Query 013142
Match_columns 449
No_of_seqs 189 out of 1291
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 00:50:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013142.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013142hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 3E-115 7E-120 871.8 40.7 406 30-442 22-453 (454)
2 PLN02209 serine carboxypeptida 100.0 1E-100 3E-105 775.2 42.7 397 30-439 17-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 3.2E-99 7E-104 765.2 42.2 395 32-439 17-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 2.8E-98 6E-103 766.5 32.5 384 42-436 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 5.1E-93 1.1E-97 728.8 37.3 386 46-439 42-461 (462)
6 PLN02213 sinapoylglucose-malat 100.0 3.9E-70 8.4E-75 536.9 31.4 303 125-439 1-319 (319)
7 KOG1283 Serine carboxypeptidas 100.0 5.2E-67 1.1E-71 484.2 18.6 373 51-435 3-412 (414)
8 COG2939 Carboxypeptidase C (ca 100.0 6.5E-66 1.4E-70 510.0 21.1 380 48-439 73-493 (498)
9 TIGR01250 pro_imino_pep_2 prol 99.4 3.2E-11 7E-16 115.4 23.2 130 52-222 3-132 (288)
10 TIGR03611 RutD pyrimidine util 99.4 1E-11 2.2E-16 117.1 17.3 107 78-223 11-117 (257)
11 TIGR03056 bchO_mg_che_rel puta 99.4 2.5E-11 5.4E-16 116.5 18.2 108 77-223 25-132 (278)
12 PRK00870 haloalkane dehalogena 99.4 1.2E-10 2.6E-15 114.0 23.4 143 31-220 4-149 (302)
13 PLN02824 hydrolase, alpha/beta 99.4 6.2E-11 1.4E-15 115.5 20.6 122 55-221 12-137 (294)
14 PHA02857 monoglyceride lipase; 99.3 6.7E-11 1.4E-15 114.1 18.0 125 62-223 9-134 (276)
15 PRK03204 haloalkane dehalogena 99.3 1.7E-10 3.8E-15 112.2 20.9 123 51-221 14-136 (286)
16 PRK10673 acyl-CoA esterase; Pr 99.3 1.1E-10 2.4E-15 110.9 16.5 104 75-219 11-114 (255)
17 PLN02679 hydrolase, alpha/beta 99.2 1.2E-09 2.6E-14 109.9 21.3 104 79-220 87-190 (360)
18 PRK03592 haloalkane dehalogena 99.2 1.1E-09 2.4E-14 106.7 19.8 115 63-223 16-130 (295)
19 TIGR02240 PHA_depoly_arom poly 99.2 6.1E-10 1.3E-14 107.6 17.3 118 62-222 10-127 (276)
20 PLN02298 hydrolase, alpha/beta 99.2 7.8E-10 1.7E-14 109.7 17.0 140 49-222 30-170 (330)
21 TIGR03343 biphenyl_bphD 2-hydr 99.2 3.5E-09 7.6E-14 102.1 21.1 59 348-435 223-281 (282)
22 TIGR02427 protocat_pcaD 3-oxoa 99.2 1.5E-09 3.3E-14 101.2 18.1 59 348-435 193-251 (251)
23 PLN02578 hydrolase 99.2 2.5E-09 5.4E-14 107.3 20.4 112 63-220 75-186 (354)
24 PRK06489 hypothetical protein; 99.2 5.2E-09 1.1E-13 105.3 22.7 65 339-436 286-356 (360)
25 PF12697 Abhydrolase_6: Alpha/ 99.2 1.9E-10 4.1E-15 105.5 10.7 103 83-223 1-103 (228)
26 PLN02385 hydrolase; alpha/beta 99.1 1.3E-09 2.8E-14 109.1 16.9 128 62-222 70-198 (349)
27 PLN03084 alpha/beta hydrolase 99.1 6.8E-09 1.5E-13 104.8 20.3 131 48-221 101-232 (383)
28 PRK11126 2-succinyl-6-hydroxy- 99.1 4.8E-09 1E-13 98.8 16.3 100 80-220 2-101 (242)
29 PRK10349 carboxylesterase BioH 99.1 1E-08 2.3E-13 97.6 18.7 59 348-435 196-254 (256)
30 PLN02652 hydrolase; alpha/beta 99.1 8.3E-09 1.8E-13 104.7 18.6 127 63-223 120-247 (395)
31 PRK14875 acetoin dehydrogenase 99.0 8.6E-09 1.9E-13 103.6 16.9 103 78-220 129-231 (371)
32 KOG4409 Predicted hydrolase/ac 99.0 4.3E-08 9.4E-13 94.5 19.2 137 48-224 62-198 (365)
33 PLN02894 hydrolase, alpha/beta 99.0 3.7E-08 8E-13 100.5 19.7 109 78-221 103-211 (402)
34 TIGR01738 bioH putative pimelo 99.0 1.3E-08 2.9E-13 94.6 14.7 58 348-434 188-245 (245)
35 TIGR03695 menH_SHCHC 2-succiny 99.0 1.3E-08 2.9E-13 94.6 14.6 105 80-221 1-105 (251)
36 PLN03087 BODYGUARD 1 domain co 98.9 1.4E-07 2.9E-12 97.7 22.4 135 48-220 173-308 (481)
37 TIGR01249 pro_imino_pep_1 prol 98.9 5.9E-08 1.3E-12 95.3 18.9 125 53-222 6-131 (306)
38 PRK10749 lysophospholipase L2; 98.9 8.3E-08 1.8E-12 95.3 20.0 126 62-222 39-167 (330)
39 KOG4178 Soluble epoxide hydrol 98.9 1.2E-07 2.5E-12 91.2 19.1 112 49-196 20-133 (322)
40 PRK08775 homoserine O-acetyltr 98.9 3.7E-08 8.1E-13 98.4 15.5 62 348-437 277-339 (343)
41 PLN02965 Probable pheophorbida 98.9 1.2E-07 2.6E-12 90.5 17.7 60 348-436 193-252 (255)
42 COG1506 DAP2 Dipeptidyl aminop 98.8 5.1E-08 1.1E-12 104.8 15.3 134 61-223 373-509 (620)
43 PLN02511 hydrolase 98.8 4.5E-08 9.8E-13 99.4 13.8 132 53-218 73-207 (388)
44 PLN02980 2-oxoglutarate decarb 98.8 1.1E-07 2.3E-12 112.3 18.0 107 77-220 1368-1479(1655)
45 PRK07581 hypothetical protein; 98.8 2E-07 4.4E-12 92.9 16.9 59 348-435 275-334 (339)
46 PRK00175 metX homoserine O-ace 98.6 3.4E-06 7.4E-11 85.5 20.1 72 338-437 302-374 (379)
47 TIGR01607 PST-A Plasmodium sub 98.6 7.9E-07 1.7E-11 88.4 14.3 62 348-436 270-332 (332)
48 TIGR01392 homoserO_Ac_trn homo 98.6 7.2E-06 1.6E-10 82.2 20.5 63 348-435 288-351 (351)
49 TIGR03100 hydr1_PEP hydrolase, 98.5 5.3E-06 1.2E-10 80.2 17.5 79 126-223 58-136 (274)
50 COG2267 PldB Lysophospholipase 98.5 1E-05 2.2E-10 79.2 17.4 137 51-224 9-145 (298)
51 PF00561 Abhydrolase_1: alpha/ 98.4 2.3E-07 4.9E-12 85.9 5.4 56 347-431 174-229 (230)
52 PRK05855 short chain dehydroge 98.4 9.3E-06 2E-10 86.6 18.0 95 62-187 11-105 (582)
53 PRK05077 frsA fermentation/res 98.4 1E-05 2.2E-10 82.8 17.0 79 126-222 223-301 (414)
54 PLN02211 methyl indole-3-aceta 98.4 2E-05 4.3E-10 76.1 17.8 59 348-436 211-269 (273)
55 PRK10985 putative hydrolase; P 98.4 3.9E-05 8.5E-10 76.0 20.2 46 348-422 255-300 (324)
56 PF00326 Peptidase_S9: Prolyl 98.3 1.5E-05 3.2E-10 73.9 14.9 93 124-227 13-105 (213)
57 KOG1454 Predicted hydrolase/ac 98.3 1.5E-05 3.2E-10 78.9 15.4 61 348-437 264-324 (326)
58 PRK10566 esterase; Provisional 98.3 2.7E-05 5.9E-10 73.7 15.9 62 348-436 186-247 (249)
59 KOG1455 Lysophospholipase [Lip 98.1 0.00016 3.5E-09 69.0 16.7 129 62-221 36-164 (313)
60 PRK06765 homoserine O-acetyltr 98.1 0.00015 3.3E-09 73.6 17.6 65 348-437 323-388 (389)
61 COG0596 MhpC Predicted hydrola 98.0 0.00033 7.2E-09 64.5 16.7 104 80-222 21-124 (282)
62 PF10340 DUF2424: Protein of u 98.0 1.7E-05 3.8E-10 78.6 8.0 132 65-224 105-238 (374)
63 PLN02442 S-formylglutathione h 98.0 0.00088 1.9E-08 65.1 19.4 48 347-419 216-264 (283)
64 PLN02872 triacylglycerol lipas 97.9 7.3E-05 1.6E-09 75.9 11.6 61 348-436 325-388 (395)
65 PRK10115 protease 2; Provision 97.8 0.00079 1.7E-08 73.4 17.5 137 61-225 424-563 (686)
66 PRK11460 putative hydrolase; P 97.6 0.0028 6.1E-08 59.6 16.1 62 348-434 148-209 (232)
67 PRK13604 luxD acyl transferase 97.5 0.0097 2.1E-07 58.0 17.6 66 337-433 194-259 (307)
68 TIGR03101 hydr2_PEP hydrolase, 97.5 0.00084 1.8E-08 64.5 10.2 129 63-225 9-138 (266)
69 TIGR01840 esterase_phb esteras 97.4 0.00079 1.7E-08 62.3 8.9 32 349-380 169-200 (212)
70 PRK11071 esterase YqiA; Provis 97.3 0.0058 1.3E-07 55.6 13.7 54 348-435 136-189 (190)
71 PF12695 Abhydrolase_5: Alpha/ 97.3 0.002 4.3E-08 55.1 9.9 42 348-417 104-145 (145)
72 KOG2564 Predicted acetyltransf 97.3 0.00048 1E-08 64.8 5.8 107 77-217 71-178 (343)
73 KOG2382 Predicted alpha/beta h 97.1 0.0087 1.9E-07 58.0 13.2 90 73-187 45-134 (315)
74 TIGR01838 PHA_synth_I poly(R)- 97.1 0.043 9.3E-07 57.9 19.4 85 126-224 221-305 (532)
75 PF02230 Abhydrolase_2: Phosph 97.1 0.0056 1.2E-07 56.8 11.6 59 348-435 155-213 (216)
76 TIGR01836 PHA_synth_III_C poly 97.0 0.034 7.3E-07 55.7 17.2 61 348-436 286-349 (350)
77 TIGR02821 fghA_ester_D S-formy 96.9 0.0076 1.6E-07 58.2 10.7 51 348-423 211-262 (275)
78 COG3208 GrsT Predicted thioest 96.9 0.0099 2.2E-07 55.3 10.3 59 348-435 176-234 (244)
79 COG3509 LpqC Poly(3-hydroxybut 96.7 0.037 8E-07 52.9 13.4 126 62-221 43-179 (312)
80 KOG1552 Predicted alpha/beta h 96.7 0.015 3.3E-07 54.5 10.7 108 78-223 58-165 (258)
81 PF03583 LIP: Secretory lipase 96.7 0.14 3E-06 49.9 17.8 68 348-441 219-289 (290)
82 cd00707 Pancreat_lipase_like P 96.7 0.0028 6E-08 61.3 5.6 112 78-220 34-146 (275)
83 KOG2100 Dipeptidyl aminopeptid 96.7 0.028 6E-07 62.0 13.7 134 65-224 509-647 (755)
84 PRK05371 x-prolyl-dipeptidyl a 96.6 0.1 2.2E-06 57.7 18.1 87 123-222 277-374 (767)
85 KOG1515 Arylacetamide deacetyl 96.5 0.026 5.7E-07 55.9 11.1 137 62-224 70-210 (336)
86 COG0400 Predicted esterase [Ge 96.3 0.15 3.2E-06 47.0 14.5 59 348-436 146-204 (207)
87 PF08386 Abhydrolase_4: TAP-li 96.3 0.017 3.8E-07 46.9 7.1 65 348-441 34-98 (103)
88 TIGR00976 /NonD putative hydro 96.2 0.046 1E-06 58.3 11.7 128 62-222 5-133 (550)
89 TIGR03230 lipo_lipase lipoprot 96.0 0.021 4.6E-07 58.6 7.6 80 125-219 73-152 (442)
90 PLN00021 chlorophyllase 96.0 0.029 6.2E-07 55.3 8.3 114 77-221 49-166 (313)
91 PRK10162 acetyl esterase; Prov 95.9 0.031 6.7E-07 55.2 8.5 62 157-223 136-197 (318)
92 PF10230 DUF2305: Uncharacteri 95.8 0.072 1.6E-06 51.2 10.1 118 80-223 2-124 (266)
93 COG1647 Esterase/lipase [Gener 95.6 0.32 6.9E-06 44.8 12.8 62 348-436 181-243 (243)
94 KOG1838 Alpha/beta hydrolase [ 95.1 0.21 4.5E-06 50.3 10.9 109 77-220 122-235 (409)
95 PF00975 Thioesterase: Thioest 95.1 0.064 1.4E-06 49.8 6.9 77 125-220 27-103 (229)
96 KOG4391 Predicted alpha/beta h 95.0 0.18 3.8E-06 46.2 9.0 120 65-222 66-185 (300)
97 PF05448 AXE1: Acetyl xylan es 94.7 0.44 9.6E-06 47.1 12.1 53 348-428 262-315 (320)
98 PF06500 DUF1100: Alpha/beta h 94.5 0.026 5.6E-07 57.0 2.8 82 124-223 217-298 (411)
99 PF03096 Ndr: Ndr family; Int 94.2 0.57 1.2E-05 45.1 11.0 93 122-236 52-145 (283)
100 PF07519 Tannase: Tannase and 93.9 3.8 8.1E-05 42.9 17.4 87 339-442 344-432 (474)
101 cd00312 Esterase_lipase Estera 92.8 0.27 5.8E-06 51.5 7.1 35 156-191 157-191 (493)
102 PF10503 Esterase_phd: Esteras 92.4 0.72 1.6E-05 42.9 8.6 27 348-374 169-195 (220)
103 KOG2281 Dipeptidyl aminopeptid 91.4 2.2 4.8E-05 45.2 11.4 109 78-224 640-765 (867)
104 COG0657 Aes Esterase/lipase [L 90.8 2.2 4.8E-05 41.7 10.6 46 174-225 150-195 (312)
105 PLN02454 triacylglycerol lipas 90.6 0.78 1.7E-05 46.5 7.2 68 153-223 206-273 (414)
106 PF05677 DUF818: Chlamydia CHL 90.4 0.86 1.9E-05 44.8 6.9 98 75-201 132-236 (365)
107 PF01764 Lipase_3: Lipase (cla 90.3 0.62 1.3E-05 39.5 5.5 63 154-222 45-107 (140)
108 PF05577 Peptidase_S28: Serine 90.0 0.83 1.8E-05 47.1 7.1 95 126-232 60-159 (434)
109 cd00741 Lipase Lipase. Lipase 89.4 1 2.2E-05 39.0 6.3 59 155-221 10-68 (153)
110 PF07859 Abhydrolase_3: alpha/ 89.2 0.64 1.4E-05 42.4 5.0 63 154-223 47-112 (211)
111 KOG2984 Predicted hydrolase [G 89.1 1.4 3E-05 40.1 6.8 61 348-437 216-276 (277)
112 TIGR03502 lipase_Pla1_cef extr 88.8 1.4 3E-05 48.6 7.9 97 79-194 448-573 (792)
113 cd00519 Lipase_3 Lipase (class 88.4 1.1 2.5E-05 41.7 6.2 60 155-222 110-169 (229)
114 PRK10252 entF enterobactin syn 87.7 3.4 7.3E-05 48.8 10.9 103 80-220 1068-1170(1296)
115 PF11288 DUF3089: Protein of u 86.8 1.1 2.4E-05 41.1 4.9 40 155-200 76-115 (207)
116 COG4099 Predicted peptidase [G 86.6 6.8 0.00015 37.9 10.0 31 159-189 252-282 (387)
117 PRK10439 enterobactin/ferric e 86.4 3.9 8.4E-05 41.9 9.1 35 176-220 288-322 (411)
118 PLN02571 triacylglycerol lipas 85.8 2.7 5.8E-05 42.7 7.4 69 154-223 205-277 (413)
119 PF03283 PAE: Pectinacetyleste 85.4 8.4 0.00018 38.7 10.8 148 64-222 35-198 (361)
120 KOG3975 Uncharacterized conser 85.0 4.6 9.9E-05 38.1 7.9 116 78-216 27-142 (301)
121 PF05728 UPF0227: Uncharacteri 84.8 1.4 3E-05 40.0 4.4 51 161-227 47-97 (187)
122 smart00824 PKS_TE Thioesterase 84.4 4.2 9.1E-05 36.2 7.6 77 124-219 24-100 (212)
123 PF02129 Peptidase_S15: X-Pro 83.8 1.4 3E-05 42.3 4.4 83 126-225 58-140 (272)
124 PF05990 DUF900: Alpha/beta hy 82.8 2.5 5.4E-05 39.7 5.5 67 154-224 74-140 (233)
125 PLN02733 phosphatidylcholine-s 81.4 3.5 7.7E-05 42.6 6.4 36 153-191 142-177 (440)
126 COG2272 PnbA Carboxylesterase 81.2 3.7 8.1E-05 42.4 6.3 30 160-190 165-194 (491)
127 KOG2183 Prolylcarboxypeptidase 80.3 3.9 8.4E-05 41.3 5.9 68 125-199 111-186 (492)
128 PLN02753 triacylglycerol lipas 80.0 5.5 0.00012 41.6 7.1 72 152-223 286-361 (531)
129 KOG2931 Differentiation-relate 79.8 35 0.00077 33.1 11.9 34 406-439 275-308 (326)
130 PF11144 DUF2920: Protein of u 79.6 4.5 9.7E-05 40.9 6.2 61 154-224 161-222 (403)
131 PLN02719 triacylglycerol lipas 78.3 6.7 0.00014 40.9 7.1 71 153-223 273-347 (518)
132 PF08840 BAAT_C: BAAT / Acyl-C 77.2 3.8 8.1E-05 37.9 4.7 46 164-220 10-55 (213)
133 PF06057 VirJ: Bacterial virul 76.0 4.7 0.0001 36.5 4.7 60 151-219 46-105 (192)
134 PF00151 Lipase: Lipase; Inte 75.9 0.76 1.7E-05 45.6 -0.4 104 78-199 69-173 (331)
135 PF08237 PE-PPE: PE-PPE domain 74.4 11 0.00025 35.1 7.0 86 127-220 4-89 (225)
136 KOG4627 Kynurenine formamidase 73.9 2.1 4.6E-05 39.1 1.9 71 136-221 102-172 (270)
137 KOG4667 Predicted esterase [Li 73.7 58 0.0013 30.3 11.0 82 128-222 65-146 (269)
138 PF07819 PGAP1: PGAP1-like pro 73.3 9.1 0.0002 35.7 6.2 64 154-224 61-127 (225)
139 COG2945 Predicted hydrolase of 72.7 7.1 0.00015 35.4 4.9 55 136-201 70-124 (210)
140 PLN02324 triacylglycerol lipas 71.5 14 0.0003 37.7 7.3 70 153-223 193-267 (415)
141 PLN02408 phospholipase A1 71.2 11 0.00024 37.8 6.5 64 154-222 179-242 (365)
142 PLN02761 lipase class 3 family 71.1 14 0.0003 38.7 7.3 70 154-223 269-344 (527)
143 PRK07868 acyl-CoA synthetase; 70.5 7.6 0.00016 44.7 5.9 61 348-437 297-361 (994)
144 PLN02802 triacylglycerol lipas 69.9 11 0.00024 39.3 6.3 65 154-223 309-373 (509)
145 PF11187 DUF2974: Protein of u 69.8 9.9 0.00021 35.5 5.5 53 157-219 69-121 (224)
146 COG0627 Predicted esterase [Ge 69.2 20 0.00042 35.4 7.7 130 79-224 52-190 (316)
147 COG2819 Predicted hydrolase of 68.8 34 0.00074 32.7 8.9 54 156-220 113-171 (264)
148 PRK04940 hypothetical protein; 67.1 14 0.00029 33.3 5.6 38 176-226 60-97 (180)
149 PLN00413 triacylglycerol lipas 67.1 7.2 0.00015 40.3 4.2 39 158-199 269-307 (479)
150 PRK14567 triosephosphate isome 65.4 12 0.00026 35.6 5.2 61 153-224 178-238 (253)
151 PLN02310 triacylglycerol lipas 64.6 16 0.00035 37.1 6.2 64 154-222 186-250 (405)
152 COG4757 Predicted alpha/beta h 64.0 16 0.00034 34.3 5.4 64 126-193 58-122 (281)
153 PLN02847 triacylglycerol lipas 64.0 14 0.00029 39.4 5.6 53 158-218 236-288 (633)
154 KOG4569 Predicted lipase [Lipi 63.6 16 0.00034 36.4 5.9 60 157-222 155-214 (336)
155 PRK14566 triosephosphate isome 62.6 14 0.00031 35.2 5.1 61 153-224 188-248 (260)
156 PF06821 Ser_hydrolase: Serine 62.2 16 0.00034 32.5 5.1 44 348-421 114-157 (171)
157 COG3319 Thioesterase domains o 61.7 77 0.0017 30.2 9.9 59 151-222 46-104 (257)
158 TIGR01839 PHA_synth_II poly(R) 61.7 1.6E+02 0.0035 31.4 13.1 26 348-373 441-466 (560)
159 COG0429 Predicted hydrolase of 61.4 23 0.0005 34.9 6.3 121 63-220 60-185 (345)
160 PF01083 Cutinase: Cutinase; 61.3 9.1 0.0002 34.3 3.4 83 127-223 41-125 (179)
161 PF03403 PAF-AH_p_II: Platelet 60.2 7 0.00015 39.6 2.8 38 177-225 229-266 (379)
162 PF06342 DUF1057: Alpha/beta h 59.7 42 0.0009 32.5 7.6 103 77-220 32-136 (297)
163 PF03959 FSH1: Serine hydrolas 59.7 6.6 0.00014 36.1 2.3 49 348-425 161-209 (212)
164 PLN02934 triacylglycerol lipas 59.3 15 0.00032 38.4 4.8 40 157-199 305-344 (515)
165 PF10142 PhoPQ_related: PhoPQ- 58.7 1.6E+02 0.0034 29.7 12.0 91 295-440 236-327 (367)
166 PF05057 DUF676: Putative seri 58.5 16 0.00034 33.8 4.7 48 152-200 55-102 (217)
167 PLN02162 triacylglycerol lipas 57.9 15 0.00033 37.9 4.6 38 158-198 263-300 (475)
168 KOG2551 Phospholipase/carboxyh 57.8 25 0.00054 32.6 5.6 46 348-423 163-208 (230)
169 KOG2182 Hydrolytic enzymes of 56.9 30 0.00066 35.9 6.6 68 151-228 147-214 (514)
170 PF02450 LCAT: Lecithin:choles 56.9 19 0.00042 36.5 5.3 40 158-201 101-140 (389)
171 PLN03037 lipase class 3 family 56.3 28 0.0006 36.5 6.3 64 155-222 296-360 (525)
172 PF06259 Abhydrolase_8: Alpha/ 56.0 19 0.00042 32.2 4.5 63 124-194 62-127 (177)
173 PF12146 Hydrolase_4: Putative 55.3 46 0.001 25.3 6.0 78 64-164 2-79 (79)
174 COG1073 Hydrolases of the alph 53.4 27 0.00059 32.8 5.5 61 349-436 233-296 (299)
175 COG0218 Predicted GTPase [Gene 53.4 31 0.00067 31.5 5.4 62 77-142 20-85 (200)
176 PLN02429 triosephosphate isome 52.4 25 0.00055 34.5 5.0 60 154-224 239-299 (315)
177 PHA00007 E cell lysis protein 51.1 20 0.00043 27.1 3.1 19 1-19 1-19 (91)
178 PF00756 Esterase: Putative es 49.3 17 0.00036 33.9 3.3 45 169-224 109-153 (251)
179 PF06821 Ser_hydrolase: Serine 48.1 30 0.00064 30.8 4.5 50 161-221 41-91 (171)
180 PF10081 Abhydrolase_9: Alpha/ 48.1 26 0.00056 33.8 4.2 35 153-187 86-120 (289)
181 PF08840 BAAT_C: BAAT / Acyl-C 47.6 26 0.00056 32.3 4.2 48 348-418 115-163 (213)
182 PF01738 DLH: Dienelactone hyd 46.8 88 0.0019 28.4 7.7 57 348-429 145-206 (218)
183 KOG3079 Uridylate kinase/adeny 46.7 11 0.00024 33.8 1.5 16 78-93 5-20 (195)
184 PF05576 Peptidase_S37: PS-10 45.2 84 0.0018 32.1 7.4 88 76-189 59-147 (448)
185 PLN03082 Iron-sulfur cluster a 44.9 24 0.00051 31.2 3.3 63 78-141 76-144 (163)
186 PF06028 DUF915: Alpha/beta hy 44.4 54 0.0012 31.2 5.9 64 347-436 183-254 (255)
187 KOG1553 Predicted alpha/beta h 43.9 63 0.0014 32.1 6.2 57 148-219 287-343 (517)
188 PF12740 Chlorophyllase2: Chlo 43.8 39 0.00084 32.3 4.7 63 151-220 62-130 (259)
189 PF05049 IIGP: Interferon-indu 43.3 20 0.00043 36.2 2.8 59 78-138 32-97 (376)
190 PF14020 DUF4236: Protein of u 42.9 34 0.00073 24.3 3.1 14 128-142 41-54 (55)
191 cd00311 TIM Triosephosphate is 42.1 54 0.0012 31.0 5.4 59 154-224 176-235 (242)
192 COG3571 Predicted hydrolase of 41.6 34 0.00075 30.2 3.6 27 172-198 85-111 (213)
193 PF09292 Neil1-DNA_bind: Endon 41.1 16 0.00035 23.5 1.1 11 81-91 25-35 (39)
194 KOG3724 Negative regulator of 41.0 48 0.001 36.5 5.3 38 151-188 151-194 (973)
195 KOG3101 Esterase D [General fu 40.1 2.3E+02 0.005 26.4 8.7 14 175-188 140-153 (283)
196 PLN02561 triosephosphate isome 39.7 52 0.0011 31.3 4.9 59 154-223 180-239 (253)
197 PF00681 Plectin: Plectin repe 39.2 20 0.00044 24.1 1.6 33 218-250 11-43 (45)
198 TIGR01911 HesB_rel_seleno HesB 39.1 31 0.00068 27.2 2.8 57 82-139 28-89 (92)
199 PRK07868 acyl-CoA synthetase; 39.0 1.1E+02 0.0024 35.3 8.4 20 175-194 140-159 (994)
200 PF03959 FSH1: Serine hydrolas 38.6 28 0.00062 31.9 3.0 124 79-223 3-147 (212)
201 PF07389 DUF1500: Protein of u 37.5 26 0.00057 27.1 2.0 36 157-200 7-42 (100)
202 KOG2369 Lecithin:cholesterol a 37.4 40 0.00086 34.8 3.9 45 153-197 158-203 (473)
203 COG2945 Predicted hydrolase of 37.0 46 0.001 30.3 3.8 56 348-434 149-204 (210)
204 PF08538 DUF1749: Protein of u 36.4 61 0.0013 31.7 4.9 72 151-227 82-154 (303)
205 COG3150 Predicted esterase [Ge 36.2 66 0.0014 28.7 4.5 58 151-228 41-98 (191)
206 COG4782 Uncharacterized protei 35.9 78 0.0017 31.7 5.5 63 155-224 173-237 (377)
207 PRK00042 tpiA triosephosphate 35.8 79 0.0017 30.0 5.5 59 154-224 180-239 (250)
208 PF15240 Pro-rich: Proline-ric 35.8 24 0.00051 31.5 1.8 15 13-27 3-17 (179)
209 KOG3877 NADH:ubiquinone oxidor 35.8 42 0.00091 32.3 3.5 49 122-187 67-115 (393)
210 COG4425 Predicted membrane pro 35.6 49 0.0011 33.9 4.2 35 153-187 374-408 (588)
211 COG3698 Predicted periplasmic 35.4 1.6E+02 0.0035 27.2 7.0 28 78-107 76-106 (250)
212 PRK14565 triosephosphate isome 34.8 59 0.0013 30.6 4.4 53 153-224 173-225 (237)
213 KOG1516 Carboxylesterase and r 34.2 89 0.0019 33.1 6.3 33 160-193 180-212 (545)
214 KOG1643 Triosephosphate isomer 34.0 59 0.0013 29.7 4.0 83 117-224 151-238 (247)
215 PRK11190 Fe/S biogenesis prote 33.8 80 0.0017 28.7 4.9 63 81-144 24-94 (192)
216 PTZ00333 triosephosphate isome 32.0 80 0.0017 30.1 4.9 60 153-223 182-242 (255)
217 PF12273 RCR: Chitin synthesis 31.5 45 0.00098 28.1 2.8 13 98-110 76-88 (130)
218 PF12273 RCR: Chitin synthesis 31.0 25 0.00055 29.6 1.2 11 3-13 1-11 (130)
219 KOG3253 Predicted alpha/beta h 31.0 88 0.0019 33.5 5.2 50 342-419 298-347 (784)
220 PF01555 N6_N4_Mtase: DNA meth 29.4 62 0.0013 29.3 3.7 40 127-169 2-41 (231)
221 TIGR03598 GTPase_YsxC ribosome 28.7 2.7E+02 0.0059 24.2 7.6 62 76-141 13-78 (179)
222 PRK09502 iscA iron-sulfur clus 28.1 77 0.0017 25.6 3.5 64 80-144 24-93 (107)
223 KOG3967 Uncharacterized conser 27.9 1.9E+02 0.0041 26.9 6.2 39 174-220 188-226 (297)
224 TIGR01840 esterase_phb esteras 27.2 85 0.0019 28.4 4.1 117 77-221 10-130 (212)
225 PLN02517 phosphatidylcholine-s 27.2 49 0.0011 35.5 2.7 39 157-195 193-232 (642)
226 PF10503 Esterase_phd: Esteras 27.1 68 0.0015 29.8 3.4 48 163-221 85-132 (220)
227 PF06309 Torsin: Torsin; Inte 25.8 54 0.0012 27.7 2.2 17 77-93 49-65 (127)
228 TIGR02821 fghA_ester_D S-formy 25.7 1.2E+02 0.0026 28.9 5.0 52 162-224 124-176 (275)
229 KOG2541 Palmitoyl protein thio 25.6 2E+02 0.0044 27.6 6.2 92 77-202 21-114 (296)
230 PF15613 WHIM2: WSTF, HB1, Itc 25.3 1.3E+02 0.0028 19.6 3.4 27 65-91 12-38 (38)
231 PRK06762 hypothetical protein; 25.1 41 0.00088 29.2 1.5 12 81-92 2-13 (166)
232 PRK15492 triosephosphate isome 24.6 1.4E+02 0.0031 28.5 5.1 59 154-224 189-248 (260)
233 TIGR03341 YhgI_GntY IscR-regul 24.4 1.6E+02 0.0035 26.7 5.2 63 81-144 23-93 (190)
234 COG3545 Predicted esterase of 23.9 95 0.0021 27.8 3.5 25 349-373 118-142 (181)
235 PF05277 DUF726: Protein of un 23.2 2.5E+02 0.0055 28.0 6.8 58 159-221 204-261 (345)
236 PRK13962 bifunctional phosphog 23.2 1.2E+02 0.0025 33.1 4.7 61 153-224 574-635 (645)
237 KOG4540 Putative lipase essent 23.1 1.1E+02 0.0024 29.6 3.9 19 175-197 275-293 (425)
238 COG5153 CVT17 Putative lipase 23.1 1.1E+02 0.0024 29.6 3.9 19 175-197 275-293 (425)
239 PF01583 APS_kinase: Adenylyls 22.9 48 0.001 29.0 1.5 13 80-92 1-13 (156)
240 PF15253 STIL_N: SCL-interrupt 22.2 1.1E+02 0.0023 31.3 3.9 35 51-88 200-235 (410)
241 PF10605 3HBOH: 3HB-oligomer h 22.1 2.3E+02 0.0049 30.6 6.3 74 347-442 554-643 (690)
242 PRK11524 putative methyltransf 22.1 2.3E+02 0.0049 27.3 6.2 62 124-194 26-89 (284)
243 PRK15188 fimbrial chaperone pr 22.0 4.6E+02 0.01 24.5 7.9 18 7-24 6-23 (228)
244 COG5510 Predicted small secret 21.6 93 0.002 20.9 2.2 24 13-36 7-30 (44)
245 TIGR00419 tim triosephosphate 21.3 1.5E+02 0.0033 27.2 4.5 54 154-223 151-204 (205)
246 KOG3043 Predicted hydrolase re 21.2 2.7E+02 0.0058 26.1 5.9 29 347-375 163-191 (242)
247 PF02421 FeoB_N: Ferrous iron 21.1 1.3E+02 0.0027 26.4 3.7 48 91-141 12-60 (156)
248 PF00809 Pterin_bind: Pterin b 20.8 1.6E+02 0.0035 26.9 4.6 38 129-182 166-203 (210)
249 KOG3847 Phospholipase A2 (plat 20.3 65 0.0014 31.6 1.9 39 177-226 242-280 (399)
250 PF04414 tRNA_deacylase: D-ami 20.3 2.2E+02 0.0048 26.3 5.3 106 81-200 30-152 (213)
251 PF07224 Chlorophyllase: Chlor 20.3 1E+02 0.0022 29.7 3.1 59 154-220 94-156 (307)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-115 Score=871.80 Aligned_cols=406 Identities=46% Similarity=0.854 Sum_probs=369.2
Q ss_pred ccCCCCCccccCCCCCC-CCceeEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCcee
Q 013142 30 AAFPAEDLVVSLPGQPK-VAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYP 108 (449)
Q Consensus 30 ~~~~~~~~v~~lpg~~~-~~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i 108 (449)
...+..++|+.|||.+. +++++|||||+|++..+++|||||+||+++|++|||||||||||||||++ |+|.|+|||++
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v 100 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRV 100 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEE
Confidence 37778899999999984 89999999999998888999999999999999999999999999999995 99999999999
Q ss_pred cCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccc
Q 013142 109 RGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGH 188 (449)
Q Consensus 109 ~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~ 188 (449)
+.+|.+|..||||||+.||||||||||||||||+++.+++.++|+.+|+|+++||++||++||||++|||||+|||||||
T Consensus 101 ~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~ 180 (454)
T KOG1282|consen 101 KYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGH 180 (454)
T ss_pred cCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccce
Confidence 99999999999999999999999999999999999888888899999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcccchhhHHHHHHhccCCChHHHHHHHhcccccccccccCCCCchH
Q 013142 189 YIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNS 268 (449)
Q Consensus 189 yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 268 (449)
|||.||.+|+++|+....+.|||||++||||++|+..+..++.+|++.||+|++++++.+++.|.............+..
T Consensus 181 YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~ 260 (454)
T KOG1282|consen 181 YVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTK 260 (454)
T ss_pred ehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhH
Confidence 99999999999997544578999999999999999999999999999999999999999999999853211112233678
Q ss_pred HHHHHHHHHHhh-h---------c-------------cccCcCCccchhhhhccCcHHHHHHhcCCCCCCCCcccccccc
Q 013142 269 CIEAITEANKIA-T---------K-------------MSVGVDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGV 325 (449)
Q Consensus 269 C~~~~~~~~~~~-~---------~-------------~~~~~~~c~~~~~~~ylN~~~Vk~aL~v~~~~~~~~w~~cs~~ 325 (449)
|..++....... . . .+..+++|..+..++|||+++||+||||+...++ +|+.||+.
T Consensus 261 C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~-~W~~Cn~~ 339 (454)
T KOG1282|consen 261 CNKAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIG-KWERCNDE 339 (454)
T ss_pred HHHHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCC-cccccChh
Confidence 999988765221 0 1 1234678887777899999999999999987554 89999999
Q ss_pred ccccCCCCCCChHHHHHHHHhcC-CcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccC-CeEEEEEEEeC
Q 013142 326 LNYSDTDSNINILPVLKRIIQNG-IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHK-QQVGGWGTEYG 403 (449)
Q Consensus 326 v~~~~~d~~~~~~~~l~~LL~~~-irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~-~~~~G~~k~~~ 403 (449)
+...+.+...++++.+.+++.++ +|||||+||.|++||+.|+++|+++ ++++..++|+||+.+ +|+|||+++|+
T Consensus 340 v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~----L~~~~~~~~~pW~~~~~qvaG~~~~Y~ 415 (454)
T KOG1282|consen 340 VNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKS----LNLSITDEWRPWYHKGGQVAGYTKTYG 415 (454)
T ss_pred hhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHh----ccCccccCccCCccCCCceeeeEEEec
Confidence 97778788889999999999865 9999999999999999999999999 779899999999995 89999999999
Q ss_pred CeEEEEEEcCCcccccccChHHHHHHHHHHhcCCCCCCC
Q 013142 404 NLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRLPNN 442 (449)
Q Consensus 404 n~Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~~~~ 442 (449)
+ |+|++|+|||||||.|||+++++||++||.|+++|+.
T Consensus 416 ~-ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 416 G-LTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred C-EEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 9 9999999999999999999999999999999999864
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.4e-100 Score=775.19 Aligned_cols=397 Identities=27% Similarity=0.550 Sum_probs=335.9
Q ss_pred ccCCCCCccccCCCCC-CCCceeEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCcee
Q 013142 30 AAFPAEDLVVSLPGQP-KVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYP 108 (449)
Q Consensus 30 ~~~~~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i 108 (449)
.+++++++|+.|||+. .+++++||||++|+++.+++||||||||+++|+++||+|||||||||||| .|+|.|+|||++
T Consensus 17 ~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~ 95 (437)
T PLN02209 17 HHVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLAL 95 (437)
T ss_pred ccCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCcee
Confidence 6778889999999984 58899999999998777789999999999999999999999999999999 699999999999
Q ss_pred cCCC-----CceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEec
Q 013142 109 RGDG-----RGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGE 183 (449)
Q Consensus 109 ~~~~-----~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GE 183 (449)
+.++ .++++||+||++.||||||||||||||||+++.... .+++++|+++++||+.||++||+|+++|+||+||
T Consensus 96 ~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GE 174 (437)
T PLN02209 96 KNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGD 174 (437)
T ss_pred ccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEec
Confidence 8653 378999999999999999999999999998765444 3556778999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcccchhhHHHHHHhccCCChHHHHHHHhcccccccccccCC
Q 013142 184 SYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSH 263 (449)
Q Consensus 184 SYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~ 263 (449)
||||||||.+|.+|+++|+...+++||||||+||||++||..|..++++|++.||+|++++++.+++.|...... ..
T Consensus 175 SYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~---~~ 251 (437)
T PLN02209 175 SYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFS---VD 251 (437)
T ss_pred CcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhccccccc---CC
Confidence 999999999999999988654556899999999999999999999999999999999999999999999753110 11
Q ss_pred CCchHHHHHHHHHHHh---hh------ccc------cCcCCccc---hhhhhccCcHHHHHHhcCCCCCCCCcccccccc
Q 013142 264 NMTNSCIEAITEANKI---AT------KMS------VGVDVCMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGV 325 (449)
Q Consensus 264 ~~~~~C~~~~~~~~~~---~~------~~~------~~~~~c~~---~~~~~ylN~~~Vk~aL~v~~~~~~~~w~~cs~~ 325 (449)
..+..|.+++...... .. ..+ .....|.. ..+..|||+++||++|||+.... ..|..|+..
T Consensus 252 ~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~~~~~ 330 (437)
T PLN02209 252 PSNKKCLKLVEEYHKCTDNINSHHTLIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKGSI-GEWIRDHRG 330 (437)
T ss_pred CChHHHHHHHHHHHHHhhcCCccccccccccccccccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCC-CCCccccch
Confidence 3356798877653221 10 011 11234643 24678999999999999985322 479999875
Q ss_pred ccccCCCCCCChHHHHHHHHhcCCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCe
Q 013142 326 LNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNL 405 (449)
Q Consensus 326 v~~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~ 405 (449)
+.+ ..|.+ +..+.+.++|.+++|||||+||.|++||+.|+++|+++ ++|+...+|++|+.+++++||+|+|+|+
T Consensus 331 ~~~-~~d~~-~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~----L~w~~~~~~~~w~~~~q~aG~vk~y~n~ 404 (437)
T PLN02209 331 IPY-KSDIR-SSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKS----LNYSIIDDWRPWMIKGQIAGYTRTYSNK 404 (437)
T ss_pred hhc-ccchh-hhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHh----cCCccCCCeeeeEECCEeeeEEEEeCCc
Confidence 432 23444 34455555566799999999999999999999999999 7787888999999999999999999844
Q ss_pred EEEEEEcCCcccccccChHHHHHHHHHHhcCCCC
Q 013142 406 LTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 439 (449)
Q Consensus 406 Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 439 (449)
|||++|+||||||| +||++|++|+++|+.++++
T Consensus 405 Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 405 MTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred eEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 99999999999998 6999999999999999865
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=3.2e-99 Score=765.23 Aligned_cols=395 Identities=29% Similarity=0.572 Sum_probs=334.3
Q ss_pred CCCCCccccCCCCC-CCCceeEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecC
Q 013142 32 FPAEDLVVSLPGQP-KVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRG 110 (449)
Q Consensus 32 ~~~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~ 110 (449)
+...+.|++|||+. ++++++||||++|+++.+++||||||||+++|+++||||||||||||||+ .|+|+|+|||+++.
T Consensus 17 ~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~ 95 (433)
T PLN03016 17 VDSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKF 95 (433)
T ss_pred ccccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeec
Confidence 35668999999984 57899999999998777789999999999999999999999999999999 69999999999863
Q ss_pred C-----CCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccc
Q 013142 111 D-----GRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESY 185 (449)
Q Consensus 111 ~-----~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESY 185 (449)
+ +.++++||+||++.||||||||||||||||+++.... .+++++|+++++||+.||++||+|+++||||+||||
T Consensus 96 ~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 174 (433)
T PLN03016 96 EVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSY 174 (433)
T ss_pred cccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCc
Confidence 3 3578999999999999999999999999998765543 456667799999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcccchhhHHHHHHhccCCChHHHHHHHhcccccccccccCCCC
Q 013142 186 AGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNM 265 (449)
Q Consensus 186 gG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~ 265 (449)
||||||.+|.+|+++|++..+++||||||+||||+++|..|..++.+|+|.||+|++++++.+++.|..... .....
T Consensus 175 aG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~---~~~~~ 251 (433)
T PLN03016 175 SGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYY---NVDPS 251 (433)
T ss_pred cceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccc---cCCCc
Confidence 999999999999999876556789999999999999999999999999999999999999999999975311 11234
Q ss_pred chHHHHHHHHHHHhhh---------cccc----CcCCccc---hhhhhccCcHHHHHHhcCCCCCCCCcccccccccccc
Q 013142 266 TNSCIEAITEANKIAT---------KMSV----GVDVCMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYS 329 (449)
Q Consensus 266 ~~~C~~~~~~~~~~~~---------~~~~----~~~~c~~---~~~~~ylN~~~Vk~aL~v~~~~~~~~w~~cs~~v~~~ 329 (449)
...|..++........ ..+. ..+.|.. ..+.+|+|+++||++|||+.... .+|..|+..+.+.
T Consensus 252 ~~~C~~~~~~~~~~~~~~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~cn~~v~~~ 330 (433)
T PLN03016 252 NTQCLKLTEEYHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSK-GKWARCNRTIPYN 330 (433)
T ss_pred hHHHHHHHHHHHHHhcCCChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhCCCCCCC-CCCccCCcccccc
Confidence 5679887765432211 1111 0123543 24678999999999999975321 4799999887532
Q ss_pred CCCCCCChHHHHHHHHhcCCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEE
Q 013142 330 DTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFV 409 (449)
Q Consensus 330 ~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~ 409 (449)
.|.+ +..+.+.+++.+++|||||+||.|++||+.|+++|+++ ++|+...+|++|+.+++++||+|+|+|+|||+
T Consensus 331 -~d~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~----L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv 404 (433)
T PLN03016 331 -HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRS----LNYSPIHNWRPWMINNQIAGYTRAYSNKMTFA 404 (433)
T ss_pred -cccc-hhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHh----CCCCCCCCcccccCCCEeeeEEEEeCCceEEE
Confidence 3443 44555566666799999999999999999999999999 78888889999999999999999997559999
Q ss_pred EEcCCcccccccChHHHHHHHHHHhcCCCC
Q 013142 410 TVRGAAHMVPYAQPSRALHLFSSFVHGRRL 439 (449)
Q Consensus 410 ~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 439 (449)
+|++|||||| +||++|++|+++||+++++
T Consensus 405 ~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 405 TIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred EEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 9999999998 7999999999999999865
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=2.8e-98 Score=766.48 Aligned_cols=384 Identities=38% Similarity=0.690 Sum_probs=315.9
Q ss_pred CCCC-CCCceeEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCC-CCceeecc
Q 013142 42 PGQP-KVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGD-GRGLRRNS 119 (449)
Q Consensus 42 pg~~-~~~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~-~~~~~~N~ 119 (449)
||+. .+++++|||||+|+++.+++||||||||+++|+++||||||||||||||| +|+|.|+|||+++.+ ..++++||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 7765 37899999999999778899999999999999999999999999999999 699999999999954 47899999
Q ss_pred CCccCCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHH
Q 013142 120 MSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (449)
Q Consensus 120 ~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (449)
+||+++||||||||||||||||+.....+..+++++|+++++||++|+++||+|+++|+||+||||||||||.+|.+|++
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 99999999999999999999999877767789999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCceeeeeeeEecCCCcCcccchhhHHHHHHhccCCChHHHHHHHhcccccccccccCCCCchHHHHHHHHHHHh
Q 013142 200 HNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKI 279 (449)
Q Consensus 200 ~n~~~~~~~inLkGi~iGng~id~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~ 279 (449)
++.....++||||||+||||++||..|..++.+|++.||+|+++.++.+.+.|.... .+......|..++..+...
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~----~~~~~~~~c~~~~~~~~~~ 235 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACP----QCQKAITECAAALDELSCQ 235 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSH----SSSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccc----cccchhhHHHHHHHhhhhh
Confidence 997655578999999999999999999999999999999999999999999987541 1234567898888776542
Q ss_pred h------hc--------cc-----------cCcCCccchhhhhccCcHHHHHHhcCCCCCCCCccccccccc-c-ccCCC
Q 013142 280 A------TK--------MS-----------VGVDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVL-N-YSDTD 332 (449)
Q Consensus 280 ~------~~--------~~-----------~~~~~c~~~~~~~ylN~~~Vk~aL~v~~~~~~~~w~~cs~~v-~-~~~~d 332 (449)
. .. .+ ...+++.......|||+++||++|||+... ..+|+.|+..+ . ....|
T Consensus 236 ~~~~~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~-~~~w~~~~~~V~~~~~~~d 314 (415)
T PF00450_consen 236 YAISQCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDS-NVNWQSCNDAVNFNWLYDD 314 (415)
T ss_dssp CHHHHHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTT-SSS--SB-HHHHHHCCTCC
T ss_pred cccccccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhCCCccc-CCcccccCccccccccccc
Confidence 0 00 11 011122335678999999999999997321 25899999977 2 23467
Q ss_pred CCCChHHHHHHHHhcCCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCcccccccccc--CCeEEEEEEEeCCeEEEEE
Q 013142 333 SNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFH--KQQVGGWGTEYGNLLTFVT 410 (449)
Q Consensus 333 ~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~--~~~~~G~~k~~~n~Ltf~~ 410 (449)
.+.++.+.+++||++++|||||+||+|++||+.|+++|+++ ++|+...+|+.|.. +++++||+|+++| |||++
T Consensus 315 ~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~----L~w~~~~~f~~~~~~~~~~~~G~~k~~~~-ltf~~ 389 (415)
T PF00450_consen 315 FMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDN----LNWSGKDGFRQWPRKVNGQVAGYVKQYGN-LTFVT 389 (415)
T ss_dssp C-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHC----TECTEEEEEEEEEEETTCSEEEEEEEETT-EEEEE
T ss_pred ccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhc----cccCcccccccccccccccccceeEEecc-EEEEE
Confidence 78999999999999999999999999999999999999999 78888889999987 8999999999999 99999
Q ss_pred EcCCcccccccChHHHHHHHHHHhcC
Q 013142 411 VRGAAHMVPYAQPSRALHLFSSFVHG 436 (449)
Q Consensus 411 V~~AGHmvP~dqP~~a~~mi~~fl~~ 436 (449)
|++||||||+|||+++++||++||+|
T Consensus 390 V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 390 VRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp ETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred EcCCcccChhhCHHHHHHHHHHHhcC
Confidence 99999999999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=5.1e-93 Score=728.77 Aligned_cols=386 Identities=26% Similarity=0.477 Sum_probs=328.0
Q ss_pred CCCceeEEEEEEeeC-CCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccC
Q 013142 46 KVAFRQYAGYVDVDV-KNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK 124 (449)
Q Consensus 46 ~~~~~~~sGyl~v~~-~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~ 124 (449)
+.++++|||||+|++ ..+++||||||||+++|+++||+|||||||||||| +|+|.|+|||+++.++.+++.||+||++
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~ 120 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNN 120 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCccccc
Confidence 467899999999975 45689999999999999999999999999999999 7999999999999888889999999999
Q ss_pred CcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCC
Q 013142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 204 (449)
Q Consensus 125 ~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (449)
.+||||||||+||||||++.. ++..+++++|+|+++||+.|+++||+++.+|+||+||||||+|+|.+|.+|+++|+.+
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~ 199 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKG 199 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcccc
Confidence 999999999999999998653 4566788999999999999999999999999999999999999999999999998765
Q ss_pred CCceeeeeeeEecCCCcCcccchhhHHHHHHh-------ccCCChHHHHHHHh---cccccccccccC--CCCchHHHHH
Q 013142 205 KGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWS-------HGMISDEIGLTIMS---DCDFDDYVSGTS--HNMTNSCIEA 272 (449)
Q Consensus 205 ~~~~inLkGi~iGng~id~~~~~~~~~~~~~~-------~gli~~~~~~~~~~---~c~~~~~~~~~~--~~~~~~C~~~ 272 (449)
++++||||||+|||||+||..|..++.+|+|+ +|+|++++++++.+ .|... ...+.. ......|..+
T Consensus 200 ~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~-~~~c~~~~~~~~~~c~~a 278 (462)
T PTZ00472 200 DGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKK-IKECNSNPDDADSSCSVA 278 (462)
T ss_pred CCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHH-HHhccccCCCcchHHHHH
Confidence 56789999999999999999999999999996 48999999988875 35321 111111 1123456555
Q ss_pred HHHHHHhh-----h-----ccc--cCcCCccc-hhhhhccCcHHHHHHhcCCCCCCCCccccccccccccC-CCCCCChH
Q 013142 273 ITEANKIA-----T-----KMS--VGVDVCMT-LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSD-TDSNINIL 338 (449)
Q Consensus 273 ~~~~~~~~-----~-----~~~--~~~~~c~~-~~~~~ylN~~~Vk~aL~v~~~~~~~~w~~cs~~v~~~~-~d~~~~~~ 338 (449)
...|.... . ++. ...+.|.. ..+.+|||+++||+||||+. ..|+.|+..+...+ .|.+.+..
T Consensus 279 ~~~c~~~~~~~~~~g~n~Ydi~~~c~~~~c~~~~~~~~yLN~~~Vq~AL~v~~----~~w~~c~~~V~~~~~~D~~~~~~ 354 (462)
T PTZ00472 279 RALCNEYIAVYSATGLNNYDIRKPCIGPLCYNMDNTIAFMNREDVQSSLGVKP----ATWQSCNMEVNLMFEMDWMKNFN 354 (462)
T ss_pred HHHHHHHHHHHHhcCCChhheeccCCCCCccCHHHHHHHhCCHHHHHHhCCCC----CCceeCCHHHHHHhhhccccchH
Confidence 54443221 0 011 11234543 45789999999999999973 47999999886555 67788889
Q ss_pred HHHHHHHhcCCcEEEEecCCCccCCchhHHHHHHHHHHhc-CCCcccccccc-ccCCeEEEEEEEeC-----CeEEEEEE
Q 013142 339 PVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDL-NFEVTVPYGAW-FHKQQVGGWGTEYG-----NLLTFVTV 411 (449)
Q Consensus 339 ~~l~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~-~~~~~~~~~~w-~~~~~~~G~~k~~~-----n~Ltf~~V 411 (449)
+.+++||++++|||||+||.|++||+.|+++|+++|+|.. .-..+++|++| ..+++++||+|+++ | |+|++|
T Consensus 355 ~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~-l~~~~V 433 (462)
T PTZ00472 355 YTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSG-FSFVQV 433 (462)
T ss_pred HHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCC-eEEEEE
Confidence 9999999999999999999999999999999999977652 22246889999 56889999999999 8 999999
Q ss_pred cCCcccccccChHHHHHHHHHHhcCCCC
Q 013142 412 RGAAHMVPYAQPSRALHLFSSFVHGRRL 439 (449)
Q Consensus 412 ~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 439 (449)
++||||||.|||+++++|+++|+.++++
T Consensus 434 ~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 434 YNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred CCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999876
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=3.9e-70 Score=536.91 Aligned_cols=303 Identities=26% Similarity=0.509 Sum_probs=249.9
Q ss_pred CcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCC
Q 013142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 204 (449)
Q Consensus 125 ~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (449)
.||||||||||||||||+++...+ .+++++|+|++.||+.||++||+|+++||||+||||||||||.||.+|+++|+..
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765544 4566677999999999999999999999999999999999999999999988765
Q ss_pred CCceeeeeeeEecCCCcCcccchhhHHHHHHhccCCChHHHHHHHhcccccccccccCCCCchHHHHHHHHHHHhhh---
Q 013142 205 KGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIAT--- 281 (449)
Q Consensus 205 ~~~~inLkGi~iGng~id~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~~~--- 281 (449)
++++||||||+|||||++|..+..++.+|+|.||+|++++++.+.+.|..... ........|..++........
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~---~~~~~~~~c~~~~~~~~~~~~~~~ 156 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYY---NVDPSNTQCLKLTEEYHKCTAKIN 156 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCcc---CCCCCcHHHHHHHHHHHHHHhcCC
Confidence 56789999999999999999999999999999999999999999999975321 112345679887664432111
Q ss_pred ------ccccC----cCCccc---hhhhhccCcHHHHHHhcCCCCCCCCccccccccccccCCCCCCChHHHHHHHHhcC
Q 013142 282 ------KMSVG----VDVCMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNG 348 (449)
Q Consensus 282 ------~~~~~----~~~c~~---~~~~~ylN~~~Vk~aL~v~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~~ 348 (449)
..+.. .+.|.. ..+.+|||+++||++|||+... ..+|+.||..+.+. .|.. +..+.+.++|.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~v~~~-~d~~-~~~~~~~~~l~~~ 233 (319)
T PLN02213 157 IHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRTIPYN-HDIV-SSIPYHMNNSISG 233 (319)
T ss_pred HhhcccCcccCccCCCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCcccccc-cccc-cchHHHHHHHhcC
Confidence 11111 124542 2468999999999999997531 14799999887532 3443 4455555566679
Q ss_pred CcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHHH
Q 013142 349 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALH 428 (449)
Q Consensus 349 irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~~ 428 (449)
+|||||+||.|++||+.|+++|+++ ++|+...+|++|+.+++++||+|+|+++|||++|++|||||| +||+++++
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~----L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~ 308 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRS----LNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFI 308 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHh----cCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHH
Confidence 9999999999999999999999999 777788889999999999999999975599999999999998 69999999
Q ss_pred HHHHHhcCCCC
Q 013142 429 LFSSFVHGRRL 439 (449)
Q Consensus 429 mi~~fl~~~~~ 439 (449)
||++||+++++
T Consensus 309 m~~~fi~~~~~ 319 (319)
T PLN02213 309 MFQRWISGQPL 319 (319)
T ss_pred HHHHHHcCCCC
Confidence 99999999764
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.2e-67 Score=484.22 Aligned_cols=373 Identities=26% Similarity=0.403 Sum_probs=299.4
Q ss_pred eEEEEEEeeCCCCeeEEEEEEEecCCC-CCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceE
Q 013142 51 QYAGYVDVDVKNGRSLFYYFVEAEVEP-HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLL 129 (449)
Q Consensus 51 ~~sGyl~v~~~~~~~lFy~f~es~~~~-~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlL 129 (449)
.-+||++|+ .++|+|||+|.+..+- ..+|+.|||+||||+||.++|+|+|+||+..+ +.+|+.+|.+.||||
T Consensus 3 ~~wg~v~vr--~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adll 75 (414)
T KOG1283|consen 3 EDWGYVDVR--TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLL 75 (414)
T ss_pred ccccceeee--cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEE
Confidence 458999997 5689999999886444 68999999999999999999999999999997 668999999999999
Q ss_pred EEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCcee
Q 013142 130 FVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKF 209 (449)
Q Consensus 130 fIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~i 209 (449)
|||.|||+||||.++.+.|+++++++|.|+.+.|+.||..||+|+.+||||+-|||||+..|.+|..+.+..+++ +.+.
T Consensus 76 fvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G-~i~~ 154 (414)
T KOG1283|consen 76 FVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG-EIKL 154 (414)
T ss_pred EecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC-ceee
Confidence 999999999999999998999999999999999999999999999999999999999999999999999988764 4689
Q ss_pred eeeeeEecCCCcCcccchhhHHHHHHhccCCChHHHHHHHh---ccccc----ccccc--cC---C--------------
Q 013142 210 NIKGVAIGNPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMS---DCDFD----DYVSG--TS---H-------------- 263 (449)
Q Consensus 210 nLkGi~iGng~id~~~~~~~~~~~~~~~gli~~~~~~~~~~---~c~~~----~~~~~--~~---~-------------- 263 (449)
|+.|+++|+.||+|.....+..+|+++.+++|+...++... +|... .+... .. +
T Consensus 155 nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYN 234 (414)
T KOG1283|consen 155 NFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYN 234 (414)
T ss_pred cceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceee
Confidence 99999999999999999999999999999999888765542 23220 01000 00 0
Q ss_pred ----CCchHH-HHHH--HHHHHhhhccccC-cCCccchhhhhccCcHHHHHHhcCCCCCCCCccccccccccccC-CCCC
Q 013142 264 ----NMTNSC-IEAI--TEANKIATKMSVG-VDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSD-TDSN 334 (449)
Q Consensus 264 ----~~~~~C-~~~~--~~~~~~~~~~~~~-~~~c~~~~~~~ylN~~~Vk~aL~v~~~~~~~~w~~cs~~v~~~~-~d~~ 334 (449)
...+.. ...+ .+.....+..+.. .-+-..+.+++++|-| ||++|++.+.+ ..|...+..++... .|+|
T Consensus 235 il~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~--~~wGgqsg~vFt~lq~dFM 311 (414)
T KOG1283|consen 235 ILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGG--VKWGGQSGDVFTKLQGDFM 311 (414)
T ss_pred eeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCC--CcccCcCCchHHHhhhhhc
Confidence 000000 0000 0000000111100 1111124577888876 89999998776 48999888775544 8999
Q ss_pred CChHHHHHHHHhcCCcEEEEecCCCccCCchhHHHHHHHHHHhcC-CCccccccccccCCeEEEEEEEeCCeEEEEEEcC
Q 013142 335 INILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLN-FEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG 413 (449)
Q Consensus 335 ~~~~~~l~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~-~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~ 413 (449)
.|.+..+.+||++|++|.||+|++|.||++.|+++|+++|+|+-. -....+|...+.+-..+||.|+|+| |.|..|..
T Consensus 312 KPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktykn-l~f~wilr 390 (414)
T KOG1283|consen 312 KPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKN-LSFFWILR 390 (414)
T ss_pred ccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhcc-ceeEEeec
Confidence 999999999999999999999999999999999999999877621 1123455555567789999999999 99999999
Q ss_pred CcccccccChHHHHHHHHHHhc
Q 013142 414 AAHMVPYAQPSRALHLFSSFVH 435 (449)
Q Consensus 414 AGHmvP~dqP~~a~~mi~~fl~ 435 (449)
||||||.|+|+.|.+|++.+.+
T Consensus 391 aghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 391 AGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred ccCcccCCCHHHHhhheeeccc
Confidence 9999999999999999986643
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-66 Score=510.00 Aligned_cols=380 Identities=26% Similarity=0.413 Sum_probs=293.9
Q ss_pred CceeEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCcee-eccCCccCCc
Q 013142 48 AFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLR-RNSMSWNKAS 126 (449)
Q Consensus 48 ~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~-~N~~sW~~~a 126 (449)
++++|+||.+. . ..+|||+||++++|.++|+||||||||||||+ .|+|+|+||++|+.+..... .||+||++++
T Consensus 73 pv~~~~g~~d~---e-d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a 147 (498)
T COG2939 73 PVRDYTGYPDA---E-DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDFA 147 (498)
T ss_pred chhhccCCccc---c-eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccCC
Confidence 34566666332 1 24999999999999999999999999999999 69999999999997632222 5999999999
Q ss_pred ceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCC--CeEEEecccccccHHHHHHHHHHhccCC
Q 013142 127 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSR--ELFLTGESYAGHYIPQLADVLLDHNAHS 204 (449)
Q Consensus 127 nlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~--~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (449)
||||||||+|||||++. ......+...+.+|++.|++.|++.||++.+. |+||+||||||+|+|.||.+|+++|...
T Consensus 148 dLvFiDqPvGTGfS~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~ 226 (498)
T COG2939 148 DLVFIDQPVGTGFSRAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIAL 226 (498)
T ss_pred ceEEEecCcccCccccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcccc
Confidence 99999999999999973 22334566788999999999999999999877 9999999999999999999999986322
Q ss_pred CCceeeeeeeEecCC-CcCcccchhhHHHHHHhc----cCCChHHHHHHHhcccccc---ccccc-CCCCchHHHHHHHH
Q 013142 205 KGFKFNIKGVAIGNP-LLRLDQDVPAIYEFFWSH----GMISDEIGLTIMSDCDFDD---YVSGT-SHNMTNSCIEAITE 275 (449)
Q Consensus 205 ~~~~inLkGi~iGng-~id~~~~~~~~~~~~~~~----gli~~~~~~~~~~~c~~~~---~~~~~-~~~~~~~C~~~~~~ 275 (449)
+-.+||++++|||| +|+|..++..|..+++.+ +..+.+.++++.+.|+... ..... .......|..+...
T Consensus 227 -~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~ 305 (498)
T COG2939 227 -NGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAY 305 (498)
T ss_pred -CCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHH
Confidence 23799999999999 999999999999999965 4567777888888777631 11111 12344578877766
Q ss_pred HHHhhh----c-------------cccC---cCCccch--hhhhccCcHHHHHHhcCCCCCCCCccccccccccccC---
Q 013142 276 ANKIAT----K-------------MSVG---VDVCMTL--ERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSD--- 330 (449)
Q Consensus 276 ~~~~~~----~-------------~~~~---~~~c~~~--~~~~ylN~~~Vk~aL~v~~~~~~~~w~~cs~~v~~~~--- 330 (449)
+..... + .+.. ...|++. ...+|++...+++.+.... ..|..|+..+...+
T Consensus 306 ~~~~~~~~~~r~~~~~~n~y~~r~~~~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~----d~~~~c~t~a~~~f~~~ 381 (498)
T COG2939 306 LTGLMREYVGRAGGRLLNVYDIREECRDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEV----DNISGCTTDAMTDFLTF 381 (498)
T ss_pred HHhcchhhhccccccccccccchhhcCCCCcccccccceeeccccccccchhccccccc----cchhccchHHHHhhhhh
Confidence 653311 0 1110 1224332 3467888777888876443 37999998764433
Q ss_pred -CCCCCChHHHHHHHHhcCCcEEEEecCCCccCCchhHHHHHHHHHHh--cCCCcccccccccc-CCeEEEEEEEeCCeE
Q 013142 331 -TDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARD--LNFEVTVPYGAWFH-KQQVGGWGTEYGNLL 406 (449)
Q Consensus 331 -~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~--~~~~~~~~~~~w~~-~~~~~G~~k~~~n~L 406 (449)
.+.+.+....+..++.+++.+++|.|+.|.+|++.+++.|..+|+|- .++...+-+--|.. ..+..|-.++++| +
T Consensus 382 ~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n-~ 460 (498)
T COG2939 382 TGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRN-L 460 (498)
T ss_pred cCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccccccCC-c
Confidence 56677888889999999999999999999999999999999998764 34433222222221 4556666667778 9
Q ss_pred EEEEEcCCcccccccChHHHHHHHHHHhcCCCC
Q 013142 407 TFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 439 (449)
Q Consensus 407 tf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 439 (449)
+|+.++.||||||+|+|+.+++|++.|+.+...
T Consensus 461 ~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~~~ 493 (498)
T COG2939 461 TFLRIYEAGHMVPYDRPESSLEMVNLWINGYGA 493 (498)
T ss_pred eEEEEecCcceeecCChHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999988544
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.44 E-value=3.2e-11 Score=115.41 Aligned_cols=130 Identities=23% Similarity=0.301 Sum_probs=77.9
Q ss_pred EEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEE
Q 013142 52 YAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFV 131 (449)
Q Consensus 52 ~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfI 131 (449)
.+++++++ +..+.|.-+. .+...|.||+++||||+++.....+.+. +. + +..+++.+
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~-----------l~-~-----~g~~vi~~ 59 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL-----------LK-E-----EGREVIMY 59 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH-----------HH-h-----cCCEEEEE
Confidence 35566653 2344444332 2234688899999999987532222210 11 1 14789999
Q ss_pred EcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeee
Q 013142 132 ESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNI 211 (449)
Q Consensus 132 DqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inL 211 (449)
|.| |.|.|..........+.+..++++.++++. +..++++|.|+|+||..+..+|. .. +..+
T Consensus 60 d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~----~~------p~~v 121 (288)
T TIGR01250 60 DQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYAL----KY------GQHL 121 (288)
T ss_pred cCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHH----hC------cccc
Confidence 999 999987432221012445566666555542 23456999999999965555553 32 3458
Q ss_pred eeeEecCCCcC
Q 013142 212 KGVAIGNPLLR 222 (449)
Q Consensus 212 kGi~iGng~id 222 (449)
+++++.++...
T Consensus 122 ~~lvl~~~~~~ 132 (288)
T TIGR01250 122 KGLIISSMLDS 132 (288)
T ss_pred ceeeEeccccc
Confidence 89998877543
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.41 E-value=1e-11 Score=117.12 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=72.0
Q ss_pred CCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHH
Q 013142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTAR 157 (449)
Q Consensus 78 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~ 157 (449)
++.|+||+++|.+|.+..+ ..+.+ -+.+..+++.+|.| |.|.|....... .+.++.++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~-~~~~~------------------~l~~~~~vi~~D~~-G~G~S~~~~~~~--~~~~~~~~ 68 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYW-APQLD------------------VLTQRFHVVTYDHR-GTGRSPGELPPG--YSIAHMAD 68 (257)
T ss_pred CCCCEEEEEcCCCcchhHH-HHHHH------------------HHHhccEEEEEcCC-CCCCCCCCCccc--CCHHHHHH
Confidence 4679999999998777663 32221 12345799999999 999997433222 24556677
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 158 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
++.+++.. +...+++|+|+|+||..+..+|.. . +-.++++++.+++..+
T Consensus 69 ~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~----~------~~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 69 DVLQLLDA-------LNIERFHFVGHALGGLIGLQLALR----Y------PERLLSLVLINAWSRP 117 (257)
T ss_pred HHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHH----C------hHHhHHheeecCCCCC
Confidence 77766653 234579999999999666655543 2 1237899988887654
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.38 E-value=2.5e-11 Score=116.46 Aligned_cols=108 Identities=18% Similarity=0.101 Sum_probs=71.0
Q ss_pred CCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhH
Q 013142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTA 156 (449)
Q Consensus 77 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A 156 (449)
+...|+||+++|.+|.+.. +..+.+ . ..+..+++.+|.| |.|.|...... ..+.+..|
T Consensus 25 ~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~-------l~~~~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~ 82 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHS-WRDLMP-----------P-------LARSFRVVAPDLP-GHGFTRAPFRF--RFTLPSMA 82 (278)
T ss_pred CCCCCeEEEEcCCCCCHHH-HHHHHH-----------H-------HhhCcEEEeecCC-CCCCCCCcccc--CCCHHHHH
Confidence 3456899999999877666 232221 0 1224789999999 99998643321 23555667
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 157 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
+++.++++. +..++++|+|+|+||. +|..+.... +..++++++.++...+
T Consensus 83 ~~l~~~i~~-------~~~~~~~lvG~S~Gg~----~a~~~a~~~------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 83 EDLSALCAA-------EGLSPDGVIGHSAGAA----IALRLALDG------PVTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHHH-------cCCCCceEEEECccHH----HHHHHHHhC------CcccceEEEEcCcccc
Confidence 777776653 2345789999999994 444444332 3347899998886654
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.38 E-value=1.2e-10 Score=114.01 Aligned_cols=143 Identities=18% Similarity=0.181 Sum_probs=88.9
Q ss_pred cCCCCCccccCCCCCCCCceeEEEEEEeeCCCCe--eEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCcee
Q 013142 31 AFPAEDLVVSLPGQPKVAFRQYAGYVDVDVKNGR--SLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYP 108 (449)
Q Consensus 31 ~~~~~~~v~~lpg~~~~~~~~~sGyl~v~~~~~~--~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i 108 (449)
.+.++.++.+||.+|. .-.|+.++...+. .++|.-. .++ +.|.||.++|.|+.+..+ ..+.+
T Consensus 4 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~y~~~---G~~-~~~~lvliHG~~~~~~~w-~~~~~------ 67 (302)
T PRK00870 4 LRTPDSRFENLPDYPF-----APHYVDVDDGDGGPLRMHYVDE---GPA-DGPPVLLLHGEPSWSYLY-RKMIP------ 67 (302)
T ss_pred ccCCcccccCCcCCCC-----CceeEeecCCCCceEEEEEEec---CCC-CCCEEEEECCCCCchhhH-HHHHH------
Confidence 4567788888887653 3456888753333 5666521 223 468899999998877763 32221
Q ss_pred cCCCCceeeccCCcc-CCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccc
Q 013142 109 RGDGRGLRRNSMSWN-KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAG 187 (449)
Q Consensus 109 ~~~~~~~~~N~~sW~-~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG 187 (449)
. .. +-.+++.+|.| |.|.|...... ...+.+..|+++.++|+. +...+++|.|+|+||
T Consensus 68 ----------~--L~~~gy~vi~~Dl~-G~G~S~~~~~~-~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg 126 (302)
T PRK00870 68 ----------I--LAAAGHRVIAPDLI-GFGRSDKPTRR-EDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGG 126 (302)
T ss_pred ----------H--HHhCCCEEEEECCC-CCCCCCCCCCc-ccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHH
Confidence 0 11 24789999999 99999532211 112444556666555552 334589999999999
Q ss_pred ccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 188 HYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 188 ~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
..+ ..+.... +-.++++++.++.
T Consensus 127 ~ia----~~~a~~~------p~~v~~lvl~~~~ 149 (302)
T PRK00870 127 LIG----LRLAAEH------PDRFARLVVANTG 149 (302)
T ss_pred HHH----HHHHHhC------hhheeEEEEeCCC
Confidence 544 4444332 2248888887764
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.37 E-value=6.2e-11 Score=115.52 Aligned_cols=122 Identities=16% Similarity=0.093 Sum_probs=79.6
Q ss_pred EEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcC
Q 013142 55 YVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESP 134 (449)
Q Consensus 55 yl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqP 134 (449)
|++++ +.+++|.- . .+ ..|.||.++|.++.|.++ -.+.+ .+.+..+++.+|.|
T Consensus 12 ~~~~~---~~~i~y~~--~--G~-~~~~vlllHG~~~~~~~w-~~~~~------------------~L~~~~~vi~~Dlp 64 (294)
T PLN02824 12 TWRWK---GYNIRYQR--A--GT-SGPALVLVHGFGGNADHW-RKNTP------------------VLAKSHRVYAIDLL 64 (294)
T ss_pred eEEEc---CeEEEEEE--c--CC-CCCeEEEECCCCCChhHH-HHHHH------------------HHHhCCeEEEEcCC
Confidence 56663 44566542 1 11 237899999999988884 43332 13445699999999
Q ss_pred CCccccccCCCCC----CccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceee
Q 013142 135 AGVGWSYSNTTSD----YNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFN 210 (449)
Q Consensus 135 vGtGfSy~~~~~~----~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~in 210 (449)
|.|.|....... ...+.++.|+++.++|... ...+++|.|+|+|| .+|.++.... +-.
T Consensus 65 -G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg----~va~~~a~~~------p~~ 126 (294)
T PLN02824 65 -GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGG----VVGLQAAVDA------PEL 126 (294)
T ss_pred -CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHH----HHHHHHHHhC------hhh
Confidence 999997543211 1235566677777777743 34689999999999 5555544432 234
Q ss_pred eeeeEecCCCc
Q 013142 211 IKGVAIGNPLL 221 (449)
Q Consensus 211 LkGi~iGng~i 221 (449)
++++++.|+..
T Consensus 127 v~~lili~~~~ 137 (294)
T PLN02824 127 VRGVMLINISL 137 (294)
T ss_pred eeEEEEECCCc
Confidence 89999988754
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=99.33 E-value=6.7e-11 Score=114.10 Aligned_cols=125 Identities=14% Similarity=0.155 Sum_probs=81.4
Q ss_pred CCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccC-CcceEEEEcCCCcccc
Q 013142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK-ASNLLFVESPAGVGWS 140 (449)
Q Consensus 62 ~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~-~anlLfIDqPvGtGfS 140 (449)
.|..|+|.+++.. +..+|+||.++|..++|.. +-.+.+ .+.+ -..++-+|.| |.|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~------------------~l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAE------------------NISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHH------------------HHHhCCCEEEEccCC-CCCCC
Confidence 4568999888764 3446999999999776666 222221 1333 3789999999 99999
Q ss_pred ccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 141 YSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 141 y~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
...... ..+-....+|+.+++..+.+.++ ..+++|.|+|+||. +|..+..+. +-+++|+++.+|.
T Consensus 67 ~~~~~~--~~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~----ia~~~a~~~------p~~i~~lil~~p~ 131 (276)
T PHA02857 67 NGEKMM--IDDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGAT----ISILAAYKN------PNLFTAMILMSPL 131 (276)
T ss_pred CCccCC--cCCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHH----HHHHHHHhC------ccccceEEEeccc
Confidence 643211 11223345666666665544443 56899999999994 554444332 2348999999987
Q ss_pred cCc
Q 013142 221 LRL 223 (449)
Q Consensus 221 id~ 223 (449)
+++
T Consensus 132 ~~~ 134 (276)
T PHA02857 132 VNA 134 (276)
T ss_pred ccc
Confidence 664
No 15
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.33 E-value=1.7e-10 Score=112.20 Aligned_cols=123 Identities=16% Similarity=0.241 Sum_probs=74.5
Q ss_pred eEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEE
Q 013142 51 QYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLF 130 (449)
Q Consensus 51 ~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLf 130 (449)
..+.+++++ +..++|- .. . ..|.||.++|.|..+..+ -.+. -.+.+..+++.
T Consensus 14 ~~~~~~~~~---~~~i~y~---~~-G--~~~~iv~lHG~~~~~~~~-~~~~------------------~~l~~~~~vi~ 65 (286)
T PRK03204 14 FESRWFDSS---RGRIHYI---DE-G--TGPPILLCHGNPTWSFLY-RDII------------------VALRDRFRCVA 65 (286)
T ss_pred ccceEEEcC---CcEEEEE---EC-C--CCCEEEEECCCCccHHHH-HHHH------------------HHHhCCcEEEE
Confidence 335677773 3456544 11 1 247889999998554442 2111 01334589999
Q ss_pred EEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceee
Q 013142 131 VESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFN 210 (449)
Q Consensus 131 IDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~in 210 (449)
+|.| |.|.|.... ....+.+..|+++.++++ .. ...+++|+|+|+|| .+|..+.... +-.
T Consensus 66 ~D~~-G~G~S~~~~--~~~~~~~~~~~~~~~~~~----~~---~~~~~~lvG~S~Gg----~va~~~a~~~------p~~ 125 (286)
T PRK03204 66 PDYL-GFGLSERPS--GFGYQIDEHARVIGEFVD----HL---GLDRYLSMGQDWGG----PISMAVAVER------ADR 125 (286)
T ss_pred ECCC-CCCCCCCCC--ccccCHHHHHHHHHHHHH----Hh---CCCCEEEEEECccH----HHHHHHHHhC------hhh
Confidence 9999 999985322 111233445555555554 32 34579999999999 5565555432 345
Q ss_pred eeeeEecCCCc
Q 013142 211 IKGVAIGNPLL 221 (449)
Q Consensus 211 LkGi~iGng~i 221 (449)
++++++.++..
T Consensus 126 v~~lvl~~~~~ 136 (286)
T PRK03204 126 VRGVVLGNTWF 136 (286)
T ss_pred eeEEEEECccc
Confidence 88999988754
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.29 E-value=1.1e-10 Score=110.86 Aligned_cols=104 Identities=14% Similarity=0.156 Sum_probs=73.1
Q ss_pred CCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchh
Q 013142 75 VEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDAS 154 (449)
Q Consensus 75 ~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~ 154 (449)
.++.+.|.||+++|.+|.+.. ...+.+ .+.+..+++.+|+| |.|.|.... . .+.++
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D~~-G~G~s~~~~--~--~~~~~ 66 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLAR------------------DLVNDHDIIQVDMR-NHGLSPRDP--V--MNYPA 66 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHH------------------HHhhCCeEEEECCC-CCCCCCCCC--C--CCHHH
Confidence 456678999999999988877 343331 02345799999999 999986422 2 25566
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCC
Q 013142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (449)
Q Consensus 155 ~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng 219 (449)
.++|+.++|..+ ...+++|.|+|+||..+..+|.+ . +-.++++++.++
T Consensus 67 ~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~----~------~~~v~~lvli~~ 114 (255)
T PRK10673 67 MAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTAL----A------PDRIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHh----C------HhhcceEEEEec
Confidence 788888888743 33579999999999666655543 2 233788888653
No 17
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.23 E-value=1.2e-09 Score=109.90 Aligned_cols=104 Identities=13% Similarity=0.066 Sum_probs=67.6
Q ss_pred CCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHHH
Q 013142 79 EKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARD 158 (449)
Q Consensus 79 ~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d 158 (449)
+.|.||.++|.++.+..+ ..+.+ ...+...++.+|.| |.|.|...... ..+.+..|++
T Consensus 87 ~gp~lvllHG~~~~~~~w-~~~~~------------------~L~~~~~via~Dl~-G~G~S~~~~~~--~~~~~~~a~~ 144 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHW-RRNIG------------------VLAKNYTVYAIDLL-GFGASDKPPGF--SYTMETWAEL 144 (360)
T ss_pred CCCeEEEECCCCCCHHHH-HHHHH------------------HHhcCCEEEEECCC-CCCCCCCCCCc--cccHHHHHHH
Confidence 347889999998887773 32221 12345789999999 99999543221 2245567777
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 159 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 159 ~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
+.++|.. +...+++|.|+|+|| .+|..+..... +-.++|+++.|+.
T Consensus 145 l~~~l~~-------l~~~~~~lvGhS~Gg----~ia~~~a~~~~-----P~rV~~LVLi~~~ 190 (360)
T PLN02679 145 ILDFLEE-------VVQKPTVLIGNSVGS----LACVIAASEST-----RDLVRGLVLLNCA 190 (360)
T ss_pred HHHHHHH-------hcCCCeEEEEECHHH----HHHHHHHHhcC-----hhhcCEEEEECCc
Confidence 7777763 234589999999999 44444332110 2238899988764
No 18
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.21 E-value=1.1e-09 Score=106.71 Aligned_cols=115 Identities=18% Similarity=0.221 Sum_probs=75.9
Q ss_pred CeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCcccccc
Q 013142 63 GRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYS 142 (449)
Q Consensus 63 ~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~ 142 (449)
+..++|.-. . +.|.||.++|.|+.+..+ -.+.+ .+.+...++-+|.| |.|.|..
T Consensus 16 g~~i~y~~~--G----~g~~vvllHG~~~~~~~w-~~~~~------------------~L~~~~~via~D~~-G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIET--G----EGDPIVFLHGNPTSSYLW-RNIIP------------------HLAGLGRCLAPDLI-GMGASDK 69 (295)
T ss_pred CEEEEEEEe--C----CCCEEEEECCCCCCHHHH-HHHHH------------------HHhhCCEEEEEcCC-CCCCCCC
Confidence 455666522 1 347899999999888774 33221 13334589999999 9999964
Q ss_pred CCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 143 NTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 143 ~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
... . .+.+..|+|+.++++. +...+++|.|+|.||..+-.+| ... +-.++++++.|+...
T Consensus 70 ~~~-~--~~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a----~~~------p~~v~~lil~~~~~~ 129 (295)
T PRK03592 70 PDI-D--YTFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWA----ARH------PDRVRGIAFMEAIVR 129 (295)
T ss_pred CCC-C--CCHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHH----HhC------hhheeEEEEECCCCC
Confidence 322 2 2556677777777764 2346899999999995444444 332 234899999998554
Q ss_pred c
Q 013142 223 L 223 (449)
Q Consensus 223 ~ 223 (449)
+
T Consensus 130 ~ 130 (295)
T PRK03592 130 P 130 (295)
T ss_pred C
Confidence 4
No 19
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.21 E-value=6.1e-10 Score=107.57 Aligned_cols=118 Identities=16% Similarity=0.123 Sum_probs=75.5
Q ss_pred CCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccc
Q 013142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (449)
Q Consensus 62 ~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy 141 (449)
++..+.|+..+. + ...|.||+++|-++.+..+ ..+.+ . ..+..+++.+|.| |.|.|-
T Consensus 10 ~~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w-~~~~~----------------~--L~~~~~vi~~Dl~-G~G~S~ 66 (276)
T TIGR02240 10 DGQSIRTAVRPG--K-EGLTPLLIFNGIGANLELV-FPFIE----------------A--LDPDLEVIAFDVP-GVGGSS 66 (276)
T ss_pred CCcEEEEEEecC--C-CCCCcEEEEeCCCcchHHH-HHHHH----------------H--hccCceEEEECCC-CCCCCC
Confidence 345677875432 2 2346789999876666653 32221 0 2245799999999 999996
Q ss_pred cCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 142 SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 142 ~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
... .. .+.+..++++.++|... .-.+++|+|+|+|| .+|.++..+. +-.++++++.|+..
T Consensus 67 ~~~-~~--~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG----~va~~~a~~~------p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 67 TPR-HP--YRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGG----ALAQQFAHDY------PERCKKLILAATAA 126 (276)
T ss_pred CCC-Cc--CcHHHHHHHHHHHHHHh-------CcCceEEEEECHHH----HHHHHHHHHC------HHHhhheEEeccCC
Confidence 322 11 24445666666666642 23579999999999 5555555543 23489999988765
Q ss_pred C
Q 013142 222 R 222 (449)
Q Consensus 222 d 222 (449)
.
T Consensus 127 ~ 127 (276)
T TIGR02240 127 G 127 (276)
T ss_pred c
Confidence 4
No 20
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.18 E-value=7.8e-10 Score=109.74 Aligned_cols=140 Identities=18% Similarity=0.196 Sum_probs=86.2
Q ss_pred ceeEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccC-Ccc
Q 013142 49 FRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK-ASN 127 (449)
Q Consensus 49 ~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~-~an 127 (449)
.+...+++... .|..++|+.+........+|+||+++|..+.++- . +.+ + -..+++ -.+
T Consensus 30 ~~~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~--~-~~~------------~---~~~L~~~Gy~ 89 (330)
T PLN02298 30 IKGSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISW--T-FQS------------T---AIFLAQMGFA 89 (330)
T ss_pred CccccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcce--e-hhH------------H---HHHHHhCCCE
Confidence 34557777664 4567888655332222356899999999433321 1 000 0 011333 489
Q ss_pred eEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCc
Q 013142 128 LLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGF 207 (449)
Q Consensus 128 lLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~ 207 (449)
|+.+|+| |.|.|.... .+..+.+..++|+.++++..... .++...+++|+|+|+||. +|..+..++
T Consensus 90 V~~~D~r-GhG~S~~~~--~~~~~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~----ia~~~a~~~------ 155 (330)
T PLN02298 90 CFALDLE-GHGRSEGLR--AYVPNVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGA----ICLLIHLAN------ 155 (330)
T ss_pred EEEecCC-CCCCCCCcc--ccCCCHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhH----HHHHHHhcC------
Confidence 9999999 999985321 22234556788888888755432 223345799999999994 444433332
Q ss_pred eeeeeeeEecCCCcC
Q 013142 208 KFNIKGVAIGNPLLR 222 (449)
Q Consensus 208 ~inLkGi~iGng~id 222 (449)
+-.++|+++.+++.+
T Consensus 156 p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 156 PEGFDGAVLVAPMCK 170 (330)
T ss_pred cccceeEEEeccccc
Confidence 234899999888754
No 21
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.18 E-value=3.5e-09 Score=102.15 Aligned_cols=59 Identities=17% Similarity=0.231 Sum_probs=50.5
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
.++||++.|..|.+++...++.+.+.+ .+ .+++.|++|||+++.++|+...
T Consensus 223 ~~Pvlli~G~~D~~v~~~~~~~~~~~~----------------------------~~-~~~~~i~~agH~~~~e~p~~~~ 273 (282)
T TIGR03343 223 KAKTLVTWGRDDRFVPLDHGLKLLWNM----------------------------PD-AQLHVFSRCGHWAQWEHADAFN 273 (282)
T ss_pred CCCEEEEEccCCCcCCchhHHHHHHhC----------------------------CC-CEEEEeCCCCcCCcccCHHHHH
Confidence 789999999999999976666555541 15 7778999999999999999999
Q ss_pred HHHHHHhc
Q 013142 428 HLFSSFVH 435 (449)
Q Consensus 428 ~mi~~fl~ 435 (449)
++|.+|+.
T Consensus 274 ~~i~~fl~ 281 (282)
T TIGR03343 274 RLVIDFLR 281 (282)
T ss_pred HHHHHHhh
Confidence 99999985
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.18 E-value=1.5e-09 Score=101.24 Aligned_cols=59 Identities=25% Similarity=0.389 Sum_probs=49.9
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
..+|++.+|+.|.++|....+.+.+. ..+ .++.++.++||+++.++|+...
T Consensus 193 ~~Pvlii~g~~D~~~~~~~~~~~~~~----------------------------~~~-~~~~~~~~~gH~~~~~~p~~~~ 243 (251)
T TIGR02427 193 AVPTLCIAGDQDGSTPPELVREIADL----------------------------VPG-ARFAEIRGAGHIPCVEQPEAFN 243 (251)
T ss_pred CCCeEEEEeccCCcCChHHHHHHHHh----------------------------CCC-ceEEEECCCCCcccccChHHHH
Confidence 69999999999999998766655544 124 6778899999999999999999
Q ss_pred HHHHHHhc
Q 013142 428 HLFSSFVH 435 (449)
Q Consensus 428 ~mi~~fl~ 435 (449)
+.+++|+.
T Consensus 244 ~~i~~fl~ 251 (251)
T TIGR02427 244 AALRDFLR 251 (251)
T ss_pred HHHHHHhC
Confidence 99999973
No 23
>PLN02578 hydrolase
Probab=99.17 E-value=2.5e-09 Score=107.35 Aligned_cols=112 Identities=17% Similarity=0.118 Sum_probs=70.6
Q ss_pred CeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCcccccc
Q 013142 63 GRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYS 142 (449)
Q Consensus 63 ~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~ 142 (449)
+.++.|.-.+ +.|-||.++|-++.+..+ ....+ ...+..+++.+|.| |.|.|..
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~w-~~~~~------------------~l~~~~~v~~~D~~-G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFHW-RYNIP------------------ELAKKYKVYALDLL-GFGWSDK 128 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHHH-HHHHH------------------HHhcCCEEEEECCC-CCCCCCC
Confidence 4567765221 235578999876654442 22111 02345889999999 9999864
Q ss_pred CCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 143 NTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 143 ~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
.. .. .+.+..++++.+|++.. ...+++|.|+|+|| .+|..+..+. +-.++++++.|+.
T Consensus 129 ~~-~~--~~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg----~ia~~~A~~~------p~~v~~lvLv~~~ 186 (354)
T PLN02578 129 AL-IE--YDAMVWRDQVADFVKEV-------VKEPAVLVGNSLGG----FTALSTAVGY------PELVAGVALLNSA 186 (354)
T ss_pred cc-cc--cCHHHHHHHHHHHHHHh-------ccCCeEEEEECHHH----HHHHHHHHhC------hHhcceEEEECCC
Confidence 32 12 24455677777777743 24689999999999 4555554443 2348899987763
No 24
>PRK06489 hypothetical protein; Provisional
Probab=99.17 E-value=5.2e-09 Score=105.29 Aligned_cols=65 Identities=15% Similarity=0.224 Sum_probs=49.6
Q ss_pred HHHHHHHhcCCcEEEEecCCCccCCchhH--HHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCC--
Q 013142 339 PVLKRIIQNGIPVWVFSGDQDSVVPLLGS--RTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGA-- 414 (449)
Q Consensus 339 ~~l~~LL~~~irVLiy~Gd~D~i~~~~g~--~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~A-- 414 (449)
..+++| ..+|||++|+.|.++|.... +...+. ..+ -++++|.+|
T Consensus 286 ~~L~~I---~~PvLvI~G~~D~~~p~~~~~~~~la~~----------------------------ip~-a~l~~i~~a~~ 333 (360)
T PRK06489 286 PDLEKI---KAPVLAINSADDERNPPETGVMEAALKR----------------------------VKH-GRLVLIPASPE 333 (360)
T ss_pred HHHHhC---CCCEEEEecCCCcccChhhHHHHHHHHh----------------------------CcC-CeEEEECCCCC
Confidence 344444 79999999999999987654 333232 114 677999996
Q ss_pred --cccccccChHHHHHHHHHHhcC
Q 013142 415 --AHMVPYAQPSRALHLFSSFVHG 436 (449)
Q Consensus 415 --GHmvP~dqP~~a~~mi~~fl~~ 436 (449)
||++. ++|+...+.|.+|+..
T Consensus 334 ~~GH~~~-e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 334 TRGHGTT-GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred CCCcccc-cCHHHHHHHHHHHHHh
Confidence 99986 8999999999999964
No 25
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.16 E-value=1.9e-10 Score=105.50 Aligned_cols=103 Identities=20% Similarity=0.271 Sum_probs=67.0
Q ss_pred eEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHH
Q 013142 83 TLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVF 162 (449)
Q Consensus 83 ilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~f 162 (449)
||.++|.++.+.. +..+.+ . +.+..+++.+|.| |.|.|..... ....+-++.++++.++
T Consensus 1 vv~~hG~~~~~~~-~~~~~~----------------~--l~~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~l~~~ 59 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE----------------A--LARGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAEDLAEL 59 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH----------------H--HHTTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH----------------H--HhCCCEEEEEecC-Cccccccccc-cCCcchhhhhhhhhhc
Confidence 6899999888876 333332 1 1257789999999 9999975432 1122444556666665
Q ss_pred HHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 163 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 163 L~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
|+ .. ..++++|.|+|+||..+-.++ .+. +-.++|+++.++....
T Consensus 60 l~----~~---~~~~~~lvG~S~Gg~~a~~~a----~~~------p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 60 LD----AL---GIKKVILVGHSMGGMIALRLA----ARY------PDRVKGLVLLSPPPPL 103 (228)
T ss_dssp HH----HT---TTSSEEEEEETHHHHHHHHHH----HHS------GGGEEEEEEESESSSH
T ss_pred cc----cc---ccccccccccccccccccccc----ccc------ccccccceeecccccc
Confidence 55 33 236899999999995544444 432 2259999998887654
No 26
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.15 E-value=1.3e-09 Score=109.12 Aligned_cols=128 Identities=17% Similarity=0.169 Sum_probs=80.9
Q ss_pred CCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccC-CcceEEEEcCCCcccc
Q 013142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNK-ASNLLFVESPAGVGWS 140 (449)
Q Consensus 62 ~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~-~anlLfIDqPvGtGfS 140 (449)
.|..+|+..+... +.+.+|+||.++|..+.++...-.+. ..+.+ -.+++-+|.| |.|.|
T Consensus 70 ~g~~l~~~~~~p~-~~~~~~~iv~lHG~~~~~~~~~~~~~------------------~~l~~~g~~v~~~D~~-G~G~S 129 (349)
T PLN02385 70 RGVEIFSKSWLPE-NSRPKAAVCFCHGYGDTCTFFFEGIA------------------RKIASSGYGVFAMDYP-GFGLS 129 (349)
T ss_pred CCCEEEEEEEecC-CCCCCeEEEEECCCCCccchHHHHHH------------------HHHHhCCCEEEEecCC-CCCCC
Confidence 4567888655432 22457999999998665543111111 01332 4789999999 99999
Q ss_pred ccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 141 YSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 141 y~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
.... .+..+-+..++|+.++++.. ...+++...+++|+|+|+|| .+|..+..+. +-.++|+++.+|.
T Consensus 130 ~~~~--~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG----~val~~a~~~------p~~v~glVLi~p~ 196 (349)
T PLN02385 130 EGLH--GYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGG----AVALKVHLKQ------PNAWDGAILVAPM 196 (349)
T ss_pred CCCC--CCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccch----HHHHHHHHhC------cchhhheeEeccc
Confidence 6432 22234456777887777653 22334555689999999999 5555554443 2347899998876
Q ss_pred cC
Q 013142 221 LR 222 (449)
Q Consensus 221 id 222 (449)
..
T Consensus 197 ~~ 198 (349)
T PLN02385 197 CK 198 (349)
T ss_pred cc
Confidence 43
No 27
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.11 E-value=6.8e-09 Score=104.85 Aligned_cols=131 Identities=16% Similarity=0.136 Sum_probs=80.9
Q ss_pred CceeEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcc
Q 013142 48 AFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASN 127 (449)
Q Consensus 48 ~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~an 127 (449)
+.++-+++... ..+-.+||. + ..+...|.||.++|.|+.+..+ -.+.+ . ..+..+
T Consensus 101 ~~~~~~~~~~~--~~~~~~~y~--~--~G~~~~~~ivllHG~~~~~~~w-~~~~~----------------~--L~~~~~ 155 (383)
T PLN03084 101 GLKMGAQSQAS--SDLFRWFCV--E--SGSNNNPPVLLIHGFPSQAYSY-RKVLP----------------V--LSKNYH 155 (383)
T ss_pred cccccceeEEc--CCceEEEEE--e--cCCCCCCeEEEECCCCCCHHHH-HHHHH----------------H--HhcCCE
Confidence 34444555442 233445544 2 2334568999999998877663 32221 1 234579
Q ss_pred eEEEEcCCCccccccCCCC-CCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCC
Q 013142 128 LLFVESPAGVGWSYSNTTS-DYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKG 206 (449)
Q Consensus 128 lLfIDqPvGtGfSy~~~~~-~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 206 (449)
++-+|.| |.|+|...... ....+.++.++++.+++++. ...+++|+|+|+|| .+|..+..+.
T Consensus 156 Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG----~ia~~~a~~~----- 218 (383)
T PLN03084 156 AIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFS----PPVVKYASAH----- 218 (383)
T ss_pred EEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHH----HHHHHHHHhC-----
Confidence 9999999 99999743221 11234556667777666642 34579999999999 4555554443
Q ss_pred ceeeeeeeEecCCCc
Q 013142 207 FKFNIKGVAIGNPLL 221 (449)
Q Consensus 207 ~~inLkGi~iGng~i 221 (449)
+-.++++++.|+..
T Consensus 219 -P~~v~~lILi~~~~ 232 (383)
T PLN03084 219 -PDKIKKLILLNPPL 232 (383)
T ss_pred -hHhhcEEEEECCCC
Confidence 23488999988764
No 28
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.07 E-value=4.8e-09 Score=98.81 Aligned_cols=100 Identities=18% Similarity=0.220 Sum_probs=66.9
Q ss_pred CCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHHHH
Q 013142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (449)
Q Consensus 80 ~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~ 159 (449)
.|.||+++|.+|++..+ -.+. ... +..+++.+|.| |.|.|..... .+-++.|+++
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~----------------~~l---~~~~vi~~D~~-G~G~S~~~~~----~~~~~~~~~l 56 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVG----------------EAL---PDYPRLYIDLP-GHGGSAAISV----DGFADVSRLL 56 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHH----------------HHc---CCCCEEEecCC-CCCCCCCccc----cCHHHHHHHH
Confidence 58899999999988773 3322 111 24899999999 9999963221 1445566666
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 160 ~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
.++|.. +...+++++|+|+|| .+|..+..+.. .-.++++++.++.
T Consensus 57 ~~~l~~-------~~~~~~~lvG~S~Gg----~va~~~a~~~~-----~~~v~~lvl~~~~ 101 (242)
T PRK11126 57 SQTLQS-------YNILPYWLVGYSLGG----RIAMYYACQGL-----AGGLCGLIVEGGN 101 (242)
T ss_pred HHHHHH-------cCCCCeEEEEECHHH----HHHHHHHHhCC-----cccccEEEEeCCC
Confidence 666653 335689999999999 55555544431 1127888887654
No 29
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.07 E-value=1e-08 Score=97.61 Aligned_cols=59 Identities=20% Similarity=0.219 Sum_probs=49.2
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
.++|||+.|..|.++|....+...+. ..+ ..+++++++||+++.++|+...
T Consensus 196 ~~P~lii~G~~D~~~~~~~~~~~~~~----------------------------i~~-~~~~~i~~~gH~~~~e~p~~f~ 246 (256)
T PRK10349 196 SMPFLRLYGYLDGLVPRKVVPMLDKL----------------------------WPH-SESYIFAKAAHAPFISHPAEFC 246 (256)
T ss_pred CCCeEEEecCCCccCCHHHHHHHHHh----------------------------CCC-CeEEEeCCCCCCccccCHHHHH
Confidence 79999999999999987665543333 125 7789999999999999999999
Q ss_pred HHHHHHhc
Q 013142 428 HLFSSFVH 435 (449)
Q Consensus 428 ~mi~~fl~ 435 (449)
+.+.+|-+
T Consensus 247 ~~l~~~~~ 254 (256)
T PRK10349 247 HLLVALKQ 254 (256)
T ss_pred HHHHHHhc
Confidence 99999864
No 30
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.06 E-value=8.3e-09 Score=104.75 Aligned_cols=127 Identities=17% Similarity=0.153 Sum_probs=83.0
Q ss_pred CeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCcc-CCcceEEEEcCCCccccc
Q 013142 63 GRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGVGWSY 141 (449)
Q Consensus 63 ~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~-~~anlLfIDqPvGtGfSy 141 (449)
+..+|++.++... .+.+|+||+++|.++.+.. +-.+.+ . +. +-.+++-+|.| |.|.|.
T Consensus 120 ~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~-~~~~a~----------------~--L~~~Gy~V~~~D~r-GhG~S~ 178 (395)
T PLN02652 120 RNALFCRSWAPAA-GEMRGILIIIHGLNEHSGR-YLHFAK----------------Q--LTSCGFGVYAMDWI-GHGGSD 178 (395)
T ss_pred CCEEEEEEecCCC-CCCceEEEEECCchHHHHH-HHHHHH----------------H--HHHCCCEEEEeCCC-CCCCCC
Confidence 3577777665532 3457899999999776654 222221 0 21 34689999999 999986
Q ss_pred cCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 142 SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 142 ~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
... .+..+.+..++|+.++++..-..+| ..+++|+|+|+||..+ .....+.+. .-.++|+++.+|++
T Consensus 179 ~~~--~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ia----l~~a~~p~~----~~~v~glVL~sP~l 245 (395)
T PLN02652 179 GLH--GYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVV----LKAASYPSI----EDKLEGIVLTSPAL 245 (395)
T ss_pred CCC--CCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHH----HHHHhccCc----ccccceEEEECccc
Confidence 432 2333455667888888887766665 3589999999999443 333332210 23488999988876
Q ss_pred Cc
Q 013142 222 RL 223 (449)
Q Consensus 222 d~ 223 (449)
..
T Consensus 246 ~~ 247 (395)
T PLN02652 246 RV 247 (395)
T ss_pred cc
Confidence 53
No 31
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.03 E-value=8.6e-09 Score=103.64 Aligned_cols=103 Identities=15% Similarity=0.108 Sum_probs=65.6
Q ss_pred CCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHH
Q 013142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTAR 157 (449)
Q Consensus 78 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~ 157 (449)
.+.|.+|+++|.+|++.. +..+.+ . ..+..+++-+|.| |.|.|..... ..+.++.++
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~~~~~-----------~-------l~~~~~v~~~d~~-g~G~s~~~~~---~~~~~~~~~ 185 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WLFNHA-----------A-------LAAGRPVIALDLP-GHGASSKAVG---AGSLDELAA 185 (371)
T ss_pred CCCCeEEEECCCCCccch-HHHHHH-----------H-------HhcCCEEEEEcCC-CCCCCCCCCC---CCCHHHHHH
Confidence 456889999999888776 333322 0 1223789999999 9999843211 124445555
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 158 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
++.++++ . +...+++|.|+|+||..+..+|.. + +-.++++++.++.
T Consensus 186 ~~~~~~~----~---~~~~~~~lvG~S~Gg~~a~~~a~~----~------~~~v~~lv~~~~~ 231 (371)
T PRK14875 186 AVLAFLD----A---LGIERAHLVGHSMGGAVALRLAAR----A------PQRVASLTLIAPA 231 (371)
T ss_pred HHHHHHH----h---cCCccEEEEeechHHHHHHHHHHh----C------chheeEEEEECcC
Confidence 5555554 3 334579999999999655555543 2 2347788876654
No 32
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.99 E-value=4.3e-08 Score=94.53 Aligned_cols=137 Identities=17% Similarity=0.246 Sum_probs=89.4
Q ss_pred CceeEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcc
Q 013142 48 AFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASN 127 (449)
Q Consensus 48 ~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~an 127 (449)
+.+..+=|+.+... ... |.++-...+++++-++.++|= |++++ +|. .|=-+..+.-|
T Consensus 62 ~v~~~~~~v~i~~~--~~i--w~~~~~~~~~~~~plVliHGy-GAg~g---~f~---------------~Nf~~La~~~~ 118 (365)
T KOG4409|consen 62 PVPYSKKYVRIPNG--IEI--WTITVSNESANKTPLVLIHGY-GAGLG---LFF---------------RNFDDLAKIRN 118 (365)
T ss_pred CCCcceeeeecCCC--cee--EEEeecccccCCCcEEEEecc-chhHH---HHH---------------HhhhhhhhcCc
Confidence 33444667776522 222 334333344666777788965 66643 333 24455666889
Q ss_pred eEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCc
Q 013142 128 LLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGF 207 (449)
Q Consensus 128 lLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~ 207 (449)
|..||+| |-|.|.... +..+-+.+-+.+.+-+.+|..+.. + .+.+|.|||+|| +||..-..+.
T Consensus 119 vyaiDll-G~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~~-L--~KmilvGHSfGG----YLaa~YAlKy------ 181 (365)
T KOG4409|consen 119 VYAIDLL-GFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKMG-L--EKMILVGHSFGG----YLAAKYALKY------ 181 (365)
T ss_pred eEEeccc-CCCCCCCCC---CCCCcccchHHHHHHHHHHHHHcC-C--cceeEeeccchH----HHHHHHHHhC------
Confidence 9999999 999996432 222333344578888999988763 3 479999999999 7777655544
Q ss_pred eeeeeeeEecCCCcCcc
Q 013142 208 KFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 208 ~inLkGi~iGng~id~~ 224 (449)
+-.++-++|.+||--+.
T Consensus 182 PerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 182 PERVEKLILVSPWGFPE 198 (365)
T ss_pred hHhhceEEEeccccccc
Confidence 33488999999886554
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.98 E-value=3.7e-08 Score=100.50 Aligned_cols=109 Identities=12% Similarity=0.077 Sum_probs=68.5
Q ss_pred CCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHH
Q 013142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTAR 157 (449)
Q Consensus 78 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~ 157 (449)
...|.||.++|.++.++.+ .-.. ..+.+..+++.+|.| |.|.|..... . ..+.++..+
T Consensus 103 ~~~p~vvllHG~~~~~~~~-~~~~------------------~~L~~~~~vi~~D~r-G~G~S~~~~~-~-~~~~~~~~~ 160 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFF-FRNF------------------DALASRFRVIAIDQL-GWGGSSRPDF-T-CKSTEETEA 160 (402)
T ss_pred CCCCEEEEECCCCcchhHH-HHHH------------------HHHHhCCEEEEECCC-CCCCCCCCCc-c-cccHHHHHH
Confidence 4679999999997766552 2111 113345789999999 9999853211 1 112233334
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 158 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
.+.+.+..|.+.. ...+++|.|+|+|| .+|..+..+. +-.++++++.++..
T Consensus 161 ~~~~~i~~~~~~l---~~~~~~lvGhS~GG----~la~~~a~~~------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 161 WFIDSFEEWRKAK---NLSNFILLGHSFGG----YVAAKYALKH------PEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHc---CCCCeEEEEECHHH----HHHHHHHHhC------chhhcEEEEECCcc
Confidence 4555666666543 23479999999999 5555554443 34588998887753
No 34
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.97 E-value=1.3e-08 Score=94.63 Aligned_cols=58 Identities=19% Similarity=0.156 Sum_probs=48.8
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
..+||+.+|..|.+++....+.+.+.+ .+ -++..+.++||+++.++|+...
T Consensus 188 ~~Pvlii~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~p~~~~ 238 (245)
T TIGR01738 188 SVPFLRLYGYLDGLVPAKVVPYLDKLA----------------------------PH-SELYIFAKAAHAPFLSHAEAFC 238 (245)
T ss_pred CCCEEEEeecCCcccCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCCccccCHHHHH
Confidence 689999999999999987766554441 14 6678899999999999999999
Q ss_pred HHHHHHh
Q 013142 428 HLFSSFV 434 (449)
Q Consensus 428 ~mi~~fl 434 (449)
+.+.+||
T Consensus 239 ~~i~~fi 245 (245)
T TIGR01738 239 ALLVAFK 245 (245)
T ss_pred HHHHhhC
Confidence 9999986
No 35
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.97 E-value=1.3e-08 Score=94.56 Aligned_cols=105 Identities=20% Similarity=0.238 Sum_probs=64.0
Q ss_pred CCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHHHH
Q 013142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (449)
Q Consensus 80 ~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~ 159 (449)
+|.||.++|.+|.+.. +-.+. ...+ +..+++-+|.| |.|.|..... ....+.++.++++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~----------------~~L~--~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~~~~~ 59 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALI----------------ELLG--PHFRCLAIDLP-GHGSSQSPDE-IERYDFEEAAQDI 59 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHH----------------HHhc--ccCeEEEEcCC-CCCCCCCCCc-cChhhHHHHHHHH
Confidence 4889999999887776 32221 1111 34789999988 9999854211 1112333444442
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 160 ~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
+..+.+.. ..++++|.|+|+||..+..+| .++ +-.++++++.++..
T Consensus 60 ---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a----~~~------~~~v~~lil~~~~~ 105 (251)
T TIGR03695 60 ---LATLLDQL---GIEPFFLVGYSMGGRIALYYA----LQY------PERVQGLILESGSP 105 (251)
T ss_pred ---HHHHHHHc---CCCeEEEEEeccHHHHHHHHH----HhC------chheeeeEEecCCC
Confidence 33333333 356899999999995444444 433 23488998877653
No 36
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.95 E-value=1.4e-07 Score=97.67 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=79.4
Q ss_pred CceeEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhh-hhccCCceecCCCCceeeccCCccCCc
Q 013142 48 AFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGA-FTELGPFYPRGDGRGLRRNSMSWNKAS 126 (449)
Q Consensus 48 ~~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~-f~E~GP~~i~~~~~~~~~N~~sW~~~a 126 (449)
..+.-.-|++.+ +..|||+...... ....|.||+++|.+|.+.++ .. +.+ .+.. .+.+..
T Consensus 173 ~~~~~~~~~~~~---~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~W-~~~~~~-----------~L~~---~~~~~y 233 (481)
T PLN03087 173 DCKFCTSWLSSS---NESLFVHVQQPKD-NKAKEDVLFIHGFISSSAFW-TETLFP-----------NFSD---AAKSTY 233 (481)
T ss_pred ccceeeeeEeeC---CeEEEEEEecCCC-CCCCCeEEEECCCCccHHHH-HHHHHH-----------HHHH---HhhCCC
Confidence 334445677663 3578887554332 22347899999999888773 31 100 0000 145568
Q ss_pred ceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCC
Q 013142 127 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKG 206 (449)
Q Consensus 127 nlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 206 (449)
.++.+|.| |.|.|....... .+.++.++++. +.+.+. +...+++|.|+|+||. +|..+..+.
T Consensus 234 rVia~Dl~-G~G~S~~p~~~~--ytl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~----iAl~~A~~~----- 295 (481)
T PLN03087 234 RLFAVDLL-GFGRSPKPADSL--YTLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCI----LALALAVKH----- 295 (481)
T ss_pred EEEEECCC-CCCCCcCCCCCc--CCHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHH----HHHHHHHhC-----
Confidence 99999999 999985322221 23334444442 233333 2346899999999994 444444332
Q ss_pred ceeeeeeeEecCCC
Q 013142 207 FKFNIKGVAIGNPL 220 (449)
Q Consensus 207 ~~inLkGi~iGng~ 220 (449)
+-.++++++.++.
T Consensus 296 -Pe~V~~LVLi~~~ 308 (481)
T PLN03087 296 -PGAVKSLTLLAPP 308 (481)
T ss_pred -hHhccEEEEECCC
Confidence 2237888887753
No 37
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.94 E-value=5.9e-08 Score=95.32 Aligned_cols=125 Identities=18% Similarity=0.318 Sum_probs=75.0
Q ss_pred EEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCc-cCCcceEEE
Q 013142 53 AGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSW-NKASNLLFV 131 (449)
Q Consensus 53 sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW-~~~anlLfI 131 (449)
.+|+.+.+ +..++|.-. .++. .|-||.++|+||.++.. .. . . .| .+..+++.+
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~-~~-~----------------~--~~~~~~~~vi~~ 59 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDP-GC-R----------------R--FFDPETYRIVLF 59 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCH-HH-H----------------h--ccCccCCEEEEE
Confidence 57888753 467887532 1222 34578899999876541 11 0 0 01 145799999
Q ss_pred EcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeee
Q 013142 132 ESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNI 211 (449)
Q Consensus 132 DqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inL 211 (449)
|+| |.|.|..... ....+.++.++++..+++ .. ...+++++|+||||. ++..+..+. +-.+
T Consensus 60 D~~-G~G~S~~~~~-~~~~~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~----ia~~~a~~~------p~~v 120 (306)
T TIGR01249 60 DQR-GCGKSTPHAC-LEENTTWDLVADIEKLRE----KL---GIKNWLVFGGSWGST----LALAYAQTH------PEVV 120 (306)
T ss_pred CCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHH----HHHHHHHHC------hHhh
Confidence 999 9999974321 112233445555544443 33 335799999999994 444444332 2347
Q ss_pred eeeEecCCCcC
Q 013142 212 KGVAIGNPLLR 222 (449)
Q Consensus 212 kGi~iGng~id 222 (449)
+++++.+..+.
T Consensus 121 ~~lvl~~~~~~ 131 (306)
T TIGR01249 121 TGLVLRGIFLL 131 (306)
T ss_pred hhheeeccccC
Confidence 88888777654
No 38
>PRK10749 lysophospholipase L2; Provisional
Probab=98.94 E-value=8.3e-08 Score=95.35 Aligned_cols=126 Identities=13% Similarity=0.119 Sum_probs=78.3
Q ss_pred CCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccc
Q 013142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (449)
Q Consensus 62 ~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy 141 (449)
.+..++|+.++.. +.+|+||.++|-.+.+.. +.-+. +.. . .+-.+++-+|.| |.|.|.
T Consensus 39 ~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~~---~~l----------~----~~g~~v~~~D~~-G~G~S~ 96 (330)
T PRK10749 39 DDIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAELA---YDL----------F----HLGYDVLIIDHR-GQGRSG 96 (330)
T ss_pred CCCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHHH---HHH----------H----HCCCeEEEEcCC-CCCCCC
Confidence 3457888766532 356899999998554433 22211 000 0 134689999999 999996
Q ss_pred cCCCC---CCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecC
Q 013142 142 SNTTS---DYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGN 218 (449)
Q Consensus 142 ~~~~~---~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGn 218 (449)
..... ....+-+..++|+..+++.....++ ..++++.|+|+|| .+|.....+. +-.++|+++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG----~ia~~~a~~~------p~~v~~lvl~~ 163 (330)
T PRK10749 97 RLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGG----AILTLFLQRH------PGVFDAIALCA 163 (330)
T ss_pred CCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHH----HHHHHHHHhC------CCCcceEEEEC
Confidence 32111 1112445667777777776554443 4689999999999 5554444332 23478999988
Q ss_pred CCcC
Q 013142 219 PLLR 222 (449)
Q Consensus 219 g~id 222 (449)
|...
T Consensus 164 p~~~ 167 (330)
T PRK10749 164 PMFG 167 (330)
T ss_pred chhc
Confidence 8654
No 39
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.92 E-value=1.2e-07 Score=91.20 Aligned_cols=112 Identities=19% Similarity=0.239 Sum_probs=75.8
Q ss_pred ceeEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCC-cc
Q 013142 49 FRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKA-SN 127 (449)
Q Consensus 49 ~~~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~-an 127 (449)
....-+|++++ + +++++.|. .++..|+++.|+|=|=.+=.+--. + . ..... ..
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q--------~----~-------~la~~~~r 73 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQ--------I----P-------GLASRGYR 73 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhhhhh--------h----h-------hhhhcceE
Confidence 34667888873 2 77887776 678899999999999766553000 0 0 01112 67
Q ss_pred eEEEEcCCCccccccCCC-CCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHH
Q 013142 128 LLFVESPAGVGWSYSNTT-SDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 196 (449)
Q Consensus 128 lLfIDqPvGtGfSy~~~~-~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~ 196 (449)
++.+|.+ |-|+|.+-.. ..| +.+..+.|+..+|.. +....+++.||+||+.-+=.+|..
T Consensus 74 viA~Dlr-GyG~Sd~P~~~~~Y--t~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~ 133 (322)
T KOG4178|consen 74 VIAPDLR-GYGFSDAPPHISEY--TIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALF 133 (322)
T ss_pred EEecCCC-CCCCCCCCCCccee--eHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHh
Confidence 8999999 9999986544 233 555677777777763 335689999999999544444443
No 40
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.89 E-value=3.7e-08 Score=98.36 Aligned_cols=62 Identities=18% Similarity=0.232 Sum_probs=51.4
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcC-CcccccccChHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSRA 426 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~-AGHmvP~dqP~~a 426 (449)
.+++||+.|+.|.++|....+...+.+. .+ -.+++|.+ +||+++.++|+..
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~---------------------------p~-a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG---------------------------PR-GSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC---------------------------CC-CeEEEEeCCccHHHHhcCHHHH
Confidence 6899999999999999887777666521 13 56688874 9999999999999
Q ss_pred HHHHHHHhcCC
Q 013142 427 LHLFSSFVHGR 437 (449)
Q Consensus 427 ~~mi~~fl~~~ 437 (449)
..++.+|+...
T Consensus 329 ~~~l~~FL~~~ 339 (343)
T PRK08775 329 DAILTTALRST 339 (343)
T ss_pred HHHHHHHHHhc
Confidence 99999999754
No 41
>PLN02965 Probable pheophorbidase
Probab=98.88 E-value=1.2e-07 Score=90.50 Aligned_cols=60 Identities=8% Similarity=0.200 Sum_probs=50.2
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
.+++|+..|..|.++|....+...+. ..+ -+++++.+|||+++.++|+...
T Consensus 193 ~vP~lvi~g~~D~~~~~~~~~~~~~~----------------------------~~~-a~~~~i~~~GH~~~~e~p~~v~ 243 (255)
T PLN02965 193 KVPRVYIKTAKDNLFDPVRQDVMVEN----------------------------WPP-AQTYVLEDSDHSAFFSVPTTLF 243 (255)
T ss_pred CCCEEEEEcCCCCCCCHHHHHHHHHh----------------------------CCc-ceEEEecCCCCchhhcCHHHHH
Confidence 79999999999999998766555544 124 6678899999999999999999
Q ss_pred HHHHHHhcC
Q 013142 428 HLFSSFVHG 436 (449)
Q Consensus 428 ~mi~~fl~~ 436 (449)
.++.+|+..
T Consensus 244 ~~l~~~~~~ 252 (255)
T PLN02965 244 QYLLQAVSS 252 (255)
T ss_pred HHHHHHHHH
Confidence 999999753
No 42
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.84 E-value=5.1e-08 Score=104.83 Aligned_cols=134 Identities=15% Similarity=0.211 Sum_probs=85.4
Q ss_pred CCCeeEEEEEEEecC-CCC-CCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeecc-CCccCCcceEEEEcCCCc
Q 013142 61 KNGRSLFYYFVEAEV-EPH-EKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNS-MSWNKASNLLFVESPAGV 137 (449)
Q Consensus 61 ~~~~~lFy~f~es~~-~~~-~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~-~sW~~~anlLfIDqPvGt 137 (449)
..|..+..|++.-.. ++. +-|+|++++||| +++ .|. . ...+. .=+.+-+.||+++..--+
T Consensus 373 ~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~-------~~~~~q~~~~~G~~V~~~n~RGS~ 435 (620)
T COG1506 373 NDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------S-------FNPEIQVLASAGYAVLAPNYRGST 435 (620)
T ss_pred CCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------c-------cchhhHHHhcCCeEEEEeCCCCCC
Confidence 345688888886532 333 249999999999 555 341 0 11111 113456889999966455
Q ss_pred cccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEec
Q 013142 138 GWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIG 217 (449)
Q Consensus 138 GfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iG 217 (449)
||+..-.......--....+|+.++++ |+.+.|..-...+.|+|.|||| +++..++.+.. .++..+..
T Consensus 436 GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG----ymtl~~~~~~~-------~f~a~~~~ 503 (620)
T COG1506 436 GYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG----YMTLLAATKTP-------RFKAAVAV 503 (620)
T ss_pred ccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH----HHHHHHHhcCc-------hhheEEec
Confidence 554421111000011235678888999 9999998877789999999999 88888877642 36666666
Q ss_pred CCCcCc
Q 013142 218 NPLLRL 223 (449)
Q Consensus 218 ng~id~ 223 (449)
.+.++.
T Consensus 504 ~~~~~~ 509 (620)
T COG1506 504 AGGVDW 509 (620)
T ss_pred cCcchh
Confidence 665554
No 43
>PLN02511 hydrolase
Probab=98.83 E-value=4.5e-08 Score=99.43 Aligned_cols=132 Identities=18% Similarity=0.190 Sum_probs=78.5
Q ss_pred EEEEEeeCCCCeeEEEEEEEe--cCCCCCCCeeEEecCCCChhhh-hhhhhhccCCceecCCCCceeeccCCccCCcceE
Q 013142 53 AGYVDVDVKNGRSLFYYFVEA--EVEPHEKPLTLWLNGGPGCSSV-GGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLL 129 (449)
Q Consensus 53 sGyl~v~~~~~~~lFy~f~es--~~~~~~~PlilWlnGGPG~SS~-~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlL 129 (449)
--++...+ |..+.+.++.. ...+.++|+||.++|..|+|.. ++-.+. ..-..+-.+++
T Consensus 73 re~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~-----------------~~~~~~g~~vv 133 (388)
T PLN02511 73 RECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHML-----------------LRARSKGWRVV 133 (388)
T ss_pred EEEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHH-----------------HHHHHCCCEEE
Confidence 44565543 34555533432 2234678999999999998642 111011 00013456899
Q ss_pred EEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCcee
Q 013142 130 FVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKF 209 (449)
Q Consensus 130 fIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~i 209 (449)
-+|.| |.|-|.......+ ....++|+.++++..-.++| ..+++++|+|.|| .++...+.+... ..
T Consensus 134 ~~d~r-G~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg----~i~~~yl~~~~~----~~ 198 (388)
T PLN02511 134 VFNSR-GCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGA----NILVNYLGEEGE----NC 198 (388)
T ss_pred EEecC-CCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhH----HHHHHHHHhcCC----CC
Confidence 99999 9999864332221 23456778777877767776 4689999999999 445444433321 23
Q ss_pred eeeeeEecC
Q 013142 210 NIKGVAIGN 218 (449)
Q Consensus 210 nLkGi~iGn 218 (449)
+|++.++.+
T Consensus 199 ~v~~~v~is 207 (388)
T PLN02511 199 PLSGAVSLC 207 (388)
T ss_pred CceEEEEEC
Confidence 366655433
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.81 E-value=1.1e-07 Score=112.26 Aligned_cols=107 Identities=16% Similarity=0.127 Sum_probs=69.3
Q ss_pred CCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCC-----CCCccC
Q 013142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTT-----SDYNCG 151 (449)
Q Consensus 77 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~-----~~~~~~ 151 (449)
.+..|.||+++|.+|.+..+ -.+.+ ...+..+++.+|.| |.|.|..... .....+
T Consensus 1368 ~~~~~~vVllHG~~~s~~~w-~~~~~------------------~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~s 1427 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGEDW-IPIMK------------------AISGSARCISIDLP-GHGGSKIQNHAKETQTEPTLS 1427 (1655)
T ss_pred CCCCCeEEEECCCCCCHHHH-HHHHH------------------HHhCCCEEEEEcCC-CCCCCCCccccccccccccCC
Confidence 34568999999999988773 22221 12244799999999 9999864321 011224
Q ss_pred chhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 152 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 152 ~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
.+..|+++.++++. +...+++|.|+|+|| .+|.++..+. +-.++++++.++.
T Consensus 1428 i~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG----~iAl~~A~~~------P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1428 VELVADLLYKLIEH-------ITPGKVTLVGYSMGA----RIALYMALRF------SDKIEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHHHHHHH-------hCCCCEEEEEECHHH----HHHHHHHHhC------hHhhCEEEEECCC
Confidence 45566666666653 334589999999999 5555555443 2347888886653
No 45
>PRK07581 hypothetical protein; Validated
Probab=98.79 E-value=2e-07 Score=92.85 Aligned_cols=59 Identities=10% Similarity=0.151 Sum_probs=50.8
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcC-CcccccccChHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSRA 426 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~-AGHmvP~dqP~~a 426 (449)
.++|||+.|+.|.++|....+.+.+.+ .+ .++++|.+ +||+++.+||+..
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~i----------------------------p~-a~l~~i~~~~GH~~~~~~~~~~ 325 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALI----------------------------PN-AELRPIESIWGHLAGFGQNPAD 325 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCccccccCcHHH
Confidence 799999999999999988877665551 14 66788998 9999999999999
Q ss_pred HHHHHHHhc
Q 013142 427 LHLFSSFVH 435 (449)
Q Consensus 427 ~~mi~~fl~ 435 (449)
..++++|+.
T Consensus 326 ~~~~~~~~~ 334 (339)
T PRK07581 326 IAFIDAALK 334 (339)
T ss_pred HHHHHHHHH
Confidence 999999985
No 46
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.63 E-value=3.4e-06 Score=85.48 Aligned_cols=72 Identities=19% Similarity=0.215 Sum_probs=56.2
Q ss_pred HHHHHHHHhcCCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEc-CCcc
Q 013142 338 LPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAH 416 (449)
Q Consensus 338 ~~~l~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~-~AGH 416 (449)
...+..| ..+|||..|+.|.++|....+...+.+... ..+ .+++.|. ++||
T Consensus 302 ~~~l~~I---~~PtLvI~G~~D~~~p~~~~~~la~~i~~a------------------------~~~-~~l~~i~~~~GH 353 (379)
T PRK00175 302 AAALARI---KARFLVVSFTSDWLFPPARSREIVDALLAA------------------------GAD-VSYAEIDSPYGH 353 (379)
T ss_pred HHHHhcC---CCCEEEEEECCccccCHHHHHHHHHHHHhc------------------------CCC-eEEEEeCCCCCc
Confidence 3444444 689999999999999998887766664321 012 5778885 9999
Q ss_pred cccccChHHHHHHHHHHhcCC
Q 013142 417 MVPYAQPSRALHLFSSFVHGR 437 (449)
Q Consensus 417 mvP~dqP~~a~~mi~~fl~~~ 437 (449)
+.+.++|+...+.|.+|+.+.
T Consensus 354 ~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 354 DAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred hhHhcCHHHHHHHHHHHHHhh
Confidence 999999999999999999763
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.60 E-value=7.9e-07 Score=88.44 Aligned_cols=62 Identities=16% Similarity=0.331 Sum_probs=50.2
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccC-hHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ-PSRA 426 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dq-P~~a 426 (449)
.+++|+.+|..|.+++..+++.+.++ ... .+ -++..+.+++|++..+. ++.+
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~----~~~----------------------~~-~~l~~~~g~~H~i~~E~~~~~v 322 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNK----LSI----------------------SN-KELHTLEDMDHVITIEPGNEEV 322 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHh----ccC----------------------CC-cEEEEECCCCCCCccCCCHHHH
Confidence 68999999999999999988887766 221 13 56678999999999885 6888
Q ss_pred HHHHHHHhcC
Q 013142 427 LHLFSSFVHG 436 (449)
Q Consensus 427 ~~mi~~fl~~ 436 (449)
++.+.+||.+
T Consensus 323 ~~~i~~wL~~ 332 (332)
T TIGR01607 323 LKKIIEWISN 332 (332)
T ss_pred HHHHHHHhhC
Confidence 8888889853
No 48
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.57 E-value=7.2e-06 Score=82.18 Aligned_cols=63 Identities=22% Similarity=0.320 Sum_probs=50.5
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEc-CCcccccccChHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVPYAQPSRA 426 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~-~AGHmvP~dqP~~a 426 (449)
..+||++.|+.|.++|....+...+.++.. .+ . .+|+.+. ++||+++.++|+..
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~-~~-----------------------~-v~~~~i~~~~GH~~~le~p~~~ 342 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALPAA-GL-----------------------R-VTYVEIESPYGHDAFLVETDQV 342 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHhhc-CC-----------------------c-eEEEEeCCCCCcchhhcCHHHH
Confidence 689999999999999998888777664321 00 1 4556664 89999999999999
Q ss_pred HHHHHHHhc
Q 013142 427 LHLFSSFVH 435 (449)
Q Consensus 427 ~~mi~~fl~ 435 (449)
.+.|.+|+.
T Consensus 343 ~~~l~~FL~ 351 (351)
T TIGR01392 343 EELIRGFLR 351 (351)
T ss_pred HHHHHHHhC
Confidence 999999974
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.53 E-value=5.3e-06 Score=80.18 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=54.8
Q ss_pred cceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCC
Q 013142 126 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 205 (449)
Q Consensus 126 anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (449)
.+++-+|.| |.|.|.... .+.+...+|+.++++.+.+..|.+ .+++++|+|.||. +|.......
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~----~a~~~a~~~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAAS----AALLYAPAD---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHH----HHHHHhhhC----
Confidence 789999999 999986431 133355677777777766666644 3699999999994 444332221
Q ss_pred CceeeeeeeEecCCCcCc
Q 013142 206 GFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 206 ~~~inLkGi~iGng~id~ 223 (449)
-.++|+++.||++..
T Consensus 122 ---~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVRT 136 (274)
T ss_pred ---CCccEEEEECCccCC
Confidence 248999999998653
No 50
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.45 E-value=1e-05 Score=79.17 Aligned_cols=137 Identities=23% Similarity=0.285 Sum_probs=87.3
Q ss_pred eEEEEEEeeCCCCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEE
Q 013142 51 QYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLF 130 (449)
Q Consensus 51 ~~sGyl~v~~~~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLf 130 (449)
...|+.... .+..++|+-++..+++. -+|++++|.=.++.- +.|+-.. +. ..=..++=
T Consensus 9 ~~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r----y~~la~~--------l~------~~G~~V~~ 66 (298)
T COG2267 9 RTEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR----YEELADD--------LA------ARGFDVYA 66 (298)
T ss_pred cccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH----HHHHHHH--------HH------hCCCEEEE
Confidence 334555442 45689999887765444 899999998444433 2221100 11 12257888
Q ss_pred EEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceee
Q 013142 131 VESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFN 210 (449)
Q Consensus 131 IDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~in 210 (449)
+|+| |.|.|.. .......+-++...|+.+|++......| ..|+||+|+|.|| .||..-+.+. .-+
T Consensus 67 ~D~R-GhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg----~Ia~~~~~~~------~~~ 131 (298)
T COG2267 67 LDLR-GHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGG----LIALLYLARY------PPR 131 (298)
T ss_pred ecCC-CCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHH----HHHHHHHHhC------Ccc
Confidence 9999 9999972 1111122234445566666665554444 6799999999999 6776666554 256
Q ss_pred eeeeEecCCCcCcc
Q 013142 211 IKGVAIGNPLLRLD 224 (449)
Q Consensus 211 LkGi~iGng~id~~ 224 (449)
++|+++-+|++...
T Consensus 132 i~~~vLssP~~~l~ 145 (298)
T COG2267 132 IDGLVLSSPALGLG 145 (298)
T ss_pred ccEEEEECccccCC
Confidence 89999999988776
No 51
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.44 E-value=2.3e-07 Score=85.93 Aligned_cols=56 Identities=21% Similarity=0.357 Sum_probs=47.3
Q ss_pred cCCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHH
Q 013142 347 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 426 (449)
Q Consensus 347 ~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a 426 (449)
-.+++|+++|..|.++|....+...+. ..+ ..++++.++||+...+.|+..
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~----------------------------~~~-~~~~~~~~~GH~~~~~~~~~~ 224 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKL----------------------------IPN-SQLVLIEGSGHFAFLEGPDEF 224 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHH----------------------------STT-EEEEEETTCCSTHHHHSHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHh----------------------------cCC-CEEEECCCCChHHHhcCHHhh
Confidence 379999999999999999888774444 125 778999999999999999999
Q ss_pred HHHHH
Q 013142 427 LHLFS 431 (449)
Q Consensus 427 ~~mi~ 431 (449)
.++|.
T Consensus 225 ~~~i~ 229 (230)
T PF00561_consen 225 NEIII 229 (230)
T ss_dssp HHHHH
T ss_pred hhhhc
Confidence 98875
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=98.43 E-value=9.3e-06 Score=86.59 Aligned_cols=95 Identities=17% Similarity=0.200 Sum_probs=63.5
Q ss_pred CCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccc
Q 013142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (449)
Q Consensus 62 ~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy 141 (449)
.+..+.|+-+ .+.+.|.||.++|.++.+..+ .-+.+. +.+..+++.+|.| |.|.|.
T Consensus 11 ~g~~l~~~~~----g~~~~~~ivllHG~~~~~~~w-~~~~~~------------------L~~~~~Vi~~D~~-G~G~S~ 66 (582)
T PRK05855 11 DGVRLAVYEW----GDPDRPTVVLVHGYPDNHEVW-DGVAPL------------------LADRFRVVAYDVR-GAGRSS 66 (582)
T ss_pred CCEEEEEEEc----CCCCCCeEEEEcCCCchHHHH-HHHHHH------------------hhcceEEEEecCC-CCCCCC
Confidence 3456777643 233479999999998776652 332210 2334789999999 999997
Q ss_pred cCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccc
Q 013142 142 SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAG 187 (449)
Q Consensus 142 ~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG 187 (449)
...... ..+.++.++|+.++++.. - ..++++|+|+|+||
T Consensus 67 ~~~~~~-~~~~~~~a~dl~~~i~~l---~---~~~~~~lvGhS~Gg 105 (582)
T PRK05855 67 APKRTA-AYTLARLADDFAAVIDAV---S---PDRPVHLLAHDWGS 105 (582)
T ss_pred CCCccc-ccCHHHHHHHHHHHHHHh---C---CCCcEEEEecChHH
Confidence 432211 235667788888888753 1 13469999999999
No 53
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.41 E-value=1e-05 Score=82.85 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=52.0
Q ss_pred cceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCC
Q 013142 126 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 205 (449)
Q Consensus 126 anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (449)
.++|-+|.| |+|.|..... + .........+..++...|.....++.|+|.|+||.+++.+|.. .
T Consensus 223 y~vl~~D~p-G~G~s~~~~~-----~--~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~----~---- 286 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWKL-----T--QDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYL----E---- 286 (414)
T ss_pred CEEEEECCC-CCCCCCCCCc-----c--ccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHh----C----
Confidence 789999999 9999853211 1 1111222344456666666666789999999999766666532 1
Q ss_pred CceeeeeeeEecCCCcC
Q 013142 206 GFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 206 ~~~inLkGi~iGng~id 222 (449)
+-.++++++.+|.++
T Consensus 287 --p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 287 --PPRLKAVACLGPVVH 301 (414)
T ss_pred --CcCceEEEEECCccc
Confidence 224889888877654
No 54
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.39 E-value=2e-05 Score=76.15 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=47.3
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
.++++++.|..|.++|..-.+.+++.+. . -+.+++. +||+.+..+|+...
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~----------------------------~-~~~~~l~-~gH~p~ls~P~~~~ 260 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP----------------------------P-SQVYELE-SDHSPFFSTPFLLF 260 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC----------------------------c-cEEEEEC-CCCCccccCHHHHH
Confidence 5899999999999999887776665521 2 3456675 99999999999999
Q ss_pred HHHHHHhcC
Q 013142 428 HLFSSFVHG 436 (449)
Q Consensus 428 ~mi~~fl~~ 436 (449)
++|.++...
T Consensus 261 ~~i~~~a~~ 269 (273)
T PLN02211 261 GLLIKAAAS 269 (273)
T ss_pred HHHHHHHHH
Confidence 999887643
No 55
>PRK10985 putative hydrolase; Provisional
Probab=98.39 E-value=3.9e-05 Score=76.01 Aligned_cols=46 Identities=9% Similarity=0.002 Sum_probs=35.4
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccC
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 422 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dq 422 (449)
.+++|+.+|+.|.+++....+...+. ..+ ++++++.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~~~~----------------------------~~~-~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKPESL----------------------------PPN-VEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHHHHh----------------------------CCC-eEEEECCCCCceeeCCC
Confidence 78999999999999987655543221 125 88899999999988764
No 56
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.34 E-value=1.5e-05 Score=73.87 Aligned_cols=93 Identities=13% Similarity=0.115 Sum_probs=59.4
Q ss_pred CCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccC
Q 013142 124 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 203 (449)
Q Consensus 124 ~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 203 (449)
+=..|+.+|...+.||+..-........-....+|+.++++...++. ......+.|+|.|||| ++|..+..+.
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG----~~a~~~~~~~-- 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGG----YLALLAATQH-- 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHH----HHHHHHHHHT--
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccc----cccchhhccc--
Confidence 45789999999777777632211111122356777887777665554 4455679999999999 5555554432
Q ss_pred CCCceeeeeeeEecCCCcCcccch
Q 013142 204 SKGFKFNIKGVAIGNPLLRLDQDV 227 (449)
Q Consensus 204 ~~~~~inLkGi~iGng~id~~~~~ 227 (449)
+-..+.++.++|.+|.....
T Consensus 86 ----~~~f~a~v~~~g~~d~~~~~ 105 (213)
T PF00326_consen 86 ----PDRFKAAVAGAGVSDLFSYY 105 (213)
T ss_dssp ----CCGSSEEEEESE-SSTTCSB
T ss_pred ----ceeeeeeeccceecchhccc
Confidence 23478999999998876543
No 57
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.33 E-value=1.5e-05 Score=78.91 Aligned_cols=61 Identities=31% Similarity=0.517 Sum_probs=51.7
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
+.+|||..|+.|.++|...++...++ . .| ..+..|.++||.+..++|++..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~----~------------------------pn-~~~~~I~~~gH~~h~e~Pe~~~ 314 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKK----L------------------------PN-AELVEIPGAGHLPHLERPEEVA 314 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhh----C------------------------CC-ceEEEeCCCCcccccCCHHHHH
Confidence 48899999999999998855544444 2 26 8999999999999999999999
Q ss_pred HHHHHHhcCC
Q 013142 428 HLFSSFVHGR 437 (449)
Q Consensus 428 ~mi~~fl~~~ 437 (449)
..|..|+.+.
T Consensus 315 ~~i~~Fi~~~ 324 (326)
T KOG1454|consen 315 ALLRSFIARL 324 (326)
T ss_pred HHHHHHHHHh
Confidence 9999999753
No 58
>PRK10566 esterase; Provisional
Probab=98.29 E-value=2.7e-05 Score=73.67 Aligned_cols=62 Identities=29% Similarity=0.404 Sum_probs=45.5
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
..++|+.+|..|.+++...++.+.+.++.. +.. .+ +++.++.++||.+. |+ .+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~-g~~---------------------~~-~~~~~~~~~~H~~~---~~-~~ 238 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRER-GLD---------------------KN-LTCLWEPGVRHRIT---PE-AL 238 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhc-CCC---------------------cc-eEEEecCCCCCccC---HH-HH
Confidence 479999999999999999888887775322 110 14 88999999999974 43 45
Q ss_pred HHHHHHhcC
Q 013142 428 HLFSSFVHG 436 (449)
Q Consensus 428 ~mi~~fl~~ 436 (449)
+.+.+|+..
T Consensus 239 ~~~~~fl~~ 247 (249)
T PRK10566 239 DAGVAFFRQ 247 (249)
T ss_pred HHHHHHHHh
Confidence 555567753
No 59
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.13 E-value=0.00016 Score=68.95 Aligned_cols=129 Identities=20% Similarity=0.149 Sum_probs=86.2
Q ss_pred CCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccc
Q 013142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (449)
Q Consensus 62 ~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy 141 (449)
.+..||.-.....++++.+-+|+.++|.=+-||- .|.+.-. +++..| .-+--+|++ |.|.|.
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~---~~~~~a~-~l~~~g-------------~~v~a~D~~-GhG~Sd 97 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSW---RYQSTAK-RLAKSG-------------FAVYAIDYE-GHGRSD 97 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchh---hHHHHHH-HHHhCC-------------CeEEEeecc-CCCcCC
Confidence 4567887555444445777899999987555532 2222111 111111 235678998 999997
Q ss_pred cCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 142 SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 142 ~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
+ ...|..+-+.+.+|+..|+..+.. ..++++.|.|++|||+|| ++|..+..+. +--..|+++..|..
T Consensus 98 G--l~~yi~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGG----AV~Ll~~~k~------p~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 98 G--LHAYVPSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGG----AVALLIALKD------PNFWDGAILVAPMC 164 (313)
T ss_pred C--CcccCCcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcch----HHHHHHHhhC------Ccccccceeeeccc
Confidence 4 345667778888998888887654 447788999999999999 7887777653 23367888866654
No 60
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.11 E-value=0.00015 Score=73.58 Aligned_cols=65 Identities=12% Similarity=0.088 Sum_probs=53.2
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcC-CcccccccChHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSRA 426 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~-AGHmvP~dqP~~a 426 (449)
..+|||+.|+.|.++|....+...+.++.. -.+ .++.+|.+ +||+.+.++|+..
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp~~------------------------~~~-a~l~~I~s~~GH~~~le~p~~~ 377 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQKQ------------------------GKY-AEVYEIESINGHMAGVFDIHLF 377 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhhhc------------------------CCC-eEEEEECCCCCcchhhcCHHHH
Confidence 799999999999999988777666653211 014 78899985 9999999999999
Q ss_pred HHHHHHHhcCC
Q 013142 427 LHLFSSFVHGR 437 (449)
Q Consensus 427 ~~mi~~fl~~~ 437 (449)
.+.|.+|+..+
T Consensus 378 ~~~I~~FL~~~ 388 (389)
T PRK06765 378 EKKIYEFLNRK 388 (389)
T ss_pred HHHHHHHHccc
Confidence 99999999763
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.01 E-value=0.00033 Score=64.52 Aligned_cols=104 Identities=22% Similarity=0.275 Sum_probs=62.2
Q ss_pred CCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHHHH
Q 013142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (449)
Q Consensus 80 ~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~ 159 (449)
.|.+++++|+|+++..+ ....+. +...... .+++.+|+| |.|.|. .. .. .....++++
T Consensus 21 ~~~i~~~hg~~~~~~~~-~~~~~~-----------~~~~~~~----~~~~~~d~~-g~g~s~-~~--~~--~~~~~~~~~ 78 (282)
T COG0596 21 GPPLVLLHGFPGSSSVW-RPVFKV-----------LPALAAR----YRVIAPDLR-GHGRSD-PA--GY--SLSAYADDL 78 (282)
T ss_pred CCeEEEeCCCCCchhhh-HHHHHH-----------hhccccc----eEEEEeccc-CCCCCC-cc--cc--cHHHHHHHH
Confidence 67999999999998873 221000 0111111 899999999 999997 11 00 111124444
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 160 ~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
..+++ .. ...++++.|+|+|| .++..+..+. +-.++++++.++...
T Consensus 79 ~~~~~----~~---~~~~~~l~G~S~Gg----~~~~~~~~~~------p~~~~~~v~~~~~~~ 124 (282)
T COG0596 79 AALLD----AL---GLEKVVLVGHSMGG----AVALALALRH------PDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHHH----Hh---CCCceEEEEecccH----HHHHHHHHhc------chhhheeeEecCCCC
Confidence 44444 32 23349999999998 5555444433 224778887776544
No 62
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.00 E-value=1.7e-05 Score=78.57 Aligned_cols=132 Identities=20% Similarity=0.277 Sum_probs=82.4
Q ss_pred eEEEEEEEe--cCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCcccccc
Q 013142 65 SLFYYFVEA--EVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYS 142 (449)
Q Consensus 65 ~lFy~f~es--~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~ 142 (449)
.-.||+.++ +.+|++|||||+++|| |.+.+.=|+.+. .-.+=|...+...+|.+|-..-. |-
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDYsLt~--~~- 168 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDYSLTS--SD- 168 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEeccccc--cc-
Confidence 456999985 3468889999999999 556666666552 11122223334499999966332 00
Q ss_pred CCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 143 NTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 143 ~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
.....++ .+..++.+..+...+.. ...++.|.|+|-||+-+-.+..++.+.+. .+--|++++.+||++
T Consensus 169 ~~~~~yP----tQL~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~-----~~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 169 EHGHKYP----TQLRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNK-----LPYPKSAILISPWVN 236 (374)
T ss_pred cCCCcCc----hHHHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCC-----CCCCceeEEECCCcC
Confidence 0111122 12333333444444322 24579999999999888888888766443 123479999999999
Q ss_pred cc
Q 013142 223 LD 224 (449)
Q Consensus 223 ~~ 224 (449)
+.
T Consensus 237 l~ 238 (374)
T PF10340_consen 237 LV 238 (374)
T ss_pred Cc
Confidence 86
No 63
>PLN02442 S-formylglutathione hydrolase
Probab=97.97 E-value=0.00088 Score=65.07 Aligned_cols=48 Identities=10% Similarity=0.063 Sum_probs=35.9
Q ss_pred cCCcEEEEecCCCccCCch-hHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCccccc
Q 013142 347 NGIPVWVFSGDQDSVVPLL-GSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 419 (449)
Q Consensus 347 ~~irVLiy~Gd~D~i~~~~-g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP 419 (449)
.+.+|++.+|+.|.+|+.. .++.+.+.++.. + .+ .++.++.|++|-..
T Consensus 216 ~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~-g-----------------------~~-~~~~~~pg~~H~~~ 264 (283)
T PLN02442 216 VSATILIDQGEADKFLKEQLLPENFEEACKEA-G-----------------------AP-VTLRLQPGYDHSYF 264 (283)
T ss_pred cCCCEEEEECCCCccccccccHHHHHHHHHHc-C-----------------------CC-eEEEEeCCCCccHH
Confidence 3789999999999999974 466666664321 1 14 88899999999766
No 64
>PLN02872 triacylglycerol lipase
Probab=97.94 E-value=7.3e-05 Score=75.91 Aligned_cols=61 Identities=13% Similarity=0.317 Sum_probs=48.3
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCccc---ccccChH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM---VPYAQPS 424 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHm---vP~dqP~ 424 (449)
.++|+++.|..|.+++....+++.+++. - . .....++++||+ ...+.|+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp----~-----------------------~-~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP----S-----------------------K-PELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC----C-----------------------c-cEEEEcCCCCCHHHHhCcchHH
Confidence 5899999999999999988888877732 1 1 234567899996 3558899
Q ss_pred HHHHHHHHHhcC
Q 013142 425 RALHLFSSFVHG 436 (449)
Q Consensus 425 ~a~~mi~~fl~~ 436 (449)
.+++.+.+|+.+
T Consensus 377 ~V~~~Il~fL~~ 388 (395)
T PLN02872 377 DVYNHMIQFFRS 388 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999988889874
No 65
>PRK10115 protease 2; Provisional
Probab=97.81 E-value=0.00079 Score=73.41 Aligned_cols=137 Identities=15% Similarity=0.037 Sum_probs=74.7
Q ss_pred CCCeeEEEEEEEecC--CCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCC-cceEEEEcCCCc
Q 013142 61 KNGRSLFYYFVEAEV--EPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKA-SNLLFVESPAGV 137 (449)
Q Consensus 61 ~~~~~lFy~f~es~~--~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~-anlLfIDqPvGt 137 (449)
..|..+-.|++-... .....|++|+.+||||.|.. -++..+. .+|... .-+++..-==|+
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~-p~f~~~~----------------~~l~~rG~~v~~~n~RGs~ 486 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASID-ADFSFSR----------------LSLLDRGFVYAIVHVRGGG 486 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC-CCccHHH----------------HHHHHCCcEEEEEEcCCCC
Confidence 344556655543221 23456999999999999854 1221111 112222 223333323244
Q ss_pred cccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEec
Q 013142 138 GWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIG 217 (449)
Q Consensus 138 GfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iG 217 (449)
||-..-...+...+-...-+|+.+..+...++ .--....+.|.|-|||| .++..++.+. +-.+++++.+
T Consensus 487 g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG----~l~~~~~~~~------Pdlf~A~v~~ 555 (686)
T PRK10115 487 ELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGG----MLMGVAINQR------PELFHGVIAQ 555 (686)
T ss_pred ccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHH----HHHHHHHhcC------hhheeEEEec
Confidence 44431111100001113456666666544433 22334579999999999 7777776553 2349999999
Q ss_pred CCCcCccc
Q 013142 218 NPLLRLDQ 225 (449)
Q Consensus 218 ng~id~~~ 225 (449)
.|++|...
T Consensus 556 vp~~D~~~ 563 (686)
T PRK10115 556 VPFVDVVT 563 (686)
T ss_pred CCchhHhh
Confidence 99998754
No 66
>PRK11460 putative hydrolase; Provisional
Probab=97.63 E-value=0.0028 Score=59.64 Aligned_cols=62 Identities=18% Similarity=0.202 Sum_probs=47.1
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
..+|++.+|..|.++|...+++..+.|+.. + .+ .++.++.++||.+..+.-+.+.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~-g-----------------------~~-~~~~~~~~~gH~i~~~~~~~~~ 202 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISL-G-----------------------GD-VTLDIVEDLGHAIDPRLMQFAL 202 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHC-C-----------------------CC-eEEEEECCCCCCCCHHHHHHHH
Confidence 579999999999999999988888875422 1 14 7888899999999765555555
Q ss_pred HHHHHHh
Q 013142 428 HLFSSFV 434 (449)
Q Consensus 428 ~mi~~fl 434 (449)
+-|++++
T Consensus 203 ~~l~~~l 209 (232)
T PRK11460 203 DRLRYTV 209 (232)
T ss_pred HHHHHHc
Confidence 5555555
No 67
>PRK13604 luxD acyl transferase; Provisional
Probab=97.46 E-value=0.0097 Score=57.98 Aligned_cols=66 Identities=17% Similarity=0.253 Sum_probs=47.5
Q ss_pred hHHHHHHHHhcCCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcc
Q 013142 337 ILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAH 416 (449)
Q Consensus 337 ~~~~l~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGH 416 (449)
..+.+..+ ..+||+++|+.|..||..+++.+.++++. ++ -.+..+.||+|
T Consensus 194 ~i~~~~~l---~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--------------------------~~-kkl~~i~Ga~H 243 (307)
T PRK13604 194 TINKMKGL---DIPFIAFTANNDSWVKQSEVIDLLDSIRS--------------------------EQ-CKLYSLIGSSH 243 (307)
T ss_pred HHHHHhhc---CCCEEEEEcCCCCccCHHHHHHHHHHhcc--------------------------CC-cEEEEeCCCcc
Confidence 34444444 69999999999999999999988887321 14 67799999999
Q ss_pred cccccChHHHHHHHHHH
Q 013142 417 MVPYAQPSRALHLFSSF 433 (449)
Q Consensus 417 mvP~dqP~~a~~mi~~f 433 (449)
.... .+.....+.+.-
T Consensus 244 ~l~~-~~~~~~~~~~~~ 259 (307)
T PRK13604 244 DLGE-NLVVLRNFYQSV 259 (307)
T ss_pred ccCc-chHHHHHHHHHH
Confidence 9864 444444444443
No 68
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.46 E-value=0.00084 Score=64.47 Aligned_cols=129 Identities=10% Similarity=0.032 Sum_probs=74.0
Q ss_pred CeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCcc-CCcceEEEEcCCCccccc
Q 013142 63 GRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGVGWSY 141 (449)
Q Consensus 63 ~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~-~~anlLfIDqPvGtGfSy 141 (449)
..++|.|+++... ...+|+||.++|-.+-..-..-.+... -..+. .-.+++-+|.| |.|.|.
T Consensus 9 ~g~~~~~~~~p~~-~~~~~~VlllHG~g~~~~~~~~~~~~l---------------a~~La~~Gy~Vl~~Dl~-G~G~S~ 71 (266)
T TIGR03101 9 HGFRFCLYHPPVA-VGPRGVVIYLPPFAEEMNKSRRMVALQ---------------ARAFAAGGFGVLQIDLY-GCGDSA 71 (266)
T ss_pred CCcEEEEEecCCC-CCCceEEEEECCCcccccchhHHHHHH---------------HHHHHHCCCEEEEECCC-CCCCCC
Confidence 4568888886643 233799999998533110000011000 00122 34789999999 999986
Q ss_pred cCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 142 SNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 142 ~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
..... .+.+..++|+..+++ |+++.. ..+++|+|+|+||..+-.+| .+. +-.++++++-+|.+
T Consensus 72 g~~~~---~~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A----~~~------p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 72 GDFAA---ARWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAA----NPL------AAKCNRLVLWQPVV 134 (266)
T ss_pred Ccccc---CCHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHH----HhC------ccccceEEEecccc
Confidence 43221 133334555554433 333332 45899999999995544444 322 23478999988877
Q ss_pred Cccc
Q 013142 222 RLDQ 225 (449)
Q Consensus 222 d~~~ 225 (449)
+...
T Consensus 135 ~g~~ 138 (266)
T TIGR03101 135 SGKQ 138 (266)
T ss_pred chHH
Confidence 6543
No 69
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.39 E-value=0.00079 Score=62.34 Aligned_cols=32 Identities=16% Similarity=0.042 Sum_probs=26.5
Q ss_pred CcEEEEecCCCccCCchhHHHHHHHHHHhcCC
Q 013142 349 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNF 380 (449)
Q Consensus 349 irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~ 380 (449)
-+++|++|..|.++|...++...+.++.-.+.
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~~~~~ 200 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLKVYGE 200 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHHhcCC
Confidence 34789999999999999999999998754333
No 70
>PRK11071 esterase YqiA; Provisional
Probab=97.33 E-value=0.0058 Score=55.63 Aligned_cols=54 Identities=13% Similarity=0.176 Sum_probs=43.6
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
..+|+|.+|..|-++|+..+.+..++ ...+.++||+|... ..+..+
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~--------------------------------~~~~~~~ggdH~f~--~~~~~~ 181 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAA--------------------------------CRQTVEEGGNHAFV--GFERYF 181 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHh--------------------------------cceEEECCCCcchh--hHHHhH
Confidence 57899999999999999888766554 33457899999983 448888
Q ss_pred HHHHHHhc
Q 013142 428 HLFSSFVH 435 (449)
Q Consensus 428 ~mi~~fl~ 435 (449)
+.+.+|+.
T Consensus 182 ~~i~~fl~ 189 (190)
T PRK11071 182 NQIVDFLG 189 (190)
T ss_pred HHHHHHhc
Confidence 99998874
No 71
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=97.31 E-value=0.002 Score=55.07 Aligned_cols=42 Identities=31% Similarity=0.468 Sum_probs=32.2
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCccc
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM 417 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHm 417 (449)
.++|++..|..|.+++....+.+.++++ . + -++..|.|++|+
T Consensus 104 ~~pv~~i~g~~D~~~~~~~~~~~~~~~~----~-----------------------~-~~~~~i~g~~H~ 145 (145)
T PF12695_consen 104 RIPVLFIHGENDPLVPPEQVRRLYEALP----G-----------------------P-KELYIIPGAGHF 145 (145)
T ss_dssp TSEEEEEEETT-SSSHHHHHHHHHHHHC----S-----------------------S-EEEEEETTS-TT
T ss_pred CCcEEEEEECCCCcCCHHHHHHHHHHcC----C-----------------------C-cEEEEeCCCcCc
Confidence 3499999999999999888888777732 1 3 677999999996
No 72
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.28 E-value=0.00048 Score=64.85 Aligned_cols=107 Identities=22% Similarity=0.377 Sum_probs=73.5
Q ss_pred CCCCCeeEEecCCCChhhhhhhhhh-ccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhh
Q 013142 77 PHEKPLTLWLNGGPGCSSVGGGAFT-ELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDAST 155 (449)
Q Consensus 77 ~~~~PlilWlnGGPG~SS~~~g~f~-E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~ 155 (449)
...-|+++.++|| |.|.|.++.|. |+ + .-. ..-++-+|.- |.|-|-.++..+. +-+..
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a~el-----~---------s~~---~~r~~a~DlR-gHGeTk~~~e~dl--S~eT~ 129 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFASEL-----K---------SKI---RCRCLALDLR-GHGETKVENEDDL--SLETM 129 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHHHHH-----H---------hhc---ceeEEEeecc-ccCccccCChhhc--CHHHH
Confidence 3456999999999 99998655554 21 0 000 1113678966 9999988776653 66788
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEec
Q 013142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIG 217 (449)
Q Consensus 156 A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iG 217 (449)
++|+.+.++.+|..-| .+++|.|||+|| ++|.+-...+. --+|-|+.+.
T Consensus 130 ~KD~~~~i~~~fge~~----~~iilVGHSmGG----aIav~~a~~k~-----lpsl~Gl~vi 178 (343)
T KOG2564|consen 130 SKDFGAVIKELFGELP----PQIILVGHSMGG----AIAVHTAASKT-----LPSLAGLVVI 178 (343)
T ss_pred HHHHHHHHHHHhccCC----CceEEEeccccc----hhhhhhhhhhh-----chhhhceEEE
Confidence 9999999998885443 369999999999 55544433322 2348888883
No 73
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.15 E-value=0.0087 Score=58.00 Aligned_cols=90 Identities=19% Similarity=0.179 Sum_probs=56.0
Q ss_pred ecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCc
Q 013142 73 AEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGD 152 (449)
Q Consensus 73 s~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~ 152 (449)
+..+..+.|-++-++|==|.-=.+ .-+. .+ +..--. +.++-||.= -.|.|..... .+-
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~Nw-~sv~------k~-----Ls~~l~-----~~v~~vd~R-nHG~Sp~~~~----h~~ 102 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKENW-RSVA------KN-----LSRKLG-----RDVYAVDVR-NHGSSPKITV----HNY 102 (315)
T ss_pred cccccCCCCceEEecccccCCCCH-HHHH------HH-----hccccc-----CceEEEecc-cCCCCccccc----cCH
Confidence 344677889999999765533221 1110 00 000000 167788876 8888864432 355
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccc
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAG 187 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG 187 (449)
+..|+|+..||..+-.. ++..+..|.|||+||
T Consensus 103 ~~ma~dv~~Fi~~v~~~---~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGGS---TRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHcccc---cccCCceecccCcch
Confidence 67888888888865432 345689999999999
No 74
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.14 E-value=0.043 Score=57.86 Aligned_cols=85 Identities=12% Similarity=0.052 Sum_probs=51.1
Q ss_pred cceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCC
Q 013142 126 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 205 (449)
Q Consensus 126 anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (449)
..++-||-+ |.|.|....+ -++.+.+.+.++|..+.+.. ...+++++|+|.||..+...+..+.....
T Consensus 221 f~V~~iDwr-gpg~s~~~~~-----~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~--- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADKT-----FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD--- 288 (532)
T ss_pred cEEEEEECC-CCCcccccCC-----hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC---
Confidence 568888876 8887743211 11233345666776666544 35689999999999665442222222210
Q ss_pred CceeeeeeeEecCCCcCcc
Q 013142 206 GFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 206 ~~~inLkGi~iGng~id~~ 224 (449)
.-.++++++.+..+|..
T Consensus 289 --~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCccceEEEEecCcCCC
Confidence 12378888877777754
No 75
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.13 E-value=0.0056 Score=56.81 Aligned_cols=59 Identities=24% Similarity=0.408 Sum_probs=41.1
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
+.+|++.+|+.|.++|....+...+.|+.. + .+ +++.++.|.||-++. ..+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~-~-----------------------~~-v~~~~~~g~gH~i~~----~~~ 205 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAA-G-----------------------AN-VEFHEYPGGGHEISP----EEL 205 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCT-T------------------------G-EEEEEETT-SSS--H----HHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhc-C-----------------------CC-EEEEEcCCCCCCCCH----HHH
Confidence 589999999999999998888777775422 0 14 999999999999973 555
Q ss_pred HHHHHHhc
Q 013142 428 HLFSSFVH 435 (449)
Q Consensus 428 ~mi~~fl~ 435 (449)
..+.+||.
T Consensus 206 ~~~~~~l~ 213 (216)
T PF02230_consen 206 RDLREFLE 213 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 56666764
No 76
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=97.05 E-value=0.034 Score=55.65 Aligned_cols=61 Identities=15% Similarity=0.264 Sum_probs=46.1
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccCh---H
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP---S 424 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP---~ 424 (449)
..+|++++|..|.+++...++.+.+.+.. .+ .++.++. +||+.+.+.| +
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--------------------------~~-~~~~~~~-~gH~~~~~~~~~~~ 337 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVSS--------------------------ED-YTELSFP-GGHIGIYVSGKAQK 337 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcCC--------------------------CC-eEEEEcC-CCCEEEEECchhHh
Confidence 78999999999999999888877776321 13 5555555 8999988766 5
Q ss_pred HHHHHHHHHhcC
Q 013142 425 RALHLFSSFVHG 436 (449)
Q Consensus 425 ~a~~mi~~fl~~ 436 (449)
.+..-+.+|+..
T Consensus 338 ~v~~~i~~wl~~ 349 (350)
T TIGR01836 338 EVPPAIGKWLQA 349 (350)
T ss_pred hhhHHHHHHHHh
Confidence 666777778754
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.91 E-value=0.0076 Score=58.20 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=36.1
Q ss_pred CCcEEEEecCCCccCCc-hhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccCh
Q 013142 348 GIPVWVFSGDQDSVVPL-LGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 423 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~-~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP 423 (449)
..+++|.+|..|..++. ...+...+.++.. + .+ .++.++.|+||--..-.+
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~-g-----------------------~~-v~~~~~~g~~H~f~~~~~ 262 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAA-G-----------------------QA-LTLRRQAGYDHSYYFIAS 262 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHc-C-----------------------CC-eEEEEeCCCCccchhHHH
Confidence 46899999999999998 4555555554321 1 14 888999999998765443
No 78
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.86 E-value=0.0099 Score=55.33 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=47.4
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
..+|.++.|+.|.+|...-...|-+.-+ +. +++-++. .|||-+.+|.+.+.
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~---------------------------~~-f~l~~fd-GgHFfl~~~~~~v~ 226 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK---------------------------GD-FTLRVFD-GGHFFLNQQREEVL 226 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc---------------------------CC-ceEEEec-CcceehhhhHHHHH
Confidence 6899999999999999887777766511 13 6666666 89999999999999
Q ss_pred HHHHHHhc
Q 013142 428 HLFSSFVH 435 (449)
Q Consensus 428 ~mi~~fl~ 435 (449)
..+.+.+.
T Consensus 227 ~~i~~~l~ 234 (244)
T COG3208 227 ARLEQHLA 234 (244)
T ss_pred HHHHHHhh
Confidence 88887774
No 79
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.74 E-value=0.037 Score=52.94 Aligned_cols=126 Identities=17% Similarity=0.279 Sum_probs=70.4
Q ss_pred CCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcc-----eEEEEc---
Q 013142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASN-----LLFVES--- 133 (449)
Q Consensus 62 ~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~an-----lLfIDq--- 133 (449)
++...-||+|+-...++.+||||-|+|+=|..+- . .+-..|++.|. |+|-|+
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag---~-----------------~~~sg~d~lAd~~gFlV~yPdg~~~ 102 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG---Q-----------------LHGTGWDALADREGFLVAYPDGYDR 102 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHH---h-----------------hcccchhhhhcccCcEEECcCcccc
Confidence 3456788888776667778999999999654443 1 12233444443 344331
Q ss_pred ---CCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceee
Q 013142 134 ---PAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFN 210 (449)
Q Consensus 134 ---PvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~in 210 (449)
|-+.|-++...+.. ...+.+..+.+.+.....+| ......+||+|-|-|| .+|.++.-.- +--
T Consensus 103 ~wn~~~~~~~~~p~~~~---~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG----~Ma~~lac~~------p~~ 168 (312)
T COG3509 103 AWNANGCGNWFGPADRR---RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGG----RMANRLACEY------PDI 168 (312)
T ss_pred ccCCCcccccCCccccc---CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHH----HHHHHHHhcC------ccc
Confidence 23444443222111 11122333444444444555 3455679999999999 4455444332 122
Q ss_pred eeeeEecCCCc
Q 013142 211 IKGVAIGNPLL 221 (449)
Q Consensus 211 LkGi~iGng~i 221 (449)
+.++++..|..
T Consensus 169 faa~A~VAg~~ 179 (312)
T COG3509 169 FAAIAPVAGLL 179 (312)
T ss_pred ccceeeeeccc
Confidence 77888877766
No 80
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.74 E-value=0.015 Score=54.51 Aligned_cols=108 Identities=18% Similarity=0.266 Sum_probs=68.8
Q ss_pred CCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHH
Q 013142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTAR 157 (449)
Q Consensus 78 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~ 157 (449)
...+.+|+.+|- +.++|-..|+ ..+.|=.=..|+.=.|-- |-|.|.++.... +..+..+
T Consensus 58 ~~~~~lly~hGN----a~Dlgq~~~~-------------~~~l~~~ln~nv~~~DYS-GyG~S~G~psE~---n~y~Di~ 116 (258)
T KOG1552|consen 58 AAHPTLLYSHGN----AADLGQMVEL-------------FKELSIFLNCNVVSYDYS-GYGRSSGKPSER---NLYADIK 116 (258)
T ss_pred ccceEEEEcCCc----ccchHHHHHH-------------HHHHhhcccceEEEEecc-cccccCCCcccc---cchhhHH
Confidence 346999999977 2223322211 122233335667777866 999998876542 5566777
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 158 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
..+++|++ ++- +..+++|.|.|.|.. | +..+..+. + +.|+++-+|+++-
T Consensus 117 avye~Lr~---~~g--~~~~Iil~G~SiGt~--~--tv~Lasr~------~--~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 117 AVYEWLRN---RYG--SPERIILYGQSIGTV--P--TVDLASRY------P--LAAVVLHSPFTSG 165 (258)
T ss_pred HHHHHHHh---hcC--CCceEEEEEecCCch--h--hhhHhhcC------C--cceEEEeccchhh
Confidence 78888885 331 467899999999983 3 33333332 2 8999998887754
No 81
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.71 E-value=0.14 Score=49.88 Aligned_cols=68 Identities=22% Similarity=0.436 Sum_probs=52.1
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEe-CCeEEEEEEcCCccccc--ccChH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEY-GNLLTFVTVRGAAHMVP--YAQPS 424 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~-~n~Ltf~~V~~AGHmvP--~dqP~ 424 (449)
..+|+||+|..|-++|+..++..++++-.. . .+ ++|.++.+++|+.. ...|+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~------------------------G~a~-V~~~~~~~~~H~~~~~~~~~~ 273 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAA------------------------GGAD-VEYVRYPGGGHLGAAFASAPD 273 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHc------------------------CCCC-EEEEecCCCChhhhhhcCcHH
Confidence 689999999999999999999998885322 1 15 99999999999964 46776
Q ss_pred HHHHHHHHHhcCCCCCC
Q 013142 425 RALHLFSSFVHGRRLPN 441 (449)
Q Consensus 425 ~a~~mi~~fl~~~~~~~ 441 (449)
....|-++| .|++.++
T Consensus 274 a~~Wl~~rf-~G~~~~~ 289 (290)
T PF03583_consen 274 ALAWLDDRF-AGKPATS 289 (290)
T ss_pred HHHHHHHHH-CCCCCCC
Confidence 665555555 4666544
No 82
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.67 E-value=0.0028 Score=61.31 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=65.7
Q ss_pred CCCCeeEEecCCCChh-hhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhH
Q 013142 78 HEKPLTLWLNGGPGCS-SVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTA 156 (449)
Q Consensus 78 ~~~PlilWlnGGPG~S-S~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A 156 (449)
.+.|++|+++|-.|.. ..+.-.+ .+.+.-....|+|.||-+-+..-.|.. ...+...++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l----------------~~~ll~~~~~nVi~vD~~~~~~~~y~~----a~~~~~~v~ 93 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDL----------------RKAYLSRGDYNVIVVDWGRGANPNYPQ----AVNNTRVVG 93 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHH----------------HHHHHhcCCCEEEEEECccccccChHH----HHHhHHHHH
Confidence 4579999999987654 2211000 011111245899999987431111100 012334567
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 157 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
+++.++|+...+.. .....+++|+|+|+||+.+-.+|.++-+ +++.|+..+|.
T Consensus 94 ~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----------~v~~iv~LDPa 146 (275)
T cd00707 94 AELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----------ccceeEEecCC
Confidence 77777777766553 2334579999999999777777654321 37788886553
No 83
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.65 E-value=0.028 Score=61.96 Aligned_cols=134 Identities=20% Similarity=0.166 Sum_probs=75.4
Q ss_pred eEEEEEEEecC--CCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCC-cceEEEEcCCCccccc
Q 013142 65 SLFYYFVEAEV--EPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKA-SNLLFVESPAGVGWSY 141 (449)
Q Consensus 65 ~lFy~f~es~~--~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~-anlLfIDqPvGtGfSy 141 (449)
...+++.-..+ +.+.-||+++..|||++-+. .+.| .+..|.+.+.+. +=++.|| +-|+|+.-
T Consensus 509 ~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v-~~~~-------------~~~~~~~~~s~~g~~v~~vd-~RGs~~~G 573 (755)
T KOG2100|consen 509 TANAILILPPNFDPSKKYPLLVVVYGGPGSQSV-TSKF-------------SVDWNEVVVSSRGFAVLQVD-GRGSGGYG 573 (755)
T ss_pred EEEEEEecCCCCCCCCCCCEEEEecCCCCccee-eeeE-------------EecHHHHhhccCCeEEEEEc-CCCcCCcc
Confidence 45555553322 22456999999999993333 1111 122344433332 5677888 66888653
Q ss_pred cCC-CCCC-ccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCC
Q 013142 142 SNT-TSDY-NCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (449)
Q Consensus 142 ~~~-~~~~-~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng 219 (449)
-.- ...+ ...+ ...+|.....+.+.+.+ ..-...+.|+|-|||| +++..++...+. --+|.-+..+|
T Consensus 574 ~~~~~~~~~~lG~-~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGG----y~t~~~l~~~~~-----~~fkcgvavaP 642 (755)
T KOG2100|consen 574 WDFRSALPRNLGD-VEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGG----YLTLKLLESDPG-----DVFKCGVAVAP 642 (755)
T ss_pred hhHHHHhhhhcCC-cchHHHHHHHHHHHhcc-cccHHHeEEeccChHH----HHHHHHhhhCcC-----ceEEEEEEecc
Confidence 210 0000 1111 23455666666666655 3334469999999999 999998876531 22555466666
Q ss_pred CcCcc
Q 013142 220 LLRLD 224 (449)
Q Consensus 220 ~id~~ 224 (449)
++|..
T Consensus 643 Vtd~~ 647 (755)
T KOG2100|consen 643 VTDWL 647 (755)
T ss_pred eeeee
Confidence 66543
No 84
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=96.63 E-value=0.1 Score=57.69 Aligned_cols=87 Identities=13% Similarity=0.239 Sum_probs=52.2
Q ss_pred cCCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHH----HHH-------HCCCCCCCCeEEEecccccccHH
Q 013142 123 NKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMN----WYE-------KFPEFKSRELFLTGESYAGHYIP 191 (449)
Q Consensus 123 ~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~----F~~-------~fp~~~~~~~yi~GESYgG~yvP 191 (449)
.+=++++++|.+ |+|-|.+.-.. +...+.+.+.++.++|.. |.. +- .|.+-++-++|.||||
T Consensus 277 ~rGYaVV~~D~R-Gtg~SeG~~~~-~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq-~WsnGkVGm~G~SY~G---- 349 (767)
T PRK05371 277 PRGFAVVYVSGI-GTRGSDGCPTT-GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKA-DWSNGKVAMTGKSYLG---- 349 (767)
T ss_pred hCCeEEEEEcCC-CCCCCCCcCcc-CCHHHHHHHHHHHHHHhhCCcccccccccccccc-CCCCCeeEEEEEcHHH----
Confidence 345899999966 99999875322 112233334444444442 101 11 2334589999999999
Q ss_pred HHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 192 QLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 192 ~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
+++..+.... .-.||.|+-..|+.+
T Consensus 350 ~~~~~aAa~~------pp~LkAIVp~a~is~ 374 (767)
T PRK05371 350 TLPNAVATTG------VEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHHhhC------CCcceEEEeeCCCCc
Confidence 5555444332 234999998777655
No 85
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.49 E-value=0.026 Score=55.86 Aligned_cols=137 Identities=16% Similarity=0.199 Sum_probs=80.8
Q ss_pred CCeeEEEEEEEecC-CC-CCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCcc-CCcceEEEEcCCCcc
Q 013142 62 NGRSLFYYFVEAEV-EP-HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGVG 138 (449)
Q Consensus 62 ~~~~lFy~f~es~~-~~-~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~-~~anlLfIDqPvGtG 138 (449)
....++-+.|.... .+ +.+|++||++||=-|-+.- . -....+--++. ..+|.+-| .++
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~--~-------------~~~y~~~~~~~a~~~~~vvv----SVd 130 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA--N-------------SPAYDSFCTRLAAELNCVVV----SVD 130 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC--C-------------CchhHHHHHHHHHHcCeEEE----ecC
Confidence 44679999887643 33 5899999999995554420 0 00111112222 45555554 244
Q ss_pred ccccCCCCCCccCchhhHHHHHHHHHH-HHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEec
Q 013142 139 WSYSNTTSDYNCGDASTARDMHVFMMN-WYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIG 217 (449)
Q Consensus 139 fSy~~~~~~~~~~~~~~A~d~~~fL~~-F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iG 217 (449)
|--+ ....++..-++.-+.+.-++++ |.+..-..+ .++|+|.|-||..+-.+|.++.+.. ..++.|+|.++.
T Consensus 131 YRLA-PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~ili 203 (336)
T KOG1515|consen 131 YRLA-PEHPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQILI 203 (336)
T ss_pred cccC-CCCCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEEEE
Confidence 4332 2223333323333334444444 666554443 3999999999988888888887653 125789999997
Q ss_pred CCCcCcc
Q 013142 218 NPLLRLD 224 (449)
Q Consensus 218 ng~id~~ 224 (449)
-|+....
T Consensus 204 ~P~~~~~ 210 (336)
T KOG1515|consen 204 YPFFQGT 210 (336)
T ss_pred ecccCCC
Confidence 7776544
No 86
>COG0400 Predicted esterase [General function prediction only]
Probab=96.35 E-value=0.15 Score=47.04 Aligned_cols=59 Identities=24% Similarity=0.365 Sum_probs=44.3
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
+.||++.+|..|.+||..-+++..+.++.. +. + ..+.++. .||.++. +.+
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~-g~-----------------------~-v~~~~~~-~GH~i~~----e~~ 195 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTAS-GA-----------------------D-VEVRWHE-GGHEIPP----EEL 195 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHc-CC-----------------------C-EEEEEec-CCCcCCH----HHH
Confidence 799999999999999999998887775432 11 3 7777787 9999985 444
Q ss_pred HHHHHHhcC
Q 013142 428 HLFSSFVHG 436 (449)
Q Consensus 428 ~mi~~fl~~ 436 (449)
+.+++|+.+
T Consensus 196 ~~~~~wl~~ 204 (207)
T COG0400 196 EAARSWLAN 204 (207)
T ss_pred HHHHHHHHh
Confidence 445556654
No 87
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.27 E-value=0.017 Score=46.94 Aligned_cols=65 Identities=28% Similarity=0.417 Sum_probs=52.4
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
..+||+.++..|.++|+.+++...+.| ++ -..+++.++||-+....-.-+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l----------------------------~~-s~lvt~~g~gHg~~~~~s~C~~ 84 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL----------------------------PG-SRLVTVDGAGHGVYAGGSPCVD 84 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC----------------------------CC-ceEEEEeccCcceecCCChHHH
Confidence 489999999999999999999888872 24 4569999999999853334557
Q ss_pred HHHHHHhcCCCCCC
Q 013142 428 HLFSSFVHGRRLPN 441 (449)
Q Consensus 428 ~mi~~fl~~~~~~~ 441 (449)
+++.+|+....+|+
T Consensus 85 ~~v~~yl~~G~lP~ 98 (103)
T PF08386_consen 85 KAVDDYLLDGTLPA 98 (103)
T ss_pred HHHHHHHHcCCCCC
Confidence 78888888777874
No 88
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.16 E-value=0.046 Score=58.28 Aligned_cols=128 Identities=14% Similarity=0.114 Sum_probs=75.9
Q ss_pred CCeeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCc-cCCcceEEEEcCCCcccc
Q 013142 62 NGRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSW-NKASNLLFVESPAGVGWS 140 (449)
Q Consensus 62 ~~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW-~~~anlLfIDqPvGtGfS 140 (449)
.|..|+...+.-. +.+..|+||.++|--..+....+. + . ....-| .+-+.++-+|.+ |.|.|
T Consensus 5 DG~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~~~~--~------------~-~~~~~l~~~Gy~vv~~D~R-G~g~S 67 (550)
T TIGR00976 5 DGTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLRWGL--D------------K-TEPAWFVAQGYAVVIQDTR-GRGAS 67 (550)
T ss_pred CCCEEEEEEEecC-CCCCCCEEEEecCCCCchhhcccc--c------------c-ccHHHHHhCCcEEEEEecc-ccccC
Confidence 3457877666432 234689999999653322210000 0 0 001112 235889999988 99999
Q ss_pred ccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 141 YSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 141 y~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
.+.... .+ ...++|+.+++. |+.+.| +.+.++.++|+||||. ++..+.... +-.|++++..+++
T Consensus 68 ~g~~~~---~~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG~----~a~~~a~~~------~~~l~aiv~~~~~ 131 (550)
T TIGR00976 68 EGEFDL---LG-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLAV----TQLLAAVLQ------PPALRAIAPQEGV 131 (550)
T ss_pred CCceEe---cC-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHHH----HHHHHhccC------CCceeEEeecCcc
Confidence 754221 11 346667766666 555555 3345899999999994 444443332 2359999998887
Q ss_pred cC
Q 013142 221 LR 222 (449)
Q Consensus 221 id 222 (449)
.|
T Consensus 132 ~d 133 (550)
T TIGR00976 132 WD 133 (550)
T ss_pred cc
Confidence 65
No 89
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.97 E-value=0.021 Score=58.55 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=52.1
Q ss_pred CcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCC
Q 013142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 204 (449)
Q Consensus 125 ~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (449)
.+|+|-+|-| |-|-|.-... ..+...+|+++.++|+...... .+.-.+++|.|+|+|||.+-.+|.+.
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a---~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~------- 140 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTS---AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT------- 140 (442)
T ss_pred CCEEEEEECC-CcCCCCCccc---cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC-------
Confidence 4899999998 6564421111 1234567778888887654443 34456899999999998776666432
Q ss_pred CCceeeeeeeEecCC
Q 013142 205 KGFKFNIKGVAIGNP 219 (449)
Q Consensus 205 ~~~~inLkGi~iGng 219 (449)
+-.|..|++.||
T Consensus 141 ---p~rV~rItgLDP 152 (442)
T TIGR03230 141 ---KHKVNRITGLDP 152 (442)
T ss_pred ---CcceeEEEEEcC
Confidence 123778888666
No 90
>PLN00021 chlorophyllase
Probab=95.96 E-value=0.029 Score=55.32 Aligned_cols=114 Identities=14% Similarity=0.079 Sum_probs=62.6
Q ss_pred CCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhH
Q 013142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTA 156 (449)
Q Consensus 77 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A 156 (449)
..+.|+|++++|+.+.+.. +.-+.+. + -+| -..++.+|.+ | ++.... ..+.+.+
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~~-----------L----as~--G~~VvapD~~-g--~~~~~~-----~~~i~d~ 102 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQH-----------I----ASH--GFIVVAPQLY-T--LAGPDG-----TDEIKDA 102 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHHH-----------H----HhC--CCEEEEecCC-C--cCCCCc-----hhhHHHH
Confidence 4568999999999776554 2222210 0 011 2466777766 4 221111 1222345
Q ss_pred HHHHHHHHHHHHH-CC---CCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 157 RDMHVFMMNWYEK-FP---EFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 157 ~d~~~fL~~F~~~-fp---~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
.++.+++.+-++. .| +....+++|+|+|+||..+-.+|.+..+.. ....+++++..+++.
T Consensus 103 ~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~ 166 (313)
T PLN00021 103 AAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVD 166 (313)
T ss_pred HHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeecccc
Confidence 5666666654432 12 233457999999999955555554322211 134688988877754
No 91
>PRK10162 acetyl esterase; Provisional
Probab=95.94 E-value=0.031 Score=55.22 Aligned_cols=62 Identities=16% Similarity=0.106 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 157 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
.+.++++.+...++ .....+++|+|+|.||+.+-.++.++.+... ....++++++..|+++.
T Consensus 136 ~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 136 VAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 33444554444333 2234579999999999877777766544321 12457899998888764
No 92
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.79 E-value=0.072 Score=51.21 Aligned_cols=118 Identities=20% Similarity=0.243 Sum_probs=79.8
Q ss_pred CCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCC-----CCCccCchh
Q 013142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTT-----SDYNCGDAS 154 (449)
Q Consensus 80 ~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~-----~~~~~~~~~ 154 (449)
+++++|+-|-||.-+. |--|.+ .|..+- +....++=|.. .|+|..... +.-..+-++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGISH---AGHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEecC---CCCcCCcccccccCCCCccCHHH
Confidence 5899999999999888 454442 122111 45566666663 344443332 122346677
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 155 ~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
+.+.-.+||+++....+ ..+.+++|.|||-|+ +++.+++++.. ....+++++++-=|.+.-
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl~r~~---~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVLKRLP---DLKFRVKKVILLFPTIED 124 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHHHhcc---ccCCceeEEEEeCCcccc
Confidence 88888899999887664 236789999999999 99999999875 124677777776665543
No 93
>COG1647 Esterase/lipase [General function prediction only]
Probab=95.62 E-value=0.32 Score=44.76 Aligned_cols=62 Identities=18% Similarity=0.310 Sum_probs=47.6
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccC-hHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ-PSRA 426 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dq-P~~a 426 (449)
..+++|..|..|-++|..+++...+.+... . =.+.++.++||.+-.|. .+..
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~--------------------------~-KeL~~~e~SgHVIt~D~Erd~v 233 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVESD--------------------------D-KELKWLEGSGHVITLDKERDQV 233 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhccCC--------------------------c-ceeEEEccCCceeecchhHHHH
Confidence 579999999999999999999888873211 1 22367889999999885 5566
Q ss_pred HHHHHHHhcC
Q 013142 427 LHLFSSFVHG 436 (449)
Q Consensus 427 ~~mi~~fl~~ 436 (449)
.+-+-+|+.+
T Consensus 234 ~e~V~~FL~~ 243 (243)
T COG1647 234 EEDVITFLEK 243 (243)
T ss_pred HHHHHHHhhC
Confidence 6777778753
No 94
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=95.10 E-value=0.21 Score=50.33 Aligned_cols=109 Identities=24% Similarity=0.308 Sum_probs=70.3
Q ss_pred CCCCCeeEEecCCCChhhhh-----hhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccC
Q 013142 77 PHEKPLTLWLNGGPGCSSVG-----GGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCG 151 (449)
Q Consensus 77 ~~~~PlilWlnGGPG~SS~~-----~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~ 151 (449)
..++|+++.+.|=.|.|.-. ....++.| +++ ++-| +-|.|-|--+++.-|...
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~------VVfN---------------~RG~~g~~LtTpr~f~ag 179 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV------VVFN---------------HRGLGGSKLTTPRLFTAG 179 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE------EEEC---------------CCCCCCCccCCCceeecC
Confidence 46789999999999988642 33444555 332 1112 559888887766655333
Q ss_pred chhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 152 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 152 ~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
.. +|+-++++---++|| .+++|.+|.|+||.. +..++-+..++ .+ =..|++|-|||
T Consensus 180 ~t---~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~~---~~-l~~a~~v~~Pw 235 (409)
T KOG1838|consen 180 WT---EDLREVVNHIKKRYP---QAPLFAVGFSMGGNI---LTNYLGEEGDN---TP-LIAAVAVCNPW 235 (409)
T ss_pred CH---HHHHHHHHHHHHhCC---CCceEEEEecchHHH---HHHHhhhccCC---CC-ceeEEEEeccc
Confidence 33 345455555557898 569999999999943 44455444322 12 26789999997
No 95
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.06 E-value=0.064 Score=49.77 Aligned_cols=77 Identities=17% Similarity=0.135 Sum_probs=52.5
Q ss_pred CcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCC
Q 013142 125 ASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS 204 (449)
Q Consensus 125 ~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (449)
..++..|+.| |.+- ......+.++.|+...+.|+ ...|+ .|++|+|.|+||..+=.+|.++.++.
T Consensus 27 ~~~v~~i~~~-~~~~-----~~~~~~si~~la~~y~~~I~---~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G--- 91 (229)
T PF00975_consen 27 VIGVYGIEYP-GRGD-----DEPPPDSIEELASRYAEAIR---ARQPE---GPYVLAGWSFGGILAFEMARQLEEAG--- 91 (229)
T ss_dssp EEEEEEECST-TSCT-----TSHEESSHHHHHHHHHHHHH---HHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT---
T ss_pred eEEEEEEecC-CCCC-----CCCCCCCHHHHHHHHHHHhh---hhCCC---CCeeehccCccHHHHHHHHHHHHHhh---
Confidence 3678889988 6651 11123466677777776665 34442 39999999999977777777776653
Q ss_pred CCceeeeeeeEecCCC
Q 013142 205 KGFKFNIKGVAIGNPL 220 (449)
Q Consensus 205 ~~~~inLkGi~iGng~ 220 (449)
..++.+++.|+.
T Consensus 92 ----~~v~~l~liD~~ 103 (229)
T PF00975_consen 92 ----EEVSRLILIDSP 103 (229)
T ss_dssp -----SESEEEEESCS
T ss_pred ----hccCceEEecCC
Confidence 447889997754
No 96
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.98 E-value=0.18 Score=46.22 Aligned_cols=120 Identities=22% Similarity=0.321 Sum_probs=74.6
Q ss_pred eEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCC
Q 013142 65 SLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNT 144 (449)
Q Consensus 65 ~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~ 144 (449)
.|.=|...+++ .+|.+|.++|--| -| |.+.-+- .-.==+-..||+-||-- |-|.|.+..
T Consensus 66 tL~a~~~~~E~---S~pTlLyfh~NAG--Nm--Ghr~~i~-------------~~fy~~l~mnv~ivsYR-GYG~S~Gsp 124 (300)
T KOG4391|consen 66 TLDAYLMLSES---SRPTLLYFHANAG--NM--GHRLPIA-------------RVFYVNLKMNVLIVSYR-GYGKSEGSP 124 (300)
T ss_pred eEeeeeecccC---CCceEEEEccCCC--cc--cchhhHH-------------HHHHHHcCceEEEEEee-ccccCCCCc
Confidence 44444443332 7899999997765 23 4433110 01111345799999977 999998765
Q ss_pred CCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 145 TSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 145 ~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
...--..|.++| ..++-..|...+++++++|.|-||-- |.++...| .-.+.++++-|-+++
T Consensus 125 sE~GL~lDs~av-------ldyl~t~~~~dktkivlfGrSlGGAv----ai~lask~------~~ri~~~ivENTF~S 185 (300)
T KOG4391|consen 125 SEEGLKLDSEAV-------LDYLMTRPDLDKTKIVLFGRSLGGAV----AIHLASKN------SDRISAIIVENTFLS 185 (300)
T ss_pred cccceeccHHHH-------HHHHhcCccCCcceEEEEecccCCee----EEEeeccc------hhheeeeeeechhcc
Confidence 432222333333 23445778888899999999999944 44444444 234889999888765
No 97
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=94.73 E-value=0.44 Score=47.07 Aligned_cols=53 Identities=19% Similarity=0.125 Sum_probs=33.7
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccC-hHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ-PSRA 426 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dq-P~~a 426 (449)
..+|++-.|-.|.+||..++-..-++++. . =...+.+..||-.+.+. -+..
T Consensus 262 ~~pvl~~~gl~D~~cPP~t~fA~yN~i~~---------------------------~-K~l~vyp~~~He~~~~~~~~~~ 313 (320)
T PF05448_consen 262 KCPVLFSVGLQDPVCPPSTQFAAYNAIPG---------------------------P-KELVVYPEYGHEYGPEFQEDKQ 313 (320)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHCC--S---------------------------S-EEEEEETT--SSTTHHHHHHHH
T ss_pred CCCEEEEEecCCCCCCchhHHHHHhccCC---------------------------C-eeEEeccCcCCCchhhHHHHHH
Confidence 68999999999999999998877776431 1 23477888999876544 4444
Q ss_pred HH
Q 013142 427 LH 428 (449)
Q Consensus 427 ~~ 428 (449)
+.
T Consensus 314 ~~ 315 (320)
T PF05448_consen 314 LN 315 (320)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 98
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=94.50 E-value=0.026 Score=56.97 Aligned_cols=82 Identities=20% Similarity=0.254 Sum_probs=52.0
Q ss_pred CCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccC
Q 013142 124 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 203 (449)
Q Consensus 124 ~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 203 (449)
.-.+||=||-| |||+|.... + + +....++..+-.|+...|+.-...+.++|-|.||.|++.+|.- +
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l--~--~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l--e---- 282 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---L--T--QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAAL--E---- 282 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S-----S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH--T----
T ss_pred CCCEEEEEccC-CCcccccCC---C--C--cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHh--c----
Confidence 34579999999 999985322 1 1 1123456667777888898888889999999999888877742 1
Q ss_pred CCCceeeeeeeEecCCCcCc
Q 013142 204 SKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 204 ~~~~~inLkGi~iGng~id~ 223 (449)
.-.||+++.-.|.++.
T Consensus 283 ----~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 283 ----DPRLKAVVALGAPVHH 298 (411)
T ss_dssp ----TTT-SEEEEES---SC
T ss_pred ----ccceeeEeeeCchHhh
Confidence 1238887776665543
No 99
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=94.17 E-value=0.57 Score=45.08 Aligned_cols=93 Identities=13% Similarity=0.205 Sum_probs=50.9
Q ss_pred ccCCcceEEEEcCCCccccccCCCCCC-ccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHh
Q 013142 122 WNKASNLLFVESPAGVGWSYSNTTSDY-NCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (449)
Q Consensus 122 W~~~anlLfIDqPvGtGfSy~~~~~~~-~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (449)
-.++.-++=||.| |-..--..-+.+| ..+.++.|+++-+.|..| .+ +.+.-.|+--|+.....+|. +.
T Consensus 52 i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-----~l--k~vIg~GvGAGAnIL~rfAl---~~ 120 (283)
T PF03096_consen 52 ILQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-----GL--KSVIGFGVGAGANILARFAL---KH 120 (283)
T ss_dssp HHTTSEEEEEE-T-TTSTT-----TT-----HHHHHCTHHHHHHHH-----T-----EEEEEETHHHHHHHHHHH---HS
T ss_pred HhhceEEEEEeCC-CCCCCcccccccccccCHHHHHHHHHHHHHhC-----Cc--cEEEEEeeccchhhhhhccc---cC
Confidence 5567788889988 7765433323333 346778888888887755 33 45999999888855555553 22
Q ss_pred ccCCCCceeeeeeeEecCCCcCcccchhhHHHHHHh
Q 013142 201 NAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWS 236 (449)
Q Consensus 201 n~~~~~~~inLkGi~iGng~id~~~~~~~~~~~~~~ 236 (449)
+-.+-|+++.|+. ....++.+.+++
T Consensus 121 -------p~~V~GLiLvn~~----~~~~gw~Ew~~~ 145 (283)
T PF03096_consen 121 -------PERVLGLILVNPT----CTAAGWMEWFYQ 145 (283)
T ss_dssp -------GGGEEEEEEES-------S---HHHHHHH
T ss_pred -------ccceeEEEEEecC----CCCccHHHHHHH
Confidence 2338899996654 344555555543
No 100
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.90 E-value=3.8 Score=42.87 Aligned_cols=87 Identities=18% Similarity=0.312 Sum_probs=63.4
Q ss_pred HHHHHHHhcCCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccc
Q 013142 339 PVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV 418 (449)
Q Consensus 339 ~~l~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmv 418 (449)
+.|....++|=|+|+|+|..|.+++..++.++-+++...++-. ... ...-..|..|+|.||--
T Consensus 344 pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~-~~~----------------v~dF~RlF~vPGm~HC~ 406 (474)
T PF07519_consen 344 PDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGA-LAD----------------VDDFYRLFMVPGMGHCG 406 (474)
T ss_pred cCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccc-ccc----------------ccceeEEEecCCCcccC
Confidence 4566666789999999999999999999999988875443221 000 01116678999999985
Q ss_pred --cccChHHHHHHHHHHhcCCCCCCC
Q 013142 419 --PYAQPSRALHLFSSFVHGRRLPNN 442 (449)
Q Consensus 419 --P~dqP~~a~~mi~~fl~~~~~~~~ 442 (449)
|-..|-.++..|.+|+.+..-|+.
T Consensus 407 gG~g~~~~d~l~aL~~WVE~G~AP~~ 432 (474)
T PF07519_consen 407 GGPGPDPFDALTALVDWVENGKAPET 432 (474)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCCe
Confidence 444666788888889987666643
No 101
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.82 E-value=0.27 Score=51.54 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHH
Q 013142 156 ARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIP 191 (449)
Q Consensus 156 A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP 191 (449)
.....+++++-...|. -..+++.|+|||+||+-+-
T Consensus 157 ~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~ 191 (493)
T cd00312 157 QRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVS 191 (493)
T ss_pred HHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhh
Confidence 3345567777776664 3456899999999995443
No 102
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=92.44 E-value=0.72 Score=42.93 Aligned_cols=27 Identities=30% Similarity=0.492 Sum_probs=23.3
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIREL 374 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l 374 (449)
+++++|++|+.|..|+....++.++..
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 678999999999999999888777664
No 103
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=91.42 E-value=2.2 Score=45.20 Aligned_cols=109 Identities=21% Similarity=0.287 Sum_probs=69.0
Q ss_pred CCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCC----------cceEEEEcCCCccccccCCCCC
Q 013142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKA----------SNLLFVESPAGVGWSYSNTTSD 147 (449)
Q Consensus 78 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~----------anlLfIDqPvGtGfSy~~~~~~ 147 (449)
+.-|++|.+-||||.- ++.|.++|.+. .=|++||.- |+- ...-.
T Consensus 640 kkYptvl~VYGGP~VQ---------------------lVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~----hRGlk 693 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQ---------------------LVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSA----HRGLK 693 (867)
T ss_pred CCCceEEEEcCCCceE---------------------EeeccccceehhhhhhhhhcceEEEEEcCC-Ccc----ccchh
Confidence 3479999999999743 45588888764 346899954 321 01101
Q ss_pred C------ccCchhhHHHHHHHHHHHHHHCCCCC-CCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 148 Y------NCGDASTARDMHVFMMNWYEKFPEFK-SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 148 ~------~~~~~~~A~d~~~fL~~F~~~fp~~~-~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
+ .... -.++|-++.||-..++.- |- -..+-|-|-|||| +|+...+.+.. .| ++-.+-|.|+
T Consensus 694 FE~~ik~kmGq-VE~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGG----YLSlm~L~~~P-----~I-frvAIAGapV 761 (867)
T KOG2281|consen 694 FESHIKKKMGQ-VEVEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGG----YLSLMGLAQYP-----NI-FRVAIAGAPV 761 (867)
T ss_pred hHHHHhhccCe-eeehhhHHHHHHHHHhcC-cccchheeEecccccc----HHHHHHhhcCc-----ce-eeEEeccCcc
Confidence 1 1111 124555667776666643 33 2359999999999 89888777643 22 6677778888
Q ss_pred cCcc
Q 013142 221 LRLD 224 (449)
Q Consensus 221 id~~ 224 (449)
++..
T Consensus 762 T~W~ 765 (867)
T KOG2281|consen 762 TDWR 765 (867)
T ss_pred eeee
Confidence 7764
No 104
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=90.77 E-value=2.2 Score=41.68 Aligned_cols=46 Identities=24% Similarity=0.247 Sum_probs=36.6
Q ss_pred CCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCccc
Q 013142 174 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 225 (449)
Q Consensus 174 ~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~ 225 (449)
..+.+.|+|+|-||+-+..++....++. ...+++.++..|++|...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 3567999999999988888888776652 244788899899988765
No 105
>PLN02454 triacylglycerol lipase
Probab=90.63 E-value=0.78 Score=46.51 Aligned_cols=68 Identities=16% Similarity=0.273 Sum_probs=49.6
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
..+.+++...|++..+++|..+. .++|+|||.||-.+-..|..|...... ...++++.+..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 35678899999999999987542 599999999997666666666554211 124567788999887754
No 106
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=90.36 E-value=0.86 Score=44.81 Aligned_cols=98 Identities=21% Similarity=0.246 Sum_probs=58.5
Q ss_pred CCCCCCCeeEEecCCCChhhhhhhhhhcc-CCceecCCCCceeeccCCcc-----CCcceEEEEcCCCccccccCCCCCC
Q 013142 75 VEPHEKPLTLWLNGGPGCSSVGGGAFTEL-GPFYPRGDGRGLRRNSMSWN-----KASNLLFVESPAGVGWSYSNTTSDY 148 (449)
Q Consensus 75 ~~~~~~PlilWlnGGPG~SS~~~g~f~E~-GP~~i~~~~~~~~~N~~sW~-----~~anlLfIDqPvGtGfSy~~~~~~~ 148 (449)
.+++++--+|+.||- |.+.|+ .= +..-...|. ..+|+|..--| |||+|.+..
T Consensus 132 ~~a~~~RWiL~s~GN--------g~~~E~~~~---------~~~~~~~~~~~ak~~~aNvl~fNYp-GVg~S~G~~---- 189 (365)
T PF05677_consen 132 PEAKPQRWILVSNGN--------GECYENRAM---------LDYKDDWIQRFAKELGANVLVFNYP-GVGSSTGPP---- 189 (365)
T ss_pred CCCCCCcEEEEEcCC--------hHHhhhhhh---------hccccHHHHHHHHHcCCcEEEECCC-ccccCCCCC----
Confidence 456788899999976 223332 00 000111232 46899999999 999997653
Q ss_pred ccCchhhHHHHHHHHHHHHHHCC-CCCCCCeEEEecccccccHHHHHHHHHHhc
Q 013142 149 NCGDASTARDMHVFMMNWYEKFP-EFKSRELFLTGESYAGHYIPQLADVLLDHN 201 (449)
Q Consensus 149 ~~~~~~~A~d~~~fL~~F~~~fp-~~~~~~~yi~GESYgG~yvP~la~~i~~~n 201 (449)
+-++...+. +++-+++...+ .-+.+.+.+.|+|-|| .++.+-++++
T Consensus 190 --s~~dLv~~~-~a~v~yL~d~~~G~ka~~Ii~yG~SLGG----~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 --SRKDLVKDY-QACVRYLRDEEQGPKAKNIILYGHSLGG----GVQAEALKKE 236 (365)
T ss_pred --CHHHHHHHH-HHHHHHHHhcccCCChheEEEeeccccH----HHHHHHHHhc
Confidence 222333332 33444444333 3355789999999999 6666655554
No 107
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=90.29 E-value=0.62 Score=39.48 Aligned_cols=63 Identities=24% Similarity=0.312 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
...+.+.+.|++..+++| +..+.|+|||-||-.+..+|..+.++... ...+++-+..|.|-+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCcccc
Confidence 445567778888888887 46799999999998888888888776432 1466888888888663
No 108
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=90.02 E-value=0.83 Score=47.13 Aligned_cols=95 Identities=17% Similarity=0.165 Sum_probs=59.3
Q ss_pred cceEEEEcCCCccccccCC-----CCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHh
Q 013142 126 SNLLFVESPAGVGWSYSNT-----TSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (449)
Q Consensus 126 anlLfIDqPvGtGfSy~~~-----~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (449)
|-||+++.- =-|-|.... .-. --+.+++-.|+..|++.+-.++....+.|+.++|-|||| .||..+...
T Consensus 60 a~~v~lEHR-yYG~S~P~~~~s~~nL~-yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G----~Laaw~r~k 133 (434)
T PF05577_consen 60 ALVVALEHR-YYGKSQPFGDLSTENLR-YLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGG----ALAAWFRLK 133 (434)
T ss_dssp EEEEEE--T-TSTTB-TTGGGGGSTTT-C-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHH----HHHHHHHHH
T ss_pred CcEEEeehh-hhcCCCCccccchhhHH-hcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchh----HHHHHHHhh
Confidence 556666644 444444211 111 246778889999999999888876677899999999999 899888776
Q ss_pred ccCCCCceeeeeeeEecCCCcCcccchhhHHH
Q 013142 201 NAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYE 232 (449)
Q Consensus 201 n~~~~~~~inLkGi~iGng~id~~~~~~~~~~ 232 (449)
... + +.|.+--++.+....++..|.+
T Consensus 134 yP~-----~-~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 134 YPH-----L-FDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp -TT-----T--SEEEEET--CCHCCTTTHHHH
T ss_pred CCC-----e-eEEEEeccceeeeecccHHHHH
Confidence 432 2 5677777777777666655554
No 109
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=89.40 E-value=1 Score=39.01 Aligned_cols=59 Identities=15% Similarity=0.179 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 155 ~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
.++++...+++...++| ..+++|+|+|.||..+-.+|..+.++.. .-..+-+..|.|-+
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~ 68 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCcc
Confidence 44555566666666667 4579999999999888888888766431 12345555655543
No 110
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=89.19 E-value=0.64 Score=42.40 Aligned_cols=63 Identities=21% Similarity=0.254 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHHHHH---CCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 154 STARDMHVFMMNWYEK---FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~---fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
+..+|+.++++-..+. + .+...+++|+|+|-||+.+-.++..+.+... ..++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRGL------PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTTT------CHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhcc------cchhhhhcccccccc
Confidence 4455555555544432 2 2445689999999999998888877776531 239999999998876
No 111
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=89.14 E-value=1.4 Score=40.07 Aligned_cols=61 Identities=13% Similarity=0.095 Sum_probs=46.5
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
..++||.+|..|..|+-... -||..+.. . -.+......+|.....-|+.-.
T Consensus 216 kcPtli~hG~kDp~~~~~hv-~fi~~~~~---------------------------~-a~~~~~peGkHn~hLrya~eFn 266 (277)
T KOG2984|consen 216 KCPTLIMHGGKDPFCGDPHV-CFIPVLKS---------------------------L-AKVEIHPEGKHNFHLRYAKEFN 266 (277)
T ss_pred cCCeeEeeCCcCCCCCCCCc-cchhhhcc---------------------------c-ceEEEccCCCcceeeechHHHH
Confidence 78999999999999987655 35544210 1 2234567899999999999999
Q ss_pred HHHHHHhcCC
Q 013142 428 HLFSSFVHGR 437 (449)
Q Consensus 428 ~mi~~fl~~~ 437 (449)
.++..|++..
T Consensus 267 klv~dFl~~~ 276 (277)
T KOG2984|consen 267 KLVLDFLKST 276 (277)
T ss_pred HHHHHHHhcc
Confidence 9999998764
No 112
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=88.82 E-value=1.4 Score=48.64 Aligned_cols=97 Identities=14% Similarity=0.165 Sum_probs=57.1
Q ss_pred CCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccC---------CCCC--
Q 013142 79 EKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSN---------TTSD-- 147 (449)
Q Consensus 79 ~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~---------~~~~-- 147 (449)
..|+|++++|=.|....+ -.+.+ .+. .+-..++-+|.| |.|-|... ..+.
T Consensus 448 g~P~VVllHG~~g~~~~~-~~lA~-----------~La------~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENA-LAFAG-----------TLA------AAGVATIAIDHP-LHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHHH-HHHHH-----------HHH------hCCcEEEEeCCC-CCCccccccccccccccccCccc
Confidence 358999999977776652 22111 010 022458889988 99988322 1111
Q ss_pred C-c--------cCchhhHHHHHHHHHHHH------H---HCCCCCCCCeEEEecccccccHHHHH
Q 013142 148 Y-N--------CGDASTARDMHVFMMNWY------E---KFPEFKSRELFLTGESYAGHYIPQLA 194 (449)
Q Consensus 148 ~-~--------~~~~~~A~d~~~fL~~F~------~---~fp~~~~~~~yi~GESYgG~yvP~la 194 (449)
| . .+-.+.+.|+.......- . .+..+...++++.|||.||..+..++
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~ 573 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFI 573 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHH
Confidence 1 1 134566677765554432 1 12335567999999999996665555
No 113
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=88.37 E-value=1.1 Score=41.66 Aligned_cols=60 Identities=17% Similarity=0.191 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 155 ~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
..+++...++...+++| +.+++++|||.||-.+-.+|..+.++. ...+++.+..|.|-+.
T Consensus 110 ~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 110 LYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCC
Confidence 33445566666666666 457999999999988877777776653 1355888999888763
No 114
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=87.70 E-value=3.4 Score=48.77 Aligned_cols=103 Identities=11% Similarity=0.089 Sum_probs=65.4
Q ss_pred CCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHHHH
Q 013142 80 KPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDM 159 (449)
Q Consensus 80 ~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~ 159 (449)
.|-++.++|+.|.+.. +..+.+ .......++-+|.| |.|-+.. ...+.++.|+++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~------------------~l~~~~~v~~~~~~-g~~~~~~-----~~~~l~~la~~~ 1122 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSR------------------YLDPQWSIYGIQSP-RPDGPMQ-----TATSLDEVCEAH 1122 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHH------------------hcCCCCcEEEEECC-CCCCCCC-----CCCCHHHHHHHH
Confidence 4668889999887766 333221 01234677888988 7764421 123666777777
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 160 ~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
.+.++. ..| ..++++.|+|+||.-+-.+|.++.++. ..+..+++.+++
T Consensus 1123 ~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-------~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1123 LATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG-------EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC-------CceeEEEEecCC
Confidence 777764 222 358999999999977777776665442 346666665553
No 115
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=86.84 E-value=1.1 Score=41.09 Aligned_cols=40 Identities=18% Similarity=0.247 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHh
Q 013142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (449)
Q Consensus 155 ~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (449)
.-.|+.++...|++.+++ +|||+|+|||=|+ .+..+|+++
T Consensus 76 ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs----~~l~~LL~e 115 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNN--GRPFILAGHSQGS----MHLLRLLKE 115 (207)
T ss_pred hHHHHHHHHHHHHHhcCC--CCCEEEEEeChHH----HHHHHHHHH
Confidence 346777888889988864 8999999999999 555555554
No 116
>COG4099 Predicted peptidase [General function prediction only]
Probab=86.55 E-value=6.8 Score=37.90 Aligned_cols=31 Identities=10% Similarity=0.137 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeccccccc
Q 013142 159 MHVFMMNWYEKFPEFKSRELFLTGESYAGHY 189 (449)
Q Consensus 159 ~~~fL~~F~~~fp~~~~~~~yi~GESYgG~y 189 (449)
..+.+.+-+...+..-.+.+|+.|-|-||.-
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~g 282 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFG 282 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchh
Confidence 3344554444566666778999999999944
No 117
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=86.36 E-value=3.9 Score=41.93 Aligned_cols=35 Identities=17% Similarity=0.018 Sum_probs=24.2
Q ss_pred CCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 176 RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 176 ~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
....|+|.|||| ..|.++.-++ +-.+.+++..+|.
T Consensus 288 ~~~~IaG~S~GG----l~AL~~al~~------Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 288 DRTVVAGQSFGG----LAALYAGLHW------PERFGCVLSQSGS 322 (411)
T ss_pred cceEEEEEChHH----HHHHHHHHhC------cccccEEEEeccc
Confidence 358999999999 6666665443 2236777776664
No 118
>PLN02571 triacylglycerol lipase
Probab=85.76 E-value=2.7 Score=42.74 Aligned_cols=69 Identities=10% Similarity=0.064 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccC----CCCceeeeeeeEecCCCcCc
Q 013142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH----SKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~----~~~~~inLkGi~iGng~id~ 223 (449)
.+.+++.+.|+.+.+++|.. ..+++|+|||.||-.+-..|..|....-. .....+++..+..|.|-+..
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 45678889999999988865 34699999999997777777777543110 01123567778888887653
No 119
>PF03283 PAE: Pectinacetylesterase
Probab=85.35 E-value=8.4 Score=38.75 Aligned_cols=148 Identities=21% Similarity=0.209 Sum_probs=75.7
Q ss_pred eeEEEEEEEecCCCCCCCeeEEecCCCChhhhh---hhhhhccCCce-----ecCCC---CceeeccCCccCCcceEEEE
Q 013142 64 RSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVG---GGAFTELGPFY-----PRGDG---RGLRRNSMSWNKASNLLFVE 132 (449)
Q Consensus 64 ~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~---~g~f~E~GP~~-----i~~~~---~~~~~N~~sW~~~anlLfID 132 (449)
+.-.|++.+. .....+-+||.|+||=-|.+.. .-...++|-.. +..+| ..-..||.=+ ..|++||=
T Consensus 35 S~~~yy~~~g-~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~vp 111 (361)
T PF03283_consen 35 SPPGYYFRPG-SGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFVP 111 (361)
T ss_pred CCCcEEEccC-CCCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEEE
Confidence 3344555544 2345678999999997787752 01122344221 11111 1123455222 26788884
Q ss_pred cCCCccccccCCCCCCccCc---hhh-HHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCc
Q 013142 133 SPAGVGWSYSNTTSDYNCGD---AST-ARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGF 207 (449)
Q Consensus 133 qPvGtGfSy~~~~~~~~~~~---~~~-A~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~ 207 (449)
--+|-++.-+........ --. .+.+.+.|.....+ +++ ...+.|+|.|-||.-+..-+.++.+.-..
T Consensus 112 --YC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~---- 183 (361)
T PF03283_consen 112 --YCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS---- 183 (361)
T ss_pred --ecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc----
Confidence 455555532211110011 011 33344455555555 554 34799999999997777777777665432
Q ss_pred eeeeeeeEecCCCcC
Q 013142 208 KFNIKGVAIGNPLLR 222 (449)
Q Consensus 208 ~inLkGi~iGng~id 222 (449)
..+++++.=..-++|
T Consensus 184 ~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 184 SVKVKCLSDSGFFLD 198 (361)
T ss_pred CceEEEecccccccc
Confidence 244555444433444
No 120
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.00 E-value=4.6 Score=38.06 Aligned_cols=116 Identities=19% Similarity=0.323 Sum_probs=60.5
Q ss_pred CCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCccCchhhHH
Q 013142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTAR 157 (449)
Q Consensus 78 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~ 157 (449)
+++|+++|+-|-||-++. .+|.|=-....-..+ ..-|+-....+ .+.|.-+=-+......+ -.+-+++.+
T Consensus 27 ~~~~li~~IpGNPG~~gF----Y~~F~~~L~~~l~~r--~~~wtIsh~~H---~~~P~sl~~~~s~~~~e-ifsL~~QV~ 96 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF----YTEFARHLHLNLIDR--LPVWTISHAGH---ALMPASLREDHSHTNEE-IFSLQDQVD 96 (301)
T ss_pred CCceEEEEecCCCCchhH----HHHHHHHHHHhcccc--cceeEEecccc---ccCCccccccccccccc-ccchhhHHH
Confidence 789999999999997765 444432111100000 01122222222 23341111111111001 123344555
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEe
Q 013142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAI 216 (449)
Q Consensus 158 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~i 216 (449)
.=.+|++++. | +++++||.|+|=|. ++..+|+..++. ..+++-..+
T Consensus 97 HKlaFik~~~---P--k~~ki~iiGHSiGa----Ym~Lqil~~~k~----~~~vqKa~~ 142 (301)
T KOG3975|consen 97 HKLAFIKEYV---P--KDRKIYIIGHSIGA----YMVLQILPSIKL----VFSVQKAVL 142 (301)
T ss_pred HHHHHHHHhC---C--CCCEEEEEecchhH----HHHHHHhhhccc----ccceEEEEE
Confidence 5567777554 3 46789999999998 889998887543 344554444
No 121
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=84.79 E-value=1.4 Score=40.00 Aligned_cols=51 Identities=24% Similarity=0.365 Sum_probs=33.6
Q ss_pred HHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcccch
Q 013142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDV 227 (449)
Q Consensus 161 ~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~~~ 227 (449)
+.+.+.++.. ....+.|.|-|.||.|+-.+|.+. +++. ++.||.+.|....
T Consensus 47 ~~l~~~i~~~---~~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 47 AQLEQLIEEL---KPENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred HHHHHHHHhC---CCCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHH
Confidence 3444444433 344599999999997777666432 3555 6779998886544
No 122
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=84.35 E-value=4.2 Score=36.25 Aligned_cols=77 Identities=14% Similarity=0.125 Sum_probs=47.4
Q ss_pred CCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccC
Q 013142 124 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH 203 (449)
Q Consensus 124 ~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 203 (449)
...+++.+|.| |.|.+... ..+.+..++.....++ ...+ ..+++++|+|+||.-+-.+|.++.++.
T Consensus 24 ~~~~v~~~~~~-g~~~~~~~-----~~~~~~~~~~~~~~l~---~~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~-- 89 (212)
T smart00824 24 GRRDVSALPLP-GFGPGEPL-----PASADALVEAQAEAVL---RAAG---GRPFVLVGHSSGGLLAHAVAARLEARG-- 89 (212)
T ss_pred CCccEEEecCC-CCCCCCCC-----CCCHHHHHHHHHHHHH---HhcC---CCCeEEEEECHHHHHHHHHHHHHHhCC--
Confidence 34678899977 77654321 1233444554444444 2333 468999999999977777777766542
Q ss_pred CCCceeeeeeeEecCC
Q 013142 204 SKGFKFNIKGVAIGNP 219 (449)
Q Consensus 204 ~~~~~inLkGi~iGng 219 (449)
..++++++.+.
T Consensus 90 -----~~~~~l~~~~~ 100 (212)
T smart00824 90 -----IPPAAVVLLDT 100 (212)
T ss_pred -----CCCcEEEEEcc
Confidence 23566766554
No 123
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=83.83 E-value=1.4 Score=42.26 Aligned_cols=83 Identities=17% Similarity=0.136 Sum_probs=51.7
Q ss_pred cceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCC
Q 013142 126 SNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 205 (449)
Q Consensus 126 anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (449)
+.+|.+|.- |+|-|.+.-.. .....++|.++.|. |+.+.|- .+-++-++|.||+|...-..|. .+
T Consensus 58 Y~vV~~D~R-G~g~S~G~~~~----~~~~e~~D~~d~I~-W~~~Qpw-s~G~VGm~G~SY~G~~q~~~A~----~~---- 122 (272)
T PF02129_consen 58 YAVVVQDVR-GTGGSEGEFDP----MSPNEAQDGYDTIE-WIAAQPW-SNGKVGMYGISYGGFTQWAAAA----RR---- 122 (272)
T ss_dssp -EEEEEE-T-TSTTS-S-B-T----TSHHHHHHHHHHHH-HHHHCTT-EEEEEEEEEETHHHHHHHHHHT----TT----
T ss_pred CEEEEECCc-ccccCCCcccc----CChhHHHHHHHHHH-HHHhCCC-CCCeEEeeccCHHHHHHHHHHh----cC----
Confidence 678999955 99999865322 13445566655443 6655654 3347999999999966555543 11
Q ss_pred CceeeeeeeEecCCCcCccc
Q 013142 206 GFKFNIKGVAIGNPLLRLDQ 225 (449)
Q Consensus 206 ~~~inLkGi~iGng~id~~~ 225 (449)
+-.||.|+...+..|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 344999999888777654
No 124
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=82.77 E-value=2.5 Score=39.71 Aligned_cols=67 Identities=10% Similarity=0.142 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
..+..+.+||+...+.. ..++++|.+||+|+.-+-..-..+...... ....-+|..|++.+|-+|..
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHH
Confidence 34455555555544332 356899999999996665555555544321 01123788999988887764
No 125
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=81.41 E-value=3.5 Score=42.56 Aligned_cols=36 Identities=11% Similarity=0.179 Sum_probs=26.8
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHH
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIP 191 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP 191 (449)
++..+++.+.+.+.++..+ .++++|.|||+||-.+=
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVK 177 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHH
Confidence 3456777778887777654 57899999999994433
No 126
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=81.20 E-value=3.7 Score=42.37 Aligned_cols=30 Identities=23% Similarity=0.200 Sum_probs=21.1
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccH
Q 013142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYI 190 (449)
Q Consensus 160 ~~fL~~F~~~fp~~~~~~~yi~GESYgG~yv 190 (449)
.+++++....|-.= ...+-|+|||-|+.-+
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si 194 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASI 194 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHH
Confidence 35677777777432 3469999999999443
No 127
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=80.26 E-value=3.9 Score=41.26 Aligned_cols=68 Identities=22% Similarity=0.298 Sum_probs=41.5
Q ss_pred CcceEEEE-------cCCCccccccCCCC-CCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHH
Q 013142 125 ASNLLFVE-------SPAGVGWSYSNTTS-DYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADV 196 (449)
Q Consensus 125 ~anlLfID-------qPvGtGfSy~~~~~-~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~ 196 (449)
.|-|+|++ +|.|.- ||.+... .| -+.+|+-.|+.++|+.+ ++...=+..|++.+|-|||| .||..
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy-LtseQALADfA~ll~~l-K~~~~a~~~pvIafGGSYGG----MLaAW 183 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGY-LTSEQALADFAELLTFL-KRDLSAEASPVIAFGGSYGG----MLAAW 183 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhcc-ccHHHHHHHHHHHHHHH-hhccccccCcEEEecCchhh----HHHHH
Confidence 35677776 577765 5533221 22 24556656766666544 44333346799999999999 66666
Q ss_pred HHH
Q 013142 197 LLD 199 (449)
Q Consensus 197 i~~ 199 (449)
+--
T Consensus 184 fRl 186 (492)
T KOG2183|consen 184 FRL 186 (492)
T ss_pred HHh
Confidence 543
No 128
>PLN02753 triacylglycerol lipase
Probab=79.99 E-value=5.5 Score=41.61 Aligned_cols=72 Identities=15% Similarity=0.124 Sum_probs=49.1
Q ss_pred chhhHHHHHHHHHHHHHHCCC--CCCCCeEEEecccccccHHHHHHHHHHhc--cCCCCceeeeeeeEecCCCcCc
Q 013142 152 DASTARDMHVFMMNWYEKFPE--FKSRELFLTGESYAGHYIPQLADVLLDHN--AHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 152 ~~~~A~d~~~fL~~F~~~fp~--~~~~~~yi~GESYgG~yvP~la~~i~~~n--~~~~~~~inLkGi~iGng~id~ 223 (449)
...+.+++.+.++...+++|. .....++|+|||.||-.+-..|..|.... .......+++.-+..|.|-+..
T Consensus 286 k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 286 KFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred hhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 345778899999999988864 22457999999999977777777776531 1111123556677777776653
No 129
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=79.77 E-value=35 Score=33.06 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=31.7
Q ss_pred EEEEEEcCCcccccccChHHHHHHHHHHhcCCCC
Q 013142 406 LTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 439 (449)
Q Consensus 406 Ltf~~V~~AGHmvP~dqP~~a~~mi~~fl~~~~~ 439 (449)
-|++.|.++|-++..+||....+-++-|++|..+
T Consensus 275 ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy 308 (326)
T KOG2931|consen 275 TTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGY 308 (326)
T ss_pred ceEEEEcccCCcccccCchHHHHHHHHHHccCCc
Confidence 7889999999999999999999999999999765
No 130
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=79.61 E-value=4.5 Score=40.90 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHHHHHHCCCCCC-CCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 154 STARDMHVFMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~fp~~~~-~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
-.|.|...+|..-.+.||.+.. .|+.+.|.|||| |+..|+.+|. +-.+.||+=-+++.-|.
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccch
Confidence 3588999999988889999985 799999999999 4444444332 44567776666666654
No 131
>PLN02719 triacylglycerol lipase
Probab=78.27 E-value=6.7 Score=40.89 Aligned_cols=71 Identities=15% Similarity=0.169 Sum_probs=48.5
Q ss_pred hhhHHHHHHHHHHHHHHCCCCC--CCCeEEEecccccccHHHHHHHHHHhccC--CCCceeeeeeeEecCCCcCc
Q 013142 153 ASTARDMHVFMMNWYEKFPEFK--SRELFLTGESYAGHYIPQLADVLLDHNAH--SKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~--~~~~yi~GESYgG~yvP~la~~i~~~n~~--~~~~~inLkGi~iGng~id~ 223 (449)
..+.+++.+.|++..+++|... ...++|+|||.||-.+-..|..|.+..-. .....+++.-+..|.|-+..
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 3466788899999999998642 34699999999997777777777653111 11113456667777776643
No 132
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=77.24 E-value=3.8 Score=37.89 Aligned_cols=46 Identities=24% Similarity=0.399 Sum_probs=31.3
Q ss_pred HHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 164 MNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 164 ~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
.+|++.+|+-..+++-|.|-|.|| .+|..+..... .++.++..+|.
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGa----elALllAs~~~-------~i~avVa~~ps 55 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGA----ELALLLASRFP-------QISAVVAISPS 55 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHH----HHHHHHHHHSS-------SEEEEEEES--
T ss_pred HHHHHhCCCCCCCCEEEEEECHHH----HHHHHHHhcCC-------CccEEEEeCCc
Confidence 457788999888899999999999 55554444432 47788876664
No 133
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=75.96 E-value=4.7 Score=36.46 Aligned_cols=60 Identities=17% Similarity=0.316 Sum_probs=48.8
Q ss_pred CchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCC
Q 013142 151 GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (449)
Q Consensus 151 ~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng 219 (449)
+-+++|.|+-+.++.+.++. +.+.+.|.|-|+|.--+|.+..++-..- +-.++++++-.+
T Consensus 46 tP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~------r~~v~~v~Ll~p 105 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAAL------RARVAQVVLLSP 105 (192)
T ss_pred CHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHH------HhheeEEEEecc
Confidence 66789999999999888754 5778999999999999999998887654 334788888444
No 134
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=75.94 E-value=0.76 Score=45.62 Aligned_cols=104 Identities=16% Similarity=0.251 Sum_probs=58.1
Q ss_pred CCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCcc-CCcceEEEEcCCCccccccCCCCCCccCchhhH
Q 013142 78 HEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGVGWSYSNTTSDYNCGDASTA 156 (449)
Q Consensus 78 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~-~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A 156 (449)
.++|++|.++|=-+..+.. .-+.+ +..+-.... ...|||.||=-.+..-.|.. ...+...++
T Consensus 69 ~~~pt~iiiHGw~~~~~~~-~~~~~------------~~~all~~~~~d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg 131 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSE-SWIQD------------MIKALLQKDTGDYNVIVVDWSRGASNNYPQ----AVANTRLVG 131 (331)
T ss_dssp TTSEEEEEE--TT-TT-TT-THHHH------------HHHHHHCC--S-EEEEEEE-HHHHSS-HHH----HHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccch-hHHHH------------HHHHHHhhccCCceEEEEcchhhccccccc----hhhhHHHHH
Confidence 5789999999765544110 11110 111222221 46899999964333222211 023455677
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHH
Q 013142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (449)
Q Consensus 157 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (449)
+.+..||+...... .+...+++|.|+|.|+|.+-..++++..
T Consensus 132 ~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 132 RQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 77778888777443 2334689999999999999888888766
No 135
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=74.36 E-value=11 Score=35.12 Aligned_cols=86 Identities=16% Similarity=0.107 Sum_probs=53.0
Q ss_pred ceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCC
Q 013142 127 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKG 206 (449)
Q Consensus 127 nlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 206 (449)
+...|+-|.+.+-=.+-+...+..+..+.++.+.+.|+.+.. ..+++.|+|.|-|+.-+-....++.+....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~--- 75 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP--- 75 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC---
Confidence 445566665433211111112333555667777788887654 478999999999996666666666553221
Q ss_pred ceeeeeeeEecCCC
Q 013142 207 FKFNIKGVAIGNPL 220 (449)
Q Consensus 207 ~~inLkGi~iGng~ 220 (449)
..-+++-+.+||+-
T Consensus 76 ~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 76 PPDDLSFVLIGNPR 89 (225)
T ss_pred CcCceEEEEecCCC
Confidence 12468899999984
No 136
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=73.92 E-value=2.1 Score=39.08 Aligned_cols=71 Identities=14% Similarity=0.061 Sum_probs=46.4
Q ss_pred CccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeE
Q 013142 136 GVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVA 215 (449)
Q Consensus 136 GtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~ 215 (449)
-|||-+++.. .+-+++..++.++++--++.+|.- +.+.+.|||-|.|- |.+++.+.. .-.+.|++
T Consensus 102 svgY~l~~q~----htL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHL----a~qav~R~r-----~prI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQV----HTLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHL----AAQAVMRQR-----SPRIWGLI 166 (270)
T ss_pred EeccCcCccc----ccHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHH----HHHHHHHhc-----CchHHHHH
Confidence 4566554432 366788888888888777778743 34999999999954 444444321 23367777
Q ss_pred ecCCCc
Q 013142 216 IGNPLL 221 (449)
Q Consensus 216 iGng~i 221 (449)
+-.|+-
T Consensus 167 l~~GvY 172 (270)
T KOG4627|consen 167 LLCGVY 172 (270)
T ss_pred HHhhHh
Confidence 777754
No 137
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=73.69 E-value=58 Score=30.27 Aligned_cols=82 Identities=17% Similarity=0.087 Sum_probs=49.2
Q ss_pred eEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCc
Q 013142 128 LLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGF 207 (449)
Q Consensus 128 lLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~ 207 (449)
.+-+|=- |-|-|.++= +| -+-...|+|+...+|-|-. ....==.|.|||=||--+-..|.++.+- ..
T Consensus 65 ~fRfDF~-GnGeS~gsf--~~-Gn~~~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~-----~~ 131 (269)
T KOG4667|consen 65 AFRFDFS-GNGESEGSF--YY-GNYNTEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHDI-----RN 131 (269)
T ss_pred EEEEEec-CCCCcCCcc--cc-CcccchHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcCc-----hh
Confidence 3445633 778775431 11 1222456899888886653 1111236789999998887778777651 12
Q ss_pred eeeeeeeEecCCCcC
Q 013142 208 KFNIKGVAIGNPLLR 222 (449)
Q Consensus 208 ~inLkGi~iGng~id 222 (449)
-||+.|=..+-+.|.
T Consensus 132 viNcsGRydl~~~I~ 146 (269)
T KOG4667|consen 132 VINCSGRYDLKNGIN 146 (269)
T ss_pred eEEcccccchhcchh
Confidence 577777666555554
No 138
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=73.34 E-value=9.1 Score=35.70 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHHHHHHC--CCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeee-EecCCCcCcc
Q 013142 154 STARDMHVFMMNWYEKF--PEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGV-AIGNPLLRLD 224 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~f--p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi-~iGng~id~~ 224 (449)
..++.+.+.++...+.+ ..-..+++.|.|||+|| -+|+.++...... .-++++| .+|.|...+.
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGG----lvar~~l~~~~~~---~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGG----LVARSALSLPNYD---PDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhh----HHHHHHHhccccc---cccEEEEEEEcCCCCCcc
Confidence 45556666666666655 12236789999999999 6666665543211 2235554 4566766554
No 139
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=72.71 E-value=7.1 Score=35.35 Aligned_cols=55 Identities=22% Similarity=0.314 Sum_probs=40.5
Q ss_pred CccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhc
Q 013142 136 GVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 201 (449)
Q Consensus 136 GtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n 201 (449)
|||-|.++-+.+ ..+.+.|....+++| +++|.-. .+.++|-|+|+ ++|..+..+.
T Consensus 70 gVG~S~G~fD~G--iGE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa----~Ia~~la~r~ 124 (210)
T COG2945 70 GVGRSQGEFDNG--IGELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGA----YIAMQLAMRR 124 (210)
T ss_pred ccccccCcccCC--cchHHHHHHHHHHHH---hhCCCch--hhhhcccchHH----HHHHHHHHhc
Confidence 999998765443 366667777777777 5788643 37999999999 7777777664
No 140
>PLN02324 triacylglycerol lipase
Probab=71.52 E-value=14 Score=37.70 Aligned_cols=70 Identities=16% Similarity=0.107 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccC-----CCCceeeeeeeEecCCCcCc
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH-----SKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~-----~~~~~inLkGi~iGng~id~ 223 (449)
..+.+++.+-|+.+.+++|... ..++|+|||.||-.+-..|..|...... .....+++.-+..|.|-+..
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 3566778888999999888532 3699999999997777667777653110 00123456666677776543
No 141
>PLN02408 phospholipase A1
Probab=71.23 E-value=11 Score=37.81 Aligned_cols=64 Identities=13% Similarity=0.093 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
...+++.+-|+++.+++|.. ...++|+|||.||-.+-..|..|...... ...+.-+..|.|-+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~----~~~V~v~tFGsPRVG 242 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR----APMVTVISFGGPRVG 242 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC----CCceEEEEcCCCCcc
Confidence 45677888899999988864 23599999999997777767666653211 113555666766654
No 142
>PLN02761 lipase class 3 family protein
Probab=71.15 E-value=14 Score=38.74 Aligned_cols=70 Identities=14% Similarity=0.127 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHHHHHCCCC-C--CCCeEEEecccccccHHHHHHHHHHhccC---CCCceeeeeeeEecCCCcCc
Q 013142 154 STARDMHVFMMNWYEKFPEF-K--SRELFLTGESYAGHYIPQLADVLLDHNAH---SKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~fp~~-~--~~~~yi~GESYgG~yvP~la~~i~~~n~~---~~~~~inLkGi~iGng~id~ 223 (449)
.+.+++.+.++...+.+|.. + ...++|+|||.||-.+-..|..|...+-. .....+++.-+..|.|-+..
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 56778889999998888632 1 23599999999997776666666543211 01224556677777776543
No 143
>PRK07868 acyl-CoA synthetase; Validated
Probab=70.45 E-value=7.6 Score=44.67 Aligned_cols=61 Identities=18% Similarity=0.192 Sum_probs=46.4
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEE-EEEcCCcccccc---cCh
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTF-VTVRGAAHMVPY---AQP 423 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf-~~V~~AGHmvP~---dqP 423 (449)
..++|++.|..|.++|....+.+.+.+ .+ ..+ ..+.++|||.+. .-|
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i----------------------------~~-a~~~~~~~~~GH~g~~~g~~a~ 347 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAA----------------------------PN-AEVYESLIRAGHFGLVVGSRAA 347 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEEeCCCCCEeeeechhhh
Confidence 689999999999999998888776651 13 444 456789999654 456
Q ss_pred HHHHHHHHHHhcCC
Q 013142 424 SRALHLFSSFVHGR 437 (449)
Q Consensus 424 ~~a~~mi~~fl~~~ 437 (449)
+.....+.+||...
T Consensus 348 ~~~wp~i~~wl~~~ 361 (994)
T PRK07868 348 QQTWPTVADWVKWL 361 (994)
T ss_pred hhhChHHHHHHHHh
Confidence 67777888899854
No 144
>PLN02802 triacylglycerol lipase
Probab=69.91 E-value=11 Score=39.26 Aligned_cols=65 Identities=17% Similarity=0.118 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
.+.+++.+-++.+++++|.-. ..++|+|||.||-.+-..|..|...... .+.+.-+..|.|-+..
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVGN 373 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCccc
Confidence 456778888888888887432 3699999999997777777666554221 2345567777776543
No 145
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=69.81 E-value=9.9 Score=35.48 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCC
Q 013142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (449)
Q Consensus 157 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng 219 (449)
+...++++...+.+++ +++|+|||=||..+-+.|..+.+.. .-+++.+..-||
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~------~~rI~~vy~fDg 121 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEI------QDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHH------hhheeEEEEeeC
Confidence 3445677777777763 5999999999977666666644332 123555555444
No 146
>COG0627 Predicted esterase [General function prediction only]
Probab=69.17 E-value=20 Score=35.40 Aligned_cols=130 Identities=18% Similarity=0.218 Sum_probs=66.4
Q ss_pred CCCeeEEecCCCChhhhhhhhhhccCCceecCCCCc--ee-eccCCccCCcceEEEEcCCCccccccCCCCCCccCchhh
Q 013142 79 EKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRG--LR-RNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDAST 155 (449)
Q Consensus 79 ~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~--~~-~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~ 155 (449)
++--|+|+.+|..|.-- .+.+.++++-..+... +. ++-.-+....++--|+ |+|.|.|+-.+-..-.....
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~-- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG-- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC--
Confidence 44445555667888831 2233444432222111 11 1234466666677777 68999997432211000000
Q ss_pred HHHHHHHHH-----HHHHHCCCCCC-CCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 156 ARDMHVFMM-----NWYEKFPEFKS-RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 156 A~d~~~fL~-----~F~~~fp~~~~-~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
..+.+.||. .+.+.||.-.+ ..-.|+|+|+||+=+=.+| ..+. -.++.++=-.|+++|.
T Consensus 126 ~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA----~~~p------d~f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLA----LKHP------DRFKSASSFSGILSPS 190 (316)
T ss_pred ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhh----hhCc------chhceecccccccccc
Confidence 244555553 45556764332 2588999999995544444 3331 1255666666666665
No 147
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=68.81 E-value=34 Score=32.66 Aligned_cols=54 Identities=15% Similarity=0.157 Sum_probs=30.7
Q ss_pred HHHHHHHHH----HHHHH-CCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 156 ARDMHVFMM----NWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 156 A~d~~~fL~----~F~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
|+.+.+||. =|.+. ++ ....+--|+|||||| -++...+-.. +--+.-+++.+|-
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGG----Lfvl~aLL~~------p~~F~~y~~~SPS 171 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYR-TNSERTAIIGHSLGG----LFVLFALLTY------PDCFGRYGLISPS 171 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccc-cCcccceeeeecchh----HHHHHHHhcC------cchhceeeeecch
Confidence 344555554 45554 43 334458999999999 6666544433 1125555665553
No 148
>PRK04940 hypothetical protein; Provisional
Probab=67.14 E-value=14 Score=33.29 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=27.0
Q ss_pred CCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcccc
Q 013142 176 RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQD 226 (449)
Q Consensus 176 ~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~~ 226 (449)
.++.|+|-|-||.|+-.||.+ ..++.| +.||.+.|...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~------------~g~~aV-LiNPAv~P~~~ 97 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFL------------CGIRQV-IFNPNLFPEEN 97 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHH------------HCCCEE-EECCCCChHHH
Confidence 479999999999666666643 225555 45999988643
No 149
>PLN00413 triacylglycerol lipase
Probab=67.09 E-value=7.2 Score=40.32 Aligned_cols=39 Identities=18% Similarity=0.362 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHH
Q 013142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (449)
Q Consensus 158 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (449)
++.+.|++.++++|. .+++|+|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 566778888888884 469999999999777666665543
No 150
>PRK14567 triosephosphate isomerase; Provisional
Probab=65.38 E-value=12 Score=35.57 Aligned_cols=61 Identities=20% Similarity=0.333 Sum_probs=44.5
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
.+.++++..++++++.++-+-....+=|. |||---|.=+..|++.. ++.|+.||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 36788899999999876521111222222 99988999999998753 388999999998775
No 151
>PLN02310 triacylglycerol lipase
Probab=64.55 E-value=16 Score=37.11 Aligned_cols=64 Identities=14% Similarity=0.082 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHHHHHHCCCC-CCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 154 STARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~fp~~-~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
.+.+++.+.+++..+.+++- ....+.|+|||.||-.+-..|..|.... +.+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 35567777788877777532 2346999999999966655555554322 1345666777777664
No 152
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=63.98 E-value=16 Score=34.29 Aligned_cols=64 Identities=19% Similarity=0.281 Sum_probs=38.6
Q ss_pred cceEEEEcCCCccccccCCCCCCccCch-hhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHH
Q 013142 126 SNLLFVESPAGVGWSYSNTTSDYNCGDA-STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQL 193 (449)
Q Consensus 126 anlLfIDqPvGtGfSy~~~~~~~~~~~~-~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~l 193 (449)
..||-.|-- |.|-|.....+...+.-. -+-.|+-..|..--+.-| ..|.|..||||||+-.-.+
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred ceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccc
Confidence 467777866 999888665443222211 233445455544334444 6799999999999654333
No 153
>PLN02847 triacylglycerol lipase
Probab=63.97 E-value=14 Score=39.40 Aligned_cols=53 Identities=15% Similarity=0.253 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecC
Q 013142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGN 218 (449)
Q Consensus 158 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGn 218 (449)
.+...|++-+..+|.| ++.|+|||.||--+..++..+. .+.. ..+++.+..|-
T Consensus 236 ~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLR-e~~~----fssi~CyAFgP 288 (633)
T PLN02847 236 LSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILR-EQKE----FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHh-cCCC----CCCceEEEecC
Confidence 3334555556678865 5999999999977766655443 3221 23455666664
No 154
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=63.61 E-value=16 Score=36.40 Aligned_cols=60 Identities=18% Similarity=0.278 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 157 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
.++.+-++.....+| +..++++|||-||-.+...|..|...... ...+++=+.-|-|-+.
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCcc
Confidence 345556666667777 55799999999999999999998876532 1355666667777554
No 155
>PRK14566 triosephosphate isomerase; Provisional
Probab=62.60 E-value=14 Score=35.23 Aligned_cols=61 Identities=21% Similarity=0.401 Sum_probs=44.9
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
.+.|+++..||++++.+.-.-....+=|. |||---|.-+..|.+.. ++.|+.||..-+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 36788999999999875421111222222 99999999999998764 388999999988874
No 156
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=62.20 E-value=16 Score=32.54 Aligned_cols=44 Identities=23% Similarity=0.431 Sum_probs=33.8
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCccccccc
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA 421 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~d 421 (449)
.++.+++..+.|..||+.-++++.+++ + ..++.+.++||+...+
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l-----------------------------~-a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRL-----------------------------G-AELIILGGGGHFNAAS 157 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHH-----------------------------T--EEEEETS-TTSSGGG
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHc-----------------------------C-CCeEECCCCCCccccc
Confidence 355589999999999999998888883 3 7779999999998753
No 157
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=61.72 E-value=77 Score=30.22 Aligned_cols=59 Identities=15% Similarity=0.084 Sum_probs=39.7
Q ss_pred CchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 151 GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 151 ~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
+.++.|+...+.|+ +.-|+ -|.+|.|-|+||.-+=.+|.++..+-+ .+.-++|.|....
T Consensus 46 ~l~~~a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~-------~Va~L~llD~~~~ 104 (257)
T COG3319 46 SLDDMAAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGE-------EVAFLGLLDAVPP 104 (257)
T ss_pred CHHHHHHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCC-------eEEEEEEeccCCC
Confidence 56677777777776 56664 399999999999666666666655432 2556667555443
No 158
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=61.66 E-value=1.6e+02 Score=31.45 Aligned_cols=26 Identities=12% Similarity=0.096 Sum_probs=23.8
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRE 373 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~ 373 (449)
..+++++.|..|.|+|+..+....+.
T Consensus 441 ~~Pvl~va~~~DHIvPw~s~~~~~~l 466 (560)
T TIGR01839 441 KCDSFSVAGTNDHITPWDAVYRSALL 466 (560)
T ss_pred CCCeEEEecCcCCcCCHHHHHHHHHH
Confidence 68999999999999999999888776
No 159
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=61.42 E-value=23 Score=34.93 Aligned_cols=121 Identities=22% Similarity=0.304 Sum_probs=66.2
Q ss_pred CeeEEEEEEEecCCCCCCCeeEEecCCCChhhhh-----hhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCc
Q 013142 63 GRSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVG-----GGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGV 137 (449)
Q Consensus 63 ~~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~-----~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGt 137 (449)
+--.+.|.- . ......|+++-++|==|.|.-. ...+.+-| ..++-.+-- |.
T Consensus 60 ~~~~ldw~~-~-p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg---------------------~~~Vv~~~R-gc 115 (345)
T COG0429 60 GFIDLDWSE-D-PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG---------------------WLVVVFHFR-GC 115 (345)
T ss_pred CEEEEeecc-C-ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC---------------------CeEEEEecc-cc
Confidence 345566632 1 1224569999999987776542 22333333 223334422 55
Q ss_pred cccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEec
Q 013142 138 GWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIG 217 (449)
Q Consensus 138 GfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iG 217 (449)
|.+-.....-|...+. +|+..||....+++| .+++|.+|-|.||. .||.++.++-+. .....++++-
T Consensus 116 s~~~n~~p~~yh~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d----~~~~aa~~vs 182 (345)
T COG0429 116 SGEANTSPRLYHSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDD----LPLDAAVAVS 182 (345)
T ss_pred cCCcccCcceecccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccC----cccceeeeee
Confidence 5443322222222222 445555554445676 68999999999993 566777665432 2236677776
Q ss_pred CCC
Q 013142 218 NPL 220 (449)
Q Consensus 218 ng~ 220 (449)
+|+
T Consensus 183 ~P~ 185 (345)
T COG0429 183 APF 185 (345)
T ss_pred CHH
Confidence 664
No 160
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=61.33 E-value=9.1 Score=34.31 Aligned_cols=83 Identities=20% Similarity=0.259 Sum_probs=50.0
Q ss_pred ceEEEEcCCCccc-cccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCC
Q 013142 127 NLLFVESPAGVGW-SYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSK 205 (449)
Q Consensus 127 nlLfIDqPvGtGf-Sy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (449)
++--|+-|+..+. +|. .+..+.++++...|+++..+-| +.++.|+|-|=|+ .++...+.+.....
T Consensus 41 ~~~~V~YpA~~~~~~y~-------~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA----~V~~~~~~~~~l~~ 106 (179)
T PF01083_consen 41 AVQGVEYPASLGPNSYG-------DSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGA----MVVGDALSGDGLPP 106 (179)
T ss_dssp EEEE--S---SCGGSCH-------HHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHH----HHHHHHHHHTTSSH
T ss_pred EEEecCCCCCCCccccc-------ccHHHHHHHHHHHHHHHHHhCC---CCCEEEEeccccc----HHHHHHHHhccCCh
Confidence 3334667776665 332 2555677888999999999999 4689999999999 55555554411111
Q ss_pred Cceeeeee-eEecCCCcCc
Q 013142 206 GFKFNIKG-VAIGNPLLRL 223 (449)
Q Consensus 206 ~~~inLkG-i~iGng~id~ 223 (449)
...-++.+ +.+|||...+
T Consensus 107 ~~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 107 DVADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHHEEEEEEES-TTTBT
T ss_pred hhhhhEEEEEEecCCcccC
Confidence 11334666 5778887654
No 161
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=60.18 E-value=7 Score=39.59 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=23.6
Q ss_pred CeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCccc
Q 013142 177 ELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 225 (449)
Q Consensus 177 ~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~ 225 (449)
.+.++|||||| +.|.+.+.+. ..++..++-|||+-|..
T Consensus 229 ~i~~~GHSFGG----ATa~~~l~~d-------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGG----ATALQALRQD-------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHH----HHHHHHHHH--------TT--EEEEES---TTS-
T ss_pred heeeeecCchH----HHHHHHHhhc-------cCcceEEEeCCcccCCC
Confidence 59999999999 5555555442 33788889999998753
No 162
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=59.74 E-value=42 Score=32.46 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=61.6
Q ss_pred CCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcc--eEEEEcCCCccccccCCCCCCccCchh
Q 013142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASN--LLFVESPAGVGWSYSNTTSDYNCGDAS 154 (449)
Q Consensus 77 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~an--lLfIDqPvGtGfSy~~~~~~~~~~~~~ 154 (449)
.++..+|+=++|-||+-= + |-=+= ++...++ +|=|--| |-|++....... -
T Consensus 32 gs~~gTVv~~hGsPGSH~-D---FkYi~----------------~~l~~~~iR~I~iN~P-Gf~~t~~~~~~~------~ 84 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHN-D---FKYIR----------------PPLDEAGIRFIGINYP-GFGFTPGYPDQQ------Y 84 (297)
T ss_pred CCCceeEEEecCCCCCcc-c---hhhhh----------------hHHHHcCeEEEEeCCC-CCCCCCCCcccc------c
Confidence 345668999999999542 1 10000 1222222 3445568 888876443222 2
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 155 ~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
+..+-..|...++++- +++ ..+.+.|||-|+ .-|.++...+ ++.|+++.||.
T Consensus 85 ~n~er~~~~~~ll~~l-~i~-~~~i~~gHSrGc----enal~la~~~--------~~~g~~lin~~ 136 (297)
T PF06342_consen 85 TNEERQNFVNALLDEL-GIK-GKLIFLGHSRGC----ENALQLAVTH--------PLHGLVLINPP 136 (297)
T ss_pred ChHHHHHHHHHHHHHc-CCC-CceEEEEeccch----HHHHHHHhcC--------ccceEEEecCC
Confidence 2333446777777765 454 468888999999 5555554433 36799998874
No 163
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=59.66 E-value=6.6 Score=36.15 Aligned_cols=49 Identities=27% Similarity=0.312 Sum_probs=30.7
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 425 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~ 425 (449)
.+++|.+.|..|.+++...++...+... +. ..+.....||.||...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~----------------------------~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD----------------------------PD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH----------------------------HH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc----------------------------CC-cEEEEECCCCcCcCChhhc
Confidence 6999999999999999888877777632 21 3366778999999876643
No 164
>PLN02934 triacylglycerol lipase
Probab=59.31 E-value=15 Score=38.44 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHH
Q 013142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 199 (449)
Q Consensus 157 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (449)
.++...|+++++++|. .+++++|||.||-.+-..|..+..
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHH
Confidence 3466778888888885 469999999999666655555543
No 165
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=58.70 E-value=1.6e+02 Score=29.73 Aligned_cols=91 Identities=18% Similarity=0.215 Sum_probs=61.4
Q ss_pred hhhccCcHHHHHHhcCCCCCCCCccccccccccccCCCCCCChHHHHHHHHhcCCcEEEEecCCCccCCchhHHHHHHHH
Q 013142 295 RFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIREL 374 (449)
Q Consensus 295 ~~~ylN~~~Vk~aL~v~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l 374 (449)
+..+++.|..++.+.+- +-..+.+.| .++-+|++|--|--.....+..+.++|
T Consensus 236 i~~~l~tp~f~~L~~iv------------------------DP~~Y~~rL---~~PK~ii~atgDeFf~pD~~~~y~d~L 288 (367)
T PF10142_consen 236 ITQQLDTPEFDKLMQIV------------------------DPYSYRDRL---TMPKYIINATGDEFFVPDSSNFYYDKL 288 (367)
T ss_pred chhhcCCHHHHHHHHhc------------------------CHHHHHHhc---CccEEEEecCCCceeccCchHHHHhhC
Confidence 45677888888777542 122334455 689999999888777777888888875
Q ss_pred HHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccc-cChHHHHHHHHHHhcCCCCC
Q 013142 375 ARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY-AQPSRALHLFSSFVHGRRLP 440 (449)
Q Consensus 375 ~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~-dqP~~a~~mi~~fl~~~~~~ 440 (449)
+++ =.+..|+|+||..-. +--+.....+.+.+.+.++|
T Consensus 289 ~G~----------------------------K~lr~vPN~~H~~~~~~~~~~l~~f~~~~~~~~~lP 327 (367)
T PF10142_consen 289 PGE----------------------------KYLRYVPNAGHSLIGSDVVQSLRAFYNRIQNGRPLP 327 (367)
T ss_pred CCC----------------------------eeEEeCCCCCcccchHHHHHHHHHHHHHHHcCCCCC
Confidence 432 233568899998754 22333445677777888888
No 166
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=58.54 E-value=16 Score=33.78 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=34.0
Q ss_pred chhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHh
Q 013142 152 DASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (449)
Q Consensus 152 ~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (449)
.+..++.+.+.|.+..+..+.- .+++.+.|+|.||-++=+....+.+.
T Consensus 55 I~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 55 IDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred hHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 3456777888888777666543 46899999999997775555555444
No 167
>PLN02162 triacylglycerol lipase
Probab=57.92 E-value=15 Score=37.92 Aligned_cols=38 Identities=16% Similarity=0.271 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHH
Q 013142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 198 (449)
Q Consensus 158 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~ 198 (449)
.+.+.|+.++.++|. .+++++|||.||-.+-..|..+.
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~ 300 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILA 300 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHH
Confidence 455667777778874 46999999999965555444443
No 168
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=57.84 E-value=25 Score=32.61 Aligned_cols=46 Identities=24% Similarity=0.377 Sum_probs=36.0
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccCh
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 423 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP 423 (449)
..+.|-+-|+.|.+++..-++..++. +.+ - .+...-+||+||.-.|
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~----------------------------~~~-a-~vl~HpggH~VP~~~~ 208 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAES----------------------------FKD-A-TVLEHPGGHIVPNKAK 208 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHh----------------------------cCC-C-eEEecCCCccCCCchH
Confidence 58899999999999999888877777 233 2 3556679999997553
No 169
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=56.94 E-value=30 Score=35.90 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=47.7
Q ss_pred CchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcccchh
Q 013142 151 GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVP 228 (449)
Q Consensus 151 ~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~~~~ 228 (449)
+.+++-.|+.+|++..-.+|+.-.+.|++.+|-||.| .|+..+-+.-. .+ +.|-+--.+-+....++.
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsG----sLsAW~R~~yP-----el-~~GsvASSapv~A~~DF~ 214 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSG----SLSAWFREKYP-----EL-TVGSVASSAPVLAKVDFY 214 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchh----HHHHHHHHhCc-----hh-heeecccccceeEEecHH
Confidence 5667788999999998889976555699999999999 88888876542 22 334333444455544443
No 170
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=56.90 E-value=19 Score=36.53 Aligned_cols=40 Identities=15% Similarity=0.190 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhc
Q 013142 158 DMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHN 201 (449)
Q Consensus 158 d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n 201 (449)
+.+.-|++..+.-=+.+++++.|.|||+|| .++.+.++..
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGg----l~~~~fl~~~ 140 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGG----LVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCc----hHHHHHHHhc
Confidence 344445554443212337899999999999 5555554443
No 171
>PLN03037 lipase class 3 family protein; Provisional
Probab=56.28 E-value=28 Score=36.54 Aligned_cols=64 Identities=17% Similarity=0.126 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHCCCC-CCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcC
Q 013142 155 TARDMHVFMMNWYEKFPEF-KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 222 (449)
Q Consensus 155 ~A~d~~~fL~~F~~~fp~~-~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id 222 (449)
+.+++.+-+++..+.+++. ....++|+|||.||--+-..|..|...... ..++.-+..|.|-+.
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~----~~~VtvyTFGsPRVG 360 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA----LSNISVISFGAPRVG 360 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC----CCCeeEEEecCCCcc
Confidence 3456777788888777643 234699999999997666556555543221 113445556666543
No 172
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=55.99 E-value=19 Score=32.23 Aligned_cols=63 Identities=14% Similarity=0.115 Sum_probs=37.5
Q ss_pred CCcceEEEEcCCC--ccccccCCCCCCccCchhhHHHHHHHHHHHHHHC-CCCCCCCeEEEecccccccHHHHH
Q 013142 124 KASNLLFVESPAG--VGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKF-PEFKSRELFLTGESYAGHYIPQLA 194 (449)
Q Consensus 124 ~~anlLfIDqPvG--tGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~f-p~~~~~~~yi~GESYgG~yvP~la 194 (449)
+.|-|.|++-... ...+-. . .. --+..|.+|..|+..+-..+ | ...+-+.|||||..-+-.-+
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~-~-~~---~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~ 127 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAA-S-PG---YARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAA 127 (177)
T ss_pred CeEEEEEcCCCCCCCcccccc-C-ch---HHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHh
Confidence 6788888855444 222211 1 10 11345777777777766555 3 34699999999995444333
No 173
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=55.28 E-value=46 Score=25.31 Aligned_cols=78 Identities=19% Similarity=0.246 Sum_probs=46.1
Q ss_pred eeEEEEEEEecCCCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccC
Q 013142 64 RSLFYYFVEAEVEPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSN 143 (449)
Q Consensus 64 ~~lFy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~ 143 (449)
.+||+..++..+. .+.+|+.++|--..|. -+.|.....- . +-.+|+-.|+. |.|.|.+.
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~----ry~~~a~~L~--------~------~G~~V~~~D~r-GhG~S~g~ 60 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSG----RYAHLAEFLA--------E------QGYAVFAYDHR-GHGRSEGK 60 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHH----HHHHHHHHHH--------h------CCCEEEEECCC-cCCCCCCc
Confidence 3577766654322 6899999998733333 3333322111 1 23568889988 99999743
Q ss_pred CCCCCccCchhhHHHHHHHHH
Q 013142 144 TTSDYNCGDASTARDMHVFMM 164 (449)
Q Consensus 144 ~~~~~~~~~~~~A~d~~~fL~ 164 (449)
. ....+-++..+|+..|++
T Consensus 61 r--g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 R--GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred c--cccCCHHHHHHHHHHHhC
Confidence 2 223355566777766653
No 174
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=53.43 E-value=27 Score=32.79 Aligned_cols=61 Identities=28% Similarity=0.495 Sum_probs=45.3
Q ss_pred CcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChH---H
Q 013142 349 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS---R 425 (449)
Q Consensus 349 irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~---~ 425 (449)
.++|+.+|..|.++|....+........ .. .....+.+++|....+.+. .
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~--------------------------~~-~~~~~~~~~~H~~~~~~~~~~~~ 285 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARE--------------------------RP-KKLLFVPGGGHIDLYDNPPAVEQ 285 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhcc--------------------------CC-ceEEEecCCccccccCccHHHHH
Confidence 8999999999999998887766665110 03 6678888999999986655 5
Q ss_pred HHHHHHHHhcC
Q 013142 426 ALHLFSSFVHG 436 (449)
Q Consensus 426 a~~mi~~fl~~ 436 (449)
++.-+.+|+..
T Consensus 286 ~~~~~~~f~~~ 296 (299)
T COG1073 286 ALDKLAEFLER 296 (299)
T ss_pred HHHHHHHHHHH
Confidence 66666666643
No 175
>COG0218 Predicted GTPase [General function prediction only]
Probab=53.42 E-value=31 Score=31.51 Aligned_cols=62 Identities=24% Similarity=0.294 Sum_probs=39.7
Q ss_pred CCCCCeeEEecCC--CChhhhhhhhhhc-cCCcee-cCCCCceeeccCCccCCcceEEEEcCCCcccccc
Q 013142 77 PHEKPLTLWLNGG--PGCSSVGGGAFTE-LGPFYP-RGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYS 142 (449)
Q Consensus 77 ~~~~PlilWlnGG--PG~SS~~~g~f~E-~GP~~i-~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~ 142 (449)
|+++..=+-|-|. =|=||+ +-.+.. -+=-+. +..|.+-..|-+.|++. +.+||.| |-||..+
T Consensus 20 P~~~~~EIaF~GRSNVGKSSl-IN~l~~~k~LArtSktPGrTq~iNff~~~~~--~~lVDlP-GYGyAkv 85 (200)
T COG0218 20 PEDDLPEIAFAGRSNVGKSSL-INALTNQKNLARTSKTPGRTQLINFFEVDDE--LRLVDLP-GYGYAKV 85 (200)
T ss_pred CCCCCcEEEEEccCcccHHHH-HHHHhCCcceeecCCCCCccceeEEEEecCc--EEEEeCC-CcccccC
Confidence 4444444444443 478888 555543 222233 33566777899999888 8899999 9888754
No 176
>PLN02429 triosephosphate isomerase
Probab=52.40 E-value=25 Score=34.47 Aligned_cols=60 Identities=22% Similarity=0.354 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 154 STARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
+.++.+.+++++++.. +.+-....+-|. |||---|.-+.+|..+. ++.|+.||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~--------diDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEE--------DIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCC--------CCCEEEeecceecHH
Confidence 6788889999998864 432212222222 89988889998887653 488999999998764
No 177
>PHA00007 E cell lysis protein
Probab=51.15 E-value=20 Score=27.11 Aligned_cols=19 Identities=32% Similarity=0.600 Sum_probs=15.6
Q ss_pred CCccchhHHHHHHHHHHHH
Q 013142 1 MGRWCFGGFLNISLVVLLL 19 (449)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~ 19 (449)
|.||..-+.|..+++++++
T Consensus 1 Me~WTL~~~LAFLLLLSLl 19 (91)
T PHA00007 1 MEHWTLSDTLAFLLLLSLL 19 (91)
T ss_pred CceeeHHHHHHHHHHHHHH
Confidence 8899999999887777653
No 178
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=49.28 E-value=17 Score=33.94 Aligned_cols=45 Identities=18% Similarity=0.014 Sum_probs=31.6
Q ss_pred HCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 169 KFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 169 ~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
+|+-...+ ..|+|.|+|| ..|..+.-+.. -.+.+++.-+|.+++.
T Consensus 109 ~~~~~~~~-~~i~G~S~GG----~~Al~~~l~~P------d~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 109 NYRTDPDR-RAIAGHSMGG----YGALYLALRHP------DLFGAVIAFSGALDPS 153 (251)
T ss_dssp HSSEEECC-EEEEEETHHH----HHHHHHHHHST------TTESEEEEESEESETT
T ss_pred hcccccce-eEEeccCCCc----HHHHHHHHhCc------cccccccccCcccccc
Confidence 45544344 8999999999 66666555542 2388888888877765
No 179
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=48.14 E-value=30 Score=30.75 Aligned_cols=50 Identities=12% Similarity=0.138 Sum_probs=30.5
Q ss_pred HHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHH-HhccCCCCceeeeeeeEecCCCc
Q 013142 161 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL-DHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 161 ~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~-~~n~~~~~~~inLkGi~iGng~i 221 (449)
++++.+-+..... ..+.+|+|||.|+ .++.+.+ .+. ..+++|+++..|+-
T Consensus 41 ~W~~~l~~~i~~~-~~~~ilVaHSLGc----~~~l~~l~~~~------~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 41 EWVQALDQAIDAI-DEPTILVAHSLGC----LTALRWLAEQS------QKKVAGALLVAPFD 91 (171)
T ss_dssp HHHHHHHHCCHC--TTTEEEEEETHHH----HHHHHHHHHTC------CSSEEEEEEES--S
T ss_pred HHHHHHHHHHhhc-CCCeEEEEeCHHH----HHHHHHHhhcc------cccccEEEEEcCCC
Confidence 3444444444443 4579999999999 4444444 222 45799999999973
No 180
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=48.13 E-value=26 Score=33.77 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=28.9
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccc
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAG 187 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG 187 (449)
.++|+.+++.+..-....|+=..-++|++|||-|.
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa 120 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGA 120 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccc
Confidence 45678888888888888887666679999999987
No 181
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=47.63 E-value=26 Score=32.27 Aligned_cols=48 Identities=23% Similarity=0.439 Sum_probs=27.7
Q ss_pred CCcEEEEecCCCccCCchhH-HHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccc
Q 013142 348 GIPVWVFSGDQDSVVPLLGS-RTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV 418 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~-~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmv 418 (449)
+-+||+++|..|.+-|..-. +..+++|+.. +.+ + + ++.+.+.+|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~-~~~--------------------~-~-~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAA-GFP--------------------H-N-VEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCT-T---------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHh-CCC--------------------C-c-ceEEEcCCCCcee
Confidence 78999999999999887654 3444554422 111 0 4 8889999999996
No 182
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=46.79 E-value=88 Score=28.40 Aligned_cols=57 Identities=21% Similarity=0.260 Sum_probs=35.1
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCccccc-----ccC
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP-----YAQ 422 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP-----~dq 422 (449)
..+|++..|..|..++....+...+.|+.. + .. .++.++.|++|=-. .++
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~-~-----------------------~~-~~~~~y~ga~HgF~~~~~~~~~ 199 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAA-G-----------------------VD-VEVHVYPGAGHGFANPSRPPYD 199 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCT-T-----------------------TT-EEEEEETT--TTTTSTTSTT--
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhc-C-----------------------Cc-EEEEECCCCcccccCCCCcccC
Confidence 689999999999999998887777775321 1 14 88899999999632 234
Q ss_pred hHHHHHH
Q 013142 423 PSRALHL 429 (449)
Q Consensus 423 P~~a~~m 429 (449)
++++.+.
T Consensus 200 ~~aa~~a 206 (218)
T PF01738_consen 200 PAAAEDA 206 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 183
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=46.74 E-value=11 Score=33.84 Aligned_cols=16 Identities=38% Similarity=0.870 Sum_probs=13.4
Q ss_pred CCCCeeEEecCCCChh
Q 013142 78 HEKPLTLWLNGGPGCS 93 (449)
Q Consensus 78 ~~~PlilWlnGGPG~S 93 (449)
.+.|-|+|+=|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 3578999999999964
No 184
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=45.16 E-value=84 Score=32.08 Aligned_cols=88 Identities=24% Similarity=0.261 Sum_probs=56.0
Q ss_pred CCCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCC-ccCchh
Q 013142 76 EPHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDY-NCGDAS 154 (449)
Q Consensus 76 ~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~-~~~~~~ 154 (449)
...++|+||..+|= |.|. .|. +.+-|=.=.+|.|+|+.- =-|=|.-... ++ .-+..+
T Consensus 59 k~~drPtV~~T~GY-~~~~---------~p~----------r~Ept~Lld~NQl~vEhR-fF~~SrP~p~-DW~~Lti~Q 116 (448)
T PF05576_consen 59 KDFDRPTVLYTEGY-NVST---------SPR----------RSEPTQLLDGNQLSVEHR-FFGPSRPEPA-DWSYLTIWQ 116 (448)
T ss_pred cCCCCCeEEEecCc-cccc---------Ccc----------ccchhHhhccceEEEEEe-eccCCCCCCC-CcccccHhH
Confidence 34678999998864 3321 122 123333345788988864 2233433221 11 236789
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEeccccccc
Q 013142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHY 189 (449)
Q Consensus 155 ~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~y 189 (449)
+|.|.....+.|-..+| .++.=+|-|=||+-
T Consensus 117 AA~D~Hri~~A~K~iY~----~kWISTG~SKGGmT 147 (448)
T PF05576_consen 117 AASDQHRIVQAFKPIYP----GKWISTGGSKGGMT 147 (448)
T ss_pred hhHHHHHHHHHHHhhcc----CCceecCcCCCcee
Confidence 99999999999977776 36999999999943
No 185
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=44.89 E-value=24 Score=31.19 Aligned_cols=63 Identities=21% Similarity=0.187 Sum_probs=42.9
Q ss_pred CCCCeeEEecCCCChhhhhhhhhhccC----CceecCCCCceeecc--CCccCCcceEEEEcCCCccccc
Q 013142 78 HEKPLTLWLNGGPGCSSVGGGAFTELG----PFYPRGDGRGLRRNS--MSWNKASNLLFVESPAGVGWSY 141 (449)
Q Consensus 78 ~~~PlilWlnGGPG~SS~~~g~f~E~G----P~~i~~~~~~~~~N~--~sW~~~anlLfIDqPvGtGfSy 141 (449)
+..+|=|-+.|| |||++.|++=.+.- -..+..+|-++...+ ..+.+-+-|=|+|...|.||-.
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f 144 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVV 144 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEE
Confidence 346799999999 99998544433322 234444444444444 4566778888999999999987
No 186
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=44.37 E-value=54 Score=31.22 Aligned_cols=64 Identities=31% Similarity=0.371 Sum_probs=40.6
Q ss_pred cCCcEEEEecC------CCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcC--Ccccc
Q 013142 347 NGIPVWVFSGD------QDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG--AAHMV 418 (449)
Q Consensus 347 ~~irVLiy~Gd------~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~--AGHmv 418 (449)
++++||-+.|+ -|.++|...++ .++.| +.-.. .. .+..+|.| |.|--
T Consensus 183 ~~i~VLnI~G~~~~g~~sDG~V~~~Ss~-sl~~L---~~~~~--------------------~~-Y~e~~v~G~~a~HS~ 237 (255)
T PF06028_consen 183 KNIQVLNIYGDLEDGSNSDGIVPNASSL-SLRYL---LKNRA--------------------KS-YQEKTVTGKDAQHSQ 237 (255)
T ss_dssp TT-EEEEEEEESBTTCSBTSSSBHHHHC-THHHH---CTTTS--------------------SE-EEEEEEESGGGSCCG
T ss_pred CCeEEEEEecccCCCCCCCeEEeHHHHH-HHHHH---hhccc--------------------Cc-eEEEEEECCCCcccc
Confidence 47999999999 78888877664 22221 11100 12 55566765 68988
Q ss_pred cccChHHHHHHHHHHhcC
Q 013142 419 PYAQPSRALHLFSSFVHG 436 (449)
Q Consensus 419 P~dqP~~a~~mi~~fl~~ 436 (449)
-.+.|+ +.+.|.+||-+
T Consensus 238 LheN~~-V~~~I~~FLw~ 254 (255)
T PF06028_consen 238 LHENPQ-VDKLIIQFLWG 254 (255)
T ss_dssp GGCCHH-HHHHHHHHHCT
T ss_pred CCCCHH-HHHHHHHHhcC
Confidence 778885 55777778865
No 187
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=43.87 E-value=63 Score=32.09 Aligned_cols=57 Identities=19% Similarity=0.292 Sum_probs=39.9
Q ss_pred CccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCC
Q 013142 148 YNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 219 (449)
Q Consensus 148 ~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng 219 (449)
+..++..+++.+++|-.+=+ .|+..++.|.|-|-||.-+...|.- .-++|++++-.-
T Consensus 287 ~p~n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvLDAt 343 (517)
T KOG1553|consen 287 YPVNTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVLDAT 343 (517)
T ss_pred CcccchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEeecc
Confidence 45676667766665544322 6778899999999999877777642 456889887443
No 188
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=43.80 E-value=39 Score=32.26 Aligned_cols=63 Identities=22% Similarity=0.396 Sum_probs=36.5
Q ss_pred CchhhHHHHHHHHHH-HHHHCC-----CCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 151 GDASTARDMHVFMMN-WYEKFP-----EFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 151 ~~~~~A~d~~~fL~~-F~~~fp-----~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
.+.+.+.++.++|.+ .-...| .+ ..+.|+|||=||+-+-.++. ++... ...+++++++..+|+
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al----~~~~~-~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMAL----GNASS-SLDLRFSALILLDPV 130 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHh----hhccc-ccccceeEEEEeccc
Confidence 344556666666655 112233 22 25999999999974433333 32111 125689999996664
No 189
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=43.26 E-value=20 Score=36.19 Aligned_cols=59 Identities=24% Similarity=0.352 Sum_probs=34.3
Q ss_pred CCCCeeEEecCCCCh--hhhhhhhhhccCCceecC--C---CCceeeccCCccCCcceEEEEcCCCcc
Q 013142 78 HEKPLTLWLNGGPGC--SSVGGGAFTELGPFYPRG--D---GRGLRRNSMSWNKASNLLFVESPAGVG 138 (449)
Q Consensus 78 ~~~PlilWlnGGPG~--SS~~~g~f~E~GP~~i~~--~---~~~~~~N~~sW~~~anlLfIDqPvGtG 138 (449)
++.|+=|-+.|-+|+ ||+ +-.+-.+|+=.-.. . ..+.++.+|.=-+.-||.+.|.| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSf-INalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSF-INALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHH-HHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHH-HHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 456888888887776 888 77777766532110 0 12344566777888999999999 988
No 190
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=42.89 E-value=34 Score=24.31 Aligned_cols=14 Identities=43% Similarity=0.596 Sum_probs=11.3
Q ss_pred eEEEEcCCCcccccc
Q 013142 128 LLFVESPAGVGWSYS 142 (449)
Q Consensus 128 lLfIDqPvGtGfSy~ 142 (449)
-+-++-| |+|+||.
T Consensus 41 ~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 41 RTTVGIP-GTGLSYR 54 (55)
T ss_pred EEEEEcC-CCccEEe
Confidence 4678889 9999984
No 191
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=42.12 E-value=54 Score=30.97 Aligned_cols=59 Identities=25% Similarity=0.504 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 154 STARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
+.++++..++++++.. +.+ ....+-|. |||---|.=+..+.+.. ++.|+.+|.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 5678889999998864 433 22333333 99988888888887753 388999999988753
No 192
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=41.63 E-value=34 Score=30.17 Aligned_cols=27 Identities=26% Similarity=0.379 Sum_probs=21.7
Q ss_pred CCCCCCeEEEecccccccHHHHHHHHH
Q 013142 172 EFKSRELFLTGESYAGHYIPQLADVLL 198 (449)
Q Consensus 172 ~~~~~~~yi~GESYgG~yvP~la~~i~ 198 (449)
.+..-|+.|-|.||||+....+|..+.
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~ 111 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQ 111 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhc
Confidence 555669999999999988777777654
No 193
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=41.06 E-value=16 Score=23.47 Aligned_cols=11 Identities=45% Similarity=1.189 Sum_probs=6.0
Q ss_pred CeeEEecCCCC
Q 013142 81 PLTLWLNGGPG 91 (449)
Q Consensus 81 PlilWlnGGPG 91 (449)
-=+||++|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 44799999998
No 194
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=40.97 E-value=48 Score=36.52 Aligned_cols=38 Identities=13% Similarity=0.151 Sum_probs=27.2
Q ss_pred CchhhHHHHHHHHHHHHHHC---CCCC---CCCeEEEecccccc
Q 013142 151 GDASTARDMHVFMMNWYEKF---PEFK---SRELFLTGESYAGH 188 (449)
Q Consensus 151 ~~~~~A~d~~~fL~~F~~~f---p~~~---~~~~yi~GESYgG~ 188 (449)
+..+.++-+.++++.-+..+ ++++ ...+.|.||||||.
T Consensus 151 ~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGi 194 (973)
T KOG3724|consen 151 ILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGI 194 (973)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhH
Confidence 45567787888777655543 4555 45699999999993
No 195
>KOG3101 consensus Esterase D [General function prediction only]
Probab=40.13 E-value=2.3e+02 Score=26.36 Aligned_cols=14 Identities=29% Similarity=0.446 Sum_probs=11.7
Q ss_pred CCCeEEEecccccc
Q 013142 175 SRELFLTGESYAGH 188 (449)
Q Consensus 175 ~~~~yi~GESYgG~ 188 (449)
..+.-|+|+|+|||
T Consensus 140 ~~k~~IfGHSMGGh 153 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGH 153 (283)
T ss_pred chhcceeccccCCC
Confidence 34689999999995
No 196
>PLN02561 triosephosphate isomerase
Probab=39.69 E-value=52 Score=31.31 Aligned_cols=59 Identities=17% Similarity=0.295 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 154 STARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
+.++++.+++++++.+ |..-....+-|. |||---|.-+.++... .++.|+.||.+-+|+
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 5778889999998854 432222233222 8999999999888765 348899999999986
No 197
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=39.25 E-value=20 Score=24.05 Aligned_cols=33 Identities=9% Similarity=0.158 Sum_probs=24.7
Q ss_pred CCCcCcccchhhHHHHHHhccCCChHHHHHHHh
Q 013142 218 NPLLRLDQDVPAIYEFFWSHGMISDEIGLTIMS 250 (449)
Q Consensus 218 ng~id~~~~~~~~~~~~~~~gli~~~~~~~~~~ 250 (449)
.|.+||.....-..+-|+..|+||++....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 366788776666667799999999999877654
No 198
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=39.14 E-value=31 Score=27.22 Aligned_cols=57 Identities=12% Similarity=0.100 Sum_probs=29.7
Q ss_pred eeEEecCCCChhhhhhhhhhcc---CCceecCCCCceeeccCC--ccCCcceEEEEcCCCccc
Q 013142 82 LTLWLNGGPGCSSVGGGAFTEL---GPFYPRGDGRGLRRNSMS--WNKASNLLFVESPAGVGW 139 (449)
Q Consensus 82 lilWlnGGPG~SS~~~g~f~E~---GP~~i~~~~~~~~~N~~s--W~~~anlLfIDqPvGtGf 139 (449)
|=|-+.|| |||++.+++=.+. +-..+..+|-++...+.| ..+-+-|=|++...|.||
T Consensus 28 LRi~v~~g-GCsG~~Y~~~ld~~~~~D~v~~~~gv~v~vD~~s~~~l~G~~iDy~~~~~g~gF 89 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNLIADEEKEGDEIEKIHDLTFLIDKNLIDQFGGFSIECAEENFGAGF 89 (92)
T ss_pred EEEEEeCC-CccCcccceEecCCCCCCEEEEeCCEEEEECHHHHHHhCCCEEEEecCCCCCcE
Confidence 88889999 9999854443222 111222223333333322 233344556666666665
No 199
>PRK07868 acyl-CoA synthetase; Validated
Probab=39.04 E-value=1.1e+02 Score=35.31 Aligned_cols=20 Identities=35% Similarity=0.476 Sum_probs=14.8
Q ss_pred CCCeEEEecccccccHHHHH
Q 013142 175 SRELFLTGESYAGHYIPQLA 194 (449)
Q Consensus 175 ~~~~yi~GESYgG~yvP~la 194 (449)
..++++.|+|+||..+-.+|
T Consensus 140 ~~~v~lvG~s~GG~~a~~~a 159 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAA 159 (994)
T ss_pred CCceEEEEEChhHHHHHHHH
Confidence 35799999999995544443
No 200
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=38.65 E-value=28 Score=31.89 Aligned_cols=124 Identities=15% Similarity=0.098 Sum_probs=52.0
Q ss_pred CCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCcc-CCcceEEEEcCCCc----ccccc---------CC
Q 013142 79 EKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGV----GWSYS---------NT 144 (449)
Q Consensus 79 ~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~-~~anlLfIDqPvGt----GfSy~---------~~ 144 (449)
++|=||.|+|. |.|+. + +=...++++-. .. ..+.++|+|-|.-+ |.... ..
T Consensus 3 ~k~riLcLHG~-~~na~-i-f~~q~~~l~~~------------l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~ 67 (212)
T PF03959_consen 3 RKPRILCLHGY-GQNAE-I-FRQQTSALRKA------------LKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDP 67 (212)
T ss_dssp ---EEEEE--T-T--HH-H-HHHHTHHHHHH------------HHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHT
T ss_pred CCceEEEeCCC-CcCHH-H-HHHHHHHHHHH------------HhhCcEEEEEecCCcccCCcccccccccccccccCCC
Confidence 57889999988 77765 2 11123333321 22 26788888887655 32211 11
Q ss_pred CCCC---cc----CchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEec
Q 013142 145 TSDY---NC----GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIG 217 (449)
Q Consensus 145 ~~~~---~~----~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iG 217 (449)
...+ .. ......++..+.|.+++++..-| -=|.|-|=|+..+..|+....+.... ....++|-+++.
T Consensus 68 ~~~~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~--~~~~~~kf~V~~ 141 (212)
T PF03959_consen 68 GPFYSWWDPDDDDHEYEGLDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPD--GAHPPFKFAVFI 141 (212)
T ss_dssp T--EESS---S-SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST----T----SEEEEE
T ss_pred CcceeeeecCCCcccccCHHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhccc--ccCCCceEEEEE
Confidence 1111 11 11233455666777777654322 34999999996666666554443321 124567888887
Q ss_pred CCCcCc
Q 013142 218 NPLLRL 223 (449)
Q Consensus 218 ng~id~ 223 (449)
+|+.-+
T Consensus 142 sg~~p~ 147 (212)
T PF03959_consen 142 SGFPPP 147 (212)
T ss_dssp S----E
T ss_pred cccCCC
Confidence 887544
No 201
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=37.49 E-value=26 Score=27.14 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHh
Q 013142 157 RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDH 200 (449)
Q Consensus 157 ~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (449)
-|+|++.+.|+-++ |..+.|.+-|+|| .+-+-|.+-
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~------~IlhNIyrl 42 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSN------AILHNIYRL 42 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchH------HHHHHHHHH
Confidence 36888889988775 4466899999999 555555553
No 202
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=37.43 E-value=40 Score=34.83 Aligned_cols=45 Identities=11% Similarity=0.180 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCC-CCeEEEecccccccHHHHHHHH
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVL 197 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~-~~~yi~GESYgG~yvP~la~~i 197 (449)
.+..++.+.-|+..++..=+..+ +++.|.+||+||.|+=++-...
T Consensus 158 ~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 158 SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 45566677777777765334444 8999999999998876665543
No 203
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=36.97 E-value=46 Score=30.29 Aligned_cols=56 Identities=27% Similarity=0.338 Sum_probs=37.7
Q ss_pred CCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccccccChHHHH
Q 013142 348 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 427 (449)
Q Consensus 348 ~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP~dqP~~a~ 427 (449)
-..++|.+|+.|-++. +...++|+.. .. ++.+++.+|.|+-.-.-. ...
T Consensus 149 P~~~lvi~g~~Ddvv~------l~~~l~~~~~-----------------------~~-~~~i~i~~a~HFF~gKl~-~l~ 197 (210)
T COG2945 149 PSPGLVIQGDADDVVD------LVAVLKWQES-----------------------IK-ITVITIPGADHFFHGKLI-ELR 197 (210)
T ss_pred CCCceeEecChhhhhc------HHHHHHhhcC-----------------------CC-CceEEecCCCceecccHH-HHH
Confidence 4789999999995544 4445444311 13 889999999999876544 444
Q ss_pred HHHHHHh
Q 013142 428 HLFSSFV 434 (449)
Q Consensus 428 ~mi~~fl 434 (449)
+.+..|+
T Consensus 198 ~~i~~~l 204 (210)
T COG2945 198 DTIADFL 204 (210)
T ss_pred HHHHHHh
Confidence 4555565
No 204
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=36.45 E-value=61 Score=31.69 Aligned_cols=72 Identities=10% Similarity=0.115 Sum_probs=39.8
Q ss_pred CchhhHHHHHHHHHHHHHHCCC-CCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcccch
Q 013142 151 GDASTARDMHVFMMNWYEKFPE-FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDV 227 (449)
Q Consensus 151 ~~~~~A~d~~~fL~~F~~~fp~-~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~~~ 227 (449)
+-+..++|+-++++-+-..... +...++.|.|||=|..=+-+.. ...+... ..-.++|+|+-.|+-|.+...
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl---~~~~~~~--~~~~VdG~ILQApVSDREa~~ 154 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYL---SSPNPSP--SRPPVDGAILQAPVSDREAIL 154 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHH---HH-TT-----CCCEEEEEEEEE---TTSTT
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHH---hccCccc--cccceEEEEEeCCCCChhHhh
Confidence 5566788887777766555322 3456899999999994433332 2222110 135699999999988876543
No 205
>COG3150 Predicted esterase [General function prediction only]
Probab=36.16 E-value=66 Score=28.65 Aligned_cols=58 Identities=19% Similarity=0.220 Sum_probs=38.7
Q ss_pred CchhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcccchh
Q 013142 151 GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVP 228 (449)
Q Consensus 151 ~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~~~~ 228 (449)
...++++.+-..++ ++..+..-|+|-|-|| +.|.+|-.... |+.+ |.||.+-|...+.
T Consensus 41 ~p~~a~~ele~~i~-------~~~~~~p~ivGssLGG----Y~At~l~~~~G--------irav-~~NPav~P~e~l~ 98 (191)
T COG3150 41 DPQQALKELEKAVQ-------ELGDESPLIVGSSLGG----YYATWLGFLCG--------IRAV-VFNPAVRPYELLT 98 (191)
T ss_pred CHHHHHHHHHHHHH-------HcCCCCceEEeecchH----HHHHHHHHHhC--------Chhh-hcCCCcCchhhhh
Confidence 44456666666666 5666778999999999 77777766542 4454 4578777765443
No 206
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.88 E-value=78 Score=31.69 Aligned_cols=63 Identities=17% Similarity=0.223 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccC-CCC-ceeeeeeeEecCCCcCcc
Q 013142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH-SKG-FKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 155 ~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~-~~~-~~inLkGi~iGng~id~~ 224 (449)
...++-.+|+...+.-| -.++||.+||+|. .++.+.+++-.. ..+ ....++=+++-.|-+|-.
T Consensus 173 Sr~aLe~~lr~La~~~~---~~~I~ilAHSMGt----wl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 173 SRPALERLLRYLATDKP---VKRIYLLAHSMGT----WLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred hHHHHHHHHHHHHhCCC---CceEEEEEecchH----HHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 34444445554444333 3579999999999 666666655321 112 345677888877776654
No 207
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=35.82 E-value=79 Score=30.02 Aligned_cols=59 Identities=22% Similarity=0.445 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 154 STARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
+.++++.+|+++++.. +.+ ....+-|. |||---|.-+..+... .++.|+.+|.+.+++.
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYGE-VAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechH
Confidence 6788899999998863 431 12233232 9999999999888765 3488999999988764
No 208
>PF15240 Pro-rich: Proline-rich
Probab=35.77 E-value=24 Score=31.50 Aligned_cols=15 Identities=13% Similarity=0.184 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHhhh
Q 013142 13 SLVVLLLLVSRSNVV 27 (449)
Q Consensus 13 ~~~~~~~~~~~~~~~ 27 (449)
|+||+++||+||.+.
T Consensus 3 lVLLSvALLALSSAQ 17 (179)
T PF15240_consen 3 LVLLSVALLALSSAQ 17 (179)
T ss_pred hHHHHHHHHHhhhcc
Confidence 444555666665553
No 209
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=35.76 E-value=42 Score=32.32 Aligned_cols=49 Identities=24% Similarity=0.589 Sum_probs=35.5
Q ss_pred ccCCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccc
Q 013142 122 WNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAG 187 (449)
Q Consensus 122 W~~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG 187 (449)
.++.+-||-||-|+|+|.|. .|+++.+-|- |..||+++--.+|+ .|||+
T Consensus 67 f~enSkvI~VeGnI~sGK~k-------------lAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~ 115 (393)
T KOG3877|consen 67 FHENSKVIVVEGNIGSGKTK-------------LAKELAEQLG--FVHFPEFRMDDIYV--DSYGN 115 (393)
T ss_pred hcccceEEEEeCCcccCchh-------------HHHHHHHHhC--Ccccccccccceee--cccCc
Confidence 45567899999999999763 4444444333 46799988766776 78988
No 210
>COG4425 Predicted membrane protein [Function unknown]
Probab=35.55 E-value=49 Score=33.94 Aligned_cols=35 Identities=26% Similarity=0.521 Sum_probs=30.4
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEeccccc
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAG 187 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG 187 (449)
.++|+.+++..-...++.|+=...++|+.|||-|.
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa 408 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGA 408 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEecccccc
Confidence 36788899999999999998777789999999987
No 211
>COG3698 Predicted periplasmic protein [Function unknown]
Probab=35.36 E-value=1.6e+02 Score=27.25 Aligned_cols=28 Identities=29% Similarity=0.539 Sum_probs=20.7
Q ss_pred CCCCeeEEecCC---CChhhhhhhhhhccCCce
Q 013142 78 HEKPLTLWLNGG---PGCSSVGGGAFTELGPFY 107 (449)
Q Consensus 78 ~~~PlilWlnGG---PG~SS~~~g~f~E~GP~~ 107 (449)
.-+-+++-+||| |+-+=+ |++.|+|-=+
T Consensus 76 qg~~l~fAmN~GmY~~d~~Pl--GL~VE~G~e~ 106 (250)
T COG3698 76 QGQSLLFAMNGGMYHPDYAPL--GLYVENGKEQ 106 (250)
T ss_pred ccceEEEEecCcccCCCCCcc--eEEecCCeee
Confidence 445699999999 666554 8999988444
No 212
>PRK14565 triosephosphate isomerase; Provisional
Probab=34.82 E-value=59 Score=30.61 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=39.8
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
.+.++++.++++++. . ++-|. |||---|.-+..+.++. ++.|+.||.+.+++.
T Consensus 173 ~e~i~~~~~~Ir~~~-------~-~~~Il---YGGSV~~~N~~~l~~~~--------~iDG~LvG~asl~~~ 225 (237)
T PRK14565 173 NDAIAEAFEIIRSYD-------S-KSHII---YGGSVNQENIRDLKSIN--------QLSGVLVGSASLDVD 225 (237)
T ss_pred HHHHHHHHHHHHHhC-------C-CceEE---EcCccCHhhHHHHhcCC--------CCCEEEEechhhcHH
Confidence 366888888998762 1 22222 99999999999988743 488999999998775
No 213
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=34.21 E-value=89 Score=33.10 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=22.6
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEecccccccHHHH
Q 013142 160 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQL 193 (449)
Q Consensus 160 ~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~l 193 (449)
.+++++....|- =..+++-|+|||.||..|-.+
T Consensus 180 L~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 180 LRWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred HHHHHHHHHhcC-CCCCeEEEEeechhHHHHHHH
Confidence 356666666664 234579999999999666443
No 214
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=34.01 E-value=59 Score=29.70 Aligned_cols=83 Identities=20% Similarity=0.388 Sum_probs=52.7
Q ss_pred eccCCccCCcceEEEEcC---CCccccccCCCCCCccCchhhHHHHHHHHHHHHHH--CCCCCCCCeEEEecccccccHH
Q 013142 117 RNSMSWNKASNLLFVESP---AGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEK--FPEFKSRELFLTGESYAGHYIP 191 (449)
Q Consensus 117 ~N~~sW~~~anlLfIDqP---vGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~--fp~~~~~~~yi~GESYgG~yvP 191 (449)
++--+|.+.. |--+ | +|||.-- ..+.|+++.+.|++|++. -+.-...--.|.|-|--|
T Consensus 151 d~v~~w~niv--iAYE-PVWAIGTGk~a----------tp~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~g---- 213 (247)
T KOG1643|consen 151 DKVKDWSNIV--IAYE-PVWAIGTGKTA----------TPEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVNG---- 213 (247)
T ss_pred HhcCCccceE--EEee-ceeeecCCCCC----------CHHHHHHHHHHHHHHHhhcchhhhhhceEEEecccccc----
Confidence 3445576542 2223 4 5888542 237899999999999986 333333345676666666
Q ss_pred HHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 192 QLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 192 ~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
.-+..|.+.. .+.|+.+|..-+-|+
T Consensus 214 ~N~~el~~~~--------diDGFLVGGaSLKpe 238 (247)
T KOG1643|consen 214 GNCKELAKKP--------DIDGFLVGGASLKPE 238 (247)
T ss_pred ccHHHhcccc--------cccceEEcCcccChH
Confidence 5555555543 388999999887765
No 215
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=33.78 E-value=80 Score=28.71 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=39.6
Q ss_pred CeeEEecCCCChhhhhhhhhh----cc--CCceecCCCCceee--ccCCccCCcceEEEEcCCCccccccCC
Q 013142 81 PLTLWLNGGPGCSSVGGGAFT----EL--GPFYPRGDGRGLRR--NSMSWNKASNLLFVESPAGVGWSYSNT 144 (449)
Q Consensus 81 PlilWlnGGPG~SS~~~g~f~----E~--GP~~i~~~~~~~~~--N~~sW~~~anlLfIDqPvGtGfSy~~~ 144 (449)
.|=|-+.|| |||++.+++-. |. +-..+..+|-++.. ....+.+-+-|=|+|...|.||...++
T Consensus 24 ~LRI~V~~g-GCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NP 94 (192)
T PRK11190 24 QIRVFVINP-GTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAP 94 (192)
T ss_pred eEEEEEECC-CcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECC
Confidence 355556666 99987544333 11 11333334444443 345577888999999999999999654
No 216
>PTZ00333 triosephosphate isomerase; Provisional
Probab=31.95 E-value=80 Score=30.10 Aligned_cols=60 Identities=18% Similarity=0.378 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 153 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
.+.++++..++++++.. +..-....+-|. |||---|.-+..+... .++.|+.||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 36788899999998853 432222222222 9999999999988765 348899999998874
No 217
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=31.46 E-value=45 Score=28.08 Aligned_cols=13 Identities=31% Similarity=0.677 Sum_probs=8.5
Q ss_pred hhhhccCCceecC
Q 013142 98 GAFTELGPFYPRG 110 (449)
Q Consensus 98 g~f~E~GP~~i~~ 110 (449)
|.+...|.+.-+.
T Consensus 76 g~Yd~~g~~~~~~ 88 (130)
T PF12273_consen 76 GYYDQQGNFHPNP 88 (130)
T ss_pred CCCCCCCCCCCCC
Confidence 5666677776653
No 218
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=31.04 E-value=25 Score=29.63 Aligned_cols=11 Identities=18% Similarity=0.649 Sum_probs=5.9
Q ss_pred ccchhHHHHHH
Q 013142 3 RWCFGGFLNIS 13 (449)
Q Consensus 3 ~~~~~~~~~~~ 13 (449)
||.|-.++-++
T Consensus 1 RW~l~~iii~~ 11 (130)
T PF12273_consen 1 RWVLFAIIIVA 11 (130)
T ss_pred CeeeHHHHHHH
Confidence 77765444333
No 219
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=30.99 E-value=88 Score=33.50 Aligned_cols=50 Identities=14% Similarity=0.292 Sum_probs=38.3
Q ss_pred HHHHhcCCcEEEEecCCCccCCchhHHHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCccccc
Q 013142 342 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 419 (449)
Q Consensus 342 ~~LL~~~irVLiy~Gd~D~i~~~~g~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmvP 419 (449)
+.|++-+.+||++.|..|..|.-.--|..-++|... -..++|.+|+|-+-
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~----------------------------~elhVI~~adhsma 347 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAE----------------------------VELHVIGGADHSMA 347 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhcc----------------------------ceEEEecCCCcccc
Confidence 456777999999999999999987777766665322 34588889999754
No 220
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=29.40 E-value=62 Score=29.29 Aligned_cols=40 Identities=23% Similarity=0.576 Sum_probs=22.7
Q ss_pred ceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHH
Q 013142 127 NLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEK 169 (449)
Q Consensus 127 nlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~ 169 (449)
++|+.|+|=++|..+.... ..++....++..+++..++..
T Consensus 2 dliitDPPY~~~~~~~~~~---~~~~~~~~~~y~~~~~~~~~~ 41 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNYF---DYGDNKNHEEYLEWMEEWLKE 41 (231)
T ss_dssp EEEEE---TSSSCS--------CSCHCCHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhh---hccCCCCHHHHHHHHHHHHHH
Confidence 6899999999999862211 124444566677777777654
No 221
>TIGR03598 GTPase_YsxC ribosome biogenesis GTP-binding protein YsxC/EngB. Members of this protein family are a GTPase associated with ribosome biogenesis, typified by YsxC from Bacillus subutilis. The family is widely but not universally distributed among bacteria. Members commonly are called EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic (probably organellar) sequences. This protein is found in about 80 percent of bacterial genomes.
Probab=28.75 E-value=2.7e+02 Score=24.23 Aligned_cols=62 Identities=23% Similarity=0.249 Sum_probs=32.6
Q ss_pred CCCCCCeeEEecCCCCh--hhhhhhhhhccC-CceecC-CCCceeeccCCccCCcceEEEEcCCCccccc
Q 013142 76 EPHEKPLTLWLNGGPGC--SSVGGGAFTELG-PFYPRG-DGRGLRRNSMSWNKASNLLFVESPAGVGWSY 141 (449)
Q Consensus 76 ~~~~~PlilWlnGGPG~--SS~~~g~f~E~G-P~~i~~-~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy 141 (449)
.|.++..-+-+-|-||+ ||+ +-.+.... .-.+.. .+.+...+.+.+++ ++.++|-| |.|.+.
T Consensus 13 ~~~~~~~~i~ivG~~~~GKStl-in~l~~~~~~~~~~~~~~~t~~~~~~~~~~--~~~liDtp-G~~~~~ 78 (179)
T TIGR03598 13 LPPDDGPEIAFAGRSNVGKSSL-INALTNRKKLARTSKTPGRTQLINFFEVND--GFRLVDLP-GYGYAK 78 (179)
T ss_pred CCCCCCCEEEEEcCCCCCHHHH-HHHHhCCCCcccccCCCCcceEEEEEEeCC--cEEEEeCC-CCcccc
Confidence 45566667777777665 677 45544321 111111 11122223333332 79999999 877653
No 222
>PRK09502 iscA iron-sulfur cluster assembly protein; Provisional
Probab=28.07 E-value=77 Score=25.64 Aligned_cols=64 Identities=22% Similarity=0.293 Sum_probs=40.0
Q ss_pred CCeeEEecCCCChhhhhhhhh--hccCC--ceecCCCCcee--eccCCccCCcceEEEEcCCCccccccCC
Q 013142 80 KPLTLWLNGGPGCSSVGGGAF--TELGP--FYPRGDGRGLR--RNSMSWNKASNLLFVESPAGVGWSYSNT 144 (449)
Q Consensus 80 ~PlilWlnGGPG~SS~~~g~f--~E~GP--~~i~~~~~~~~--~N~~sW~~~anlLfIDqPvGtGfSy~~~ 144 (449)
..|=|-+.+| |||++.+.+- .|..+ ..+..++-++. ++...+.+-+-|=|+|.+.|.||...++
T Consensus 24 ~~LRi~v~~~-GCsG~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NP 93 (107)
T PRK09502 24 FGLRLGVRTS-GCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNP 93 (107)
T ss_pred ceEEEEEECC-CcCCeeeEeeecCCCCCCCEEEEcCCeEEEEeHHHHhHhCCCEEEEeeCCCCceEEEECC
Confidence 3466667755 9998743432 34333 22333333322 3456788888999999999999988543
No 223
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=27.91 E-value=1.9e+02 Score=26.85 Aligned_cols=39 Identities=21% Similarity=0.382 Sum_probs=26.7
Q ss_pred CCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 174 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 174 ~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
+...+|++.+|||| ++...++++... .-.+-.|++.+..
T Consensus 188 ~~~sv~vvahsyGG----~~t~~l~~~f~~----d~~v~aialTDs~ 226 (297)
T KOG3967|consen 188 KAESVFVVAHSYGG----SLTLDLVERFPD----DESVFAIALTDSA 226 (297)
T ss_pred CcceEEEEEeccCC----hhHHHHHHhcCC----ccceEEEEeeccc
Confidence 34579999999999 777777776532 1336677775443
No 224
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=27.24 E-value=85 Score=28.45 Aligned_cols=117 Identities=16% Similarity=0.111 Sum_probs=60.9
Q ss_pred CCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCccccccCCCCCCc----cCc
Q 013142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYN----CGD 152 (449)
Q Consensus 77 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtGfSy~~~~~~~~----~~~ 152 (449)
.+..|+|++|+|+++.++. +.. ..+ +. .+. + ..-+.+|..|.| |.|.+... -+-+. ...
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~--~~~---~~----~~a-~----~~g~~Vv~Pd~~-g~~~~~~~-~~~~~~~~~~~~ 72 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVI--DWG---WK----AAA-D----RYGFVLVAPEQT-SYNSSNNC-WDWFFTHHRARG 72 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-Hhh--hcC---hH----HHH-H----hCCeEEEecCCc-CccccCCC-CCCCCccccCCC
Confidence 3568999999999876654 210 000 00 000 0 123577888877 54432210 00000 001
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 153 ASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
.....++.+++....++++ ....+++|+|+|.|| .+|..+.... +-.+.++++..|..
T Consensus 73 ~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg----~~a~~~a~~~------p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 73 TGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGG----GMTAVLGCTY------PDVFAGGASNAGLP 130 (212)
T ss_pred CccHHHHHHHHHHHHHhcC-cChhheEEEEECHHH----HHHHHHHHhC------chhheEEEeecCCc
Confidence 1223444455555445553 444579999999999 5555554433 22367777666643
No 225
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=27.23 E-value=49 Score=35.46 Aligned_cols=39 Identities=8% Similarity=0.049 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHCCCCC-CCCeEEEecccccccHHHHHH
Q 013142 157 RDMHVFMMNWYEKFPEFK-SRELFLTGESYAGHYIPQLAD 195 (449)
Q Consensus 157 ~d~~~fL~~F~~~fp~~~-~~~~yi~GESYgG~yvP~la~ 195 (449)
++.+.-|++.++..=+.. ++++.|.|||+||.++=+|-.
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHH
Confidence 344444555544321223 579999999999966555544
No 226
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=27.10 E-value=68 Score=29.83 Aligned_cols=48 Identities=19% Similarity=0.213 Sum_probs=30.0
Q ss_pred HHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 163 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 163 L~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
++....++ ..-.+.+|++|.|-||. ++..|.-.. +--+.++++..|..
T Consensus 85 v~~v~~~~-~iD~~RVyv~G~S~Gg~----ma~~la~~~------pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 85 VDYVAARY-NIDPSRVYVTGLSNGGM----MANVLACAY------PDLFAAVAVVSGVP 132 (220)
T ss_pred HHhHhhhc-ccCCCceeeEEECHHHH----HHHHHHHhC------CccceEEEeecccc
Confidence 33333444 45567899999999994 444444332 23377888877753
No 227
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=25.84 E-value=54 Score=27.66 Aligned_cols=17 Identities=35% Similarity=0.516 Sum_probs=14.4
Q ss_pred CCCCCeeEEecCCCChh
Q 013142 77 PHEKPLTLWLNGGPGCS 93 (449)
Q Consensus 77 ~~~~PlilWlnGGPG~S 93 (449)
..++||||-|+|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 35689999999999973
No 228
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=25.72 E-value=1.2e+02 Score=28.86 Aligned_cols=52 Identities=23% Similarity=0.234 Sum_probs=33.9
Q ss_pred HHHHHHHH-CCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 162 FMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 162 fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
.|..+... ++ ....+++|+|+|+|| ++|..+..+.. -.+++++..+|+.++.
T Consensus 124 ~l~~~~~~~~~-~~~~~~~~~G~S~GG----~~a~~~a~~~p------~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 124 ELPALVAAQFP-LDGERQGITGHSMGG----HGALVIALKNP------DRFKSVSAFAPIVAPS 176 (275)
T ss_pred HHHHHHHhhCC-CCCCceEEEEEChhH----HHHHHHHHhCc------ccceEEEEECCccCcc
Confidence 33334433 43 445679999999999 55655554432 2378999888887753
No 229
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=25.64 E-value=2e+02 Score=27.63 Aligned_cols=92 Identities=24% Similarity=0.296 Sum_probs=52.2
Q ss_pred CCCCCeeEEecCCCChhhhhhhhhhccCCceecCCCCceeeccCCccCCcceEEEEcCCCcc--ccccCCCCCCccCchh
Q 013142 77 PHEKPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVG--WSYSNTTSDYNCGDAS 154 (449)
Q Consensus 77 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~~~anlLfIDqPvGtG--fSy~~~~~~~~~~~~~ 154 (449)
++..|+|+|=-=|-.|||..++.|.|. ..| .+= .-+.-+| +|-| -|+ -..-.+
T Consensus 21 ~s~~P~ii~HGigd~c~~~~~~~~~q~------------l~~-~~g---~~v~~le--ig~g~~~s~-------l~pl~~ 75 (296)
T KOG2541|consen 21 PSPVPVIVWHGIGDSCSSLSMANLTQL------------LEE-LPG---SPVYCLE--IGDGIKDSS-------LMPLWE 75 (296)
T ss_pred cccCCEEEEeccCcccccchHHHHHHH------------HHh-CCC---CeeEEEE--ecCCcchhh-------hccHHH
Confidence 344899999888999999434666641 111 110 1111222 1222 111 123334
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhcc
Q 013142 155 TARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNA 202 (449)
Q Consensus 155 ~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~ 202 (449)
.++.+.+.++ ..|++ ++-++|.|+|=|| .+|+.+++.-+
T Consensus 76 Qv~~~ce~v~----~m~~l-sqGynivg~SQGg----lv~Raliq~cd 114 (296)
T KOG2541|consen 76 QVDVACEKVK----QMPEL-SQGYNIVGYSQGG----LVARALIQFCD 114 (296)
T ss_pred HHHHHHHHHh----cchhc-cCceEEEEEcccc----HHHHHHHHhCC
Confidence 4444444444 45555 4579999999999 88888887654
No 230
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=25.26 E-value=1.3e+02 Score=19.57 Aligned_cols=27 Identities=11% Similarity=0.337 Sum_probs=12.3
Q ss_pred eEEEEEEEecCCCCCCCeeEEecCCCC
Q 013142 65 SLFYYFVEAEVEPHEKPLTLWLNGGPG 91 (449)
Q Consensus 65 ~lFy~f~es~~~~~~~PlilWlnGGPG 91 (449)
+-+|||-.+........--+|+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceEEEEeCCC
Confidence 456666333333333334444445664
No 231
>PRK06762 hypothetical protein; Provisional
Probab=25.07 E-value=41 Score=29.21 Aligned_cols=12 Identities=17% Similarity=0.437 Sum_probs=10.9
Q ss_pred CeeEEecCCCCh
Q 013142 81 PLTLWLNGGPGC 92 (449)
Q Consensus 81 PlilWlnGGPG~ 92 (449)
|.++|+.|.|||
T Consensus 2 ~~li~i~G~~Gs 13 (166)
T PRK06762 2 TTLIIIRGNSGS 13 (166)
T ss_pred CeEEEEECCCCC
Confidence 789999999987
No 232
>PRK15492 triosephosphate isomerase; Provisional
Probab=24.58 E-value=1.4e+02 Score=28.51 Aligned_cols=59 Identities=20% Similarity=0.310 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHH-HCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 154 STARDMHVFMMNWYE-KFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~-~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
+.+++..+++++++. .+-+- ...+-|. |||---|.-+..|.... ++.|+.||..-+++.
T Consensus 189 e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~--------diDG~LvG~aSl~~~ 248 (260)
T PRK15492 189 DYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP--------HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC--------CCCEEEeehhhcCHH
Confidence 567788899999864 34322 2233332 99999999999998754 488999999988875
No 233
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=24.37 E-value=1.6e+02 Score=26.66 Aligned_cols=63 Identities=13% Similarity=0.101 Sum_probs=40.9
Q ss_pred CeeEEecCCCChhhhhhhhh----hccCC--ceecCCCCcee--eccCCccCCcceEEEEcCCCccccccCC
Q 013142 81 PLTLWLNGGPGCSSVGGGAF----TELGP--FYPRGDGRGLR--RNSMSWNKASNLLFVESPAGVGWSYSNT 144 (449)
Q Consensus 81 PlilWlnGGPG~SS~~~g~f----~E~GP--~~i~~~~~~~~--~N~~sW~~~anlLfIDqPvGtGfSy~~~ 144 (449)
.|=|-+.|| |||++.+++= .|..+ ..+..+|-++. +....+.+-+-|=|++...|.||...++
T Consensus 23 ~LRv~V~~g-GCsG~~Y~l~~~~~~~~~~~D~v~e~~g~~v~Vd~~s~~~L~g~~IDyve~~~g~gF~f~NP 93 (190)
T TIGR03341 23 GIRVFVVNP-GTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDFVTDRMGGQLTLKAP 93 (190)
T ss_pred eEEEEEECC-ccCCceeeeEEcccCCCCCCCEEEEeCCEEEEEccchhhHhCCCEEEEeecCCCceeEEeCC
Confidence 466777776 9998754441 12211 22333343333 3556788889999999999999998654
No 234
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=23.89 E-value=95 Score=27.79 Aligned_cols=25 Identities=20% Similarity=0.255 Sum_probs=19.3
Q ss_pred CcEEEEecCCCccCCchhHHHHHHH
Q 013142 349 IPVWVFSGDQDSVVPLLGSRTLIRE 373 (449)
Q Consensus 349 irVLiy~Gd~D~i~~~~g~~~~i~~ 373 (449)
.+.+++.-..|..|++.-++.+.+.
T Consensus 118 fps~vvaSrnDp~~~~~~a~~~a~~ 142 (181)
T COG3545 118 FPSVVVASRNDPYVSYEHAEDLANA 142 (181)
T ss_pred CceeEEEecCCCCCCHHHHHHHHHh
Confidence 5677778888888888877777666
No 235
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=23.22 E-value=2.5e+02 Score=28.01 Aligned_cols=58 Identities=17% Similarity=0.116 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCc
Q 013142 159 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 221 (449)
Q Consensus 159 ~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~i 221 (449)
.-..|-+.+....+ -.||+.|.|+|.|++-+=+-..++.++... .+-=.=+++|.|..
T Consensus 204 aG~~LA~~L~~~~~-G~RpVtLvG~SLGarvI~~cL~~L~~~~~~----~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 204 AGKVLADALLSRNQ-GERPVTLVGHSLGARVIYYCLLELAERKAF----GLVENVVLMGAPVP 261 (345)
T ss_pred HHHHHHHHHHHhcC-CCCceEEEeecccHHHHHHHHHHHHhcccc----CeEeeEEEecCCCC
Confidence 33344444433323 578999999999998888888888776432 23223455666643
No 236
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=23.16 E-value=1.2e+02 Score=33.13 Aligned_cols=61 Identities=21% Similarity=0.406 Sum_probs=44.4
Q ss_pred hhhHHHHHHHHHHHHHH-CCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcc
Q 013142 153 ASTARDMHVFMMNWYEK-FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 224 (449)
Q Consensus 153 ~~~A~d~~~fL~~F~~~-fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~ 224 (449)
.+.|+++..+|++++.. |..-....+=|. |||---|.-+..|.... ++.|+.||..-+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP--------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEeehHhcCHH
Confidence 36788899999999853 422111122222 99999999999998764 488999999988774
No 237
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=23.15 E-value=1.1e+02 Score=29.63 Aligned_cols=19 Identities=37% Similarity=0.716 Sum_probs=15.3
Q ss_pred CCCeEEEecccccccHHHHHHHH
Q 013142 175 SRELFLTGESYAGHYIPQLADVL 197 (449)
Q Consensus 175 ~~~~yi~GESYgG~yvP~la~~i 197 (449)
...++++|||-|| ++|..+
T Consensus 275 da~iwlTGHSLGG----a~AsLl 293 (425)
T KOG4540|consen 275 DARIWLTGHSLGG----AIASLL 293 (425)
T ss_pred CceEEEeccccch----HHHHHh
Confidence 5679999999999 666544
No 238
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=23.15 E-value=1.1e+02 Score=29.63 Aligned_cols=19 Identities=37% Similarity=0.716 Sum_probs=15.3
Q ss_pred CCCeEEEecccccccHHHHHHHH
Q 013142 175 SRELFLTGESYAGHYIPQLADVL 197 (449)
Q Consensus 175 ~~~~yi~GESYgG~yvP~la~~i 197 (449)
...++++|||-|| ++|..+
T Consensus 275 da~iwlTGHSLGG----a~AsLl 293 (425)
T COG5153 275 DARIWLTGHSLGG----AIASLL 293 (425)
T ss_pred CceEEEeccccch----HHHHHh
Confidence 5679999999999 666544
No 239
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=22.91 E-value=48 Score=29.03 Aligned_cols=13 Identities=38% Similarity=0.882 Sum_probs=10.6
Q ss_pred CCeeEEecCCCCh
Q 013142 80 KPLTLWLNGGPGC 92 (449)
Q Consensus 80 ~PlilWlnGGPG~ 92 (449)
+|.+|||.|=||+
T Consensus 1 ~g~vIwltGlsGs 13 (156)
T PF01583_consen 1 KGFVIWLTGLSGS 13 (156)
T ss_dssp S-EEEEEESSTTS
T ss_pred CCEEEEEECCCCC
Confidence 5899999999886
No 240
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=22.21 E-value=1.1e+02 Score=31.26 Aligned_cols=35 Identities=29% Similarity=0.707 Sum_probs=25.6
Q ss_pred eEEEEEEeeCCCCeeEEEEEEEecCCCCCCCee-EEecC
Q 013142 51 QYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLT-LWLNG 88 (449)
Q Consensus 51 ~~sGyl~v~~~~~~~lFy~f~es~~~~~~~Pli-lWlnG 88 (449)
..+||++++. .+++.. ..|+.....+.||| +||.|
T Consensus 200 ~k~GfLTmDq--tRkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 200 YKSGFLTMDQ--TRKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccceeeEcc--ccceEE-EeccCCCccCCCceeeEecC
Confidence 5799999974 467777 67775555666876 89986
No 241
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=22.11 E-value=2.3e+02 Score=30.58 Aligned_cols=74 Identities=27% Similarity=0.498 Sum_probs=44.3
Q ss_pred cCCcEEEEecCCCccCCchhH-HHHHHHHHHhcCCCccccccccccCCeEEEEEEEeCCeEEEEEEcCCcccc-----c-
Q 013142 347 NGIPVWVFSGDQDSVVPLLGS-RTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV-----P- 419 (449)
Q Consensus 347 ~~irVLiy~Gd~D~i~~~~g~-~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~k~~~n~Ltf~~V~~AGHmv-----P- 419 (449)
.|.+.+|++|..|.++|.-.+ +.++.. ... -... ..+ |.|+.|.+|=|+= |
T Consensus 554 ~GKPaIiVhGR~DaLlPvnh~Sr~Y~~l-n~~--~eG~------------------~s~-lrYyeV~naqHfDaf~~~pG 611 (690)
T PF10605_consen 554 HGKPAIIVHGRSDALLPVNHTSRPYLGL-NRQ--VEGR------------------ASR-LRYYEVTNAQHFDAFLDFPG 611 (690)
T ss_pred CCCceEEEecccceecccCCCchHHHHH-hhh--hccc------------------ccc-eeEEEecCCeechhhccCCC
Confidence 378999999999999987554 223221 100 0000 124 9999999998872 2
Q ss_pred ccC---h-----HHHHHHHHHHh-cCCCCCCC
Q 013142 420 YAQ---P-----SRALHLFSSFV-HGRRLPNN 442 (449)
Q Consensus 420 ~dq---P-----~~a~~mi~~fl-~~~~~~~~ 442 (449)
+|. | ..|++++-.+| .|+++|.+
T Consensus 612 ~~~r~VPlh~Y~~qALd~M~a~L~~G~~LPpS 643 (690)
T PF10605_consen 612 FDTRFVPLHPYFFQALDLMWAHLKSGAALPPS 643 (690)
T ss_pred CCcccccccHHHHHHHHHHHHHhhcCCCCCcc
Confidence 111 1 35565554444 56899876
No 242
>PRK11524 putative methyltransferase; Provisional
Probab=22.08 E-value=2.3e+02 Score=27.27 Aligned_cols=62 Identities=11% Similarity=0.417 Sum_probs=33.8
Q ss_pred CCcceEEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHH-CCCCCC-CCeEEEecccccccHHHHH
Q 013142 124 KASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEK-FPEFKS-RELFLTGESYAGHYIPQLA 194 (449)
Q Consensus 124 ~~anlLfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~-fp~~~~-~~~yi~GESYgG~yvP~la 194 (449)
+..++|+.|+|-++|.+|......+ ...+..++|..|+.. ..-++. -.+||. ......+.+.
T Consensus 26 ~siDlIitDPPY~~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~rvLK~~G~i~i~---~~~~~~~~~~ 89 (284)
T PRK11524 26 ESVDLIFADPPYNIGKNFDGLIEAW------KEDLFIDWLYEWIDECHRVLKKQGTMYIM---NSTENMPFID 89 (284)
T ss_pred CcccEEEECCCcccccccccccccc------cHHHHHHHHHHHHHHHHHHhCCCcEEEEE---cCchhhhHHH
Confidence 3589999999998876654322111 123455666666654 223332 347765 2334445443
No 243
>PRK15188 fimbrial chaperone protein BcfB; Provisional
Probab=21.99 E-value=4.6e+02 Score=24.47 Aligned_cols=18 Identities=22% Similarity=0.122 Sum_probs=11.5
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 013142 7 GGFLNISLVVLLLLVSRS 24 (449)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~ 24 (449)
--|||+++++++++++++
T Consensus 6 ~~~~~~~~~l~~a~~~~~ 23 (228)
T PRK15188 6 PIFLRLLLLLSAAGLSFA 23 (228)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 458888877766554433
No 244
>COG5510 Predicted small secreted protein [Function unknown]
Probab=21.59 E-value=93 Score=20.85 Aligned_cols=24 Identities=25% Similarity=0.149 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHhhhhhccCCCCC
Q 013142 13 SLVVLLLLVSRSNVVYVAAFPAED 36 (449)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~ 36 (449)
++..++++.|++|.+|-..+....
T Consensus 7 l~i~~vll~s~llaaCNT~rG~G~ 30 (44)
T COG5510 7 LLIALVLLASTLLAACNTMRGAGK 30 (44)
T ss_pred HHHHHHHHHHHHHHHhhhhhccch
Confidence 444555667888888744443333
No 245
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=21.30 E-value=1.5e+02 Score=27.17 Aligned_cols=54 Identities=11% Similarity=0.049 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCc
Q 013142 154 STARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 223 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~fp~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~ 223 (449)
+.++++.++++ +-+ +... .+-|. |||---|.-+.++..+. ++.|+.+|.+.+++
T Consensus 151 ~~~~~v~~~ir-~~~---~~~~-~~~Il---YGGSV~~~N~~~l~~~~--------~iDG~LvG~Asl~a 204 (205)
T TIGR00419 151 AQPEVVHGSVR-AVK---EVNE-SVRVL---CGAGISTGEDAELAAQL--------GAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHHH-hhh---hhcC-CceEE---EeCCCCHHHHHHHhcCC--------CCCEEEEeeeeecC
Confidence 56777888888 221 1112 22222 99988889888887753 48899999998765
No 246
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=21.20 E-value=2.7e+02 Score=26.09 Aligned_cols=29 Identities=17% Similarity=0.227 Sum_probs=25.9
Q ss_pred cCCcEEEEecCCCccCCchhHHHHHHHHH
Q 013142 347 NGIPVWVFSGDQDSVVPLLGSRTLIRELA 375 (449)
Q Consensus 347 ~~irVLiy~Gd~D~i~~~~g~~~~i~~l~ 375 (449)
-..+||+..|+.|-+||......|-++++
T Consensus 163 vk~Pilfl~ae~D~~~p~~~v~~~ee~lk 191 (242)
T KOG3043|consen 163 VKAPILFLFAELDEDVPPKDVKAWEEKLK 191 (242)
T ss_pred CCCCEEEEeecccccCCHHHHHHHHHHHh
Confidence 36899999999999999999998888854
No 247
>PF02421 FeoB_N: Ferrous iron transport protein B; InterPro: IPR011619 Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system and may play a role in the transport of ferrous iron. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent [].; GO: 0005525 GTP binding, 0015093 ferrous iron transmembrane transporter activity, 0015684 ferrous iron transport, 0016021 integral to membrane; PDB: 3TAH_B 3B1X_A 3SS8_A 3B1W_C 3B1V_A 3LX5_A 3B1Y_A 3LX8_A 3B1Z_A 3K53_B ....
Probab=21.06 E-value=1.3e+02 Score=26.40 Aligned_cols=48 Identities=19% Similarity=0.252 Sum_probs=27.5
Q ss_pred ChhhhhhhhhhccCCceecCCCCceeeccCCcc-CCcceEEEEcCCCccccc
Q 013142 91 GCSSVGGGAFTELGPFYPRGDGRGLRRNSMSWN-KASNLLFVESPAGVGWSY 141 (449)
Q Consensus 91 G~SS~~~g~f~E~GP~~i~~~~~~~~~N~~sW~-~~anlLfIDqPvGtGfSy 141 (449)
|=|++ +-.+..-=...-|-.|.++..+...+. ....+.+||-| |+ ||.
T Consensus 12 GKStL-fN~Ltg~~~~v~n~pG~Tv~~~~g~~~~~~~~~~lvDlP-G~-ysl 60 (156)
T PF02421_consen 12 GKSTL-FNALTGAKQKVGNWPGTTVEKKEGIFKLGDQQVELVDLP-GI-YSL 60 (156)
T ss_dssp SHHHH-HHHHHTTSEEEEESTTSSSEEEEEEEEETTEEEEEEE------SSS
T ss_pred CHHHH-HHHHHCCCceecCCCCCCeeeeeEEEEecCceEEEEECC-Cc-ccC
Confidence 56777 555554333333555666666666666 45889999999 88 554
No 248
>PF00809 Pterin_bind: Pterin binding enzyme This Prosite entry is a subset of the Pfam family; InterPro: IPR000489 The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ]. Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (2.1.1.13 from EC), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier. Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (2.5.1.15 from EC). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate. Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. ; GO: 0042558 pteridine-containing compound metabolic process; PDB: 2VP8_B 2BMB_A 2Y5S_B 2Y5J_A 3BOF_B 1Q7Q_B 1Q85_B 1Q7Z_A 1Q7M_A 1Q8A_B ....
Probab=20.79 E-value=1.6e+02 Score=26.95 Aligned_cols=38 Identities=18% Similarity=0.471 Sum_probs=22.9
Q ss_pred EEEEcCCCccccccCCCCCCccCchhhHHHHHHHHHHHHHHCCCCCCCCeEEEe
Q 013142 129 LFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTG 182 (449)
Q Consensus 129 LfIDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~~~~~yi~G 182 (449)
|++| | |+||+ .+.+.+..+.+.|+.|-..+ +.|+.+.|
T Consensus 166 Ii~D-P-gigf~----------~~~~~~~~~l~~i~~~~~~~----~~p~l~~~ 203 (210)
T PF00809_consen 166 IILD-P-GIGFG----------KDPEQNLELLRNIEELKELF----GYPILVGG 203 (210)
T ss_dssp EEEE-T-TTTSS----------TTHHHHHHHHHTHHHHHTTS----SSEBEEEE
T ss_pred Eeec-c-ccCcC----------CCHHHHHHHHHHHHHHHHhC----CCCEEEEE
Confidence 8999 7 99993 22245556666666655332 34555544
No 249
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=20.34 E-value=65 Score=31.64 Aligned_cols=39 Identities=8% Similarity=0.055 Sum_probs=28.0
Q ss_pred CeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCCcCcccc
Q 013142 177 ELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQD 226 (449)
Q Consensus 177 ~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~id~~~~ 226 (449)
.+-++|||+|| +.+..+... .-.++.-++-|+|+-|..|
T Consensus 242 ~~aViGHSFGg----AT~i~~ss~-------~t~FrcaI~lD~WM~Pl~~ 280 (399)
T KOG3847|consen 242 QAAVIGHSFGG----ATSIASSSS-------HTDFRCAIALDAWMFPLDQ 280 (399)
T ss_pred hhhheeccccc----hhhhhhhcc-------ccceeeeeeeeeeecccch
Confidence 57899999999 444443332 2347888888999999765
No 250
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=20.32 E-value=2.2e+02 Score=26.33 Aligned_cols=106 Identities=23% Similarity=0.308 Sum_probs=53.3
Q ss_pred CeeEEecCCCChhhhhhhhhhccCCcee-------------cCCCCc--eeeccCCcc-CCcceEEEEcCCCccccccCC
Q 013142 81 PLTLWLNGGPGCSSVGGGAFTELGPFYP-------------RGDGRG--LRRNSMSWN-KASNLLFVESPAGVGWSYSNT 144 (449)
Q Consensus 81 PlilWlnGGPG~SS~~~g~f~E~GP~~i-------------~~~~~~--~~~N~~sW~-~~anlLfIDqPvGtGfSy~~~ 144 (449)
=|++=..|-||-..++ |--.|++|..- ..++.. ++---++=+ -..=.+||+ .|=|-
T Consensus 30 ~LTvH~tGN~~~a~~G-G~p~~la~a~P~~~~~~l~~l~~~~~e~y~v~~EaTHHGPt~~~~Ps~FvE----IGSte--- 101 (213)
T PF04414_consen 30 SLTVHTTGNFGEAEYG-GKPGELAPANPRLMKALLRALKKHAPEGYEVSYEATHHGPTDLSVPSVFVE----IGSTE--- 101 (213)
T ss_dssp EEEEE--EESS--TTS-S-TTEE-BB-HHHHHHHHHHHHHHGGCT-EEEE--S-SS-----SBEEEEE----EEESH---
T ss_pred eEEEeCCCCCCccccC-CCCCccccCCHHHHHHHHHHHHHhccCCCEEEEEeeccCCCCCCCCcEEEE----eCCCH---
Confidence 3677888888886665 66666666531 111211 111112222 344567777 33111
Q ss_pred CCCCccCchhhHHHHHHHHHHHHHHCCCCC-CCCeEEEecccccccHHHHHHHHHHh
Q 013142 145 TSDYNCGDASTARDMHVFMMNWYEKFPEFK-SRELFLTGESYAGHYIPQLADVLLDH 200 (449)
Q Consensus 145 ~~~~~~~~~~~A~d~~~fL~~F~~~fp~~~-~~~~yi~GESYgG~yvP~la~~i~~~ 200 (449)
-.++++.+++-+.+.+.+.+..-++-. .+++.-+| ||||+|.+...+++.
T Consensus 102 ---~eW~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 102 ---EEWNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp ---HHHT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred ---HHhCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 135777888888888888877655332 14566677 899999999888764
No 251
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=20.28 E-value=1e+02 Score=29.65 Aligned_cols=59 Identities=19% Similarity=0.196 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHHHHH-CCC---CCCCCeEEEecccccccHHHHHHHHHHhccCCCCceeeeeeeEecCCC
Q 013142 154 STARDMHVFMMNWYEK-FPE---FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 220 (449)
Q Consensus 154 ~~A~d~~~fL~~F~~~-fp~---~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGng~ 220 (449)
+.|..+.++|.+=++. -|+ =+-.++-++|||-||+-+=++|.... ..+++..++-.||+
T Consensus 94 ~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a--------~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 94 KSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA--------TSLKFSALIGIDPV 156 (307)
T ss_pred HHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc--------ccCchhheeccccc
Confidence 4455555555543332 222 12236999999999998777776443 14667777765554
Done!