Query 013132
Match_columns 449
No_of_seqs 211 out of 1663
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 00:44:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013132.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013132hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 8.8E-40 1.9E-44 331.6 36.6 290 123-413 46-348 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 1E-38 2.2E-43 317.5 33.3 290 125-414 1-294 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 2.9E-41 6.4E-46 332.5 13.4 287 123-415 14-309 (316)
4 KOG1443 Predicted integral mem 99.9 2E-26 4.2E-31 220.2 20.7 287 126-414 16-316 (349)
5 PLN00411 nodulin MtN21 family 99.9 6E-25 1.3E-29 223.1 32.5 289 117-414 6-329 (358)
6 KOG1444 Nucleotide-sugar trans 99.9 1.7E-25 3.6E-30 216.6 25.9 284 129-416 15-303 (314)
7 PF08449 UAA: UAA transporter 99.9 7.7E-23 1.7E-27 203.8 31.2 273 136-414 10-298 (303)
8 PRK11689 aromatic amino acid e 99.9 2.9E-22 6.3E-27 198.9 31.6 266 125-414 7-288 (295)
9 PRK11272 putative DMT superfam 99.9 4.6E-21 1E-25 190.0 34.5 269 127-414 13-286 (292)
10 TIGR00950 2A78 Carboxylate/Ami 99.9 1.9E-21 4.2E-26 188.6 29.7 248 143-408 6-259 (260)
11 PRK10532 threonine and homoser 99.9 1.3E-20 2.7E-25 187.0 32.9 249 143-414 29-282 (293)
12 PRK11453 O-acetylserine/cystei 99.9 1.1E-20 2.4E-25 187.9 32.6 271 126-414 8-288 (299)
13 KOG1442 GDP-fucose transporter 99.9 2.7E-23 5.8E-28 195.7 6.7 285 125-415 27-329 (347)
14 PRK15430 putative chlorampheni 99.9 2.4E-19 5.1E-24 178.1 31.9 265 129-414 15-286 (296)
15 PF06027 DUF914: Eukaryotic pr 99.9 9.8E-20 2.1E-24 182.0 27.6 269 140-416 27-308 (334)
16 COG5070 VRG4 Nucleotide-sugar 99.8 2.8E-19 6E-24 164.2 17.4 256 132-397 12-279 (309)
17 TIGR03340 phn_DUF6 phosphonate 99.8 6.2E-18 1.3E-22 166.7 27.0 257 140-410 15-280 (281)
18 COG0697 RhaT Permeases of the 99.8 9.7E-16 2.1E-20 149.6 33.7 258 143-414 24-288 (292)
19 KOG1580 UDP-galactose transpor 99.7 2.3E-17 5.1E-22 152.7 14.2 268 136-411 23-311 (337)
20 KOG1582 UDP-galactose transpor 99.7 1.7E-16 3.7E-21 149.8 19.8 286 120-413 37-332 (367)
21 TIGR00688 rarD rarD protein. T 99.7 2.8E-15 6.2E-20 145.6 28.9 238 127-389 7-255 (256)
22 KOG1581 UDP-galactose transpor 99.7 1.3E-15 2.8E-20 146.4 24.9 282 125-414 13-313 (327)
23 PF03151 TPT: Triose-phosphate 99.7 9.1E-16 2E-20 137.0 16.4 144 270-413 1-153 (153)
24 TIGR00776 RhaT RhaT L-rhamnose 99.6 1.5E-13 3.3E-18 136.2 27.3 257 128-411 7-286 (290)
25 COG5006 rhtA Threonine/homoser 99.6 4E-13 8.6E-18 126.3 25.9 246 144-411 30-280 (292)
26 PF04142 Nuc_sug_transp: Nucle 99.6 2.4E-13 5.2E-18 131.3 21.7 208 187-402 15-242 (244)
27 KOG3912 Predicted integral mem 99.6 7.2E-13 1.6E-17 126.0 22.6 260 189-448 86-372 (372)
28 KOG4510 Permease of the drug/m 99.5 1.3E-14 2.8E-19 136.9 0.8 270 126-411 39-323 (346)
29 COG2962 RarD Predicted permeas 99.4 1.7E-10 3.7E-15 111.3 28.8 264 130-414 15-284 (293)
30 KOG2765 Predicted membrane pro 99.4 2.1E-12 4.5E-17 127.5 15.7 221 187-414 157-391 (416)
31 KOG2234 Predicted UDP-galactos 99.4 4E-10 8.7E-15 111.5 26.8 217 189-414 92-323 (345)
32 KOG1583 UDP-N-acetylglucosamin 99.3 6.9E-12 1.5E-16 119.2 11.6 261 143-413 20-314 (330)
33 PF00892 EamA: EamA-like trans 99.2 4.2E-10 9.1E-15 95.9 12.3 118 141-260 6-125 (126)
34 TIGR00803 nst UDP-galactose tr 99.0 6.8E-09 1.5E-13 98.8 12.2 188 213-411 2-222 (222)
35 PF06800 Sugar_transport: Suga 98.9 4.1E-07 9E-12 88.3 21.3 209 186-410 42-268 (269)
36 KOG4314 Predicted carbohydrate 98.9 2.3E-08 5E-13 91.1 11.3 217 188-414 52-277 (290)
37 COG2510 Predicted membrane pro 98.9 2.4E-08 5.2E-13 85.0 10.6 119 141-260 18-138 (140)
38 PF13536 EmrE: Multidrug resis 98.8 2.1E-08 4.6E-13 85.3 9.5 105 160-265 2-110 (113)
39 KOG2766 Predicted membrane pro 98.7 5.5E-09 1.2E-13 98.7 2.5 215 187-414 76-300 (336)
40 PF00892 EamA: EamA-like trans 98.7 1.3E-07 2.8E-12 80.3 9.8 122 279-411 1-124 (126)
41 TIGR00950 2A78 Carboxylate/Ami 98.5 4.1E-06 8.9E-11 81.0 17.1 115 141-256 143-259 (260)
42 COG2510 Predicted membrane pro 98.5 1.2E-06 2.7E-11 74.7 9.7 134 270-412 4-138 (140)
43 PRK15430 putative chlorampheni 98.4 1.1E-05 2.4E-10 80.2 17.5 139 265-411 4-143 (296)
44 TIGR00688 rarD rarD protein. T 98.4 1.3E-05 2.8E-10 77.8 17.0 138 269-411 2-140 (256)
45 PLN00411 nodulin MtN21 family 98.4 1.6E-05 3.4E-10 81.3 16.9 121 140-261 203-328 (358)
46 PRK10532 threonine and homoser 98.3 2.6E-05 5.6E-10 77.5 17.2 118 141-261 163-281 (293)
47 PRK11689 aromatic amino acid e 98.3 3E-05 6.4E-10 77.1 15.9 119 140-262 170-288 (295)
48 PRK11272 putative DMT superfam 98.2 3.9E-05 8.4E-10 76.1 16.5 120 142-263 166-287 (292)
49 TIGR03340 phn_DUF6 phosphonate 98.2 4.2E-05 9.1E-10 75.4 14.5 130 271-412 3-134 (281)
50 PRK15051 4-amino-4-deoxy-L-ara 98.2 6.5E-05 1.4E-09 63.8 13.7 63 198-260 46-108 (111)
51 PRK11453 O-acetylserine/cystei 98.1 0.00019 4.1E-09 71.4 17.1 123 140-262 157-288 (299)
52 TIGR00817 tpt Tpt phosphate/ph 97.9 0.00011 2.3E-09 73.2 12.4 123 138-261 157-293 (302)
53 PF03151 TPT: Triose-phosphate 97.9 0.00081 1.8E-08 59.6 15.5 125 136-260 10-152 (153)
54 PRK13499 rhamnose-proton sympo 97.7 0.01 2.2E-07 60.2 22.0 225 184-411 68-339 (345)
55 PRK02971 4-amino-4-deoxy-L-ara 97.7 0.001 2.3E-08 58.0 13.1 119 269-414 2-123 (129)
56 PF05653 Mg_trans_NIPA: Magnes 97.7 0.00034 7.5E-09 69.8 11.4 63 198-260 59-121 (300)
57 COG0697 RhaT Permeases of the 97.7 0.0022 4.7E-08 62.3 16.9 119 140-262 168-288 (292)
58 PTZ00343 triose or hexose phos 97.7 0.0016 3.4E-08 66.5 16.1 134 267-411 47-184 (350)
59 TIGR00776 RhaT RhaT L-rhamnose 97.5 0.0019 4.2E-08 64.1 13.4 113 141-260 167-287 (290)
60 COG2962 RarD Predicted permeas 97.4 0.0058 1.3E-07 59.7 15.2 135 268-411 6-142 (293)
61 PRK02971 4-amino-4-deoxy-L-ara 97.3 0.0015 3.3E-08 57.0 9.5 66 197-262 56-123 (129)
62 COG5006 rhtA Threonine/homoser 97.1 0.01 2.2E-07 56.9 13.3 116 141-258 163-279 (292)
63 COG4975 GlcU Putative glucose 97.1 0.00012 2.5E-09 69.5 -0.3 212 181-411 51-283 (288)
64 PRK10452 multidrug efflux syst 97.0 0.0054 1.2E-07 52.7 9.3 69 193-261 34-103 (120)
65 PF13536 EmrE: Multidrug resis 96.9 0.023 4.9E-07 48.1 12.5 55 359-414 52-107 (113)
66 PRK09541 emrE multidrug efflux 96.9 0.01 2.2E-07 50.3 10.1 66 196-261 37-103 (110)
67 PRK10650 multidrug efflux syst 96.8 0.022 4.9E-07 48.1 11.6 67 193-259 39-106 (109)
68 PRK11431 multidrug efflux syst 96.8 0.014 3.1E-07 48.9 10.3 66 194-259 34-100 (105)
69 KOG2922 Uncharacterized conser 96.5 0.0061 1.3E-07 60.2 6.6 63 199-261 74-136 (335)
70 COG2076 EmrE Membrane transpor 96.5 0.022 4.9E-07 47.6 9.0 66 195-260 36-102 (106)
71 PF08449 UAA: UAA transporter 96.2 0.13 2.8E-06 51.3 14.2 131 132-262 160-298 (303)
72 PF04657 DUF606: Protein of un 96.0 0.28 6.1E-06 43.2 14.1 115 143-258 18-138 (138)
73 PF00893 Multi_Drug_Res: Small 96.0 0.05 1.1E-06 44.6 8.5 55 198-252 38-93 (93)
74 PRK15051 4-amino-4-deoxy-L-ara 95.9 0.074 1.6E-06 45.1 9.4 52 361-412 56-108 (111)
75 PRK13499 rhamnose-proton sympo 95.6 0.38 8.1E-06 48.9 14.8 143 268-420 6-160 (345)
76 PF10639 UPF0546: Uncharacteri 95.6 0.036 7.7E-07 47.1 6.3 70 189-259 42-112 (113)
77 PRK09541 emrE multidrug efflux 95.5 0.15 3.3E-06 43.1 10.0 53 362-414 50-104 (110)
78 PRK10452 multidrug efflux syst 95.5 0.2 4.4E-06 43.1 10.8 53 362-414 50-104 (120)
79 PF04142 Nuc_sug_transp: Nucle 95.5 0.067 1.5E-06 51.8 8.9 70 345-414 20-90 (244)
80 PRK10650 multidrug efflux syst 95.5 0.43 9.3E-06 40.3 12.4 51 362-412 55-107 (109)
81 PF04657 DUF606: Protein of un 95.4 0.53 1.1E-05 41.5 13.3 129 271-410 3-138 (138)
82 PRK11431 multidrug efflux syst 95.3 0.21 4.5E-06 42.0 10.0 52 362-413 49-102 (105)
83 COG2076 EmrE Membrane transpor 95.3 0.27 5.9E-06 41.2 10.5 52 362-413 50-103 (106)
84 KOG4510 Permease of the drug/m 95.0 0.026 5.6E-07 54.5 4.0 75 185-259 249-323 (346)
85 PF06027 DUF914: Eukaryotic pr 94.8 0.6 1.3E-05 47.3 13.4 58 205-262 249-306 (334)
86 PF06800 Sugar_transport: Suga 94.6 1 2.2E-05 44.2 13.9 73 185-258 192-268 (269)
87 TIGR00803 nst UDP-galactose tr 94.6 0.35 7.6E-06 45.7 10.7 65 194-258 157-221 (222)
88 KOG2234 Predicted UDP-galactos 93.3 3.4 7.3E-05 41.8 15.1 67 346-412 96-163 (345)
89 COG3238 Uncharacterized protei 91.2 8.1 0.00018 34.5 13.3 117 143-260 22-145 (150)
90 COG3238 Uncharacterized protei 90.7 7.1 0.00015 34.9 12.5 137 268-414 4-147 (150)
91 KOG1441 Glucose-6-phosphate/ph 90.1 0.97 2.1E-05 45.4 7.3 130 130-261 167-307 (316)
92 PF07857 DUF1632: CEO family ( 88.8 1.1 2.4E-05 43.6 6.5 126 270-413 1-134 (254)
93 PF00893 Multi_Drug_Res: Small 88.0 4.4 9.5E-05 33.0 8.6 43 362-404 49-93 (93)
94 KOG1581 UDP-galactose transpor 85.4 11 0.00023 37.6 11.1 75 185-259 237-311 (327)
95 KOG2765 Predicted membrane pro 84.9 2.1 4.5E-05 43.6 6.1 80 347-426 164-244 (416)
96 PF06379 RhaT: L-rhamnose-prot 82.5 39 0.00085 34.3 13.9 144 268-423 6-163 (344)
97 PF05653 Mg_trans_NIPA: Magnes 80.4 12 0.00027 37.3 9.7 115 267-411 5-120 (300)
98 KOG1580 UDP-galactose transpor 78.5 3.2 7E-05 39.7 4.5 72 187-258 239-310 (337)
99 COG4975 GlcU Putative glucose 69.8 2.5 5.3E-05 40.8 1.5 126 270-415 3-138 (288)
100 COG5070 VRG4 Nucleotide-sugar 68.1 88 0.0019 30.0 11.2 121 138-259 167-294 (309)
101 KOG1442 GDP-fucose transporter 66.4 11 0.00023 37.2 5.0 134 126-260 184-326 (347)
102 KOG1444 Nucleotide-sugar trans 65.3 1.4E+02 0.003 30.1 12.6 130 270-412 13-148 (314)
103 PF04342 DUF486: Protein of un 64.7 73 0.0016 26.7 8.9 52 208-259 54-106 (108)
104 PF06379 RhaT: L-rhamnose-prot 62.7 1.8E+02 0.004 29.6 23.2 105 185-289 69-193 (344)
105 KOG4831 Unnamed protein [Funct 59.1 14 0.0003 31.0 3.8 69 191-260 55-124 (125)
106 COG3169 Uncharacterized protei 58.3 1.1E+02 0.0023 25.4 9.8 49 363-411 58-113 (116)
107 KOG4314 Predicted carbohydrate 56.9 13 0.00029 34.7 3.7 53 360-412 71-124 (290)
108 COG3169 Uncharacterized protei 54.6 1.2E+02 0.0027 25.1 10.7 32 228-259 82-113 (116)
109 PF10639 UPF0546: Uncharacteri 53.9 15 0.00033 31.2 3.3 38 373-410 73-111 (113)
110 KOG1582 UDP-galactose transpor 52.4 88 0.0019 30.9 8.6 53 214-266 285-337 (367)
111 PF04342 DUF486: Protein of un 45.6 1.6E+02 0.0034 24.8 7.9 48 364-411 52-106 (108)
112 PF05961 Chordopox_A13L: Chord 43.8 17 0.00037 27.7 1.8 18 397-414 6-23 (68)
113 PF05297 Herpes_LMP1: Herpesvi 40.5 9.2 0.0002 37.5 0.0 45 235-279 70-117 (381)
114 PRK10712 PTS system fructose-s 38.7 5.6E+02 0.012 28.1 15.3 59 221-291 278-336 (563)
115 PRK02237 hypothetical protein; 27.2 1.1E+02 0.0023 25.9 4.2 40 223-262 67-106 (109)
116 PF02694 UPF0060: Uncharacteri 25.4 1E+02 0.0022 26.0 3.7 40 223-262 65-104 (107)
117 PF08627 CRT-like: CRT-like; 23.8 1.5E+02 0.0033 25.7 4.6 38 124-161 55-93 (130)
118 PRK02935 hypothetical protein; 20.2 2.2E+02 0.0048 23.9 4.7 16 398-413 45-60 (110)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=8.8e-40 Score=331.61 Aligned_cols=290 Identities=33% Similarity=0.584 Sum_probs=252.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHHHH
Q 013132 123 PALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPIN--KELLVILTPVAFCHA 200 (449)
Q Consensus 123 ~~l~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~--~~~~~~~l~~gl~~~ 200 (449)
+.+++..+|+.||.+|+.+++.||++++.+|+|++++.+|++++++++.+.|..+.+++++.+ +++++.++++|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999999887777765554444443 458999999999998
Q ss_pred HHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHH
Q 013132 201 LGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIA 280 (449)
Q Consensus 201 ~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~ 280 (449)
..+...+.|++++++++++++|+++|+|+++++++++|||++++++++++++++|+++++.+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred HHHHHHHHHhhhcC-------CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHH---HHhhhchhHHHHHHHHHHH
Q 013132 281 FTYRSIYSKKAMTG-------MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKA---AIAKVGLFKFLSDLFWIGM 350 (449)
Q Consensus 281 ~a~~~V~~kk~~~~-------~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~---~~~~~~~~~~~~~l~~~gv 350 (449)
+++|+++.||.+++ +++.+.+.++++++.++++|+..+.|++.... .+.. ......+..++..++.+++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~s~l 284 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP-VWTNYTANMTNYTKGIIIFKIFFSGV 284 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHhhhcccccchHHHHHHHHHHHH
Confidence 99999999998864 45778888889999999999988777653221 1111 0111122233445677899
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhh
Q 013132 351 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNI 413 (449)
Q Consensus 351 ~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~ 413 (449)
+++++|.++|.++++++|+++++.+++||++++++|+++|||++++ +.+|+++++.|+++|++
T Consensus 285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~ 348 (350)
T PTZ00343 285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSL 348 (350)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998 68999999999999976
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1e-38 Score=317.53 Aligned_cols=290 Identities=53% Similarity=0.897 Sum_probs=247.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013132 125 LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHV 204 (449)
Q Consensus 125 l~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~ 204 (449)
+++++++++||.+|+.++++||++++++++|+.+++.|++++.+.+.+.+..+.+++++.++++|+.+++.|++++..+.
T Consensus 1 ~~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 80 (302)
T TIGR00817 1 LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHV 80 (302)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999988776666545555566788999999999999988999
Q ss_pred HHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 013132 205 MSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYR 284 (449)
Q Consensus 205 ~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~~a~~ 284 (449)
+.|+|++|+++++++++++++|+|+++++++++|||++++++++++++++|+++....|.+++..|++++++++++|+++
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~ 160 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR 160 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887777778889999999999999999
Q ss_pred HHHHHhhhc--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHH-HHHHHHHHHHH
Q 013132 285 SIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGM-FYHLYNQLATN 361 (449)
Q Consensus 285 ~V~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv-~~~~~~~~~~~ 361 (449)
.++.||.++ ++|++++..|++..+.+.++|++...|++.....++.+..........+...+..+. +++.+|...+.
T Consensus 161 ~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T TIGR00817 161 NIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM 240 (302)
T ss_pred HHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 789999999999999999999988777544322222111001111112222233333 55667777888
Q ss_pred HhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 362 TLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 362 ~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
.++++||.++++.++++|++++++|++++||++++ +.+|+++++.|+++|++.
T Consensus 241 ~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~ 294 (302)
T TIGR00817 241 LLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV 294 (302)
T ss_pred HHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 688999999999999875
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-41 Score=332.45 Aligned_cols=287 Identities=38% Similarity=0.530 Sum_probs=256.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHHHH
Q 013132 123 PALVTGFFFFMWYFLNVIFNILNKKVYN--YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPI-NKELLVILTPVAFCH 199 (449)
Q Consensus 123 ~~l~i~~~~~~w~~~s~~~~i~nK~~l~--~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~-~~~~~~~~l~~gl~~ 199 (449)
+.+..+.++..||+.|++++++||++++ +||+|++++.+|++++.+..++.+..+..++.++ ++..++.++++|+++
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 3778889999999999999999999999 8999999999999999999988888887776665 345899999999999
Q ss_pred HHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHH
Q 013132 200 ALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI 279 (449)
Q Consensus 200 ~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l 279 (449)
+++++++|.|+.|+++|++|++|+++|+|++++++++.+|+.+++.++++++++.|+++++.+|.+||+.|++.++++++
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL 173 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhc----CCChHHHHHHHHHHHHHHHH-HHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHH
Q 013132 280 AFTYRSIYSKKAMT----GMDSTNVYAYTSIIALLFCI-PPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHL 354 (449)
Q Consensus 280 ~~a~~~V~~kk~~~----~~~~~~l~~~~s~~s~l~Ll-p~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~ 354 (449)
+.+++++++|+.++ ++|++++++|+++++.+.++ |+....|+... . .+.. ..+.. .++..++. .+++|+
T Consensus 174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~--~~~~~-~~~~~~~~-sv~~f~ 247 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLT--APWFV-TFLILLLN-SVLAFL 247 (316)
T ss_pred HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeec--cccch-hhHHHHHH-HHHHHH
Confidence 99999999999884 47999999999999999999 88887777654 1 1110 01111 13333333 499999
Q ss_pred HHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhhh
Q 013132 355 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIRF 415 (449)
Q Consensus 355 ~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~~ 415 (449)
+|+..|++++++||+|++++|++|++++++.|+++|+|++++ +..|..+.++|+++|++..
T Consensus 248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k 309 (316)
T KOG1441|consen 248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK 309 (316)
T ss_pred HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998 5889999999999998873
No 4
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.95 E-value=2e-26 Score=220.18 Aligned_cols=287 Identities=18% Similarity=0.243 Sum_probs=241.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCC---CCCCCCCH-HHHHHHHHHHHHHH
Q 013132 126 VTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWT-VGL---PQRAPINK-ELLVILTPVAFCHA 200 (449)
Q Consensus 126 ~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~-~~~---~~~~~~~~-~~~~~~l~~gl~~~ 200 (449)
.+..++.+||+++++.+.++|+.-.+|++|++++.+|+++-.++...... .+. +++...++ ++.+.+.|.|+..+
T Consensus 16 ~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata 95 (349)
T KOG1443|consen 16 LTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATA 95 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhh
Confidence 33445599999999999999999999999999999999987776543332 121 12334444 46788889999999
Q ss_pred HHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHH
Q 013132 201 LGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIA 280 (449)
Q Consensus 201 ~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~ 280 (449)
.++.+.|+|++|++++++++.|++.++|+.+++.+|.-|++++.-.+..+++-+|+.+.++.+.+||..|+++.+++.++
T Consensus 96 ~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~ 175 (349)
T KOG1443|consen 96 LDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLL 175 (349)
T ss_pred cccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCC-----ChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchh---HHHHHHHHHHHHH
Q 013132 281 FTYRSIYSKKAMTGM-----DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLF---KFLSDLFWIGMFY 352 (449)
Q Consensus 281 ~a~~~V~~kk~~~~~-----~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~---~~~~~l~~~gv~~ 352 (449)
.+++..+.+..+++- +|++..++..+.-.+.++|..+.+||+.... +...+...+.. .....+...|...
T Consensus 176 sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~--~s~~f~~~d~~~~~rv~g~i~l~g~la 253 (349)
T KOG1443|consen 176 SGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLIT--SSSIFRFQDTGLILRVIGLISLGGLLA 253 (349)
T ss_pred hhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccch--hhhHHHhcCccHHHHHHHHHHHHHHHH
Confidence 999999999988753 5889999999999999999999999987532 11112222221 2223345667888
Q ss_pred HHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 353 HLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 353 ~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
++...+.|.++.+++.+|.|+++..|.+.+.++++++.+|.++. .+.|..+++.|+..|...
T Consensus 254 F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~ 316 (349)
T KOG1443|consen 254 FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNE 316 (349)
T ss_pred HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccC
Confidence 89999999999999999999999999999999999999999997 488999999999999443
No 5
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.95 E-value=6e-25 Score=223.06 Aligned_cols=289 Identities=10% Similarity=0.061 Sum_probs=212.5
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCC-CCCCCCCHHHHHHHHH
Q 013132 117 SFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWT-VGL-PQRAPINKELLVILTP 194 (449)
Q Consensus 117 ~~~~~~~~l~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~-~~~-~~~~~~~~~~~~~~l~ 194 (449)
+.|++..+.++++..+. ..+.+++++.|..++..-.|..+.++|++++++++++... +++ +++++.++++|..+..
T Consensus 6 ~~~~~~~~~~~~~~~~q--~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l 83 (358)
T PLN00411 6 SLWRREAVFLTAMLATE--TSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGL 83 (358)
T ss_pred hhhhhccchHHHHHHHH--HHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHH
Confidence 34444445555666555 5567778899999987544888999999999887765432 222 2223345677788888
Q ss_pred HHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHH------cCcccChhhHHHHHHHHhhhhhhccc-cc---
Q 013132 195 VAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFV------LGHQIPLSLWLSLAPVVIGVSMASLT-EL--- 264 (449)
Q Consensus 195 ~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~------l~e~~s~~~~lsllliv~Gv~L~~~~-e~--- 264 (449)
.|++.+....+.+.+++|++++.+.++.++.|++++++++++ ++||+++++++|+++.++|+.+.... +.
T Consensus 84 ~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~ 163 (358)
T PLN00411 84 LGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVF 163 (358)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccc
Confidence 888775556678999999999999999999999999999999 69999999999999999999876531 10
Q ss_pred --------------------ccc-HHHHHHHHHHHHHHHHHHHHHHhhhcCCChH-HHHHHHHHHHHHHHHHHHHHhhch
Q 013132 265 --------------------SFN-WTGFISAMISNIAFTYRSIYSKKAMTGMDST-NVYAYTSIIALLFCIPPAVLIEGP 322 (449)
Q Consensus 265 --------------------~f~-~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~-~l~~~~s~~s~l~Llp~al~~e~~ 322 (449)
..+ ..|..++++++++|+++++++|+..+++++. ...++++.++.+.+.+++...|..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~ 243 (358)
T PLN00411 164 VASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKN 243 (358)
T ss_pred cccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 112 4599999999999999999999988887664 556677777777777766665542
Q ss_pred hhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHH
Q 013132 323 QLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDL 401 (449)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg 401 (449)
.... |. ...+. .. ..++..+++..+.....++++++++|.+.++..++.|++++++|++++||++++ +.+|+
T Consensus 244 ~~~~--~~---~~~~~-~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~ 316 (358)
T PLN00411 244 NPSV--WI---IHFDI-TL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGG 316 (358)
T ss_pred Cccc--ce---eccch-HH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 2111 10 00111 11 112223332222223344589999999999999999999999999999999998 68899
Q ss_pred HHHHhhhhhhhhh
Q 013132 402 CADIHPEFCSNIR 414 (449)
Q Consensus 402 ~lil~Gv~ly~~~ 414 (449)
++++.|+++.++.
T Consensus 317 ~LIl~Gv~l~~~~ 329 (358)
T PLN00411 317 ILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998754
No 6
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.7e-25 Score=216.62 Aligned_cols=284 Identities=14% Similarity=0.172 Sum_probs=243.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHH--HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013132 129 FFFFMWYFLNVIFNILNKKVYNYFPYPYFVSV--IHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMS 206 (449)
Q Consensus 129 ~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~--~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~ 206 (449)
...+.|+..++.+.+.||++++.++||..+.. .|.+.+.+.+......|..+.++++++..|.++|+++++.+..+.+
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~ 94 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTG 94 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHc
Confidence 44566777799999999999999998877777 8999999998888888888888999999999999999999999999
Q ss_pred HHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHHHHHHHH
Q 013132 207 NVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSI 286 (449)
Q Consensus 207 ~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~~a~~~V 286 (449)
..+++|+++++++++|..+|+++++.+.+++|.+++...+.++..+.+|......+|.+++..|+.|+++.+++-+.+.+
T Consensus 95 ~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v 174 (314)
T KOG1444|consen 95 SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVV 174 (314)
T ss_pred cccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhc--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013132 287 YSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLE 364 (449)
Q Consensus 287 ~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~ 364 (449)
+.||..+ +.+.+.+++|.++.+...+.....+.|...-.. .....+....++..+.++|++.+..+++.+++.+
T Consensus 175 ~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~----~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~ 250 (314)
T KOG1444|consen 175 YVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALS----LNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTR 250 (314)
T ss_pred HHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHH----hhcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999765 567789999999999988888877664322111 1111122234566788999999999999999999
Q ss_pred ccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhhhhh
Q 013132 365 RVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNIRFS 416 (449)
Q Consensus 365 ~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~~~~ 416 (449)
..|++|.++.+......+.+...+++|++.++. .+|..+-.+|-..|+....
T Consensus 251 ~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~ 303 (314)
T KOG1444|consen 251 VNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATF 303 (314)
T ss_pred hccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhh
Confidence 999999999995555555666666666788885 7899999999999987643
No 7
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.92 E-value=7.7e-23 Score=203.83 Aligned_cols=273 Identities=18% Similarity=0.270 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHhh---CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 013132 136 FLNVIFNILNKKVYNY---FPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFAT 212 (449)
Q Consensus 136 ~~s~~~~i~nK~~l~~---fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~ 212 (449)
++...+.++.+++... .++|+++++.|+++..+...+...... ..+.++..++..++.++++.+...++|.|++|
T Consensus 10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 87 (303)
T PF08449_consen 10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKY 87 (303)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333444667777664 236999999999998887654443222 12224456788899999999999999999999
Q ss_pred cchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc----ccc------HHHHHHHHHHHHHHH
Q 013132 213 VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL----SFN------WTGFISAMISNIAFT 282 (449)
Q Consensus 213 vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~----~f~------~~G~l~~l~s~l~~a 282 (449)
++.++.+++|++.|+++++++.+++|+|++++++++++++++|+++....|. +.+ ..|+++++++.++.+
T Consensus 88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a 167 (303)
T PF08449_consen 88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDA 167 (303)
T ss_pred CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999876542 111 239999999999999
Q ss_pred HHHHHHHhhhc--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHH
Q 013132 283 YRSIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLAT 360 (449)
Q Consensus 283 ~~~V~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~ 360 (449)
+..++++|..+ +.++.+.++|.+.++.+.+++.....+..... ..+.. .. ..+..+..++..+++.+..+...+
T Consensus 168 ~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~-~~~~f-~~--~~p~~~~~l~~~s~~~~~g~~~i~ 243 (303)
T PF08449_consen 168 FTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFR-SAIRF-IS--AHPSVLLYLLLFSLTGALGQFFIF 243 (303)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhh-HHHHH-HH--HhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999886 46789999999999999988887763211111 11111 11 112344455556666665555566
Q ss_pred HHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 361 NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 361 ~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
.++++.||++.++..++++++++++|+++||+++++ +++|.+++..|..+|+..
T Consensus 244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~ 298 (303)
T PF08449_consen 244 YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA 298 (303)
T ss_pred HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence 789999999999999999999999999999999998 688999999999999776
No 8
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.92 E-value=2.9e-22 Score=198.88 Aligned_cols=266 Identities=12% Similarity=0.074 Sum_probs=188.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013132 125 LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHV 204 (449)
Q Consensus 125 l~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~ 204 (449)
+.....+++|.. ++ ...|..++++| |..+.++|+.++.+++++.. +.++ .++++++.++..++.+++.+.
T Consensus 7 l~~l~a~~~Wg~-~~---~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~---~~~~~~~~~~~~~l~~~~~~~ 76 (295)
T PRK11689 7 LIGLIAILLWST-MV---GLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPR---LRQFPKRYLLAGGLLFVSYEI 76 (295)
T ss_pred HHHHHHHHHHHH-HH---HHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cccc---cccccHHHHHHHhHHHHHHHH
Confidence 334455566654 33 57899999998 99999999999988776542 1222 122234444555555556666
Q ss_pred HHHHhhcc----cchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccccc-----------ccHH
Q 013132 205 MSNVSFAT----VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELS-----------FNWT 269 (449)
Q Consensus 205 ~~~~sL~~----vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~-----------f~~~ 269 (449)
+.+.+++| ++++.+.++.++.|+++++++++++|||+++++++++++.+.|+++...++.+ .+..
T Consensus 77 ~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 156 (295)
T PRK11689 77 CLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPL 156 (295)
T ss_pred HHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChH
Confidence 67777654 57778889999999999999999999999999999999999999888654321 2356
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132 270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (449)
Q Consensus 270 G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (449)
|++++++++++|+.++++.||..++.++..... ..+.+.+.+...+.+.+. ...++ ..+ ..+++.|
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~-~~~~~------~~~----~~l~~~~ 222 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPA-MVFSL------PAI----IKLLLAA 222 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCcc-ccCCH------HHH----HHHHHHH
Confidence 999999999999999999999887788776532 223334444333322211 11111 111 1112222
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 350 v~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
+....-....+..+++++|.+.++..+++|+++++++++++||++++ +.+|+++++.|+++...+
T Consensus 223 ~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 223 AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 22222223334589999999999999999999999999999999998 688999999998887554
No 9
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.91 E-value=4.6e-21 Score=189.99 Aligned_cols=269 Identities=14% Similarity=0.145 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHH
Q 013132 127 TGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH-ALGHVM 205 (449)
Q Consensus 127 i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~ 205 (449)
+....++|... .+..|..+++.+ |..++++|++++.+++++....+..+ ..++++++.....|++. .....+
T Consensus 13 ~~~~~~iWg~~----~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~ 85 (292)
T PRK11272 13 LFALYIIWGST----YLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGM 85 (292)
T ss_pred HHHHHHHHhhH----HHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555442 257898888887 99999999999988765544332222 22466788777888765 445677
Q ss_pred HHHhh-cccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc-cccccHHHHHHHHHHHHHHHH
Q 013132 206 SNVSF-ATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNIAFTY 283 (449)
Q Consensus 206 ~~~sL-~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~-e~~f~~~G~l~~l~s~l~~a~ 283 (449)
.+.+. ++++++.+.++.++.|+++.+++.+ +|||++++++++++++++|+.+...+ +.+.+..|.+++++++++|+.
T Consensus 86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~ 164 (292)
T PRK11272 86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAF 164 (292)
T ss_pred HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHH
Confidence 78888 9999999999999999999999985 69999999999999999999887643 334567899999999999999
Q ss_pred HHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhH-HHHHHHHHHHHHHHHHHHHHHH
Q 013132 284 RSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFK-FLSDLFWIGMFYHLYNQLATNT 362 (449)
Q Consensus 284 ~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gv~~~~~~~~~~~~ 362 (449)
+.++.||..++ ++.....+....+.+++.+.....+.+.....+. ..+.. .+..++.+++.+.++ +..
T Consensus 165 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~l~i~~s~~~~~l~----~~~ 233 (292)
T PRK11272 165 GSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTL------SGFLALGYLAVFGSIIAISAY----MYL 233 (292)
T ss_pred HHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCH------HHHHHHHHHHHHHHHHHHHHH----HHH
Confidence 99999997543 4455667777888888888766443321110010 11111 111222222223233 347
Q ss_pred hhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 363 LERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 363 l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
+++.++.+.++...++|+++++++++++||++++ +.+|+++++.|+++.+.+
T Consensus 234 ~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 234 LRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999998 688999999999988665
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.90 E-value=1.9e-21 Score=188.57 Aligned_cols=248 Identities=14% Similarity=0.131 Sum_probs=190.2
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH-HHHHHHHHHHHhhcccchHHHHHH
Q 013132 143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAF-CHALGHVMSNVSFATVAVSFTHTI 221 (449)
Q Consensus 143 i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl-~~~~~~~~~~~sL~~vsvs~a~ii 221 (449)
+..|..++..+.|..+++.|++++.+++.+....+ .++++++..+..|. .+.....+.+.|++|++++.+.++
T Consensus 6 ~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii 79 (260)
T TIGR00950 6 VVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL 79 (260)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence 56899888655589999999998888776554433 13445555555554 466777889999999999999999
Q ss_pred HhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc-cccccHHHHHHHHHHHHHHHHHHHHHHhhhcCCCh--H
Q 013132 222 KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDS--T 298 (449)
Q Consensus 222 ks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~-e~~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~--~ 298 (449)
.+++|+++++++.+++|||++++++.++++++.|+.+.... +.+.+..|++++++++++|+.+.++.||..++.++ .
T Consensus 80 ~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~ 159 (260)
T TIGR00950 80 LYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELL 159 (260)
T ss_pred HhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHH
Confidence 99999999999999999999999999999999999887543 33456789999999999999999999998877764 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHH-HHHHHHHHHhhccChhHHHHHhhh
Q 013132 299 NVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYH-LYNQLATNTLERVAPLTHAVGNVL 377 (449)
Q Consensus 299 ~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~-~~~~~~~~~l~~isp~t~Si~~~l 377 (449)
....+.+..+.++++|.....+..... +. . .+..++..|++.. ......+..+++.++.+.++...+
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~------~----~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~ 227 (260)
T TIGR00950 160 QFTGWVLLLGALLLLPFAWFLGPNPQA--LS------L----QWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALA 227 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCc--ch------H----HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 455567788888888887654332211 11 1 1111222333221 222233458999999999999999
Q ss_pred hHHHHHHHHHHhhCccchh-HHHHHHHHHhhh
Q 013132 378 KRVFVIGFSIVVFGNYFTA-SFHDLCADIHPE 408 (449)
Q Consensus 378 k~v~~il~sillfge~ls~-~~iGg~lil~Gv 408 (449)
+|+++++++++++||++++ +.+|.++++.|+
T Consensus 228 ~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 228 EPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999998 588888888875
No 11
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.90 E-value=1.3e-20 Score=187.02 Aligned_cols=249 Identities=16% Similarity=0.149 Sum_probs=186.5
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Q 013132 143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIK 222 (449)
Q Consensus 143 i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iik 222 (449)
.+.|++++++| |..+.++|++++.+++++....+. .+.++++++..+..|++......+.+.+++|++++.+.++.
T Consensus 29 ~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~ 104 (293)
T PRK10532 29 SLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALE 104 (293)
T ss_pred HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 36899999988 999999999999887765543221 12356777888888887777778888999999999999999
Q ss_pred hhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc--c-ccccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHH
Q 013132 223 ALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT--E-LSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTN 299 (449)
Q Consensus 223 s~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~--e-~~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~ 299 (449)
.+.|+++++++. |++.. ..++.+++.|+.+.... + .+.+..|.+++++++++|+.+.+..||..++.++..
T Consensus 105 ~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~ 178 (293)
T PRK10532 105 FTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEHGPAT 178 (293)
T ss_pred HHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Confidence 999999998873 55544 44566778998776522 2 234678999999999999999999999987777766
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchh-HHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhh
Q 013132 300 VYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLF-KFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLK 378 (449)
Q Consensus 300 l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~-~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk 378 (449)
.. +...++.+++.|+....+.... .++. .+. .++..++.+.+.+.+++ ..+++++|.+.|+..+++
T Consensus 179 ~~-~~~~~~~~~l~~~~~~~~~~~~--~~~~------~~~~~l~lgv~~t~~~~~l~~----~~~~~~~a~~as~~~~l~ 245 (293)
T PRK10532 179 VA-IGSLIAALIFVPIGALQAGEAL--WHWS------ILPLGLAVAILSTALPYSLEM----IALTRLPTRTFGTLMSME 245 (293)
T ss_pred HH-HHHHHHHHHHHHHHHHccCccc--CCHH------HHHHHHHHHHHHHHHHHHHHH----HHHHhcChhHHHHHHHhH
Confidence 54 5567777888887664332111 0110 010 11222222333333333 489999999999999999
Q ss_pred HHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 379 RVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 379 ~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
|++++++|++++||++++ +.+|+++++.|+..+..+
T Consensus 246 Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 246 PALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998 689999999999999765
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.90 E-value=1.1e-20 Score=187.93 Aligned_cols=271 Identities=11% Similarity=0.228 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHH-HHH
Q 013132 126 VTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHAL-GHV 204 (449)
Q Consensus 126 ~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~-~~~ 204 (449)
......++|.... ...|..+++++ |..+.++|++++.+.+++... .++ .+ ++..+..|++... ...
T Consensus 8 ~~l~~~~~Wg~~~----~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~--~~~---~~---~~~~~~~g~~~~~~~~~ 74 (299)
T PRK11453 8 LALLVVVVWGLNF----VVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA--RPK---VP---LNLLLGYGLTISFGQFA 74 (299)
T ss_pred HHHHHHHHHhhhH----HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc--CCC---Cc---hHHHHHHHHHHHHHHHH
Confidence 3445556665533 46798888888 999999999987765544332 111 11 2344455554333 334
Q ss_pred HHHHhhcc-cchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc---ccccHHHHHHHHHHHHH
Q 013132 205 MSNVSFAT-VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNIA 280 (449)
Q Consensus 205 ~~~~sL~~-vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e---~~f~~~G~l~~l~s~l~ 280 (449)
+.+.+++| ++++.+.++.++.|+++.+++++++|||++.+++++++++++|+.+....+ .+.++.|.+++++++++
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~ 154 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFS 154 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHH
Confidence 56678887 688999999999999999999999999999999999999999998876432 22356799999999999
Q ss_pred HHHHHHHHHhhhcCCCh---HHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHH-
Q 013132 281 FTYRSIYSKKAMTGMDS---TNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYN- 356 (449)
Q Consensus 281 ~a~~~V~~kk~~~~~~~---~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~- 356 (449)
|+.+.+++||..++.+. .....+....+.+.+...+...|++......+ ...++ ..+..+++.|++.....
T Consensus 155 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~l~~l~i~~t~~~~ 229 (299)
T PRK11453 155 WACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL----VTIDM-TTILSLMYLAFVATIVGY 229 (299)
T ss_pred HHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh----ccCCH-HHHHHHHHHHHHHHHHHH
Confidence 99999999997654433 34445555555554444444445432111111 11111 12223333343332222
Q ss_pred HHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 357 QLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 357 ~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
...+..+++.+|.+.+....++|+++++++++++||++++ +.+|+++++.|+++..+.
T Consensus 230 ~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 230 GIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 2223478999999999999999999999999999999998 689999999999887554
No 13
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=2.7e-23 Score=195.72 Aligned_cols=285 Identities=17% Similarity=0.257 Sum_probs=239.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhh----CCchHHHHHHHHHHHHHHHHHH-HHh----CCCC--CCCCCHHHHHHHH
Q 013132 125 LVTGFFFFMWYFLNVIFNILNKKVYNY----FPYPYFVSVIHLLVGVVYCLVS-WTV----GLPQ--RAPINKELLVILT 193 (449)
Q Consensus 125 l~i~~~~~~w~~~s~~~~i~nK~~l~~----fp~P~~lt~~r~l~~~l~lli~-~~~----~~~~--~~~~~~~~~~~~l 193 (449)
.++-.....+|..++++.+.||++++. ..-|.+.++.|.++...+++.. +.. ++.. ..+++.+..+.++
T Consensus 27 ~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vl 106 (347)
T KOG1442|consen 27 KQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVL 106 (347)
T ss_pred hchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhc
Confidence 344566677788899999999999984 5679999999999988776543 221 1111 2236677889999
Q ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc---ccccHHH
Q 013132 194 PVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE---LSFNWTG 270 (449)
Q Consensus 194 ~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e---~~f~~~G 270 (449)
|+++.+...+.+.|..++|++++++++-++++-+|+++++++++|++-+.....+-+++++|-.+-+..| ..+.+.|
T Consensus 107 plsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~G 186 (347)
T KOG1442|consen 107 PLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIG 186 (347)
T ss_pred chhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999988887 4568999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCC--hHHHHHHHHHHHHHHHHHHHHHh-hchhhhhhhHHHHHhhhchhHHHHHHHH
Q 013132 271 FISAMISNIAFTYRSIYSKKAMTGMD--STNVYAYTSIIALLFCIPPAVLI-EGPQLMQYGFKAAIAKVGLFKFLSDLFW 347 (449)
Q Consensus 271 ~l~~l~s~l~~a~~~V~~kk~~~~~~--~~~l~~~~s~~s~l~Llp~al~~-e~~~~~~~~~~~~~~~~~~~~~~~~l~~ 347 (449)
.++.+.+.++-|+..++.||.+...+ -+.+.+|+++.+.++.+|..++. |-..++. +. +.+...++..+.+
T Consensus 187 vifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~--~~----~l~a~~Fw~~mtL 260 (347)
T KOG1442|consen 187 VIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG--FP----HLPAIKFWILMTL 260 (347)
T ss_pred hHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC--cc----cchHHHHHHHHHH
Confidence 99999999999999999999877654 37999999999999999988765 3222221 11 1222257788899
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhhhh
Q 013132 348 IGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNIRF 415 (449)
Q Consensus 348 ~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~~~ 415 (449)
+|+++|.+|+.+.+-++-+||+|+.+-++.|.+.-.++++.+++|.-+.. +.+-.+++.|-..|.+..
T Consensus 261 sglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 261 SGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK 329 (347)
T ss_pred HHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999975 668889999999997653
No 14
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.87 E-value=2.4e-19 Score=178.14 Aligned_cols=265 Identities=13% Similarity=0.106 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCC-CC--CCC-CHHHHHHHHHHHHHHHHHHH
Q 013132 129 FFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLP-QR--API-NKELLVILTPVAFCHALGHV 204 (449)
Q Consensus 129 ~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~-~~--~~~-~~~~~~~~l~~gl~~~~~~~ 204 (449)
...++|.... ++.|.. .+.+ |..+.++|++++.+++++.+..+.+ +. .+. +++.+...+..++..+.++.
T Consensus 15 ~a~~~wg~~~----~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (296)
T PRK15430 15 AAYFIWGIAP----AYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWL 88 (296)
T ss_pred HHHHHHHHHH----HHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 3444554432 345765 5677 9999999999998766544332211 10 001 23344434444556667789
Q ss_pred HHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 013132 205 MSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYR 284 (449)
Q Consensus 205 ~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~~a~~ 284 (449)
+.++|+++++++.+.++..+.|+++++++++++|||+++++++++++++.|+++....+.+.. .++++++++|++|
T Consensus 89 ~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~ 164 (296)
T PRK15430 89 LFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAFY 164 (296)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998764433222 4577889999999
Q ss_pred HHHHHhhhcCC--ChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013132 285 SIYSKKAMTGM--DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNT 362 (449)
Q Consensus 285 ~V~~kk~~~~~--~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~ 362 (449)
.++.|+..++. +......|..+.+.+.+++.. +.+.. ... ..++ .....+...|+....-+.+.+..
T Consensus 165 ~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~------~~~~-~~~~~~~~~g~~t~i~~~~~~~a 233 (296)
T PRK15430 165 GLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTS-HMG------QNPM-SLNLLLIAAGIVTTVPLLCFTAA 233 (296)
T ss_pred HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcc-ccc------CCcH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999975322 223333444444444332221 11110 000 0011 01111222222222223334458
Q ss_pred hhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 363 LERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 363 l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
+++.+|.+.|...+++|+++++++++++||++++ +.+|+++++.|+.+....
T Consensus 234 ~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 234 ATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 588988887777666544
No 15
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.87 E-value=9.8e-20 Score=182.03 Aligned_cols=269 Identities=12% Similarity=0.117 Sum_probs=199.4
Q ss_pred HHHHHHHHHHhh-CCchHHHHHHHHHHHHHHHHHH--HHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 013132 140 IFNILNKKVYNY-FPYPYFVSVIHLLVGVVYCLVS--WTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVS 216 (449)
Q Consensus 140 ~~~i~nK~~l~~-fp~P~~lt~~r~l~~~l~lli~--~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs 216 (449)
+.+..+..+-+. ...|.+-+++-.+.-.++.... +..+.++..+.-++.|+..+.+|++-..++++.+.|++|++++
T Consensus 27 ~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvt 106 (334)
T PF06027_consen 27 GTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVT 106 (334)
T ss_pred hHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHh
Confidence 334455554443 4567766666554433322211 2222212222223455666778999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc---------cccHHHHHHHHHHHHHHHHHHHH
Q 013132 217 FTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL---------SFNWTGFISAMISNIAFTYRSIY 287 (449)
Q Consensus 217 ~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~---------~f~~~G~l~~l~s~l~~a~~~V~ 287 (449)
.++++.++.-+|+++++++++|+|+++.+++|+++.++|+++....|. +....|.++++++++.||+++++
T Consensus 107 S~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~ 186 (334)
T PF06027_consen 107 SVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVL 186 (334)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998865542 12478999999999999999999
Q ss_pred HHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 013132 288 SKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVA 367 (449)
Q Consensus 288 ~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~is 367 (449)
.++..++.+..+...+..+++.++..+....+|...+....|. + .....++..+++-+......-..++..|
T Consensus 187 ~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~-------~-~~~~~~v~~~~~lf~~y~l~p~~l~~ss 258 (334)
T PF06027_consen 187 EEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWT-------S-QVIGLLVGYALCLFLFYSLVPIVLRMSS 258 (334)
T ss_pred HHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC-------h-hhHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999888877777655332221 1 1111222222222222222233688999
Q ss_pred hhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhhhhh
Q 013132 368 PLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNIRFS 416 (449)
Q Consensus 368 p~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~~~~ 416 (449)
|+...+........++++++++||+++++. .+|.+++++|+++|+...+
T Consensus 259 At~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 259 ATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES 308 (334)
T ss_pred cceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence 998888887889999999999999999985 8899999999999987643
No 16
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.83 E-value=2.8e-19 Score=164.19 Aligned_cols=256 Identities=15% Similarity=0.172 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHHHHHHhh--CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 013132 132 FMWYFLNVIFNILNKKVYNY--FPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVS 209 (449)
Q Consensus 132 ~~w~~~s~~~~i~nK~~l~~--fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~s 209 (449)
..|.+.++.+++.||++++. |.....+.+.|-+++.+.+.+....+..+- +..+.|.++|.+++.+..++.+..+
T Consensus 12 lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f---R~t~aK~WfpiSfLLv~MIyt~SKs 88 (309)
T COG5070 12 LSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF---RLTKAKKWFPISFLLVVMIYTSSKS 88 (309)
T ss_pred HHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe---ehhhhhhhcCHHHHHHHHHHhcccc
Confidence 34556699999999999985 666678888999998887777666554432 2446777889999988888889999
Q ss_pred hcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc--------cccHHHHHHHHHHHHHH
Q 013132 210 FATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNIAF 281 (449)
Q Consensus 210 L~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~--------~f~~~G~l~~l~s~l~~ 281 (449)
++|.+++.+++.|.++.+.++..+.+++|.|++-....+.++++..-+.+.++|. .+| .|++|+...++..
T Consensus 89 LqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Nclss 167 (309)
T COG5070 89 LQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSS 167 (309)
T ss_pred eeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhH
Confidence 9999999999999999999999999999999999999999999999999888876 344 6999999999999
Q ss_pred HHHHHHHHhhhc--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHH
Q 013132 282 TYRSIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLA 359 (449)
Q Consensus 282 a~~~V~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~ 359 (449)
+.+....||..+ +....+.++|.++++..+++.+.+++|..... +..+.+ ....+..++.+|++.+...+++
T Consensus 168 aafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~--n~annl----~~d~l~am~ISgl~svgiSy~s 241 (309)
T COG5070 168 AAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG--NLANNL----SVDSLMAMFISGLCSVGISYCS 241 (309)
T ss_pred HHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc--hhhcCC----ChHHHHHHHHHHHHHhhhhhcc
Confidence 999988888654 45678899999999999999999888754321 111101 1123456788999999999999
Q ss_pred HHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH
Q 013132 360 TNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS 397 (449)
Q Consensus 360 ~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~ 397 (449)
-|+++-+|..++|+.+.+++....+.|.++||++.+.+
T Consensus 242 aWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~ 279 (309)
T COG5070 242 AWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL 279 (309)
T ss_pred ceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH
Confidence 99999999999999999999999999999999999975
No 17
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.82 E-value=6.2e-18 Score=166.70 Aligned_cols=257 Identities=15% Similarity=0.166 Sum_probs=173.0
Q ss_pred HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 013132 140 IFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVG--LPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSF 217 (449)
Q Consensus 140 ~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~--~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~ 217 (449)
..++.+|+..++-+ + ....+...+.+.+.+....+ .+..++.+++++...+..++.....+.+.+.++++.+++.
T Consensus 15 ~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 91 (281)
T TIGR03340 15 GWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGL 91 (281)
T ss_pred HHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhh
Confidence 34467886666522 3 23555555555554433222 2222233455566666666777788889999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc-cccHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 013132 218 THTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-SFNWTGFISAMISNIAFTYRSIYSKKAMTGMD 296 (449)
Q Consensus 218 a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~-~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~ 296 (449)
+..+..++|+++++++++++||++++++++|+.++++|+.+....+. +.+..|+.++++++++|+.+.++.|+..++.+
T Consensus 92 ~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~ 171 (281)
T TIGR03340 92 VYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVP 171 (281)
T ss_pred hhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchh
Confidence 99999999999999999999999999999999999999988765432 34567888999999999999999998755554
Q ss_pred hHH-HHHHHHHHHHHHH-HHHHHHh---hchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHH
Q 013132 297 STN-VYAYTSIIALLFC-IPPAVLI---EGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTH 371 (449)
Q Consensus 297 ~~~-l~~~~s~~s~l~L-lp~al~~---e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~ 371 (449)
+.. ...+. ..+.++. .|+.... +....... .. ..+..+...++....-+...+..+++.++.+.
T Consensus 172 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~ 240 (281)
T TIGR03340 172 AFYSALGYL-GIGFLAMGWPFLLLYLKRHGRSMFPY-------AR---QILPSATLGGLMIGGAYALVLWAMTRLPVATV 240 (281)
T ss_pred cccccHHHH-HHHHHHHHHHHHHHHHHHhccchhhh-------HH---HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEE
Confidence 422 11121 1222222 2332221 11110000 00 11111122222222223333458899999999
Q ss_pred HHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhh
Q 013132 372 AVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFC 410 (449)
Q Consensus 372 Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~l 410 (449)
+...++.|++++++|++++||+++. +.+|+++++.|+++
T Consensus 241 ~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 241 VALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred EeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999998 68899999999875
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.78 E-value=9.7e-16 Score=149.64 Aligned_cols=258 Identities=16% Similarity=0.176 Sum_probs=179.0
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Q 013132 143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIK 222 (449)
Q Consensus 143 i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iik 222 (449)
...|...+....+......|++.+.+..+.....+...+.+..++.++..+..++.......+.+.++++++++.++++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 103 (292)
T COG0697 24 IALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLII 103 (292)
T ss_pred HHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 44555555423245555669888877643333322111111122234555666666777788899999999999999999
Q ss_pred hhHHHHHHHHHH-HHcCcccChhhHHHHHHHHhhhhhhcccccccc---HHHHHHHHHHHHHHHHHHHHHHhhhcCCChH
Q 013132 223 ALEPFFNAAASQ-FVLGHQIPLSLWLSLAPVVIGVSMASLTELSFN---WTGFISAMISNIAFTYRSIYSKKAMTGMDST 298 (449)
Q Consensus 223 s~~Pift~lls~-l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~---~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~ 298 (449)
++.|+++.+++. ++++||++++++.+++.++.|+.++...+...+ ..|..++++++++++++.++.|+.. +.++.
T Consensus 104 ~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~ 182 (292)
T COG0697 104 GLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-RLGPV 182 (292)
T ss_pred HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChH
Confidence 999999999997 777999999999999999999999987765433 5899999999999999999999987 66665
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHH-HHHHHHHHHhhccChhHHHHHhh
Q 013132 299 NVYA-YTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYH-LYNQLATNTLERVAPLTHAVGNV 376 (449)
Q Consensus 299 ~l~~-~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~-~~~~~~~~~l~~isp~t~Si~~~ 376 (449)
.... +..........+... .+.+ ....+. .+..+...|+... ......+..+++.++...+....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~----------~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 249 (292)
T COG0697 183 TLALLLQLLLALLLLLLFFL-SGFG--APILSR----------AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSL 249 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cccc--ccCCHH----------HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 5554 333322222222221 1111 011110 1111222222222 12233345789999999999999
Q ss_pred hhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 377 LKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 377 lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
..++.+++.+++++||+++. +.+|+++++.|+.+.+.+
T Consensus 250 ~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 250 LEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999997 688999999999999776
No 19
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.3e-17 Score=152.65 Aligned_cols=268 Identities=14% Similarity=0.149 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHHHh-----------hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013132 136 FLNVIFNILNKKVYN-----------YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHV 204 (449)
Q Consensus 136 ~~s~~~~i~nK~~l~-----------~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~ 204 (449)
.+.+.+.+..+++.. .|.|...+.++|+.+..++.-+....+. ..+.|+..-+....+++-+...++
T Consensus 23 vCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~--~~~~D~t~~~~YaAcs~sYLlAMV 100 (337)
T KOG1580|consen 23 VCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRK--KTEIDNTPTKMYAACSASYLLAMV 100 (337)
T ss_pred heehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecc--cccccCCcchHHHHHHHHHHHHHH
Confidence 334444556665544 2778889999999988887644333222 223344445667788888888899
Q ss_pred HHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc-------cccHHHHHHHHHH
Q 013132 205 MSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-------SFNWTGFISAMIS 277 (449)
Q Consensus 205 ~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~-------~f~~~G~l~~l~s 277 (449)
.+|.+++|++-++..+-|++.|+-+.+++.++.+++.+|++++.+++++.|+++..+.|. ....+|-++.++|
T Consensus 101 ssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lS 180 (337)
T KOG1580|consen 101 SSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILS 180 (337)
T ss_pred hccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999876542 1224788999999
Q ss_pred HHHHHHHHHHHHhhhcC--CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHH
Q 013132 278 NIAFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLY 355 (449)
Q Consensus 278 ~l~~a~~~V~~kk~~~~--~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~ 355 (449)
.-..++....+.+.... -+...++.++++.+.+.+-.-.++ .|.. ++ +.. +.+. .+..++.+...+++..+-
T Consensus 181 L~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lf-TGEl-we--F~y-F~~R-hP~~~~~l~l~ai~s~LG 254 (337)
T KOG1580|consen 181 LAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLF-TGEL-WE--FFY-FVQR-HPYVFWDLTLLAIASCLG 254 (337)
T ss_pred HHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhhee-hhhH-HH--HHH-HHHh-ccHHHHHHHHHHHHHHhh
Confidence 99999988888776543 355788889999998877655443 3322 12 111 1111 124556677778888888
Q ss_pred HHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132 356 NQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS 411 (449)
Q Consensus 356 ~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly 411 (449)
++.-|..+...||++.|+..+-++.++++.|+++|++++++ |++|..++..|...=
T Consensus 255 Q~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 255 QWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred hHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 88888999999999999999999999999999999999998 788988888776654
No 20
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.74 E-value=1.7e-16 Score=149.76 Aligned_cols=286 Identities=16% Similarity=0.175 Sum_probs=216.1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhh--C-CchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013132 120 ERFPALVTGFFFFMWYFLNVIFNILNKKVYNY--F-PYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVA 196 (449)
Q Consensus 120 ~~~~~l~i~~~~~~w~~~s~~~~i~nK~~l~~--f-p~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~g 196 (449)
+++++.++.+.+...++....+....+++++. | |+.|.+|++|+++-..+-++-......++..+ -|+....++
T Consensus 37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~i---P~rtY~~la 113 (367)
T KOG1582|consen 37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVI---PWRTYVILA 113 (367)
T ss_pred cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceec---chhHhhhhH
Confidence 34456677777777767777777888888875 4 48899999999886554433222122222222 377888888
Q ss_pred HHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc----ccccHHHHH
Q 013132 197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE----LSFNWTGFI 272 (449)
Q Consensus 197 l~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e----~~f~~~G~l 272 (449)
.+..+.+.+++-|+.|.+-+...+.|++.-+-+.+.+.++-|+|.++..+.+..+...|+++.+..| .+||..|++
T Consensus 114 ~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~ 193 (367)
T KOG1582|consen 114 FLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVM 193 (367)
T ss_pred hhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHH
Confidence 8888889999999999999999999999999999999999999999999999999999999987665 478999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcC--CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHH
Q 013132 273 SAMISNIAFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGM 350 (449)
Q Consensus 273 ~~l~s~l~~a~~~V~~kk~~~~--~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv 350 (449)
+.-.+.++.|+-.-.+.|.++. -+..++.+|...+|.+.++...... +.-..+ |.. ..+.++. .+...++.++
T Consensus 194 mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlT-ge~f~a--~~f-caehp~~-tyGy~~~~s~ 268 (367)
T KOG1582|consen 194 MISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLT-GELFSA--WTF-CAEHPVR-TYGYAFLFSL 268 (367)
T ss_pred HHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhc-ccchhh--hHH-HHhCcHh-HHHHHHHHHH
Confidence 9999999999988888888764 3457888899999998887766654 221211 211 2233332 2222233333
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhh
Q 013132 351 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNI 413 (449)
Q Consensus 351 ~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~ 413 (449)
..|+-.......++.-++.+....++.++.+++++|.++|..|+|-| ..++.+++.|+++--.
T Consensus 269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~y 332 (367)
T KOG1582|consen 269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMY 332 (367)
T ss_pred HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcc
Confidence 33333333334688889999999999999999999999999999987 7899999999998643
No 21
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.74 E-value=2.8e-15 Score=145.59 Aligned_cols=238 Identities=12% Similarity=0.053 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHH-HhCCCC----C-CCCCH-HHHHHHHHHHHHH
Q 013132 127 TGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSW-TVGLPQ----R-APINK-ELLVILTPVAFCH 199 (449)
Q Consensus 127 i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~-~~~~~~----~-~~~~~-~~~~~~l~~gl~~ 199 (449)
.....++|.... ++.|. +.+.+ |..+.++|++++.+++++.. ..++++ + ++.++ +.+......|++.
T Consensus 7 ~i~a~~~wg~~~----~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 80 (256)
T TIGR00688 7 SLLASFLFGYMY----YYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI 80 (256)
T ss_pred HHHHHHHHHHHH----HHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 334445565433 46787 45677 99999999999987765432 222211 0 11122 2344566777777
Q ss_pred HHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHH
Q 013132 200 ALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI 279 (449)
Q Consensus 200 ~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l 279 (449)
.....+.++|+++++++.+.++..+.|+|+++++.+++|||++++++++++++++|+++...++.+.+ .+++++++
T Consensus 81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~ 156 (256)
T TIGR00688 81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAF 156 (256)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHH
Confidence 77889999999999999999999999999999999999999999999999999999987754333222 35788999
Q ss_pred HHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHH---h-hchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHH
Q 013132 280 AFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVL---I-EGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLY 355 (449)
Q Consensus 280 ~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~---~-e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~ 355 (449)
+|+.|.+..|+..+ .+..+... +.+.+.|.... . +.+...... ....| ..++..|++...-
T Consensus 157 ~~a~~~i~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~~l~~~g~~t~i~ 221 (256)
T TIGR00688 157 SFTAYGLIRKALKN-TDLAGFCL-----ETLSLMPVAIYYLLQTDFATVQQTN-----PFPIW----LLLVLAGLITGTP 221 (256)
T ss_pred HHHHHHHHHhhcCC-CCcchHHH-----HHHHHHHHHHHHHHHhccCcccccC-----chhHH----HHHHHHHHHHHHH
Confidence 99999999998753 23322221 12222333221 1 111000000 00011 1122222222222
Q ss_pred HHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHh
Q 013132 356 NQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVV 389 (449)
Q Consensus 356 ~~~~~~~l~~isp~t~Si~~~lk~v~~il~sill 389 (449)
..+.+..+++.++.+.+...+++|+++.++++++
T Consensus 222 ~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 222 LLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 3333458999999999999999999999999764
No 22
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.73 E-value=1.3e-15 Score=146.44 Aligned_cols=282 Identities=14% Similarity=0.111 Sum_probs=211.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh--------hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013132 125 LVTGFFFFMWYFLNVIFNILNKKVYN--------YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVA 196 (449)
Q Consensus 125 l~i~~~~~~w~~~s~~~~i~nK~~l~--------~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~g 196 (449)
..+.+.+..-|..-....++.+.+.+ .|..|.++.+.|-+++.+.-..... ..++. ....+.|.....++
T Consensus 13 ~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~-~~k~~-~~~~apl~~y~~is 90 (327)
T KOG1581|consen 13 ILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLK-WWKKE-LSGVAPLYKYSLIS 90 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHh-ccccc-CCCCCchhHHhHHH
Confidence 33444444444545555566666554 2667999999999888776533322 22222 22345677788889
Q ss_pred HHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc---------ccc
Q 013132 197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL---------SFN 267 (449)
Q Consensus 197 l~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~---------~f~ 267 (449)
+.+....++++.||+|++-++..+-|++.-+-+++++.++.++|++..+++...++.+|+.+....+. ...
T Consensus 91 ~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns 170 (327)
T KOG1581|consen 91 FTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENS 170 (327)
T ss_pred HHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999988754321 245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHH
Q 013132 268 WTGFISAMISNIAFTYRSIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDL 345 (449)
Q Consensus 268 ~~G~l~~l~s~l~~a~~~V~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l 345 (449)
+.|+.++....+..++.|..++++.+ ++++++++++.++++++......+ ..+.....-.+ .. -.++++.++
T Consensus 171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li-~qg~~~~av~F---~~--~hp~~~~Di 244 (327)
T KOG1581|consen 171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLI-LQGHLLPAVSF---IK--EHPDVAFDI 244 (327)
T ss_pred hHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhh-cCCCCchHHHH---HH--cChhHHHHH
Confidence 89999999999999999999999887 468999999999999887765522 22221111111 11 123566667
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhHHHHHHHHHhhhhhhhhh
Q 013132 346 FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTASFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 346 ~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~~iGg~lil~Gv~ly~~~ 414 (449)
++.++++..-+..-|..+++-||++..+.++.+.++++.+|.++||++++.++.++.++++|...++..
T Consensus 245 ~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 245 LLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence 776666665555567789999999999999999999999999999999999666556666666666544
No 23
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.69 E-value=9.1e-16 Score=137.02 Aligned_cols=144 Identities=26% Similarity=0.376 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcC-------CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhc-hhHH
Q 013132 270 GFISAMISNIAFTYRSIYSKKAMTG-------MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVG-LFKF 341 (449)
Q Consensus 270 G~l~~l~s~l~~a~~~V~~kk~~~~-------~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~-~~~~ 341 (449)
|++++++|+++.++++++.|+.+++ .+++++++|+++.+.++++|.+++.|+++..+......-.+.. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7899999999999999999997754 5789999999999999999999998887754321111000111 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhh
Q 013132 342 LSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNI 413 (449)
Q Consensus 342 ~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~ 413 (449)
+..++.+|++++++|+..|.+++++||+++++.+++|+++.++.|+++|||++|+ +..|.++.+.|.++|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 6677889999999999999999999999999999999999999999999999998 58899999999999963
No 24
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.64 E-value=1.5e-13 Score=136.18 Aligned_cols=257 Identities=18% Similarity=0.162 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013132 128 GFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSW-TVGLPQRAPINKELLVILTPVAFCHALGHVMS 206 (449)
Q Consensus 128 ~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~-~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~ 206 (449)
..-+++|+.... ..|++. .++.++.. |+.++.+++.... ..+.+++ ..++.+..-+..|++..+++.++
T Consensus 7 lia~~~wGs~g~----~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~~~~--~~~~~~~~g~l~G~~w~ig~~~~ 76 (290)
T TIGR00776 7 LIPALFWGSFVL----INVKIG-GGPYSQTL---GTTFGALILSIAIAIFVLPEF--WALSIFLVGLLSGAFWALGQINQ 76 (290)
T ss_pred HHHHHHHhhhHH----HHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhCCcc--cccHHHHHHHHHHHHHHhhhhhH
Confidence 344566765544 345554 44434433 6767766554322 2222221 12455565667777788889999
Q ss_pred HHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhh----HHHHHHHHhhhhhhcccccc-------cc-HHHHHH
Q 013132 207 NVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSL----WLSLAPVVIGVSMASLTELS-------FN-WTGFIS 273 (449)
Q Consensus 207 ~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~----~lsllliv~Gv~L~~~~e~~-------f~-~~G~l~ 273 (449)
+.+.++++++.+..+-+ +.+++..+++.+++||+.+.++ ++++++++.|+.+....+.+ .+ ..|+++
T Consensus 77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~ 156 (290)
T TIGR00776 77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILL 156 (290)
T ss_pred HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHH
Confidence 99999999999988888 8888999999999999999999 99999999999987643211 33 689999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCChHHH---HHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHH
Q 013132 274 AMISNIAFTYRSIYSKKAMTGMDSTNV---YAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGM 350 (449)
Q Consensus 274 ~l~s~l~~a~~~V~~kk~~~~~~~~~l---~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv 350 (449)
++++.++|+++.+..|+. +.|+.+. +++...++.+++.+... ...+.. .+ ..+.. +..|+
T Consensus 157 ~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~---------~~----~~~~~-~~~Gi 219 (290)
T TIGR00776 157 LLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGHI-LAKPLK---------KY----AILLN-ILPGL 219 (290)
T ss_pred HHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHHh-cccchH---------HH----HHHHH-HHHHH
Confidence 999999999999999986 4788777 44433334443333221 011110 01 11112 22555
Q ss_pred HHHHHHHHHHHHhh-ccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HH----HHHHHHHhhhhhh
Q 013132 351 FYHLYNQLATNTLE-RVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SF----HDLCADIHPEFCS 411 (449)
Q Consensus 351 ~~~~~~~~~~~~l~-~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~----iGg~lil~Gv~ly 411 (449)
.....+...+...+ +.++.+.++...++|+.+++.++++++|+.++ +. +|.++++.|+.+.
T Consensus 220 ~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~ 286 (290)
T TIGR00776 220 MWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANIL 286 (290)
T ss_pred HHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence 53333333345677 99999999999999999999999999999997 56 8889999988765
No 25
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.62 E-value=4e-13 Score=126.26 Aligned_cols=246 Identities=15% Similarity=0.168 Sum_probs=189.8
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHh
Q 013132 144 LNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKA 223 (449)
Q Consensus 144 ~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks 223 (449)
+.|.++..++ |.-.+++|..++.++++..+.-+ +.+.++++|..++.-|+.....+.+.|.|++.++.+.+..+-.
T Consensus 30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~RPw---r~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF 105 (292)
T COG5006 30 FAKSLFPLVG-AAGVTALRLAIAALILLALFRPW---RRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF 105 (292)
T ss_pred HHHHHccccC-hhhHHHHHHHHHHHHHHHHhhHH---HhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence 4677777777 88999999999999887766433 3345788899999999988888899999999999999999999
Q ss_pred hHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc---ccccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHH
Q 013132 224 LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNV 300 (449)
Q Consensus 224 ~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e---~~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l 300 (449)
+-|+.+++++. +|. +..+.+.+.+.|+.+..... .+.|..|..+++.+..||+.|.+..||.-+..+....
T Consensus 106 ~GPL~vA~~~s----Rr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g 179 (292)
T COG5006 106 TGPLAVALLSS----RRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAG 179 (292)
T ss_pred ccHHHHHHHhc----cch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchH
Confidence 99997776653 333 34444555777777664322 3468999999999999999999999998777777888
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHH-HHHHHHhhccChhHHHHHhhhhH
Q 013132 301 YAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYN-QLATNTLERVAPLTHAVGNVLKR 379 (449)
Q Consensus 301 ~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~-~~~~~~l~~isp~t~Si~~~lk~ 379 (449)
..+.+..+.++.+|+.....++.+... .++..-+..++++...- .+..-.+++.++-++++...++|
T Consensus 180 ~a~gm~vAaviv~Pig~~~ag~~l~~p------------~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLeP 247 (292)
T COG5006 180 VAVGMLVAALIVLPIGAAQAGPALFSP------------SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEP 247 (292)
T ss_pred HHHHHHHHHHHHhhhhhhhcchhhcCh------------HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhH
Confidence 888899999999999886555544321 12222233344443322 23334789999999999999999
Q ss_pred HHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132 380 VFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS 411 (449)
Q Consensus 380 v~~il~sillfge~ls~-~~iGg~lil~Gv~ly 411 (449)
.++.+.|++++||.+|+ |+.|..+++.+..-.
T Consensus 248 a~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~ 280 (292)
T COG5006 248 ALAALSGLIFLGETLTLIQWLAIAAVIAASAGS 280 (292)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999997 788988888776644
No 26
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.58 E-value=2.4e-13 Score=131.29 Aligned_cols=208 Identities=16% Similarity=0.197 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc--
Q 013132 187 ELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-- 264 (449)
Q Consensus 187 ~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~-- 264 (449)
++...+...++++++.+.+.+.++++++++.+++++.+..++|++++++++|+|++.++|+++++.+.|+.+....+.
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 445556677788999999999999999999999999999999999999999999999999999999999998753211
Q ss_pred -------c--------ccHHHHHHHHHHHHHHHHHHHHHHhhhcCC--ChHHHHHHHHHHHHHHHHHHHHHhhchhhhhh
Q 013132 265 -------S--------FNWTGFISAMISNIAFTYRSIYSKKAMTGM--DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQY 327 (449)
Q Consensus 265 -------~--------f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~--~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~ 327 (449)
+ ....|+++.++++++.++..++.+|.+|+- +.+......+..|.++.++...+.++....+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~ 174 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISES 174 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccC
Confidence 1 125899999999999999999999999864 44555556667777776666555454443333
Q ss_pred hHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHH
Q 013132 328 GFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLC 402 (449)
Q Consensus 328 ~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~ 402 (449)
++.+.+ ++ ..+..++..++.+.... ..+++.+.+.-.....+.-+++.+.++++||.+++.. .+|.+
T Consensus 175 g~f~G~---~~-~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 175 GFFHGY---SW-WVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred Cchhhc---ch-HHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 332211 11 12222333333333333 3789999999999999999999999999999999985 55644
No 27
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.57 E-value=7.2e-13 Score=125.98 Aligned_cols=260 Identities=16% Similarity=0.194 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc----
Q 013132 189 LVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL---- 264 (449)
Q Consensus 189 ~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~---- 264 (449)
.+..++-+++-..+..+-++++.+++++.+|+++...-+|+.+++..+++++++.++|++++.++.|++++...|.
T Consensus 86 p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~ 165 (372)
T KOG3912|consen 86 PVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT 165 (372)
T ss_pred cceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc
Confidence 3456678899888888899999999999999999999999999999999999999999999999999998765432
Q ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHhhhc--CCChHHHHHHHHHHHHHHHHHHH----HHhhc------hhhhh
Q 013132 265 ------SFNWTGFISAMISNIAFTYRSIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPA----VLIEG------PQLMQ 326 (449)
Q Consensus 265 ------~f~~~G~l~~l~s~l~~a~~~V~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~a----l~~e~------~~~~~ 326 (449)
+.-..|.++.+++-+..|.+.++-+|.++ +++|.+...|..++|.+++...+ .+..+ +.-.-
T Consensus 166 ~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~ 245 (372)
T KOG3912|consen 166 DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVL 245 (372)
T ss_pred CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcch
Confidence 23368999999999999999999888776 46789999999888866543333 22111 11101
Q ss_pred hhHHHHHhhhch-hHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHH
Q 013132 327 YGFKAAIAKVGL-FKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCAD 404 (449)
Q Consensus 327 ~~~~~~~~~~~~-~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~li 404 (449)
.+|.+.+...+- +.+...+...-+.-.++|+......+..|+.|-++...++..+.-++++..+.|.++. |..|.++.
T Consensus 246 eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliL 325 (372)
T KOG3912|consen 246 EDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLIL 325 (372)
T ss_pred hhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence 234444433221 1122111111122234577666788899999999999999999999999999999997 78999999
Q ss_pred Hhhhhhhhhhh--hhhhhhcCC-CchhhhhhhccccccccccCCCCC
Q 013132 405 IHPEFCSNIRF--SWQAQFLRP-SSFVAYQYYCSHKETRILDRKPSI 448 (449)
Q Consensus 405 l~Gv~ly~~~~--~~q~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 448 (449)
+.|+++||... .+.+....+ -+..+-+.+|-+++++|=++.+.|
T Consensus 326 i~Gi~lY~~il~~~w~r~~~~p~lae~~~~~r~gg~~~pi~~~~~~~ 372 (372)
T KOG3912|consen 326 IMGIILYNQILFLDWYRAAVAPWLAERYVDLRTGGAAAPISRPADVI 372 (372)
T ss_pred HHHHHHHHHHHhhhhhhhhhcchHHHHHHHhccCCcCCCcccccccC
Confidence 99999998663 333333333 333333447888888887776643
No 28
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.45 E-value=1.3e-14 Score=136.92 Aligned_cols=270 Identities=16% Similarity=0.096 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013132 126 VTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVM 205 (449)
Q Consensus 126 ~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~ 205 (449)
.+.+..+- |++|.++.+..|...+ .|..+...|+++-.+..+++....+..... +...-+.++..|++.+.+...
T Consensus 39 gl~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~v~g-p~g~R~~LiLRg~mG~tgvml 113 (346)
T KOG4510|consen 39 GLLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQPVIG-PEGKRKWLILRGFMGFTGVML 113 (346)
T ss_pred CceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeeeeec-CCCcEEEEEeehhhhhhHHHH
Confidence 33344444 5567777666654443 277777777655554444443221111100 111123345667777778888
Q ss_pred HHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc-----c---c------cccHHHH
Q 013132 206 SNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT-----E---L------SFNWTGF 271 (449)
Q Consensus 206 ~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~-----e---~------~f~~~G~ 271 (449)
.++|++|++.+.+.+|..++|+||.++++.++||++++...++.++.+.|+++.+-+ | . +.+..|.
T Consensus 114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt 193 (346)
T KOG4510|consen 114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGT 193 (346)
T ss_pred HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCch
Confidence 899999999999999999999999999999999999999999999999999987521 1 1 2345788
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHH
Q 013132 272 ISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMF 351 (449)
Q Consensus 272 l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 351 (449)
..++.+++.-+.-.++.|+.-++.+......|-+.++++.-+.........++.+ ... ++ +.++..|++
T Consensus 194 ~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~-cgk------dr----~l~~~lGvf 262 (346)
T KOG4510|consen 194 VAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPH-CGK------DR----WLFVNLGVF 262 (346)
T ss_pred HHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCc-ccc------ce----EEEEEehhh
Confidence 8888888888877788888878888765555656666665544333222112211 111 11 123456788
Q ss_pred HHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhh
Q 013132 352 YHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCS 411 (449)
Q Consensus 352 ~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly 411 (449)
++..++...+.+++-.+...++..+..-+++.+..+++|||.+++. +.|+++++......
T Consensus 263 gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 263 GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 8877777778888777777888999999999999999999999986 45555544444433
No 29
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.45 E-value=1.7e-10 Score=111.28 Aligned_cols=264 Identities=13% Similarity=0.166 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH--HHhCCCCCCC--CCHHHHHHHHHHHHHHHHHHHH
Q 013132 130 FFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVS--WTVGLPQRAP--INKELLVILTPVAFCHALGHVM 205 (449)
Q Consensus 130 ~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~--~~~~~~~~~~--~~~~~~~~~l~~gl~~~~~~~~ 205 (449)
.-++|+..-. +-| .++..| +.-+..-|...+..+++.. ..++.+...+ -+++.+......+++.+.+...
T Consensus 15 Ay~lwG~lp~----y~k-ll~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~l 88 (293)
T COG2962 15 AYLLWGLLPL----YFK-LLEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWL 88 (293)
T ss_pred HHHHHHHHHH----HHH-HHccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 3355655443 344 446666 7778888988877765432 2222111111 0223455555666666666677
Q ss_pred HHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHHHHHHH
Q 013132 206 SNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRS 285 (449)
Q Consensus 206 ~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~~a~~~ 285 (449)
..||...--+=-+..-....|++.++++++++|||+++.+++++.+..+||..-.....++.|..+.. +++|++|.
T Consensus 89 fiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Yg 164 (293)
T COG2962 89 FIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLYG 164 (293)
T ss_pred hheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHHH
Confidence 77888876666677778889999999999999999999999999999999999988888888776644 56799998
Q ss_pred HHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhh-chhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013132 286 IYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIE-GPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLE 364 (449)
Q Consensus 286 V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e-~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~ 364 (449)
..-|+. ++|+.+-...-.+.-....+...++.+ .++.. ...+. .....++..|.....--.+-....+
T Consensus 165 l~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~--------~~~~~-~~~~LLv~aG~vTavpL~lf~~aa~ 233 (293)
T COG2962 165 LLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQFL--------QQNAN-SLWLLLVLAGLVTAVPLLLFAAAAK 233 (293)
T ss_pred HHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhh--------hcCCc-hHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 777765 566655443333222222222222222 22111 00111 2233345555544222111123678
Q ss_pred ccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 365 RVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 365 ~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
+++=.+.++..++.|....+++++++||+++. +.+..+.+-.|+.+|...
T Consensus 234 ~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d 284 (293)
T COG2962 234 RLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID 284 (293)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999997 688889998998888655
No 30
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.44 E-value=2.1e-12 Score=127.52 Aligned_cols=221 Identities=15% Similarity=0.176 Sum_probs=167.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc--
Q 013132 187 ELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-- 264 (449)
Q Consensus 187 ~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~-- 264 (449)
+..|..+..+.+....++++|.||.|++++..+++.++.-+||..++.++.+||+++.+.+++++.++|+++++.+|.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 445555666666667789999999999999999999999999999999999999999999999999999999987632
Q ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHhhhcC----CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHh
Q 013132 265 ------SFNWTGFISAMISNIAFTYRSIYSKKAMTG----MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIA 334 (449)
Q Consensus 265 ------~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~----~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~ 334 (449)
+-...|.++++++++.||.|.++.||...+ +|--.+..+..++..+++.|..++.+.-........
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP---- 312 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELP---- 312 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCC----
Confidence 234789999999999999999999987653 344556667888888888888766532211111110
Q ss_pred hhchhHHHHHHHHHH-HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132 335 KVGLFKFLSDLFWIG-MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN 412 (449)
Q Consensus 335 ~~~~~~~~~~l~~~g-v~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~ 412 (449)
... ++. .+++.+ +..+.--+.+.+..-.++|++..+...+...++++..+++=|.++++ ..+|.+.++.|.+..|
T Consensus 313 ~~~--q~~-~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 313 SST--QFS-LVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred CCc--eeE-eeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence 000 111 111122 11222223333466689999999999999999999999999999998 5889889999999888
Q ss_pred hh
Q 013132 413 IR 414 (449)
Q Consensus 413 ~~ 414 (449)
..
T Consensus 390 ~~ 391 (416)
T KOG2765|consen 390 IS 391 (416)
T ss_pred cc
Confidence 77
No 31
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.38 E-value=4e-10 Score=111.50 Aligned_cols=217 Identities=15% Similarity=0.203 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc-----
Q 013132 189 LVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE----- 263 (449)
Q Consensus 189 ~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e----- 263 (449)
...+...++++++.+.+.+.++.+.+++++++...+..+.|+++.++++++|.++++|.++++.+.|+.+...++
T Consensus 92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~ 171 (345)
T KOG2234|consen 92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG 171 (345)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 334555667888887799999999999999999999999999999999999999999999999999999986221
Q ss_pred ------ccccHHHHHHHHHHHHHHHHHHHHHHhhhcC--CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhh
Q 013132 264 ------LSFNWTGFISAMISNIAFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAK 335 (449)
Q Consensus 264 ------~~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~--~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~ 335 (449)
.+..+.|+...+.+++..++..+|.+|.+|+ .+-+......+.+|.+..+...+..|+......++. .
T Consensus 172 a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff---~- 247 (345)
T KOG2234|consen 172 AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFF---Y- 247 (345)
T ss_pred ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCcc---c-
Confidence 1124789999999999999999999999975 444444444455666655555444444333212221 1
Q ss_pred hchhH-HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhh
Q 013132 336 VGLFK-FLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNI 413 (449)
Q Consensus 336 ~~~~~-~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~ 413 (449)
|+.. .+..++..++.+-+..+ .+++.+-..-.....+..+++.+.|+.+||-++|.. .+|..+++..+++|+.
T Consensus 248 -G~s~~vw~vVl~~a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~ 322 (345)
T KOG2234|consen 248 -GYSSIVWLVVLLNAVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSL 322 (345)
T ss_pred -cccHHHHHHHHHHhccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhc
Confidence 2222 22223333443333332 567777777777777888999999999999999985 8899999999999984
Q ss_pred h
Q 013132 414 R 414 (449)
Q Consensus 414 ~ 414 (449)
.
T Consensus 323 ~ 323 (345)
T KOG2234|consen 323 Y 323 (345)
T ss_pred C
Confidence 3
No 32
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.34 E-value=6.9e-12 Score=119.23 Aligned_cols=261 Identities=14% Similarity=0.149 Sum_probs=188.7
Q ss_pred HHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHH
Q 013132 143 ILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVSWT-VGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFAT-VAVSFTH 219 (449)
Q Consensus 143 i~nK~~l~~fp-~P~~lt~~r~l~~~l~lli~~~-~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~-vsvs~a~ 219 (449)
++-+.+.++.| ...++|+.|+++-+.--++..- .... +++++.+++.. .+ .++.+..+++|.++++ ++.+...
T Consensus 20 v~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~-k~kiplk~Y~i--~V-~mFF~vnv~NN~al~f~I~~PlHi 95 (330)
T KOG1583|consen 20 VFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTV-KPKIPLKDYAI--TV-AMFFIVNVTNNYALKFNIPMPLHI 95 (330)
T ss_pred HHHHHHHHhCCCCeeehHHHHHHHHHHhceeeecccccc-CCCCchhhhhe--eh-heeeeeeeeccceeeecccceEEE
Confidence 44556666665 3467888999876654333221 1211 24555544332 22 3344557899999996 8999999
Q ss_pred HHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc---cc--------------ccc--HHHHHHHHHHHHH
Q 013132 220 TIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT---EL--------------SFN--WTGFISAMISNIA 280 (449)
Q Consensus 220 iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~---e~--------------~f~--~~G~l~~l~s~l~ 280 (449)
++++..++-++.+++++.|+|.+.+++.+.+++.+|+++++.. |. ++. ..|+.+...+.+.
T Consensus 96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~ 175 (330)
T KOG1583|consen 96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLL 175 (330)
T ss_pred EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987632 11 111 3688888889999
Q ss_pred HHHHHHHHHhhhcC--CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhh-------hc--hhHHHHHHHHHH
Q 013132 281 FTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAK-------VG--LFKFLSDLFWIG 349 (449)
Q Consensus 281 ~a~~~V~~kk~~~~--~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~-------~~--~~~~~~~l~~~g 349 (449)
.|...++++...++ .++-+.++|+-.++.. ..++...+... .|..+... .| .+..+..+++..
T Consensus 176 sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP----~Flf~~~div~--~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~ 249 (330)
T KOG1583|consen 176 SAYMGIYQETTYQKYGKHWKEALFYTHFLSLP----LFLFMGDDIVS--HWRLAFKSESYLIPLLGFKVPSMWVYLLFNV 249 (330)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhccc----hHHHhcchHHH--HHHHHhcCcceeccccCccccHHHHHHHHHH
Confidence 99988988876664 5788999999876644 43443332221 22222221 11 234455667777
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhh
Q 013132 350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNI 413 (449)
Q Consensus 350 v~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~ 413 (449)
+..|..--..|.+-.+++++|.+++-++++.+..++|++.|++++++ .++|.+++.+|.++|..
T Consensus 250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 77776666667788899999999999999999999999999999998 59999999999999853
No 33
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.16 E-value=4.2e-10 Score=95.88 Aligned_cols=118 Identities=17% Similarity=0.305 Sum_probs=97.7
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHhhcccchHHH
Q 013132 141 FNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVS-WTVGLPQRAPINKELLVILTPVAFC-HALGHVMSNVSFATVAVSFT 218 (449)
Q Consensus 141 ~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~-~~~~~~~~~~~~~~~~~~~l~~gl~-~~~~~~~~~~sL~~vsvs~a 218 (449)
+.+++|+..++++ |...+.+|+.++.+ +++. ...+..+....+.+++...+..+++ ...+..+.+.++++.+++.+
T Consensus 6 ~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 83 (126)
T PF00892_consen 6 YSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV 83 (126)
T ss_pred HHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence 3467899999888 89999999999987 4332 2222222345566777778888877 57788999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132 219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (449)
Q Consensus 219 ~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~ 260 (449)
+++..++|+++++++++++||++++++++|++++++|+++..
T Consensus 84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998764
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.95 E-value=6.8e-09 Score=98.79 Aligned_cols=188 Identities=14% Similarity=0.120 Sum_probs=126.5
Q ss_pred cchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc-------------------c--------c
Q 013132 213 VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE-------------------L--------S 265 (449)
Q Consensus 213 vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e-------------------~--------~ 265 (449)
++++.....|+..++++++.+..+.+++.+..++++..++..|+......+ . .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 567778889999999999999999999999999999999999987532111 0 1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHH-----HHhhchhhhhhhHHHHHhhhchhH
Q 013132 266 FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPA-----VLIEGPQLMQYGFKAAIAKVGLFK 340 (449)
Q Consensus 266 f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~a-----l~~e~~~~~~~~~~~~~~~~~~~~ 340 (449)
..+.|....+.+.++.++..++.++..++.+.. .|...++..++.+.. ...++......++ ..+++.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 153 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM---FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF-----FIGYPT 153 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc---hHHHHHHHHHHHHHHHHHHHhhcccchhhccCc-----ccCCch
Confidence 236788888889999999999999987654321 333333332222221 1111111101110 011112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132 341 FLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS 411 (449)
Q Consensus 341 ~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly 411 (449)
..+.+++ .......+..+++++.++.+.++...+++++++++|+++|||+++. +.+|+.+++.|+++|
T Consensus 154 ~~~~~~~---~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 154 AVWIVGL---LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHH---HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 2222221 1222223344589999999999999999999999999999999998 588999999998876
No 35
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.87 E-value=4.1e-07 Score=88.34 Aligned_cols=209 Identities=16% Similarity=0.131 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH-hhHHHHHHHHHHHHcCcccChhhH----HHHHHHHhhhhhhc
Q 013132 186 KELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQIPLSLW----LSLAPVVIGVSMAS 260 (449)
Q Consensus 186 ~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e~~s~~~~----lsllliv~Gv~L~~ 260 (449)
.+.+...+..|++..++....+.|++++++|.+--+. ..+-+.+.+++++++||.-+...+ +++++++.|+.+.+
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 3677778899999999999999999999999887775 467788999999999998775544 58889999999988
Q ss_pred ccccc--------ccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHH
Q 013132 261 LTELS--------FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAA 332 (449)
Q Consensus 261 ~~e~~--------f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~ 332 (449)
..|.+ ....|+...+++.+.|..|.+.-|-. +.|++....=++ ++.++..............
T Consensus 122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~lPqa-iGm~i~a~i~~~~~~~~~~------- 191 (269)
T PF06800_consen 122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAFLPQA-IGMLIGAFIFNLFSKKPFF------- 191 (269)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhHHHHH-HHHHHHHHHHhhccccccc-------
Confidence 76532 12469999999999999999997763 577766655332 2222221111111111111
Q ss_pred HhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-H----HHHHHHHHhh
Q 013132 333 IAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-S----FHDLCADIHP 407 (449)
Q Consensus 333 ~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~----~iGg~lil~G 407 (449)
.+..+.. ++.|+.+-.-|...+...++.+..+.=...-+..+++.+.|+++++|+=+. + .+|.++++.|
T Consensus 192 -~k~~~~n-----il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G 265 (269)
T PF06800_consen 192 -EKKSWKN-----ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIG 265 (269)
T ss_pred -ccchHHh-----hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHh
Confidence 1111222 234444444444445566777777766677788999999999999998664 2 4577777777
Q ss_pred hhh
Q 013132 408 EFC 410 (449)
Q Consensus 408 v~l 410 (449)
..+
T Consensus 266 ~il 268 (269)
T PF06800_consen 266 AIL 268 (269)
T ss_pred hhc
Confidence 653
No 36
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.86 E-value=2.3e-08 Score=91.12 Aligned_cols=217 Identities=12% Similarity=0.062 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc--c
Q 013132 188 LLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL--S 265 (449)
Q Consensus 188 ~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~--~ 265 (449)
.++...|.+++.++.++.+..+++.++++.++.+.++.-.|+.+++++.+|+|+..-++++.++.++|+++.++.|. .
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 34556677788888889999999999999999999999999999999999999999999999999999999987654 3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHH-----HHHhhchhhhhhhHHHHHhhhchhH
Q 013132 266 FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPP-----AVLIEGPQLMQYGFKAAIAKVGLFK 340 (449)
Q Consensus 266 f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~-----al~~e~~~~~~~~~~~~~~~~~~~~ 340 (449)
.++.|+.+++.|+...++|.+..|....+-+--+...+++..++.=+... .+.+.+... |+. +...+|.-
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~----~qs-FA~~PWG~ 206 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEH----LQS-FAAAPWGC 206 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHH----HHH-HhhCCchh
Confidence 47899999999999999999999998765544444444454444433221 122222221 111 12223322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccc-hh-HHHHHHHHHhhhhhhhhh
Q 013132 341 FLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYF-TA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 341 ~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~l-s~-~~iGg~lil~Gv~ly~~~ 414 (449)
.. ..+.....+|+.....+..+.|...|+.............+ +++|.. +. ...|.+++..|..+.-.+
T Consensus 207 l~----G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDi-L~q~l~~ntl~La~T~iI~i~FiLiiiP 277 (290)
T KOG4314|consen 207 LC----GAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDI-LFQELEFNTLFLAATCIICIGFILIIIP 277 (290)
T ss_pred hh----hHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHH-HHHHHHHHHHHHHHHHHHHHhHHheecc
Confidence 22 11222223344333356778888888877655555556665 455544 44 477889999998887555
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.85 E-value=2.4e-08 Score=85.04 Aligned_cols=119 Identities=18% Similarity=0.263 Sum_probs=100.1
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH-HHhCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHH
Q 013132 141 FNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVS-WTVGLPQ-RAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFT 218 (449)
Q Consensus 141 ~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~-~~~~~~~-~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a 218 (449)
..++.|..+++.. |.+-+.+|-.+...++... ...|... ...++.+.|..+..-|+....+..+++.+++.-.+|..
T Consensus 18 ~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~V 96 (140)
T COG2510 18 TPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRV 96 (140)
T ss_pred HHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceE
Confidence 3478999999876 9999999999888776543 3333322 22356778888888888888889999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132 219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (449)
Q Consensus 219 ~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~ 260 (449)
.-+-.+.|+++++++.+++|||++.++|+|+++++.|+++.+
T Consensus 97 vPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 97 VPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred EEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 999999999999999999999999999999999999998765
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.83 E-value=2.1e-08 Score=85.33 Aligned_cols=105 Identities=16% Similarity=0.305 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHH-HHhCCCC--CCCCCHHHHHHHHHHHHHHH-HHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHH
Q 013132 160 VIHLLVGVVYCLVS-WTVGLPQ--RAPINKELLVILTPVAFCHA-LGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQF 235 (449)
Q Consensus 160 ~~r~l~~~l~lli~-~~~~~~~--~~~~~~~~~~~~l~~gl~~~-~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l 235 (449)
++|+++..+++... ...+..+ .+.+.++.+..++..|++.. .+..+.+.|+++.+ +....+.++.|+|+++++.+
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 46777777765433 2222211 01122234555666666654 67788999999999 58889999999999999999
Q ss_pred HcCcccChhhHHHHHHHHhhhhhhcccccc
Q 013132 236 VLGHQIPLSLWLSLAPVVIGVSMASLTELS 265 (449)
Q Consensus 236 ~l~e~~s~~~~lsllliv~Gv~L~~~~e~~ 265 (449)
++|||++++++++++++++|+++...+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999887754
No 39
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.71 E-value=5.5e-09 Score=98.67 Aligned_cols=215 Identities=10% Similarity=0.117 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc--
Q 013132 187 ELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-- 264 (449)
Q Consensus 187 ~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~-- 264 (449)
..|+..+.+|+.-.-++++-..|.||++..-...+-+-....+.+++++|+|.|..+.++.|+++..+|+.++...|.
T Consensus 76 ~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a 155 (336)
T KOG2766|consen 76 AKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA 155 (336)
T ss_pred HHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc
Confidence 457777788777666666666789999998888888866556899999999999999999999999999998865442
Q ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhch
Q 013132 265 ------SFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGL 338 (449)
Q Consensus 265 ------~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~ 338 (449)
+....|.++.++++-+||.-|+......++.|-.+++....++|+++-.+= ++.|......-.|. +
T Consensus 156 gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~-------~ 227 (336)
T KOG2766|consen 156 GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWD-------S 227 (336)
T ss_pred ccccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeeh-------H
Confidence 223689999999999999999999988889999999999899988877665 33454433221221 1
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhhh
Q 013132 339 FKFLSDL-FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNIR 414 (449)
Q Consensus 339 ~~~~~~l-~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~~ 414 (449)
.....+ +..++ +.+|.+. -.+++..|+..+.+.-.-...+++++ ..||-+++|. .+..+.++.|.++|..|
T Consensus 228 -~i~~yl~f~L~M-FllYsl~-pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 228 -AIFLYLRFALTM-FLLYSLA-PILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred -HHHHHHHHHHHH-HHHHHhh-HHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence 111111 11122 1223322 12577777777666555567777776 7888889996 78899999999999655
No 40
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.67 E-value=1.3e-07 Score=80.35 Aligned_cols=122 Identities=14% Similarity=0.163 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHH-HHHHHH
Q 013132 279 IAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMF-YHLYNQ 357 (449)
Q Consensus 279 l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~-~~~~~~ 357 (449)
++|+.+.++.|+..++.|+....++....+.+ +++...+.+.......+ ..... .+...|.+ ....+.
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLS---------PRQWL-WLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCC---------hhhhh-hhhHhhccceehHHH
Confidence 46889999999999999999999999999988 66666655433211111 10111 12233333 234444
Q ss_pred HHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132 358 LATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS 411 (449)
Q Consensus 358 ~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly 411 (449)
..+..++++++...++...+.|+++.++++++++|++++ +.+|.++++.|+++.
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 555689999999999999999999999999999999998 588999999998775
No 41
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.54 E-value=4.1e-06 Score=81.03 Aligned_cols=115 Identities=17% Similarity=0.091 Sum_probs=88.8
Q ss_pred HHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccchHHH
Q 013132 141 FNILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH-ALGHVMSNVSFATVAVSFT 218 (449)
Q Consensus 141 ~~i~nK~~l~~fp-~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~~~~sL~~vsvs~a 218 (449)
+++..|+..++.+ .+.....+++.++.+++++......+.. ..+.+.|...+..+++. .++..+.+.++++.+++.+
T Consensus 143 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 221 (260)
T TIGR00950 143 GTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA 221 (260)
T ss_pred HHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence 3467888876654 2345555788888877765443322222 33556677677777664 5678889999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhh
Q 013132 219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGV 256 (449)
Q Consensus 219 ~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv 256 (449)
.++..++|++++++++++++|+++..++.|..+++.|+
T Consensus 222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999986
No 42
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.46 E-value=1.2e-06 Score=74.69 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132 270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (449)
Q Consensus 270 G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (449)
-.++++++++.+++..++.|-.++++||..-+..-++...+++..+.......+. ... +.. ..+..++++|
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~-~~~----~~~----k~~lflilSG 74 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQA-GGE----IGP----KSWLFLILSG 74 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceec-ccc----cCc----ceehhhhHHH
Confidence 4688999999999999999999999999887777777777777666554322211 100 111 2333456677
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132 350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN 412 (449)
Q Consensus 350 v~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~ 412 (449)
+..-+-.++.|+.++.-.+....=..-..+++++++|++++||.++. +++|..++.+|..+..
T Consensus 75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 66555555566677665555444445578899999999999999997 6899999999987654
No 43
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.43 E-value=1.1e-05 Score=80.20 Aligned_cols=139 Identities=12% Similarity=0.084 Sum_probs=102.2
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHH
Q 013132 265 SFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSD 344 (449)
Q Consensus 265 ~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~ 344 (449)
+....|++++++++++|+...++.|.. .++++.++.++...++.+++++........+..... . ..+... ..
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~----~--~~~~~~-~~ 75 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL----I--QTPQKI-FM 75 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH----H--cCHHHH-HH
Confidence 345689999999999999999999865 679999999999999988887765433211110000 0 011111 11
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132 345 LFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS 411 (449)
Q Consensus 345 l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly 411 (449)
++..++....++.+.|..++.+++...++.....|+++.+++.++++|+++. +++|.++.+.|+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li 143 (296)
T PRK15430 76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ 143 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 2233333444556667789999999999999999999999999999999998 588888888887765
No 44
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.41 E-value=1.3e-05 Score=77.85 Aligned_cols=138 Identities=13% Similarity=0.226 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHH
Q 013132 269 TGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI 348 (449)
Q Consensus 269 ~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 348 (449)
.|++++++++++|+...+..|. ..++++.++.++-..++.+++++.............. ............+...
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 76 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIER----LKRIQKRPLILSLLLC 76 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHH----HhCcccchHHHHHHHH
Confidence 3889999999999999999998 4679999999999999988877765443211100000 1111111122233445
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132 349 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS 411 (449)
Q Consensus 349 gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly 411 (449)
|++....+.+.+..++++++.+.++.....|+++.+++.++++|+++. +.+|.++.+.|+.+.
T Consensus 77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 555555555666789999999999999999999999999999999998 577888888887654
No 45
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.36 E-value=1.6e-05 Score=81.31 Aligned_cols=121 Identities=12% Similarity=0.143 Sum_probs=87.9
Q ss_pred HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH-HHhCCCC--C--CCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 013132 140 IFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVS-WTVGLPQ--R--APINKELLVILTPVAFCHALGHVMSNVSFATVA 214 (449)
Q Consensus 140 ~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~-~~~~~~~--~--~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vs 214 (449)
.+++..|.....+|.+...++++.+++.+.+.+. ....... . ...+... ..++..+++-.+..++.++++++.+
T Consensus 203 ~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~g 281 (358)
T PLN00411 203 VSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKG 281 (358)
T ss_pred HHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHH-HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3446778777788756677778888776655322 2211111 0 1112222 2234444544456778899999999
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132 215 VSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (449)
Q Consensus 215 vs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~ 261 (449)
++.+.+...++|+|+++++++++||++++.+++|.+++++|+.++..
T Consensus 282 a~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 282 PLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW 328 (358)
T ss_pred chHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998764
No 46
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.33 E-value=2.6e-05 Score=77.46 Aligned_cols=118 Identities=18% Similarity=0.241 Sum_probs=86.9
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccchHHHH
Q 013132 141 FNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH-ALGHVMSNVSFATVAVSFTH 219 (449)
Q Consensus 141 ~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~~~~sL~~vsvs~a~ 219 (449)
+++..|+..++.+ |...+ ++.+++.+.+.+....... ....+...|...+.+|++. .+++.+.+.++++++++.++
T Consensus 163 ~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as 239 (293)
T PRK10532 163 YILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFG 239 (293)
T ss_pred HHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHH
Confidence 4466777766555 55554 4555555555433332221 1223445555556777664 44677889999999999999
Q ss_pred HHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132 220 TIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (449)
Q Consensus 220 iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~ 261 (449)
++..++|+++++++++++||+++..+++|..++++|++....
T Consensus 240 ~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 240 TLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999988754
No 47
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.26 E-value=3e-05 Score=77.10 Aligned_cols=119 Identities=16% Similarity=0.213 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Q 013132 140 IFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTH 219 (449)
Q Consensus 140 ~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~ 219 (449)
.+++++|+..++.+ |... .....+..+.......+.. ....+.+.|..++..++...+.+.+.+.++++.+++.++
T Consensus 170 ~~~v~~k~~~~~~~-~~~~--~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s 245 (295)
T PRK11689 170 AYCNVTRKYARGKN-GITL--FFILTALALWIKYFLSPQP-AMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLA 245 (295)
T ss_pred HHHHHHhhccCCCC-chhH--HHHHHHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 44567887765544 5433 2222222222222222211 223455666666666666666788999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132 220 TIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (449)
Q Consensus 220 iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~ 262 (449)
++...+|++.++++++++||+++..+++|.+++++|+.+....
T Consensus 246 ~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 246 TASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 9999999999999999999999999999999999999877543
No 48
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.25 E-value=3.9e-05 Score=76.11 Aligned_cols=120 Identities=14% Similarity=0.154 Sum_probs=90.2
Q ss_pred HHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccchHHHH
Q 013132 142 NILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWT-VGLPQRAPINKELLVILTPVAFCH-ALGHVMSNVSFATVAVSFTH 219 (449)
Q Consensus 142 ~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~-~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~~~~sL~~vsvs~a~ 219 (449)
++.+|+.-. +++...+.+++.++.+.+.+... .+.......+.+.|..++..+++. .++..+.+.++++.+++.+.
T Consensus 166 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s 243 (292)
T PRK11272 166 SVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT 243 (292)
T ss_pred HHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 456666533 23456677898888776554332 222111112456777777777764 45678899999999999999
Q ss_pred HHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc
Q 013132 220 TIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE 263 (449)
Q Consensus 220 iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e 263 (449)
++..++|+++++++++++||+++..+++|.++++.|+.+....+
T Consensus 244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998876543
No 49
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.16 E-value=4.2e-05 Score=75.40 Aligned_cols=130 Identities=6% Similarity=-0.039 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhh-chhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132 271 FISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIE-GPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (449)
Q Consensus 271 ~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (449)
+.+.++++++++.+++..|+..++.++. ..+.+..+.+++.|+..... +..+... .. ..+..++..+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~ 70 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRL---------PA-TFWLLLAISA 70 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCc---------ch-hhHHHHHHHH
Confidence 5678899999999999999877664443 35555677777778766421 1111100 00 1111233444
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132 350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN 412 (449)
Q Consensus 350 v~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~ 412 (449)
+....+..+.+..++..++...+......|+++.+++++++||+++. +++|.++.+.|+++..
T Consensus 71 ~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~ 134 (281)
T TIGR03340 71 VANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG 134 (281)
T ss_pred HHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 44455555566688899999999999999999999999999999997 5889999999988764
No 50
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.16 E-value=6.5e-05 Score=63.79 Aligned_cols=63 Identities=16% Similarity=0.267 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132 198 CHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (449)
Q Consensus 198 ~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~ 260 (449)
++.....+...+++.++.+.+..+-++.++++++++++++||++++++++|+.++++|+++..
T Consensus 46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 355567888899999999999999999999999999999999999999999999999998765
No 51
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.07 E-value=0.00019 Score=71.41 Aligned_cols=123 Identities=17% Similarity=0.205 Sum_probs=87.8
Q ss_pred HHHHHHHHHHhhCCch--HHHHHHHHHHHHHHHHH-HHHhCCCC-----CCCCCHHHHHHHHHHHHHHH-HHHHHHHHhh
Q 013132 140 IFNILNKKVYNYFPYP--YFVSVIHLLVGVVYCLV-SWTVGLPQ-----RAPINKELLVILTPVAFCHA-LGHVMSNVSF 210 (449)
Q Consensus 140 ~~~i~nK~~l~~fp~P--~~lt~~r~l~~~l~lli-~~~~~~~~-----~~~~~~~~~~~~l~~gl~~~-~~~~~~~~sL 210 (449)
.++++.|+..++.+.+ .....++.+++.+.+.. ......+. ....+.+.|..++.++++.+ ++..+.+.++
T Consensus 157 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l 236 (299)
T PRK11453 157 CGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLL 236 (299)
T ss_pred HHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446777765554433 33445555555543322 22222111 12345667777788876654 4678888999
Q ss_pred cccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132 211 ATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (449)
Q Consensus 211 ~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~ 262 (449)
++.++..+..+..++|++.++++++++||+++..+++|..++++|+.+...+
T Consensus 237 ~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 237 GRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999887543
No 52
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.93 E-value=0.00011 Score=73.19 Aligned_cols=123 Identities=13% Similarity=0.078 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHH-hCCCCCCC---------CC-HHHHHHHHHHHH-HHHHHH
Q 013132 138 NVIFNILNKKVYN--YFPYPYFVSVIHLLVGVVYCLVSWT-VGLPQRAP---------IN-KELLVILTPVAF-CHALGH 203 (449)
Q Consensus 138 s~~~~i~nK~~l~--~fp~P~~lt~~r~l~~~l~lli~~~-~~~~~~~~---------~~-~~~~~~~l~~gl-~~~~~~ 203 (449)
...++++.|+..+ ..+ |+.++.+++..+.+++++... .+...... .. ...+...+..++ .+...+
T Consensus 157 ~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T TIGR00817 157 FVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQ 235 (302)
T ss_pred HHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Confidence 3445678888877 455 788889999888877765533 22111000 00 001111222222 222233
Q ss_pred HHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132 204 VMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (449)
Q Consensus 204 ~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~ 261 (449)
.+.+.+++++++..+.+....+|+++++++++++||+++..+++|..++++|+.+...
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 5566799999999999999999999999999999999999999999999999988764
No 53
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.85 E-value=0.00081 Score=59.57 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHhh------CCchHHHHHHHHHHHHHHHHHHHH-hCCCCC----C-----CC--CHHHHHHHHHHHH
Q 013132 136 FLNVIFNILNKKVYNY------FPYPYFVSVIHLLVGVVYCLVSWT-VGLPQR----A-----PI--NKELLVILTPVAF 197 (449)
Q Consensus 136 ~~s~~~~i~nK~~l~~------fp~P~~lt~~r~l~~~l~lli~~~-~~~~~~----~-----~~--~~~~~~~~l~~gl 197 (449)
......+++.|+.+++ -..++.+.......+.+.+++.+. .+..+. . +. +.+.+..++..|+
T Consensus 10 ~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
T PF03151_consen 10 LFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGL 89 (153)
T ss_pred HHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHH
Confidence 4455666788888775 224666666666666666654433 222110 0 11 2345566666777
Q ss_pred HHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132 198 CHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (449)
Q Consensus 198 ~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~ 260 (449)
+....+++.+..++++++-+.+++....-+++.+++.++++|+++..++.|+.+.++|+++.+
T Consensus 90 ~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 90 LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 777778889999999999999999999999999999999999999999999999999998754
No 54
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.69 E-value=0.01 Score=60.19 Aligned_cols=225 Identities=13% Similarity=0.039 Sum_probs=134.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH-hhHHHHHHHHHHHHcCccc---C----hhhHHHHHHHHhh
Q 013132 184 INKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQI---P----LSLWLSLAPVVIG 255 (449)
Q Consensus 184 ~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e~~---s----~~~~lsllliv~G 255 (449)
.+.+.+...+..|++..+++.....+++++++|.+.-+. .++-++..++..++++|-. + ....++++++++|
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG 147 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG 147 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence 355677778888999999999999999999999987775 4778999999999998744 2 3467888999999
Q ss_pred hhhhcc----ccc--------ccc-HHHHHHHHHHHHHHHHHHHHHHhhh--------cCCChHHHHH---HHHHHHHHH
Q 013132 256 VSMASL----TEL--------SFN-WTGFISAMISNIAFTYRSIYSKKAM--------TGMDSTNVYA---YTSIIALLF 311 (449)
Q Consensus 256 v~L~~~----~e~--------~f~-~~G~l~~l~s~l~~a~~~V~~kk~~--------~~~~~~~l~~---~~s~~s~l~ 311 (449)
+++.+. .|. ++| ..|++.++++.+.++.++......+ .+.++..... .....+.++
T Consensus 148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~ 227 (345)
T PRK13499 148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAI 227 (345)
T ss_pred HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHH
Confidence 998876 332 123 5799999999999999994332211 1344432221 111233332
Q ss_pred HHHHHHHh---hchhhhhhhHHHHH-hhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHH----HHHhhhhHHHHH
Q 013132 312 CIPPAVLI---EGPQLMQYGFKAAI-AKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTH----AVGNVLKRVFVI 383 (449)
Q Consensus 312 Llp~al~~---e~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~----Si~~~lk~v~~i 383 (449)
.-...... .+..... ..+.- +...+..-.....+.|+..+..+....+.-++.+..+. .+...+.-+++.
T Consensus 228 ~n~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viist 305 (345)
T PRK13499 228 TNLGFCFIRLAKNKDLSL--KADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGN 305 (345)
T ss_pred HHHHHHHHHHhhCCCccc--chhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHH
Confidence 22111111 1111000 00000 00001112222345566666666655555555533322 233355668888
Q ss_pred HHHHHhhCccch--h-----HHHHHHHHHhhhhhh
Q 013132 384 GFSIVVFGNYFT--A-----SFHDLCADIHPEFCS 411 (449)
Q Consensus 384 l~sillfge~ls--~-----~~iGg~lil~Gv~ly 411 (449)
+.|+ +++|.=+ . ..+|.++++.|..+.
T Consensus 306 lwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~li 339 (345)
T PRK13499 306 LWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIV 339 (345)
T ss_pred Hhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHH
Confidence 8888 5998644 1 256778888887654
No 55
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.69 E-value=0.001 Score=57.97 Aligned_cols=119 Identities=12% Similarity=0.012 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHH
Q 013132 269 TGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI 348 (449)
Q Consensus 269 ~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 348 (449)
.|+++.+.+.++.+..+++.|+.+++....+.... .. ........| ...++..++..
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~~-------~~~~~~~~p---------------~~~i~lgl~~~ 58 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-FI-------AALLAFGLA---------------LRAVLLGLAGY 58 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-HH-------HHHHHHhcc---------------HHHHHHHHHHH
Confidence 47899999999999999999998876554332211 00 000000001 00133333444
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHH--hhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 349 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIV--VFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 349 gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sil--lfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
++.++.++ ..+++.+.....-.-.+..+.+.+.++. +|||++|+ +.+|.++++.|+++.++.
T Consensus 59 ~la~~~w~----~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 59 ALSMLCWL----KALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHH----HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 44444443 3677777766654445556666666664 89999998 699999999999998764
No 56
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.68 E-value=0.00034 Score=69.75 Aligned_cols=63 Identities=22% Similarity=0.378 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132 198 CHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (449)
Q Consensus 198 ~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~ 260 (449)
.+..+..+...|+.+.|.+..+-+.+..-++.++++.+++|||++++.+.|..+++.|..+..
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 345667888899999999999999999999999999999999999999999999999997654
No 57
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.68 E-value=0.0022 Score=62.31 Aligned_cols=119 Identities=24% Similarity=0.358 Sum_probs=87.0
Q ss_pred HHHHHHHHHHhhCCchHHHHH-HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHhhcccchHH
Q 013132 140 IFNILNKKVYNYFPYPYFVSV-IHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHA-LGHVMSNVSFATVAVSF 217 (449)
Q Consensus 140 ~~~i~nK~~l~~fp~P~~lt~-~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~-~~~~~~~~sL~~vsvs~ 217 (449)
.+++.+|+.. +.+ +..... ++++........... .... .+.+...+......+++.. .++.+.+.+++..+++.
T Consensus 168 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 243 (292)
T COG0697 168 LYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASL 243 (292)
T ss_pred HHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 4456777766 333 444444 455522222222222 2221 3345677888888888877 47888999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132 218 THTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (449)
Q Consensus 218 a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~ 262 (449)
...+..++|++.+++++++++|+++..+++|..++++|+.+....
T Consensus 244 ~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 244 VALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999887543
No 58
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.66 E-value=0.0016 Score=66.50 Aligned_cols=134 Identities=13% Similarity=0.087 Sum_probs=94.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-hHHHHHHHHHHHHHHHHHHHHHh--hchhhhhhhHHHHHhhhchhHHHH
Q 013132 267 NWTGFISAMISNIAFTYRSIYSKKAMTGMD-STNVYAYTSIIALLFCIPPAVLI--EGPQLMQYGFKAAIAKVGLFKFLS 343 (449)
Q Consensus 267 ~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~-~~~l~~~~s~~s~l~Llp~al~~--e~~~~~~~~~~~~~~~~~~~~~~~ 343 (449)
++.-..+++..-.+....+++.|..++.++ |+.+..+...++.+++.+..... ..+... .+ ...+.
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~---------~~~~~ 115 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK--SL---------KLFLK 115 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--CH---------HHHHH
Confidence 444455555556666677889999999999 99999999999877765554321 111110 00 01222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132 344 DLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS 411 (449)
Q Consensus 344 ~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly 411 (449)
.++..|+++...+...+..++.+++...++.....|+++++++.++++|+++. +..+.++++.|+.+.
T Consensus 116 ~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~ 184 (350)
T PTZ00343 116 NFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALA 184 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhe
Confidence 33445555544444445678899999999999999999999999999999998 577888888887765
No 59
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.48 E-value=0.0019 Score=64.09 Aligned_cols=113 Identities=11% Similarity=0.196 Sum_probs=80.7
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHH---HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchH
Q 013132 141 FNILNKKVYNYFPYPYFVSVIHLL---VGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFA-TVAVS 216 (449)
Q Consensus 141 ~~i~nK~~l~~fp~P~~lt~~r~l---~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~-~vsvs 216 (449)
+.+.+|.. + .+ |+..++.|.. ++.+.+..... +.++ .+.+.....+..|+++.++..++..+.+ +.+++
T Consensus 167 ~~~~~~~~-~-~~-~~~~~~~~~~g~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~ 239 (290)
T TIGR00776 167 YVVVAKAF-G-VD-GLSVLLPQAIGMVIGGIIFNLGHI---LAKP-LKKYAILLNILPGLMWGIGNFFYLFSAQPKVGVA 239 (290)
T ss_pred HHHHHHHc-C-CC-cceehhHHHHHHHHHHHHHHHHHh---cccc-hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchh
Confidence 33566754 2 33 6666544543 33333322221 1122 2233333344488888888888999999 99999
Q ss_pred HHHHHHhhHHHHHHHHHHHHcCcccChhhH----HHHHHHHhhhhhhc
Q 013132 217 FTHTIKALEPFFNAAASQFVLGHQIPLSLW----LSLAPVVIGVSMAS 260 (449)
Q Consensus 217 ~a~iiks~~Pift~lls~l~l~e~~s~~~~----lsllliv~Gv~L~~ 260 (449)
.+.++-+.+|+...+++.+++||+.+++++ +|.+++++|+.+..
T Consensus 240 ~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 240 TSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 99999999998764
No 60
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.41 E-value=0.0058 Score=59.70 Aligned_cols=135 Identities=13% Similarity=0.125 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHH
Q 013132 268 WTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFW 347 (449)
Q Consensus 268 ~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~ 347 (449)
..|+++++.+-+.|++-..|.|-+ ++.++.++..+-.+.+...++........... +.+.. +.+ ..+..+..
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~----~~~~~-~~p--~~~~~~~l 77 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRE----LKQLL-KQP--KTLLMLAL 77 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHH----HHHHH-hCc--HHHHHHHH
Confidence 469999999999999999998875 78999999999988888887766554422221 11111 111 22222233
Q ss_pred HHHHHHHHHHHHH-HHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132 348 IGMFYHLYNQLAT-NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS 411 (449)
Q Consensus 348 ~gv~~~~~~~~~~-~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly 411 (449)
.++. -..|+..| +....-..+..|.+-.++|.+.+++|.++++|+++. |.+..++..+|+..-
T Consensus 78 ~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~ 142 (293)
T COG2962 78 TALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ 142 (293)
T ss_pred HHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 3322 22344333 377777889999999999999999999999999997 788777777787654
No 61
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.35 E-value=0.0015 Score=56.96 Aligned_cols=66 Identities=17% Similarity=0.114 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHH--HcCcccChhhHHHHHHHHhhhhhhccc
Q 013132 197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQF--VLGHQIPLSLWLSLAPVVIGVSMASLT 262 (449)
Q Consensus 197 l~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l--~l~e~~s~~~~lsllliv~Gv~L~~~~ 262 (449)
+++.+..++.+.+++..+++.+..+-+..++++.+.++. ++||++++.+++|+.++++|+.+....
T Consensus 56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 445667888999999999999999999999888888885 899999999999999999999987643
No 62
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.14 E-value=0.01 Score=56.89 Aligned_cols=116 Identities=20% Similarity=0.222 Sum_probs=82.4
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccchHHHH
Q 013132 141 FNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH-ALGHVMSNVSFATVAVSFTH 219 (449)
Q Consensus 141 ~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~~~~sL~~vsvs~a~ 219 (449)
|-+..|.+-+.-|-+ .-...-|+++.++.++.-...-. ..-.+.+....-+.++++. .+.+.+..+++...+...+.
T Consensus 163 YIv~G~r~g~~~~g~-~g~a~gm~vAaviv~Pig~~~ag-~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~ 240 (292)
T COG5006 163 YIVLGQRAGRAEHGT-AGVAVGMLVAALIVLPIGAAQAG-PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG 240 (292)
T ss_pred HHHHcchhcccCCCc-hHHHHHHHHHHHHHhhhhhhhcc-hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence 335566665444423 34445777777776655432211 1112344445555666654 34678899999999999999
Q ss_pred HHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhh
Q 013132 220 TIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSM 258 (449)
Q Consensus 220 iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L 258 (449)
++.+++|.+.++.+.+++||+++..+|+++..++.+.+=
T Consensus 241 ~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 241 TLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred HHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999998887753
No 63
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.08 E-value=0.00012 Score=69.54 Aligned_cols=212 Identities=13% Similarity=0.115 Sum_probs=137.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhh----HHHHHHHHhh
Q 013132 181 RAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSL----WLSLAPVVIG 255 (449)
Q Consensus 181 ~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~----~lsllliv~G 255 (449)
.+.++.+.+..-+.-|++...+....+.|++++++|-+.-+.+ ++-+-+-+++.+.++|-.+..+ .+++++++.|
T Consensus 51 ~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG 130 (288)
T COG4975 51 SPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIG 130 (288)
T ss_pred cCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHh
Confidence 3456777777777888899999999999999999998876654 6678889999999999877543 4678899999
Q ss_pred hhhhcccccc--------ccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHH---HHHHHHHHHHHHHHHHHHhhchhh
Q 013132 256 VSMASLTELS--------FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNV---YAYTSIIALLFCIPPAVLIEGPQL 324 (449)
Q Consensus 256 v~L~~~~e~~--------f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l---~~~~s~~s~l~Llp~al~~e~~~~ 324 (449)
+.+.+..|.+ ..-.|+...+.|.+.|..|.+..+... .|.++. ++..+..+.+.+. ..-+....
T Consensus 131 ~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~g~saiLPqAiGMv~~ali~~---~~~~~~~~ 205 (288)
T COG4975 131 IYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VDGLSAILPQAIGMVIGALILG---FFKMEKRF 205 (288)
T ss_pred heEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc--ccchhhhhHHHHHHHHHHHHHh---hcccccch
Confidence 9999876631 124688888899999999988877653 444443 3333333333221 11111211
Q ss_pred hhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-H----HH
Q 013132 325 MQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-S----FH 399 (449)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~----~i 399 (449)
.++ .+.+. ..|+....-|...+...++.+-.|.=...-+--+++.+-++++++|+=|. + .+
T Consensus 206 ~K~---------t~~ni-----i~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~i 271 (288)
T COG4975 206 NKY---------TWLNI-----IPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVII 271 (288)
T ss_pred HHH---------HHHHH-----hhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhh
Confidence 111 11122 23333333344334444555544432233356778888999999998774 2 45
Q ss_pred HHHHHHhhhhhh
Q 013132 400 DLCADIHPEFCS 411 (449)
Q Consensus 400 Gg~lil~Gv~ly 411 (449)
|.++++.|..+.
T Consensus 272 Giilivvgai~l 283 (288)
T COG4975 272 GIILIVVGAILL 283 (288)
T ss_pred hHHHHHHHhhhh
Confidence 777777776554
No 64
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.00 E-value=0.0054 Score=52.74 Aligned_cols=69 Identities=12% Similarity=0.184 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHhhcccchHHHHHHH-hhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132 193 TPVAFCHALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (449)
Q Consensus 193 l~~gl~~~~~~~~~~~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~ 261 (449)
...-+++....++...++++++++.+..+- ..--+.+++.+.+++||++++.+++++.++++|+++.-.
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 344455666778888999999999998885 577899999999999999999999999999999987743
No 65
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=96.92 E-value=0.023 Score=48.07 Aligned_cols=55 Identities=11% Similarity=0.000 Sum_probs=45.9
Q ss_pred HHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 359 ATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 359 ~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
.+..++..++ ..+....+.|+++.+++.++|+|+++. +.+|.++++.|+.+....
T Consensus 52 ~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 52 FFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS 107 (113)
T ss_pred HHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 3346677775 666777799999999999999999998 588999999999988665
No 66
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.92 E-value=0.01 Score=50.34 Aligned_cols=66 Identities=14% Similarity=0.200 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132 196 AFCHALGHVMSNVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (449)
Q Consensus 196 gl~~~~~~~~~~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~ 261 (449)
-+++.+...+...+++++|++.+..+-+ .--+.+++.+++++||++++.+++++.++++|+++.-.
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3445566677788999999999988865 67888999999999999999999999999999988743
No 67
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.84 E-value=0.022 Score=48.08 Aligned_cols=67 Identities=12% Similarity=0.142 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132 193 TPVAFCHALGHVMSNVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (449)
Q Consensus 193 l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~ 259 (449)
...-+++....++-..+++++|++.+-.+-+ .--+.+++.+++++||++++.+++++.++++|+++.
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 3334455566777778999999999977755 567889999999999999999999999999999865
No 68
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.83 E-value=0.014 Score=48.94 Aligned_cols=66 Identities=15% Similarity=0.126 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132 194 PVAFCHALGHVMSNVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (449)
Q Consensus 194 ~~gl~~~~~~~~~~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~ 259 (449)
..-+++....++-..+++++|++.+..+-+ .--+.+++.+++++||++++.+++++.++++|++..
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 334455666777788999999999987765 668889999999999999999999999999999876
No 69
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.49 E-value=0.0061 Score=60.23 Aligned_cols=63 Identities=19% Similarity=0.283 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132 199 HALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (449)
Q Consensus 199 ~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~ 261 (449)
+..+-.+++.|+.+.|.+..+-+.++.-++.++++..+++|++++...+|..+.++|-.+.+.
T Consensus 74 m~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 74 MIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 445678888999999999999999999999999999999999999999999999999877653
No 70
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.49 E-value=0.022 Score=47.61 Aligned_cols=66 Identities=17% Similarity=0.204 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132 195 VAFCHALGHVMSNVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (449)
Q Consensus 195 ~gl~~~~~~~~~~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~ 260 (449)
.-+++.....+...++++++++.+-.+-+ .--+.+++.+++++||+.+..+++++.++++|++..-
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 33445556677778999999999877754 5578899999999999999999999999999998653
No 71
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.15 E-value=0.13 Score=51.25 Aligned_cols=131 Identities=16% Similarity=0.301 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHh---CCCCC-CC---CCHHHHHHHHHHHHHHHHHH
Q 013132 132 FMWYFLNVIFNILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVSWTV---GLPQR-AP---INKELLVILTPVAFCHALGH 203 (449)
Q Consensus 132 ~~w~~~s~~~~i~nK~~l~~fp-~P~~lt~~r~l~~~l~lli~~~~---~~~~~-~~---~~~~~~~~~l~~gl~~~~~~ 203 (449)
.+..++......+.|+++++.+ .++-......+.+.++..+.... +.... .+ -.++.+..++..++....+.
T Consensus 160 ~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~ 239 (303)
T PF08449_consen 160 LLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQ 239 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3333555566678898887643 35666666666666655433222 21110 00 01234566666667777777
Q ss_pred HHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132 204 VMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (449)
Q Consensus 204 ~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~ 262 (449)
.+.+.-.+..++-...++..+--+++.+++.+++++++++.+|.|+++++.|..+-...
T Consensus 240 ~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~ 298 (303)
T PF08449_consen 240 FFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA 298 (303)
T ss_pred HHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence 66666778888888889999999999999999999999999999999999999876543
No 72
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.01 E-value=0.28 Score=43.22 Aligned_cols=115 Identities=15% Similarity=0.119 Sum_probs=79.9
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH
Q 013132 143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLP-QRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTI 221 (449)
Q Consensus 143 i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~-~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~ii 221 (449)
.+|-.+-+....|+.-+++-+..|.+.+.+.+....+ .........|+.+ ..|++......+...+...++++.+..+
T Consensus 18 ~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~-lGG~lG~~~V~~~~~~vp~lG~~~~~~l 96 (138)
T PF04657_consen 18 AFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAY-LGGLLGVFFVLSNIILVPRLGAALTTIL 96 (138)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHh-ccHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 4555555555558999999999999877655443322 2222222233333 3778877777888889999998887766
Q ss_pred H-hhHHHHHHHHHHH----HcCcccChhhHHHHHHHHhhhhh
Q 013132 222 K-ALEPFFNAAASQF----VLGHQIPLSLWLSLAPVVIGVSM 258 (449)
Q Consensus 222 k-s~~Pift~lls~l----~l~e~~s~~~~lsllliv~Gv~L 258 (449)
. ..+-+..+++..+ .-++++++++++|+.+++.|+.+
T Consensus 97 ~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 97 IVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 4 4567777777775 35678999999999999999864
No 73
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.96 E-value=0.05 Score=44.57 Aligned_cols=55 Identities=16% Similarity=0.291 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhcccchHHHHHHH-hhHHHHHHHHHHHHcCcccChhhHHHHHHH
Q 013132 198 CHALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQIPLSLWLSLAPV 252 (449)
Q Consensus 198 ~~~~~~~~~~~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e~~s~~~~lsllli 252 (449)
++.....+...++++++++.+..+- ....+.+.+.+.+++||++++.+++++.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 5666778888999999999997665 588999999999999999999999998764
No 74
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=95.86 E-value=0.074 Score=45.06 Aligned_cols=52 Identities=12% Similarity=-0.045 Sum_probs=42.9
Q ss_pred HHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132 361 NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN 412 (449)
Q Consensus 361 ~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~ 412 (449)
..+++.+.......-.+.++.+.+.|+++|||++++ +.+|.++++.|+.+..
T Consensus 56 ~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 56 LVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 367777776655555589999999999999999998 6889999999988763
No 75
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.61 E-value=0.38 Score=48.93 Aligned_cols=143 Identities=12% Similarity=0.044 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHH--HHHHHHH-hhchhhhhhhHHHHHhhhchhHHHHH
Q 013132 268 WTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLF--CIPPAVL-IEGPQLMQYGFKAAIAKVGLFKFLSD 344 (449)
Q Consensus 268 ~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~--Llp~al~-~e~~~~~~~~~~~~~~~~~~~~~~~~ 344 (449)
..|+++++++.+|++...+-.||. + .-+++.+ |. ..+.+. +.|+..- ...+. +.+.+.+.+.. .+..
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~~-k-~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~-----f~~~~~~~~~~-~~~~ 75 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKKV-K-KWSWETM-WS-VGGIFSWLILPWLIAALLLPD-----FWAYYSSFSGS-TLLP 75 (345)
T ss_pred HHHHHHHHHHHHHhhccccccccc-C-CCchhHH-HH-HHHHHHHHHHHHHHHHHHhhh-----HHHHHHhcCHH-HHHH
Confidence 579999999999999999888883 3 3344444 43 222211 2222111 11122 22223333332 2223
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCh-hHHHHHhhhhHHHHHHHHHHhhCccc---hh-----HHHHHHHHHhhhhhhhhhh
Q 013132 345 LFWIGMFYHLYNQLATNTLERVAP-LTHAVGNVLKRVFVIGFSIVVFGNYF---TA-----SFHDLCADIHPEFCSNIRF 415 (449)
Q Consensus 345 l~~~gv~~~~~~~~~~~~l~~isp-~t~Si~~~lk~v~~il~sillfge~l---s~-----~~iGg~lil~Gv~ly~~~~ 415 (449)
-+++|++.-.-|...+..+++++- .+..+..-+.-+.+.+++.+++||-- +. ..+|.++++.|+.+..+..
T Consensus 76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 345555554445544555666653 34566666788899999999999644 32 2568889999999998864
Q ss_pred hhhhh
Q 013132 416 SWQAQ 420 (449)
Q Consensus 416 ~~q~~ 420 (449)
.++++
T Consensus 156 ~~k~~ 160 (345)
T PRK13499 156 QLKER 160 (345)
T ss_pred hhccc
Confidence 43333
No 76
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.60 E-value=0.036 Score=47.08 Aligned_cols=70 Identities=20% Similarity=0.340 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH-HhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132 189 LVILTPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (449)
Q Consensus 189 ~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~ii-ks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~ 259 (449)
|+..+|..+ +-.+...++..++..+.|.+.-+ ++++=+||++.++++.+|..+++.++|+.+++.|+.+.
T Consensus 42 ~~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 555566554 34456777788999999999888 58999999999998888888999999999999999875
No 77
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=95.55 E-value=0.15 Score=43.12 Aligned_cols=53 Identities=15% Similarity=0.068 Sum_probs=42.9
Q ss_pred HhhccChh-HHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 362 TLERVAPL-THAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 362 ~l~~isp~-t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
.++++.-. .+++..-+-.+.+.+.|+++|||++++ +.+|.++++.|+...|..
T Consensus 50 al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 50 TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 45555433 357777778889999999999999998 689999999999998653
No 78
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.54 E-value=0.2 Score=43.07 Aligned_cols=53 Identities=13% Similarity=0.199 Sum_probs=42.5
Q ss_pred HhhccCh-hHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 362 TLERVAP-LTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 362 ~l~~isp-~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
.++++.- ..+++..-+--+.+.+.|+++|||++|+ +.+|.++++.|+...|..
T Consensus 50 al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 50 AVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 4555543 3357776678889999999999999998 689999999999988654
No 79
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=95.53 E-value=0.067 Score=51.82 Aligned_cols=70 Identities=19% Similarity=0.212 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132 345 LFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 345 l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
+..-++++..+|...|..++.++|.++.+....|.+++.++++++++.+++. |+++..+..+|+.+.+..
T Consensus 20 ~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~ 90 (244)
T PF04142_consen 20 LAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS 90 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence 4566788889999999999999999999999999999999999999999997 799999999999988765
No 80
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=95.46 E-value=0.43 Score=40.33 Aligned_cols=51 Identities=8% Similarity=0.088 Sum_probs=42.6
Q ss_pred HhhccCh-hHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132 362 TLERVAP-LTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN 412 (449)
Q Consensus 362 ~l~~isp-~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~ 412 (449)
.++++.- +.+++..-+-.+.+.+.++++|||++++ +.+|.++++.|+...|
T Consensus 55 al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 55 AVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4556554 3468888888999999999999999998 6899999999998765
No 81
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.39 E-value=0.53 Score=41.50 Aligned_cols=129 Identities=9% Similarity=0.126 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCC-hHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132 271 FISAMISNIAFTYRSIYSKKAMTGMD-STNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (449)
Q Consensus 271 ~l~~l~s~l~~a~~~V~~kk~~~~~~-~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (449)
+++++++-..-+.+..+..++-+..+ ++.-.......+++.+....++.+.+.... ..+.+|. . ...|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~------~~~~p~w-~----~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLAS------LSSVPWW-A----YLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccch------hccCChH-H----hccH
Confidence 46777888888888888888877765 888888888899888888877665442211 2223331 1 2345
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHhhhh-HHHHHHHHHH-hhC---ccchh-HHHHHHHHHhhhhh
Q 013132 350 MFYHLYNQLATNTLERVAPLTHAVGNVLK-RVFVIGFSIV-VFG---NYFTA-SFHDLCADIHPEFC 410 (449)
Q Consensus 350 v~~~~~~~~~~~~l~~isp~t~Si~~~lk-~v~~il~sil-lfg---e~ls~-~~iGg~lil~Gv~l 410 (449)
++...+-.+....++++++.+.......- -+.+.+++.+ +|+ +++++ ..+|.++++.|+++
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 55544444455678999998876655443 3444556665 343 46776 58899999999864
No 82
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.32 E-value=0.21 Score=41.95 Aligned_cols=52 Identities=13% Similarity=0.052 Sum_probs=43.4
Q ss_pred HhhccCh-hHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhh
Q 013132 362 TLERVAP-LTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNI 413 (449)
Q Consensus 362 ~l~~isp-~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~ 413 (449)
.+++++- +.+++..-+-.+.+.+.|+++|||++++ +.+|.++++.|+...|.
T Consensus 49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 4555544 4478888899999999999999999998 58899999999988753
No 83
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=95.30 E-value=0.27 Score=41.19 Aligned_cols=52 Identities=12% Similarity=0.123 Sum_probs=43.7
Q ss_pred HhhccCh-hHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhh
Q 013132 362 TLERVAP-LTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNI 413 (449)
Q Consensus 362 ~l~~isp-~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~ 413 (449)
.++++.- +.+++..-+-.+.+.+.|+++|||++++ +.+|..+++.|+...|.
T Consensus 50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 4566543 4468888889999999999999999998 69999999999988764
No 84
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=94.98 E-value=0.026 Score=54.54 Aligned_cols=75 Identities=9% Similarity=0.112 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132 185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (449)
Q Consensus 185 ~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~ 259 (449)
..++|.....+|++..++..+-.+++|.=-++-.++.+.+.-+|.++...+++|+.++++.|.|++.++...+.+
T Consensus 249 cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 249 CGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred cccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 556777788999999999999999999877777889999999999999999999999999999988877766554
No 85
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=94.78 E-value=0.6 Score=47.32 Aligned_cols=58 Identities=16% Similarity=0.293 Sum_probs=49.4
Q ss_pred HHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132 205 MSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (449)
Q Consensus 205 ~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~ 262 (449)
+....++..++.+..+-..++.++.++++.+++|+++++.-++|.++++.|.++....
T Consensus 249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 4455677777777777777889999999999999999999999999999999987654
No 86
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=94.55 E-value=1 Score=44.18 Aligned_cols=73 Identities=16% Similarity=0.210 Sum_probs=58.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhH----HHHHHHHhhhhh
Q 013132 185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLW----LSLAPVVIGVSM 258 (449)
Q Consensus 185 ~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~----lsllliv~Gv~L 258 (449)
+++.|+. +..|+++.+++.+...|.+.++++.+-.+..+..+...+.+.+++||+=+++++ +++++++.|.++
T Consensus 192 ~k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 192 EKKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred ccchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 3445554 567788888999999999999999999999999999999999999999886644 556666666543
No 87
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.55 E-value=0.35 Score=45.73 Aligned_cols=65 Identities=14% Similarity=0.121 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhh
Q 013132 194 PVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSM 258 (449)
Q Consensus 194 ~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L 258 (449)
...+..+++..+..+.++|.+.....+..++.++++.+++.++++|+++...++|..++++|+.+
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 34455566667778889999999999999999999999999999999999999999999998764
No 88
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=93.29 E-value=3.4 Score=41.81 Aligned_cols=67 Identities=18% Similarity=0.136 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132 346 FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN 412 (449)
Q Consensus 346 ~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~ 412 (449)
..-++.|..+|...|..+...+|.|+.+...+|...+.++++++++++++. |+...++...|+.+.+
T Consensus 96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 344567788888888899999999999999999999999999999999998 6777888888998887
No 89
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.15 E-value=8.1 Score=34.52 Aligned_cols=117 Identities=17% Similarity=0.158 Sum_probs=70.8
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Q 013132 143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPIN--KELLVILTPVAFCHALGHVMSNVSFATVAVSFTHT 220 (449)
Q Consensus 143 i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~--~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~i 220 (449)
-.|-.+-.....|..-+++.+.+|.+.+.+....+. ++++.. .+..+.....|++.+.....+......+++..+.+
T Consensus 22 ~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~ 100 (150)
T COG3238 22 AINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTIA 100 (150)
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHHH
Confidence 345555455556999999999999887654433322 222221 22122233444555554444555566776666654
Q ss_pred H-HhhHHHHHHHHHHHHc----CcccChhhHHHHHHHHhhhhhhc
Q 013132 221 I-KALEPFFNAAASQFVL----GHQIPLSLWLSLAPVVIGVSMAS 260 (449)
Q Consensus 221 i-ks~~Pift~lls~l~l----~e~~s~~~~lsllliv~Gv~L~~ 260 (449)
+ .+.+-+..++...+=. +++++..++++++++++|+.+..
T Consensus 101 l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 101 LVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 4 4556666666665432 36789999999999999965543
No 90
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.74 E-value=7.1 Score=34.90 Aligned_cols=137 Identities=7% Similarity=0.042 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCC-hHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHH
Q 013132 268 WTGFISAMISNIAFTYRSIYSKKAMTGMD-STNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLF 346 (449)
Q Consensus 268 ~~G~l~~l~s~l~~a~~~V~~kk~~~~~~-~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 346 (449)
+...++++++..+-..++-+..++.+..+ |.--.......+++.++...++.++....+ ...+..|.. +
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a-----~~~~~pwW~-----~ 73 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLA-----AVASAPWWA-----W 73 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-----hccCCchHH-----H
Confidence 45667788888888888888888766655 555555566677777777766554432211 122333322 2
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHH-hhhhHHHHHHHHHH-hhCc---cchh-HHHHHHHHHhhhhhhhhh
Q 013132 347 WIGMFYHLYNQLATNTLERVAPLTHAVG-NVLKRVFVIGFSIV-VFGN---YFTA-SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 347 ~~gv~~~~~~~~~~~~l~~isp~t~Si~-~~lk~v~~il~sil-lfge---~ls~-~~iGg~lil~Gv~ly~~~ 414 (449)
..|++...+-..+.....+.++.+.-+. -.-+-+.+.+++.+ +||. +++. ..+|.++++.|+++.+++
T Consensus 74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 2334443333344456788888776443 33344444555555 3443 4665 488999999997776543
No 91
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=90.09 E-value=0.97 Score=45.44 Aligned_cols=130 Identities=13% Similarity=0.088 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh----CCchHHHHHHHHHHHHHHHH-HHHHhCCCCCC------CCCHHHHHHHHHHHHH
Q 013132 130 FFFMWYFLNVIFNILNKKVYNY----FPYPYFVSVIHLLVGVVYCL-VSWTVGLPQRA------PINKELLVILTPVAFC 198 (449)
Q Consensus 130 ~~~~w~~~s~~~~i~nK~~l~~----fp~P~~lt~~r~l~~~l~ll-i~~~~~~~~~~------~~~~~~~~~~l~~gl~ 198 (449)
+...+......-+++.|.++.. .. ++.+...+--++...++ +.+........ +.+... ...+..+++
T Consensus 167 ~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~sv~ 244 (316)
T KOG1441|consen 167 SAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LILLLNSVL 244 (316)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHHHHHHHH
Confidence 3344445566667888888842 43 55555555455555555 55543322221 222222 223344466
Q ss_pred HHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132 199 HALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL 261 (449)
Q Consensus 199 ~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~ 261 (449)
....+...++.+..+++=++++.....=+++++.++++++++.++...+|..+.+.|+.+...
T Consensus 245 ~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 245 AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 556677888899999999999998888888889999999999999999999999999998764
No 92
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=88.83 E-value=1.1 Score=43.63 Aligned_cols=126 Identities=11% Similarity=0.082 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132 270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (449)
Q Consensus 270 G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (449)
|++.+++|+++++..-+=.||.- ..|++-.+.+++....+.-+...++.+.+.+.. | . ++.|
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p--~----------a-----mlgG 62 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-TGDGFFFQWVMCSGIFLVGLVVNLILGFPPFYP--W----------A-----MLGG 62 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-CCCcHHHHHHHHHHHHHHHHHHHHhcCCCccee--H----------H-----Hhhh
Confidence 67889999999999888888864 457777777766655555554444444443211 0 1 1223
Q ss_pred HHHHHHHHHHHHHhhccC-hhHHHHHhhhhHHHHHHHHHH-hhCcc---ch-h-H-HHHHHHHHhhhhhhhh
Q 013132 350 MFYHLYNQLATNTLERVA-PLTHAVGNVLKRVFVIGFSIV-VFGNY---FT-A-S-FHDLCADIHPEFCSNI 413 (449)
Q Consensus 350 v~~~~~~~~~~~~l~~is-p~t~Si~~~lk~v~~il~sil-lfge~---ls-~-~-~iGg~lil~Gv~ly~~ 413 (449)
.+...-|.+..-+++.++ ++-..+.+..+-+.+-..|-+ +||++ ++ + . .+|.+++++|..++..
T Consensus 63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 332233333333444443 223345555555556555544 67643 33 2 2 6788888889888743
No 93
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=87.97 E-value=4.4 Score=33.00 Aligned_cols=43 Identities=19% Similarity=0.130 Sum_probs=22.5
Q ss_pred HhhccChhH-HHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHH
Q 013132 362 TLERVAPLT-HAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCAD 404 (449)
Q Consensus 362 ~l~~isp~t-~Si~~~lk~v~~il~sillfge~ls~-~~iGg~li 404 (449)
.++++.... +.+..-+-.+.+.+.|+++|||++|+ +.+|.+++
T Consensus 49 al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 49 ALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 556654333 46666678889999999999999998 57776653
No 94
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=85.40 E-value=11 Score=37.61 Aligned_cols=75 Identities=17% Similarity=0.266 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132 185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (449)
Q Consensus 185 ~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~ 259 (449)
.++.++-++..+++.+.+..+-+.-++.-++=..++|..+-=+++.+++.+.++.+++..+|++.+++++|+.+-
T Consensus 237 hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~ 311 (327)
T KOG1581|consen 237 HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE 311 (327)
T ss_pred ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence 456788888999998888777555555444444556666667889999999999999999999999999998754
No 95
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=84.89 E-value=2.1 Score=43.64 Aligned_cols=80 Identities=14% Similarity=0.081 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhhhhhhhhhcCCC
Q 013132 347 WIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIRFSWQAQFLRPS 425 (449)
Q Consensus 347 ~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~~~~q~~~~~~~ 425 (449)
..+...++.|+.....++.++.....+.......++..++.++-+|++|+ ..++..+.+.|+.+.+...++|+....++
T Consensus 164 ~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~ 243 (416)
T KOG2765|consen 164 FFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPAS 243 (416)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCcc
Confidence 33444555666655688888888888999999999999999999999998 48899999999999988888887666666
Q ss_pred c
Q 013132 426 S 426 (449)
Q Consensus 426 ~ 426 (449)
+
T Consensus 244 ~ 244 (416)
T KOG2765|consen 244 R 244 (416)
T ss_pred c
Confidence 4
No 96
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=82.46 E-value=39 Score=34.29 Aligned_cols=144 Identities=15% Similarity=0.094 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHH-HhhchhhhhhhHHHHHhhhchhHHHHHHH
Q 013132 268 WTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAV-LIEGPQLMQYGFKAAIAKVGLFKFLSDLF 346 (449)
Q Consensus 268 ~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al-~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 346 (449)
..|+++..++.++.+.+.+=.||. |+-+-.+.-....+++.+ ++|... +.+-|...+ .+...+...+. ...
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~-----i~~~~~~~~l~-~~~ 77 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWL-IVPWLWALLAIPDFFS-----IYSATPASTLF-WTF 77 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHH-HHHHHHHHHhCCcHHH-----HHHhCChhHHH-HHH
Confidence 579999999999999888877876 344433333334444443 344433 234444322 12222211111 111
Q ss_pred HHHH----HHHHHHHHHHHHhhccC-hhHHHHHhhhhHHHHHHHHHHhhCc---cch---h--HHHHHHHHHhhhhhhhh
Q 013132 347 WIGM----FYHLYNQLATNTLERVA-PLTHAVGNVLKRVFVIGFSIVVFGN---YFT---A--SFHDLCADIHPEFCSNI 413 (449)
Q Consensus 347 ~~gv----~~~~~~~~~~~~l~~is-p~t~Si~~~lk~v~~il~sillfge---~ls---~--~~iGg~lil~Gv~ly~~ 413 (449)
+.|+ ....+.. .+++++ ++..++.--+..++..++--++.|+ -++ . ..+|.++++.|+.+.-+
T Consensus 78 l~G~lWGIGgltfGl----~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~ 153 (344)
T PF06379_consen 78 LFGVLWGIGGLTFGL----AMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK 153 (344)
T ss_pred HHHHHHhcchhhHhH----HHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH
Confidence 1221 1111111 233433 3344444444445555544444331 122 1 36788999999999987
Q ss_pred hhhhhhhhcC
Q 013132 414 RFSWQAQFLR 423 (449)
Q Consensus 414 ~~~~q~~~~~ 423 (449)
....++++..
T Consensus 154 AG~~Ke~~~~ 163 (344)
T PF06379_consen 154 AGSMKEKELG 163 (344)
T ss_pred HHHhhhhhhc
Confidence 7554444433
No 97
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=80.42 E-value=12 Score=37.32 Aligned_cols=115 Identities=17% Similarity=0.088 Sum_probs=64.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHH
Q 013132 267 NWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLF 346 (449)
Q Consensus 267 ~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~ 346 (449)
+..|..++++++++.+....++|+...+.+....-.-... ...+. .+ .++.+++
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~--------~~~l~-~~-----------------~W~~G~~ 58 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGG--------RSYLR-RP-----------------LWWIGLL 58 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchh--------hHHHh-hH-----------------HHHHHHH
Confidence 4689999999999999999999986543221000000000 00000 11 1111111
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132 347 WIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS 411 (449)
Q Consensus 347 ~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly 411 (449)
..++ .-..++.++ ........+-.+.+.-++..+++..+++|+++. ...|.++++.|..+.
T Consensus 59 ~~~~-g~~~~~~Al---~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 59 LMVL-GEILNFVAL---GFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI 120 (300)
T ss_pred HHhc-chHHHHHHH---HhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence 1111 111222222 122222233334466778899999999999998 588999999997665
No 98
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=78.45 E-value=3.2 Score=39.72 Aligned_cols=72 Identities=15% Similarity=0.199 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhh
Q 013132 187 ELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSM 258 (449)
Q Consensus 187 ~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L 258 (449)
..|..+..+++..+.+.++-+.-..+-++=.-.++..+--+||++.+.++++..++.++|++..++..|...
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 356677788888888887777666665555555666677899999999999999999999999999888754
No 99
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=69.82 E-value=2.5 Score=40.81 Aligned_cols=126 Identities=17% Similarity=0.238 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132 270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG 349 (449)
Q Consensus 270 G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 349 (449)
+++.+++=++.|+.......|. +-+|.+...-+++-+.++-+...+ +..|.. .+ ..+... +.+|
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~--GG~p~qQ~lGtT~GALifaiiv~~-~~~p~~---T~---------~~~iv~-~isG 66 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF--GGKPYQQTLGTTLGALIFAIIVFL-FVSPEL---TL---------TIFIVG-FISG 66 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec--CCChhHhhhhccHHHHHHHHHHhe-eecCcc---ch---------hhHHHH-HHhh
Confidence 5677888888998887766664 334544444443333333333322 323321 11 112222 3344
Q ss_pred HHHHHHHHHHHHH-----hhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-H-HHH---HHHHHhhhhhhhhhh
Q 013132 350 MFYHLYNQLATNT-----LERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-S-FHD---LCADIHPEFCSNIRF 415 (449)
Q Consensus 350 v~~~~~~~~~~~~-----l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~-~iG---g~lil~Gv~ly~~~~ 415 (449)
.+...-+..-+.. .++..|+.. -++-+-+.+++++.|+|--++ + .+| .++++.|+++..++.
T Consensus 67 ~~Ws~GQ~~Qfka~~~iGVSkamPiSt----G~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~ 138 (288)
T COG4975 67 AFWSFGQANQFKAIQLIGVSKAMPIST----GMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQD 138 (288)
T ss_pred hHhhhhhhhhhhheeeeeeeccccccc----hhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeec
Confidence 3322222222333 345555544 367888899999999998775 4 444 567788888886653
No 100
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=68.06 E-value=88 Score=30.03 Aligned_cols=121 Identities=12% Similarity=0.065 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHH-hCC--CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013132 138 NVIFNILNKKVYN--YFPYPYFVSVIHLLVGVVYCLVSWT-VGL--PQ--RAPINKELLVILTPVAFCHALGHVMSNVSF 210 (449)
Q Consensus 138 s~~~~i~nK~~l~--~fp~P~~lt~~r~l~~~l~lli~~~-~~~--~~--~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL 210 (449)
+..+.+..|+..+ +|. -....++..+.+...++.+-+ ... +. ...++.+....++.-|++-.+-.+++-|.+
T Consensus 167 saafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcv 245 (309)
T COG5070 167 SAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCV 245 (309)
T ss_pred HHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeE
Confidence 4444444454433 343 233455566666665544332 221 11 223344455667777777766678888899
Q ss_pred cccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132 211 ATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (449)
Q Consensus 211 ~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~ 259 (449)
.-++...+.++.++.-.-.++-+.++++|..+...+.+++++....++.
T Consensus 246 rVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iY 294 (309)
T COG5070 246 RVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY 294 (309)
T ss_pred eehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 8889888999999888888888889999999988888887766544443
No 101
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=66.44 E-value=11 Score=37.16 Aligned_cols=134 Identities=15% Similarity=0.107 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHhh-CCchHHHHHHHHHHHHHHHHHHHHh-CCC----CCCCC-CHHHHHHHHHHHH
Q 013132 126 VTGFFFFMWYFLNVIFN-ILNKKVYNY-FPYPYFVSVIHLLVGVVYCLVSWTV-GLP----QRAPI-NKELLVILTPVAF 197 (449)
Q Consensus 126 ~i~~~~~~w~~~s~~~~-i~nK~~l~~-fp~P~~lt~~r~l~~~l~lli~~~~-~~~----~~~~~-~~~~~~~~l~~gl 197 (449)
.+|..+..|-.+....+ ++.|+.+.. ...-|.++++..+.+.++.++.... |.- .-+.. +.++|..+..-|+
T Consensus 184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl 263 (347)
T KOG1442|consen 184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL 263 (347)
T ss_pred hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH
Confidence 55677777766655444 777766653 2345888888888887776654432 211 11122 3456666666666
Q ss_pred HHHHHHHHHHHhhcccchHHHHHHH-hhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132 198 CHALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (449)
Q Consensus 198 ~~~~~~~~~~~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~ 260 (449)
+.+.-.+.+.+-++ ++.+.++.|. ...-..=.+++..+++|.-+...|-|-+++++|..+.+
T Consensus 264 fgF~mgyvTg~QIK-~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 264 FGFAMGYVTGWQIK-VTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred HHHHhhheeeEEEE-ecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 64433333333333 4444555443 33345556688889999988888888888888877654
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=65.28 E-value=1.4e+02 Score=30.08 Aligned_cols=130 Identities=15% Similarity=0.183 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCC-hH--HHHHHHHHHHHHHHHHHHHHh--hchhhhhhhHHHHHhhhchhHHHHH
Q 013132 270 GFISAMISNIAFTYRSIYSKKAMTGMD-ST--NVYAYTSIIALLFCIPPAVLI--EGPQLMQYGFKAAIAKVGLFKFLSD 344 (449)
Q Consensus 270 G~l~~l~s~l~~a~~~V~~kk~~~~~~-~~--~l~~~~s~~s~l~Llp~al~~--e~~~~~~~~~~~~~~~~~~~~~~~~ 344 (449)
....++.-+++..+..+..|.++..++ |. .+..++++.+.+.+...-..- +.+.+ ++.. ... ++-..
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l---~~~~-~kk----~~P~~ 84 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL---DLRT-AKK----WFPVS 84 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc---ChHH-HHH----HccHH
Confidence 345555666666667777888776554 33 444488888777766554431 22211 1211 111 12222
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhh
Q 013132 345 LFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSN 412 (449)
Q Consensus 345 l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~ 412 (449)
+++.+.. +.....++.+.--.+.+...+.++.+.+....+||..++.. .....+++.|...+.
T Consensus 85 ~lf~~~i-----~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 85 LLFVGML-----FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred HHHHHHH-----HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 3333332 23334678888888888888999999999999999877765 444555555655543
No 103
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=64.69 E-value=73 Score=26.73 Aligned_cols=52 Identities=15% Similarity=0.226 Sum_probs=34.0
Q ss_pred HhhcccchHHHHHHH-hhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132 208 VSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (449)
Q Consensus 208 ~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~ 259 (449)
++.+.-+.+---++. ..+-..-++++.+++||++++....|.+.+++++..+
T Consensus 54 iG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 54 IGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 455544433322232 2233344567888999999999999999998887643
No 104
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=62.68 E-value=1.8e+02 Score=29.57 Aligned_cols=105 Identities=18% Similarity=0.231 Sum_probs=70.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH-hhHHHHHHHHHHHHcCc-------ccChhhHHHHHHHHhhh
Q 013132 185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGH-------QIPLSLWLSLAPVVIGV 256 (449)
Q Consensus 185 ~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e-------~~s~~~~lsllliv~Gv 256 (449)
+.+.+......|++..++....-.+++|+.+|+.+-|. -+.-++-.++-.++.++ +-....++++++.++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 33455666777888777777777899998888876553 34444455554444432 33457889999999999
Q ss_pred hhhccc----c-------cccc-HHHHHHHHHHHHHHHHHHHHHH
Q 013132 257 SMASLT----E-------LSFN-WTGFISAMISNIAFTYRSIYSK 289 (449)
Q Consensus 257 ~L~~~~----e-------~~f~-~~G~l~~l~s~l~~a~~~V~~k 289 (449)
++.... | .+|| ..|.+.+++|-+..+..++-..
T Consensus 149 ai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 149 AICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred HHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 887421 1 1344 3799999999988888876543
No 105
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=59.14 E-value=14 Score=30.96 Aligned_cols=69 Identities=16% Similarity=0.214 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchHHHHHH-HhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132 191 ILTPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS 260 (449)
Q Consensus 191 ~~l~~gl~~~~~~~~~~~sL~~vsvs~a~ii-ks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~ 260 (449)
...|..+ +-.+..++++-++..+.+.+.-+ .+++-+|+++++..+..|....+.++|..+++.|+.+..
T Consensus 55 Y~iPFll-NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 55 YLIPFLL-NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHH-HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 3334433 33445667778888887777554 567788999999866666666889999999999987753
No 106
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.27 E-value=1.1e+02 Score=25.43 Aligned_cols=49 Identities=8% Similarity=0.113 Sum_probs=33.6
Q ss_pred hhccChhHHHH--HhhhhHHHH----HHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132 363 LERVAPLTHAV--GNVLKRVFV----IGFSIVVFGNYFTA-SFHDLCADIHPEFCS 411 (449)
Q Consensus 363 l~~isp~t~Si--~~~lk~v~~----il~sillfge~ls~-~~iGg~lil~Gv~ly 411 (449)
..|+|-..+|+ ...++.+++ ..+|++.++||+.+ ..+|+.+++.|+++.
T Consensus 58 aNRiG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 58 ANRIGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred cchhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 34555554444 345566655 34789999999999 477888887777765
No 107
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=56.88 E-value=13 Score=34.66 Aligned_cols=53 Identities=15% Similarity=0.160 Sum_probs=45.9
Q ss_pred HHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132 360 TNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN 412 (449)
Q Consensus 360 ~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~ 412 (449)
...+++++|...|.....+..++.+++++++||.+.. .++..++.+.|+.+..
T Consensus 71 l~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmia 124 (290)
T KOG4314|consen 71 LLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIA 124 (290)
T ss_pred HHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEE
Confidence 3578999999999999999999999999999999987 5777788888877764
No 108
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.59 E-value=1.2e+02 Score=25.06 Aligned_cols=32 Identities=13% Similarity=0.098 Sum_probs=27.5
Q ss_pred HHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132 228 FNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259 (449)
Q Consensus 228 ft~lls~l~l~e~~s~~~~lsllliv~Gv~L~ 259 (449)
.-+.++.++++|.+.+..+.+.+.+.+|+.++
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 34567889999999999999999999998765
No 109
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=53.93 E-value=15 Score=31.21 Aligned_cols=38 Identities=11% Similarity=0.023 Sum_probs=30.6
Q ss_pred HHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhh
Q 013132 373 VGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFC 410 (449)
Q Consensus 373 i~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~l 410 (449)
+.|.+.-+++++.+.++.+|..+.. .+|+.+++.|+.+
T Consensus 73 i~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 73 IANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 3455777899999988887777875 8899999999865
No 110
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=52.40 E-value=88 Score=30.94 Aligned_cols=53 Identities=11% Similarity=0.075 Sum_probs=41.8
Q ss_pred chHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccc
Q 013132 214 AVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSF 266 (449)
Q Consensus 214 svs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f 266 (449)
++..+.++...--..|.+++++++.+.++..-.-+.++++.|+.+-.+.+.+-
T Consensus 285 GA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk 337 (367)
T KOG1582|consen 285 GALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNK 337 (367)
T ss_pred chhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence 44455555555556688899999999999999999999999999887776543
No 111
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=45.60 E-value=1.6e+02 Score=24.80 Aligned_cols=48 Identities=13% Similarity=0.234 Sum_probs=30.8
Q ss_pred hccChhHHHH--HhhhhHHHH----HHHHHHhhCccchhH-HHHHHHHHhhhhhh
Q 013132 364 ERVAPLTHAV--GNVLKRVFV----IGFSIVVFGNYFTAS-FHDLCADIHPEFCS 411 (449)
Q Consensus 364 ~~isp~t~Si--~~~lk~v~~----il~sillfge~ls~~-~iGg~lil~Gv~ly 411 (449)
.|+|-.++|. ...++.+++ +.++++.++|++++. .+|+++++.++++.
T Consensus 52 NRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 52 NRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3444444433 233444444 568899999999994 77877777777653
No 112
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=43.77 E-value=17 Score=27.75 Aligned_cols=18 Identities=17% Similarity=0.111 Sum_probs=14.1
Q ss_pred HHHHHHHHHhhhhhhhhh
Q 013132 397 SFHDLCADIHPEFCSNIR 414 (449)
Q Consensus 397 ~~iGg~lil~Gv~ly~~~ 414 (449)
..++.|+++.|..+|-..
T Consensus 6 iLi~ICVaii~lIlY~iY 23 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIY 23 (68)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 467889999999988543
No 113
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=40.52 E-value=9.2 Score=37.55 Aligned_cols=45 Identities=11% Similarity=0.172 Sum_probs=0.0
Q ss_pred HHcCccc-ChhhHHHHHHHHhhhhhhccccc--cccHHHHHHHHHHHH
Q 013132 235 FVLGHQI-PLSLWLSLAPVVIGVSMASLTEL--SFNWTGFISAMISNI 279 (449)
Q Consensus 235 l~l~e~~-s~~~~lsllliv~Gv~L~~~~e~--~f~~~G~l~~l~s~l 279 (449)
+++++|+ -+.-.+++++++.-..++..-.. +.-+.|+++.+++++
T Consensus 70 mlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~l 117 (381)
T PF05297_consen 70 MLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCL 117 (381)
T ss_dssp ------------------------------------------------
T ss_pred HHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 3455554 46677788877776665543322 223467655544433
No 114
>PRK10712 PTS system fructose-specific transporter subunits IIBC; Provisional
Probab=38.72 E-value=5.6e+02 Score=28.06 Aligned_cols=59 Identities=20% Similarity=0.271 Sum_probs=36.8
Q ss_pred HHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhh
Q 013132 221 IKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKA 291 (449)
Q Consensus 221 iks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~~a~~~V~~kk~ 291 (449)
+.-+.|++..-.++=+-++ + ++.+.+.|-.++... -.||+-++++.+..+.-..+.||.
T Consensus 278 ~~lmvpvla~yia~sia~r-p------glapg~i~g~~a~~~-----~~GFlG~Ilag~lagyv~~~l~K~ 336 (563)
T PRK10712 278 FALMVPVLAGYIAFSIADR-P------GLTPGLIGGMLAVST-----GSGFIGGIIAGFLAGYVAKLISTK 336 (563)
T ss_pred HHHHHHHHHHHHHHHhcCC-c------cchHHHHHHHHHhcC-----CchHHHHHHHHHHHHHHHHHHHHh
Confidence 3445677777777644333 3 456666666665322 268888888888777665566665
No 115
>PRK02237 hypothetical protein; Provisional
Probab=27.20 E-value=1.1e+02 Score=25.88 Aligned_cols=40 Identities=13% Similarity=0.031 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132 223 ALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (449)
Q Consensus 223 s~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~ 262 (449)
...-+...+..+.+.|++++...++|..+++.|+.+....
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 3445566688899999999999999999999999876543
No 116
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=25.40 E-value=1e+02 Score=25.97 Aligned_cols=40 Identities=15% Similarity=0.128 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132 223 ALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT 262 (449)
Q Consensus 223 s~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~ 262 (449)
...-+...+..+.+.|++++...++|..+++.|+.+....
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3445667788899999999999999999999999877543
No 117
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=23.76 E-value=1.5e+02 Score=25.69 Aligned_cols=38 Identities=24% Similarity=0.460 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHH
Q 013132 124 ALVTGFFFFMWYFLNVIFNILNKKVYNYFP-YPYFVSVI 161 (449)
Q Consensus 124 ~l~i~~~~~~w~~~s~~~~i~nK~~l~~fp-~P~~lt~~ 161 (449)
.+.+.++.++..+.+....++-|..+..++ ||++++-+
T Consensus 55 ~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~Ql 93 (130)
T PF08627_consen 55 NFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQL 93 (130)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHh
Confidence 566777777777778777788888888765 78887755
No 118
>PRK02935 hypothetical protein; Provisional
Probab=20.24 E-value=2.2e+02 Score=23.88 Aligned_cols=16 Identities=13% Similarity=-0.060 Sum_probs=9.4
Q ss_pred HHHHHHHHhhhhhhhh
Q 013132 398 FHDLCADIHPEFCSNI 413 (449)
Q Consensus 398 ~iGg~lil~Gv~ly~~ 413 (449)
.+|.+.++.+..+|-+
T Consensus 45 ~~G~l~~l~S~vvYFw 60 (110)
T PRK02935 45 LLGFLAVIASTVVYFW 60 (110)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4566666666666633
Done!