Your job contains 1 sequence.
>013133
MSYQQPIPNPNHTSLYPQVIDSNPEAPINYKSQSPPSSSQSPPSNLYPSLDMRDLTENLF
PETAATGNTEPSAPPQADEETLIKVPGAILHLIDQSYSVELACSDFKIIRLIQDGNVVAV
LASVGDEVQWPLTKDIAAVKLDDSHYFFSLSFPPQPGSNSDSDLLNYGLTIASKGQEKLL
QELDGILQQYSCFSVQKVSEKVKEIDGEIAKEVTPLEMTGKKREVMEEKSAAYWTTLAPN
VEDYSGTAAKLIAAGSGQLIRGILWCGEVTVDRLKWGNKVLKKRMIPGETSEVSPQTLKR
IKRAKRVTKMTEKVATGVLSGVVKVSGFFTSSVANTKAGKKFFNLLPGEIVLASLDGFNK
VCDAVEVAGKNVMSTSSTVTTQLVSHKYGEKAAEATSEGLDAAGHAIGTAWAAFKIRKAL
NPKSVLKPTTLAKSAAKAASEVKGKKSSK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013133
(449 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006562 - symbol:AT4G35985 species:3702 "Ara... 1165 2.6e-118 1
TAIR|locus:2827800 - symbol:ERD7 "AT2G17840" species:3702... 914 1.0e-91 1
TAIR|locus:2081013 - symbol:AT3G51250 "AT3G51250" species... 866 1.3e-86 1
TAIR|locus:2089940 - symbol:AT3G21600 "AT3G21600" species... 248 6.8e-38 2
TAIR|locus:2089925 - symbol:AT3G21590 "AT3G21590" species... 153 2.5e-10 1
ZFIN|ZDB-GENE-080204-37 - symbol:spg20a "spastic parapleg... 151 1.5e-07 1
UNIPROTKB|A0JNJ3 - symbol:SPG20 "Spartin" species:9913 "B... 122 0.00030 1
RGD|1305900 - symbol:Spg20 "spastic paraplegia 20 (Troyer... 115 0.00077 1
>TAIR|locus:505006562 [details] [associations]
symbol:AT4G35985 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] EMBL:CP002687
InterPro:IPR009686 Pfam:PF06911 IPI:IPI00520849 RefSeq:NP_567995.1
UniGene:At.54622 EnsemblPlants:AT4G35985.1 GeneID:829753
KEGG:ath:AT4G35985 OMA:MTEKVAN ArrayExpress:F4JNX2 Uniprot:F4JNX2
Length = 448
Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
Identities = 233/425 (54%), Positives = 301/425 (70%)
Query: 15 LYPQVIDSNPEAPINYKXXXXXXXXXXXXXNLYPSLDMRDLTENLFPETAATGNTEPSAP 74
LYP V S AP+ NLYPS+++ DL N+FP+ A+ + SAP
Sbjct: 10 LYPTVDTSTTVAPLP---KSSSSSSSTNNNNLYPSINVNDLVNNIFPDPTASDSA--SAP 64
Query: 75 PQADEETLIKVPGAILHLIDQSYSVELACSDFKIIRLIQDGNVVAVLASVGDEVQWPLTK 134
P A EE ++ + GA++HLID+SYSVELAC D +I+RL+Q VAV A VGDE+QWPLTK
Sbjct: 65 PLATEEVILTIHGAMVHLIDKSYSVELACGDLEILRLVQGDITVAVFARVGDEIQWPLTK 124
Query: 135 DIAAVKLDDSHYFFSLSFPPQPGSNSD-------SDLLNYGLTIASKGQEKLLQELDGIL 187
D AVK+D+SHYFFSL P + +SD +++LNYGLT+ASKGQE +L++LD IL
Sbjct: 125 DEPAVKVDESHYFFSLR-PVKESESSDHSVNETENEMLNYGLTMASKGQEPMLEKLDKIL 183
Query: 188 QQYSCFSVQKVSEKVKEIDGEIAKEVTPLEMTGKKREVMEEKSAAYWTTLAPNVEDYSGT 247
YS F+ ++ ++ +D AKE +P E+ GK+++++E++ AYWTTLAPNVEDYSG
Sbjct: 184 ADYSSFTAEEKQKEENVLDLTAAKETSPEELKGKRKKMVEKQCTAYWTTLAPNVEDYSGV 243
Query: 248 AAKLIAAGSGQLIRGILWCGEVTVDRLKWGNKVLKKRMIPGETS-EVSPQTLKRIKRAKR 306
AAKLIAAGSGQLI+GILWCG++T+DRL WGN +KK++ E +VSP TLKR+KR K+
Sbjct: 244 AAKLIAAGSGQLIKGILWCGDLTMDRLMWGNDFMKKKLSKAEKERQVSPGTLKRLKRVKK 303
Query: 307 VTKMTEKVATGVLSGVVKVSGFFTSSVANTKAGKKFFNLLPGEIVLASLDGFNKVCDAVE 366
+TKMTEKVA GVLSGVVKVSGFF+SSV N+KAG+K F LLPGE+VLA+LDGFNKVCDAVE
Sbjct: 304 MTKMTEKVANGVLSGVVKVSGFFSSSVINSKAGQKLFGLLPGEMVLATLDGFNKVCDAVE 363
Query: 367 VAGKNXXXXXXXXXXXXXXHKYGEKAAEATSEGLDXXXXXXXXXXXXFKIRKALNPKSVL 426
VAG++ HKYG K A+AT+EGL FKIR+ALNPKS +
Sbjct: 364 VAGRHVMKTTSDVTTEIVDHKYGAKTAQATNEGLSAAGHAFGTAWTVFKIRQALNPKSAM 423
Query: 427 KPTTL 431
KP++L
Sbjct: 424 KPSSL 428
>TAIR|locus:2827800 [details] [associations]
symbol:ERD7 "AT2G17840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0009409 "response to cold"
evidence=IEP;RCA] [GO:0009644 "response to high light intensity"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0010286 "heat
acclimation" evidence=RCA] GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009651 GO:GO:0009409 GO:GO:0009414
GO:GO:0009644 UniGene:At.19461 UniGene:At.40094 InterPro:IPR009686
Pfam:PF06911 EMBL:AF325067 EMBL:AF428331 EMBL:AY081319
EMBL:BT001230 IPI:IPI00548818 PIR:T00840 RefSeq:NP_179374.1
STRING:O48832 PaxDb:O48832 PRIDE:O48832 EnsemblPlants:AT2G17840.1
GeneID:816293 KEGG:ath:AT2G17840 TAIR:At2g17840 eggNOG:NOG243611
HOGENOM:HOG000239897 InParanoid:O48832 OMA:FWTTIAP PhylomeDB:O48832
ProtClustDB:CLSN2683911 ArrayExpress:O48832 Genevestigator:O48832
Uniprot:O48832
Length = 452
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 179/281 (63%), Positives = 217/281 (77%)
Query: 157 GSNSDSDLLNYGLTIASKGQEKLLQELDGILQQYSCFSVQKVSEKVKE-----IDGEIAK 211
G + +++LNYGLTIASKGQE LL EL+ IL+ YS FSVQ+VSE+ KE +D +A+
Sbjct: 158 GGKNTNEMLNYGLTIASKGQEHLLVELEKILEDYSSFSVQEVSEEAKEAGEKVLDVTVAR 217
Query: 212 EVTPLEMTGKKREVMEEKSAAYWTTLAPNVEDYSGTAAKLIAAGSGQLIRGILWCGEVTV 271
E +P+E+TG+++E++E + +AYWTTLAPNVEDYSG AAKLIA GSG LI+GILWCG+VT+
Sbjct: 218 ETSPVELTGERKEIVERQCSAYWTTLAPNVEDYSGKAAKLIATGSGHLIKGILWCGDVTM 277
Query: 272 DRLKWGNKVLKKRMIPGET-SEVSPQTLKRIKRAKRVTKMTEKVATGVLSGVVKVSGFFT 330
DRL WGN +K+R+ E SEV P TLKRI+R KR+TKMTE VA +LSGV+KVSGFFT
Sbjct: 278 DRLIWGNGFMKRRLSKAEKESEVHPDTLKRIRRVKRMTKMTESVANSILSGVLKVSGFFT 337
Query: 331 SSVANTKAGKKFFNLLPGEIVLASLDGFNKVCDAVEVAGKNXXXXXXXXXXXXXXHKYGE 390
SSVANTK GKKFF+LLPGE++LASLDGFNKVCDAVEVAG+N HKYG
Sbjct: 338 SSVANTKVGKKFFSLLPGEVILASLDGFNKVCDAVEVAGRNVMSTSSTVTTELVDHKYGG 397
Query: 391 KAAEATSEGLDXXXXXXXXXXXXFKIRKALNPKSVLKPTTL 431
KAAEAT+EGLD FKIRKA+NPKSVLKP+TL
Sbjct: 398 KAAEATNEGLDAAGYALGTAWVAFKIRKAINPKSVLKPSTL 438
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 180/328 (54%), Positives = 227/328 (69%)
Query: 13 TSLYPQVIDSNPEAPINYKXXXXXXXXXXXXXNLYPSLDMRDLTENLFPETAATGNTEPS 72
+SLYP V SNPEAPIN NLYPSLDM DL NLFPE T + S
Sbjct: 10 SSLYPTVDTSNPEAPIN-------PSSSSSTNNLYPSLDMNDLARNLFPEQPETSSIPVS 62
Query: 73 APPQADEETLIKVPGAILHLIDQSYSVELACSDFKIIRLIQDGNVVAVLASVGDEVQWPL 132
APP A EE ++K+ GAILHLID+SYSVELAC D +IIR++Q NVVAVLASV DE+QWPL
Sbjct: 63 APPAATEEVILKISGAILHLIDKSYSVELACGDLEIIRIVQGENVVAVLASVSDEIQWPL 122
Query: 133 TKDIAAVKLDDSHYFFSLSFPPQPGSNSDSD------------LLNYGLTIASKGQEKLL 180
TKD +VK+D+SHYFF+L P + S+ SD +LNYGLTIASKGQE LL
Sbjct: 123 TKDENSVKVDESHYFFTLR-PTKEISHDSSDEEDGDGGKNTNEMLNYGLTIASKGQEHLL 181
Query: 181 QELDGILQQYSCFSVQKVSEKVKE-----IDGEIAKEVTPLEMTGKKREVMEEKSAAYWT 235
EL+ IL+ YS FSVQ+VSE+ KE +D +A+E +P+E+TG+++E++E + +AYWT
Sbjct: 182 VELEKILEDYSSFSVQEVSEEAKEAGEKVLDVTVARETSPVELTGERKEIVERQCSAYWT 241
Query: 236 TLAPNVEDYSGTAAKLIAAGSGQLIRGILWCGEVTVDRLKWGNKVLKKRMIPGETSEVSP 295
TLAPNVEDYSG AAKLIA GSG LI+GILWCG+VT+DRL WGN +K+R+ E S
Sbjct: 242 TLAPNVEDYSGKAAKLIATGSGHLIKGILWCGDVTMDRLIWGNGFMKRRLSKAEKE--SE 299
Query: 296 QTLKRIKRAKRVTKMTEKVATGVLSGVV 323
+KR +RV +MT K+ V + ++
Sbjct: 300 VHPDTLKRIRRVKRMT-KMTESVANSIL 326
>TAIR|locus:2081013 [details] [associations]
symbol:AT3G51250 "AT3G51250" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132980
eggNOG:NOG70074 InterPro:IPR009686 Pfam:PF06911
HOGENOM:HOG000239897 EMBL:AY050372 EMBL:AY120694 IPI:IPI00530298
PIR:T45756 RefSeq:NP_190693.1 UniGene:At.869 PaxDb:Q9SD22
PRIDE:Q9SD22 EnsemblPlants:AT3G51250.1 GeneID:824288
KEGG:ath:AT3G51250 TAIR:At3g51250 InParanoid:Q9SD22 OMA:ICDAVEV
PhylomeDB:Q9SD22 ProtClustDB:CLSN2915382 Genevestigator:Q9SD22
Uniprot:Q9SD22
Length = 463
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 171/280 (61%), Positives = 213/280 (76%)
Query: 158 SNSDSDLLNYGLTIASKGQEKLLQELDGILQQYSCFSVQKVSEKVKEIDGEI-----AKE 212
S SD ++LNYGLTIASKGQE +L LD +L+ YSCF+ Q++SEK KE E+ +
Sbjct: 170 SKSDDEILNYGLTIASKGQENVLLVLDQVLRDYSCFTEQRMSEKAKETGEEVLGNSVVAD 229
Query: 213 VTPLEMTGKKREVMEEKSAAYWTTLAPNVEDYSGTAAKLIAAGSGQLIRGILWCGEVTVD 272
+P E+ G++++V+E + AAYWTTLAPNVEDY+ + AK+IA+GSG+LIRGILWCG+VTV+
Sbjct: 230 TSPEELKGERKDVVEGQCAAYWTTLAPNVEDYTHSTAKMIASGSGKLIRGILWCGDVTVE 289
Query: 273 RLKWGNKVLKKRMIPGETS-EVSPQTLKRIKRAKRVTKMTEKVATGVLSGVVKVSGFFTS 331
RLK GN+V+K R+ E +VSP+TL+RIKR KRVT+MTEKVATGVLSGVVKVSGF T
Sbjct: 290 RLKKGNEVMKNRLSRAEKEKDVSPETLRRIKRVKRVTQMTEKVATGVLSGVVKVSGFITG 349
Query: 332 SVANTKAGKKFFNLLPGEIVLASLDGFNKVCDAVEVAGKNXXXXXXXXXXXXXXHKYGEK 391
S+AN+KAGKK F LLPGEIVLASLDGF+K+CDAVEVAGKN H+YG K
Sbjct: 350 SMANSKAGKKLFGLLPGEIVLASLDGFSKICDAVEVAGKNVMSTSSTVTTELVNHRYGTK 409
Query: 392 AAEATSEGLDXXXXXXXXXXXXFKIRKALNPKSVLKPTTL 431
AAEAT+EGLD FKIRKA NPK+V+KP++L
Sbjct: 410 AAEATNEGLDAAGHAFGTAWVAFKIRKAFNPKNVIKPSSL 449
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 111/213 (52%), Positives = 138/213 (64%)
Query: 14 SLYPQVIDSNPEAPINYKXXXXXXXXXXXXXNLYPSLDMRDLTENLFPETAATGNTE-PS 72
++YPQV S P+ P LYPSL +L NLFP+ N + PS
Sbjct: 14 AMYPQVDQSIPDNPF-----ASTNPYVASSPYLYPSLSSHNLGPNLFPDHGDASNDQSPS 68
Query: 73 APPQADEETLIKVPGAILHLIDQSYSVELACSDFKIIRLIQDGNVVAVLASVGDEVQWPL 132
APPQA EE LI+VPGAIL+LID+SYSVELAC DF I+R+IQ N+VAVLA+VG+E+QWPL
Sbjct: 69 APPQATEEVLIRVPGAILNLIDKSYSVELACGDFTIVRIIQGQNIVAVLANVGNEIQWPL 128
Query: 133 TKDIAAVKLDDSHYFFSLSFPPQPG--SNSDSD--------------LLNYGLTIASKGQ 176
TK+ A K+D SHYFFS+ P + G S SDSD +LNYGLTIASKGQ
Sbjct: 129 TKNEVAAKVDGSHYFFSIHPPKEKGQGSGSDSDDEQGQKSKSKSDDEILNYGLTIASKGQ 188
Query: 177 EKLLQELDGILQQYSCFSVQKVSEKVKEIDGEI 209
E +L LD +L+ YSCF+ Q++SEK KE E+
Sbjct: 189 ENVLLVLDQVLRDYSCFTEQRMSEKAKETGEEV 221
>TAIR|locus:2089940 [details] [associations]
symbol:AT3G21600 "AT3G21600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB019232
InterPro:IPR009686 Pfam:PF06911 HOGENOM:HOG000239897
IPI:IPI00535426 RefSeq:NP_188797.1 UniGene:At.38030 PaxDb:Q9LVE6
PRIDE:Q9LVE6 EnsemblPlants:AT3G21600.1 GeneID:821714
KEGG:ath:AT3G21600 TAIR:At3g21600 eggNOG:NOG283512
InParanoid:Q9LVE6 OMA:MCSEAYA PhylomeDB:Q9LVE6
ProtClustDB:CLSN2685247 ArrayExpress:Q9LVE6 Genevestigator:Q9LVE6
Uniprot:Q9LVE6
Length = 374
Score = 248 (92.4 bits), Expect = 6.8e-38, Sum P(2) = 6.8e-38
Identities = 62/204 (30%), Positives = 96/204 (47%)
Query: 234 WTTLAPNVEDYSGTAAKLIAAGSGQLIRGILWCGEVTVDRL-KWGNKVLKKRMIP----- 287
W AP +EDY+ AK IA G+G +IRGI +++ K G+ ++ K
Sbjct: 160 WQEFAPRIEDYNNVVAKAIAGGTGHIIRGIFSLSNAYSNQVHKGGDIMITKAEESQRNGS 219
Query: 288 ---GETS--EVSPQTLKRIKRAKRVTKMTEKVATGVLSGVVKVSGFFTSSVANTKAGKKF 342
G +S E ++R ++++K TE ++ +L+G VSG + +K G F
Sbjct: 220 YNNGNSSGNEKKNGINTHLQRVRKLSKATENLSKTMLNGAGVVSGSVMVPMMKSKPGMAF 279
Query: 343 FNLLPGEIVLASLDGFNKVCDAVEVAGKNXXXXXXXXXXXXXXHKYGEKAAEATSEGLDX 402
F+++PGE++LASLD NK+ DA E A + ++G+ A EAT + L
Sbjct: 280 FSMVPGEVLLASLDALNKILDATEAAERQTLSATSRAATRMVSERFGDNAGEATGDVLAT 339
Query: 403 XXXXXXXXXXXFKIRKALNPKSVL 426
KIRK P S L
Sbjct: 340 AGHAAGTAWNVLKIRKTFYPSSSL 363
Score = 208 (78.3 bits), Expect = 6.8e-38, Sum P(2) = 6.8e-38
Identities = 53/143 (37%), Positives = 81/143 (56%)
Query: 71 PSAPPQA--DEETLIKVPGAILHLIDQSYSVELACSDFKIIRLIQDGNVVAVLASVGDEV 128
PS PQ EE L+++P +HLI +S +VELA DFK++++ +G +A++ +G ++
Sbjct: 25 PSHQPQTMRAEEVLLQIPRCRVHLIGESEAVELASGDFKLVKVSDNGVTLAMIVRIGHDL 84
Query: 129 QWPLTKDIAAVKLDDSHYFFSLSFPPQPGSNSDSDLLNYGLTIASKGQE----KLLQELD 184
QWP+ +D VKLD Y F+L P + D D L+YG+T + ++ L+ LD
Sbjct: 85 QWPVIRDEPVVKLDARDYLFTL--PVK-----DGDPLSYGVTFSGDDRDVALVNSLKLLD 137
Query: 185 GILQQYSCFSVQKVSEKVKE-ID 206
L + SCFS S KV ID
Sbjct: 138 QFLSENSCFS-STASSKVNNGID 159
>TAIR|locus:2089925 [details] [associations]
symbol:AT3G21590 "AT3G21590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR
InterPro:IPR009686 Pfam:PF06911 EMBL:DQ446682 IPI:IPI00539010
RefSeq:NP_188796.2 UniGene:At.53419 EnsemblPlants:AT3G21590.1
GeneID:821713 KEGG:ath:AT3G21590 TAIR:At3g21590 eggNOG:NOG248615
HOGENOM:HOG000124793 InParanoid:Q1PEN5 OMA:DGEIMEN PhylomeDB:Q1PEN5
ProtClustDB:CLSN2920269 Genevestigator:Q1PEN5 Uniprot:Q1PEN5
Length = 198
Score = 153 (58.9 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 242 EDYSGTAAKLIAAGSGQLIRGILWCGEVTVDRL-KWGNKVLKKRMIPGETSEV----SPQ 296
E S T+AK IA G+G +I+GI C ++ + G + G+ S++ + +
Sbjct: 62 EKSSSTSAKAIAVGTGHIIKGIFTCSNSYSKKIHEEGTIAEEDEERSGDISQIDGGGNNE 121
Query: 297 TLKR------IKRAKRVTKMTEKVATGVLSGVVKVSGFFTSSVANTKAGKKFFNLLPGEI 350
T K+ ++RA+++ K++E + L G VS + V +K GK + PGE+
Sbjct: 122 TNKKNKLNKNLQRAEKLWKVSEAIGMAALEGGDLVSSSMIAPVVKSKLGKALLSTAPGEV 181
Query: 351 VLASLDGFNKVCDAV 365
+LASLD F+K D V
Sbjct: 182 ILASLDSFHKHFDVV 196
>ZFIN|ZDB-GENE-080204-37 [details] [associations]
symbol:spg20a "spastic paraplegia 20a (Troyer
syndrome)" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR007330
ZFIN:ZDB-GENE-080204-37 Pfam:PF04212 eggNOG:NOG70074
GeneTree:ENSGT00390000012235 HOGENOM:HOG000015747 OMA:LRLQANW
OrthoDB:EOG4BZN29 InterPro:IPR009686 Pfam:PF06911
HOVERGEN:HBG079206 EMBL:CU571390 EMBL:BC154514 IPI:IPI00864937
RefSeq:NP_001107130.1 UniGene:Dr.101143 Ensembl:ENSDART00000099604
GeneID:100005765 KEGG:dre:100005765 CTD:100005765 NextBio:20786827
Uniprot:A8WFZ3
Length = 567
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 72/282 (25%), Positives = 121/282 (42%)
Query: 130 WPLTKDIAAVKLDDSHYFFSLSFPPQPGSNSDSDLLNYGLTIASKGQEKLLQELDGILQQ 189
+PL D + ++ + F + PGS +L+ L G+ L QE +L Q
Sbjct: 247 YPLYPDFPVLLSNNGVFTFPDTTAAVPGSYVGV-VLSSDLPA---GERDLFQEQLSVLAQ 302
Query: 190 YSCFSVQKVSEKVKEIDGEIAKEVTPLEMTGKKREVMEEKSAAYWTTLAPNVEDYSGTAA 249
V + D +++++ PL + + EEK+A W+ E S +
Sbjct: 303 LRV-QVDEEGGGATGADTNLSEKI-PLS---EASQTPEEKTAPVWS------EKMSQS-- 349
Query: 250 KLIAAGSGQLIRGILWCGEVTVDRLKWGNKVLKKRMIPGET-SEVSPQTLKRIKRAKRVT 308
I AGS L RG++ E T ++ G L+ + P ET +EVSP+ K + AK+ T
Sbjct: 350 --ILAGSSWLGRGLVRGAEATGKAIQRGGTKLRDNITPEETPAEVSPKVTKGLNAAKQAT 407
Query: 309 KMTEKVATGVLSGVVKVSGFFTSSVA-------------NTKAGKKFFNLLPGEIVLA-- 353
KV+ ++ GV V+G +A + K GK + + G ++A
Sbjct: 408 GGAVKVSQFLVDGVAAVAGKVGKELAPHVKKHGCKLIPESLKKGKDGSSKMDGAKLVAGS 467
Query: 354 SLDGFNKVCDAVEVAGKNXXXXXXXXXXXXXXHKYGEKAAEA 395
S+ G + + ++E AGK HKYG++A +A
Sbjct: 468 SIQGLSTLWSSLETAGKTIGKSLSSETVTTVRHKYGDEAGQA 509
>UNIPROTKB|A0JNJ3 [details] [associations]
symbol:SPG20 "Spartin" species:9913 "Bos taurus"
[GO:0060612 "adipose tissue development" evidence=IEA] [GO:0051881
"regulation of mitochondrial membrane potential" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IEA] [GO:0048698
"negative regulation of collateral sprouting in absence of injury"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0034389
"lipid particle organization" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA]
InterPro:IPR007330 GO:GO:0005737 Pfam:PF04212 SMART:SM00745
EMBL:BC126710 IPI:IPI00825687 RefSeq:NP_001071464.1
UniGene:Bt.21619 ProteinModelPortal:A0JNJ3 SMR:A0JNJ3 STRING:A0JNJ3
Ensembl:ENSBTAT00000010577 GeneID:534027 KEGG:bta:534027 CTD:23111
eggNOG:NOG70074 GeneTree:ENSGT00390000012235 HOGENOM:HOG000015747
InParanoid:A0JNJ3 OMA:LRLQANW OrthoDB:EOG4BZN29 NextBio:20876238
ArrayExpress:A0JNJ3 InterPro:IPR009686 Pfam:PF06911 Uniprot:A0JNJ3
Length = 668
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 59/223 (26%), Positives = 94/223 (42%)
Query: 195 VQKVSEKVKEIDGEIAKEVTPLEMTGKKREVMEEKSAAYWTTLAPNVEDYSGTAAKLIAA 254
V++ ++ K+ G ++EV L V EEK A + ++S A I +
Sbjct: 379 VRQKGKRGKKTKGTSSEEVN-LSHIVPCEPVSEEK--------AKELPEWSEKVAHNILS 429
Query: 255 GSGQLIRGILWCGEVTVDRLKWGNKVLKKRMIPGETS-EVSPQTLKRIKRAKRVTKMTEK 313
G+ + G++ E T ++ G L++R+ P E EVSP K + AK+ T K
Sbjct: 430 GASWVSWGLVKGAEFTGKAIQKGASKLRERIQPEEKPVEVSPAVTKGLYMAKQATGGAAK 489
Query: 314 VATGVLSGVVKVSGFFTSSVAN--TKAGKKFF-----------NLLPGEIVLA--SLDGF 358
V+ ++ GV V+ +A K G K + L G +V+A S+ GF
Sbjct: 490 VSQFLVDGVCTVANCVGKELAPHVKKHGSKLVPESLKKDRNGKSTLDGAMVVAASSVQGF 549
Query: 359 NKVCDAVEVAGKNXXXXXXXXXXXXXXHKYGEKAAEATSEGLD 401
+ V +E A K +KYG A EAT +D
Sbjct: 550 STVWQGLECAAKCIVNNVSAETVQTVRYKYGHTAGEATHNAVD 592
>RGD|1305900 [details] [associations]
symbol:Spg20 "spastic paraplegia 20 (Troyer syndrome)"
species:10116 "Rattus norvegicus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005741
"mitochondrial outer membrane" evidence=ISO] [GO:0005811 "lipid
particle" evidence=ISO] [GO:0009838 "abscission" evidence=ISO]
[GO:0030496 "midbody" evidence=ISO] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0034389 "lipid
particle organization" evidence=ISO] [GO:0045202 "synapse"
evidence=ISO] [GO:0048698 "negative regulation of collateral
sprouting in absence of injury" evidence=ISO] [GO:0050905
"neuromuscular process" evidence=ISO] [GO:0051301 "cell division"
evidence=ISO] [GO:0051881 "regulation of mitochondrial membrane
potential" evidence=ISO] [GO:0060612 "adipose tissue development"
evidence=ISO] RGD:1305900 eggNOG:NOG70074 HOGENOM:HOG000015747
InterPro:IPR009686 Pfam:PF06911 EMBL:BC099217 IPI:IPI00372203
UniGene:Rn.7964 STRING:Q4FZR7 PhosphoSite:Q4FZR7 UCSC:RGD:1305900
HOVERGEN:HBG103701 Genevestigator:Q4FZR7 Uniprot:Q4FZR7
Length = 382
Score = 115 (45.5 bits), Expect = 0.00077, P = 0.00077
Identities = 47/178 (26%), Positives = 77/178 (43%)
Query: 240 NVEDYSGTAAKLIAAGSGQLIRGILWCGEVTVDRLKWGNKVLKKRMIPGETS-EVSPQTL 298
++ ++S A I +G+ + G++ E T ++ G L++R+ P E EVSP
Sbjct: 130 DLPEWSEKVAHNILSGASWVSWGLVKGAEFTGKAIQKGASKLRERIQPEEKPVEVSPAVT 189
Query: 299 KRIKRAKRVTKMTEKVATGVLSGVVKVSGFFTSSVAN--TKAGKKFF-----------NL 345
+ + AK+ T KV+ ++ GV V+ +A K G K +
Sbjct: 190 RGLYIAKQATGGAAKVSQFLVDGVCTVANCVGKELAPHVKKHGSKLVPESLKRDKDGKST 249
Query: 346 LPGEIVLA--SLDGFNKVCDAVEVAGKNXXXXXXXXXXXXXXHKYGEKAAEATSEGLD 401
L G +V+A S+ GF+ V +E A K +KYG A EAT +D
Sbjct: 250 LDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETVQTVRYKYGHNAGEATHNAVD 307
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 449 392 0.00095 117 3 11 23 0.46 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 611 (65 KB)
Total size of DFA: 224 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.99u 0.11s 36.10t Elapsed: 00:00:01
Total cpu time: 35.99u 0.11s 36.10t Elapsed: 00:00:01
Start: Mon May 20 22:36:02 2013 End: Mon May 20 22:36:03 2013