Query 013140
Match_columns 449
No_of_seqs 155 out of 190
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 04:57:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013140.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013140hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4iej_A DNA methyltransferase 1 100.0 7.4E-42 2.5E-46 287.0 5.0 85 99-183 2-91 (93)
2 3hm5_A DNA methyltransferase 1 100.0 1.2E-38 4.3E-43 268.0 4.8 83 99-181 2-89 (93)
3 1x58_A Hypothetical protein 49 97.3 5.8E-05 2E-09 59.1 1.5 46 128-173 9-57 (62)
4 3osg_A MYB21; transcription-DN 97.0 0.0004 1.4E-08 60.2 3.8 55 121-176 52-111 (126)
5 2cu7_A KIAA1915 protein; nucle 96.8 0.00047 1.6E-08 54.4 2.1 53 125-178 7-60 (72)
6 3sjm_A Telomeric repeat-bindin 96.4 0.001 3.5E-08 51.8 1.9 46 128-173 12-60 (64)
7 2k9n_A MYB24; R2R3 domain, DNA 96.4 0.0014 4.7E-08 55.2 2.8 50 127-177 53-103 (107)
8 1guu_A C-MYB, MYB proto-oncoge 96.4 0.0014 4.8E-08 48.2 2.5 45 126-171 2-48 (52)
9 1gv2_A C-MYB, MYB proto-oncoge 96.4 0.0014 4.7E-08 54.7 2.3 47 127-174 56-103 (105)
10 2din_A Cell division cycle 5-l 96.3 0.0018 6.2E-08 50.1 2.8 51 126-178 8-59 (66)
11 1w0t_A Telomeric repeat bindin 96.3 0.0011 3.8E-08 49.2 1.4 46 128-173 3-51 (53)
12 2ltp_A Nuclear receptor corepr 95.0 0.0011 3.8E-08 54.6 0.0 50 125-175 14-64 (89)
13 1ity_A TRF1; helix-turn-helix, 95.9 0.0027 9.2E-08 49.6 2.0 47 127-173 10-59 (69)
14 2aje_A Telomere repeat-binding 95.9 0.0033 1.1E-07 53.8 2.6 47 127-173 13-64 (105)
15 2llk_A Cyclin-D-binding MYB-li 95.9 0.0018 6E-08 52.0 0.6 42 127-170 23-64 (73)
16 1gvd_A MYB proto-oncogene prot 95.9 0.0041 1.4E-07 45.8 2.6 44 126-170 2-46 (52)
17 1x41_A Transcriptional adaptor 95.9 0.0024 8.2E-08 48.7 1.3 45 125-170 6-51 (60)
18 2ckx_A NGTRF1, telomere bindin 95.8 0.0033 1.1E-07 51.6 2.1 47 129-175 2-53 (83)
19 2elk_A SPCC24B10.08C protein; 95.8 0.003 1E-07 47.9 1.6 45 126-170 8-53 (58)
20 2cqr_A RSGI RUH-043, DNAJ homo 95.7 0.0045 1.6E-07 49.6 2.3 46 126-172 17-67 (73)
21 1h8a_C AMV V-MYB, MYB transfor 95.6 0.0032 1.1E-07 54.5 1.4 52 121-173 69-125 (128)
22 2d9a_A B-MYB, MYB-related prot 95.6 0.0042 1.4E-07 47.0 1.9 45 125-170 6-51 (60)
23 2yum_A ZZZ3 protein, zinc fing 95.6 0.0022 7.4E-08 50.8 0.0 51 126-177 7-64 (75)
24 3zqc_A MYB3; transcription-DNA 95.4 0.01 3.4E-07 51.6 3.7 54 121-175 44-102 (131)
25 2juh_A Telomere binding protei 95.1 0.0048 1.7E-07 54.0 0.8 48 127-174 17-69 (121)
26 2cjj_A Radialis; plant develop 95.1 0.0092 3.1E-07 49.9 2.4 50 127-177 8-62 (93)
27 2yus_A SWI/SNF-related matrix- 95.1 0.0058 2E-07 49.5 1.1 43 127-170 18-60 (79)
28 2roh_A RTBP1, telomere binding 95.1 0.0051 1.8E-07 53.9 0.8 48 127-174 31-83 (122)
29 2dim_A Cell division cycle 5-l 94.7 0.012 4.2E-07 45.8 2.0 45 125-170 7-52 (70)
30 1h89_C C-MYB, MYB proto-oncoge 94.5 0.011 3.7E-07 52.9 1.4 52 121-173 100-156 (159)
31 1wgx_A KIAA1903 protein; MYB D 94.5 0.011 3.8E-07 47.5 1.3 43 127-170 8-54 (73)
32 2eqr_A N-COR1, N-COR, nuclear 94.1 0.014 4.9E-07 44.6 1.2 44 128-172 13-56 (61)
33 2cqq_A RSGI RUH-037, DNAJ homo 93.3 0.02 6.7E-07 45.7 0.7 42 127-170 8-53 (72)
34 3osg_A MYB21; transcription-DN 92.5 0.049 1.7E-06 47.0 2.1 46 126-172 10-56 (126)
35 1gv2_A C-MYB, MYB proto-oncoge 91.8 0.081 2.8E-06 43.9 2.6 46 125-171 2-49 (105)
36 2k9n_A MYB24; R2R3 domain, DNA 90.1 0.093 3.2E-06 43.9 1.4 42 129-171 3-46 (107)
37 4eef_G F-HB80.4, designed hema 89.0 0.085 2.9E-06 42.5 0.3 41 128-169 21-65 (74)
38 1h89_C C-MYB, MYB proto-oncoge 88.7 0.22 7.4E-06 44.3 2.8 43 127-170 58-101 (159)
39 1h8a_C AMV V-MYB, MYB transfor 88.3 0.18 6.1E-06 43.3 1.9 43 127-170 27-70 (128)
40 3zqc_A MYB3; transcription-DNA 87.5 0.29 9.9E-06 42.3 2.7 44 128-172 3-48 (131)
41 1ug2_A 2610100B20RIK gene prod 87.4 0.27 9.2E-06 41.2 2.3 50 129-180 35-88 (95)
42 2lr8_A CAsp8-associated protei 81.4 0.34 1.2E-05 38.6 0.0 40 129-170 16-58 (70)
43 2yqk_A Arginine-glutamic acid 79.1 0.9 3.1E-05 34.8 2.1 48 126-173 8-55 (63)
44 2iw5_B Protein corest, REST co 73.3 0.96 3.3E-05 43.6 0.9 43 127-170 133-175 (235)
45 2crg_A Metastasis associated p 66.5 3.1 0.00011 32.5 2.4 46 128-173 9-54 (70)
46 1ign_A Protein (RAP1); RAP1,ye 64.2 1.8 6E-05 42.0 0.7 47 128-175 9-63 (246)
47 2gm2_A Conserved hypothetical 54.5 6.4 0.00022 34.4 2.5 32 327-359 81-112 (132)
48 4b4c_A Chromodomain-helicase-D 52.9 7.7 0.00026 35.4 2.9 42 128-170 8-53 (211)
49 2fvt_A Conserved hypothetical 51.3 6.4 0.00022 34.6 2.0 32 327-359 84-115 (135)
50 2ab1_A Hypothetical protein; H 50.8 6.7 0.00023 33.8 2.0 32 327-359 79-110 (122)
51 2fi9_A Outer membrane protein; 49.6 7.1 0.00024 33.8 2.0 32 327-359 85-116 (128)
52 3trt_A Vimentin; cytoskeleton, 47.1 30 0.001 26.9 5.1 36 346-381 41-76 (77)
53 2ebi_A DNA binding protein GT- 45.8 7.7 0.00026 30.8 1.5 23 127-149 4-26 (86)
54 4a69_C Nuclear receptor corepr 40.3 14 0.00049 30.4 2.3 45 127-172 43-87 (94)
55 1ofc_X ISWI protein; nuclear p 38.7 25 0.00086 34.9 4.2 59 113-173 91-156 (304)
56 4dzn_A Coiled-coil peptide CC- 37.4 21 0.0007 23.9 2.2 28 355-385 6-33 (33)
57 2yf2_A C4B binding protein; im 33.1 75 0.0026 24.2 5.0 35 328-379 15-52 (65)
58 4d9a_A 2-pyrone-4,6-dicarbaxyl 27.2 73 0.0025 30.4 5.3 63 101-165 40-112 (303)
59 3cpk_A Uncharacterized protein 26.4 22 0.00075 32.0 1.3 32 327-359 105-136 (150)
60 2y9y_A Imitation switch protei 22.4 44 0.0015 34.2 2.8 60 113-173 104-170 (374)
No 1
>4iej_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin regulator, repressor, structural joint center for structural genomics; HET: DNA; 1.45A {Homo sapiens} PDB: 3hm5_A*
Probab=100.00 E-value=7.4e-42 Score=286.96 Aligned_cols=85 Identities=51% Similarity=0.930 Sum_probs=68.6
Q ss_pred CCCCCcccccCCCcccccCHHHHHhhcCCCCCCHHHHHHHHHHhhhcCceeEEEecCCC----CCCCHHHHHHHHH-HHH
Q 013140 99 TGDYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFP----SSRTVEELKDRYY-VSR 173 (449)
Q Consensus 99 ~~~y~FaKfN~~v~ip~ytdeEY~~~L~d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~----~~RtvEDLK~RYY-V~~ 173 (449)
+++|+|||||++|+||+||+|||++||++++||+|||||||+||++|||||+||+|||+ ..|||||||+||| ||+
T Consensus 2 ~~~y~FakfN~~v~ip~yt~eEY~~~L~~~~WT~eETd~LfdLc~~fdlRw~vI~DRy~~~~~~~RtvEdLK~RYY~V~~ 81 (93)
T 4iej_A 2 GKDYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICA 81 (93)
T ss_dssp ------------CCCCCCCHHHHHHHTCBTTBCHHHHHHHHHHHHHTTTCHHHHHHHCCTTTSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCccccCCcCCCcccCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCeEEEeeccccCCCCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999997 3799999999999 999
Q ss_pred HHHHHcCCCC
Q 013140 174 AILIARAPSP 183 (449)
Q Consensus 174 kl~~~R~~~~ 183 (449)
+|+++|+++.
T Consensus 82 ~l~~~r~~~~ 91 (93)
T 4iej_A 82 KLANVRAVPG 91 (93)
T ss_dssp HHHHHTC---
T ss_pred HHHHhhCCCC
Confidence 9999998754
No 2
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=268.00 Aligned_cols=83 Identities=52% Similarity=0.957 Sum_probs=67.3
Q ss_pred CCCCCcccccCCCcccccCHHHHHhhcCCCCCCHHHHHHHHHHhhhcCceeEEEecCCC----CCCCHHHHHHHHH-HHH
Q 013140 99 TGDYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFP----SSRTVEELKDRYY-VSR 173 (449)
Q Consensus 99 ~~~y~FaKfN~~v~ip~ytdeEY~~~L~d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~----~~RtvEDLK~RYY-V~~ 173 (449)
+++|+|||||++++||+||+|||+.||++++||+|||||||+||++|||||+||+|||+ ..|||||||+||| ||+
T Consensus 2 ~~~y~fakfN~~~~i~~yt~eeY~~~L~~~~WTkEETd~Lf~L~~~fdlRW~vI~DRy~~~~~~~Rt~EdLK~RyY~v~~ 81 (93)
T 3hm5_A 2 GKDYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICA 81 (93)
T ss_dssp -------------CCCCCCHHHHHHHTCBTTBCHHHHHHHHHHHHHTTTCHHHHHHHSCTTTSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCchhccccCCCCccCHHHHHHHcCCCCCCHHHHHHHHHHHHHhCCCeeeehhhhccCCCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999996 4799999999999 999
Q ss_pred HHHHHcCC
Q 013140 174 AILIARAP 181 (449)
Q Consensus 174 kl~~~R~~ 181 (449)
+|+.+|+.
T Consensus 82 ~l~~~r~~ 89 (93)
T 3hm5_A 82 KLANVRAV 89 (93)
T ss_dssp HHHHHTC-
T ss_pred HHHHhcCC
Confidence 99999964
No 3
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=97.33 E-value=5.8e-05 Score=59.11 Aligned_cols=46 Identities=26% Similarity=0.367 Sum_probs=41.8
Q ss_pred CCCCHHHHHHHHHHhhhcCceeEEEecCCC--CCCCHHHHHHHHH-HHH
Q 013140 128 PMWTKEETDQLFELCERFDLRFIVIADRFP--SSRTVEELKDRYY-VSR 173 (449)
Q Consensus 128 ~~WT~eETdyLfdLc~~fDLRw~VI~DRy~--~~RtvEDLK~RYY-V~~ 173 (449)
..||.||+.+|++++++|+-.|--|..-|. ..||-=|||+||+ +.+
T Consensus 9 ~~WT~EE~~~L~~gV~k~G~~W~~I~~~y~f~~~RT~VdLKdk~r~L~k 57 (62)
T 1x58_A 9 KDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDLAHKYHRLIS 57 (62)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCHHHHHHHSCCCTTCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHhHhHHHHHHhCCCccCcccchHHHHHHHHHh
Confidence 469999999999999999999999998665 5899999999999 765
No 4
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=97.02 E-value=0.0004 Score=60.23 Aligned_cols=55 Identities=29% Similarity=0.567 Sum_probs=47.1
Q ss_pred HHhhcC----CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH-HHHHHH
Q 013140 121 YEKYLT----DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY-VSRAIL 176 (449)
Q Consensus 121 Y~~~L~----d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY-V~~kl~ 176 (449)
|..+|. ...||.||...|++++.+|+-+|-.|+..++ .||-.++|.||+ +.+++-
T Consensus 52 w~~~l~p~~~~~~WT~eEd~~L~~~v~~~G~~W~~Ia~~l~-gRt~~~~k~rw~~l~~k~~ 111 (126)
T 3osg_A 52 WKNYLAPSISHTPWTAEEDALLVQKIQEYGRQWAIIAKFFP-GRTDIHIKNRWVTISNKLG 111 (126)
T ss_dssp HHHHTSTTSCCSCCCHHHHHHHHHHHHHHCSCHHHHHTTST-TCCHHHHHHHHHHHHHHTT
T ss_pred HhhhcccccccccCCHHHHHHHHHHHHHHCcCHHHHHHHcC-CCCHHHHHHHHHHHHHhcC
Confidence 555553 3479999999999999999999999998764 799999999999 988764
No 5
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=96.79 E-value=0.00047 Score=54.42 Aligned_cols=53 Identities=23% Similarity=0.217 Sum_probs=45.9
Q ss_pred cCCCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH-HHHHHHHH
Q 013140 125 LTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY-VSRAILIA 178 (449)
Q Consensus 125 L~d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY-V~~kl~~~ 178 (449)
+....||.||-..|+++++.|+-+|-.|+..+ ..||-.++|.||+ ..++.+..
T Consensus 7 ~~~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~-~~Rt~~q~k~r~~~~l~~~~~~ 60 (72)
T 2cu7_A 7 GYSVKWTIEEKELFEQGLAKFGRRWTKISKLI-GSRTVLQVKSYARQYFKNKVKC 60 (72)
T ss_dssp SCCCCCCHHHHHHHHHHHHHTCSCHHHHHHHH-SSSCHHHHHHHHHHHHHHHSCS
T ss_pred cCCCCCCHHHHHHHHHHHHHHCcCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHhc
Confidence 34567999999999999999999999999865 4699999999999 87777643
No 6
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=96.44 E-value=0.001 Score=51.79 Aligned_cols=46 Identities=26% Similarity=0.524 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHHHHhhhcCc-eeEEEecCCC-CCCCHHHHHHHHH-HHH
Q 013140 128 PMWTKEETDQLFELCERFDL-RFIVIADRFP-SSRTVEELKDRYY-VSR 173 (449)
Q Consensus 128 ~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~-~~RtvEDLK~RYY-V~~ 173 (449)
..||.||.+.|.+++++|+- .|-.|+.-|+ ..||--++++||. +.+
T Consensus 12 ~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~nl~k 60 (64)
T 3sjm_A 12 QKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKR 60 (64)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHHHHHHHhc
Confidence 46999999999999999995 8999998876 5799999999998 654
No 7
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=96.44 E-value=0.0014 Score=55.25 Aligned_cols=50 Identities=16% Similarity=0.318 Sum_probs=45.0
Q ss_pred CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH-HHHHHHH
Q 013140 127 DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY-VSRAILI 177 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY-V~~kl~~ 177 (449)
...||.||-..|++++..|+-+|-.|+..+ +.||-.++|.||+ +.+++..
T Consensus 53 ~~~WT~eEd~~L~~~~~~~G~~W~~Ia~~l-~gRt~~~~k~rw~~l~r~~~~ 103 (107)
T 2k9n_A 53 TDPWSPEEDMLLDQKYAEYGPKWNKISKFL-KNRSDNNIRNRWMMIARHRAK 103 (107)
T ss_dssp TCCCCHHHHHHHHHHHHHTCSCHHHHHHHH-SSSCHHHHHHHHHHHHHHHHS
T ss_pred ccccCHHHHHHHHHHHHHhCcCHHHHHHHC-CCCCHHHHHHHHHHHHhhHHH
Confidence 457999999999999999999999999765 5799999999999 9888764
No 8
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=96.43 E-value=0.0014 Score=48.23 Aligned_cols=45 Identities=33% Similarity=0.536 Sum_probs=40.6
Q ss_pred CCCCCCHHHHHHHHHHhhhcCc-eeEEEecCCCCCCCHHHHHHHHH-H
Q 013140 126 TDPMWTKEETDQLFELCERFDL-RFIVIADRFPSSRTVEELKDRYY-V 171 (449)
Q Consensus 126 ~d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~~RtvEDLK~RYY-V 171 (449)
....||.||-..|.+++..|+- +|-.|+..++ .||-.+.++||+ +
T Consensus 2 ~~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~-~Rt~~qcr~Rw~~~ 48 (52)
T 1guu_A 2 GKTRWTREEDEKLKKLVEQNGTDDWKVIANYLP-NRTDVQCQHRWQKV 48 (52)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTST-TCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 4567999999999999999998 9999998875 699999999998 5
No 9
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=96.36 E-value=0.0014 Score=54.70 Aligned_cols=47 Identities=26% Similarity=0.474 Sum_probs=41.5
Q ss_pred CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH-HHHH
Q 013140 127 DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY-VSRA 174 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY-V~~k 174 (449)
...||.||-..|++++..|+-+|-.|+..+ +.||-.++|.||+ +.++
T Consensus 56 ~~~Wt~eEd~~L~~~~~~~G~~W~~Ia~~l-~gRt~~~~k~rw~~~~~~ 103 (105)
T 1gv2_A 56 KTSWTEEEDRIIYQAHKRLGNRWAEIAKLL-PGRTDNAIKNHWNSTMRR 103 (105)
T ss_dssp CCCCCHHHHHHHHHHHHHHSSCHHHHHTTC-TTCCHHHHHHHHHHHTC-
T ss_pred ccCCCHHHHHHHHHHHHHhCCCHHHHHHHc-CCCCHHHHHHHHHHHHhc
Confidence 467999999999999999999999999766 4699999999999 6543
No 10
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.34 E-value=0.0018 Score=50.06 Aligned_cols=51 Identities=20% Similarity=0.350 Sum_probs=44.6
Q ss_pred CCCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH-HHHHHHHH
Q 013140 126 TDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY-VSRAILIA 178 (449)
Q Consensus 126 ~d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY-V~~kl~~~ 178 (449)
....||.||-..|+++.+.|+-+|-.|+. +.. ||-.+.++||+ ..+..+..
T Consensus 8 ~k~~WT~eED~~L~~~~~~~g~~W~~Ia~-~~g-Rt~~qcr~Rw~~~l~~~~~~ 59 (66)
T 2din_A 8 KKTEWSREEEEKLLHLAKLMPTQWRTIAP-IIG-RTAAQCLEHYEFLLDKAAQR 59 (66)
T ss_dssp SCCCCCHHHHHHHHHHHHHCTTCHHHHHH-HHS-SCHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCHHHHhc-ccC-cCHHHHHHHHHHHhChHhcC
Confidence 34579999999999999999999999999 764 99999999999 77766643
No 11
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=96.32 E-value=0.0011 Score=49.16 Aligned_cols=46 Identities=24% Similarity=0.342 Sum_probs=41.4
Q ss_pred CCCCHHHHHHHHHHhhhcCc-eeEEEecCCCC-CCCHHHHHHHHH-HHH
Q 013140 128 PMWTKEETDQLFELCERFDL-RFIVIADRFPS-SRTVEELKDRYY-VSR 173 (449)
Q Consensus 128 ~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~-~RtvEDLK~RYY-V~~ 173 (449)
..||.||...|.+++..|+. +|-.|+..++. .||--++++||. +.+
T Consensus 3 ~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 3 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKK 51 (53)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHCcCCHHHHHHHcCCCCCCHHHHHHHHHHHHc
Confidence 46999999999999999995 99999998874 699999999999 764
No 12
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=94.99 E-value=0.0011 Score=54.60 Aligned_cols=50 Identities=24% Similarity=0.237 Sum_probs=44.0
Q ss_pred cCCCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH-HHHHH
Q 013140 125 LTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY-VSRAI 175 (449)
Q Consensus 125 L~d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY-V~~kl 175 (449)
+....||.||-..|+++...|+-+|-.|+..++ .||..++|.||| ..+++
T Consensus 14 ~~~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l~-gRt~~q~k~r~~~~lrk~ 64 (89)
T 2ltp_A 14 LYFQGWTEEEMGTAKKGLLEHGRNWSAIARMVG-SKTVSQCKNFYFNYKKRQ 64 (89)
Confidence 345679999999999999999999999998764 799999999999 76654
No 13
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=95.94 E-value=0.0027 Score=49.57 Aligned_cols=47 Identities=23% Similarity=0.333 Sum_probs=41.9
Q ss_pred CCCCCHHHHHHHHHHhhhcCc-eeEEEecCCCC-CCCHHHHHHHHH-HHH
Q 013140 127 DPMWTKEETDQLFELCERFDL-RFIVIADRFPS-SRTVEELKDRYY-VSR 173 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~-~RtvEDLK~RYY-V~~ 173 (449)
-..||.||...|.+++..|+. +|-.|+..++. .||--++++||. +.+
T Consensus 10 r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l~ 59 (69)
T 1ity_A 10 RQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKK 59 (69)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCCSSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCcCCCCHHHHHHHHHHHcC
Confidence 357999999999999999995 99999998864 799999999999 654
No 14
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=95.93 E-value=0.0033 Score=53.76 Aligned_cols=47 Identities=19% Similarity=0.258 Sum_probs=42.1
Q ss_pred CCCCCHHHHHHHHHHhhhcCc-eeEEEecCCC---CCCCHHHHHHHHH-HHH
Q 013140 127 DPMWTKEETDQLFELCERFDL-RFIVIADRFP---SSRTVEELKDRYY-VSR 173 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~---~~RtvEDLK~RYY-V~~ 173 (449)
-..||.||++.|.+.+++|+- +|--|...|. ..||--|||+||. +.+
T Consensus 13 r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~f~~RT~v~lKdrWrnllk 64 (105)
T 2aje_A 13 RRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVH 64 (105)
T ss_dssp CCSCCHHHHHHHHHHHHHHCSSSHHHHHSSSSSSTTCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCChHHHHHHhccccCCCCHHHHHHHHHHHHh
Confidence 356999999999999999998 9999998774 5899999999999 665
No 15
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=95.88 E-value=0.0018 Score=52.02 Aligned_cols=42 Identities=26% Similarity=0.329 Sum_probs=40.1
Q ss_pred CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH
Q 013140 127 DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY 170 (449)
-..||.||-+.|++|..+|+-+|-.|+..+ .||--++|+||+
T Consensus 23 k~~wT~EED~~L~~l~~~~G~kW~~IA~~l--gRt~~q~knRw~ 64 (73)
T 2llk_A 23 VGKYTPEEIEKLKELRIKHGNDWATIGAAL--GRSASSVKDRCR 64 (73)
T ss_dssp CCSSCHHHHHHHHHHHHHHSSCHHHHHHHH--TSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCHHHHHHHh--CCCHHHHHHHHH
Confidence 457999999999999999999999999998 899999999998
No 16
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=95.86 E-value=0.0041 Score=45.77 Aligned_cols=44 Identities=30% Similarity=0.584 Sum_probs=39.7
Q ss_pred CCCCCCHHHHHHHHHHhhhcCc-eeEEEecCCCCCCCHHHHHHHHH
Q 013140 126 TDPMWTKEETDQLFELCERFDL-RFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 126 ~d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~~RtvEDLK~RYY 170 (449)
....||.||...|.+++..|+- +|-.|+..+ ..||-.+.++||+
T Consensus 2 ~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~-~~Rt~~qcr~Rw~ 46 (52)
T 1gvd_A 2 IKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHL-KGRIGKQCRERWH 46 (52)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTS-TTCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCcChHHHHHHHc-CCCCHHHHHHHHH
Confidence 4567999999999999999997 699999887 4799999999998
No 17
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=95.86 E-value=0.0024 Score=48.69 Aligned_cols=45 Identities=27% Similarity=0.451 Sum_probs=40.0
Q ss_pred cCCCCCCHHHHHHHHHHhhhcCc-eeEEEecCCCCCCCHHHHHHHHH
Q 013140 125 LTDPMWTKEETDQLFELCERFDL-RFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 125 L~d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~~RtvEDLK~RYY 170 (449)
|....||.||-..|+++++.|+. +|-.|+..++ .||-.+.++||.
T Consensus 6 ~~~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~-~Rt~~qcr~r~~ 51 (60)
T 1x41_A 6 SGDPSWTAQEEMALLEAVMDCGFGNWQDVANQMC-TKTKEECEKHYM 51 (60)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCTTCHHHHHHHHT-TSCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcCcHHHHHHHhC-CCCHHHHHHHHH
Confidence 34567999999999999999995 9999998875 599999999997
No 18
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=95.84 E-value=0.0033 Score=51.57 Aligned_cols=47 Identities=23% Similarity=0.320 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHHHhhhcCc-eeEEEecCCC---CCCCHHHHHHHHH-HHHHH
Q 013140 129 MWTKEETDQLFELCERFDL-RFIVIADRFP---SSRTVEELKDRYY-VSRAI 175 (449)
Q Consensus 129 ~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~---~~RtvEDLK~RYY-V~~kl 175 (449)
.||.||.+.|.+++++|+. +|-.|...|. ..||--|||+||. .+++-
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~W~~I~~~~~~~~~~RT~~~lKdrWrnllk~~ 53 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTA 53 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCcHHHHHhhccccCCCCHHHHHHHHHHHHHhc
Confidence 5999999999999999999 9999987632 5899999999999 66543
No 19
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=95.80 E-value=0.003 Score=47.95 Aligned_cols=45 Identities=33% Similarity=0.513 Sum_probs=40.9
Q ss_pred CCCCCCHHHHHHHHHHhhhcC-ceeEEEecCCCCCCCHHHHHHHHH
Q 013140 126 TDPMWTKEETDQLFELCERFD-LRFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 126 ~d~~WT~eETdyLfdLc~~fD-LRw~VI~DRy~~~RtvEDLK~RYY 170 (449)
....||.||-..|++++++|+ -+|-.|+...+..||-.+.++||.
T Consensus 8 ~~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~~~~Rt~~qcr~r~~ 53 (58)
T 2elk_A 8 FDENWGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYL 53 (58)
T ss_dssp CCCCCCHHHHHHHHHHHHHTTTTCHHHHHHHHCSSCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHHCCCCCHHHHHHHHH
Confidence 356799999999999999999 699999988776899999999997
No 20
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=95.66 E-value=0.0045 Score=49.57 Aligned_cols=46 Identities=22% Similarity=0.321 Sum_probs=41.0
Q ss_pred CCCCCCHHHHHHHHHHhhhcC----ceeEEEecCCCCCCCHHHHHHHHH-HH
Q 013140 126 TDPMWTKEETDQLFELCERFD----LRFIVIADRFPSSRTVEELKDRYY-VS 172 (449)
Q Consensus 126 ~d~~WT~eETdyLfdLc~~fD----LRw~VI~DRy~~~RtvEDLK~RYY-V~ 172 (449)
....||.+|...|..++..|+ -||-.|+...+ .||.++.+.||. ++
T Consensus 17 ~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vp-GRT~~qcr~Ry~~L~ 67 (73)
T 2cqr_A 17 AEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVP-SKSKEDCIARYKLLV 67 (73)
T ss_dssp SSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCS-SSCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 345799999999999999999 69999998876 599999999998 65
No 21
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=95.65 E-value=0.0032 Score=54.47 Aligned_cols=52 Identities=25% Similarity=0.475 Sum_probs=44.2
Q ss_pred HHhhcC----CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH-HHH
Q 013140 121 YEKYLT----DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY-VSR 173 (449)
Q Consensus 121 Y~~~L~----d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY-V~~ 173 (449)
|..+|. ...||.||-..|+++...|+-+|-.|+..+ +.||-.++|.||+ +.+
T Consensus 69 w~~~l~p~~~~~~WT~eEd~~L~~~~~~~G~~W~~Ia~~l-~gRt~~~~k~r~~~~~~ 125 (128)
T 1h8a_C 69 WHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLL-PGRTDNAVKNHWNSTMR 125 (128)
T ss_dssp HHHTTCSSSCCSCCCHHHHHHHHHHHHHHCSCHHHHGGGS-TTCCHHHHHHHHHTTTT
T ss_pred HHHhcccccccccCCHHHHHHHHHHHHHHCcCHHHHHHHC-CCCCHHHHHHHHHHHHh
Confidence 555553 457999999999999999999999999776 4799999999999 544
No 22
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=95.64 E-value=0.0042 Score=47.01 Aligned_cols=45 Identities=31% Similarity=0.541 Sum_probs=40.3
Q ss_pred cCCCCCCHHHHHHHHHHhhhcCc-eeEEEecCCCCCCCHHHHHHHHH
Q 013140 125 LTDPMWTKEETDQLFELCERFDL-RFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 125 L~d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~~RtvEDLK~RYY 170 (449)
+....||.||...|.+++..|+. +|-.|+..++ .||--+.++||+
T Consensus 6 ~~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~-~Rt~~qcr~Rw~ 51 (60)
T 2d9a_A 6 SGKVKWTHEEDEQLRALVRQFGQQDWKFLASHFP-NRTDQQCQYRWL 51 (60)
T ss_dssp CCCSCCCHHHHHHHHHHHHHTCTTCHHHHHHHCS-SSCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcc-CCCHHHHHHHHH
Confidence 34467999999999999999995 9999998875 699999999998
No 23
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.56 E-value=0.0022 Score=50.76 Aligned_cols=51 Identities=24% Similarity=0.363 Sum_probs=43.6
Q ss_pred CCCCCCHHHHHHHHHHhhhcC------ceeEEEecCCCCCCCHHHHHHHHH-HHHHHHH
Q 013140 126 TDPMWTKEETDQLFELCERFD------LRFIVIADRFPSSRTVEELKDRYY-VSRAILI 177 (449)
Q Consensus 126 ~d~~WT~eETdyLfdLc~~fD------LRw~VI~DRy~~~RtvEDLK~RYY-V~~kl~~ 177 (449)
....||.||-..|.++...|+ -+|-.|+.-++ .||..+.++||. ...+++.
T Consensus 7 ~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~-~Rt~~qcr~r~~~~l~~~~k 64 (75)
T 2yum_A 7 GNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELG-NRTAKQVASQVQKYFIKLTK 64 (75)
T ss_dssp CSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHS-SSCHHHHHHHHHHHHGGGST
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhC-CCCHHHHHHHHHHHHHHHHh
Confidence 345799999999999999999 79999998765 599999999997 6665553
No 24
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=95.39 E-value=0.01 Score=51.61 Aligned_cols=54 Identities=26% Similarity=0.437 Sum_probs=45.1
Q ss_pred HHhhcC----CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH-HHHHH
Q 013140 121 YEKYLT----DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY-VSRAI 175 (449)
Q Consensus 121 Y~~~L~----d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY-V~~kl 175 (449)
|..||. ...||.||-..|++++..|+-+|-.|+..++ .||--++|.||| ..++-
T Consensus 44 w~~~l~p~~~~~~Wt~eEd~~L~~~~~~~G~~W~~Ia~~l~-gRt~~~~k~rw~~~l~~~ 102 (131)
T 3zqc_A 44 WFNHLDPAVVKHAWTPEEDETIFRNYLKLGSKWSVIAKLIP-GRTDNAIKNRWNSSISKR 102 (131)
T ss_dssp HHHHTSTTCCCSCCCHHHHHHHHHHHHHSCSCHHHHTTTST-TCCHHHHHHHHHHTTGGG
T ss_pred HhhccCccccCCCCCHHHHHHHHHHHHHHCcCHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 555553 3579999999999999999999999997654 799999999999 55443
No 25
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=95.14 E-value=0.0048 Score=54.03 Aligned_cols=48 Identities=23% Similarity=0.310 Sum_probs=42.6
Q ss_pred CCCCCHHHHHHHHHHhhhcCc-eeEEEecCCC---CCCCHHHHHHHHH-HHHH
Q 013140 127 DPMWTKEETDQLFELCERFDL-RFIVIADRFP---SSRTVEELKDRYY-VSRA 174 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~---~~RtvEDLK~RYY-V~~k 174 (449)
-..||.||.+.|.+++++|+- +|-.|...|. ..||--|||+||. .++.
T Consensus 17 r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~ 69 (121)
T 2juh_A 17 RRPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHT 69 (121)
T ss_dssp SCCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSCCSSCCSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 346999999999999999998 9999988764 5899999999999 7764
No 26
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=95.12 E-value=0.0092 Score=49.92 Aligned_cols=50 Identities=24% Similarity=0.355 Sum_probs=43.3
Q ss_pred CCCCCHHHHHHHHHHhhhcC----ceeEEEecCCCCCCCHHHHHHHHH-HHHHHHH
Q 013140 127 DPMWTKEETDQLFELCERFD----LRFIVIADRFPSSRTVEELKDRYY-VSRAILI 177 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fD----LRw~VI~DRy~~~RtvEDLK~RYY-V~~kl~~ 177 (449)
...||.||-..|..++..|+ -||-.|+...+ .||.++.+.||- ....+..
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vp-GRT~~q~k~ry~~l~~dv~~ 62 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARAVE-GRTPEEVKKHYEILVEDIKY 62 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHST-TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHH
Confidence 35799999999999999996 68999998887 499999999999 7776543
No 27
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=95.08 E-value=0.0058 Score=49.50 Aligned_cols=43 Identities=26% Similarity=0.349 Sum_probs=39.2
Q ss_pred CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH
Q 013140 127 DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY 170 (449)
...||.||...|.++++.|+-+|--|+...+ .||.++.++||.
T Consensus 18 ~~~WT~eEd~~Ll~~v~~~G~~W~~IA~~v~-~RT~~qcr~r~~ 60 (79)
T 2yus_A 18 GREWTEQETLLLLEALEMYKDDWNKVSEHVG-SRTQDECILHFL 60 (79)
T ss_dssp SCCCCHHHHHHHHHHHHHSSSCHHHHHHHHS-SCCHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHhCCCHHHHHHHcC-CCCHHHHHHHHH
Confidence 4679999999999999999999999988765 599999999997
No 28
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=95.06 E-value=0.0051 Score=53.94 Aligned_cols=48 Identities=25% Similarity=0.292 Sum_probs=41.7
Q ss_pred CCCCCHHHHHHHHHHhhhcCc-eeEEEecCCC---CCCCHHHHHHHHH-HHHH
Q 013140 127 DPMWTKEETDQLFELCERFDL-RFIVIADRFP---SSRTVEELKDRYY-VSRA 174 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~---~~RtvEDLK~RYY-V~~k 174 (449)
-..||.||.+.|.+++++|+- +|-.|...+. ..||--|||+||. ..+.
T Consensus 31 r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlKdRWrnllk~ 83 (122)
T 2roh_A 31 RRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKWKTLVHT 83 (122)
T ss_dssp CCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 357999999999999999998 9999987642 6899999999999 6653
No 29
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.69 E-value=0.012 Score=45.84 Aligned_cols=45 Identities=18% Similarity=0.366 Sum_probs=40.9
Q ss_pred cCCCCCCHHHHHHHHHHhhhcC-ceeEEEecCCCCCCCHHHHHHHHH
Q 013140 125 LTDPMWTKEETDQLFELCERFD-LRFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 125 L~d~~WT~eETdyLfdLc~~fD-LRw~VI~DRy~~~RtvEDLK~RYY 170 (449)
++...||.||-..|.+++..|+ -+|-.|+..++ .||-.+.++||+
T Consensus 7 ~k~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l~-~Rt~~qcr~Rw~ 52 (70)
T 2dim_A 7 GKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLH-RKSAKQCKARWY 52 (70)
T ss_dssp STTCCCCHHHHHHHHHHHHHTCSSCHHHHHHHST-TCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHhc-CCCHHHHHHHHH
Confidence 4456799999999999999999 79999998876 799999999998
No 30
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=94.52 E-value=0.011 Score=52.87 Aligned_cols=52 Identities=25% Similarity=0.481 Sum_probs=44.8
Q ss_pred HHhhcC----CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH-HHH
Q 013140 121 YEKYLT----DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY-VSR 173 (449)
Q Consensus 121 Y~~~L~----d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY-V~~ 173 (449)
|..+|. ...||.||-.-|+++...|+-+|-.|+..+ +.||-.++|.||+ ..+
T Consensus 100 w~~~l~p~~~~~~WT~eEd~~L~~~~~~~g~~W~~Ia~~l-~gRt~~~~knr~~~~~r 156 (159)
T 1h89_C 100 WHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLL-PGRTDNAIKNHWNSTMR 156 (159)
T ss_dssp HHHTTCTTSCCSCCCHHHHHHHHHHHHHHCSCHHHHHTTS-TTCCHHHHHHHHHTTTC
T ss_pred HHHHhCccccccCCChHHHHHHHHHHHHHCCCHHHHHHHC-CCCCHHHHHHHHHHHHh
Confidence 666663 457999999999999999999999999766 4799999999999 543
No 31
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=94.49 E-value=0.011 Score=47.51 Aligned_cols=43 Identities=23% Similarity=0.353 Sum_probs=38.2
Q ss_pred CCCCCHHHHHHHHHHhhhcCc----eeEEEecCCCCCCCHHHHHHHHH
Q 013140 127 DPMWTKEETDQLFELCERFDL----RFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDL----Rw~VI~DRy~~~RtvEDLK~RYY 170 (449)
+..||.+|-.-|-.-+..||. ||-.|++..+. ||+||.+.||-
T Consensus 8 ~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~g-KT~eE~~~hY~ 54 (73)
T 1wgx_A 8 DKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGS-RSPEECQRKYM 54 (73)
T ss_dssp SSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTT-SCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcCC-CCHHHHHHHHH
Confidence 467999999999999999997 78888887765 99999999997
No 32
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.14 E-value=0.014 Score=44.64 Aligned_cols=44 Identities=20% Similarity=0.384 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHHHH
Q 013140 128 PMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYYVS 172 (449)
Q Consensus 128 ~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYYV~ 172 (449)
+.||.||-..+.+....|+=+|-.|+ .+-+.||+.|+..+||..
T Consensus 13 ~~WT~eE~~~F~~~~~~~gk~w~~Ia-~~l~~rt~~~~v~~Yy~~ 56 (61)
T 2eqr_A 13 NVWTDHEKEIFKDKFIQHPKNFGLIA-SYLERKSVPDCVLYYYLT 56 (61)
T ss_dssp CSCCHHHHHHHHHHHHHSTTCHHHHH-HHCTTSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCHHHHH-HHcCCCCHHHHHHHHHHh
Confidence 46999999999999999999999999 555679999999999944
No 33
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=93.33 E-value=0.02 Score=45.71 Aligned_cols=42 Identities=29% Similarity=0.472 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHHHHhhhcC----ceeEEEecCCCCCCCHHHHHHHHH
Q 013140 127 DPMWTKEETDQLFELCERFD----LRFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fD----LRw~VI~DRy~~~RtvEDLK~RYY 170 (449)
...||.||-..|-.++..|+ =||-.|+.-. .||++|++.||=
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l--gRt~~eV~~~y~ 53 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL--GRSVTDVTTKAK 53 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH--TSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh--CCCHHHHHHHHH
Confidence 45799999999999999997 6899998876 599999999875
No 34
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=92.49 E-value=0.049 Score=46.99 Aligned_cols=46 Identities=24% Similarity=0.390 Sum_probs=41.2
Q ss_pred CCCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH-HH
Q 013140 126 TDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY-VS 172 (449)
Q Consensus 126 ~d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY-V~ 172 (449)
+-..||.||.+.|..++..|+.+|-.|+..++ .||-.+..+||+ +.
T Consensus 10 kk~~WT~eED~~L~~~v~~~G~~W~~Ia~~~~-~Rt~~qcr~Rw~~~l 56 (126)
T 3osg_A 10 KKQKFTPEEDEMLKRAVAQHGSDWKMIAATFP-NRNARQCRDRWKNYL 56 (126)
T ss_dssp SSCCCCHHHHHHHHHHHHHHTTCHHHHHHTCT-TCCHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCHHHHHHHcC-CCCHHHHHHHHhhhc
Confidence 34579999999999999999999999998875 699999999999 54
No 35
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=91.79 E-value=0.081 Score=43.85 Aligned_cols=46 Identities=28% Similarity=0.557 Sum_probs=40.5
Q ss_pred cCCCCCCHHHHHHHHHHhhhcCc-eeEEEecCCCCCCCHHHHHHHHH-H
Q 013140 125 LTDPMWTKEETDQLFELCERFDL-RFIVIADRFPSSRTVEELKDRYY-V 171 (449)
Q Consensus 125 L~d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~~RtvEDLK~RYY-V 171 (449)
|.-..||.||...|..++..|+- +|-.|+..+ +.||..+.++||. +
T Consensus 2 l~k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~l-~~Rt~~qcr~Rw~~~ 49 (105)
T 1gv2_A 2 LIKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHL-KGRIGKQCRERWHNH 49 (105)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHCTTCHHHHHTTS-TTCCHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcHHHHhhhh-cCCCHHHHHHHHHhc
Confidence 34567999999999999999997 799999776 4799999999998 5
No 36
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=90.13 E-value=0.093 Score=43.91 Aligned_cols=42 Identities=24% Similarity=0.396 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHHHhhhcCc-eeEEEecCCCCCCCHHHHHHHHH-H
Q 013140 129 MWTKEETDQLFELCERFDL-RFIVIADRFPSSRTVEELKDRYY-V 171 (449)
Q Consensus 129 ~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~~RtvEDLK~RYY-V 171 (449)
.||.||-+.|..++..|+- +|..|+...+ .||-.+..+||. +
T Consensus 3 ~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~-~Rt~~qcr~Rw~~~ 46 (107)
T 2k9n_A 3 KFTEEEDLKLQQLVMRYGAKDWIRISQLMI-TRNPRQCRERWNNY 46 (107)
T ss_dssp SSCHHHHHHHHHHHHHHCSSCHHHHHHHTT-TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHhhhcC-CCCHHHHHHHHHHH
Confidence 6999999999999999996 8999988764 799999999998 5
No 37
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=89.01 E-value=0.085 Score=42.54 Aligned_cols=41 Identities=24% Similarity=0.254 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHHhhhcCc----eeEEEecCCCCCCCHHHHHHHH
Q 013140 128 PMWTKEETDQLFELCERFDL----RFIVIADRFPSSRTVEELKDRY 169 (449)
Q Consensus 128 ~~WT~eETdyLfdLc~~fDL----Rw~VI~DRy~~~RtvEDLK~RY 169 (449)
..||++|-.-|=.....|+- ||-.|+...+ .||+||++.+|
T Consensus 21 ~~WT~eE~K~FE~ALa~yp~~tpdRWekIA~~Vp-GKT~eEVk~hY 65 (74)
T 4eef_G 21 RPWKFSENIAFEIALSFTNKDTPDRWKKVAQYVK-GRTPEEVKKHY 65 (74)
T ss_dssp -CCCTTHHHHHHHHTSSSCSSCCSSSTTTGGGSC-SSCHHHHHGGG
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHcC-CCCHHHHHHHH
Confidence 46999999999899999998 7777766655 49999999887
No 38
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=88.74 E-value=0.22 Score=44.32 Aligned_cols=43 Identities=28% Similarity=0.585 Sum_probs=38.8
Q ss_pred CCCCCHHHHHHHHHHhhhcCc-eeEEEecCCCCCCCHHHHHHHHH
Q 013140 127 DPMWTKEETDQLFELCERFDL-RFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~~RtvEDLK~RYY 170 (449)
...||.||...|.+++..|+- +|-.|+.-+ +.||-.+.++||+
T Consensus 58 ~~~Wt~eEd~~L~~~v~~~g~~~W~~Ia~~l-~~Rt~~qcr~Rw~ 101 (159)
T 1h89_C 58 KGPWTKEEDQRVIKLVQKYGPKRWSVIAKHL-KGRIGKQCRERWH 101 (159)
T ss_dssp CSCCCHHHHHHHHHHHHHHCSCCHHHHHHTS-TTCCHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHhCcccHHHHHHHc-CCCCHHHHHHHHH
Confidence 457999999999999999996 799998766 5799999999998
No 39
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=88.35 E-value=0.18 Score=43.33 Aligned_cols=43 Identities=26% Similarity=0.509 Sum_probs=38.4
Q ss_pred CCCCCHHHHHHHHHHhhhcCc-eeEEEecCCCCCCCHHHHHHHHH
Q 013140 127 DPMWTKEETDQLFELCERFDL-RFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~~RtvEDLK~RYY 170 (449)
-..||.||...|.+++..|+- +|-.|+..+ +.||-.+.++||.
T Consensus 27 k~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~l-~~Rt~~qcr~Rw~ 70 (128)
T 1h8a_C 27 KGPWTKEEDQRVIEHVQKYGPKRWSDIAKHL-KGRIGKQCRERWH 70 (128)
T ss_dssp CSCCCHHHHHHHHHHHHHTCSCCHHHHHHHS-SSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHh-cCCcHHHHHHHHH
Confidence 357999999999999999996 699998766 4799999999998
No 40
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=87.50 E-value=0.29 Score=42.31 Aligned_cols=44 Identities=16% Similarity=0.272 Sum_probs=38.8
Q ss_pred CCCCHHHHHHHHHHhhhcC-ceeEEEecCCCCCCCHHHHHHHHH-HH
Q 013140 128 PMWTKEETDQLFELCERFD-LRFIVIADRFPSSRTVEELKDRYY-VS 172 (449)
Q Consensus 128 ~~WT~eETdyLfdLc~~fD-LRw~VI~DRy~~~RtvEDLK~RYY-V~ 172 (449)
..||.||-+.|..++..|+ -.|-.|+... +.||-.+..+||+ +.
T Consensus 3 g~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~-~~Rt~~qcr~Rw~~~l 48 (131)
T 3zqc_A 3 GPFTEAEDDLIREYVKENGPQNWPRITSFL-PNRSPKQCRERWFNHL 48 (131)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCCGGGGTTSC-TTSCHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhCcCCHHHHHHHH-CCCCHHHHHHHHhhcc
Confidence 3699999999999999999 5799998776 4799999999998 54
No 41
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=87.41 E-value=0.27 Score=41.22 Aligned_cols=50 Identities=20% Similarity=0.529 Sum_probs=38.4
Q ss_pred CCCHHHHHHHHHHhhhcCc---eeEEEecCCCCCCCHHHHHHHHH-HHHHHHHHcC
Q 013140 129 MWTKEETDQLFELCERFDL---RFIVIADRFPSSRTVEELKDRYY-VSRAILIARA 180 (449)
Q Consensus 129 ~WT~eETdyLfdLc~~fDL---Rw~VI~DRy~~~RtvEDLK~RYY-V~~kl~~~R~ 180 (449)
-||+||-.-++..|++=+- .|.+|+-.. .+||-+++++||| .. +|++.-.
T Consensus 35 lWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L-~Nks~nqV~~RFq~Lm-~Lf~~~~ 88 (95)
T 1ug2_A 35 LWTREADRVILTMCQEQGAQPHTFSVISQQL-GNKTPVEVSHRFRELM-QLFHTAC 88 (95)
T ss_dssp SSCHHHHHHHHHHHHHTTSCTTTHHHHHHHH-SSCCHHHHHHHHHHHH-HHHHHCS
T ss_pred EeccccCHHHHHHHHhcCCChhHHHHHHHHH-ccCCHHHHHHHHHHHH-HHHHHHh
Confidence 4999999999999999655 666655332 3799999999999 65 4665543
No 42
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=81.43 E-value=0.34 Score=38.60 Aligned_cols=40 Identities=15% Similarity=0.546 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHHhhhcCc---eeEEEecCCCCCCCHHHHHHHHH
Q 013140 129 MWTKEETDQLFELCERFDL---RFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 129 ~WT~eETdyLfdLc~~fDL---Rw~VI~DRy~~~RtvEDLK~RYY 170 (449)
-||+||-.-++.-|++=+- .|.+|+-.. +||-+++++||-
T Consensus 16 lWTReeDR~IL~~cq~~G~s~~tfa~iA~~L--nks~~QV~~RF~ 58 (70)
T 2lr8_A 16 LWTRNDDRVILLECQKRGPSSKTFAYLAAKL--DKNPNQVSERFQ 58 (70)
Confidence 4999999999999999888 999998776 699999999997
No 43
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.13 E-value=0.9 Score=34.84 Aligned_cols=48 Identities=19% Similarity=0.409 Sum_probs=39.8
Q ss_pred CCCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHHHHH
Q 013140 126 TDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYYVSR 173 (449)
Q Consensus 126 ~d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYYV~~ 173 (449)
..+.||.||.....+-+..|+=.|.-|+--+-..||+.|+..=||.-+
T Consensus 8 ~~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~wK 55 (63)
T 2yqk_A 8 IEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWK 55 (63)
T ss_dssp CCCSCCHHHHHHHHHHHHHTCSCHHHHHHHSCTTSCHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHhCccHHHHHHHHcCCCcHHHHHHHHhccc
Confidence 457899999999889999999999999753456899999997777443
No 44
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=73.27 E-value=0.96 Score=43.58 Aligned_cols=43 Identities=21% Similarity=0.392 Sum_probs=39.2
Q ss_pred CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHH
Q 013140 127 DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYY 170 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYY 170 (449)
...||.||...+.+..+.|+=.|.-|++- -..||+.+.|..||
T Consensus 133 s~~WTeEE~~lFleAl~kYGKDW~~IAk~-VgTKT~~QcKnfY~ 175 (235)
T 2iw5_B 133 NARWTTEEQLLAVQAIRKYGRDFQAISDV-IGNKSVVQVKNFFV 175 (235)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSCHHHHHHH-HSSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHH-cCCCCHHHHHHHHH
Confidence 46799999999999999999999999876 45799999999998
No 45
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=66.51 E-value=3.1 Score=32.54 Aligned_cols=46 Identities=20% Similarity=0.377 Sum_probs=39.7
Q ss_pred CCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHHHHH
Q 013140 128 PMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYYVSR 173 (449)
Q Consensus 128 ~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYYV~~ 173 (449)
+.||.||.....+-+..|+=-|.-|+--+-+.+|+.|+..=||.-+
T Consensus 9 ~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~wK 54 (70)
T 2crg_A 9 EEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWK 54 (70)
T ss_dssp CCCCHHHHHHHHHHHHHTCSCHHHHHHTTCSSSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCccHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 5799999998888899999999999854667899999998888544
No 46
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=64.21 E-value=1.8 Score=42.04 Aligned_cols=47 Identities=17% Similarity=0.414 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHHhhhcCce------eEEEecCCCCCCCHHHHHHHHH--HHHHH
Q 013140 128 PMWTKEETDQLFELCERFDLR------FIVIADRFPSSRTVEELKDRYY--VSRAI 175 (449)
Q Consensus 128 ~~WT~eETdyLfdLc~~fDLR------w~VI~DRy~~~RtvEDLK~RYY--V~~kl 175 (449)
..||.||-..|+++.++|+-+ |-.|+ .+-..||--.+|+||. +.++|
T Consensus 9 ~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IA-k~LpGRT~nsIRnRw~~~L~~~l 63 (246)
T 1ign_A 9 ASFTDEEDEFILDVVRKNPTRRTTHTLYDEIS-HYVPNHTGNSIRHRFRVYLSKRL 63 (246)
T ss_dssp CCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHT-TTSTTSCHHHHHHHHHHTTGGGC
T ss_pred CCCCHHHHHHHHHHHHHhCcCccccccHHHHH-HHcCCCCHHHHHHHHHHHHhhhc
Confidence 479999999999999999987 99999 4566899999999999 66654
No 47
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=54.49 E-value=6.4 Score=34.36 Aligned_cols=32 Identities=22% Similarity=0.178 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHH
Q 013140 327 KRVEQALQELGVNLKPKVPTKAVCAEHLELRKE 359 (449)
Q Consensus 327 K~Ie~~L~ELgv~~kP~mPT~~Vc~~~~eLr~~ 359 (449)
..+...|.+.||..-. |+|.+-|..||.|..+
T Consensus 81 p~~~~~l~~~GI~vE~-m~T~aAcrTyNiL~~E 112 (132)
T 2gm2_A 81 TDVLAACLTRGIGLEA-MTNAAAARTYNVLASE 112 (132)
T ss_dssp HHHHHHHHHHTCEEEE-ECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEE-eCHHHHHHHHHHHHhC
Confidence 4677899999999776 9999999999999864
No 48
>4b4c_A Chromodomain-helicase-DNA-binding protein 1; chromatin-remodeling, histone acetylation COMP chromatin regulation, transcription; 1.62A {Homo sapiens}
Probab=52.87 E-value=7.7 Score=35.43 Aligned_cols=42 Identities=14% Similarity=0.212 Sum_probs=29.9
Q ss_pred CCCCHHHHHHHHHHhhhcC---ceeEEEecCC-CCCCCHHHHHHHHH
Q 013140 128 PMWTKEETDQLFELCERFD---LRFIVIADRF-PSSRTVEELKDRYY 170 (449)
Q Consensus 128 ~~WT~eETdyLfdLc~~fD---LRw~VI~DRy-~~~RtvEDLK~RYY 170 (449)
.+||+.|+..|..-|.+|+ -||=.|..-- -..+|.+||++ ||
T Consensus 8 ~~~t~~E~r~fira~~kfG~~~~r~~~I~~da~L~~Ks~~~v~~-y~ 53 (211)
T 4b4c_A 8 KGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRR-LG 53 (211)
T ss_dssp CCSCHHHHHHHHHHHTTCSSGGGCHHHHHHHTTCTTSCHHHHHH-HH
T ss_pred CCCCHHHHHHHHHHHHHHCCchhHHHHHHHHhccCCCCHHHHHH-HH
Confidence 4799999999999999998 2443332100 13689999995 55
No 49
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=51.35 E-value=6.4 Score=34.56 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=27.7
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHH
Q 013140 327 KRVEQALQELGVNLKPKVPTKAVCAEHLELRKE 359 (449)
Q Consensus 327 K~Ie~~L~ELgv~~kP~mPT~~Vc~~~~eLr~~ 359 (449)
..+...|.+.||.+-. |+|.+-|..||.|..+
T Consensus 84 p~l~~~l~~~GI~vE~-M~T~aAcrTyNiL~~E 115 (135)
T 2fvt_A 84 RQLREALRGVNVVLDT-MQTGPAIRTYNIMIGE 115 (135)
T ss_dssp HHHHHHHHTTTCEEEE-ECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEE-eCHHHHHHHHHHHHhC
Confidence 4677889999999776 9999999999999864
No 50
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=50.80 E-value=6.7 Score=33.79 Aligned_cols=32 Identities=16% Similarity=0.245 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHH
Q 013140 327 KRVEQALQELGVNLKPKVPTKAVCAEHLELRKE 359 (449)
Q Consensus 327 K~Ie~~L~ELgv~~kP~mPT~~Vc~~~~eLr~~ 359 (449)
..+...|.+.||..-. |+|.+-|..||.|..+
T Consensus 79 ~~~~~~l~~~gI~ve~-m~T~~A~rtyN~L~~E 110 (122)
T 2ab1_A 79 SSTVEYLKKHGIDVRV-LQTEQAVKEYNALVAQ 110 (122)
T ss_dssp HHHHHHHHHTTCEEEE-ECHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCEEEE-eCHHHHHHHHHHHHhC
Confidence 4678899999999776 9999999999999764
No 51
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=49.59 E-value=7.1 Score=33.75 Aligned_cols=32 Identities=19% Similarity=0.113 Sum_probs=27.7
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHH
Q 013140 327 KRVEQALQELGVNLKPKVPTKAVCAEHLELRKE 359 (449)
Q Consensus 327 K~Ie~~L~ELgv~~kP~mPT~~Vc~~~~eLr~~ 359 (449)
..+...|.+.||..-. |+|.+-|..||.|..+
T Consensus 85 p~~~~~l~~~GI~vE~-m~T~aAcrtyNiL~~E 116 (128)
T 2fi9_A 85 EELRVLLWEKRISSDT-MSTGAAVRTFNVLLAE 116 (128)
T ss_dssp HHHHHHHHHTTCEEEE-ECHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCEEEE-eCHHHHHHHHHHHHhC
Confidence 4677899999999776 9999999999999764
No 52
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=47.05 E-value=30 Score=26.87 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 013140 346 TKAVCAEHLELRKEILTLLNLQKQLQYKEAEGSSYR 381 (449)
Q Consensus 346 T~~Vc~~~~eLr~~Iv~LleLKK~l~k~E~El~~lr 381 (449)
+..+...-++|+..=..+-+||+.++.++.||+++|
T Consensus 41 ~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 41 SEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 344555567788888889999999999999999886
No 53
>2ebi_A DNA binding protein GT-1; DNA-binding domain, phosphorylation; HET: DNA; NMR {Arabidopsis thaliana} PDB: 2jmw_A*
Probab=45.84 E-value=7.7 Score=30.84 Aligned_cols=23 Identities=26% Similarity=0.463 Sum_probs=19.9
Q ss_pred CCCCCHHHHHHHHHHhhhcCcee
Q 013140 127 DPMWTKEETDQLFELCERFDLRF 149 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDLRw 149 (449)
.+.||.+||..|+++....+.+|
T Consensus 4 ~~~Wt~~Et~~Li~~~~e~~~~f 26 (86)
T 2ebi_A 4 AETWVQDETRSLIMFRRGMDGLF 26 (86)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 36799999999999999877665
No 54
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=40.33 E-value=14 Score=30.36 Aligned_cols=45 Identities=27% Similarity=0.369 Sum_probs=39.1
Q ss_pred CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHHHHHHHHH
Q 013140 127 DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYYVS 172 (449)
Q Consensus 127 d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDLK~RYYV~ 172 (449)
-+.||.||-....+-...|+=.|..|++- -+.||+.|+-+=||.-
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK~F~~Ia~~-l~~Kt~~~cV~~YY~~ 87 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPKNFGLIASF-LERKTVAECVLYYYLT 87 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTTCHHHHHHT-CTTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHHHHH-cCCCCHHHHHHHHhcc
Confidence 35799999999999999999999999754 5689999999988844
No 55
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=38.70 E-value=25 Score=34.93 Aligned_cols=59 Identities=29% Similarity=0.401 Sum_probs=43.0
Q ss_pred ccccCHHH---HHhhcCC--CCCCHHHHHHHHHHhhhcCc-eeEEEecCCCCCCCHHHHHHHHH-HHH
Q 013140 113 VVKYTDEE---YEKYLTD--PMWTKEETDQLFELCERFDL-RFIVIADRFPSSRTVEELKDRYY-VSR 173 (449)
Q Consensus 113 ip~ytdeE---Y~~~L~d--~~WT~eETdyLfdLc~~fDL-Rw~VI~DRy~~~RtvEDLK~RYY-V~~ 173 (449)
...+|+|| -+++|.. .+||+.+-.....-|..|+- .|--|+.=+ ...|+||+ .+|| |.-
T Consensus 91 ~~~LTeeE~~eKe~Ll~eGF~~W~rrdf~~Fi~a~~kyGr~~~~~IA~ev-~~Kt~eEV-~~Y~~vFw 156 (304)
T 1ofc_X 91 AEPLTEEEIQEKENLLSQGFTAWTKRDFNQFIKANEKYGRDDIDNIAKDV-EGKTPEEV-IEYNAVFW 156 (304)
T ss_dssp CCCCCHHHHHHHHHHTTSSCTTCCHHHHHHHHHHHHHHCTTCHHHHTTSS-TTCCHHHH-HHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHHhCHHHHHHHHHHh-cCCCHHHH-HHHHHHHH
Confidence 34589887 5677765 47999999999999999984 232233322 26999999 7888 653
No 56
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=37.39 E-value=21 Score=23.94 Aligned_cols=28 Identities=29% Similarity=0.479 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 013140 355 ELRKEILTLLNLQKQLQYKEAEGSSYRDGSY 385 (449)
Q Consensus 355 eLr~~Iv~LleLKK~l~k~E~El~~lr~~~~ 385 (449)
.|.++|.. |||.+..+.+||..|++.|+
T Consensus 6 alkqeiaa---lkkeiaalkfeiaalkqgyy 33 (33)
T 4dzn_A 6 ALKQEIAA---LKKEIAALKFEIAALKQGYY 33 (33)
T ss_dssp HHHHHHHH---HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHcccC
Confidence 45666654 68999999999999988764
No 57
>2yf2_A C4B binding protein; immune system, complement system; 2.24A {Gallus gallus}
Probab=33.08 E-value=75 Score=24.22 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=21.1
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhhhh
Q 013140 328 RVEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNLQKQ---LQYKEAEGSS 379 (449)
Q Consensus 328 ~Ie~~L~ELgv~~kP~mPT~~Vc~~~~eLr~~Iv~LleLKK~---l~k~E~El~~ 379 (449)
-|..+..++|+ ||+++ -+||++||- ++|++-|++-
T Consensus 15 yiqsvv~DC~~------P~~~~-----------rTLLEi~KL~LEIQKL~~EL~g 52 (65)
T 2yf2_A 15 YIQSVVSDCHV------PTEDV-----------KTLLEIRKLFLEIQKLKVELQG 52 (65)
T ss_dssp HHHHHHHHHTS------CHHHH-----------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC------cHHHH-----------HHHHHHHHHHHHHHHHHHHHcc
Confidence 46778889998 46654 345555542 4555555544
No 58
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=27.20 E-value=73 Score=30.43 Aligned_cols=63 Identities=10% Similarity=-0.000 Sum_probs=44.5
Q ss_pred CCCcccccCCCcccccCHHHHHhhcC----------CCCCCHHHHHHHHHHhhhcCceeEEEecCCCCCCCHHHH
Q 013140 101 DYSFAKYNKSVDVVKYTDEEYEKYLT----------DPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEEL 165 (449)
Q Consensus 101 ~y~FaKfN~~v~ip~ytdeEY~~~L~----------d~~WT~eETdyLfdLc~~fDLRw~VI~DRy~~~RtvEDL 165 (449)
.||+.. +-...-..||-|+|...|. ..+|...+++||.+.|+++.=||+-|+ -.+...+.++|
T Consensus 40 ~~p~~~-~~~~~~~~~~~e~l~~~m~~~GI~~~Vlvq~~~~~~dN~~ll~~l~~~~~r~~Gva-~vdp~~~~~eL 112 (303)
T 4d9a_A 40 QFPFSP-KAKYLPRDAGPDMLFALRDHLGFARNVIVQASCHGTDNAATLDAIARAQGKARGIA-VVDPAIDEAEL 112 (303)
T ss_dssp TSCCCT-TCSCCBCCBCHHHHHHHHHHHTCSEEEEECCGGGTTCCHHHHHHHHHTTTSEEEEE-CCCTTCCHHHH
T ss_pred cCCCCC-CCCCcCCCCCHHHHHHHHHHcCCCeEEEeccccccccHHHHHHHHHhCCCcEEEEE-EeCCCCCHHHH
Confidence 477764 2222235899999988874 456888899999998889988887776 33444566666
No 59
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=26.41 E-value=22 Score=31.98 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=27.3
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHH
Q 013140 327 KRVEQALQELGVNLKPKVPTKAVCAEHLELRKE 359 (449)
Q Consensus 327 K~Ie~~L~ELgv~~kP~mPT~~Vc~~~~eLr~~ 359 (449)
..+...|.+.||.+-. |.|.+-|..||.|..+
T Consensus 105 p~~~~~L~~~GIgvE~-M~T~aA~rTyNiL~~E 136 (150)
T 3cpk_A 105 PEQVRPLLAMGVGVEA-MDTQAAARTYNILMAE 136 (150)
T ss_dssp HHHHHHHHTTTCEEEE-ECHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCEEEE-eCHHHHHHHHHHHHhC
Confidence 4577889999998765 9999999999999764
No 60
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=22.36 E-value=44 Score=34.16 Aligned_cols=60 Identities=20% Similarity=0.374 Sum_probs=43.1
Q ss_pred ccccCHHH---HHhhcCC--CCCCHHHHHHHHHHhhhcCce-eEEEecCCCCCCCHHHHHHHHH-HHH
Q 013140 113 VVKYTDEE---YEKYLTD--PMWTKEETDQLFELCERFDLR-FIVIADRFPSSRTVEELKDRYY-VSR 173 (449)
Q Consensus 113 ip~ytdeE---Y~~~L~d--~~WT~eETdyLfdLc~~fDLR-w~VI~DRy~~~RtvEDLK~RYY-V~~ 173 (449)
...+|+|| -+++|.. .+||+-+-..++..|..|+-- +--|+.=+++..|+||++ +|+ |.-
T Consensus 104 ~~~LTeEE~~EKe~LL~eGF~~WnrrDF~~FI~a~~kyGR~d~~~IA~ev~~~Kt~eEV~-~Y~~vFw 170 (374)
T 2y9y_A 104 SQPLTEEEEKMKADWESEGFTNWNKLEFRKFITVSGKYGRNSIQAIARELAPGKTLEEVR-AYAKAFW 170 (374)
T ss_dssp CSSSCHHHHHHHHHHHHHCCCCSCHHHHHHHHHHHHHHCTTCHHHHHSSCCCSSSHHHHH-HHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHHhCHhHHHHHHHHHccCCCHHHHH-HHHHHHH
Confidence 44688887 4566654 479999999999999999832 222222223479999999 999 654
Done!