BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013140
(449 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HM5|A Chain A, Sant Domain Of Human Dna Methyltransferase 1 Associated
Protein 1
pdb|4IEJ|A Chain A, Crystal Structure Of A Dna Methyltransferase 1 Associated
Protein 1 (dmap1) From Homo Sapiens At 1.45 A Resolution
Length = 93
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 5/90 (5%)
Query: 101 DYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSS- 159
DY FA++NK+V V Y+++EY+ YL D WTK ETD LF+L RFDLRF+VI DR+
Sbjct: 4 DYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQ 63
Query: 160 ---RTVEELKDRYY-VSRAILIARAPSPTD 185
R+VE+LK+RYY + + RA TD
Sbjct: 64 FKKRSVEDLKERYYHICAKLANVRAVPGTD 93
>pdb|2RGH|A Chain A, Structure Of Alpha-Glycerophosphate Oxidase From
Streptococcus Sp.: A Template For The Mitochondrial
Alpha- Glycerophosphate Dehydrogenase
Length = 571
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 117 TDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSR-TVEELKDRYYVSRAI 175
TD +Y+ TDP T+E+ D L + VI R+P + T+ +++ + R +
Sbjct: 313 TDTDYQGDFTDPKVTQEDVDYLLD----------VINHRYPEANITLADIEASWAGLRPL 362
Query: 176 LIARAPSPTDVS-GHPLVKDP 195
LI + SP+ +S G L ++P
Sbjct: 363 LIGNSGSPSTISRGSSLEREP 383
>pdb|2ZZF|A Chain A, Crystal Structure Of Alanyl-Trna Synthetase Without
Oligomerization Domain
pdb|2ZZG|A Chain A, Crystal Structure Of Alanyl-Trna Synthetase In Complex
With 5''-O-(N-(L-Alanyl)-Sulfamyoxyl) Adenine Without
Oligomerization Domain
pdb|2ZZG|B Chain B, Crystal Structure Of Alanyl-Trna Synthetase In Complex
With 5''-O-(N-(L-Alanyl)-Sulfamyoxyl) Adenine Without
Oligomerization Domain
Length = 752
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Query: 65 DEKITWQWLPFTNSARKDNLQLYHWVRVVNGVPP 98
D K+TW+WLP T + +K +LY GV P
Sbjct: 672 DRKVTWEWLPRTTAEQKYGFRLYQ-----GGVVP 700
>pdb|1A52|A Chain A, Estrogen Receptor Alpha Ligand-Binding Domain Complexed To
Estradiol
pdb|1A52|B Chain B, Estrogen Receptor Alpha Ligand-Binding Domain Complexed To
Estradiol
Length = 258
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ ER L ++LS +H
Sbjct: 167 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHERLAQLLLILSHIRHM 221
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 222 SNKGMEHLYSMK 233
>pdb|1A0E|A Chain A, Xylose Isomerase From Thermotoga Neapolitana
pdb|1A0E|D Chain D, Xylose Isomerase From Thermotoga Neapolitana
Length = 443
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 20/90 (22%)
Query: 81 KDNLQL--YHWVRVVN-GVPPTGDYSFAKYNKSVDVVKYTDEEYEKYLTDPM-WTKEETD 136
KD+L+ W VN G P GD + D + +Y TDPM D
Sbjct: 38 KDHLKFSVAFWHTFVNEGRDPFGDPT-------------ADRPWNRY-TDPMDKAFARVD 83
Query: 137 QLFELCERFDLRFIVIADR--FPSSRTVEE 164
LFE CE+ ++ + DR P +T+ E
Sbjct: 84 ALFEFCEKLNIEYFCFHDRDIAPEGKTLRE 113
>pdb|3VSR|A Chain A, Arthrobacter Sp. K-1 Beta-Fructofuranosidase
pdb|3VSS|A Chain A, Arthrobacter Sp. K-1 Beta-Fructofuranosidase Complexed
With Fructose
Length = 496
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 337 GVNLKPKVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAEGSSYRDGS 384
G N+KP P A+ ++ K+ +TL K +A+G+ Y+ G+
Sbjct: 190 GTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGA 237
>pdb|2JFA|B Chain B, Estrogen Receptor Alpha Lbd In Complex With An Affinity-
Selected Corepressor Peptide
pdb|2BJ4|B Chain B, Estrogen Receptor Alpha Lbd In Complex With A
Phage-Display Derived Peptide Antagonist
Length = 252
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 182 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 236
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 237 SNKGMEHLYSMK 248
>pdb|2BJ4|A Chain A, Estrogen Receptor Alpha Lbd In Complex With A
Phage-Display Derived Peptide Antagonist
pdb|2JF9|A Chain A, Estrogen Receptor Alpha Lbd In Complex With A Tamoxifen-
Specific Peptide Antagonist
pdb|2JF9|B Chain B, Estrogen Receptor Alpha Lbd In Complex With A Tamoxifen-
Specific Peptide Antagonist
pdb|2JF9|C Chain C, Estrogen Receptor Alpha Lbd In Complex With A Tamoxifen-
Specific Peptide Antagonist
pdb|2JFA|A Chain A, Estrogen Receptor Alpha Lbd In Complex With An Affinity-
Selected Corepressor Peptide
Length = 252
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 182 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 236
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 237 SNKGMEHLYSMK 248
>pdb|4DMA|A Chain A, Crystal Structure Of Era Lbd In Complex With Ru100132
pdb|4DMA|B Chain B, Crystal Structure Of Era Lbd In Complex With Ru100132
Length = 247
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 161 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 215
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 216 SNKGMEHLYSMK 227
>pdb|3HLV|A Chain A, Crystal Structure Of Human Estrogen Receptor Alpha
Ligand-Bi Domain In Complex With A Glucocorticoid
Receptor Interactin 1 Nr Box Ii Peptide And
16-Alpha-Hydroxy-Estrone ((8s,9r,13
16r)-3,16-Dihydroxy-13-Methyl-7,8,9,11,12,14,15,
16-Octahyd Cyclopenta[a]phenanthren-17-One
pdb|3HLV|B Chain B, Crystal Structure Of Human Estrogen Receptor Alpha
Ligand-Bi Domain In Complex With A Glucocorticoid
Receptor Interactin 1 Nr Box Ii Peptide And
16-Alpha-Hydroxy-Estrone ((8s,9r,13
16r)-3,16-Dihydroxy-13-Methyl-7,8,9,11,12,14,15,
16-Octahyd Cyclopenta[a]phenanthren-17-One
Length = 253
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 166 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 220
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 221 SNKGMEHLYSMK 232
>pdb|1GWQ|A Chain A, Human Oestrogen Receptor Alpha Ligand-Binding Domain In
Complex With Raloxifene Core And Tif2 Nrbox2 Peptide
pdb|1GWQ|B Chain B, Human Oestrogen Receptor Alpha Ligand-Binding Domain In
Complex With Raloxifene Core And Tif2 Nrbox2 Peptide
Length = 248
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 163 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 217
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 218 SNKGMEHLYSMK 229
>pdb|1GWR|A Chain A, Human Oestrogen Receptor Alpha Ligand-Binding Domain In
Complex With 17beta-Oestradiol And Tif2 Nrbox3 Peptide
pdb|1GWR|B Chain B, Human Oestrogen Receptor Alpha Ligand-Binding Domain In
Complex With 17beta-Oestradiol And Tif2 Nrbox3 Peptide
Length = 245
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 159 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 213
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 214 SNKGMEHLYSMK 225
>pdb|1SJ0|A Chain A, Human Estrogen Receptor Alpha Ligand-binding Domain In
Complex With The Antagonist Ligand 4-d
pdb|1XP1|A Chain A, Human Estrogen Receptor Alpha Ligand-binding Domain In
Complex With Compound 15
pdb|1XP6|A Chain A, Human Estrogen Receptor Alpha Ligand-binding Domain In
Complex With Compound 16
pdb|1XP9|A Chain A, Human Estrogen Receptor Alpha Ligand-binding Domain In
Complex With Compound 18
pdb|1XPC|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Compound 19
pdb|1YIM|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Compound 4
pdb|1YIN|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Compound 3f
Length = 248
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 157 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 211
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 212 SNKGMEHLYSMK 223
>pdb|3L03|A Chain A, Crystal Structure Of Human Estrogen Receptor Alpha
Ligand-Binding Domain In Complex With A Glucocorticoid
Receptor Interacting Protein 1 Nr Box Ii Peptide And
Estetrol (Estra-1,3,5(10)-Triene-3,15 Alpha,
16alpha,17beta-Tetrol)
pdb|3L03|B Chain B, Crystal Structure Of Human Estrogen Receptor Alpha
Ligand-Binding Domain In Complex With A Glucocorticoid
Receptor Interacting Protein 1 Nr Box Ii Peptide And
Estetrol (Estra-1,3,5(10)-Triene-3,15 Alpha,
16alpha,17beta-Tetrol)
Length = 253
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 166 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 220
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 221 SNKGMEHLYSMK 232
>pdb|3DT3|A Chain A, Human Estrogen Receptor Alpha Lbd With Gw368
pdb|3DT3|B Chain B, Human Estrogen Receptor Alpha Lbd With Gw368
pdb|2YJA|B Chain B, Stapled Peptides Binding To Estrogen Receptor Alpha
Length = 255
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 167 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 221
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 222 SNKGMEHLYSMK 233
>pdb|1G50|A Chain A, Crystal Structure Of A Wild Type Her Alpha Lbd At 2.9
Angstrom Resolution
pdb|1G50|B Chain B, Crystal Structure Of A Wild Type Her Alpha Lbd At 2.9
Angstrom Resolution
pdb|1G50|C Chain C, Crystal Structure Of A Wild Type Her Alpha Lbd At 2.9
Angstrom Resolution
Length = 247
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 160 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 214
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 215 SNKGMEHLYSMK 226
>pdb|2QA8|B Chain B, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Mutant 537s Complexed With Genistein
pdb|2QZO|A Chain A, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed With Way-169916
Length = 258
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 167 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 221
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 222 SNKGMEHLYSMK 233
>pdb|2QA8|A Chain A, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Mutant 537s Complexed With Genistein
Length = 258
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 167 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 221
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 222 SNKGMEHLYSMK 233
>pdb|1QKU|A Chain A, Wild Type Estrogen Nuclear Receptor Ligand Binding Domain
Complexed With Estradiol
pdb|1QKU|B Chain B, Wild Type Estrogen Nuclear Receptor Ligand Binding Domain
Complexed With Estradiol
pdb|1QKU|C Chain C, Wild Type Estrogen Nuclear Receptor Ligand Binding Domain
Complexed With Estradiol
Length = 250
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 163 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 217
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 218 SNKGMEHLYSMK 229
>pdb|2QZO|B Chain B, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed With Way-169916
Length = 258
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 167 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 221
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 222 SNKGMEHLYSMK 233
>pdb|2IOG|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Compound 11f
Length = 246
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 155 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 209
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 210 SNKGMEHLYSMK 221
>pdb|2P15|A Chain A, Crystal Structure Of The Er Alpha Ligand Binding Domain
With The Agonist Ortho-Trifluoromethylphenylvinyl
Estradiol
pdb|2P15|B Chain B, Crystal Structure Of The Er Alpha Ligand Binding Domain
With The Agonist Ortho-Trifluoromethylphenylvinyl
Estradiol
pdb|2Q6J|A Chain A, Crystal Structure Of Estrogen Receptor Alpha Complexed To
A B-N Substituted Ligand
pdb|2Q6J|B Chain B, Crystal Structure Of Estrogen Receptor Alpha Complexed To
A B-N Substituted Ligand
pdb|2QA6|A Chain A, Crystal Structure Of Estrogen Receptor Alpha Mutant 537s
Complexed With
4-(6-Hydroxy-1h-Indazol-3-Yl)benzene-1,3-Diol
pdb|2QA6|B Chain B, Crystal Structure Of Estrogen Receptor Alpha Mutant 537s
Complexed With
4-(6-Hydroxy-1h-Indazol-3-Yl)benzene-1,3-Diol
pdb|2QAB|A Chain A, Crystal Structure Of Estrogen Receptor Alpha Ligand
Binding Domain Mutant 537s Complexed With An Ethyl
Indazole Compound
pdb|2QAB|B Chain B, Crystal Structure Of Estrogen Receptor Alpha Ligand
Binding Domain Mutant 537s Complexed With An Ethyl
Indazole Compound
pdb|2QGT|A Chain A, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed To An Ether Estradiol Compound
pdb|2QGT|B Chain B, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed To An Ether Estradiol Compound
pdb|2QGW|A Chain A, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed With A Chloro-Indazole Compound
pdb|2QGW|B Chain B, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed With A Chloro-Indazole Compound
pdb|2QH6|A Chain A, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed With An Oxabicyclic
Diarylethylene Compound
pdb|2QH6|B Chain B, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed With An Oxabicyclic
Diarylethylene Compound
pdb|2QR9|A Chain A, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed With An Oxabicyclic Derivative
Compound
pdb|2QR9|B Chain B, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed With An Oxabicyclic Derivative
Compound
pdb|2QSE|A Chain A, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed With Burned Meat Compound
4-Oh-Phip
pdb|2QSE|B Chain B, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed With Burned Meat Compound
4-Oh-Phip
pdb|2QXM|A Chain A, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed To Burned Meat Compound Phip
pdb|2QXM|B Chain B, Crystal Structure Of The Estrogen Receptor Alpha Ligand
Binding Domain Complexed To Burned Meat Compound Phip
Length = 258
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 167 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 221
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 222 SNKGMEHLYSMK 233
>pdb|3OS8|C Chain C, Estrogen Receptor
pdb|3OS8|D Chain D, Estrogen Receptor
pdb|3OS9|A Chain A, Estrogen Receptor
pdb|3OS9|B Chain B, Estrogen Receptor
pdb|3OS9|C Chain C, Estrogen Receptor
pdb|3OS9|D Chain D, Estrogen Receptor
pdb|3OSA|A Chain A, Estrogen Receptor
pdb|3OSA|B Chain B, Estrogen Receptor
pdb|3OSA|C Chain C, Estrogen Receptor
pdb|3OSA|D Chain D, Estrogen Receptor
Length = 258
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 168 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 222
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 223 SNKGMEHLYSMK 234
>pdb|2OCF|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Estradiol And The E2#23 Fn3 Monobody
Length = 298
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 166 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 220
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 221 SNKGMEHLYSMK 232
>pdb|2IOK|A Chain A, Human Estrogen Receptor Alpha Ligand-binding Domain In
Complex With Compound 1d
pdb|2IOK|B Chain B, Human Estrogen Receptor Alpha Ligand-binding Domain In
Complex With Compound 1d
Length = 254
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 163 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 217
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 218 SNKGMEHLYSMK 229
>pdb|3UUC|A Chain A, Crystal Structure Of Hera-Lbd (Wt) In Complex With
Bisphenol-C
pdb|3UUC|B Chain B, Crystal Structure Of Hera-Lbd (Wt) In Complex With
Bisphenol-C
pdb|3UUC|C Chain C, Crystal Structure Of Hera-Lbd (Wt) In Complex With
Bisphenol-C
pdb|3UUC|D Chain D, Crystal Structure Of Hera-Lbd (Wt) In Complex With
Bisphenol-C
Length = 251
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 162 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 216
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 217 SNKGMEHLYSMK 228
>pdb|3UUA|A Chain A, Crystal Structure Of Hera-Lbd (Y537s) In Complex With
Bisphenol-Af
Length = 251
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 162 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 216
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 217 SNKGMEHLYSMK 228
>pdb|2YAT|A Chain A, Crystal Structure Of Estradiol Derived Metal Chelate And
Estrogen Receptor-Ligand Binding Domain Complex
Length = 252
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 164 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 218
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 219 SNKGMEHLYSMK 230
>pdb|2QXS|A Chain A, Crystal Structure Of Antagonizing Mutant 536s Of The
Estrogen Receptor Alpha Ligand Binding Domain Complexed
To Raloxifene
pdb|2QXS|B Chain B, Crystal Structure Of Antagonizing Mutant 536s Of The
Estrogen Receptor Alpha Ligand Binding Domain Complexed
To Raloxifene
Length = 258
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 167 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 221
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 222 SNKGMEHLYSMK 233
>pdb|1X7E|A Chain A, Crystal Structure Of Estrogen Receptor Alpha Complexed
With Way-244
pdb|1X7E|B Chain B, Crystal Structure Of Estrogen Receptor Alpha Complexed
With Way-244
pdb|1X7R|A Chain A, Crystal Structure Of Estrogen Receptor Alpha Complexed
With Genistein
Length = 245
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 159 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 213
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 214 SNKGMEHLYSMK 225
>pdb|3Q95|A Chain A, Crystal Structure Of Human Estrogen Receptor Alpha Lbd In
Complex With Grip Peptide And Estriol
Length = 260
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 169 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 223
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 224 SNKGMEHLYSMK 235
>pdb|3OS8|A Chain A, Estrogen Receptor
pdb|3OS8|B Chain B, Estrogen Receptor
Length = 258
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 168 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 222
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 223 SNKGMEHLYSMK 234
>pdb|3HM1|A Chain A, Crystal Structure Of Human Estrogen Receptor Alpha
Ligand-Bi Domain In Complex With A Glucocorticoid
Receptor Interactin 1 Nr Box Ii Peptide And Estrone
((8r,9s,13s,14s)-3-Hydroxy-
7,8,9,11,12,14,15,
16-Octahydro-6h-Cyclopenta[a]phenanthren-
pdb|3HM1|B Chain B, Crystal Structure Of Human Estrogen Receptor Alpha
Ligand-Bi Domain In Complex With A Glucocorticoid
Receptor Interactin 1 Nr Box Ii Peptide And Estrone
((8r,9s,13s,14s)-3-Hydroxy-
7,8,9,11,12,14,15,
16-Octahydro-6h-Cyclopenta[a]phenanthren-
Length = 253
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 166 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 220
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 221 SNKGMEHLYSMK 232
>pdb|1ERR|A Chain A, Human Estrogen Receptor Ligand-Binding Domain In Complex
With Raloxifene
pdb|1ERR|B Chain B, Human Estrogen Receptor Ligand-Binding Domain In Complex
With Raloxifene
Length = 253
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 163 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 217
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 218 SNKGMEHLYSMK 229
>pdb|1L2I|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With (R,R)-5,11-Cis-Diethyl-5,6,11,12-
Tetrahydrochrysene-2,8-Diol And A Glucocorticoid
Receptor Interacting Protein 1 Nr Box Ii Peptide
pdb|1L2I|B Chain B, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With (R,R)-5,11-Cis-Diethyl-5,6,11,12-
Tetrahydrochrysene-2,8-Diol And A Glucocorticoid
Receptor Interacting Protein 1 Nr Box Ii Peptide
Length = 261
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 170 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 224
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 225 SNKGMEHLYSMK 236
>pdb|3UUA|B Chain B, Crystal Structure Of Hera-Lbd (Y537s) In Complex With
Bisphenol-Af
pdb|3UUD|A Chain A, Crystal Structure Of Hera-Lbd (Y537s) In Complex With
Estradiol
Length = 251
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 162 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 216
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 217 SNKGMEHLYSMK 228
>pdb|3UU7|A Chain A, Crystal Structure Of Hera-Lbd (Y537s) In Complex With
Bisphenol-A
pdb|3UUD|B Chain B, Crystal Structure Of Hera-Lbd (Y537s) In Complex With
Estradiol
Length = 251
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 162 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 216
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 217 SNKGMEHLYSMK 228
>pdb|1ERE|A Chain A, Human Estrogen Receptor Ligand-Binding Domain In Complex
With 17beta-Estradiol
pdb|1ERE|B Chain B, Human Estrogen Receptor Ligand-Binding Domain In Complex
With 17beta-Estradiol
pdb|1ERE|C Chain C, Human Estrogen Receptor Ligand-Binding Domain In Complex
With 17beta-Estradiol
pdb|1ERE|D Chain D, Human Estrogen Receptor Ligand-Binding Domain In Complex
With 17beta-Estradiol
pdb|1ERE|E Chain E, Human Estrogen Receptor Ligand-Binding Domain In Complex
With 17beta-Estradiol
pdb|1ERE|F Chain F, Human Estrogen Receptor Ligand-Binding Domain In Complex
With 17beta-Estradiol
pdb|2OUZ|A Chain A, Crystal Structure Of Estrogen Receptor Alpha-Lasofoxifene
Complex
Length = 253
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 163 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 217
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 218 SNKGMEHLYSMK 229
>pdb|3Q97|A Chain A, Crystal Structure Of Human Estrogen Receptor Alpha Lbd In
Complex With Grip Peptide And Two Isomers Of Ethoxy
Triphenylethylene
Length = 260
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 169 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 223
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 224 SNKGMEHLYSMK 235
>pdb|3Q95|B Chain B, Crystal Structure Of Human Estrogen Receptor Alpha Lbd In
Complex With Grip Peptide And Estriol
pdb|3Q97|B Chain B, Crystal Structure Of Human Estrogen Receptor Alpha Lbd In
Complex With Grip Peptide And Two Isomers Of Ethoxy
Triphenylethylene
Length = 260
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 169 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 223
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 224 SNKGMEHLYSMK 235
>pdb|1PCG|A Chain A, Helix-Stabilized Cyclic Peptides As Selective Inhibitors
Of Steroid Receptor-Coactivator Interactions
pdb|1PCG|B Chain B, Helix-Stabilized Cyclic Peptides As Selective Inhibitors
Of Steroid Receptor-Coactivator Interactions
pdb|2I0J|A Chain A, Benzopyrans Are Selective Estrogen Receptor Beta Agonists
(Serbas) With Novel Activity In Models Of Benign
Prostatic Hyperplasia
pdb|2I0J|B Chain B, Benzopyrans Are Selective Estrogen Receptor Beta Agonists
(Serbas) With Novel Activity In Models Of Benign
Prostatic Hyperplasia
pdb|2I0J|C Chain C, Benzopyrans Are Selective Estrogen Receptor Beta Agonists
(Serbas) With Novel Activity In Models Of Benign
Prostatic Hyperplasia
pdb|2I0J|D Chain D, Benzopyrans Are Selective Estrogen Receptor Beta Agonists
(Serbas) With Novel Activity In Models Of Benign
Prostatic Hyperplasia
Length = 244
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 160 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 214
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 215 SNKGMEHLYSMK 226
>pdb|3ERD|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Diethylstilbestrol And A Glucocorticoid
Receptor Interacting Protein 1 Nr Box Ii Peptide
pdb|3ERD|B Chain B, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Diethylstilbestrol And A Glucocorticoid
Receptor Interacting Protein 1 Nr Box Ii Peptide
pdb|3ERT|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With 4- Hydroxytamoxifen
pdb|1R5K|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Gw5638
pdb|1R5K|B Chain B, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Gw5638
pdb|1R5K|C Chain C, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Gw5638
Length = 261
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 170 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 224
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 225 SNKGMEHLYSMK 236
>pdb|1QKT|A Chain A, Mutant Estrogen Nuclear Receptor Ligand Binding Domain
Complexed With Estradiol
pdb|2AYR|A Chain A, A Serm Designed For The Treatment Of Uterine Leiomyoma
With Unique Tissue Specificity For Uterus And Ovaries In
Rats
pdb|2Q70|A Chain A, Estrogen Receptor Alpha Ligand-Binding Domain Complxed To
A Benzopyran Ligand
pdb|2Q70|B Chain B, Estrogen Receptor Alpha Ligand-Binding Domain Complxed To
A Benzopyran Ligand
pdb|2POG|A Chain A, Benzopyrans As Selective Estrogen Receptor B Agonists
(Serbas). Part 2: Structure Activity Relationship
Studies On The Benzopyran Scaffold.
pdb|2POG|B Chain B, Benzopyrans As Selective Estrogen Receptor B Agonists
(Serbas). Part 2: Structure Activity Relationship
Studies On The Benzopyran Scaffold.
pdb|2QE4|A Chain A, Estrogen Receptor Alpha Ligand-Binding Domain In Complex
With A Benzopyran Agonist
pdb|2QE4|B Chain B, Estrogen Receptor Alpha Ligand-Binding Domain In Complex
With A Benzopyran Agonist
pdb|2R6W|A Chain A, Estrogen Receptor Alpha Ligand-Binding Domain Complexed To
A Serm
pdb|2R6W|B Chain B, Estrogen Receptor Alpha Ligand-Binding Domain Complexed To
A Serm
pdb|2R6Y|A Chain A, Estrogen Receptor Alpha Ligand-Binding Domain In Complex
With A Serm
pdb|2R6Y|B Chain B, Estrogen Receptor Alpha Ligand-Binding Domain In Complex
With A Serm
Length = 248
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 160 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 214
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 215 SNKGMEHLYSMK 226
>pdb|1ZKY|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Obcp-3m And A Glucocorticoid Receptor
Interacting Protein 1 Nr Box Ii Peptide
pdb|1ZKY|B Chain B, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Obcp-3m And A Glucocorticoid Receptor
Interacting Protein 1 Nr Box Ii Peptide
pdb|2B1V|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Obcp-1m And A Glucocorticoid Receptor
Interacting Protein 1 Nr Box Ii Peptide
pdb|2B1V|B Chain B, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Obcp-1m And A Glucocorticoid Receptor
Interacting Protein 1 Nr Box Ii Peptide
pdb|2FAI|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Obcp-2m And A Glucocorticoid Receptor
Interacting Protein 1 Nr Box Ii Peptide
pdb|2FAI|B Chain B, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Obcp-2m And A Glucocorticoid Receptor
Interacting Protein 1 Nr Box Ii Peptide
pdb|2B1Z|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With 17methyl-17alpha-Dihydroequilenin And A
Glucoc Interacting Protein 1 Nr Box Ii Peptide
pdb|2B1Z|B Chain B, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With 17methyl-17alpha-Dihydroequilenin And A
Glucoc Interacting Protein 1 Nr Box Ii Peptide
pdb|2B23|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain And A
Glucocorticoid Receptor-Interacting Protein 1 Nr Box Ii
Peptide
pdb|2B23|B Chain B, Human Estrogen Receptor Alpha Ligand-Binding Domain And A
Glucocorticoid Receptor-Interacting Protein 1 Nr Box Ii
Peptide
pdb|2G44|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Obcp-1m-G And A Glucocorticoid Receptor
Interacting Protein 1 Nr Box Ii Peptide
pdb|2G44|B Chain B, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With Obcp-1m-G And A Glucocorticoid Receptor
Interacting Protein 1 Nr Box Ii Peptide
pdb|2G5O|A Chain A, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With 2- (But-1-Enyl)-17beta-Estradiol And A
Glucocorticoid Receptor Interacting Protein 1 Nr Box Ii
Peptide
pdb|2G5O|B Chain B, Human Estrogen Receptor Alpha Ligand-Binding Domain In
Complex With 2- (But-1-Enyl)-17beta-Estradiol And A
Glucocorticoid Receptor Interacting Protein 1 Nr Box Ii
Peptide
Length = 257
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 166 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 220
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 221 SNKGMEHLYSMK 232
>pdb|3UU7|B Chain B, Crystal Structure Of Hera-Lbd (Y537s) In Complex With
Bisphenol-A
Length = 251
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 162 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 216
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 217 SNKGMEHLYSMK 228
>pdb|1UOM|A Chain A, The Structure Of Estrogen Receptor In Complex With A
Selective And Potent Tetrahydroisochiolin Ligand.
pdb|1XQC|A Chain A, X-Ray Structure Of Eralpha Lbd Bound To A
Tetrahydroisoquinoline Serm Ligand At 2.05a Resolution
pdb|1XQC|B Chain B, X-Ray Structure Of Eralpha Lbd Bound To A
Tetrahydroisoquinoline Serm Ligand At 2.05a Resolution
pdb|1XQC|C Chain C, X-Ray Structure Of Eralpha Lbd Bound To A
Tetrahydroisoquinoline Serm Ligand At 2.05a Resolution
pdb|1XQC|D Chain D, X-Ray Structure Of Eralpha Lbd Bound To A
Tetrahydroisoquinoline Serm Ligand At 2.05a Resolution
Length = 254
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 159 SRTVEELKDRYYVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQ 218
S T++ L+++ ++ R + TD H + K + Q+ +R L ++LS +H
Sbjct: 164 SSTLKSLEEKDHIHRVL-----DKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHM 218
Query: 219 ERKDAEVLAEAK 230
K E L K
Sbjct: 219 SNKGMEHLYSMK 230
>pdb|3HAH|A Chain A, Crystal Structure Of Human Pacsin1 F-Bar Domain (C2
Lattice)
pdb|3HAH|B Chain B, Crystal Structure Of Human Pacsin1 F-Bar Domain (C2
Lattice)
Length = 325
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 106 KYNKSVDVVKYTDEEYEKYLTD-----PMWTKEETDQLFELCERFDLRFIVI 152
K +K V+ T E+YEK L D P + E +Q+FE C++F+ + +V
Sbjct: 194 KVDKCKQDVQKTQEKYEKVLEDVGKTTPQYM-ENMEQVFEQCQQFEEKRLVF 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.129 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,034,413
Number of Sequences: 62578
Number of extensions: 543375
Number of successful extensions: 1001
Number of sequences better than 100.0: 57
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 997
Number of HSP's gapped (non-prelim): 57
length of query: 449
length of database: 14,973,337
effective HSP length: 102
effective length of query: 347
effective length of database: 8,590,381
effective search space: 2980862207
effective search space used: 2980862207
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 53 (25.0 bits)