL 402
+I +G G +T CA CP+M MN L ++ + + GK + + + E ++++L
Sbjct: 279 LIEAPTAGAG-ATCRSCAHCPWMAMNGLQAIAQALRE--GGKQH-EIFVDEALRVKSL 332
>TIGR_CMR|BA_4660 [details] [associations]
symbol:BA_4660 "quinolinate synthetase complex, subunit A"
species:198094 "Bacillus anthracis str. Ames" [GO:0008987
"quinolinate synthetase A activity" evidence=ISS] [GO:0019363
"pyridine nucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00569 InterPro:IPR003473 InterPro:IPR023515 Pfam:PF02445
UniPathway:UPA00253 GO:GO:0005737 GO:GO:0009435 GO:GO:0019805
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0051539 GO:GO:0016765
RefSeq:NP_846875.1 RefSeq:YP_021307.1 RefSeq:YP_030572.1
HSSP:O57767 ProteinModelPortal:Q81LG1 DNASU:1083657
EnsemblBacteria:EBBACT00000008839 EnsemblBacteria:EBBACT00000016967
EnsemblBacteria:EBBACT00000022048 GeneID:1083657 GeneID:2818299
GeneID:2851939 KEGG:ban:BA_4660 KEGG:bar:GBAA_4660 KEGG:bat:BAS4325
eggNOG:COG0379 HOGENOM:HOG000222768 KO:K03517 OMA:VGSTEYI
ProtClustDB:PRK09375 BioCyc:BANT260799:GJAJ-4380-MONOMER
BioCyc:BANT261594:GJ7F-4529-MONOMER GO:GO:0008987
TIGRFAMs:TIGR00550 Uniprot:Q81LG1
Length = 368
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00050
Identities = 63/244 (25%), Positives = 102/244 (41%)
Query: 23 DSLVMADTAVKMAKAGCQFITVLGVDFMSENVRAILDQAGFQDVGVYRMSGERIGCSLAD 82
DSL +A A +A ++I GV FM+E + D V + R GCS+AD
Sbjct: 62 DSLQLAQVAASNKEA--KYIVFCGVHFMAETADMLTT-----DEQVVILPDMRAGCSMAD 114
Query: 83 AAATPAYMNYLEAAST--NPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTILQAF 140
A E + + + Y+N++ KA+ T TSSN Q + AF
Sbjct: 115 MADIEQTERAWEELTKLFGDTMIPLTYVNSTAAIKAFCGRNGGA-TVTSSNAKQMVSWAF 173
Query: 141 AQIPDLNIWYGPDSYMGANIT-ELFQQIAMMS--DEEIAEIHPKHNKDSIKSLLPRLHYY 197
Q L + PD ++G N +L + M+ D + + + I+ +L + H
Sbjct: 174 TQKERLV--FLPDQHLGRNTAYDLGIPLDKMAVWDPHTDSLEYDGDIEEIQVILWKGH-- 229
Query: 198 QDGTCIVHHLFGHEVVEKINEMYCDAFLTAHLEVPGEMFSLAMEAKKRGMGVVGSTKNIL 257
C VH F + +E + + + D + H E E+ + + A GSTK I+
Sbjct: 230 ----CSVHQNFTVKNIENVRKNHPDMNIIVHPECCYEVVAASDYA--------GSTKYII 277
Query: 258 DFIK 261
D I+
Sbjct: 278 DMIE 281
>TIGR_CMR|CBU_0588 [details] [associations]
symbol:CBU_0588 "quinolinate synthetase complex, subunit
A" species:227377 "Coxiella burnetii RSA 493" [GO:0008987
"quinolinate synthetase A activity" evidence=ISS] [GO:0009435 "NAD
biosynthetic process" evidence=ISS] InterPro:IPR003473 Pfam:PF02445
UniPathway:UPA00253 GO:GO:0005737 GO:GO:0009435 GO:GO:0019805
GO:GO:0046872 GO:GO:0016740 GO:GO:0051539 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016829 KO:K03517
ProtClustDB:PRK09375 GO:GO:0008987 TIGRFAMs:TIGR00550 OMA:GCPADEF
HOGENOM:HOG000222769 RefSeq:NP_819618.1 ProteinModelPortal:Q83DV4
PRIDE:Q83DV4 GeneID:1208473 KEGG:cbu:CBU_0588 PATRIC:17929869
BioCyc:CBUR227377:GJ7S-591-MONOMER Uniprot:Q83DV4
Length = 331
Score = 98 (39.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 56/223 (25%), Positives = 92/223 (41%)
Query: 20 YISDSLVMADTAVKMAKAGCQFITVLGVDFMSENVRAILDQAGFQDVGVYRMSGERIGCS 79
++ DSL MA V+ + V GV FM E+ + IL D V + E CS
Sbjct: 47 FVGDSLAMAQFGVEQPATT---LMVAGVRFMGESAK-ILSP----DKRVLMPTVEAT-CS 97
Query: 80 LADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVVQTILQA 139
L ++ + + NP V+Y NTS KA A +V TSSN V+ I
Sbjct: 98 LDLGCPIESFSQFCDE---NPDRTVVVYCNTSAAVKARAEWVV-----TSSNAVEIIHHL 149
Query: 140 FAQIPDLNIWYGPDSYMGANITELFQQIAMMSDEEIAEIHPKHNKDSIKSLLPRLHYYQD 199
+ + +W PD Y+G+ + + M+ + +H + + + L + Y
Sbjct: 150 DDEGKKI-LW-APDRYLGSYLQKT-TGADMILWKGACIVHEEFKGEVLAELRKQ---YPH 203
Query: 200 GTCIVHHLFGHEVVEKINEMYCDA-FLTAHLEVPGEMFSLAME 241
+VH VVE+ + + L A E+P + +A +
Sbjct: 204 AAVLVHPESPPSVVEQATVVGSTSQLLKASQELPNDTLIVATD 246
Score = 60 (26.2 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 346 IPGVASGEGCSTNGGCASCPYMKMNSLSSL 375
I +G G +T C CP+M MN+L SL
Sbjct: 263 IEAPTAGHG-ATCRSCGHCPWMAMNNLQSL 291
>UNIPROTKB|P65497 [details] [associations]
symbol:nadA "Quinolinate synthase A" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008987 "quinolinate synthetase A activity" evidence=IDA]
[GO:0019805 "quinolinate biosynthetic process" evidence=IDA]
[GO:0034628 "de novo NAD biosynthetic process from aspartate"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IDA] HAMAP:MF_00568
InterPro:IPR003473 InterPro:IPR023066 Pfam:PF02445
UniPathway:UPA00253 GO:GO:0005737 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0046872 GO:GO:0051539 EMBL:BX842577 GO:GO:0016765
eggNOG:COG0379 KO:K03517 ProtClustDB:PRK09375 GO:GO:0008987
TIGRFAMs:TIGR00550 HOGENOM:HOG000222770 OMA:GCPADEF GO:GO:0034628
PIR:D70543 RefSeq:NP_216110.1 RefSeq:NP_336084.1
RefSeq:YP_006514983.1 ProteinModelPortal:P65497 SMR:P65497
PRIDE:P65497 EnsemblBacteria:EBMYCT00000000499
EnsemblBacteria:EBMYCT00000070592 GeneID:13316372 GeneID:886283
GeneID:924302 KEGG:mtc:MT1630 KEGG:mtu:Rv1594 KEGG:mtv:RVBD_1594
PATRIC:18125348 TubercuList:Rv1594 Uniprot:P65497
Length = 349
Score = 111 (44.1 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 40/135 (29%), Positives = 64/135 (47%)
Query: 74 ERIGCSLADAAATPAYMNYLEAASTNPPSLHVIYINTSLETKAYAHELVPTITCTSSNVV 133
+R GCSLAD+ TP + + +P ++ V Y+NT+ KA + I CTSSN V
Sbjct: 110 QRAGCSLADSI-TPDELRAWK--DEHPGAVVVSYVNTTAAVKA-----LTDICCTSSNAV 161
Query: 134 QTILQAFAQI-PDLNIWYGPDSYMGANITELF--QQIAMMSDEEIAEIHPKHNKDSIKSL 190
+ A I PD + + PD ++GA++ + + + + + E +H N D +
Sbjct: 162 DVV----ASIDPDREVLFCPDQFLGAHVRRVTGRKNLHVWAGE--CHVHAGINGDELADQ 215
Query: 191 LPRLHYYQDGTCIVH 205
R H D VH
Sbjct: 216 A-RAH--PDAELFVH 227
Score = 45 (20.9 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 362 ASCPYMKMNSLSSLLK 377
ASC YMKM + ++LL+
Sbjct: 298 ASCKYMKMITPAALLR 313
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 449 431 0.00086 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 611 (65 KB)
Total size of DFA: 259 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.62u 0.13s 33.75t Elapsed: 00:00:02
Total cpu time: 33.62u 0.13s 33.75t Elapsed: 00:00:02
Start: Mon May 20 22:32:42 2013 End: Mon May 20 22:32:44 2013